BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254781006|ref|YP_003065419.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Liberibacter asiaticus str. psy62] (125 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780845|ref|YP_003065258.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Liberibacter asiaticus str. psy62] gi|254780964|ref|YP_003065377.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Liberibacter asiaticus str. psy62] gi|254040522|gb|ACT57318.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Liberibacter asiaticus str. psy62] gi|254040641|gb|ACT57437.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Liberibacter asiaticus str. psy62] Length = 352 Score = 268 bits (684), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 125/125 (100%), Positives = 125/125 (100%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL Sbjct: 228 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 287 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA Sbjct: 288 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 347 Query: 121 ELKWD 125 ELKWD Sbjct: 348 ELKWD 352 >gi|254780136|ref|YP_003064549.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Liberibacter asiaticus str. psy62] gi|254781006|ref|YP_003065419.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Liberibacter asiaticus str. psy62] gi|254039813|gb|ACT56609.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Liberibacter asiaticus str. psy62] gi|254040683|gb|ACT57479.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Liberibacter asiaticus str. psy62] Length = 125 Score = 265 bits (677), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 125/125 (100%), Positives = 125/125 (100%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL Sbjct: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA Sbjct: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 Query: 121 ELKWD 125 ELKWD Sbjct: 121 ELKWD 125 >gi|315122301|ref|YP_004062790.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495703|gb|ADR52302.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 372 Score = 209 bits (531), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 94/125 (75%), Positives = 109/125 (87%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDES+HLNFGID+INQIKIENPHLWT++FQQ+ R ML EA LLE+AY +TMPK F+G+ Sbjct: 248 MRDESVHLNFGIDMINQIKIENPHLWTEDFQQEVRKMLQEAALLEVAYGKDTMPKPFLGI 307 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CE+YM FI NRRC QIGL+P+F+ TENPFPWMSEVIDL+KEKNFFETRVTEYQ+G Sbjct: 308 NANLCEKYMYFITNRRCTQIGLDPVFEKTENPFPWMSEVIDLQKEKNFFETRVTEYQKGT 367 Query: 121 ELKWD 125 L WD Sbjct: 368 SLDWD 372 >gi|209885874|ref|YP_002289731.1| ribonucleoside-diphosphate reductase, beta subunit [Oligotropha carboxidovorans OM5] gi|209874070|gb|ACI93866.1| ribonucleoside-diphosphate reductase, beta subunit [Oligotropha carboxidovorans OM5] Length = 377 Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 92/125 (73%), Positives = 102/125 (81%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+ENPHLWTK FQ + R M+ EA LE AY +TMP+GF+GL Sbjct: 253 LRDESIHLNFGIDVINQIKLENPHLWTKAFQDEVRGMISEAAGLEAAYGRDTMPRGFLGL 312 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CEQYM FIANRRC QIGL P+F TENPFPWMSE +DLKKEKNFFETRV EYQ G Sbjct: 313 NAALCEQYMHFIANRRCAQIGLAPVFAETENPFPWMSEAMDLKKEKNFFETRVIEYQNGG 372 Query: 121 ELKWD 125 L WD Sbjct: 373 ALSWD 377 >gi|256377255|ref|YP_003100915.1| ribonucleoside-diphosphate reductase [Actinosynnema mirum DSM 43827] gi|255921558|gb|ACU37069.1| Ribonucleoside-diphosphate reductase [Actinosynnema mirum DSM 43827] Length = 358 Score = 202 bits (514), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 91/125 (72%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID INQIKIENPHLW + FQ + RTML EA LEIAY +TMP G +GL Sbjct: 234 LRDESIHLNFGIDAINQIKIENPHLWGEAFQAEVRTMLAEACELEIAYGRDTMPNGLLGL 293 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CEQYM+FI NRRC Q+GLEP+F TENPFPWMSE +DLKKEKNFFETRVTEY G Sbjct: 294 NAELCEQYMRFITNRRCAQLGLEPVFAATENPFPWMSEAVDLKKEKNFFETRVTEYASGG 353 Query: 121 ELKWD 125 L WD Sbjct: 354 TLDWD 358 >gi|134097869|ref|YP_001103530.1| ribonucleotide-diphosphate reductase subunit beta [Saccharopolyspora erythraea NRRL 2338] gi|291007412|ref|ZP_06565385.1| ribonucleotide-diphosphate reductase subunit beta [Saccharopolyspora erythraea NRRL 2338] gi|133910492|emb|CAM00605.1| ribonucleoside-diphosphate reductase, beta subunit [Saccharopolyspora erythraea NRRL 2338] Length = 360 Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 90/125 (72%), Positives = 103/125 (82%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID INQIKIENPHLWT EFQ++ RTML EA LE+AY +TMP+G +GL Sbjct: 236 LRDESIHLNFGIDCINQIKIENPHLWTPEFQEEVRTMLTEACELEVAYGRDTMPRGILGL 295 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CE+YM+FI NRRC Q+GLEP+F T NPFPWMSE +DLKKEKNFFETRV EYQ G Sbjct: 296 NAGLCEEYMRFITNRRCAQLGLEPVFPETANPFPWMSEAMDLKKEKNFFETRVIEYQSGG 355 Query: 121 ELKWD 125 L WD Sbjct: 356 ALDWD 360 >gi|226227154|ref|YP_002761260.1| ribonucleoside-diphosphate reductase beta subunit [Gemmatimonas aurantiaca T-27] gi|226090345|dbj|BAH38790.1| ribonucleoside-diphosphate reductase beta subunit [Gemmatimonas aurantiaca T-27] Length = 371 Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 89/125 (71%), Positives = 102/125 (81%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+ENPHLW+ FQ++ R ML EA LE+AY +TMP+GF+GL Sbjct: 247 LRDESIHLNFGIDVINQIKVENPHLWSAAFQEEVRQMLAEACELEVAYGRDTMPRGFLGL 306 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CE YM FI NRRC Q+GL P+F T+NPFPWMSE IDLKKEKNFFETRV EYQ G Sbjct: 307 NAALCETYMHFITNRRCAQLGLAPVFPETDNPFPWMSEAIDLKKEKNFFETRVIEYQNGG 366 Query: 121 ELKWD 125 LKWD Sbjct: 367 ALKWD 371 >gi|110635036|ref|YP_675244.1| ribonucleotide-diphosphate reductase subunit beta [Mesorhizobium sp. BNC1] gi|110286020|gb|ABG64079.1| ribonucleotide reductase [Chelativorans sp. BNC1] Length = 369 Score = 200 bits (509), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 91/125 (72%), Positives = 102/125 (81%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK ENPHLWT EFQ++ R ML +A LE AY +TMP+GF+GL Sbjct: 245 LRDESIHLNFGIDVINQIKHENPHLWTPEFQEELRRMLKDAAELEAAYGRDTMPRGFLGL 304 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CEQYM FIANRRC Q+GL P+F TENPFPWMSE +DLKKEKNFFETRV EYQ G Sbjct: 305 NAGQCEQYMHFIANRRCAQLGLPPVFPETENPFPWMSEAMDLKKEKNFFETRVIEYQNGG 364 Query: 121 ELKWD 125 L WD Sbjct: 365 ALSWD 369 >gi|72163401|ref|YP_291058.1| ribonucleotide-diphosphate reductase subunit beta [Thermobifida fusca YX] gi|71917133|gb|AAZ57035.1| ribonucleoside-diphosphate reductase [Thermobifida fusca YX] Length = 354 Score = 199 bits (507), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 91/125 (72%), Positives = 104/125 (83%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLWT+EFQ + RTML EA LE AY ETMP+G +GL Sbjct: 230 LRDESIHLNFGIDVINQIKIENPHLWTEEFQDEVRTMLIEACELEAAYGRETMPRGILGL 289 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CEQYM+FI +RR Q+GL P+F TENPFPWMSE++DLKKEKNFFETRV EYQ G+ Sbjct: 290 NAKLCEQYMRFITDRRAEQLGLAPIFGETENPFPWMSEMMDLKKEKNFFETRVIEYQTGS 349 Query: 121 ELKWD 125 L WD Sbjct: 350 GLSWD 354 >gi|92119123|ref|YP_578852.1| ribonucleotide-diphosphate reductase subunit beta [Nitrobacter hamburgensis X14] gi|91802017|gb|ABE64392.1| Ribonucleoside-diphosphate reductase [Nitrobacter hamburgensis X14] Length = 416 Score = 199 bits (507), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 88/125 (70%), Positives = 100/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW+K FQ++ R ML A LE AY +TMP+GF+GL Sbjct: 292 LRDESIHLNFGIDVINQIKIENPHLWSKPFQEEVRAMLKNAAELEAAYGRDTMPRGFLGL 351 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CEQYM IANRRC Q+GL P+F +NPFPWMSE +DLKKEKNFFETRV EYQ G Sbjct: 352 NAALCEQYMHVIANRRCAQLGLAPVFAEADNPFPWMSEAMDLKKEKNFFETRVIEYQNGG 411 Query: 121 ELKWD 125 L WD Sbjct: 412 ALAWD 416 >gi|85714830|ref|ZP_01045816.1| ribonucleotide reductase [Nitrobacter sp. Nb-311A] gi|85698316|gb|EAQ36187.1| ribonucleotide reductase [Nitrobacter sp. Nb-311A] Length = 389 Score = 199 bits (505), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 89/125 (71%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLWTK FQ + R ML A LE AY +TMP+GF+GL Sbjct: 265 LRDESIHLNFGIDVINQIKIENPHLWTKTFQDEVRAMLKNAAELEAAYGRDTMPRGFLGL 324 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CE YM IANRRC Q+GL P+F T+NPFPWMSE +DLKKEKNFFETRV EYQ G Sbjct: 325 NAALCETYMHVIANRRCAQLGLAPVFAETDNPFPWMSEAMDLKKEKNFFETRVIEYQNGG 384 Query: 121 ELKWD 125 L WD Sbjct: 385 ALAWD 389 >gi|299134880|ref|ZP_07028072.1| Ribonucleoside-diphosphate reductase [Afipia sp. 1NLS2] gi|298590690|gb|EFI50893.1| Ribonucleoside-diphosphate reductase [Afipia sp. 1NLS2] Length = 373 Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 89/125 (71%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+EN HLWTK FQ+ R M+ +A LE AY +TMP+GF+GL Sbjct: 249 LRDESIHLNFGIDVINQIKLENQHLWTKAFQEDVRGMIRDAAELEAAYGRDTMPRGFLGL 308 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CEQYM FIANRRC QIGL P+F TENPFPWMSE +DLKKEKNFFETRV EYQ G Sbjct: 309 NAALCEQYMHFIANRRCAQIGLTPVFPETENPFPWMSEAMDLKKEKNFFETRVIEYQNGG 368 Query: 121 ELKWD 125 L W+ Sbjct: 369 ALSWE 373 >gi|90425007|ref|YP_533377.1| ribonucleotide-diphosphate reductase subunit beta [Rhodopseudomonas palustris BisB18] gi|90107021|gb|ABD89058.1| Ribonucleoside-diphosphate reductase [Rhodopseudomonas palustris BisB18] Length = 386 Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 89/125 (71%), Positives = 100/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENP LWT FQ++ R ML EA LE AY+ +TMP+GF+GL Sbjct: 262 LRDESIHLNFGIDVINQIKIENPKLWTAGFQEELRGMLQEAAELEAAYSRDTMPRGFLGL 321 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CEQYM FI NRRC Q+GL P+F ENPFPWMSE +DLKKEKNFFETRV EYQ G Sbjct: 322 NAALCEQYMHFITNRRCAQLGLAPIFAEVENPFPWMSETMDLKKEKNFFETRVIEYQNGG 381 Query: 121 ELKWD 125 L WD Sbjct: 382 ALTWD 386 >gi|324998522|ref|ZP_08119634.1| ribonucleoside-diphosphate reductase beta chain [Pseudonocardia sp. P1] Length = 358 Score = 197 bits (501), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 87/125 (69%), Positives = 103/125 (82%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID INQIKIENPHLWT+EF + R MLHEA LE+AYA +TMP+G +GL Sbjct: 234 LRDESIHLNFGIDCINQIKIENPHLWTEEFAAEIRAMLHEACELEVAYARDTMPRGMLGL 293 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A SCEQY++FI +RR QIGL PLF +NPFPWMSE +DL+KEKNFFETRVTEY+ G Sbjct: 294 TAESCEQYLRFITDRRAEQIGLAPLFGQADNPFPWMSEAMDLRKEKNFFETRVTEYRTGG 353 Query: 121 ELKWD 125 L+WD Sbjct: 354 SLEWD 358 >gi|115525181|ref|YP_782092.1| ribonucleotide reductase [Rhodopseudomonas palustris BisA53] gi|115519128|gb|ABJ07112.1| ribonucleotide reductase [Rhodopseudomonas palustris BisA53] Length = 223 Score = 196 bits (497), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 88/125 (70%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENP LWT FQ++ R ML EA LE AY +TMP+GF GL Sbjct: 99 LRDESIHLNFGIDIINQIKIENPELWTAGFQEELRGMLREAAELEAAYCRDTMPRGFFGL 158 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CEQYM FI NRRC Q+GL P+F ENPFPWMSE +DLKKEKNFFETRV EYQ G Sbjct: 159 NAALCEQYMHFITNRRCAQLGLAPIFAEVENPFPWMSETMDLKKEKNFFETRVIEYQNGG 218 Query: 121 ELKWD 125 L WD Sbjct: 219 ALTWD 223 >gi|75677068|ref|YP_319489.1| ribonucleotide-diphosphate reductase subunit beta [Nitrobacter winogradskyi Nb-255] gi|74421938|gb|ABA06137.1| ribonucleotide reductase [Nitrobacter winogradskyi Nb-255] Length = 391 Score = 195 bits (495), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 86/125 (68%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLW+K FQ++ R ML A LE AY +TMP+GF+GL Sbjct: 267 LRDESIHLNFGIDIINQIKIENPHLWSKPFQEEVRAMLKNAADLEAAYGRDTMPRGFLGL 326 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CE YM IANRRC Q+GL P+F +NPFPWMSE +DLKKEKNFFETRV EYQ G Sbjct: 327 NATLCETYMHVIANRRCAQLGLAPVFPDADNPFPWMSEAMDLKKEKNFFETRVIEYQNGG 386 Query: 121 ELKWD 125 L WD Sbjct: 387 ALAWD 391 >gi|297563527|ref|YP_003682501.1| ribonucleoside-diphosphate reductase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847975|gb|ADH69995.1| Ribonucleoside-diphosphate reductase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 360 Score = 195 bits (495), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 88/125 (70%), Positives = 102/125 (81%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW++EFQ + R ML EA LE+AY ETMP+G +GL Sbjct: 236 LRDESIHLNFGIDVINQIKIENPHLWSEEFQAEVRQMLTEACELEVAYGRETMPRGVLGL 295 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CE+YM FI +RR QIGL P+F TENPFPWMSE++DL+KEKNFFETRV EYQ G Sbjct: 296 NAELCEKYMHFITDRRAEQIGLAPIFGETENPFPWMSEMMDLQKEKNFFETRVIEYQTGG 355 Query: 121 ELKWD 125 L WD Sbjct: 356 GLDWD 360 >gi|261855609|ref|YP_003262892.1| ribonucleoside-diphosphate reductase [Halothiobacillus neapolitanus c2] gi|261836078|gb|ACX95845.1| Ribonucleoside-diphosphate reductase [Halothiobacillus neapolitanus c2] Length = 398 Score = 194 bits (493), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 88/124 (70%), Positives = 100/124 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDES+H+NFGIDVINQIKIENPHLWT++F+ + ML EA LEIAYA +TMP G +GL Sbjct: 275 MRDESIHMNFGIDVINQIKIENPHLWTEDFKAEVTRMLKEAAELEIAYARDTMPHGLLGL 334 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA C +Y+ FIANRRC+QIGL LF NPFPWMSEVIDLKKEKNFFETRVT+YQ G Sbjct: 335 NAEMCAEYLHFIANRRCNQIGLAELFPGATNPFPWMSEVIDLKKEKNFFETRVTDYQTGG 394 Query: 121 ELKW 124 L W Sbjct: 395 ALNW 398 >gi|257055668|ref|YP_003133500.1| ribonucleotide reductase, beta subunit [Saccharomonospora viridis DSM 43017] gi|256585540|gb|ACU96673.1| ribonucleotide reductase, beta subunit [Saccharomonospora viridis DSM 43017] Length = 349 Score = 194 bits (492), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 87/125 (69%), Positives = 103/125 (82%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFG+D INQIK ENPHLWT EFQQ+ R ML EA LE+AYAH+TMP+ +GL Sbjct: 225 LRDESIHLNFGVDCINQIKAENPHLWTPEFQQQVRDMLVEACELEVAYAHDTMPRPMLGL 284 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A CEQYM FI +RR Q+GL+P+F ENPFPWMSEVIDL+KEKNFFETRVT+Y+ GA Sbjct: 285 SAELCEQYMHFITDRRAAQLGLDPVFGERENPFPWMSEVIDLRKEKNFFETRVTDYRSGA 344 Query: 121 ELKWD 125 L WD Sbjct: 345 ALAWD 349 >gi|300784783|ref|YP_003765074.1| ribonucleoside-diphosphate reductase beta chain [Amycolatopsis mediterranei U32] gi|299794297|gb|ADJ44672.1| ribonucleoside-diphosphate reductase beta chain [Amycolatopsis mediterranei U32] Length = 357 Score = 194 bits (492), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 87/125 (69%), Positives = 100/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID INQIKIENPHLWT+EFQ + R ML EA LE+ YA +TMP+G +GL Sbjct: 233 LRDESIHLNFGIDCINQIKIENPHLWTEEFQAEVRGMLKEACELEVKYARDTMPRGMLGL 292 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A CEQYM F+ +RR QIGL P+F TENPFPWMSE +DLKKEKNFFETRV EYQ G Sbjct: 293 SAQLCEQYMHFVTDRRAQQIGLAPIFGETENPFPWMSEAMDLKKEKNFFETRVIEYQSGG 352 Query: 121 ELKWD 125 L WD Sbjct: 353 ALDWD 357 >gi|302525965|ref|ZP_07278307.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces sp. AA4] gi|302434860|gb|EFL06676.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces sp. AA4] Length = 357 Score = 191 bits (485), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 86/125 (68%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID INQIKIENPHLWT+EFQ + R ML EA LE+ YA +TMP+G +GL Sbjct: 233 LRDESIHLNFGIDCINQIKIENPHLWTEEFQAEVRGMLQEACELEVKYARDTMPRGMLGL 292 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A CEQYM FI +RR QIGL P++ ENPFPWMSE +DLKKEKNFFETRV EYQ G Sbjct: 293 SADLCEQYMHFITDRRAQQIGLPPIYGENENPFPWMSEAMDLKKEKNFFETRVIEYQSGG 352 Query: 121 ELKWD 125 L WD Sbjct: 353 ALDWD 357 >gi|300113307|ref|YP_003759882.1| ribonucleoside-diphosphate reductase [Nitrosococcus watsonii C-113] gi|299539244|gb|ADJ27561.1| Ribonucleoside-diphosphate reductase [Nitrosococcus watsonii C-113] Length = 412 Score = 191 bits (484), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 85/125 (68%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDES+H+NFGIDVINQIK+ENPHLW+ F+Q++ M+ EA LE YAH+TMP+G +GL Sbjct: 288 MRDESMHMNFGIDVINQIKLENPHLWSDSFKQETLRMIQEAVSLETQYAHDTMPRGVLGL 347 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP E+Y++FIANRRC QIGL + NPFPWMSEV+DLKKEKNFFETRVTEYQ G Sbjct: 348 NAPMFEEYLKFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 407 Query: 121 ELKWD 125 L WD Sbjct: 408 ALSWD 412 >gi|292490774|ref|YP_003526213.1| ribonucleoside-diphosphate reductase [Nitrosococcus halophilus Nc4] gi|291579369|gb|ADE13826.1| Ribonucleoside-diphosphate reductase [Nitrosococcus halophilus Nc4] Length = 415 Score = 191 bits (484), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 85/125 (68%), Positives = 102/125 (81%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDES+H+NFGIDVINQIKIENPHLWT F+Q++ M+ EA LE YA++TMP+G +GL Sbjct: 291 MRDESMHMNFGIDVINQIKIENPHLWTDSFKQETIQMIREAVSLETQYAYDTMPRGVLGL 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP ++Y++FIANRRC QIGL + NPFPWMSE++DLKKEKNFFETRVTEYQ G Sbjct: 351 NAPMFDEYLKFIANRRCAQIGLPEQYPGASNPFPWMSEILDLKKEKNFFETRVTEYQTGG 410 Query: 121 ELKWD 125 LKWD Sbjct: 411 ALKWD 415 >gi|77165986|ref|YP_344511.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosococcus oceani ATCC 19707] gi|254436303|ref|ZP_05049809.1| ribonucleoside-diphosphate reductase, beta subunit [Nitrosococcus oceani AFC27] gi|76884300|gb|ABA58981.1| Ribonucleoside-diphosphate reductase [Nitrosococcus oceani ATCC 19707] gi|207087993|gb|EDZ65266.1| ribonucleoside-diphosphate reductase, beta subunit [Nitrosococcus oceani AFC27] Length = 412 Score = 191 bits (484), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 85/125 (68%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDES+H+NFGIDVINQIK+ENPHLW+ F+Q++ M+ EA LE YAH+TMP+G +GL Sbjct: 288 MRDESMHMNFGIDVINQIKLENPHLWSDSFKQETLRMIQEAVSLETQYAHDTMPRGVLGL 347 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP E+Y++FIANRRC QIGL + NPFPWMSEV+DLKKEKNFFETRVTEYQ G Sbjct: 348 NAPMFEEYLKFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 407 Query: 121 ELKWD 125 L WD Sbjct: 408 ALSWD 412 >gi|192291019|ref|YP_001991624.1| ribonucleotide-diphosphate reductase subunit beta [Rhodopseudomonas palustris TIE-1] gi|192284768|gb|ACF01149.1| Ribonucleoside-diphosphate reductase [Rhodopseudomonas palustris TIE-1] Length = 373 Score = 190 bits (482), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 84/125 (67%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+EN +WT FQ R M+H+A LE AY +TMP G +GL Sbjct: 249 LRDESIHLNFGIDVINQIKLENAAVWTASFQDDIRGMIHDAAELEAAYGRDTMPHGLLGL 308 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CE YM FIANRRC Q+GL P+F T+NPFPWMSE +DLKKEKNFFETRV EYQ G Sbjct: 309 NAALCESYMHFIANRRCVQLGLRPVFAETDNPFPWMSETMDLKKEKNFFETRVIEYQNGG 368 Query: 121 ELKWD 125 L WD Sbjct: 369 ALDWD 373 >gi|220935777|ref|YP_002514676.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp. HL-EbGR7] gi|219997087|gb|ACL73689.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp. HL-EbGR7] Length = 408 Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 83/125 (66%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIK+ENPHLWT F+++ RTM+ +A LE YA +TMP+G +G+ Sbjct: 284 LRDESMHMNFGIDVINQIKVENPHLWTAAFKEEMRTMIRDAVELEAQYARDTMPRGVLGM 343 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+ FIANRRC QIGL ++ ENPFPWMSEV+DLKKEKNFFETRVTEYQ G Sbjct: 344 NAAMFEEYLHFIANRRCAQIGLAEIYPGAENPFPWMSEVLDLKKEKNFFETRVTEYQTGG 403 Query: 121 ELKWD 125 L WD Sbjct: 404 ALSWD 408 >gi|300022335|ref|YP_003754946.1| ribonucleoside-diphosphate reductase [Hyphomicrobium denitrificans ATCC 51888] gi|299524156|gb|ADJ22625.1| Ribonucleoside-diphosphate reductase [Hyphomicrobium denitrificans ATCC 51888] Length = 374 Score = 187 bits (476), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 85/125 (68%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK EN HLW+K FQ + R ML +A LE AY +TMP G +GL Sbjct: 250 LRDESIHLNFGIDVINQIKAENAHLWSKAFQDEVRGMLRDAAQLEAAYGRDTMPTGLLGL 309 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 N EQYM+FIANRRC Q+GL P+FK ENPFPWMSE +DLKKEKNFFETRV EYQ G Sbjct: 310 NPGLTEQYMEFIANRRCAQLGLTPVFKDRENPFPWMSEAMDLKKEKNFFETRVIEYQNGG 369 Query: 121 ELKWD 125 L W+ Sbjct: 370 ALSWE 374 >gi|114321252|ref|YP_742935.1| ribonucleotide-diphosphate reductase subunit beta [Alkalilimnicola ehrlichii MLHE-1] gi|114227646|gb|ABI57445.1| Ribonucleoside-diphosphate reductase [Alkalilimnicola ehrlichii MLHE-1] Length = 354 Score = 187 bits (475), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 83/125 (66%), Positives = 102/125 (81%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQI+ ENP LWT +F+Q+ TML EA LE+AYA +TMP+G +GL Sbjct: 230 LRDESIHLNFGIDVINQIRHENPELWTNDFEQEVLTMLREAVELEVAYARDTMPRGMLGL 289 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CE+YM FI NRRC Q+GL+ L+ NPFPWMSEV+DL+KEKNFFETRVT+Y+ G Sbjct: 290 NADMCEEYMHFITNRRCAQLGLKELYPGATNPFPWMSEVMDLQKEKNFFETRVTDYRTGG 349 Query: 121 ELKWD 125 L+WD Sbjct: 350 ALQWD 354 >gi|289208615|ref|YP_003460681.1| ribonucleoside-diphosphate reductase [Thioalkalivibrio sp. K90mix] gi|288944246|gb|ADC71945.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp. K90mix] Length = 412 Score = 187 bits (475), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 82/125 (65%), Positives = 102/125 (81%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIK+ENPHLWT+EF+ + RT++ +A LE YA +TMP+G +G+ Sbjct: 288 LRDESMHMNFGIDVINQIKVENPHLWTEEFKNEMRTLISDAVELEAQYARDTMPRGVLGM 347 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+ FIANRRC QIGL ++ +NPFPWMSEV+DLKKEKNFFETRVTEYQ G Sbjct: 348 NAQMFEEYLHFIANRRCAQIGLAEMYPGADNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 407 Query: 121 ELKWD 125 L WD Sbjct: 408 ALSWD 412 >gi|288941383|ref|YP_003443623.1| Ribonucleoside-diphosphate reductase [Allochromatium vinosum DSM 180] gi|288896755|gb|ADC62591.1| Ribonucleoside-diphosphate reductase [Allochromatium vinosum DSM 180] Length = 458 Score = 187 bits (474), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 86/125 (68%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIKIENPHLWT EF+Q+ M+ EA LE YAH+TMP+G +GL Sbjct: 334 LRDESMHMNFGIDVINQIKIENPHLWTPEFRQELVGMIREAVELEARYAHDTMPRGVLGL 393 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y+ FIANRRC QIGL + NPFPWMSEV+DLKKEKNFFETRVTEYQ G Sbjct: 394 NAQMFEDYLHFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 453 Query: 121 ELKWD 125 L WD Sbjct: 454 ALNWD 458 >gi|192360823|ref|YP_001982048.1| ribonucleotide-diphosphate reductase subunit beta [Cellvibrio japonicus Ueda107] gi|190686988|gb|ACE84666.1| ribonucleoside reductase, beta subunit [Cellvibrio japonicus Ueda107] Length = 429 Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 82/125 (65%), Positives = 100/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+ENPHLWT EFQQ+ M+ E T LEI YA ++MP+G +G+ Sbjct: 305 LRDESMHLNFGIDVINQIKLENPHLWTAEFQQEVLQMILEGTELEIQYARDSMPRGVLGM 364 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+ FIANRRC Q+GL+ F +NPFPWMSE++DL+KEKNFFETRV EYQ G Sbjct: 365 NAAMMEEYLHFIANRRCAQLGLKEQFPGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 424 Query: 121 ELKWD 125 L WD Sbjct: 425 ALSWD 429 >gi|33593916|ref|NP_881560.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella pertussis Tohama I] gi|33598411|ref|NP_886054.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella parapertussis 12822] gi|33603351|ref|NP_890911.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella bronchiseptica RB50] gi|33563990|emb|CAE43255.1| ribonucleoside-diphosphate reductase beta chain [Bordetella pertussis Tohama I] gi|33574540|emb|CAE39187.1| ribonucleoside-diphosphate reductase beta chain [Bordetella parapertussis] gi|33577475|emb|CAE34740.1| ribonucleoside-diphosphate reductase beta chain [Bordetella bronchiseptica RB50] gi|332383335|gb|AEE68182.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella pertussis CS] Length = 398 Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 81/125 (64%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN IK+ENPHLWT EF+++ R + +A LE AYA +TMP+G +GL Sbjct: 274 LRDESMHCNFGIDLINTIKLENPHLWTPEFREEIRELFRKAVELEYAYAEDTMPRGVLGL 333 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FIANRRC QIG+EPLF ENPFPWM+E+IDLKKE+NFFETRV EYQ G Sbjct: 334 NAPMFKSYLRFIANRRCQQIGIEPLFPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 393 Query: 121 ELKWD 125 L W+ Sbjct: 394 TLSWE 398 >gi|53804295|ref|YP_114081.1| ribonucleotide-diphosphate reductase subunit beta [Methylococcus capsulatus str. Bath] gi|53758056|gb|AAU92347.1| ribonucleoside-diphosphate reductase, beta subunit [Methylococcus capsulatus str. Bath] Length = 403 Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 83/125 (66%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDES+H+NFGIDVINQIK+ENPHLWT F+ + M+ EA +E YA++TMP+G +GL Sbjct: 279 MRDESMHMNFGIDVINQIKVENPHLWTDGFKVEMVQMIREAVDIETQYAYDTMPRGILGL 338 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP ++Y+QFIANRRC QIGL + NPFPWMSEV+DLKKEKNFFETRVTEYQ G Sbjct: 339 NAPMFKEYLQFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 398 Query: 121 ELKWD 125 L WD Sbjct: 399 TLSWD 403 >gi|284032753|ref|YP_003382684.1| Ribonucleoside-diphosphate reductase [Kribbella flavida DSM 17836] gi|283812046|gb|ADB33885.1| Ribonucleoside-diphosphate reductase [Kribbella flavida DSM 17836] Length = 354 Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 85/125 (68%), Positives = 94/125 (75%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLHLNFGID INQIK+ENPHLWT FQ + R ML EA LE+AY T+P G +GL Sbjct: 230 LRDESLHLNFGIDCINQIKLENPHLWTPAFQAEVRRMLTEACELEVAYGRATLPNGMLGL 289 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A CEQYM FI +RR Q+GL PLF T NPF WMSEV+DLKKEKNFFETRV EYQ G Sbjct: 290 TAELCEQYMHFITDRRAEQLGLAPLFGETRNPFGWMSEVMDLKKEKNFFETRVIEYQSGG 349 Query: 121 ELKWD 125 L WD Sbjct: 350 GLSWD 354 >gi|254516739|ref|ZP_05128798.1| ribonucleoside-diphosphate reductase, beta subunit [gamma proteobacterium NOR5-3] gi|219675162|gb|EED31529.1| ribonucleoside-diphosphate reductase, beta subunit [gamma proteobacterium NOR5-3] Length = 441 Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 83/125 (66%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+ENPHLWT+EF+Q++ M+ E T LEI YA +TMP+G +G+ Sbjct: 317 LRDESMHLNFGIDVINQIKLENPHLWTEEFKQEAIQMILEGTQLEIEYARDTMPRGVLGM 376 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+QFIANRR QIGL F +NPFPWMSE++DL+KEKNFFETRV EYQ G Sbjct: 377 NAAMMEEYLQFIANRRLSQIGLPEQFPGVQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 436 Query: 121 ELKWD 125 L WD Sbjct: 437 ALSWD 441 >gi|30250346|ref|NP_842416.