HHsearch alignment for GI: 254781004 and conserved domain: COG0173

>COG0173 AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=98.41  E-value=7.9e-07  Score=66.97  Aligned_cols=116  Identities=20%  Similarity=0.330  Sum_probs=78.0

Q ss_pred             HHHHHHHHHHHHHHHHH-CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCHHHHHHHHHH
Q ss_conf             78999999999998876-89638555432443100011210012555420100145677782377434312577776520
Q gi|254781004|r  272 GWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH  350 (652)
Q Consensus       272 G~~i~~~ie~~ir~~~~-~G~~eV~tP~l~~~~Lw~~SGh~~~y~~~mf~~~~~~~~~~~~~~~~LkPmncp~h~~i~~~  350 (652)
T Consensus       140 ~l~lR~kv~~~iR~~ld~~gF~EiETPiLtkSTP-------E-----------------GARDfLVPSRv~~G~FYALPQ  195 (585)
T COG0173         140 NLKLRSKVTKAIRNFLDDQGFLEIETPILTKSTP-------E-----------------GARDFLVPSRVHPGKFYALPQ  195 (585)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC-------C-----------------CCCCCCCCCCCCCCCEEECCC
T ss_conf             9999999999999977654985734674146798-------6-----------------554430134558996530688


Q ss_pred             CCCCHHHCCH-----HHHHHEEEECCCCCCCCEEEEECCCCCCCCCE-EECCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             1222231043-----20001000127876452000105635334421-01053767887899999988766552
Q gi|254781004|r  351 GLKSYRELPV-----RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDF  418 (652)
Q Consensus       351 ~~~SYrdLPl-----rl~e~~~~~R~E~sg~l~GL~R~ReF~~~Dah-~F~~~eq~~~e~~~~~~~~~~v~~~~  418 (652)
T Consensus       196 SPQlfKQLLMvsGfdRYyQIarCFRDEDlRa----DRQPEFTQiD~EmSF~~~edv~~~~E~l~---~~vf~~~  262 (585)
T COG0173         196 SPQLFKQLLMVAGFDRYYQIARCFRDEDLRA----DRQPEFTQIDLEMSFVDEEDVMELIEKLL---RYVFKEV  262 (585)
T ss_pred             CHHHHHHHHHHHCCCCEEEEEEEECCCCCCC----CCCCCCEEEEEEEECCCHHHHHHHHHHHH---HHHHHHH
T ss_conf             8799999998805330023565404664444----46875336767764388999999999999---9999985