HHsearch alignment for GI: 254781004 and conserved domain: PRK09350

Probab=98.40  E-value=1.6e-06  Score=64.89  Aligned_cols=126  Identities=15%  Similarity=0.155  Sum_probs=77.4

Q ss_pred             EEECCH----HHHHHHHHHHHHHHH-HCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCH
Q ss_conf             650107----899999999999887-689638555432443100011210012555420100145677782377434312
Q gi|254781004|r  267 FWHRKG----WKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC  341 (652)
Q Consensus       267 ~wlP~G----~~i~~~ie~~ir~~~-~~G~~eV~tP~l~~~~Lw~~SGh~~~y~~~mf~~~~~~~~~~~~~~~~LkPmnc  341 (652)
T Consensus         6 ~w~~~as~~~l~~Rs~i~~~iR~ff~~~gFlEVeTP~L~~~t~--~~~~~~~f~~~~~~~~-----~~~~~~~yL~~SP-   77 (325)
T PRK09350          6 SWQPSASIKNLLKRAAIIAEIRRFFADRGVLEVETPAMSQATV--TDIHLVPFETRFVGPG-----HSQGKTLWLMTSP-   77 (325)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC--CCCCCCCEEEECCCCC-----CCCCCCEEEECCH-
T ss_conf             7777147999999999999999999988968977984257788--7646762221025655-----4567664550791-


Q ss_pred             HHHHHHHHHCC-CCHHHCCHHHHHHEEEECCCCCCCCEEEEECCCCCCCCCE-EECCHHHHHHHHHHHHHHH
Q ss_conf             57777652012-2223104320001000127876452000105635334421-0105376788789999998
Q gi|254781004|r  342 PGHVAVFNHGL-KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNLI  411 (652)
Q Consensus       342 p~h~~i~~~~~-~SYrdLPlrl~e~~~~~R~E~sg~l~GL~R~ReF~~~Dah-~F~~~eq~~~e~~~~~~~~  411 (652)
T Consensus        78 ----ql~~k~l~~~G--~-~rvfqI~~~FR~E~~~~----~H~pEFtmlE~~~~~~d~~d~m~~~e~ll~~~  138 (325)
T PRK09350         78 ----EYHMKRLLAAG--S-GPIFQLCRSFRNEEAGR----YHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQV  138 (325)
T ss_pred             ----HHHHHHHHHCC--C-CCEEEEEHHHCCCCCCC----CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf             ----99999998667--8-85589611322899987----65737788899981548999999999999999