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosomonas europaea ATCC 19718] gi|30181141|emb|CAD86334.1| Ribonucleotide reductase [Nitrosomonas europaea ATCC 19718] Length = 382 Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 82/125 (65%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGIDVINQIK+ENPHLWT+EF+++ ++ +A LE YA +TMP+G +GL Sbjct: 258 LRDESMHCNFGIDVINQIKLENPHLWTREFREEISALMRKAVELEYRYAEDTMPRGVLGL 317 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP ++Y++FI NRR HQIGL+PLF NPFPWMSE+IDLKKEKNFFETRV EYQ G Sbjct: 318 NAPMFKEYLRFIINRRSHQIGLDPLFPEAGNPFPWMSEMIDLKKEKNFFETRVIEYQTGG 377 Query: 121 ELKWD 125 L WD Sbjct: 378 VLSWD 382 >gi|300703002|ref|YP_003744604.1| ribonucleoside diphosphate reductase 1 subunit beta, ferritin-like [Ralstonia solanacearum CFBP2957] gi|299070665|emb|CBJ41960.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Ralstonia solanacearum CFBP2957] Length = 402 Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 83/125 (66%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FI NRRC QIGLEPLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 338 NAPMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397 Query: 121 ELKWD 125 L WD Sbjct: 398 ALSWD 402 >gi|82703584|ref|YP_413150.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosospira multiformis ATCC 25196] gi|82411649|gb|ABB75758.1| Ribonucleoside-diphosphate reductase [Nitrosospira multiformis ATCC 25196] Length = 408 Score = 184 bits (467), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 81/125 (64%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGIDV+NQIK+ENPHLWTKEF+ + ++ +A LE YA +TMP+G +GL Sbjct: 284 LRDESMHCNFGIDVVNQIKMENPHLWTKEFRSEISALMQKAVELEYRYAEDTMPRGVLGL 343 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP ++Y+++IANRRC QIGL+ L+ NPFPWMSE+IDLKKEKNFFETRVTEYQ G Sbjct: 344 NAPMFKEYLRYIANRRCQQIGLDILYPGASNPFPWMSEMIDLKKEKNFFETRVTEYQTGG 403 Query: 121 ELKWD 125 L WD Sbjct: 404 VLNWD 408 >gi|83746810|ref|ZP_00943858.1| Ribonucleoside-diphosphate reductase beta chain [Ralstonia solanacearum UW551] gi|207721465|ref|YP_002251905.1| transmembrane ribonucleoside reductase (small chain) protein [Ralstonia solanacearum MolK2] gi|83726579|gb|EAP73709.1| Ribonucleoside-diphosphate reductase beta chain [Ralstonia solanacearum UW551] gi|206586625|emb|CAQ17211.1| transmembrane ribonucleoside reductase (small chain) protein [Ralstonia solanacearum MolK2] Length = 402 Score = 184 bits (467), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 83/125 (66%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FI NRRC QIGLEPLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 338 NAPMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397 Query: 121 ELKWD 125 L WD Sbjct: 398 ALSWD 402 >gi|330983931|gb|EGH82034.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. lachrymans str. M301315] Length = 388 Score = 184 bits (467), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 81/125 (64%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLWT E ++++ M+ + T LEIAYA +TMP+G +G+ Sbjct: 264 LRDESMHLNFGIDMINQIKIENPHLWTDELKREATVMIIQGTQLEIAYARDTMPRGVLGM 323 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+QFIANRR QIGL ++ +NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 324 NAAMMEEYLQFIANRRLTQIGLPEVYAGAKNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 383 Query: 121 ELKWD 125 L WD Sbjct: 384 ALSWD 388 >gi|207744360|ref|YP_002260752.1| transmembrane ribonucleoside reductase (small chain) protein [Ralstonia solanacearum IPO1609] gi|206595765|emb|CAQ62692.1| transmembrane ribonucleoside reductase (small chain) protein [Ralstonia solanacearum IPO1609] Length = 410 Score = 184 bits (467), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 83/125 (66%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL Sbjct: 286 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 345 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FI NRRC QIGLEPLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 346 NAPMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 405 Query: 121 ELKWD 125 L WD Sbjct: 406 ALSWD 410 >gi|163854887|ref|YP_001629185.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella petrii DSM 12804] gi|163258615|emb|CAP40914.1| ribonucleoside-diphosphate reductase beta chain [Bordetella petrii] Length = 396 Score = 184 bits (466), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN IK+ENPHLWT EF+++ R + +A LE AYA +TMP+G +GL Sbjct: 272 LRDESMHCNFGIDLINTIKLENPHLWTPEFREEIRGLFQKAVELEYAYAEDTMPRGVLGL 331 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FIANRRC QIG+EPL+ ENPFPWM+E+IDLKKE+NFFETRV EYQ G Sbjct: 332 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 391 Query: 121 ELKWD 125 L W+ Sbjct: 392 TLSWE 396 >gi|114332419|ref|YP_748641.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosomonas eutropha C91] gi|114309433|gb|ABI60676.1| Ribonucleoside-diphosphate reductase [Nitrosomonas eutropha C91] Length = 377 Score = 184 bits (466), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 81/125 (64%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGIDVINQIK+ENPHLWT+EF+++ ++ +A LE YA +TMP+G +GL Sbjct: 253 LRDESMHCNFGIDVINQIKLENPHLWTREFREEISALMRKAVELEYRYAEDTMPRGVLGL 312 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP ++Y++FI NRR HQIGL+PLF NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 313 NAPMFKEYLRFIINRRSHQIGLDPLFPEAGNPFPWMSEMVDLKKEKNFFETRVIEYQTGG 372 Query: 121 ELKWD 125 L WD Sbjct: 373 VLSWD 377 >gi|187479453|ref|YP_787478.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella avium 197N] gi|115424040|emb|CAJ50593.1| ribonucleoside-diphosphate reductase beta chain [Bordetella avium 197N] Length = 394 Score = 184 bits (466), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN IK+ENPHLWT EF+++ R + +A LE AYA +TMP+G +GL Sbjct: 270 LRDESMHCNFGIDLINTIKLENPHLWTPEFREEIRELFRKAVELEYAYAEDTMPRGVLGL 329 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FIANRRC QIG+EPL+ ENPFPWM+E+IDLKKE+NFFETRV EYQ G Sbjct: 330 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 389 Query: 121 ELKWD 125 L W+ Sbjct: 390 TLSWE 394 >gi|317402620|gb|EFV83180.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter xylosoxidans C54] Length = 399 Score = 183 bits (464), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN +K+ENPHLWT EF+++ R + +A LE AYA +TMP+G +GL Sbjct: 275 LRDESMHCNFGIDLINTVKLENPHLWTPEFREEIRELFRKAVELEYAYAEDTMPRGVLGL 334 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FIANRRC QIG+EPL+ ENPFPWM+E+IDLKKE+NFFETRV EYQ G Sbjct: 335 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 394 Query: 121 ELKWD 125 L W+ Sbjct: 395 TLSWE 399 >gi|307546480|ref|YP_003898959.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas elongata DSM 2581] gi|307218504|emb|CBV43774.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas elongata DSM 2581] Length = 415 Score = 183 bits (464), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 82/125 (65%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFG+D+INQIKIENPHLWT EFQ + M+ E T LEIAYA ++MP+G +G+ Sbjct: 291 LRDESMHLNFGVDMINQIKIENPHLWTPEFQDECTQMILEGTELEIAYARDSMPRGVLGM 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+ FI NRR QIGL+ F +NPFPWMSE+IDL+KEKNFFETRVTEYQ G Sbjct: 351 NAAIMEEYLHFICNRRLAQIGLKEQFPGAQNPFPWMSEIIDLRKEKNFFETRVTEYQVGG 410 Query: 121 ELKWD 125 L WD Sbjct: 411 ALSWD 415 >gi|311103857|ref|YP_003976710.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter xylosoxidans A8] gi|310758546|gb|ADP13995.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter xylosoxidans A8] Length = 399 Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN +K+ENPHLWT EF+++ R + +A LE AYA +TMP+G +GL Sbjct: 275 LRDESMHCNFGIDLINTVKLENPHLWTPEFREEIRELFRKAVELEYAYAEDTMPRGVLGL 334 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FIANRRC QIG+EPL+ ENPFPWM+E+IDLKKE+NFFETRV EYQ G Sbjct: 335 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 394 Query: 121 ELKWD 125 L W+ Sbjct: 395 TLSWE 399 >gi|332286774|ref|YP_004418685.1| ribonucleoside-diphosphate reductase beta chain [Pusillimonas sp. T7-7] gi|330430727|gb|AEC22061.1| ribonucleoside-diphosphate reductase beta chain [Pusillimonas sp. T7-7] Length = 387 Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 81/125 (64%), Positives = 100/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN IK+ENPHLWT EF+++ R + +A LE AYA +TMP+G +GL Sbjct: 263 LRDESMHCNFGIDLINTIKLENPHLWTAEFREELRELFKKAVDLEYAYAEDTMPRGVLGL 322 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FIANRRC QIGLEPLF ENPFPWM+E+IDLKKE+NFFETRV EYQ G Sbjct: 323 NASMFKSYLRFIANRRCQQIGLEPLFGQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 382 Query: 121 ELKWD 125 L W+ Sbjct: 383 ALSWE 387 >gi|260220050|emb|CBA27200.1| Ribonucleoside-diphosphate reductase subunit alpha [Curvibacter putative symbiont of Hydra magnipapillata] Length = 1306 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 78/125 (62%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENPHLWT EF+ + + + +A LE YA +TMP+G +G+ Sbjct: 1182 LRDESMHCNFGIDLINQLKLENPHLWTPEFKAEIKALFEKAVELEYRYAEDTMPRGVLGM 1241 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLEPLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 1242 NASMFKGYLRYIANRRATQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 1301 Query: 121 ELKWD 125 L WD Sbjct: 1302 ALSWD 1306 >gi|92112799|ref|YP_572727.1| ribonucleotide-diphosphate reductase subunit beta [Chromohalobacter salexigens DSM 3043] gi|91795889|gb|ABE58028.1| Ribonucleoside-diphosphate reductase [Chromohalobacter salexigens DSM 3043] Length = 420 Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 82/125 (65%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFG+D+INQIKIENPHLWT EFQ + M+ E T LEIAYA ++MP+G +G+ Sbjct: 296 LRDESMHLNFGVDMINQIKIENPHLWTPEFQDEVTQMIIEGTELEIAYARDSMPRGVLGM 355 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+ FI NRR QIGL+ + ENPFPWMSE+IDL+KEKNFFETRVTEYQ G Sbjct: 356 NAAIMEEYLHFICNRRLAQIGLKEQYPGAENPFPWMSEIIDLRKEKNFFETRVTEYQVGG 415 Query: 121 ELKWD 125 L WD Sbjct: 416 ALSWD 420 >gi|226940720|ref|YP_002795794.1| ribonucleotide-diphosphate reductase subunit beta [Laribacter hongkongensis HLHK9] gi|226715647|gb|ACO74785.1| Ribonucleoside-diphosphate reductase beta chain [Laribacter hongkongensis HLHK9] Length = 357 Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 83/125 (66%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN IK ENPHLWT EFQ++ + +A LE AYA +TMP+G +GL Sbjct: 233 LRDESMHCNFGIDLINSIKQENPHLWTVEFQEELYGLFRKAIDLEYAYAEDTMPRGVLGL 292 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA ++Y+ FIANRR QIGLEPLF + +NPFPWMSE+IDLKKEKNFFETRVTEYQ G Sbjct: 293 NAAMFKEYLDFIANRRMQQIGLEPLFTHVDNPFPWMSEMIDLKKEKNFFETRVTEYQSGG 352 Query: 121 ELKWD 125 L WD Sbjct: 353 ALDWD 357 >gi|90022104|ref|YP_527931.1| ribonucleotide-diphosphate reductase subunit beta [Saccharophagus degradans 2-40] gi|89951704|gb|ABD81719.1| Class Ia ribonucleoside-diphosphate reductase beta subunit [Saccharophagus degradans 2-40] Length = 423 Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+ENPHLWT+EFQ +++ M+ E T LEIAYA +TMP+G +G+ Sbjct: 299 LRDESMHLNFGIDVINQIKLENPHLWTEEFQAETKQMILEGTELEIAYARDTMPRGVLGM 358 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+ FIANRR Q+GL + +NPFPWMSE++DL+KEKNFFETRV EYQ G Sbjct: 359 NAAMMEEYLHFIANRRMAQLGLAEAYPGAKNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 418 Query: 121 ELKWD 125 L W+ Sbjct: 419 ALSWE 423 >gi|88705571|ref|ZP_01103281.1| ribonucleoside-diphosphate reductase, beta subunit [Congregibacter litoralis KT71] gi|88700084|gb|EAQ97193.1| ribonucleoside-diphosphate reductase, beta subunit [Congregibacter litoralis KT71] Length = 469 Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 82/125 (65%), Positives = 100/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+ENP LWT+EF+Q++ M+ E T LEI YA +TMP+G +G+ Sbjct: 345 LRDESMHLNFGIDVINQIKLENPQLWTEEFKQEAIQMILEGTQLEIEYARDTMPRGVLGM 404 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+QFIANRR QIGL F +NPFPWMSE++DL+KEKNFFETRV EYQ G Sbjct: 405 NAAMMEEYLQFIANRRLSQIGLPEQFPGVQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 464 Query: 121 ELKWD 125 L WD Sbjct: 465 ALSWD 469 >gi|302877617|ref|YP_003846181.1| Ribonucleoside-diphosphate reductase [Gallionella capsiferriformans ES-2] gi|302580406|gb|ADL54417.1| Ribonucleoside-diphosphate reductase [Gallionella capsiferriformans ES-2] Length = 365 Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 78/125 (62%), Positives = 102/125 (81%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFG+D+INQIK+ENPHLWT F+++ R ++ + LE AYA +TMP+G +GL Sbjct: 241 LRDESMHLNFGVDLINQIKMENPHLWTAAFREEIRGLMQKGVELEYAYAEDTMPRGILGL 300 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA ++Y++FIANRRC QIG++ L++ NPFPWMSE+IDLKKEKNFFE+RVTEYQ G Sbjct: 301 NATMFKEYLRFIANRRCQQIGVDILYQGATNPFPWMSEMIDLKKEKNFFESRVTEYQTGG 360 Query: 121 ELKWD 125 L WD Sbjct: 361 TLSWD 365 >gi|325519933|gb|EGC99191.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia sp. TJI49] Length = 403 Score = 181 bits (459), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398 Query: 121 ELKWD 125 L W+ Sbjct: 399 ALSWE 403 >gi|254282900|ref|ZP_04957868.1| ribonucleoside-diphosphate reductase, beta subunit [gamma proteobacterium NOR51-B] gi|219679103|gb|EED35452.1| ribonucleoside-diphosphate reductase, beta subunit [gamma proteobacterium NOR51-B] Length = 421 Score = 181 bits (459), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+ENPHLWT EFQ++ M+ E T LEI YA +TMP+G +G+ Sbjct: 297 LRDESMHLNFGIDVINQIKLENPHLWTAEFQEEVVQMILEGTQLEIEYARDTMPRGVLGM 356 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+QFI NRR +Q+GL + +NPFPWMSE++DL+KEKNFFETRV EYQ G Sbjct: 357 NAAMMEEYLQFICNRRLNQLGLSEQYPGVQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 416 Query: 121 ELKWD 125 L WD Sbjct: 417 ALTWD 421 >gi|206561765|ref|YP_002232530.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia cenocepacia J2315] gi|254246390|ref|ZP_04939711.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia cenocepacia PC184] gi|124871166|gb|EAY62882.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia cenocepacia PC184] gi|198037807|emb|CAR53751.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia cenocepacia J2315] Length = 403 Score = 181 bits (459), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398 Query: 121 ELKWD 125 L W+ Sbjct: 399 ALSWE 403 >gi|119504228|ref|ZP_01626308.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma proteobacterium HTCC2080] gi|119459736|gb|EAW40831.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma proteobacterium HTCC2080] Length = 419 Score = 181 bits (459), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 82/125 (65%), Positives = 100/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+ENP LWT EFQQ++ M+ E T LEIAYA +TMP+G +G+ Sbjct: 295 LRDESMHLNFGIDVINQIKLENPLLWTPEFQQEAIQMILEGTELEIAYARDTMPRGVLGM 354 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+QFI NRR +Q+GL F +NPFPWMSE++DL+KEKNFFETRV EYQ G Sbjct: 355 NAAMMEEYLQFICNRRLNQVGLPEQFPGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 414 Query: 121 ELKWD 125 L WD Sbjct: 415 ALTWD 419 >gi|256822964|ref|YP_003146927.1| Ribonucleoside-diphosphate reductase [Kangiella koreensis DSM 16069] gi|256796503|gb|ACV27159.1| Ribonucleoside-diphosphate reductase [Kangiella koreensis DSM 16069] Length = 421 Score = 181 bits (459), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 81/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFG+D+INQIK+ENPHLWT EF+Q+ M+ E T LEI YA +TMP+G +G+ Sbjct: 297 LRDESMHLNFGVDIINQIKLENPHLWTAEFKQEVLQMILEGTQLEIEYARDTMPRGVLGM 356 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+QFI NRR Q+GL FK NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 357 NAGMMEEYLQFICNRRLAQLGLPEQFKNVSNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 416 Query: 121 ELKWD 125 L WD Sbjct: 417 ALSWD 421 >gi|293603286|ref|ZP_06685715.1| ribonucleotide-diphosphate reductase subunit beta subunit [Achromobacter piechaudii ATCC 43553] gi|292818321|gb|EFF77373.1| ribonucleotide-diphosphate reductase subunit beta subunit [Achromobacter piechaudii ATCC 43553] Length = 398 Score = 181 bits (458), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 78/125 (62%), Positives = 100/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN +K+ENPHLWT F+++ R + +A LE AYA +TMP+G +GL Sbjct: 274 LRDESMHCNFGIDLINTVKLENPHLWTPAFREEIRELFRKAVELEYAYAEDTMPRGVLGL 333 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FIANRRC QIG+EPL+ ENPFPWM+E+IDLKKE+NFFETRV EYQ G Sbjct: 334 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 393 Query: 121 ELKWD 125 L W+ Sbjct: 394 TLSWE 398 >gi|291615085|ref|YP_003525242.1| ribonucleoside-diphosphate reductase [Sideroxydans lithotrophicus ES-1] gi|291585197|gb|ADE12855.1| Ribonucleoside-diphosphate reductase [Sideroxydans lithotrophicus ES-1] Length = 382 Score = 181 bits (458), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 78/125 (62%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFG+DVINQIK+ENPHLWT F+++ R ++ + LE YA +TMP+G +GL Sbjct: 258 LRDESMHLNFGVDVINQIKLENPHLWTPAFREEVRGLIQKGVELEYRYAEDTMPRGVLGL 317 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA ++Y++FIANRRC QIG++ L++ NPFPWM+E+IDLKKEKNFFETRVTEYQ G Sbjct: 318 NAGMFKEYLRFIANRRCQQIGVDMLYQGATNPFPWMAEMIDLKKEKNFFETRVTEYQTGG 377 Query: 121 ELKWD 125 L WD Sbjct: 378 ALSWD 382 >gi|161525957|ref|YP_001580969.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia multivorans ATCC 17616] gi|160343386|gb|ABX16472.1| Ribonucleoside-diphosphate reductase [Burkholderia multivorans ATCC 17616] Length = 396 Score = 181 bits (458), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 272 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 331 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 332 NASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 391 Query: 121 ELKWD 125 L W+ Sbjct: 392 ALSWE 396 >gi|76808925|ref|YP_334881.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia pseudomallei 1710b] gi|254208116|ref|ZP_04914466.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei JHU] gi|76578378|gb|ABA47853.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia pseudomallei 1710b] gi|147752010|gb|EDK59077.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei JHU] Length = 376 Score = 181 bits (458), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL Sbjct: 252 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 311 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 312 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 371 Query: 121 ELKWD 125 L W+ Sbjct: 372 ALSWE 376 >gi|189349324|ref|YP_001944952.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia multivorans ATCC 17616] gi|221213238|ref|ZP_03586213.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia multivorans CGD1] gi|189333346|dbj|BAG42416.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia multivorans ATCC 17616] gi|221166690|gb|EED99161.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia multivorans CGD1] Length = 403 Score = 181 bits (458), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 339 NASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398 Query: 121 ELKWD 125 L W+ Sbjct: 399 ALSWE 403 >gi|121598515|ref|YP_991780.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia mallei SAVP1] gi|124385654|ref|YP_001027273.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia mallei NCTC 10229] gi|126439848|ref|YP_001060484.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia pseudomallei 668] gi|126451145|ref|YP_001082790.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia mallei NCTC 10247] gi|126453692|ref|YP_001067748.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia pseudomallei 1106a] gi|134280207|ref|ZP_01766918.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei 305] gi|166998593|ref|ZP_02264451.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei PRL-20] gi|167721297|ref|ZP_02404533.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia pseudomallei DM98] gi|167740266|ref|ZP_02413040.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia pseudomallei 14] gi|167817486|ref|ZP_02449166.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia pseudomallei 91] gi|167847373|ref|ZP_02472881.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia pseudomallei B7210] gi|167895962|ref|ZP_02483364.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia pseudomallei 7894] gi|167904346|ref|ZP_02491551.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia pseudomallei NCTC 13177] gi|167912606|ref|ZP_02499697.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia pseudomallei 112] gi|217420440|ref|ZP_03451945.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei 576] gi|226196790|ref|ZP_03792369.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei Pakistan 9] gi|237813879|ref|YP_002898330.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei MSHR346] gi|238561262|ref|ZP_00442338.2| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei GB8 horse 4] gi|242316188|ref|ZP_04815204.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei 1106b] gi|254178822|ref|ZP_04885476.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei ATCC 10399] gi|254199038|ref|ZP_04905453.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei S13] gi|254202774|ref|ZP_04909137.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei FMH] gi|254259655|ref|ZP_04950709.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei 1710a] gi|254299327|ref|ZP_04966777.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei 406e] gi|121227325|gb|ABM49843.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei SAVP1] gi|124293674|gb|ABN02943.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei NCTC 10229] gi|126219341|gb|ABN82847.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei 668] gi|126227334|gb|ABN90874.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei 1106a] gi|126244015|gb|ABO07108.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei NCTC 10247] gi|134248214|gb|EBA48297.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei 305] gi|147747021|gb|EDK54098.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei FMH] gi|157808756|gb|EDO85926.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei 406e] gi|160694736|gb|EDP84744.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei ATCC 10399] gi|169656868|gb|EDS88265.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei S13] gi|217395852|gb|EEC35869.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei 576] gi|225931050|gb|EEH27058.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei Pakistan 9] gi|237506031|gb|ACQ98349.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei MSHR346] gi|238524965|gb|EEP88395.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei GB8 horse 4] gi|242139427|gb|EES25829.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei 1106b] gi|243065276|gb|EES47462.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei PRL-20] gi|254218344|gb|EET07728.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei 1710a] Length = 403 Score = 180 bits (457), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 338 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398 Query: 121 ELKWD 125 L W+ Sbjct: 399 ALSWE 403 >gi|83719302|ref|YP_441701.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia thailandensis E264] gi|83653127|gb|ABC37190.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia thailandensis E264] Length = 377 Score = 180 bits (457), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL Sbjct: 253 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 312 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 313 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 372 Query: 121 ELKWD 125 L W+ Sbjct: 373 ALSWE 377 >gi|167825888|ref|ZP_02457359.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia pseudomallei 9] gi|167924622|ref|ZP_02511713.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia pseudomallei BCC215] gi|254180586|ref|ZP_04887184.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei 1655] gi|254190977|ref|ZP_04897483.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei Pasteur 52237] gi|157938651|gb|EDO94321.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei Pasteur 52237] gi|184211125|gb|EDU08168.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei 1655] Length = 372 Score = 180 bits (457), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL Sbjct: 248 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 307 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 308 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 367 Query: 121 ELKWD 125 L W+ Sbjct: 368 ALSWE 372 >gi|167574685|ref|ZP_02367559.