PSIBLAST alignment of GI: 254781003 and protein with PDB id: 3ngq
>gi|301598724|pdb|3NGQ|A Chain A, Crystal Structure Of The Human Cnot6l Nuclease Domain Length = 398
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/345 (10%), Positives = 88/345 (25%), Gaps = 69/345 (20%)
Query: 21 AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
+ ++ +N+ + + ++ + + + N DADI+ LQE+ +
Sbjct: 29 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ 88
Query: 79 AVAKVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
P + S + + V+K V Q
Sbjct: 89 YFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV 148
Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEINGKKI------------WVLDIHLKSFCFLD 171
+ ++ + V +++E++ + +L + +
Sbjct: 149 AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGMKPIHAADKQLLIVANAHMHWDP 208
Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY-------- 217
+ + + + + + + + + +P V+ D N +
Sbjct: 209 EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSN 268
Query: 218 ---LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNK 254
N+ DF + + K+ N K
Sbjct: 269 GGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYTNYTFDFK 328
Query: 255 IPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
IDY + N L ++ N SDH
Sbjct: 329 GVIDYIFYSKTHMNVEGVLGPLDPQWLVENNITGCPHPHIPSDHF 373