HHsearch alignment for GI: 254781004 and conserved domain: COG0017

Probab=96.73  E-value=0.015  Score=37.43  Aligned_cols=112  Identities=17%  Similarity=0.286  Sum_probs=71.9

Q ss_pred             HHHHHHHHHHHHHHH-HCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCHHHHHHHHHHC
Q ss_conf             899999999999887-6896385554324431000112100125554201001456777823774343125777765201
Q gi|254781004|r  273 WKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG  351 (652)
Q Consensus       273 ~~i~~~ie~~ir~~~-~~G~~eV~tP~l~~~~Lw~~SGh~~~y~~~mf~~~~~~~~~~~~~~~~LkPmncp~h~~i~~~~  351 (652)
T Consensus       134 ~kirs~i~~a~~eff~~~gF~eV~tP~i~~~~~E--------Gg~elF~v~yf------~~~a~Lt-----qS~QLyke~  194 (435)
T COG0017         134 FKIRSSILRAIREFFYENGFTEVHTPIITASATE--------GGGELFKVDYF------DKEAYLT-----QSPQLYKEA  194 (435)
T ss_pred             HHHHHHHHHHHHHHHHHCCCEEECCCEEECCCCC--------CCCEEEEEEEC------CCCEEEE-----CCHHHHHHH
T ss_conf             9499999999999997589589659468534789--------98505777506------8566771-----478899999


Q ss_pred             CCCHHHCCHHHHHHEEEECCCCCCCCEEEEECCCCCCCCCE-EECCHHHHHHHHHHHHH
Q ss_conf             22223104320001000127876452000105635334421-01053767887899999
Q gi|254781004|r  352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHN  409 (652)
Q Consensus       352 ~~SYrdLPlrl~e~~~~~R~E~sg~l~GL~R~ReF~~~Dah-~F~~~eq~~~e~~~~~~  409 (652)
T Consensus       195 ~~~a--l-~rVf~igP~FRAE~s~T~R---HL~EF~~ld~Emaf~~~~d~m~l~E~~i~  247 (435)
T COG0017         195 LAAA--L-ERVFTIGPTFRAEKSNTRR---HLSEFWMLDPEMAFADLNDVMDLAEELIK  247 (435)
T ss_pred             HHHH--H-CCEEEECCCEECCCCCCCC---HHHHHHEECCEECCCCHHHHHHHHHHHHH
T ss_conf             9998--5-7648956725547789700---36667330211136768889999999999