PSIBLAST alignment of GI: 254781003 and protein with PDB id: 1dnk
>gi|493974|pdb|1DNK|A Chain A, The X-Ray Structure Of The Dnase I-D(Ggtatacc)2 Complex At 2.3 Angstroms Resolution Length = 260
>gi|494766|pdb|2DNJ|A Chain A, Dnase I-Induced Dna Conformation. 2 Angstroms Structure Of A Dnase I-Octamer Complex Length = 260
Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 39/285 (13%), Positives = 91/285 (31%), Gaps = 30/285 (10%)
Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-- 81
+++ ++NI T E + + + + + DIV +QE+ + VA
Sbjct: 1 LKIAAFNIRTFGET---------KMSNATLASYIVRIVRRY--DIVLIQEVRDSHLVAVG 49
Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
K+ + +++ ++ R V VL G + + +
Sbjct: 50 KLLDYLNQDDPNTYHYVVSEPLGRNSYKERYLFLFRPNKVSVLDTYQYDDGCESCGNDSF 109
Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
+R + + K+ I D++ S L Q +W +
Sbjct: 110 SREPAVVKFSSHSTKVKEFAIVALHSAPSDAVAEINSLYDVYLDVQQKWHLN-------- 161
Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
++ GDFN +Y+ ++ + + + + + N D V
Sbjct: 162 --DVMLMGDFNADCSYVTSSQWSSIRLRTSSTFQWLIPDSADTTATSTNCAY----DRIV 215
Query: 262 MDQNAYKF-LIQESFSEILYNEDDIKSR--GKRLSDHCPISIDYD 303
+ + + ++ S + + S +SDH P+ +
Sbjct: 216 VAGSLLQSSVVPGSAAPFDFQAAYGLSNEMALAISDHYPVEVTLT 260