PSIBLAST alignment of GI: 254781003 and protein with PDB id: 2v0s

>gi|152149539|pdb|2V0S|A Chain A, Crystal Structure Of A Hairpin Exchange Variant (Lr1) Of The Targeting Line-1 Retrotransposon Endonuclease Length = 236
 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/289 (10%), Positives = 72/289 (24%), Gaps = 71/289 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +++ NIN L+              +      L  + K+ D  +  +QE          
Sbjct: 8   ITILTLNINGLN--------------SAIKRHRLASWIKSQDPSVCCIQET--------- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        +      + +       +A+                           
Sbjct: 45  -HLTCRDTHRLKIKGWRKIYQANGKQKKAGVAIL-------VSDKTDFKPTKIKRDKEGH 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   I  +++ +L+I+  +                 + Q    L+  +        
Sbjct: 97  YIM-VKGSIQQEELTILNIYAPNTGAP-----------RFIKQVLSDLQRDLDSH----- 139

Query: 204 PFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRF-PKEKDSRCNANKNLRN 253
             +I GDFN  ++ L  +          +    +   D +  +      S          
Sbjct: 140 -TLIMGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPKSTEYTFSTANG 198

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +  ID+ V  +       +                   LSDH  I ++ 
Sbjct: 199 ESKIDHIVGSKALLSKCKRTEIIT------------NYLSDHSAIKLEL 235