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia oklahomensis C6786] Length = 369 Score = 180 bits (457), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL Sbjct: 245 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 304 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 305 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 364 Query: 121 ELKWD 125 L W+ Sbjct: 365 ALSWE 369 >gi|254784923|ref|YP_003072351.1| ribonucleotide-diphosphate reductase subunit beta [Teredinibacter turnerae T7901] gi|237687536|gb|ACR14800.1| ribonucleoside-diphosphate reductase [Teredinibacter turnerae T7901] Length = 453 Score = 180 bits (457), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 79/124 (63%), Positives = 99/124 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+ENPHLWT+ FQQ+ + M+ E T LEI YA +TMP+G +G+ Sbjct: 330 LRDESMHLNFGIDVINQIKLENPHLWTESFQQEVKQMVLEGTELEIGYARDTMPRGVLGM 389 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+ FIANRR Q+GL+ + +NPFPWMSE++DL+KEKNFFETRV EYQ G Sbjct: 390 NAAIMEEYLHFIANRRLAQLGLKEAYPGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 449 Query: 121 ELKW 124 L W Sbjct: 450 ALSW 453 >gi|167564160|ref|ZP_02357076.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia oklahomensis EO147] Length = 369 Score = 180 bits (457), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL Sbjct: 245 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 304 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 305 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 364 Query: 121 ELKWD 125 L W+ Sbjct: 365 ALSWE 369 >gi|295677726|ref|YP_003606250.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1002] gi|295437569|gb|ADG16739.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1002] Length = 411 Score = 180 bits (457), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 287 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRAIFQQAVELEYRYAEDTMPRGVLGL 346 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 347 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 406 Query: 121 ELKWD 125 L W+ Sbjct: 407 ALSWE 411 >gi|209521089|ref|ZP_03269819.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. H160] gi|209498472|gb|EDZ98597.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. H160] Length = 411 Score = 180 bits (456), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 287 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRAIFQQAVELEYRYAEDTMPRGVLGL 346 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 347 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 406 Query: 121 ELKWD 125 L W+ Sbjct: 407 ALSWE 411 >gi|115350552|ref|YP_772391.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia ambifaria AMMD] gi|172059584|ref|YP_001807236.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia ambifaria MC40-6] gi|115280540|gb|ABI86057.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria AMMD] gi|171992101|gb|ACB63020.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria MC40-6] Length = 403 Score = 180 bits (456), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398 Query: 121 ELKWD 125 L W+ Sbjct: 399 ALSWE 403 >gi|170699976|ref|ZP_02891003.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria IOP40-10] gi|170135124|gb|EDT03425.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria IOP40-10] Length = 403 Score = 180 bits (456), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398 Query: 121 ELKWD 125 L W+ Sbjct: 399 ALSWE 403 >gi|73542624|ref|YP_297144.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia eutropha JMP134] gi|72120037|gb|AAZ62300.1| Ribonucleoside-diphosphate reductase [Ralstonia eutropha JMP134] Length = 394 Score = 180 bits (456), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 81/125 (64%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL Sbjct: 270 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 329 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FI NRRC QIGL+ LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 330 NAPMFKSYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 389 Query: 121 ELKWD 125 L WD Sbjct: 390 ALSWD 394 >gi|325983070|ref|YP_004295472.1| ribonucleoside-diphosphate reductase [Nitrosomonas sp. AL212] gi|325532589|gb|ADZ27310.1| Ribonucleoside-diphosphate reductase [Nitrosomonas sp. AL212] Length = 381 Score = 180 bits (456), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 78/125 (62%), Positives = 100/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGIDVINQIK+ENP LWTK F+++ ++ +A LE YA +TMP+G +G+ Sbjct: 257 LRDESMHCNFGIDVINQIKMENPQLWTKAFREEIAALMQKAVALEYRYAEDTMPRGVLGM 316 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP ++Y+++IANRRC QIGL+ L+ NPFPWMSE++DLKKEKNFFETRVTEYQ G Sbjct: 317 NAPMFKEYLRYIANRRCQQIGLDTLYPNANNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 376 Query: 121 ELKWD 125 L WD Sbjct: 377 ALSWD 381 >gi|194290770|ref|YP_002006677.1| ribonucleotide-diphosphate reductase subunit beta [Cupriavidus taiwanensis LMG 19424] gi|193224605|emb|CAQ70616.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Cupriavidus taiwanensis LMG 19424] Length = 396 Score = 180 bits (456), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 81/125 (64%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL Sbjct: 272 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 331 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FI NRRC QIGL+ LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 332 NAPMFKSYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 391 Query: 121 ELKWD 125 L WD Sbjct: 392 ALSWD 396 >gi|113869188|ref|YP_727677.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia eutropha H16] gi|113527964|emb|CAJ94309.1| Ribonucleoside-diphosphate reductase beta subunit [Ralstonia eutropha H16] Length = 395 Score = 180 bits (456), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 81/125 (64%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL Sbjct: 271 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 330 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FI NRRC QIGL+ LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 331 NAPMFKSYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 390 Query: 121 ELKWD 125 L WD Sbjct: 391 ALSWD 395 >gi|221202418|ref|ZP_03575450.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia multivorans CGD2M] gi|221208122|ref|ZP_03581127.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia multivorans CGD2] gi|221172025|gb|EEE04467.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia multivorans CGD2] gi|221177695|gb|EEE10110.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia multivorans CGD2M] Length = 372 Score = 180 bits (456), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 248 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 307 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 308 NASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 367 Query: 121 ELKWD 125 L W+ Sbjct: 368 ALSWE 372 >gi|171318520|ref|ZP_02907672.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria MEX-5] gi|171096306|gb|EDT41212.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria MEX-5] Length = 403 Score = 180 bits (456), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398 Query: 121 ELKWD 125 L W+ Sbjct: 399 ALSWE 403 >gi|53720599|ref|YP_109585.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia pseudomallei K96243] gi|53726102|ref|YP_104055.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia mallei ATCC 23344] gi|52211013|emb|CAH37001.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia pseudomallei K96243] gi|52429525|gb|AAU50118.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei ATCC 23344] Length = 350 Score = 180 bits (456), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL Sbjct: 226 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 285 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 286 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 345 Query: 121 ELKWD 125 L W+ Sbjct: 346 ALSWE 350 >gi|238026167|ref|YP_002910398.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia glumae BGR1] gi|237875361|gb|ACR27694.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia glumae BGR1] Length = 407 Score = 180 bits (456), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL Sbjct: 283 LRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIRELFKRAVELEYRYAEDTMPRGVLGL 342 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FIANRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 343 NAAMFKSYLRFIANRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 402 Query: 121 ELKWD 125 L W+ Sbjct: 403 ALSWE 407 >gi|167580513|ref|ZP_02373387.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia thailandensis TXDOH] gi|167618621|ref|ZP_02387252.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia thailandensis Bt4] gi|257137870|ref|ZP_05586132.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia thailandensis E264] Length = 350 Score = 180 bits (456), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL Sbjct: 226 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 285 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 286 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 345 Query: 121 ELKWD 125 L W+ Sbjct: 346 ALSWE 350 >gi|254253304|ref|ZP_04946622.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia dolosa AUO158] gi|124895913|gb|EAY69793.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia dolosa AUO158] Length = 403 Score = 180 bits (456), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 339 NASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398 Query: 121 ELKWD 125 L W+ Sbjct: 399 ALSWE 403 >gi|107021673|ref|YP_620000.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia cenocepacia AU 1054] gi|116688619|ref|YP_834242.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia cenocepacia HI2424] gi|105891862|gb|ABF75027.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia AU 1054] gi|116646708|gb|ABK07349.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia HI2424] Length = 382 Score = 180 bits (456), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 258 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 317 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 318 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 377 Query: 121 ELKWD 125 L W+ Sbjct: 378 ALSWE 382 >gi|78065156|ref|YP_367925.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia sp. 383] gi|77965901|gb|ABB07281.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. 383] Length = 403 Score = 180 bits (456), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398 Query: 121 ELKWD 125 L W+ Sbjct: 399 ALSWE 403 >gi|170731918|ref|YP_001763865.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia cenocepacia MC0-3] gi|169815160|gb|ACA89743.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia MC0-3] Length = 403 Score = 180 bits (456), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398 Query: 121 ELKWD 125 L W+ Sbjct: 399 ALSWE 403 >gi|167837963|ref|ZP_02464822.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia thailandensis MSMB43] Length = 303 Score = 179 bits (455), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL Sbjct: 179 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 238 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 239 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 298 Query: 121 ELKWD 125 L W+ Sbjct: 299 ALSWE 303 >gi|329893650|ref|ZP_08269784.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma proteobacterium IMCC3088] gi|328923577|gb|EGG30889.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma proteobacterium IMCC3088] Length = 432 Score = 179 bits (455), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+ENPHLWT++FQ++ ML E T +EI YA +TMP+G +G+ Sbjct: 308 LRDESMHLNFGIDVINQIKLENPHLWTEDFQKEVIQMLLEGTQIEIEYARDTMPRGVLGM 367 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+QFI NRR Q+GL F +NPFPWMSE++DL+KEKNFFETRV EYQ G Sbjct: 368 NAAMMEEYLQFICNRRLAQLGLPEQFPGVQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 427 Query: 121 ELKWD 125 L WD Sbjct: 428 ALSWD 432 >gi|94312018|ref|YP_585228.1| ribonucleotide-diphosphate reductase subunit beta [Cupriavidus metallidurans CH34] gi|93355870|gb|ABF09959.1| Ribonucleoside-diphosphate reductase beta subunit [Cupriavidus metallidurans CH34] Length = 395 Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 81/125 (64%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL Sbjct: 271 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 330 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FI NRRC QIGL+ LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 331 NAPMFKGYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 390 Query: 121 ELKWD 125 L WD Sbjct: 391 ALSWD 395 >gi|297538242|ref|YP_003674011.1| Ribonucleoside-diphosphate reductase [Methylotenera sp. 301] gi|297257589|gb|ADI29434.1| Ribonucleoside-diphosphate reductase [Methylotenera sp. 301] Length = 376 Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGIDVIN IK+ENPHLWT EF+++ +T++ + LE YA TMP+G +GL Sbjct: 252 LRDESMHCNFGIDVINTIKLENPHLWTAEFREEIKTLMQKGVELEYQYAEATMPRGVLGL 311 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA ++Y++FIANRRC QIGL+ L+ NPFPWMSE++DLKKEKNFFETRVTEYQ G Sbjct: 312 NATMFKEYLRFIANRRCTQIGLDVLYPGATNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 371 Query: 121 ELKWD 125 L WD Sbjct: 372 ALSWD 376 >gi|320323423|gb|EFW79511.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. glycinea str. B076] gi|320327620|gb|EFW83632.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. glycinea str. race 4] gi|330876273|gb|EGH10422.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. glycinea str. race 4] Length = 415 Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L WD Sbjct: 411 ALSWD 415 >gi|70731866|ref|YP_261608.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas fluorescens Pf-5] gi|68346165|gb|AAY93771.1| ribonucleoside-diphosphate reductase, beta subunit, putative [Pseudomonas fluorescens Pf-5] Length = 415 Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L WD Sbjct: 411 ALSWD 415 >gi|134294683|ref|YP_001118418.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia vietnamiensis G4] gi|134137840|gb|ABO53583.1| Ribonucleoside-diphosphate reductase [Burkholderia vietnamiensis G4] Length = 403 Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVELEYRYAEDTMPRGVLGL 338 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398 Query: 121 ELKWD 125 L W+ Sbjct: 399 ALSWE 403 >gi|330811278|ref|YP_004355740.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379386|gb|AEA70736.1| Ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 415 Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L WD Sbjct: 411 ALSWD 415 >gi|28868867|ref|NP_791486.1| ribonucleoside-diphosphate reductase subunit beta [Pseudomonas syringae pv. tomato str. DC3000] gi|213969520|ref|ZP_03397656.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas syringae pv. tomato T1] gi|301385974|ref|ZP_07234392.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. tomato Max13] gi|302058701|ref|ZP_07250242.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. tomato K40] gi|302134408|ref|ZP_07260398.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28852106|gb|AAO55181.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas syringae pv. tomato str. DC3000] gi|213925616|gb|EEB59175.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas syringae pv. tomato T1] gi|330960626|gb|EGH60886.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. maculicola str. ES4326] gi|331016758|gb|EGH96814.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 415 Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L WD Sbjct: 411 ALSWD 415 >gi|77460516|ref|YP_350023.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas fluorescens Pf0-1] gi|77384519|gb|ABA76032.1| ribonucleoside-diphosphate reductase beta chain [Pseudomonas fluorescens Pf0-1] Length = 416 Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEASQMILQGTQLEIEYARDTMPRGVLGM 351 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 352 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411 Query: 121 ELKWD 125 L WD Sbjct: 412 ALSWD 416 >gi|66046950|ref|YP_236791.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. syringae B728a] gi|237798938|ref|ZP_04587399.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. oryzae str. 1_6] gi|237806191|ref|ZP_04592895.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. oryzae str. 1_6] gi|63257657|gb|AAY38753.1| Ribonucleoside-diphosphate reductase [Pseudomonas syringae pv. syringae B728a] gi|330980156|gb|EGH78342.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. aptata str. DSM 50252] gi|331021792|gb|EGI01849.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027304|gb|EGI07359.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. oryzae str. 1_6] Length = 415 Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L WD Sbjct: 411 ALSWD 415 >gi|330892405|gb|EGH25066.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. mori str. 301020] Length = 415 Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L WD Sbjct: 411 ALSWD 415 >gi|330880140|gb|EGH14289.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330966559|gb|EGH66819.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. actinidiae str. M302091] Length = 415 Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L WD Sbjct: 411 ALSWD 415 >gi|71737432|ref|YP_275887.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. phaseolicola 1448A] gi|257485935|ref|ZP_05639976.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289628680|ref|ZP_06461634.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648392|ref|ZP_06479735.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. aesculi str. 2250] gi|298487941|ref|ZP_07005980.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|302184861|ref|ZP_07261534.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. syringae 642] gi|71557985|gb|AAZ37196.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157492|gb|EFH98573.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330866023|gb|EGH00732.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330896997|gb|EGH28545.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. japonica str. M301072PT] gi|330986742|gb|EGH84845.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010341|gb|EGH90397.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 415 Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L WD Sbjct: 411 ALSWD 415 >gi|167586060|ref|ZP_02378448.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia ubonensis Bu] Length = 403 Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVDLEYRYAEDTMPRGVLGL 338 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 339 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398 Query: 121 ELKWD 125 L W+ Sbjct: 399 ALSWE 403 >gi|17547523|ref|NP_520925.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia solanacearum GMI1000] gi|17429827|emb|CAD16511.1| putative transmembrane ribonucleoside reductase (small chain) oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 400 Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL Sbjct: 276 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 335 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FI NRRC QIGL+ LF +NPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 336 NAPMFKGYLRFICNRRCQQIGLDALFPNEDNPFPWMSEMIDLKKERNFFETRVIEYQTGG 395 Query: 121 ELKWD 125 L WD Sbjct: 396 ALSWD 400 >gi|312960686|ref|ZP_07775192.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas fluorescens WH6] gi|311285212|gb|EFQ63787.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas fluorescens WH6] Length = 416 Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 352 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411 Query: 121 ELKWD 125 L WD Sbjct: 412 ALSWD 416 >gi|299065648|emb|CBJ36820.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Ralstonia solanacearum CMR15] Length = 398 Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL Sbjct: 274 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 333 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FI NRRC QIGL+ LF +NPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 334 NAPMFKGYLRFICNRRCQQIGLDALFPNEDNPFPWMSEMIDLKKERNFFETRVIEYQTGG 393 Query: 121 ELKWD 125 L WD Sbjct: 394 ALSWD 398 >gi|229590245|ref|YP_002872364.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas fluorescens SBW25] gi|229362111|emb|CAY49013.1| putative ribonucleoside-diphosphate reductase beta chain [Pseudomonas fluorescens SBW25] Length = 416 Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 352 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411 Query: 121 ELKWD 125 L WD Sbjct: 412 ALSWD 416 >gi|152980709|ref|YP_001354668.1| ribonucleotide-diphosphate reductase subunit beta [Janthinobacterium sp. Marseille] gi|151280786|gb|ABR89196.1| ribonucleoside-diphosphate reductase beta chain [Janthinobacterium sp. Marseille] Length = 392 Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 100/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN IK+ENPHLWT +F+++ +T+ A LE YA +TMP+G +GL Sbjct: 268 LRDESMHCNFGIDLINTIKLENPHLWTPQFREEIKTLFLRAVELEYRYAEDTMPRGVLGL 327 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FIANRR QIGLEP+F+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 328 NAPMFKGYLRFIANRRAQQIGLEPMFEQEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 387 Query: 121 ELKWD 125 L W+ Sbjct: 388 ALNWE 392 >gi|312962626|ref|ZP_07777115.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas fluorescens WH6] gi|311283001|gb|EFQ61593.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas fluorescens WH6] Length = 136 Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 12 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 71 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 72 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 131 Query: 121 ELKWD 125 L WD Sbjct: 132 ALSWD 136 >gi|253997287|ref|YP_003049351.1| Ribonucleoside-diphosphate reductase [Methylotenera mobilis JLW8] gi|253983966|gb|ACT48824.1| Ribonucleoside-diphosphate reductase [Methylotenera mobilis JLW8] Length = 377 Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGIDVIN IK+ENPHLWT EF+ + + ++ LE YA TMP+G +GL Sbjct: 253 LRDESMHCNFGIDVINTIKLENPHLWTAEFRDEIKGLIQHGVELEYRYAEATMPRGVLGL 312 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA ++Y++FIANRRC QIGL+ L++ NPFPWMSE+IDLKKEKNFFETRVTEYQ G Sbjct: 313 NATMFKEYLRFIANRRCQQIGLDVLYQGATNPFPWMSEMIDLKKEKNFFETRVTEYQTGG 372 Query: 121 ELKWD 125 L WD Sbjct: 373 ALSWD 377 >gi|229592166|ref|YP_002874285.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas fluorescens SBW25] gi|229364032|emb|CAY51597.1| ribonucleoside-diphosphate reductase beta chain [Pseudomonas fluorescens SBW25] Length = 416 Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 352 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411 Query: 121 ELKWD 125 L WD Sbjct: 412 ALSWD 416 >gi|187930114|ref|YP_001900601.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia pickettii 12J] gi|187727004|gb|ACD28169.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12J] Length = 402 Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FI NRRC QIGL+ LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 338 NAPMFKGYLRFICNRRCQQIGLDALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397 Query: 121 ELKWD 125 L W+ Sbjct: 398 ALSWE 402 >gi|331006663|ref|ZP_08329944.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma proteobacterium IMCC1989] gi|330419531|gb|EGG93916.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma proteobacterium IMCC1989] Length = 444 Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 78/125 (62%), Positives = 100/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIK+ENPHLWT+EF+ + M+ E T LEIAYA +TMP+G +G+ Sbjct: 320 LRDESMHLNFGIDIINQIKLENPHLWTEEFKAEVTQMVLEGTELEIAYARDTMPRGVLGM 379 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+QFI+NRR Q+GL + +NPFPWMSE++DL+KEKNFFETRV EYQ G Sbjct: 380 NAAMMEEYLQFISNRRLAQLGLTEQYPGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 439 Query: 121 ELKWD 125 L W+ Sbjct: 440 ALTWE 444 >gi|300690381|ref|YP_003751376.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Ralstonia solanacearum PSI07] gi|299077441|emb|CBJ50067.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Ralstonia solanacearum PSI07] Length = 402 Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FI NRRC QIGL+ LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 338 NAPMFKGYLRFICNRRCQQIGLDALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397 Query: 121 ELKWD 125 L W+ Sbjct: 398 ALSWE 402 >gi|241664219|ref|YP_002982579.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia pickettii 12D] gi|309783064|ref|ZP_07677783.1| ribonucleoside-diphosphate reductase, beta subunit [Ralstonia sp. 5_7_47FAA] gi|240866246|gb|ACS63907.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D] gi|308918172|gb|EFP63850.1| ribonucleoside-diphosphate reductase, beta subunit [Ralstonia sp. 5_7_47FAA] Length = 402 Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FI NRRC QIGL+ LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 338 NAPMFKGYLRFICNRRCQQIGLDALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397 Query: 121 ELKWD 125 L W+ Sbjct: 398 ALSWE 402 >gi|300309722|ref|YP_003773814.1| transmembrane ribonucleoside reductase small subunit [Herbaspirillum seropedicae SmR1] gi|300072507|gb|ADJ61906.1| transmembrane ribonucleoside reductase (small chain) protein [Herbaspirillum seropedicae SmR1] Length = 388 Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 78/125 (62%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN +K+ENPHLWT EF+++ +++ A LE YA +TMP+G +GL Sbjct: 264 LRDESMHCNFGIDLINTVKMENPHLWTPEFREEIKSLFLRAVELEYRYAEDTMPRGVLGL 323 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FIANRR QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 324 NAPMFKSYLRFIANRRAQQIGLDPLFAQEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 383 Query: 121 ELKWD 125 L W+ Sbjct: 384 ALSWE 388 >gi|289677030|ref|ZP_06497920.