PSIBLAST alignment of GI: 254781004 and protein with PDB id: 1qf6

gi|5107656|pdb|1QF6|A Chain A, Structure Of E. Coli Threonyl-Trna Synthetase Complexed With Its Cognate Trna Length = 642
 Score =  641 bits (1652), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/655 (45%), Positives = 431/655 (65%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  SIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGE 178
             +EK+M E+  ++   +K+ +S  +ARE F ++ E+YKV IL+   A ++   LY   E
Sbjct: 118 EALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YVDMCRGPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K  +  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF          + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTT------SSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q ++  IT S  EY  E+   L +  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + + I  L +E      ++
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQ 639