PSIBLAST alignment of GI: 254781003 and protein with PDB id: 2f2f
>gi|93279405|pdb|2F2F|B Chain B, Crystal Structure Of Cytolethal Distending Toxin (Cdt) From Actinobacillus Actinomycetemcomitans Length = 283
>gi|93279408|pdb|2F2F|E Chain E, Crystal Structure Of Cytolethal Distending Toxin (Cdt) From Actinobacillus Actinomycetemcomitans Length = 283
Score = 49.2 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 47/304 (15%), Positives = 83/304 (27%), Gaps = 46/304 (15%)
Query: 8 ALVFFLVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
+ ++ +S A ++ +WN+ S N +RQ
Sbjct: 9 VVFCTMLFSFSSYANLSDFKVATWNLQGSSAVNESKWNIN-----------VRQLLSGEQ 57
Query: 66 -ADIVFLQEM---------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
ADI+ +QE S P + T N + A
Sbjct: 58 GADILMVQEAGSLPSSAVRTSRVIQHGGTPIEEYTWNLGTRSRPNMVYIYYSRLDVGANR 117
Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
V V Q + DS +R AV + + G ++ L +
Sbjct: 118 VNLAIVSRRQADEAFIVHSDSSV-LQSRPAVGIRI---GTDVFFTVHALATGGSD----- 168
Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
+ SL+ + + +++ GDFNR L + N +I
Sbjct: 169 ----AVSLIRNIFTTFTSSPSSPERRGYSWMVVGDFNRAPVNLEAALRQEPAVSENTIII 224
Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
+ R+ +DY ++ Q + SDH
Sbjct: 225 APTE---------PTHRSGNILDYAILHDAHLPRREQARERIGASLMLNQLRSQIT-SDH 274
Query: 296 CPIS 299
P+S
Sbjct: 275 FPVS 278