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. syringae FF5] Length = 243 Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 119 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 178 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 179 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 238 Query: 121 ELKWD 125 L WD Sbjct: 239 ALSWD 243 >gi|110833571|ref|YP_692430.1| ribonucleotide-diphosphate reductase subunit beta [Alcanivorax borkumensis SK2] gi|110646682|emb|CAL16158.1| ribonucleoside reductase, beta subunit [Alcanivorax borkumensis SK2] Length = 430 Score = 177 bits (449), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIK+ENPHLW + + K+ M+ E T LEI YA +TMP+G +G+ Sbjct: 306 LRDESMHVNFGIDVINQIKLENPHLWDAQMRDKATQMILEGTELEIQYARDTMPRGVLGM 365 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+QFIANRR Q+GL FK NPFPWMSE++DL+KEKNFFETRVTEYQ G Sbjct: 366 NAAMMEEYLQFIANRRLAQLGLPEQFKGVNNPFPWMSEIMDLRKEKNFFETRVTEYQVGG 425 Query: 121 ELKWD 125 L W+ Sbjct: 426 ALSWE 430 >gi|119713586|gb|ABL97637.1| ribonucleotide-diphosphate reductase beta subunit [uncultured marine bacterium EB0_39H12] Length = 412 Score = 177 bits (448), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIK+ENPHLW ++ + ++ M+ E T LEI YA +TMP+G +G+ Sbjct: 288 LRDESMHLNFGIDMINQIKLENPHLWDEQMRHEAAQMILEGTELEIQYARDTMPRGILGM 347 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+QFIANRR QIGLE F+ NPFPWMSE++DL+KEKNFFETRV EYQ G Sbjct: 348 NAGMMEEYLQFIANRRLVQIGLEEEFEGASNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 407 Query: 121 ELKWD 125 L WD Sbjct: 408 ALTWD 412 >gi|296160506|ref|ZP_06843322.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. Ch1-1] gi|295889255|gb|EFG69057.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. Ch1-1] Length = 415 Score = 177 bits (448), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 78/125 (62%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENP LWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 291 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 351 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L W+ Sbjct: 411 ALTWE 415 >gi|187925407|ref|YP_001897049.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia phytofirmans PsJN] gi|187716601|gb|ACD17825.1| Ribonucleoside-diphosphate reductase [Burkholderia phytofirmans PsJN] Length = 415 Score = 177 bits (448), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 78/125 (62%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENP LWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 291 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 351 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L W+ Sbjct: 411 ALTWE 415 >gi|186477386|ref|YP_001858856.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia phymatum STM815] gi|184193845|gb|ACC71810.1| Ribonucleoside-diphosphate reductase [Burkholderia phymatum STM815] Length = 407 Score = 177 bits (448), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 78/125 (62%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL Sbjct: 283 LRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIREIFKHAVDLEYRYAEDTMPRGVLGL 342 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIG++PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 343 NASMFKSYLRFICNRRCQQIGIDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 402 Query: 121 ELKWD 125 L W+ Sbjct: 403 ALSWE 407 >gi|74317993|ref|YP_315733.1| ribonucleotide-diphosphate reductase subunit beta [Thiobacillus denitrificans ATCC 25259] gi|74057488|gb|AAZ97928.1| ribonucleoside-diphosphate reductase beta chain [Thiobacillus denitrificans ATCC 25259] Length = 376 Score = 177 bits (448), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 77/125 (61%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN IK ENPHLWT EF+ + RT++ + LE YA +TMP+G +GL Sbjct: 252 LRDESMHCNFGIDLINTIKQENPHLWTSEFKAEIRTLIQKGVELEFRYAEDTMPRGVLGL 311 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 N+ ++Y++FI+NRRC QIGL+ +F NPFPWM+E+IDLKKEKNFFETRVTEYQ G Sbjct: 312 NSAQFKEYLRFISNRRCQQIGLDEMFPGVSNPFPWMAEMIDLKKEKNFFETRVTEYQTGG 371 Query: 121 ELKWD 125 L WD Sbjct: 372 ALSWD 376 >gi|148546452|ref|YP_001266554.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas putida F1] gi|148510510|gb|ABQ77370.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida F1] Length = 415 Score = 177 bits (448), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 351 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L WD Sbjct: 411 ALSWD 415 >gi|91785256|ref|YP_560462.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia xenovorans LB400] gi|91689210|gb|ABE32410.1| Ribonucleoside-diphosphate reductase [Burkholderia xenovorans LB400] Length = 411 Score = 177 bits (448), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 78/125 (62%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENP LWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 287 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 346 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 347 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 406 Query: 121 ELKWD 125 L W+ Sbjct: 407 ALTWE 411 >gi|170695324|ref|ZP_02886470.1| Ribonucleoside-diphosphate reductase [Burkholderia graminis C4D1M] gi|170139724|gb|EDT07906.1| Ribonucleoside-diphosphate reductase [Burkholderia graminis C4D1M] Length = 414 Score = 177 bits (448), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 78/125 (62%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENP LWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 290 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 349 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 350 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 409 Query: 121 ELKWD 125 L W+ Sbjct: 410 ALTWE 414 >gi|330815478|ref|YP_004359183.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia gladioli BSR3] gi|327367871|gb|AEA59227.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia gladioli BSR3] Length = 407 Score = 177 bits (448), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL Sbjct: 283 LRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIRELFKHAVELEYRYAEDTMPRGVLGL 342 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FIANRRC QIGL+ L+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 343 NASMFKSYLRFIANRRCQQIGLDALYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 402 Query: 121 ELKWD 125 L W+ Sbjct: 403 ALSWE 407 >gi|254483523|ref|ZP_05096750.1| ribonucleoside-diphosphate reductase, beta subunit [marine gamma proteobacterium HTCC2148] gi|214036244|gb|EEB76924.1| ribonucleoside-diphosphate reductase, beta subunit [marine gamma proteobacterium HTCC2148] Length = 425 Score = 177 bits (448), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+ENP+LWT+ FQQ+ M+ E T +EI YA +TMP+G +G+ Sbjct: 301 LRDESMHLNFGIDVINQIKLENPNLWTETFQQEVIQMILEGTEIEIQYARDTMPRGVLGM 360 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+ FIANRR Q+GL F +NPFPWMSE++DL+KEKNFFETRV EYQ G Sbjct: 361 NAAIMEEYLHFIANRRLSQLGLPEQFAGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 420 Query: 121 ELKWD 125 L WD Sbjct: 421 ALSWD 425 >gi|307731037|ref|YP_003908261.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1003] gi|307585572|gb|ADN58970.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1003] Length = 411 Score = 176 bits (447), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 78/125 (62%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENP LWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 287 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 346 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 347 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 406 Query: 121 ELKWD 125 L W+ Sbjct: 407 ALTWE 411 >gi|146308172|ref|YP_001188637.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas mendocina ymp] gi|145576373|gb|ABP85905.1| Ribonucleoside-diphosphate reductase [Pseudomonas mendocina ymp] Length = 416 Score = 176 bits (447), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW + + ++ M+ + T LEI YA +TMP+G +G+ Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAQMKDEATQMILQGTQLEIEYARDTMPRGVLGM 351 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411 Query: 121 ELKWD 125 L WD Sbjct: 412 ALSWD 416 >gi|104780527|ref|YP_607025.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas entomophila L48] gi|95109514|emb|CAK14215.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas entomophila L48] Length = 415 Score = 176 bits (447), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 351 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L WD Sbjct: 411 ALSWD 415 >gi|330504346|ref|YP_004381215.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas mendocina NK-01] gi|328918632|gb|AEB59463.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas mendocina NK-01] Length = 416 Score = 176 bits (447), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW + + ++ M+ + T LEI YA +TMP+G +G+ Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAQMKDEATQMILQGTQLEIEYARDTMPRGVLGM 351 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411 Query: 121 ELKWD 125 L WD Sbjct: 412 ALSWD 416 >gi|325272776|ref|ZP_08139120.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas sp. TJI-51] gi|324102083|gb|EGB99585.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas sp. TJI-51] Length = 416 Score = 176 bits (447), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411 Query: 121 ELKWD 125 L WD Sbjct: 412 ALSWD 416 >gi|170720377|ref|YP_001748065.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas putida W619] gi|169758380|gb|ACA71696.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida W619] Length = 416 Score = 176 bits (447), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411 Query: 121 ELKWD 125 L WD Sbjct: 412 ALSWD 416 >gi|327480258|gb|AEA83568.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas stutzeri DSM 4166] Length = 415 Score = 176 bits (447), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLW E + ++ M+ + T LEI YA +TMP+G +G+ Sbjct: 291 LRDESMHLNFGIDMINQIKIENPHLWNAEMKDEATQMILQGTQLEIEYARDTMPRGVLGM 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 351 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L WD Sbjct: 411 ALSWD 415 >gi|134095932|ref|YP_001101007.1| ribonucleotide-diphosphate reductase subunit beta [Herminiimonas arsenicoxydans] gi|133739835|emb|CAL62886.1| Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide reductase small subunit) [Herminiimonas arsenicoxydans] Length = 395 Score = 176 bits (447), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 78/125 (62%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN IK+ENPHLWT +F+ + + + A LE YA +TMP+G +GL Sbjct: 271 LRDESMHCNFGIDLINTIKLENPHLWTPQFRDEIKALFLRAVELEYRYAEDTMPRGVLGL 330 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FIANRR QIGLEP+F+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 331 NAPMFKGYLRFIANRRAQQIGLEPMFEQEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 390 Query: 121 ELKWD 125 L W+ Sbjct: 391 ALNWE 395 >gi|323527395|ref|YP_004229548.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1001] gi|323384397|gb|ADX56488.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1001] Length = 414 Score = 176 bits (447), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 78/125 (62%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENP LWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 290 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 349 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 350 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 409 Query: 121 ELKWD 125 L W+ Sbjct: 410 ALTWE 414 >gi|15596352|ref|NP_249846.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas aeruginosa PAO1] gi|107100605|ref|ZP_01364523.1| hypothetical protein PaerPA_01001630 [Pseudomonas aeruginosa PACS2] gi|116049087|ref|YP_792111.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas aeruginosa UCBPP-PA14] gi|152988648|ref|YP_001349579.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas aeruginosa PA7] gi|218892881|ref|YP_002441750.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas aeruginosa LESB58] gi|254239525|ref|ZP_04932847.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa 2192] gi|296390475|ref|ZP_06879950.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas aeruginosa PAb1] gi|313106126|ref|ZP_07792381.1| NrdB, tyrosyl radical-harboring component of class Ia ribonucleotide reductase [Pseudomonas aeruginosa 39016] gi|9947077|gb|AAG04544.1|AE004545_7 NrdB, tyrosyl radical-harboring component of class Ia ribonucleotide reductase [Pseudomonas aeruginosa PAO1] gi|115584308|gb|ABJ10323.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa UCBPP-PA14] gi|126192903|gb|EAZ56966.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa 2192] gi|150963806|gb|ABR85831.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa PA7] gi|187939552|gb|ACD38699.1| ribonucleoside reductase small chain [Pseudomonas aeruginosa] gi|218773109|emb|CAW28921.1| NrdB, tyrosyl radical-harboring component of class Ia ribonucleotide reductase [Pseudomonas aeruginosa LESB58] gi|310878883|gb|EFQ37477.1| NrdB, tyrosyl radical-harboring component of class Ia ribonucleotide reductase [Pseudomonas aeruginosa 39016] Length = 415 Score = 176 bits (446), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW + + ++ M+ + T LEI YA +TMP+G +G+ Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAQMKDEATQMILQGTQLEIEYARDTMPRGVLGM 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 351 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L WD Sbjct: 411 ALSWD 415 >gi|329902475|ref|ZP_08273120.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Oxalobacteraceae bacterium IMCC9480] gi|327548767|gb|EGF33404.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Oxalobacteraceae bacterium IMCC9480] Length = 416 Score = 176 bits (446), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 78/125 (62%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID++N IK+ENPHLWT EF+ + + + A LE YA +TMP+G +GL Sbjct: 292 LRDESMHCNFGIDLVNTIKMENPHLWTPEFRDEIKALFLTAVELEYRYAEDTMPRGVLGL 351 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FIANRR QIGLEP+F+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 352 NAPMFKGYLRFIANRRAQQIGLEPMFENEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 411 Query: 121 ELKWD 125 L W+ Sbjct: 412 ALSWE 416 >gi|26987912|ref|NP_743337.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas putida KT2440] gi|167035231|ref|YP_001670462.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas putida GB-1] gi|24982621|gb|AAN66801.1|AE016309_3 ribonucleoside reductase, beta subunit [Pseudomonas putida KT2440] gi|166861719|gb|ABZ00127.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida GB-1] gi|313497534|gb|ADR58900.1| NrdB [Pseudomonas putida BIRD-1] Length = 416 Score = 176 bits (446), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411 Query: 121 ELKWD 125 L WD Sbjct: 412 ALSWD 416 >gi|262373382|ref|ZP_06066661.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter junii SH205] gi|262313407|gb|EEY94492.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter junii SH205] Length = 427 Score = 176 bits (446), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 79/124 (63%), Positives = 97/124 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+ Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423 Query: 121 ELKW 124 L W Sbjct: 424 ALSW 427 >gi|293609145|ref|ZP_06691448.1| ribonucleoside-diphosphate reductase [Acinetobacter sp. SH024] gi|292829718|gb|EFF88080.1| ribonucleoside-diphosphate reductase [Acinetobacter sp. SH024] Length = 427 Score = 176 bits (446), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 79/124 (63%), Positives = 97/124 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+ Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVVQMIVEGTMLEIEYARDTMPRGVLGM 363 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423 Query: 121 ELKW 124 L W Sbjct: 424 ALSW 427 >gi|146282010|ref|YP_001172163.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas stutzeri A1501] gi|145570215|gb|ABP79321.1| ribonucleoside reductase, small chain [Pseudomonas stutzeri A1501] Length = 415 Score = 176 bits (446), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLW E + ++ M+ + T LEI YA +TMP+G +G+ Sbjct: 291 LRDESMHLNFGIDMINQIKIENPHLWDAEMKDEATQMILQGTQLEIEYARDTMPRGVLGM 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 351 NASMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L WD Sbjct: 411 ALSWD 415 >gi|325121074|gb|ADY80597.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter calcoaceticus PHEA-2] Length = 370 Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 79/124 (63%), Positives = 97/124 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+ Sbjct: 247 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVVQMIVEGTMLEIEYARDTMPRGVLGM 306 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 307 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 366 Query: 121 ELKW 124 L W Sbjct: 367 ALSW 370 >gi|255318309|ref|ZP_05359544.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter radioresistens SK82] gi|262379054|ref|ZP_06072210.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter radioresistens SH164] gi|255304621|gb|EET83803.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter radioresistens SK82] gi|262298511|gb|EEY86424.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter radioresistens SH164] Length = 427 Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 79/124 (63%), Positives = 98/124 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+ Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEIIQMILEGTMLEIEYARDTMPRGVLGM 363 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR +Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 364 NAAMMEEYLKFICNRRLNQLGLPEQFAGVNNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423 Query: 121 ELKW 124 L W Sbjct: 424 ALSW 427 >gi|332852155|ref|ZP_08433982.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter baumannii 6013150] gi|332867554|ref|ZP_08437707.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter baumannii 6013113] gi|332729527|gb|EGJ60866.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter baumannii 6013150] gi|332733971|gb|EGJ65116.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter baumannii 6013113] Length = 440 Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 79/124 (63%), Positives = 97/124 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+ Sbjct: 317 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 376 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 377 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 436 Query: 121 ELKW 124 L W Sbjct: 437 ALSW 440 >gi|312795100|ref|YP_004028022.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia rhizoxinica HKI 454] gi|312166875|emb|CBW73878.1| Ribonucleoside-diphosphate reductase beta chain (EC 1.17.4.1) [Burkholderia rhizoxinica HKI 454] Length = 416 Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT F+++ + A LE YA +TMP+G +GL Sbjct: 292 LRDESMHCNFGIDLINQIKLENPHLWTPAFREEICGLFKHAVELEYRYAEDTMPRGVLGL 351 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIGLEPLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 352 NAGMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 411 Query: 121 ELKWD 125 L W+ Sbjct: 412 ALSWE 416 >gi|332872596|ref|ZP_08440564.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter baumannii 6014059] gi|332739125|gb|EGJ69984.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter baumannii 6014059] Length = 440 Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 79/124 (63%), Positives = 97/124 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+ Sbjct: 317 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 376 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 377 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 436 Query: 121 ELKW 124 L W Sbjct: 437 ALSW 440 >gi|260551040|ref|ZP_05825245.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter sp. RUH2624] gi|260405988|gb|EEW99475.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter sp. RUH2624] Length = 427 Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 79/124 (63%), Positives = 97/124 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+ Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423 Query: 121 ELKW 124 L W Sbjct: 424 ALSW 427 >gi|254429337|ref|ZP_05043044.1| ribonucleoside-diphosphate reductase, beta subunit [Alcanivorax sp. DG881] gi|196195506|gb|EDX90465.1| ribonucleoside-diphosphate reductase, beta subunit [Alcanivorax sp. DG881] Length = 355 Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 78/125 (62%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIK+ENPHLW + + K+ M+ E LEI YA +TMP+G +G+ Sbjct: 231 LRDESMHVNFGIDVINQIKLENPHLWDAQMRDKATQMILEGAELEIQYARDTMPRGVLGM 290 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+QFIANRR Q+GL FK NPFPWMSE++DL+KEKNFFETRVTEYQ G Sbjct: 291 NAAMMEEYLQFIANRRLAQLGLPEQFKGVNNPFPWMSEIMDLRKEKNFFETRVTEYQVGG 350 Query: 121 ELKWD 125 L W+ Sbjct: 351 ALSWE 355 >gi|169634186|ref|YP_001707922.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter baumannii SDF] gi|169152978|emb|CAP02026.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter baumannii] Length = 427 Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 79/124 (63%), Positives = 97/124 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+ Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423 Query: 121 ELKW 124 L W Sbjct: 424 ALSW 427 >gi|126640804|ref|YP_001083788.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter baumannii ATCC 17978] gi|322506921|gb|ADX02375.1| nrdB [Acinetobacter baumannii 1656-2] gi|323516789|gb|ADX91170.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter baumannii TCDC-AB0715] Length = 361 Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 79/124 (63%), Positives = 97/124 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+ Sbjct: 238 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 297 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 298 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 357 Query: 121 ELKW 124 L W Sbjct: 358 ALSW 361 >gi|169797064|ref|YP_001714857.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter baumannii AYE] gi|213156529|ref|YP_002318190.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter baumannii AB0057] gi|215484526|ref|YP_002326761.1| ribonucleotide-diphosphate reductase small chain [Acinetobacter baumannii AB307-0294] gi|239501302|ref|ZP_04660612.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter baumannii AB900] gi|260555643|ref|ZP_05827863.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter baumannii ATCC 19606] gi|301345633|ref|ZP_07226374.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter baumannii AB056] gi|301512780|ref|ZP_07238017.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter baumannii AB058] gi|301596291|ref|ZP_07241299.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter baumannii AB059] gi|169149991|emb|CAM87885.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter baumannii AYE] gi|193076530|gb|ABO11186.2| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter baumannii ATCC 17978] gi|213055689|gb|ACJ40591.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter baumannii AB0057] gi|213987168|gb|ACJ57467.1| ribonucleotide-diphosphate reductase small chain [Acinetobacter baumannii AB307-0294] gi|260410554|gb|EEX03852.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter baumannii ATCC 19606] Length = 427 Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 79/124 (63%), Positives = 97/124 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+ Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423 Query: 121 ELKW 124 L W Sbjct: 424 ALSW 427 >gi|184157022|ref|YP_001845361.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter baumannii ACICU] gi|183208616|gb|ACC56014.1| Ribonucleotide reductase, beta subunit [Acinetobacter baumannii ACICU] Length = 427 Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 79/124 (63%), Positives = 97/124 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+ Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423 Query: 121 ELKW 124 L W Sbjct: 424 ALSW 427 >gi|262280153|ref|ZP_06057938.1| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter calcoaceticus RUH2202] gi|262260504|gb|EEY79237.1| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter calcoaceticus RUH2202] Length = 427 Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 78/124 (62%), Positives = 97/124 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLW+ EFQQ+ M+ E T+LEI YA +TMP+G +G+ Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWSAEFQQEVVQMIVEGTMLEIEYARDTMPRGVLGM 363 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423 Query: 121 ELKW 124 L W Sbjct: 424 ALSW 427 >gi|153208286|ref|ZP_01946665.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella burnetii 'MSU Goat Q177'] gi|165919229|ref|ZP_02219315.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella burnetii RSA 334] gi|212219268|ref|YP_002306055.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella burnetii CbuK_Q154] gi|120576070|gb|EAX32694.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella burnetii 'MSU Goat Q177'] gi|165917090|gb|EDR35694.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella burnetii RSA 334] gi|212013530|gb|ACJ20910.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii CbuK_Q154] Length = 401 Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 81/125 (64%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIKIENPHLW K FQ++ M+ E LE YA +TMP+G +GL Sbjct: 276 LRDESMHVNFGIDVINQIKIENPHLWNKNFQKEVIEMILEGVELEYQYAKDTMPRGILGL 335 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+Q+IANRRC QIGL F +N FPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 336 NANMFKDYLQYIANRRCAQIGLPEQFPGAKNTFPWMSEMMDLKKEKNFFETRVIEYQAGG 395 Query: 121 ELKWD 125 LKWD Sbjct: 396 TLKWD 400 >gi|212212091|ref|YP_002303027.