HHsearch alignment for GI: 254781004 and conserved domain: COG0173
>COG0173 AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=98.41 E-value=7.9e-07 Score=66.97 Aligned_cols=116 Identities=20% Similarity=0.330 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHHHHH-CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCHHHHHHHHHH
Q ss_conf 78999999999998876-89638555432443100011210012555420100145677782377434312577776520
Q gi|254781004|r 272 GWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350 (652)
Q Consensus 272 G~~i~~~ie~~ir~~~~-~G~~eV~tP~l~~~~Lw~~SGh~~~y~~~mf~~~~~~~~~~~~~~~~LkPmncp~h~~i~~~ 350 (652)
T Consensus 140 ~l~lR~kv~~~iR~~ld~~gF~EiETPiLtkSTP-------E-----------------GARDfLVPSRv~~G~FYALPQ 195 (585)
T COG0173 140 NLKLRSKVTKAIRNFLDDQGFLEIETPILTKSTP-------E-----------------GARDFLVPSRVHPGKFYALPQ 195 (585)
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC-------C-----------------CCCCCCCCCCCCCCCEEECCC
T ss_conf 9999999999999977654985734674146798-------6-----------------554430134558996530688
Q ss_pred CCCCHHHCCH-----HHHHHEEEECCCCCCCCEEEEECCCCCCCCCE-EECCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 1222231043-----20001000127876452000105635334421-01053767887899999988766552
Q gi|254781004|r 351 GLKSYRELPV-----RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDF 418 (652)
Q Consensus 351 ~~~SYrdLPl-----rl~e~~~~~R~E~sg~l~GL~R~ReF~~~Dah-~F~~~eq~~~e~~~~~~~~~~v~~~~ 418 (652)
T Consensus 196 SPQlfKQLLMvsGfdRYyQIarCFRDEDlRa----DRQPEFTQiD~EmSF~~~edv~~~~E~l~---~~vf~~~ 262 (585)
T COG0173 196 SPQLFKQLLMVAGFDRYYQIARCFRDEDLRA----DRQPEFTQIDLEMSFVDEEDVMELIEKLL---RYVFKEV 262 (585)
T ss_pred CHHHHHHHHHHHCCCCEEEEEEEECCCCCCC----CCCCCCEEEEEEEECCCHHHHHHHHHHHH---HHHHHHH
T ss_conf 8799999998805330023565404664444----46875336767764388999999999999---9999985