HHsearch alignment for GI: 254781004 and conserved domain: PRK00252
>PRK00252 alaS alanyl-tRNA synthetase; Reviewed.
Probab=99.59 E-value=4.9e-14 Score=116.68 Aligned_cols=135 Identities=26% Similarity=0.483 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEE-EEECCC-CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
Q ss_conf 99998999999999997799889-972435-8855788408888889899999999999996699804853276785445
Q gi|254781004|r 72 VIRHSCAHIMAEAVQSIWPEVQV-AIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL 149 (652)
Q Consensus 72 i~~hS~ahlL~~Av~~l~p~~kl-~igp~i-~~GfYyD~~~~~~it~~dl~~Ie~~M~~ii~~~~pi~r~~vs~~eA~~~ 149 (652)
T Consensus 550 ~~nHTatHlL~~alr~vlG~-hv~Q~GS~v~~~~lrfDfsh~~~lt~eel~~iE~~vN~~I~~n~~V~~~~~~~~eA~~~ 628 (864)
T PRK00252 550 ARNHSATHLLHAALRQVLGE-HVTQKGSLVAPDRLRFDFSHFEALTPEELRQVEDLVNEQIRENLPVETEEMDIEEAKKM 628 (864)
T ss_pred HHHCHHHHHHHHHHHHHHCC-CEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHH
T ss_conf 86357999999999998487-70866633577607997316888999999999999999999679658985698999752
Q ss_pred H--HHCCCHHHHHHHHHCCCCCCCEEECCCCC-EEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEE
Q ss_conf 4--41671135566542034554213025752-0100023552144422233333321110157756420689999983
Q gi|254781004|r 150 F--ESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAW 225 (652)
Q Consensus 150 F--~~~~~~~K~~li~~~~~~~~v~~y~~g~~-~Dlc~GphvpsTg~ik~~fkL~~~sgayw~gd~~~~~l~Riyg~af 225 (652)
T Consensus 629 ga~alfgekY----------~d~VRVV~ig~~s~ElCGGTHv~~TgeIg~-~kI~~e~~i-------~~GvrRIeavtG 689 (864)
T PRK00252 629 GAMALFGEKY----------GDEVRVVSMGDFSIELCGGTHVSNTGDIGL-FKIVSESGV-------AAGVRRIEAVTG 689 (864)
T ss_pred CHHHHCCCCC----------CCEEEEEEECCEEEECCCCCCCCCCCEEEE-EEEEEECCC-------CCCCEEEEEEEC
T ss_conf 3121014214----------880699998992685678988997052354-999984563-------588179999715