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella burnetii CbuG_Q212] gi|212010501|gb|ACJ17882.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii CbuG_Q212] Length = 401 Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 81/125 (64%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIKIENPHLW K FQ++ M+ E LE YA +TMP+G +GL Sbjct: 276 LRDESMHVNFGIDVINQIKIENPHLWNKNFQKEVIEMILEGVELEYQYAKDTMPRGILGL 335 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+Q+IANRRC QIGL F +N FPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 336 NANMFKDYLQYIANRRCAQIGLPEQFPGAKNTFPWMSEMMDLKKEKNFFETRVIEYQAGG 395 Query: 121 ELKWD 125 LKWD Sbjct: 396 TLKWD 400 >gi|29654845|ref|NP_820537.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella burnetii RSA 493] gi|154705923|ref|YP_001423853.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella burnetii Dugway 5J108-111] gi|161831080|ref|YP_001597389.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella burnetii RSA 331] gi|29542113|gb|AAO91051.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii RSA 493] gi|154355209|gb|ABS76671.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii Dugway 5J108-111] gi|161762947|gb|ABX78589.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella burnetii RSA 331] Length = 401 Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 81/125 (64%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIKIENPHLW K FQ++ M+ E LE YA +TMP+G +GL Sbjct: 276 LRDESMHVNFGIDVINQIKIENPHLWNKNFQKEVIEMILEGVELEYQYAKDTMPRGILGL 335 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+Q+IANRRC QIGL F +N FPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 336 NANMFKDYLQYIANRRCAQIGLPEQFPGAKNTFPWMSEMMDLKKEKNFFETRVIEYQAGG 395 Query: 121 ELKWD 125 LKWD Sbjct: 396 TLKWD 400 >gi|50083944|ref|YP_045454.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter sp. ADP1] gi|49529920|emb|CAG67632.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter sp. ADP1] Length = 427 Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 78/124 (62%), Positives = 98/124 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGID+INQIKIENPHLWT EFQQ+ M+ E TLLEI YA +TMP+G +G+ Sbjct: 304 LRDESMHVNFGIDMINQIKIENPHLWTAEFQQEVIQMIVEGTLLEIEYARDTMPRGVLGM 363 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL ++ NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 364 NAAMMEEYLKFICNRRLAQLGLPEQYRGVNNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423 Query: 121 ELKW 124 L W Sbjct: 424 ALSW 427 >gi|299771426|ref|YP_003733452.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter sp. DR1] gi|298701514|gb|ADI92079.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter sp. DR1] Length = 427 Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 78/124 (62%), Positives = 97/124 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLW+ EFQQ+ M+ E T+LEI YA +TMP+G +G+ Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWSAEFQQEVVQMIVEGTMLEIEYARDTMPRGVLGM 363 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423 Query: 121 ELKW 124 L W Sbjct: 424 ALSW 427 >gi|226945386|ref|YP_002800459.1| ribonucleotide-diphosphate reductase subunit beta [Azotobacter vinelandii DJ] gi|226720313|gb|ACO79484.1| Ribonucleoside-diphosphate reductase beta subunit [Azotobacter vinelandii DJ] Length = 416 Score = 174 bits (441), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 78/125 (62%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLW E + ++ M+ + T LEI YA +TMP+G +G+ Sbjct: 292 LRDESMHLNFGIDMINQIKIENPHLWDAEMKDEATQMILQGTQLEIEYARDTMPRGVLGM 351 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR Q+GL + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 352 NATMMEDYLKFIANRRLSQLGLPEQYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411 Query: 121 ELKWD 125 L WD Sbjct: 412 ALSWD 416 >gi|119478322|ref|ZP_01618353.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma proteobacterium HTCC2143] gi|119448662|gb|EAW29907.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma proteobacterium HTCC2143] Length = 422 Score = 174 bits (441), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 76/125 (60%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+ENP LW+++FQQ+ M+ E T LEI YA ++MP+G +G+ Sbjct: 298 LRDESMHLNFGIDVINQIKLENPQLWSEKFQQEIIQMILEGTQLEIEYARDSMPRGVLGM 357 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+QFI+NRR +Q+GL ++ +NPFPWMSE++DL+KEKNFFETRV EYQ G Sbjct: 358 NAAMMEEYLQFISNRRLNQLGLPEQYQGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 417 Query: 121 ELKWD 125 L W+ Sbjct: 418 ALNWE 422 >gi|88812072|ref|ZP_01127324.1| ribonucleotide-diphosphate reductase beta subunit [Nitrococcus mobilis Nb-231] gi|88790576|gb|EAR21691.1| ribonucleotide-diphosphate reductase beta subunit [Nitrococcus mobilis Nb-231] Length = 370 Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 78/125 (62%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK ENPHLWT EFQ ++ + E+ LE+ YA +T+P+G +GL Sbjct: 246 LRDESIHLNFGIDVINQIKQENPHLWTAEFQATAQRTILESMALEVDYARDTLPRGVLGL 305 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR QIGL F ENP PWMSE++DLKKEKNFFETRVTEY+ G Sbjct: 306 NAAMIEEYLRFITNRRLAQIGLTEAFPGAENPLPWMSELVDLKKEKNFFETRVTEYRTGG 365 Query: 121 ELKWD 125 L W+ Sbjct: 366 ALSWE 370 >gi|294339031|emb|CAZ87378.1| putative Ribonucleoside-diphosphate reductase (ribonucleoside diphosphate reductase, beta subunit) [Thiomonas sp. 3As] Length = 410 Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 77/125 (61%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID++NQIK+ENPHLWT EF+++ + H+A LE YA +TMP+G +GL Sbjct: 286 LRDESMHTNFGIDLVNQIKLENPHLWTPEFKRELTGLFHQAVELEYRYAEDTMPRGVLGL 345 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FIANRR QIGL+ +F ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 346 NASMFKGYLRFIANRRAVQIGLDAIFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 405 Query: 121 ELKWD 125 L W+ Sbjct: 406 ALSWE 410 >gi|224825450|ref|ZP_03698555.1| Ribonucleoside-diphosphate reductase [Lutiella nitroferrum 2002] gi|224602371|gb|EEG08549.1| Ribonucleoside-diphosphate reductase [Lutiella nitroferrum 2002] Length = 360 Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN +K ENP LWT+EF+ + + A LE AYA +TMP+G +GL Sbjct: 236 LRDESMHCNFGIDLINTVKQENPQLWTEEFKAEITGLFKHAVELEYAYAEDTMPRGVLGL 295 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA ++Y++FIANRR QIGLEP+F NPFPWMSE+IDLKKEKNFFETRVTEYQ G Sbjct: 296 NAAMFKEYLRFIANRRMQQIGLEPMFPGVTNPFPWMSEMIDLKKEKNFFETRVTEYQTGG 355 Query: 121 ELKWD 125 L WD Sbjct: 356 ALSWD 360 >gi|34497739|ref|NP_901954.1| ribonucleotide-diphosphate reductase subunit beta [Chromobacterium violaceum ATCC 12472] gi|34103595|gb|AAQ59956.1| ribonucleoside-diphosphate reductase system [Chromobacterium violaceum ATCC 12472] Length = 360 Score = 174 bits (440), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN IK+ENP LWT F+ + + +A LE AYA +TMP+G +GL Sbjct: 236 LRDESMHCNFGIDLINTIKLENPLLWTDSFKAEIVDLFKQAVELEYAYAEDTMPRGVLGL 295 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA ++Y++FIANRR QIGL+PLF NPFPWMSE+IDLKKEKNFFETRVTEYQ G Sbjct: 296 NASMFKEYLRFIANRRMQQIGLDPLFPGVNNPFPWMSEMIDLKKEKNFFETRVTEYQTGG 355 Query: 121 ELKWD 125 L WD Sbjct: 356 ALSWD 360 >gi|296135014|ref|YP_003642256.1| Ribonucleoside-diphosphate reductase [Thiomonas intermedia K12] gi|295795136|gb|ADG29926.1| Ribonucleoside-diphosphate reductase [Thiomonas intermedia K12] Length = 402 Score = 174 bits (440), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 77/125 (61%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID++NQIK+ENPHLWT EF+++ + H+A LE YA +TMP+G +GL Sbjct: 278 LRDESMHTNFGIDLVNQIKLENPHLWTPEFKRELTGLFHQAVELEYRYAEDTMPRGVLGL 337 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FIANRR QIGL+ +F ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 338 NASMFKGYLRFIANRRAVQIGLDAIFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 397 Query: 121 ELKWD 125 L W+ Sbjct: 398 ALSWE 402 >gi|299533977|ref|ZP_07047329.1| ribonucleotide-diphosphate reductase subunit beta [Comamonas testosteroni S44] gi|298717886|gb|EFI58891.1| ribonucleotide-diphosphate reductase subunit beta [Comamonas testosteroni S44] Length = 363 Score = 174 bits (440), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 78/125 (62%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENPHLWT EF+Q+ + +A LE YA +TMP+G +G+ Sbjct: 239 LRDESMHCNFGIDLINQLKLENPHLWTAEFKQEITELFQKAVELEYRYAEDTMPRGVLGM 298 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 299 NASMFKGYLRYIANRRATQIGLEELFPGEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 358 Query: 121 ELKWD 125 L WD Sbjct: 359 ALSWD 363 >gi|91787004|ref|YP_547956.1| ribonucleotide-diphosphate reductase subunit beta [Polaromonas sp. JS666] gi|91696229|gb|ABE43058.1| Ribonucleoside-diphosphate reductase [Polaromonas sp. JS666] Length = 406 Score = 174 bits (440), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 78/125 (62%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENPHLWT EF+ + + + +A LE YA +TMP+G +GL Sbjct: 282 LRDESMHCNFGIDLINQLKLENPHLWTAEFKAEIKALFLKAVELEYRYAEDTMPRGVLGL 341 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 342 NASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 401 Query: 121 ELKWD 125 L WD Sbjct: 402 ALSWD 406 >gi|221065168|ref|ZP_03541273.1| Ribonucleoside-diphosphate reductase [Comamonas testosteroni KF-1] gi|220710191|gb|EED65559.1| Ribonucleoside-diphosphate reductase [Comamonas testosteroni KF-1] Length = 363 Score = 173 bits (439), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 78/125 (62%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENPHLWT EF+Q+ + A LE YA +TMP+G +G+ Sbjct: 239 LRDESMHCNFGIDLINQLKLENPHLWTAEFKQEITELFQRAVELEYRYAEDTMPRGVLGM 298 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 299 NASMFKGYLRYIANRRATQIGLEELFPGEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 358 Query: 121 ELKWD 125 L WD Sbjct: 359 ALSWD 363 >gi|326315613|ref|YP_004233285.1| ribonucleoside-diphosphate reductase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372449|gb|ADX44718.1| Ribonucleoside-diphosphate reductase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 387 Score = 173 bits (439), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 77/125 (61%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENPHLWT EF+++ + + +A LE YA +TMP+G +G+ Sbjct: 263 LRDESMHCNFGIDLINQLKLENPHLWTAEFKEEIKGLFMKAVELEYQYAEDTMPRGVLGM 322 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 323 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 382 Query: 121 ELKWD 125 L WD Sbjct: 383 ALSWD 387 >gi|313200886|ref|YP_004039544.1| ribonucleoside-diphosphate reductase [Methylovorus sp. MP688] gi|312440202|gb|ADQ84308.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. MP688] Length = 381 Score = 173 bits (438), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 75/125 (60%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN +K+ENPHLWT EF+++ + ++ +A LE YA +TMP+G +GL Sbjct: 257 LRDESMHCNFGIDLINTLKLENPHLWTPEFREEIKRLMQQAVELEYRYAEDTMPRGVLGL 316 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA ++Y++FIANRR QIG++ L+ NPFPWMSE++DLKKEKNFFETRVTEYQ G Sbjct: 317 NAAMFKEYLRFIANRRMQQIGIDALYPGASNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 376 Query: 121 ELKWD 125 L WD Sbjct: 377 ALSWD 381 >gi|264680215|ref|YP_003280125.1| ribonucleotide reductase [Comamonas testosteroni CNB-2] gi|262210731|gb|ACY34829.1| ribonucleotide reductase [Comamonas testosteroni CNB-2] Length = 336 Score = 173 bits (438), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 78/125 (62%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENPHLWT EF+Q+ + +A LE YA +TMP+G +G+ Sbjct: 212 LRDESMHCNFGIDLINQLKLENPHLWTAEFKQEITELFQKAVELEYRYAEDTMPRGVLGM 271 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 272 NASMFKGYLRYIANRRATQIGLEELFPGEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 331 Query: 121 ELKWD 125 L WD Sbjct: 332 ALSWD 336 >gi|253998799|ref|YP_003050862.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. SIP3-4] gi|253985478|gb|ACT50335.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. SIP3-4] Length = 383 Score = 173 bits (438), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 75/125 (60%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN +K+ENPHLWT EF+++ + ++ +A LE YA +TMP+G +GL Sbjct: 259 LRDESMHCNFGIDLINTLKLENPHLWTPEFREEIKRLMQQAVELEYRYAEDTMPRGVLGL 318 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA ++Y++FIANRR QIG++ L+ NPFPWMSE++DLKKEKNFFETRVTEYQ G Sbjct: 319 NAAMFKEYLRFIANRRMQQIGIDALYPGASNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 378 Query: 121 ELKWD 125 L WD Sbjct: 379 ALSWD 383 >gi|120609557|ref|YP_969235.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax citrulli AAC00-1] gi|120588021|gb|ABM31461.1| Ribonucleoside-diphosphate reductase [Acidovorax citrulli AAC00-1] Length = 387 Score = 173 bits (438), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 77/125 (61%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENPHLWT EF+++ + + +A LE YA +TMP+G +G+ Sbjct: 263 LRDESMHCNFGIDLINQLKLENPHLWTAEFKEEIKGLFMKAVELEYQYAEDTMPRGVLGM 322 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 323 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 382 Query: 121 ELKWD 125 L WD Sbjct: 383 ALSWD 387 >gi|121595925|ref|YP_987821.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax sp. JS42] gi|222112113|ref|YP_002554377.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax ebreus TPSY] gi|120608005|gb|ABM43745.1| Ribonucleoside-diphosphate reductase [Acidovorax sp. JS42] gi|221731557|gb|ACM34377.1| Ribonucleoside-diphosphate reductase [Acidovorax ebreus TPSY] Length = 396 Score = 173 bits (438), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 77/125 (61%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENPHLWT EF+ + + + +A LE YA +TMP+G +G+ Sbjct: 272 LRDESMHCNFGIDLINQLKLENPHLWTAEFKDEIKALFIKAVELEYRYAEDTMPRGVLGM 331 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 332 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 391 Query: 121 ELKWD 125 L WD Sbjct: 392 ALSWD 396 >gi|332530699|ref|ZP_08406630.1| ribonucleotide-diphosphate reductase subunit beta [Hylemonella gracilis ATCC 19624] gi|332039867|gb|EGI76262.1| ribonucleotide-diphosphate reductase subunit beta [Hylemonella gracilis ATCC 19624] Length = 399 Score = 173 bits (438), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 78/125 (62%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENP LWT EF+ + R + +A LE YA +TMP+G +G+ Sbjct: 275 LRDESMHCNFGIDLINQIKLENPQLWTPEFKAEIRGLFEKAVELEYRYAEDTMPRGVLGM 334 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 335 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 394 Query: 121 ELKWD 125 L WD Sbjct: 395 ALSWD 399 >gi|255019430|ref|ZP_05291537.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Acidithiobacillus caldus ATCC 51756] gi|254971128|gb|EET28583.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Acidithiobacillus caldus ATCC 51756] Length = 345 Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 75/125 (60%), Positives = 100/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENP LWT+ FQQ+ ++ + LE AYA +TMP+G +GL Sbjct: 220 LRDESMHCNFGIDLINQIKLENPQLWTEGFQQEIVGLIRQGVELECAYADDTMPRGILGL 279 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP ++Y+++I NRR QIGL+P ++ +NPFPWMSE++DLKKEKNFFE+RVT+YQ G Sbjct: 280 NAPMFKEYVRYIGNRRLSQIGLKPQWENVQNPFPWMSEMMDLKKEKNFFESRVTDYQTGG 339 Query: 121 ELKWD 125 L WD Sbjct: 340 ALSWD 344 >gi|241764092|ref|ZP_04762129.1| Ribonucleoside-diphosphate reductase [Acidovorax delafieldii 2AN] gi|241366556|gb|EER61044.1| Ribonucleoside-diphosphate reductase [Acidovorax delafieldii 2AN] Length = 398 Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 77/125 (61%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENPHLWT EF+ + + + A LE YA +TMP+G +G+ Sbjct: 274 LRDESMHCNFGIDLINQLKLENPHLWTAEFKAEIKALFMRAVELEYRYAEDTMPRGVLGM 333 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 334 NASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 393 Query: 121 ELKWD 125 L WD Sbjct: 394 ALSWD 398 >gi|124268397|ref|YP_001022401.1| ribonucleotide-diphosphate reductase subunit beta [Methylibium petroleiphilum PM1] gi|124261172|gb|ABM96166.1| Ribonucleoside-diphosphate reductase [Methylibium petroleiphilum PM1] Length = 403 Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 78/125 (62%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENP LWT EF+ + + + +A LE YA +TMP+G +GL Sbjct: 279 LRDESMHCNFGIDLINQIKLENPQLWTAEFKAEIKALFMKAVELEYRYAEDTMPRGVLGL 338 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 339 NASMFKGYLRYIANRRATQIGLEELFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 398 Query: 121 ELKWD 125 L WD Sbjct: 399 ALSWD 403 >gi|52842002|ref|YP_095801.1| ribonucleotide-diphosphate reductase subunit beta [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629113|gb|AAU27854.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 381 Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 95/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIKIENPHLWT EF+ + ++ E LE YA +TMP G +G+ Sbjct: 255 LRDESMHMNFGIDVINQIKIENPHLWTPEFKNEMIQLIREGVELEYQYARDTMPHGILGM 314 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+ FIANRR +QIGL + ENPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 315 NAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFFETRVIEYQAGG 374 Query: 121 ELKWD 125 L WD Sbjct: 375 TLSWD 379 >gi|226953559|ref|ZP_03824023.1| ribonucleotide reductase, beta subunit [Acinetobacter sp. ATCC 27244] gi|294649451|ref|ZP_06726876.1| ribonucleotide-diphosphate reductase beta subunit [Acinetobacter haemolyticus ATCC 19194] gi|226835696|gb|EEH68079.1| ribonucleotide reductase, beta subunit [Acinetobacter sp. ATCC 27244] gi|292824656|gb|EFF83434.1| ribonucleotide-diphosphate reductase beta subunit [Acinetobacter haemolyticus ATCC 19194] Length = 427 Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 78/124 (62%), Positives = 96/124 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLWT FQQ+ M+ E T+LEI YA +TMP+G +G+ Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTATFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 364 NASMMEEYLKFICNRRLAQLGLPEQFAGVTNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423 Query: 121 ELKW 124 L W Sbjct: 424 ALSW 427 >gi|148359319|ref|YP_001250526.1| ribonucleoside-diphosphate reductase subunit beta [Legionella pneumophila str. Corby] gi|296107366|ref|YP_003619066.1| ribonucleoside-diphosphate reductase beta chain [Legionella pneumophila 2300/99 Alcoy] gi|148281092|gb|ABQ55180.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella pneumophila str. Corby] gi|295649267|gb|ADG25114.1| ribonucleoside-diphosphate reductase beta chain [Legionella pneumophila 2300/99 Alcoy] gi|307610475|emb|CBX00047.1| hypothetical protein LPW_18021 [Legionella pneumophila 130b] Length = 367 Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 95/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIKIENPHLWT EF+ + ++ E LE YA +TMP G +G+ Sbjct: 241 LRDESMHMNFGIDVINQIKIENPHLWTPEFKNEMIQLIREGVELEYQYARDTMPHGILGM 300 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+ FIANRR +QIGL + ENPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 301 NAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFFETRVIEYQAGG 360 Query: 121 ELKWD 125 L WD Sbjct: 361 TLSWD 365 >gi|54294662|ref|YP_127077.1| ribonucleotide-diphosphate reductase subunit beta [Legionella pneumophila str. Lens] gi|53754494|emb|CAH15978.1| hypothetical protein lpl1739 [Legionella pneumophila str. Lens] Length = 367 Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 95/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIKIENPHLWT EF+ + ++ E LE YA +TMP G +G+ Sbjct: 241 LRDESMHMNFGIDVINQIKIENPHLWTPEFKNEIIQLIREGVELEYQYARDTMPHGILGM 300 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+ FIANRR +QIGL + ENPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 301 NAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFFETRVIEYQAGG 360 Query: 121 ELKWD 125 L WD Sbjct: 361 TLSWD 365 >gi|54297688|ref|YP_124057.1| ribonucleotide-diphosphate reductase subunit beta [Legionella pneumophila str. Paris] gi|53751473|emb|CAH12891.1| hypothetical protein lpp1739 [Legionella pneumophila str. Paris] Length = 367 Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 79/125 (63%), Positives = 95/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIKIENPHLWT EF+ + ++ E LE YA +TMP G +G+ Sbjct: 241 LRDESMHMNFGIDVINQIKIENPHLWTPEFKNEIIQLIREGVELEYQYARDTMPHGILGM 300 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+ FIANRR +QIGL + ENPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 301 NAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFFETRVIEYQAGG 360 Query: 121 ELKWD 125 L WD Sbjct: 361 TLSWD 365 >gi|262376783|ref|ZP_06070011.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter lwoffii SH145] gi|262308493|gb|EEY89628.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter lwoffii SH145] Length = 427 Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 78/124 (62%), Positives = 97/124 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENP LWT EFQ++ M+ E T+LEI YA +TMP+G +G+ Sbjct: 304 LRDESMHLNFGIDMINQIKIENPGLWTTEFQEEIIQMILEGTMLEIEYARDTMPRGVLGM 363 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FIANRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 364 NAGMMEEYLKFIANRRLAQLGLPEQFAGVNNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423 Query: 121 ELKW 124 L W Sbjct: 424 ALSW 427 >gi|145588393|ref|YP_001154990.1| ribonucleotide-diphosphate reductase subunit beta [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046799|gb|ABP33426.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 394 Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 75/125 (60%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENP LWT F+ + +++ +A LE YA +TMP+G +GL Sbjct: 270 LRDESMHCNFGIDLINQIKLENPQLWTSAFKDEIKSIFEKAVELEYRYAEDTMPRGVLGL 329 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y+++I NRRC QIGL+ +F ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 330 NAPMFKGYLRYICNRRCLQIGLDAMFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 389 Query: 121 ELKWD 125 L W+ Sbjct: 390 ALSWE 394 >gi|158341282|ref|YP_001522354.1| ribonucleotide-diphosphate reductase subunit beta [Acaryochloris marina MBIC11017] gi|158311523|gb|ABW33134.1| ribonucleoside-diphosphate reductase, beta subunit [Acaryochloris marina MBIC11017] Length = 384 Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 76/125 (60%), Positives = 95/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID++N IK ENPHLWT EF ++ R + A LE YA +TMP+G +GL Sbjct: 260 LRDESMHCNFGIDLVNAIKQENPHLWTPEFCEEIRDLFKRAVELEYRYAEDTMPRGVLGL 319 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGL+P+F ENPFPWMSE++DLKKE+NFFETRV EYQ G Sbjct: 320 NASMFKSYLRYIANRRSQQIGLDPIFASEENPFPWMSEMVDLKKERNFFETRVLEYQTGG 379 Query: 121 ELKWD 125 L WD Sbjct: 380 ALSWD 384 >gi|254496936|ref|ZP_05109775.1| ribonucleotide-diphosphate reductase subunit beta [Legionella drancourtii LLAP12] gi|254353845|gb|EET12541.1| ribonucleotide-diphosphate reductase subunit beta [Legionella drancourtii LLAP12] Length = 369 Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 77/125 (61%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIKIENPHLWT EF+++ ++ + +E YA +TMP G +G+ Sbjct: 240 LRDESMHMNFGIDVINQIKIENPHLWTPEFKEEIIQLIKDGVAMEYQYAKDTMPHGILGM 299 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+ FIANRR +QIGL + ENPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 300 NAEMFEEYLHFIANRRLNQIGLPEQYPGAENPFPWMSEMMDLKKEKNFFETRVIEYQAGG 359 Query: 121 ELKWD 125 L WD Sbjct: 360 TLSWD 364 >gi|89902117|ref|YP_524588.1| ribonucleotide-diphosphate reductase subunit beta [Rhodoferax ferrireducens T118] gi|89346854|gb|ABD71057.1| Ribonucleoside-diphosphate reductase [Rhodoferax ferrireducens T118] Length = 400 Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 76/125 (60%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENP LWT EF+ + + + +A LE YA +TMP+G +G+ Sbjct: 276 LRDESMHCNFGIDLINQLKLENPQLWTSEFKAEIKALFEQAVELEYRYAEDTMPRGVLGM 335 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 336 NASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 395 Query: 121 ELKWD 125 L WD Sbjct: 396 ALSWD 400 >gi|332526550|ref|ZP_08402662.1| ribonucleotide-diphosphate reductase subunit beta [Rubrivivax benzoatilyticus JA2] gi|332110818|gb|EGJ10995.1| ribonucleotide-diphosphate reductase subunit beta [Rubrivivax benzoatilyticus JA2] Length = 385 Score = 170 bits (431), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 76/125 (60%), Positives = 94/125 (75%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENP LWT F+ + R + A LE YA +TMP+G +G+ Sbjct: 261 LRDESMHCNFGIDLINQIKLENPQLWTPAFKAEIRALFERAVELEYRYAEDTMPRGVLGM 320 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV +YQ G Sbjct: 321 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIDYQSGG 380 Query: 121 ELKWD 125 L WD Sbjct: 381 ALSWD 385 >gi|262369327|ref|ZP_06062655.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter johnsonii SH046] gi|262315395|gb|EEY96434.