PSIBLAST alignment of GI: 254781004 and protein with PDB id: 1nyq
gi|38492559|pdb|1NYQ|A Chain A, Structure Of Staphylococcus Aureus Threonyl-Trna Synthetase Complexed With An Analogue Of Threonyl Adenylate Length = 645
>gi|38492560|pdb|1NYQ|B Chain B, Structure Of Staphylococcus Aureus Threonyl-Trna Synthetase Complexed With An Analogue Of Threonyl Adenylate Length = 645
Score = 615 bits (1585), Expect = e-174, Method: Composition-based stats.
Identities = 268/654 (40%), Positives = 403/654 (61%), Gaps = 21/654 (3%)
Query: 3 SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
I + FPDG+ K F T D+A+SIS L KKAVA NG++ DL+ P+ +GSIEI
Sbjct: 2 EQINIQFPDGNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIEI 61
Query: 62 ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
+TP +L V+RHS AH+MA A++ ++ V+ +GP+IE GFYYDFD +Q SSD+ Q
Sbjct: 62 VTPGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGGFYYDFDIDQNISSDDFEQ 121
Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
IEK M++I+ + ++ +S ++A+ELF + YK+E++++IP ENVTLY QG++ D
Sbjct: 122 IEKTMKQIVNENMKIERKVVSRDEAKELF--SNDEYKLELIDAIPEDENVTLYSQGDFTD 179
Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
LCRG HV ST ++K FKL+ AGAYWRGDSN ML RIYGTA+ ++EL +L LEE
Sbjct: 180 LCRGVHVPSTAKIK-EFKLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQMLEER 238
Query: 242 EKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
++RDHRK+ +E++LF ++ G+G+ W G I + + Y+ +++ Y+ + TP +
Sbjct: 239 KERDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVL 298
Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
+ L++ SGHWD Y+ +MF D + + L+PMNCP H+ ++ + SYRELP
Sbjct: 299 ANVDLYKTSGHWDHYQEDMFPPMQLD----ETESMVLRPMNCPHHMMIYANKPHSYRELP 354
Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
+R+AE G+++R E SG++ GL RVRG T +D+H+F +Q+ E ++ N+II +YKDFG
Sbjct: 355 IRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFG 414
Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
FE +LS R K D +W+ AEN++K D + S ++ I GE AFY
Sbjct: 415 FEDYSFRLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAI------GEAAFY 468
Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
GPK + +K A+G++ T Q+DF LP RF+ Y+ E PV+IHR V ++ERF+
Sbjct: 469 GPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFV 528
Query: 536 GIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
+ E KG P WL+P Q + + +YA+++ + LKS + + D RNE + YK
Sbjct: 529 AFLTEETKGAFPTWLAPKQVQIIPVNVDLHYDYARQLQDELKSQGVRVSIDDRNEKMGYK 588
Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
IRE ++KIP I+ GDKE + +R++GS + V + I L E
Sbjct: 589 IREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFIWNLVDEIRLK 642