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter johnsonii SH046] Length = 427 Score = 170 bits (431), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 77/124 (62%), Positives = 96/124 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENP LWT EFQ++ M+ E T+LEI YA +TMP+G +G+ Sbjct: 304 LRDESMHLNFGIDMINQIKIENPSLWTAEFQEEIIQMILEGTMLEIEYARDTMPRGVLGM 363 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 364 NAAMMEEYLKFICNRRLAQLGLPEQFAGVNNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423 Query: 121 ELKW 124 L W Sbjct: 424 ALSW 427 >gi|121606275|ref|YP_983604.1| ribonucleotide-diphosphate reductase subunit beta [Polaromonas naphthalenivorans CJ2] gi|120595244|gb|ABM38683.1| Ribonucleoside-diphosphate reductase [Polaromonas naphthalenivorans CJ2] Length = 387 Score = 170 bits (431), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 77/125 (61%), Positives = 95/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENP LWT EF+ + + +A LE YA +TMP+G +GL Sbjct: 263 LRDESMHCNFGIDLINQLKLENPQLWTAEFKAEINALFMKAVELEYRYAEDTMPRGVLGL 322 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 323 NASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 382 Query: 121 ELKWD 125 L WD Sbjct: 383 ALSWD 387 >gi|270156779|ref|ZP_06185436.1| ribonucleotide-diphosphate reductase beta subunit [Legionella longbeachae D-4968] gi|289164772|ref|YP_003454910.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella longbeachae NSW150] gi|269988804|gb|EEZ95058.1| ribonucleotide-diphosphate reductase beta subunit [Legionella longbeachae D-4968] gi|288857945|emb|CBJ11805.1| putative ribonucleoside-diphosphate reductase, beta subunit [Legionella longbeachae NSW150] Length = 366 Score = 170 bits (430), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 77/125 (61%), Positives = 95/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIKIENPHLWT EF+++ ++ + LE YA +TMP+G +G+ Sbjct: 240 LRDESMHMNFGIDVINQIKIENPHLWTSEFKEEIIQLIRQGVDLEYQYAKDTMPQGILGM 299 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+ FIANRR QIGL + NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 300 NAEMFEEYLHFIANRRLTQIGLAEQYPGAVNPFPWMSEMMDLKKEKNFFETRVIEYQAGG 359 Query: 121 ELKWD 125 L WD Sbjct: 360 TLSWD 364 >gi|239813962|ref|YP_002942872.1| ribonucleotide-diphosphate reductase subunit beta [Variovorax paradoxus S110] gi|239800539|gb|ACS17606.1| Ribonucleoside-diphosphate reductase [Variovorax paradoxus S110] Length = 391 Score = 170 bits (430), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 76/125 (60%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENP LWT EF+ + + + +A LE YA +TMP+G +G+ Sbjct: 267 LRDESMHCNFGIDLINQLKLENPGLWTPEFKAEIKALFLKAVELEYKYAEDTMPRGVLGM 326 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 327 NASMFKGYLRYIANRRAQQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 386 Query: 121 ELKWD 125 L WD Sbjct: 387 ALSWD 391 >gi|171057074|ref|YP_001789423.1| ribonucleotide-diphosphate reductase subunit beta [Leptothrix cholodnii SP-6] gi|170774519|gb|ACB32658.1| Ribonucleoside-diphosphate reductase [Leptothrix cholodnii SP-6] Length = 402 Score = 169 bits (429), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 77/125 (61%), Positives = 95/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN IK+ENPHLWT F+ + + + +A LE YA +TMP+G +GL Sbjct: 278 LRDESMHCNFGIDLINAIKLENPHLWTPAFKAEIKALFLKAVELEYRYAEDTMPRGVLGL 337 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 338 NASMFKGYLRYIANRRATQIGLEELFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 397 Query: 121 ELKWD 125 L WD Sbjct: 398 ALSWD 402 >gi|319791701|ref|YP_004153341.1| ribonucleoside-diphosphate reductase [Variovorax paradoxus EPS] gi|315594164|gb|ADU35230.1| Ribonucleoside-diphosphate reductase [Variovorax paradoxus EPS] Length = 411 Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 76/125 (60%), Positives = 95/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENP LWT EF+ + + + A LE YA +TMP+G +G+ Sbjct: 287 LRDESMHCNFGIDLINQLKLENPGLWTPEFKAEIKDLFMRAVELEYKYAEDTMPRGVLGM 346 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 347 NASMFKGYLRYIANRRAQQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 406 Query: 121 ELKWD 125 L WD Sbjct: 407 ALSWD 411 >gi|160896947|ref|YP_001562529.1| ribonucleotide-diphosphate reductase subunit beta [Delftia acidovorans SPH-1] gi|160362531|gb|ABX34144.1| Ribonucleoside-diphosphate reductase [Delftia acidovorans SPH-1] Length = 363 Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 76/125 (60%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENP LWT EF+++ + +A LE YA +TMP+G +G+ Sbjct: 239 LRDESMHCNFGIDLINQLKLENPQLWTPEFKEEITALFVKAVELEYRYAEDTMPRGVLGM 298 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 299 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 358 Query: 121 ELKWD 125 L WD Sbjct: 359 ALSWD 363 >gi|160871658|ref|ZP_02061790.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsiella grylli] gi|159120457|gb|EDP45795.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsiella grylli] Length = 362 Score = 167 bits (422), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 77/125 (61%), Positives = 92/125 (73%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+ENPHLWT EF++ ++ E LE YA +T+P+G +GL Sbjct: 237 LRDESMHLNFGIDVINQIKLENPHLWTPEFKRYVINLIKEGVDLEYQYALDTLPRGILGL 296 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA Y++FI NRR QIGL + NP PWMSE+IDLKKEKNFFETRVTEYQ G Sbjct: 297 NANLMWDYLRFIGNRRFTQIGLAEQYPGVSNPLPWMSEIIDLKKEKNFFETRVTEYQTGG 356 Query: 121 ELKWD 125 L WD Sbjct: 357 SLNWD 361 >gi|255019898|ref|ZP_05291973.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Acidithiobacillus caldus ATCC 51756] gi|254970678|gb|EET28165.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Acidithiobacillus caldus ATCC 51756] Length = 374 Score = 167 bits (422), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 74/125 (59%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENP LWT+ FQ++ +++ + LE AYA +TMP+G +GL Sbjct: 250 LRDESMHCNFGIDLINQIKVENPDLWTEPFQEEIVSLIRKGVELECAYADDTMPRGVLGL 309 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y+++I NRR Q+GL + +NPFPWMSE++DLKKEKNFFETRVTEYQ G Sbjct: 310 NAPIFKDYVKYIGNRRLQQLGLPVQWAGIQNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 369 Query: 121 ELKWD 125 L WD Sbjct: 370 ALSWD 374 >gi|171463021|ref|YP_001797134.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192559|gb|ACB43520.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 394 Score = 166 bits (421), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 73/125 (58%), Positives = 95/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENP LW F+ + +++ +A LE YA +TMP+G +GL Sbjct: 270 LRDESMHCNFGIDLINQIKLENPQLWISAFKDEIKSIFEKAVELEYRYAEDTMPRGVLGL 329 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + +++I NRRC QIGL+ +F ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 330 NAPMFKGCLRYICNRRCLQIGLDAMFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 389 Query: 121 ELKWD 125 L W+ Sbjct: 390 ALSWE 394 >gi|319764328|ref|YP_004128265.1| ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans BC] gi|330826374|ref|YP_004389677.1| ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans K601] gi|317118889|gb|ADV01378.1| Ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans BC] gi|329311746|gb|AEB86161.1| Ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans K601] Length = 396 Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 74/125 (59%), Positives = 95/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENP LWT F+ + + + +A LE YA +TMP+G +G+ Sbjct: 272 LRDESMHCNFGIDLINQLKLENPQLWTPAFKDEIKGLFLKAVDLEYRYAEDTMPRGVLGM 331 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGL+ LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 332 NASMFKGYLRYIANRRATQIGLDALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 391 Query: 121 ELKWD 125 L WD Sbjct: 392 ALSWD 396 >gi|268316001|ref|YP_003289720.1| Ribonucleoside-diphosphate reductase [Rhodothermus marinus DSM 4252] gi|262333535|gb|ACY47332.1| Ribonucleoside-diphosphate reductase [Rhodothermus marinus DSM 4252] Length = 347 Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 75/125 (60%), Positives = 99/125 (79%), Gaps = 1/125 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP LWT EFQ++ + ++ EA LE+AYA++ +P+G +GL Sbjct: 223 LRDETIHLNFGIDLINGIKAENPELWTPEFQREVQQLIEEAVELEVAYAYDCLPRGVLGL 282 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 AP +Y+Q+IA+RR +IGL+ + ++NPFPWMSE IDL KEKNFFETRVTEYQQ A Sbjct: 283 TAPMFREYVQYIADRRLERIGLKARYG-SKNPFPWMSETIDLLKEKNFFETRVTEYQQAA 341 Query: 121 ELKWD 125 L WD Sbjct: 342 ALSWD 346 >gi|149927167|ref|ZP_01915424.1| ribonucleotide-diphosphate reductase beta subunit [Limnobacter sp. MED105] gi|149824106|gb|EDM83327.1| ribonucleotide-diphosphate reductase beta subunit [Limnobacter sp. MED105] Length = 399 Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 74/125 (59%), Positives = 94/125 (75%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES H FGID+IN +K+ENPHLWT EF+++ + M +A LE AYA +TMP+G +GL Sbjct: 275 LRDESAHCTFGIDLINTVKLENPHLWTPEFKEEIKAMFRKAVELEHAYAVDTMPRGVLGL 334 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 N+ +YM+FI NRR +QIGL L++ NPFPWMSE++DLKKE NFFE RVTEYQ G Sbjct: 335 NSAQFMEYMKFICNRRSNQIGLGTLYEGATNPFPWMSEMMDLKKETNFFERRVTEYQTGG 394 Query: 121 ELKWD 125 L WD Sbjct: 395 ALSWD 399 >gi|198284354|ref|YP_002220675.1| ribonucleotide-diphosphate reductase subunit beta [Acidithiobacillus ferrooxidans ATCC 53993] gi|198248875|gb|ACH84468.1| Ribonucleoside-diphosphate reductase [Acidithiobacillus ferrooxidans ATCC 53993] Length = 374 Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 73/125 (58%), Positives = 94/125 (75%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+ NQIK+ENP LWT+ FQQ+ ++ LE AYA +TMP+G +GL Sbjct: 250 LRDESMHCNFGIDMANQIKVENPQLWTEAFQQEIIDLIRRGVELECAYADDTMPRGVLGL 309 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP +Y+++I NRR Q+GL + +NPFPWMSE++DLKKEKNFFETRVTEYQ G Sbjct: 310 NAPVFREYVKYIGNRRLVQLGLPQQYPGVQNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 369 Query: 121 ELKWD 125 L W+ Sbjct: 370 ALSWE 374 >gi|218665361|ref|YP_002427016.1| ribonucleoside-diphosphate reductase, beta subunit [Acidithiobacillus ferrooxidans ATCC 23270] gi|218517574|gb|ACK78160.1| ribonucleoside-diphosphate reductase, beta subunit [Acidithiobacillus ferrooxidans ATCC 23270] Length = 380 Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 73/125 (58%), Positives = 94/125 (75%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+ NQIK+ENP LWT+ FQQ+ ++ LE AYA +TMP+G +GL Sbjct: 256 LRDESMHCNFGIDMANQIKVENPQLWTEAFQQEIIDLIRRGVELECAYADDTMPRGVLGL 315 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP +Y+++I NRR Q+GL + +NPFPWMSE++DLKKEKNFFETRVTEYQ G Sbjct: 316 NAPVFREYVKYIGNRRLVQLGLPQQYPGVQNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 375 Query: 121 ELKWD 125 L W+ Sbjct: 376 ALSWE 380 >gi|121608466|ref|YP_996273.1| ribonucleotide-diphosphate reductase subunit beta [Verminephrobacter eiseniae EF01-2] gi|121553106|gb|ABM57255.1| Ribonucleoside-diphosphate reductase [Verminephrobacter eiseniae EF01-2] Length = 399 Score = 163 bits (412), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 75/125 (60%), Positives = 92/125 (73%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENP LWT F+ + + +A LE YA +TMP G +G+ Sbjct: 275 LRDESMHCNFGIDLINQIKLENPLLWTTAFKAEIEALFLQAVELEYRYAEDTMPHGVLGM 334 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF NPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 335 NASMFKGYLRYIANRRATQIGLETLFPQETNPFPWMSEMIDLKKERNFFETRVIEYQSGG 394 Query: 121 ELKWD 125 L WD Sbjct: 395 ALCWD 399 >gi|298243909|ref|ZP_06967716.1| Ribonucleoside-diphosphate reductase [Ktedonobacter racemifer DSM 44963] gi|297556963|gb|EFH90827.1| Ribonucleoside-diphosphate reductase [Ktedonobacter racemifer DSM 44963] Length = 361 Score = 157 bits (398), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 72/125 (57%), Positives = 94/125 (75%), Gaps = 1/125 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP LWT EFQ ++ A LEIAYA++ +P G +GL Sbjct: 238 LRDETIHLNFGIDLINGIKAENPELWTTEFQAHIYDLIKRAVELEIAYAYDCLPNGILGL 297 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA S Y+Q +A+RR +IGL P+F ++ +PFPWMSE +DL KEKNFFETRVTEYQ + Sbjct: 298 NAESFRSYVQHVADRRLERIGLAPIF-HSSHPFPWMSETMDLSKEKNFFETRVTEYQAAS 356 Query: 121 ELKWD 125 L+W+ Sbjct: 357 TLEWE 361 >gi|282890382|ref|ZP_06298910.1| hypothetical protein pah_c016o114 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499764|gb|EFB42055.1| hypothetical protein pah_c016o114 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 350 Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 74/124 (59%), Positives = 92/124 (74%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+IN IK ENP +WT EF+ + M+ EA LEI YA + +P G +GL Sbjct: 228 LRDESIHLNFGIDLINTIKEENPEVWTPEFKDQIIDMVKEAVELEIQYAADCLPNGILGL 287 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA Y+ +IA+RR +IGL+P + T NPFPWMSEV+DL KEKNFFETRVT+YQ GA Sbjct: 288 NAALFRDYVGYIADRRLERIGLKPQYN-TANPFPWMSEVMDLDKEKNFFETRVTQYQSGA 346 Query: 121 ELKW 124 L W Sbjct: 347 ALVW 350 >gi|15834835|ref|NP_296594.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia muridarum Nigg] gi|270285001|ref|ZP_06194395.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia muridarum Nigg] gi|270289024|ref|ZP_06195326.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia muridarum Weiss] gi|301336399|ref|ZP_07224601.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia muridarum MopnTet14] gi|14195147|sp|Q9PL92|RIR2_CHLMU RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit gi|7190253|gb|AAF39087.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydia muridarum Nigg] Length = 346 Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 72/124 (58%), Positives = 92/124 (74%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFG+D+IN IK ENP +WT E QQ+ M+ A LEI YA + +P+G +GL Sbjct: 224 LRDETIHLNFGVDLINGIKEENPEIWTTELQQEIIEMIQRAVDLEIDYARDCLPRGILGL 283 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A Y+Q IA+RR +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRVTEYQ A Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVTEYQHAA 342 Query: 121 ELKW 124 L W Sbjct: 343 SLTW 346 >gi|166154172|ref|YP_001654290.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis 434/Bu] gi|166155047|ref|YP_001653302.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335416|ref|ZP_07223660.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis L2tet1] gi|165930160|emb|CAP03644.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia trachomatis 434/Bu] gi|165931035|emb|CAP06598.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 346 Score = 154 bits (388), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 72/124 (58%), Positives = 92/124 (74%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP +WT E QQ+ ++ A LEI YA + +P+G +GL Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGL 283 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A Y+Q IA+RR +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRVTEYQ A Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVTEYQHAA 342 Query: 121 ELKW 124 L W Sbjct: 343 SLTW 346 >gi|297621807|ref|YP_003709944.1| ribonucleoside-diphosphate reductase beta subunit [Waddlia chondrophila WSU 86-1044] gi|297377108|gb|ADI38938.1| ribonucleoside-diphosphate reductase beta subunit [Waddlia chondrophila WSU 86-1044] Length = 344 Score = 153 bits (387), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 69/125 (55%), Positives = 92/125 (73%), Gaps = 1/125 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP +W ++ + ++ +A LEIAYA E +P G +GL Sbjct: 221 LRDETIHLNFGIDLINGIKAENPEIWNEDLTDEINGLVQQAVELEIAYAKECLPHGVLGL 280 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA +Y+Q++A+RR +IGL ++K + NPFPWMSE +DL KEKNFFETRVTEYQ A Sbjct: 281 NAGLFVEYVQYVADRRLERIGLSAIYK-SSNPFPWMSETMDLTKEKNFFETRVTEYQSAA 339 Query: 121 ELKWD 125 L WD Sbjct: 340 VLSWD 344 >gi|325110864|ref|YP_004271932.1| ribonucleotide reductase [Planctomyces brasiliensis DSM 5305] gi|324971132|gb|ADY61910.1| ribonucleotide reductase [Planctomyces brasiliensis DSM 5305] Length = 353 Score = 153 bits (386), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 72/125 (57%), Positives = 91/125 (72%), Gaps = 1/125 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE+ HLNFGID+IN IK ENP +WT++FQQ+ ++ EA LEI YA + +P+G +GL Sbjct: 230 LRDETTHLNFGIDLINGIKHENPDIWTEKFQQEIIDLVKEAVELEIDYARDCLPRGVLGL 289 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 N Y+Q IA+RR +IGL L+ + NPFPWMSE +DL KEKNFFETRVTEYQ G Sbjct: 290 NGNLFRDYVQHIADRRLERIGLPTLYN-SSNPFPWMSETMDLAKEKNFFETRVTEYQTGG 348 Query: 121 ELKWD 125 L WD Sbjct: 349 TLSWD 353 >gi|283779060|ref|YP_003369815.1| ribonucleoside-diphosphate reductase [Pirellula staleyi DSM 6068] gi|283437513|gb|ADB15955.1| Ribonucleoside-diphosphate reductase [Pirellula staleyi DSM 6068] Length = 357 Score = 153 bits (386), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 70/125 (56%), Positives = 91/125 (72%), Gaps = 1/125 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN ++ ENP +WT +FQ++ ++ EA LE+AYA + +P+G VGL Sbjct: 234 LRDETIHLNFGIDLINGVRAENPGIWTADFQERVIKLVREAVELEVAYAWDCLPRGIVGL 293 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 N Y+Q IA+RR +IGL P + NPFPWMSE +DL KEKNFFETRVTEYQ A Sbjct: 294 NGELFRDYVQHIADRRLERIGL-PTQYGSANPFPWMSETMDLGKEKNFFETRVTEYQSAA 352 Query: 121 ELKWD 125 L WD Sbjct: 353 SLAWD 357 >gi|159899093|ref|YP_001545340.1| ribonucleotide-diphosphate reductase subunit beta [Herpetosiphon aurantiacus ATCC 23779] gi|159892132|gb|ABX05212.1| Ribonucleoside-diphosphate reductase [Herpetosiphon aurantiacus ATCC 23779] Length = 342 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 69/125 (55%), Positives = 92/125 (73%), Gaps = 1/125 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFG+D+IN IK ENP +WT EFQ + ++ ++ LE YA E +P+G +GL Sbjct: 219 LRDETIHLNFGVDLINGIKAENPAIWTNEFQAEIVQLIRQSVELEAQYAAECLPRGVMGL 278 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A Y+Q+IA+RR +IGL + ++NPFPWMSE IDL KEKNFFETRVTEYQ A Sbjct: 279 HAAMFRDYVQYIADRRLQRIGLAIQYG-SQNPFPWMSETIDLTKEKNFFETRVTEYQSAA 337 Query: 121 ELKWD 125 L+WD Sbjct: 338 SLEWD 342 >gi|112489977|pdb|2ANI|A Chain A, Crystal Structure Of The F127y Mutant Of Ribonucleotide Reductase R2 From Chlamydia Trachomatis Length = 346 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 71/124 (57%), Positives = 91/124 (73%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP +WT E QQ+ ++ A LEI YA + +P+G +GL Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGL 283 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A Y+Q IA+RR +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRV EYQ A Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVIEYQHAA 342 Query: 121 ELKW 124 L W Sbjct: 343 SLTW 346 >gi|15605563|ref|NP_220349.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis D/UW-3/CX] gi|255311668|ref|ZP_05354238.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis 6276] gi|255317969|ref|ZP_05359215.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis 6276s] gi|14195107|sp|O84835|RIR2_CHLTR RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit gi|51247460|pdb|1SYY|A Chain A, Crystal Structure Of The R2 Subunit Of Ribonucleotide Reductase From Chlamydia Trachomatis gi|3329298|gb|AAC68425.1| Ribonucleoside Reductase, Small Chain [Chlamydia trachomatis D/UW-3/CX] gi|296436383|gb|ADH18557.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis G/9768] gi|296437314|gb|ADH19484.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis G/11222] gi|296438242|gb|ADH20403.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis G/11074] gi|297140743|gb|ADH97501.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis G/9301] gi|297748957|gb|ADI51503.1| Ribonucleoside-diphosphate reductase beta chain [Chlamydia trachomatis D-EC] gi|297749837|gb|ADI52515.1| Ribonucleoside-diphosphate reductase beta chain [Chlamydia trachomatis D-LC] Length = 346 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 71/124 (57%), Positives = 91/124 (73%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP +WT E QQ+ ++ A LEI YA + +P+G +GL Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGL 283 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A Y+Q IA+RR +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRV EYQ A Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVIEYQHAA 342 Query: 121 ELKW 124 L W Sbjct: 343 SLTW 346 >gi|76789573|ref|YP_328659.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis A/HAR-13] gi|237803260|ref|YP_002888454.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis B/Jali20/OT] gi|237805181|ref|YP_002889335.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis B/TZ1A828/OT] gi|255349232|ref|ZP_05381239.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis 70] gi|255503769|ref|ZP_05382159.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis 70s] gi|255507450|ref|ZP_05383089.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis D(s)2923] gi|76168103|gb|AAX51111.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia trachomatis A/HAR-13] gi|231273481|emb|CAX10397.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia trachomatis B/TZ1A828/OT] gi|231274494|emb|CAX11290.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia trachomatis B/Jali20/OT] gi|289525874|emb|CBJ15356.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia trachomatis Sweden2] gi|296435459|gb|ADH17637.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis E/150] gi|296439176|gb|ADH21329.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis E/11023] Length = 346 Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 71/124 (57%), Positives = 91/124 (73%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP +WT E QQ+ ++ A LEI YA + +P+G +GL Sbjct: 224 LRDETIHLNFGIDLINGIKEENPGIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGL 283 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A Y+Q IA+RR +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRV EYQ A Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVIEYQHAA 342 Query: 121 ELKW 124 L W Sbjct: 343 SLTW 346 >gi|189219089|ref|YP_001939730.1| ribonucleotide-diphosphate reductase subunit beta [Methylacidiphilum infernorum V4] gi|189185947|gb|ACD83132.1| Ribonucleotide reductase, beta subunit [Methylacidiphilum infernorum V4] Length = 361 Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 68/124 (54%), Positives = 94/124 (75%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN I+ ENP +WT FQ++ M+ E+ LE AYA + +P+G +GL Sbjct: 239 LRDETIHLNFGIDLINGIREENPEIWTAGFQKEIEEMIDESVRLEYAYARDCLPRGILGL 298 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 N+ + Y+++IA+RR +IG + + ++NPFPWMSEV+DL KEKNFFETRVTEYQ GA Sbjct: 299 NSALFKDYVEYIADRRLERIGFKAKYG-SKNPFPWMSEVMDLVKEKNFFETRVTEYQSGA 357 Query: 121 ELKW 124 L W Sbjct: 358 VLNW 361 >gi|330443801|ref|YP_004376787.1| ribonucleoside-diphosphate reductase subunit beta [Chlamydophila pecorum E58] gi|328806911|gb|AEB41084.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila pecorum E58] Length = 346 Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 68/124 (54%), Positives = 92/124 (74%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP +W+KE Q++ ++ A LEI YA + +PKG +GL Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEVWSKELQEEIIALIETAVGLEIDYAKDCLPKGILGL 283 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + Y++ IA+RR +IGL+P++ ++NPFPWMSE +DL KEKNFFETRVTEYQ A Sbjct: 284 KSSMFIDYVRHIADRRLERIGLKPIYN-SKNPFPWMSETMDLNKEKNFFETRVTEYQTAA 342 Query: 121 ELKW 124 L W Sbjct: 343 SLSW 346 >gi|29840533|ref|NP_829639.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila caviae GPIC] gi|29834882|gb|AAP05517.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila caviae GPIC] Length = 346 Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 67/124 (54%), Positives = 92/124 (74%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP +W++E Q + ++ +A LEI YA + +P+G +GL Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEVWSQELQDEIIALIQKAVDLEIEYAKDCLPRGILGL 283 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + Y++ IA+RR +IGL+P++ Y++NPFPWMSE IDL KEKNFFETRVTEYQ Sbjct: 284 KSSMFIDYVRHIADRRLERIGLKPIY-YSKNPFPWMSETIDLNKEKNFFETRVTEYQTSG 342 Query: 121 ELKW 124 L W Sbjct: 343 NLSW 346 >gi|62185356|ref|YP_220141.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila abortus S26/3] gi|62148423|emb|CAH64191.1| putative ibonucleoside reductase small subunit [Chlamydophila abortus S26/3] Length = 349 Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 68/124 (54%), Positives = 91/124 (73%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP +WT E Q + ++ +A LEI YA + +P+G +GL Sbjct: 227 LRDETIHLNFGIDLINGIKEENPEVWTPELQSEIIALIEKAVDLEIEYARDCLPRGILGL 286 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A Y++ IA+RR +IGL+P++ +++NPFPWMSE IDL KEKNFFETRV EYQ A Sbjct: 287 KASMFIDYVRHIADRRLERIGLKPIY-HSKNPFPWMSETIDLNKEKNFFETRVIEYQTAA 345 Query: 121 ELKW 124 L W Sbjct: 346 NLSW 349 >gi|313848275|emb|CBY17276.1| putative ibonucleoside reductase small subunit [Chlamydophila psittaci RD1] Length = 349 Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 68/124 (54%), Positives = 91/124 (73%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP +WT E Q + ++ +A LEI YA + +P+G +GL Sbjct: 227 LRDETIHLNFGIDLINGIKEENPEVWTPELQSEIIALIEKAVDLEIEYARDCLPRGILGL 286 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A Y++ IA+RR +IGL+P++ +++NPFPWMSE IDL KEKNFFETRV EYQ A Sbjct: 287 KASMFIDYVRHIADRRLERIGLKPIY-HSKNPFPWMSETIDLNKEKNFFETRVIEYQTAA 345 Query: 121 ELKW 124 L W Sbjct: 346 NLSW 349 >gi|329943118|ref|ZP_08291892.1| ribonucleotide reductase, small chain family protein [Chlamydophila psittaci Cal10] gi|332287701|ref|YP_004422602.1| ribonucleotide reductase subunit beta [Chlamydophila psittaci 6BC] gi|325507260|gb|ADZ18898.1| ribonucleotide reductase subunit beta [Chlamydophila psittaci 6BC] gi|328814665|gb|EGF84655.1| ribonucleotide reductase, small chain family protein [Chlamydophila psittaci Cal10] gi|328914953|gb|AEB55786.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila psittaci 6BC] Length = 346 Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 68/124 (54%), Positives = 91/124 (73%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP +WT E Q + ++ +A LEI YA + +P+G +GL Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEVWTPELQSEIIALIEKAVDLEIEYARDCLPRGILGL 283 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A Y++ IA+RR +IGL+P++ +++NPFPWMSE IDL KEKNFFETRV EYQ A Sbjct: 284 KASMFIDYVRHIADRRLERIGLKPIY-HSKNPFPWMSETIDLNKEKNFFETRVIEYQTAA 342 Query: 121 ELKW 124 L W Sbjct: 343 NLSW 346 >gi|330941350|gb|EGH44202.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. pisi str. 1704B] Length = 109 Score = 147 bits (370), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 66/109 (60%), Positives = 82/109 (75%) Query: 17 QIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRR 76 QIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+NA E Y++FIANRR Sbjct: 1 QIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRR 60 Query: 77 CHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAELKWD 125 QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G L WD Sbjct: 61 LSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGGALSWD 109 >gi|89898045|ref|YP_515155.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila felis Fe/C-56] gi|89331417|dbj|BAE81010.1| ribonucleoside-diphosphate reductase beta chain [Chlamydophila felis Fe/C-56] Length = 349 Score = 147 bits (370), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 66/124 (53%), Positives = 92/124 (74%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP +W+++ Q + ++ +A LEI YA + +P+G +GL Sbjct: 227 LRDETIHLNFGIDLINGIKEENPEVWSQQLQDEIVDLIQKAVDLEIEYARDCLPRGILGL 286 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + Y++ IA+RR +IGL+P++ ++NPFPWMSE IDL KEKNFFETRVTEYQ A Sbjct: 287 RSSMFIDYVRHIADRRLERIGLKPIYN-SKNPFPWMSETIDLNKEKNFFETRVTEYQTAA 345 Query: 121 ELKW 124 L W Sbjct: 346 NLNW 349 >gi|33242353|ref|NP_877294.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila pneumoniae TW-183] gi|33236864|gb|AAP98951.1| ribonucleoside reductase small chain [Chlamydophila pneumoniae TW-183] Length = 365 Score = 147 bits (370), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 66/124 (53%), Positives = 91/124 (73%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP +WT E Q++ ++ +A LEI YA + +P+G +GL Sbjct: 243 LRDETIHLNFGIDLINGIKEENPEVWTTELQEEIVALIEKAVELEIEYAKDCLPRGILGL 302 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + Y++ IA+RR +IGL+P++ ++ NPFPWMSE +DL KEKNFFETRVTEYQ Sbjct: 303 RSSMFIDYVRHIADRRLERIGLKPIY-HSRNPFPWMSETMDLNKEKNFFETRVTEYQTAG 361 Query: 121 ELKW 124 L W Sbjct: 362 NLSW 365 >gi|15618893|ref|NP_225179.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila pneumoniae CWL029] gi|15836516|ref|NP_301040.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila pneumoniae J138] gi|16752043|ref|NP_445409.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila pneumoniae AR39] gi|14195165|sp|Q9Z6S4|RIR2_CHLPN RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit gi|4377313|gb|AAD19122.1| Ribonucleoside Reductase, Small Chain [Chlamydophila pneumoniae CWL029] gi|7189783|gb|AAF38660.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila pneumoniae AR39] gi|8979358|dbj|BAA99192.1| ribonucleoside reductase, small chain [Chlamydophila pneumoniae J138] gi|269302786|gb|ACZ32886.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila pneumoniae LPCoLN] Length = 346 Score = 146 bits (369), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 66/124 (53%), Positives = 91/124 (73%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP +WT E Q++ ++ +A LEI YA + +P+G +GL Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEVWTTELQEEIVALIEKAVELEIEYAKDCLPRGILGL 283 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + Y++ IA+RR +IGL+P++ ++ NPFPWMSE +DL KEKNFFETRVTEYQ Sbjct: 284 RSSMFIDYVRHIADRRLERIGLKPIY-HSRNPFPWMSETMDLNKEKNFFETRVTEYQTAG 342 Query: 121 ELKW 124 L W Sbjct: 343 NLSW 346 >gi|149173739|ref|ZP_01852368.1| ribonucleotide-diphosphate reductase beta subunit [Planctomyces maris DSM 8797] gi|148847269|gb|EDL61603.1| ribonucleotide-diphosphate reductase beta subunit [Planctomyces maris DSM 8797] Length = 359 Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 72/125 (57%), Positives = 86/125 (68%), Gaps = 1/125 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP LWT EFQQ + A LEI YA + +P G +GL Sbjct: 236 LRDETIHLNFGIDLINGIKQENPDLWTPEFQQLIIDRMKYAAELEIEYAKDCLPTGILGL 295 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 N +Y+Q IA+RR +IGL P + NPFPWMSE +DL KEKNFFETRVTEYQ Sbjct: 296 NGELFREYVQHIADRRLERIGL-PAQYGSANPFPWMSETMDLSKEKNFFETRVTEYQSSG 354 Query: 121 ELKWD 125 L WD Sbjct: 355 SLNWD 359 >gi|269839640|ref|YP_003324332.1| ribonucleoside-diphosphate reductase [Thermobaculum terrenum ATCC BAA-798] gi|269791370|gb|ACZ43510.1| Ribonucleoside-diphosphate reductase [Thermobaculum terrenum ATCC BAA-798] Length = 353 Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 70/125 (56%), Positives = 89/125 (71%), Gaps = 1/125 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP WT+E ++ M+ +A EIAYA E +P G +GL Sbjct: 230 LRDETVHLNFGIDLINTIKEENPEAWTEELRRDLVGMIRQAVEYEIAYARECLPNGVLGL 289 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA +Y+Q+IA+RR +I L P+ + NPFPWMSE +DL KEKNFFETRVTEYQ Sbjct: 290 NADLFREYVQYIADRRLERIEL-PVQYRSRNPFPWMSETMDLPKEKNFFETRVTEYQNAG 348 Query: 121 ELKWD 125 L WD Sbjct: 349 TLVWD 353 >gi|300709535|ref|YP_003735349.1| ribonucleotide-diphosphate reductase subunit beta [Halalkalicoccus jeotgali B3] gi|299123218|gb|ADJ13557.1| ribonucleotide-diphosphate reductase subunit beta [Halalkalicoccus jeotgali B3] Length = 330 Score = 140 bits (354), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 62/124 (50%), Positives = 87/124 (70%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDESLHLNFG+D+IN ++ EN +WT F+ + +L EA LE YA E P+ +G+ Sbjct: 208 MRDESLHLNFGVDLINTVREENSGIWTDVFEAEIEGLLREAVELERTYAREACPEEVLGM 267 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +Y++++A+RR Q+G+EP++ T+NPFPWM+E +DL KEKNFFET V EYQ G Sbjct: 268 GPAQFAEYVEYVADRRLDQLGMEPVYD-TDNPFPWMAEQVDLNKEKNFFETNVAEYQSGG 326 Query: 121 ELKW 124 L+W Sbjct: 327 SLEW 330 >gi|313117005|ref|YP_004038129.1| ribonucleotide reductase, beta subunit [Halogeometricum borinquense DSM 11551] gi|312294957|gb|ADQ68993.1| ribonucleotide reductase, beta subunit [Halogeometricum borinquense DSM 11551] Length = 330 Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 63/124 (50%), Positives = 85/124 (68%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDESLH+ FG+D+INQI+ ENP WT EF + R ++ +A LE YA E P +G+ Sbjct: 208 MRDESLHVGFGVDLINQIRAENPDAWTDEFGAEVRDLIEKAVDLEQIYAREACPDDVLGM 267 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + +Y++ +A+RR Q+ L+ + T+NPFPWMSE +DL KEKNFFET+VTEYQ G Sbjct: 268 SPDQFAEYVEHVADRRLGQLDLDASYG-TDNPFPWMSEAVDLNKEKNFFETQVTEYQSGG 326 Query: 121 ELKW 124 L W Sbjct: 327 SLDW 330 >gi|257053403|ref|YP_003131236.1| ribonucleotide-diphosphate reductase subunit beta [Halorhabdus utahensis DSM 12940] gi|256692166|gb|ACV12503.1| Ribonucleoside-diphosphate reductase [Halorhabdus utahensis DSM 12940] Length = 330 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 64/124 (51%), Positives = 86/124 (69%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDESLH+ FG+D+I+QI+ ENP +WT EF + ++ EA LE YA E P+ +G+ Sbjct: 208 MRDESLHVGFGVDLIDQIRTENPGVWTDEFDSEVIDLIKEAVELEQIYAREACPEEILGM 267 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + Y+++IA+RR Q+ L + TENPFPWMSE +DL KEKNFFET+VTEYQ G Sbjct: 268 SGSQFADYVEYIADRRLDQLDLPEQYG-TENPFPWMSEQVDLNKEKNFFETQVTEYQSGG 326 Query: 121 ELKW 124 L+W Sbjct: 327 SLEW 330 >gi|15791173|ref|NP_280997.1| ribonucleotide-diphosphate reductase subunit beta [Halobacterium sp. NRC-1] gi|169236929|ref|YP_001690129.1| ribonucleotide-diphosphate reductase subunit beta [Halobacterium salinarum R1] gi|10581791|gb|AAG20477.1| ribonucleoside reductase small chain [Halobacterium sp. NRC-1] gi|167727995|emb|CAP14783.1| ribonucleoside-diphosphate reductase beta subunit [Halobacterium salinarum R1] Length = 331 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 58/125 (46%), Positives = 89/125 (71%), Gaps = 1/125 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDESLHLNFG+D+INQI+ E+P +WT +F+ + +++ +A LE YA + P +G+ Sbjct: 208 MRDESLHLNFGVDLINQIRDEHPDVWTADFEAEVNSLMRDAVDLEQLYARDACPDDLLGM 267 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 ++ Y++++A+RR Q+ ++P++ T+NPFPWM+E +DL E NFFE V+EYQQG Sbjct: 268 SSEQFADYVEYVADRRFQQLRMDPVYG-TDNPFPWMTEQVDLNTETNFFERNVSEYQQGG 326 Query: 121 ELKWD 125 L WD Sbjct: 327 SLDWD 331 >gi|289582310|ref|YP_003480776.1| ribonucleoside-diphosphate reductase [Natrialba magadii ATCC 43099] gi|289531863|gb|ADD06214.1| Ribonucleoside-diphosphate reductase [Natrialba magadii ATCC 43099] Length = 330 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 63/124 (50%), Positives = 86/124 (69%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDESLH+ FG+D+I+QI++ENP +WT F + ++ EA LE YA+E P +G+ Sbjct: 208 MRDESLHVGFGVDLIDQIRMENPDVWTDAFGDEVVELITEAVELEKIYAYEACPDEILGM 267 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A +Y++ IA+RR Q+ L P T+NPFPW+SE +DL KEKNFFET+VTEYQ G Sbjct: 268 SADQFAEYVEHIADRRLGQLDL-PTQYGTDNPFPWLSEQVDLNKEKNFFETQVTEYQSGG 326 Query: 121 ELKW 124 L W Sbjct: 327 SLDW 330 >gi|322368525|ref|ZP_08043093.1| ribonucleotide-diphosphate reductase subunit beta [Haladaptatus paucihalophilus DX253] gi|320551809|gb|EFW93455.1| ribonucleotide-diphosphate reductase subunit beta [Haladaptatus paucihalophilus DX253] Length = 330 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 62/124 (50%), Positives = 85/124 (68%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH+ FG+D+IN+I+ ENP+ WT F + ++ A LE YA+E P +G+ Sbjct: 208 LRDESLHVGFGVDLINEIRAENPNAWTDAFGDEVTDLITNAVELEKIYAYEACPDEILGM 267 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A +Y++ IA+RR Q+ L+ + TENPFPWMSE +DL KEKNFFET+VTEYQ G Sbjct: 268 SAAQFAEYVEHIADRRLAQLDLDEQYG-TENPFPWMSEQVDLNKEKNFFETQVTEYQSGG 326 Query: 121 ELKW 124 L W Sbjct: 327 SLDW 330 >gi|291336894|gb|ADD96423.1| hypothetical protein [uncultured organism MedDCM-OCT-S09-C426] Length = 147 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 58/125 (46%), Positives = 83/125 (66%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH+NFG +IN +K + P +WTK+F++++ + +A LEI YAH+ +P+G +GL Sbjct: 22 LRDESLHINFGTYLINTLKEQYPTIWTKKFEEETIEHIKKAVQLEINYAHDVLPRGILGL 81 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA YM +I NRR IGL+ F+ NPFPW+SEV+D NFFE +V +YQ Sbjct: 82 NADMFVDYMHYIGNRRLEGIGLDYRFESDTNPFPWLSEVVDTGAMTNFFERKVKDYQNSG 141 Query: 121 ELKWD 125 L+ D Sbjct: 142 VLEDD 146 >gi|118500933|gb|ABK97635.1| ribonucleoside diphosphate reductase beta subunit [Allochromatium vinosum DSM 180] Length = 280 Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 54/81 (66%), Positives = 65/81 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIKIENPHLWT +F+Q+ M+ EA LE YAH+TMP+G +GL Sbjct: 200 LRDESMHMNFGIDVINQIKIENPHLWTPDFRQELVGMIREAVELEARYAHDTMPRGVLGL 259 Query: 61 NAPSCEQYMQFIANRRCHQIG 81 NA E Y+ FIANRRC QIG Sbjct: 260 NAQMFEDYLHFIANRRCAQIG 280 >gi|284043177|ref|YP_003393517.1| ribonucleoside-diphosphate reductase [Conexibacter woesei DSM 14684] gi|283947398|gb|ADB50142.1| Ribonucleoside-diphosphate reductase [Conexibacter woesei DSM 14684] Length = 364 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 54/122 (44%), Positives = 81/122 (66%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES H+ ++ ++ ENP +WT EF+ + R ++ EA LE + + +P VGL Sbjct: 235 LRDESNHIELFRRLLRELVAENPEIWTAEFRDELRELMREAVALEQRFIDDCLPVEGVGL 294 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA QY+ +IA+RR +GLEPL ENP PW++E++D++KE+NFFE RVTEYQ+ + Sbjct: 295 NADEFAQYIDYIADRRLEGVGLEPLKPGVENPLPWLAELMDVRKEQNFFEGRVTEYQKAS 354 Query: 121 EL 122 L Sbjct: 355 AL 356 >gi|153875510|ref|ZP_02003277.1| ribonucleotide-diphosphate reductase beta subunit [Beggiatoa sp. PS] gi|152068026|gb|EDN66723.1| ribonucleotide-diphosphate reductase beta subunit [Beggiatoa sp. PS] Length = 374 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 57/125 (45%), Positives = 81/125 (64%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVGL 60 RDE+LH + G+ +I QI EN LW Q++SR ++ EA LE YAH +MP+ G VGL Sbjct: 251 RDENLHSSNGLWLIKQIIQENHELWDSTMQERSRAIVSEAVKLETDYAHASMPEGGIVGL 310 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + ++ F+A+ C +G++PLF+ E+P PW+SE +L E NFFE RV EYQ G+ Sbjct: 311 PVKTYIKFSHFVADNICKNLGIKPLFRVREHPMPWISEY-ELNHEVNFFEGRVREYQTGS 369 Query: 121 ELKWD 125 +L WD Sbjct: 370 QLTWD 374 >gi|294055010|ref|YP_003548668.1| Ribonucleoside-diphosphate reductase [Coraliomargarita akajimensis DSM 45221] gi|293614343|gb|ADE54498.1| Ribonucleoside-diphosphate reductase [Coraliomargarita akajimensis DSM 45221] Length = 360 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 53/122 (43%), Positives = 81/122 (66%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES H+ ++I + EN +WT EF+++ R ++ EA LE + + +P VGL Sbjct: 231 LRDESNHIEVFRNLIMDLIEENEDVWTPEFREELRDLMREAVTLEKDFIRDCLPVNSVGL 290 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A QY+ +IA+RR +GL PL +NPFPW++E++D+KKE+NFFE RVTEYQ+ + Sbjct: 291 SADEFCQYIDYIADRRLEGVGLAPLSPGVDNPFPWLAEMMDIKKEQNFFEGRVTEYQKAS 350 Query: 121 EL 122 L Sbjct: 351 AL 352 >gi|254442775|ref|ZP_05056251.1| ribonucleoside-diphosphate reductase, beta subunit [Verrucomicrobiae bacterium DG1235] gi|198257083|gb|EDY81391.1| ribonucleoside-diphosphate reductase, beta subunit [Verrucomicrobiae bacterium DG1235] Length = 361 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 50/123 (40%), Positives = 76/123 (61%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES H+ ++ + ENP +WT EF+ + R + EA LE + + +P +GL Sbjct: 232 LRDESNHIELLRNLFMDLIEENPDVWTPEFKAELRDAMSEAIALEKEFIADCLPVDSIGL 291 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY+ +IA+RR GL+PL NP PW++E++D+KKE+NFFE RVTEYQ+ + Sbjct: 292 RKEDFVQYIDYIADRRLEGCGLDPLTPGVTNPLPWLAEMMDIKKEQNFFEGRVTEYQKAS 351 Query: 121 ELK 123 L+ Sbjct: 352 SLE 354 >gi|88856487|ref|ZP_01131145.1| ribonucleotide-diphosphate reductase beta subunit [marine actinobacterium PHSC20C1] gi|88814354|gb|EAR24218.1| ribonucleotide-diphosphate reductase beta subunit [marine actinobacterium PHSC20C1] Length = 332 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 52/120 (43%), Positives = 77/120 (64%), Gaps = 1/120 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLHL FGI++I + ENP + T+EF + R M+ +A +E AY H+ +P G +GL Sbjct: 205 VRDESLHLKFGINLILTVLEENPEIQTEEFADEIRQMILDAVEMEEAYNHDLLPGGILGL 264 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA QY++++A+RR ++G EP +K T NP WM+ D + NFFE+ T Y+ A Sbjct: 265 NANYINQYVKYLADRRLEELGFEPHYKVT-NPAKWMATANDTLELVNFFESTNTSYEANA 323 >gi|196233679|ref|ZP_03132520.1| Ribonucleoside-diphosphate reductase [Chthoniobacter flavus Ellin428] gi|196222349|gb|EDY16878.1| Ribonucleoside-diphosphate reductase [Chthoniobacter flavus Ellin428] Length = 390 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 50/123 (40%), Positives = 71/123 (57%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES H+ G ++ Q+ ENP +WT EF+ + + E LE + + +P+ VG+ Sbjct: 260 LRDESNHIELGRYILTQLIAENPDIWTPEFRAELVEFMREGVELEKEFVRDCLPEDGVGM 319 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 Y+++ A+RR + L L NPF W+ EVI L+KEKNFFETRVTEYQ Sbjct: 320 TQADFLTYVEYNADRRLAGLDLPALSGVKTNPFAWLDEVIFLRKEKNFFETRVTEYQTSG 379 Query: 121 ELK 123 LK Sbjct: 380 SLK 382 >gi|241589542|ref|YP_002979567.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D] gi|240868254|gb|ACS65913.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D] Length = 328 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 45/77 (58%), Positives = 58/77 (75%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL Sbjct: 233 LRDESLHCNFGIDLINQIKLENPHLWTAEFKVEITELFKQAVDLEYRYAEDTMPRGVLGL 292 Query: 61 NAPSCEQYMQFIANRRC 77 NA + Y++FI NRRC Sbjct: 293 NASMFKGYLRFICNRRC 309 >gi|171913278|ref|ZP_02928748.1| ribonucleotide-diphosphate reductase subunit beta [Verrucomicrobium spinosum DSM 4136] Length = 361 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 48/122 (39%), Positives = 74/122 (60%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES H+ ++ + ENP +WT EF+++ ++ EA LE + + +P VGL Sbjct: 232 LRDESNHIKVFRNLFMDLIDENPEIWTPEFREELVELMKEAVALEKEFIRDCLPVAAVGL 291 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A E Y+ FIA+RR +GL L NP PW++E+ D++KE+NFFE VT+YQ+ + Sbjct: 292 TAGEFELYIDFIADRRLASVGLPALTPGIVNPLPWLAEMQDIRKEQNFFEGTVTDYQKAS 351 Query: 121 EL 122 L Sbjct: 352 SL 353 >gi|225164890|ref|ZP_03727109.1| Ribonucleoside-diphosphate reductase [Opitutaceae bacterium TAV2] gi|224800504|gb|EEG18881.1| Ribonucleoside-diphosphate reductase [Opitutaceae bacterium TAV2] Length = 362 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 48/123 (39%), Positives = 76/123 (61%), Gaps = 1/123 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES H+ +++ + ENP +WT F+++ R + EA LE + + +P VGL Sbjct: 232 LRDESNHIEVFRNLLMDLVEENPEIWTPGFKEELRETMREAVTLEKEFIRDCLPVNAVGL 291 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 Y+ +IA+RR +GL P+ +NP PW++E++D+KKE+NFFE RVTEYQ+ Sbjct: 292 AVDEFLTYIDYIADRRLEGVGLAPISATPIKNPLPWLAEMMDIKKEQNFFEGRVTEYQKA 351 Query: 120 AEL 122 + L Sbjct: 352 SSL 354 >gi|117928932|ref|YP_873483.1| ribonucleoside-diphosphate reductase [Acidothermus cellulolyticus 11B] gi|117649395|gb|ABK53497.1| Ribonucleoside-diphosphate reductase [Acidothermus cellulolyticus 11B] Length = 348 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 49/126 (38%), Positives = 79/126 (62%), Gaps = 4/126 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES+H+ F DVI+ ++ E P L+ E +++R ML EA E +A + + +G G++ Sbjct: 222 RDESMHMAFAFDVIDTVRREEPELFDDELARQAREMLAEAVDCETQFAEDLLGQGVPGMS 281 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119 Y++ +A+RRC Q+GLEP++ + NPF +M E+ D+++ NFFE RV YQ G Sbjct: 282 LADMRSYLEHVADRRCVQLGLEPIYG-SPNPFTFM-ELQDVQELSNFFERRVAAYQIGVS 339 Query: 120 AELKWD 125 E+ +D Sbjct: 340 GEVAFD 345 >gi|330467634|ref|YP_004405377.1| ribonucleoside-diphosphate reductase [Verrucosispora maris AB-18-032] gi|328810605|gb|AEB44777.1| Ribonucleoside-diphosphate reductase [Verrucosispora maris AB-18-032] Length = 342 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 46/118 (38%), Positives = 74/118 (62%), Gaps = 2/118 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES+H+ F DV++ ++ E P L+ E +Q+ R ML EA E+ +A + + +G G+ Sbjct: 216 RDESMHMAFAFDVVDTVRAEEPDLFDAEMEQQVRDMLAEAVDCEVQFAADLLEQGVSGMP 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 QY+Q +A+RR +G+ P++ T NPF +M E+ D+++ NFFE RV+ YQ G Sbjct: 276 LADMRQYLQHVADRRLAMLGIAPMYGST-NPFAFM-ELQDVQELSNFFERRVSAYQVG 331 >gi|149375674|ref|ZP_01893443.1| Ribonucleotide reductase, beta subunit [Marinobacter algicola DG893] gi|149360076|gb|EDM48531.1| Ribonucleotide reductase, beta subunit [Marinobacter algicola DG893] Length = 352 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 54/125 (43%), Positives = 75/125 (60%), Gaps = 5/125 (4%) Query: 1 MRDESLHLNFGIDVINQI-KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59 +RDE++H +FG+ V+NQI + EN L K R M E+ E AYA+ + +G Sbjct: 232 LRDEAMHFSFGLKVVNQILEEENITLDPKAV----RDMWDESEAAETAYANYILRDPILG 287 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +A + +F+ANRR +GLE F +N PW+ E L+KEKNFFETRV EYQ G Sbjct: 288 YSAQYHSEQFRFVANRRARTVGLEEPFPGAKNVSPWLDEQATLRKEKNFFETRVIEYQTG 347 Query: 120 AELKW 124 A+L+W Sbjct: 348 AQLEW 352 >gi|238061574|ref|ZP_04606283.1| ribonucleoside-diphosphate reductase [Micromonospora sp. ATCC 39149] gi|237883385|gb|EEP72213.1| ribonucleoside-diphosphate reductase [Micromonospora sp. ATCC 39149] Length = 344 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 47/119 (39%), Positives = 74/119 (62%), Gaps = 2/119 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES+H+ F DV++ ++ E P L+ E ++ R ML EA E +A + + +G GL+ Sbjct: 218 RDESMHMAFAFDVVDTVRHEEPDLFDDELARQVREMLAEAVECEAQFAEDLLEQGVSGLS 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY+Q +A+RR Q+G+ PL+ + NPF +M E+ D+++ NFFE RV+ YQ G Sbjct: 278 LDDMRQYLQHVADRRLAQLGIAPLYG-SANPFAFM-ELQDVQELSNFFERRVSAYQVGV 334 >gi|120556760|ref|YP_961111.1| ribonucleoside-diphosphate reductase [Marinobacter aquaeolei VT8] gi|120326609|gb|ABM20924.1| Ribonucleoside-diphosphate reductase [Marinobacter aquaeolei VT8] Length = 352 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 3/124 (2%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H +FG+ V+NQI E + R M E+ E+AYA+ + +G Sbjct: 232 LRDEAMHFSFGLKVVNQILEEEKITLDP---KAVREMWDESEAAEMAYANYVLRDPILGY 288 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A + +F+ANRR +GLE F +N PW+ E L+KEKNFFETRV EYQ GA Sbjct: 289 SAEYHSEQFRFVANRRARTVGLEEPFPGAKNVSPWLDEQATLRKEKNFFETRVIEYQTGA 348 Query: 121 ELKW 124 +L+W Sbjct: 349 QLEW 352 >gi|311696539|gb|ADP99412.1| ribonucleotide-diphosphate reductase beta subunit [marine bacterium HP15] Length = 352 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 53/125 (42%), Positives = 76/125 (60%), Gaps = 5/125 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKS-RTMLHEATLLEIAYAHETMPKGFVG 59 +RDE++H +FG+ V+NQI +E ++ F K+ R M E+ E AYA + +G Sbjct: 232 LRDEAMHFSFGLKVVNQI-VEEENI---TFDPKAVREMWDESEAAEKAYADYILRDPILG 287 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +A + +F+ANRR +GLE F +N PW+ E L+KEKNFFETRV EYQ G Sbjct: 288 YSAEYHSEQFRFVANRRARTVGLEEPFPGAKNVSPWLDEQATLRKEKNFFETRVIEYQTG 347 Query: 120 AELKW 124 A+L+W Sbjct: 348 AQLEW 352 >gi|94986920|ref|YP_594853.1| ribonucleotide reductase, beta subunit [Lawsonia intracellularis PHE/MN1-00] gi|94731169|emb|CAJ54531.1| Ribonucleotide reductase, beta subunit [Lawsonia intracellularis PHE/MN1-00] Length = 333 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 57/126 (45%), Positives = 73/126 (57%), Gaps = 5/126 (3%) Query: 1 MRDESLHLNFGIDVINQ-IKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59 +RDE LH FGI VI I+ EN L +Q + E EIAYA+ + + +G Sbjct: 212 LRDEVLHCTFGITVIKGLIEEENITLDPTAVRQ----LWDEVEAAEIAYANYILHEPIIG 267 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 NA +FIANRR Q+G++ F +N PW+ E +L+KEKNFFETRVTEYQ G Sbjct: 268 YNADLHIGQFRFIANRRSRQLGMKEPFPGAKNVLPWLDEQSNLRKEKNFFETRVTEYQTG 327 Query: 120 AELKWD 125 LKWD Sbjct: 328 GGLKWD 333 >gi|148273612|ref|YP_001223173.1| ribonucleotide-diphosphate reductase subunit beta [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|170782700|ref|YP_001711034.1| ribonucleotide-diphosphate reductase subunit beta [Clavibacter michiganensis subsp. sepedonicus] gi|147831542|emb|CAN02508.1| putative ribonucleoside-diphosphate reductase beta subunit [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|169157270|emb|CAQ02455.1| ribonucleoside-diphosphate reductase beta subunit [Clavibacter michiganensis subsp. sepedonicus] Length = 331 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 48/120 (40%), Positives = 74/120 (61%), Gaps = 1/120 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLHL FGI++I + ENP L T+EF + + M+ +A +E Y + +P G +GL Sbjct: 206 VRDESLHLKFGINLILTVLEENPDLQTEEFAAEIKQMILDAVEMEEQYNRDLLPNGILGL 265 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA QY++++A+RR ++G E +K + NP WM+ D + NFFE+ T Y+ A Sbjct: 266 NANYINQYVKYLADRRLEELGFEAEYKVS-NPAKWMATANDTLQLVNFFESTNTSYESNA 324 >gi|311743885|ref|ZP_07717691.1| ribonucleotide-diphosphate reductase beta subunit [Aeromicrobium marinum DSM 15272] gi|311313015|gb|EFQ82926.1| ribonucleotide-diphosphate reductase beta subunit [Aeromicrobium marinum DSM 15272] Length = 357 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 49/122 (40%), Positives = 74/122 (60%), Gaps = 1/122 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLHL FGI++I + ENP + T EF + + M+ +A +E AY + +P G +GL Sbjct: 236 VRDESLHLKFGINLILTVLEENPEVATAEFAAEIQQMVLDAVEMEEAYNRDLLPGGILGL 295 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA QY++++A+RR ++G P + T NP WM+ D + NFFE T Y+ A Sbjct: 296 NADYINQYVRYLADRRLEELGFGPHYGAT-NPAKWMATANDTLQLVNFFEATNTSYEVNA 354 Query: 121 EL 122 +L Sbjct: 355 KL 356 >gi|83649535|ref|YP_437970.1| ribonucleotide reductase subunit beta [Hahella chejuensis KCTC 2396] gi|83637578|gb|ABC33545.1| Ribonucleotide reductase, beta subunit [Hahella chejuensis KCTC 2396] Length = 405 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/125 (44%), Positives = 70/125 (56%), Gaps = 5/125 (4%) Query: 1 MRDESLHLNFGIDVINQI-KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59 MRDE +H FGI V+ QI K E L K +T+ EA E YAH + + +G Sbjct: 285 MRDEVMHCAFGIRVVKQIIKEEGVTLDPKAI----KTLWEEAEAAETGYAHFLLKEPILG 340 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 A + +FIANRR Q+ L+ F N PW+ E ++KEKNFFETRVTEYQ G Sbjct: 341 YTAEDHIEQFRFIANRRAKQLKLDEPFPGAGNALPWLDEQASMRKEKNFFETRVTEYQTG 400 Query: 120 AELKW 124 A L+W Sbjct: 401 ASLQW 405 >gi|330949820|gb|EGH50080.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae Cit 7] Length = 359 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 41/69 (59%), Positives = 54/69 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKKEATQMILQGTQLEIEYARDTMPRGVLGM 350 Query: 61 NAPSCEQYM 69 NA E Y+ Sbjct: 351 NAAMMEDYL 359 >gi|28493649|ref|NP_787810.1| ribonucleotide-diphosphate reductase subunit beta [Tropheryma whipplei str. Twist] gi|28572842|ref|NP_789622.1| ribonucleotide-diphosphate reductase subunit beta [Tropheryma whipplei TW08/27] gi|28410975|emb|CAD67360.1| ribonucleotide-diphosphate reductase small chain [Tropheryma whipplei TW08/27] gi|28476691|gb|AAO44779.1| ribonucleotide reductase beta chain [Tropheryma whipplei str. Twist] Length = 327 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 47/120 (39%), Positives = 71/120 (59%), Gaps = 1/120 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLHL FGI++I + ENP L T +F + R M+ +E Y H+ +P G +GL Sbjct: 205 VRDESLHLKFGINLILTVLEENPDLQTSDFADEIRGMIIAGVEMEEEYNHDLLPNGILGL 264 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 N+ QY++++A+RR ++G +P + T NP WM+ D + NFFE T Y+ A Sbjct: 265 NSGYINQYVKYLADRRLEELGFDPEYNVT-NPAKWMATANDTFELVNFFEAINTSYESNA 323 >gi|330949821|gb|EGH50081.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae Cit 7] Length = 65 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 42/65 (64%), Positives = 48/65 (73%) Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 N E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 1 NGAGMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 60 Query: 121 ELKWD 125 L WD Sbjct: 61 ALSWD 65 >gi|50955339|ref|YP_062627.1| ribonucleotide-diphosphate reductase subunit beta [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951821|gb|AAT89522.1| ribonucleoside-diphosphate reductase, beta chain [Leifsonia xyli subsp. xyli str. CTCB07] Length = 329 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 48/121 (39%), Positives = 74/121 (61%), Gaps = 1/121 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLHL FGI++I + ENP L T EF + + M+ +A +E Y + +P G +GL Sbjct: 205 VRDESLHLKFGINLILTVLEENPDLQTPEFAAEIKQMILDAVEMEEQYNRDLLPGGILGL 264 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA QY++++A+RR ++G E +K + NP WM+ D + NFFE+ T Y+ A Sbjct: 265 NANYINQYVKYLADRRLEELGFEAEYKVS-NPAKWMATANDTLELVNFFESTNTSYESNA 323 Query: 121 E 121 + Sbjct: 324 K 324 >gi|90023100|ref|YP_528927.1| amino acid adenylation [Saccharophagus degradans 2-40] gi|89952700|gb|ABD82715.1| Class Ia ribonucleoside-diphosphate reductase beta subunit [Saccharophagus degradans 2-40] Length = 368 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 54/125 (43%), Positives = 72/125 (57%), Gaps = 4/125 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDE++H FGI ++QI IEN T +TM EA E YA + + +G Sbjct: 248 MRDETMHCAFGIQTVSQIIIENC---TNIDVDAIKTMWEEADEAEANYARYILREPILGY 304 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A + +FIANRR Q+GLE F + PW+ E +++KEKNFFETRV EYQ G Sbjct: 305 SANDHIEQFRFIANRRARQLGLEEPFPQAKCALPWLDEQANIRKEKNFFETRVIEYQAGG 364 Query: 121 ELKWD 125 L+WD Sbjct: 365 -LEWD 368 >gi|254492407|ref|ZP_05105579.1| ribonucleoside-diphosphate reductase, beta subunit [Methylophaga thiooxidans DMS010] gi|224462299|gb|EEF78576.1| ribonucleoside-diphosphate reductase, beta subunit [Methylophaga thiooxydans DMS010] Length = 383 Score = 94.0 bits (232), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 55/126 (43%), Positives = 69/126 (54%), Gaps = 5/126 (3%) Query: 1 MRDESLHLNFGIDVINQI-KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59 MRDE +H +FGI V QI K EN L K+ QQ M EA E YA + +G Sbjct: 262 MRDEVMHASFGIRVCKQIMKEENITLDPKKVQQ----MFEEADAAEETYAGYILRDPILG 317 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + ++ ANRR Q+G E F E PW+ E +++KEKNFFET+VTEYQ G Sbjct: 318 YSKEVHHGQFRYTANRRAKQLGFEEPFPGAEATLPWLDEQANMRKEKNFFETKVTEYQTG 377 Query: 120 AELKWD 125 LKWD Sbjct: 378 GGLKWD 383 >gi|256391238|ref|YP_003112802.1| ribonucleoside-diphosphate reductase [Catenulispora acidiphila DSM 44928] gi|256357464|gb|ACU70961.1| Ribonucleoside-diphosphate reductase [Catenulispora acidiphila DSM 44928] Length = 331 Score = 93.6 bits (231), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 4/126 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES+H+ F DV++ ++ E P L+ ++ Q+ R ML EA E +A + + G GL Sbjct: 205 RDESMHMAFAFDVVDTVRAEEPDLFDEKMAQQVREMLAEAVECETQFAGDLLGGGVSGLP 264 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ--QG 119 Y++ +A+RR Q+GLEP++ T NP +M E+ D+++ NFFE RV+ YQ G Sbjct: 265 VADMRAYLEHVADRRLEQLGLEPMYG-TANPLGFM-ELQDVQELSNFFERRVSAYQVAVG 322 Query: 120 AELKWD 125 + +D Sbjct: 323 GSVSFD 328 >gi|145596896|ref|YP_001161193.1| ribonucleoside-diphosphate reductase [Salinispora tropica CNB-440] gi|145306233|gb|ABP56815.1| Ribonucleoside-diphosphate reductase [Salinispora tropica CNB-440] Length = 350 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 41/118 (34%), Positives = 75/118 (63%), Gaps = 2/118 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES+H+ F DV++ ++ E P L+ + +++ + M+ EA E+ +A + + +G GL+ Sbjct: 224 RDESMHMAFAFDVVDTVRAEEPDLFDADLERQVKEMVAEAVDCEVQFAEDLLEQGVSGLS 283 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +Y+Q +A+RR +G+ P++ + NPF +M E+ D+++ NFFE RV+ YQ G Sbjct: 284 LADMREYLQHVADRRLVTLGIAPMYG-SANPFAFM-ELQDVQELSNFFERRVSAYQMG 339 >gi|302867100|ref|YP_003835737.1| ribonucleotide reductase [Micromonospora aurantiaca ATCC 27029] gi|315506490|ref|YP_004085377.1| ribonucleotide reductase [Micromonospora sp. L5] gi|302569959|gb|ADL46161.1| ribonucleotide reductase [Micromonospora aurantiaca ATCC 27029] gi|315413109|gb|ADU11226.1| ribonucleotide reductase [Micromonospora sp. L5] Length = 342 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 42/118 (35%), Positives = 75/118 (63%), Gaps = 2/118 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES+H+ F DV+ ++ E P L+ E +++ + ML EA E+++A + + +G G++ Sbjct: 216 RDESMHMAFAFDVVETVRAEEPDLFDDEMERQVKEMLAEAVECEVSFAEDLLGQGVPGMS 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +Y+Q +A+RR +G+ P++ + NPF +M E+ D+++ NFFE RV+ YQ G Sbjct: 276 LADMREYLQHVADRRLAVLGIAPMYG-SGNPFAFM-ELQDVQELSNFFERRVSAYQVG 331 >gi|87311395|ref|ZP_01093515.1| ribonucleotide-diphosphate reductase beta subunit [Blastopirellula marina DSM 3645] gi|87285807|gb|EAQ77721.1| ribonucleotide-diphosphate reductase beta subunit [Blastopirellula marina DSM 3645] Length = 313 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 41/82 (50%), Positives = 57/82 (69%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP LWT EFQ + ++ +A LEI YA + +P G +GL Sbjct: 229 LRDETVHLNFGIDLINGIKAENPDLWTAEFQAEIIDLIKQAVELEIEYAGDCLPNGILGL 288 Query: 61 NAPSCEQYMQFIANRRCHQIGL 82 N Y+ ++A+RR +IGL Sbjct: 289 NRDLFRDYVHYVADRRVERIGL 310 >gi|159040364|ref|YP_001539617.1| ribonucleoside-diphosphate reductase [Salinispora arenicola CNS-205] gi|157919199|gb|ABW00627.1| Ribonucleoside-diphosphate reductase [Salinispora arenicola CNS-205] Length = 350 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 42/118 (35%), Positives = 75/118 (63%), Gaps = 2/118 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES+H+ F DV++ I+ E P L+ + +++ + M+ EA E +A + + +G GL+ Sbjct: 224 RDESMHMAFAFDVVDTIRAEEPDLFDADLERQIKDMVTEAVDCEAQFAEDLLEQGVSGLS 283 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +Y+Q +A+RR +G+ P++ ++NPF +M E+ D+++ NFFE RV+ YQ G Sbjct: 284 LADMREYLQHVADRRLVTLGIAPIYG-SQNPFAFM-ELQDVQELSNFFERRVSAYQVG 339 >gi|168702494|ref|ZP_02734771.1| ribonucleoside-diphosphate reductase, beta subunit [Gemmata obscuriglobus UQM 2246] Length = 332 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 43/118 (36%), Positives = 71/118 (60%), Gaps = 2/118 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES H+ F VI+ ++ E P L+ E + + ML EA E A+A + + +G GL+ Sbjct: 206 RDESAHMAFAFRVIDTVRREEPDLFDAELEAQIVAMLREAVECETAFARDVLGQGVAGLS 265 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 Y++++A+RR +G+ P+F +NPF +M ++ D+++ NFFE RV+ YQ G Sbjct: 266 LADLRSYLEYVADRRLESLGIAPVFG-AKNPFGFM-DLQDVQELTNFFERRVSAYQLG 321 >gi|167948644|ref|ZP_02535718.1| Ribonucleotide reductase, beta subunit [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 124 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 52/125 (41%), Positives = 64/125 (51%), Gaps = 3/125 (2%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDE LH +FGI V QI +E Q R M E E AYA + +G Sbjct: 3 MRDEVLHASFGIRVAKQIMLEEN---IAPDPQAIREMWDECEAAEDAYAGYILRDPILGY 59 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + +++ANRR QIGL + E PW+ E +L+KEKNFFET VTEYQ G Sbjct: 60 SKDDHMGQFRYVANRRARQIGLSEPYPGAEATLPWLDEQANLRKEKNFFETTVTEYQTGG 119 Query: 121 ELKWD 125 L WD Sbjct: 120 ALNWD 124 >gi|326403282|ref|YP_004283363.1| ribonucleoside-diphosphate reductase beta subunit [Acidiphilium multivorum AIU301] gi|325050143|dbj|BAJ80481.1| ribonucleoside-diphosphate reductase beta subunit [Acidiphilium multivorum AIU301] Length = 338 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 46/131 (35%), Positives = 75/131 (57%), Gaps = 10/131 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK-----SRTMLHEATLLEIAYAHETMPK 55 +RDESLH N I + ENP +WT+E +++ + + HE +++A+ + Sbjct: 208 VRDESLHCNSVIKLFRTFVAENPEIWTEELRREIYLCCATIVDHEDAFIDLAFEFGAVE- 266 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 GL A ++Y+++IA+RR Q+GL PLF +NP PW+ E+++ + NFFE R TE Sbjct: 267 ---GLTAEEVKRYIRYIADRRLLQLGLNPLFHVDKNPLPWLDEMLNAVEHTNFFENRATE 323 Query: 116 YQQGAEL-KWD 125 Y + + WD Sbjct: 324 YSKASTAGSWD 334 >gi|58584525|ref|YP_198098.1| ribonucleotide-diphosphate reductase subunit beta [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418841|gb|AAW70856.1| Ribonucleotide reductase, beta subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 331 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 45/120 (37%), Positives = 68/120 (56%), Gaps = 1/120 (0%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60 RDE+LH N I++ N EN +W EF++ + LE + G V GL Sbjct: 193 RDETLHTNSIINLFNTFIKENNEIWNDEFKEGLYSACRTIVGLEDEFIKLAFDLGDVEGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A Y+++IANRR Q+GL+P++ +NP PW+ E+++ + NFFE RVTEY + A Sbjct: 253 SAEEVRNYIRYIANRRLMQLGLKPIYDINDNPLPWLDEILNGVEHTNFFENRVTEYSRAA 312 >gi|148259750|ref|YP_001233877.1| ribonucleotide-diphosphate reductase subunit beta [Acidiphilium cryptum JF-5] gi|146401431|gb|ABQ29958.1| Ribonucleoside-diphosphate reductase [Acidiphilium cryptum JF-5] Length = 338 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 46/131 (35%), Positives = 75/131 (57%), Gaps = 10/131 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK-----SRTMLHEATLLEIAYAHETMPK 55 +RDESLH N I + ENP +WT+E +++ + + HE +++A+ + Sbjct: 208 VRDESLHCNSVIKLFRTFVAENPEIWTEELRREIYLCCATIVDHEDAFIDLAFEFGAVE- 266 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 GL A ++Y+++IA+RR Q+GL PLF +NP PW+ E+++ + NFFE R TE Sbjct: 267 ---GLTAEEVKRYIRYIADRRLLQLGLNPLFHVDKNPLPWLDEMLNAVEHTNFFENRATE 323 Query: 116 YQQGAEL-KWD 125 Y + + WD Sbjct: 324 YSKASTAGSWD 334 >gi|225873704|ref|YP_002755163.1| ribonucleoside-diphosphate reductase, beta subunit [Acidobacterium capsulatum ATCC 51196] gi|225791613|gb|ACO31703.1| ribonucleoside-diphosphate reductase, beta subunit [Acidobacterium capsulatum ATCC 51196] Length = 340 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 2/119 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES HL F +V+N ++ + P LW + + MLHEA E +A + + G GL+ Sbjct: 214 RDESCHLEFAFEVVNVVRSQEPDLWDAQLEADIVEMLHEAVDAETQFAEDLLSGGVAGLS 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY+ ++A+ R ++G+ P F +NPF +M E+ D+++ NFFE RV+ YQ Sbjct: 274 VRDMRQYLGYVADSRLQRLGIAPAFG-VKNPFSFM-ELQDVQELTNFFERRVSAYQTAV 330 >gi|297157411|gb|ADI07123.1| ribonucleoside-diphosphate reductase [Streptomyces bingchenggensis BCW-1] Length = 340 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 43/120 (35%), Positives = 74/120 (61%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+NF V++ ++ E P L+ E QQ+ ML EA E+ +A + +G G+N Sbjct: 214 RDETMHMNFAFQVVDTVREEEPELFDDELQQQVTDMLREAVEAELQFARDLCGEGLPGMN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++ +A++R ++G P++ +ENPF +M E+ ++++ NFFE R + YQ E Sbjct: 274 TESMRQYLECVADQRLARLGFAPVYG-SENPFSFM-ELQNVQELTNFFERRASAYQVAVE 331 >gi|289425969|ref|ZP_06427716.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes SK187] gi|289153512|gb|EFD02226.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes SK187] gi|313763766|gb|EFS35130.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL013PA1] gi|313802998|gb|EFS44206.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL110PA2] gi|313816916|gb|EFS54630.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL059PA1] gi|313829718|gb|EFS67432.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL063PA2] gi|313839374|gb|EFS77088.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL086PA1] gi|314916474|gb|EFS80305.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL005PA4] gi|314932316|gb|EFS96147.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL067PA1] gi|314956590|gb|EFT00842.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL027PA1] gi|314959472|gb|EFT03574.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL002PA1] gi|314964864|gb|EFT08964.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL082PA1] gi|314968630|gb|EFT12728.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL037PA1] gi|315079174|gb|EFT51177.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL053PA2] gi|315100241|gb|EFT72217.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL059PA2] gi|315102565|gb|EFT74541.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL046PA1] gi|315109517|gb|EFT81493.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL030PA2] gi|327455890|gb|EGF02545.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL087PA3] gi|327458042|gb|EGF04697.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL083PA2] gi|328757204|gb|EGF70820.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL087PA1] gi|328757585|gb|EGF71201.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL025PA2] Length = 328 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 1/120 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLHL FG+++I + ENP + T EF + M+ + +E Y + +P+G +G+ Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGILGM 263 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA Y++++A+RR ++G EP ++ NP WM+ D + NFFE T Y+ A Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEYR-VANPAKWMATANDTLQVVNFFEATNTSYEVNA 322 >gi|314918862|gb|EFS82693.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL050PA1] gi|314921071|gb|EFS84902.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL050PA3] Length = 328 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 1/120 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLHL FG+++I + ENP + T EF + M+ + +E Y + +P+G +G+ Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGILGM 263 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA Y++++A+RR ++G EP ++ NP WM+ D + NFFE T Y+ A Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEYR-VANPAKWMATANDTLQVVNFFEATNTSYEVNA 322 >gi|50843560|ref|YP_056787.1| ribonucleotide-diphosphate reductase subunit beta [Propionibacterium acnes KPA171202] gi|282854887|ref|ZP_06264221.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes J139] gi|289427904|ref|ZP_06429608.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes J165] gi|295131638|ref|YP_003582301.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes SK137] gi|50841162|gb|AAT83829.1| ribonucleoside-diphosphate reductase beta chain [Propionibacterium acnes KPA171202] gi|282582033|gb|EFB87416.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes J139] gi|289158787|gb|EFD06987.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes J165] gi|291376691|gb|ADE00546.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes SK137] gi|313771782|gb|EFS37748.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL074PA1] gi|313808408|gb|EFS46875.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL087PA2] gi|313810605|gb|EFS48319.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL083PA1] gi|313813765|gb|EFS51479.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL025PA1] gi|313818171|gb|EFS55885.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL046PA2] gi|313821029|gb|EFS58743.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL036PA1] gi|313823899|gb|EFS61613.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL036PA2] gi|313827161|gb|EFS64875.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL063PA1] gi|313831646|gb|EFS69360.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL007PA1] gi|313834800|gb|EFS72514.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL056PA1] gi|314924366|gb|EFS88197.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL001PA1] gi|314927054|gb|EFS90885.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL036PA3] gi|314961874|gb|EFT05975.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL002PA2] gi|314965892|gb|EFT09991.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL082PA2] gi|314974996|gb|EFT19091.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL053PA1] gi|314977908|gb|EFT22002.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL045PA1] gi|314979603|gb|EFT23697.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL072PA2] gi|314981613|gb|EFT25706.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL110PA3] gi|314984684|gb|EFT28776.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL005PA1] gi|314988338|gb|EFT32429.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL005PA2] gi|314990428|gb|EFT34519.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL005PA3] gi|315082361|gb|EFT54337.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL078PA1] gi|315083809|gb|EFT55785.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL027PA2] gi|315087306|gb|EFT59282.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL002PA3] gi|315089724|gb|EFT61700.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL072PA1] gi|315092253|gb|EFT64229.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL110PA4] gi|315094826|gb|EFT66802.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL060PA1] gi|315095599|gb|EFT67575.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL038PA1] gi|315104692|gb|EFT76668.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL050PA2] gi|315107754|gb|EFT79730.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL030PA1] gi|327326613|gb|EGE68401.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL096PA3] gi|327332877|gb|EGE74609.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL096PA2] gi|327335278|gb|EGE76988.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL097PA1] gi|327447704|gb|EGE94358.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL043PA2] gi|327448579|gb|EGE95233.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL043PA1] gi|327449568|gb|EGE96222.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL013PA2] gi|328757395|gb|EGF71011.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL020PA1] gi|328762002|gb|EGF75508.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL099PA1] gi|332676502|gb|AEE73318.1| ribonucleoside-diphosphate reductase subunit beta [Propionibacterium acnes 266] Length = 328 Score = 90.1 bits (222), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 1/120 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLHL FG+++I + ENP + T EF + M+ + +E Y + +P+G +G+ Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGILGM 263 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA Y++++A+RR ++G EP ++ NP WM+ D + NFFE T Y+ A Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEYRVV-NPAKWMATANDTLQVVNFFEATNTSYEVNA 322 >gi|327328671|gb|EGE70431.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL103PA1] Length = 328 Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 1/120 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLHL FG+++I + ENP + T EF + M+ + +E Y + +P+G +G+ Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGILGM 263 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA Y++++A+RR ++G EP ++ NP WM+ D + NFFE T Y+ A Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEYRIV-NPAKWMATANDTLQVVNFFEATNTSYEVNA 322 >gi|88607783|ref|YP_505152.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma phagocytophilum HZ] gi|88598846|gb|ABD44316.1| ribonucleoside-diphosphate reductase, beta subunit [Anaplasma phagocytophilum HZ] Length = 323 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 46/120 (38%), Positives = 68/120 (56%), Gaps = 1/120 (0%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60 RDESLH + I + N EN +W + +Q+ +LE + G V GL Sbjct: 193 RDESLHTDSIIRLFNTFVHENGEIWDDDLKQELYDACKVIVMLEDEFIDLAFALGDVEGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A ++Y++FIANRR Q+ LEP++ ENP PW+ E+++ + NFFE RVTEY + A Sbjct: 253 SACEVKRYIRFIANRRLKQLHLEPIYDVAENPLPWLDEILNGVEHTNFFENRVTEYARAA 312 >gi|313793687|gb|EFS41718.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL110PA1] gi|327456018|gb|EGF02673.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL092PA1] Length = 328 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 43/120 (35%), Positives = 69/120 (57%), Gaps = 1/120 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLHL FG+++I + ENP + T EF + M+ + +E Y + +P+G G+ Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGIRGM 263 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA Y++++A+RR ++G EP ++ NP WM+ D + NFFE T Y+ A Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEYR-VANPAKWMATANDTLQVVNFFEATNTSYEVNA 322 >gi|221633388|ref|YP_002522613.1| ribonucleotide-diphosphate reductase subunit beta [Thermomicrobium roseum DSM 5159] gi|221156578|gb|ACM05705.1| ribonucleoside-diphosphate reductase, beta subunit [Thermomicrobium roseum DSM 5159] Length = 328 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 ++DESLHL+FGI +I I E+P + + F ++ R ++ A LE AY +P+ +GL Sbjct: 207 LKDESLHLSFGIHLITTILEEHPEIMSAAFGRQLRELILRAVELEEAYNRAVLPEPLIGL 266 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +A +Y+++IA+RR ++GL P+ NP WM +D+ + NFFE R Y+ G Sbjct: 267 DADVLNRYVRYIADRRLEELGL-PIAFGEPNPLRWMVAQVDMPEIVNFFEARNIHYEVG 324 >gi|254449372|ref|ZP_05062814.1| ribonucleoside-diphosphate reductase, beta subunit [gamma proteobacterium HTCC5015] gi|198261018|gb|EDY85321.1| ribonucleoside-diphosphate reductase, beta subunit [gamma proteobacterium HTCC5015] Length = 404 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 50/124 (40%), Positives = 66/124 (53%), Gaps = 3/124 (2%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDE +H +FG+ V QI E + + R M E E YA + +G Sbjct: 284 MRDEVMHASFGLRVARQIMREEN---IQPDPKAMREMWDECEAAEEGYARYLLRDPILGY 340 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A +FIANRR +++ LE F EN PW+ E +++KEKNFFETRVTEYQ G Sbjct: 341 SAEDHVNQFRFIANRRANKLSLEEPFPGAENALPWLDEQANMRKEKNFFETRVTEYQVGG 400 Query: 121 ELKW 124 L W Sbjct: 401 GLTW 404 >gi|190570498|ref|YP_001974856.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019257|ref|ZP_03335064.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190356770|emb|CAQ54129.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995366|gb|EEB56007.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 329 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 1/120 (0%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60 RDE+LH N I++ N EN +W EF+++ + LE + G V GL Sbjct: 193 RDETLHTNSIINLFNTFIKENNEIWNDEFKEELYSACRTIVELEDEFISLAFDLGDVEGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A Y+++IANRR Q+GL+ ++ +NP PW+ E+++ + NFFE RVTEY + A Sbjct: 253 SAEEVRNYIRYIANRRLTQLGLKSIYNVKDNPIPWLDEILNGVEHTNFFENRVTEYSRAA 312 >gi|29829569|ref|NP_824203.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces avermitilis MA-4680] gi|29606677|dbj|BAC70738.1| putative ribonucleoside-diphosphate reductase beta chain [Streptomyces avermitilis MA-4680] Length = 338 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 42/124 (33%), Positives = 73/124 (58%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F +V++ ++ E P L+ E QQ+ ML EA E+ + + G G+N Sbjct: 212 RDETMHMSFAFEVVDTVRKEEPELFDDELQQQVTDMLREAVEAELQFGRDLCGDGLPGMN 271 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++ +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E Sbjct: 272 TESMRQYLECVADQRLQRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRASAYQVAVE 329 Query: 122 LKWD 125 D Sbjct: 330 GTVD 333 >gi|126664354|ref|ZP_01735338.1| Ribonucleotide reductase, beta subunit [Marinobacter sp. ELB17] gi|126630680|gb|EBA01294.1| Ribonucleotide reductase, beta subunit [Marinobacter sp. ELB17] Length = 352 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 49/125 (39%), Positives = 74/125 (59%), Gaps = 5/125 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKS-RTMLHEATLLEIAYAHETMPKGFVG 59 +RDE++H +FG+ V+NQI +E ++ F K+ R M E+ E YA+ + +G Sbjct: 232 LRDEAMHFSFGLKVVNQI-LEEENI---SFDPKAVRDMWDESEAAESDYANYILRDPILG 287 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +A + +F+ANRR + L F +N PW+ E ++KEKNFFETRV EYQ G Sbjct: 288 YSAEYHIEQFRFVANRRARTVNLPEPFPGAKNVSPWLEEQATMRKEKNFFETRVIEYQTG 347 Query: 120 AELKW 124 A+L+W Sbjct: 348 AQLEW 352 >gi|91763118|ref|ZP_01265082.1| ribonucleotide-diphosphate reductase beta subunit [Candidatus Pelagibacter ubique HTCC1002] gi|91717531|gb|EAS84182.1| ribonucleotide-diphosphate reductase beta subunit [Candidatus Pelagibacter ubique HTCC1002] Length = 342 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 9/125 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQ----QKSRTML-HEATLLEIAYAHETMPK 55 +RDE+LH N I + + ENP +WT E + + RT++ HE +++A+ M Sbjct: 212 VRDETLHCNSMIRLFKEFIHENPEIWTPELKAELYKACRTIIEHEDAFIDLAFEMGPMQ- 270 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 GL A + Y++FIANRR Q+GLEP++ +NP W+ +++ + NFFE R TE Sbjct: 271 ---GLTAQDVKLYIRFIANRRLSQLGLEPIYDVDKNPLTWLDSMLNAVEHMNFFEGRSTE 327 Query: 116 YQQGA 120 Y + A Sbjct: 328 YSKAA 332 >gi|58700135|ref|ZP_00374651.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Drosophila ananassae] gi|58533347|gb|EAL57830.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Drosophila ananassae] Length = 225 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 1/120 (0%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60 RDE+LH N I + N EN +W EF+++ + LE + G V GL Sbjct: 105 RDETLHTNSIIMLFNTFIKENNEIWDNEFKEELYSACRTIVELEDEFIKLAFDLGDVEGL 164 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A Y++++ANRR Q+GLE ++ +NP PW+ E+++ + NFFE RVTEY + A Sbjct: 165 SAEEVRNYIRYVANRRLMQLGLESIYDVNDNPIPWLDEILNGVEHTNFFENRVTEYSRAA 224 >gi|71083845|ref|YP_266565.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Pelagibacter ubique HTCC1062] gi|71062958|gb|AAZ21961.1| ribonucleoside-diphosphate reductase beta chain [Candidatus Pelagibacter ubique HTCC1062] Length = 337 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 9/125 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQ----QKSRTML-HEATLLEIAYAHETMPK 55 +RDE+LH N I + + ENP +WT E + + RT++ HE +++A+ M Sbjct: 207 VRDETLHCNSMIRLFKEFIHENPEIWTPELKAELYKACRTIIEHEDAFIDLAFEMGPMQ- 265 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 GL A + Y++FIANRR Q+GLEP++ +NP W+ +++ + NFFE R TE Sbjct: 266 ---GLTAQDVKLYIRFIANRRLSQLGLEPIYDVDKNPLTWLDSMLNAVEHMNFFEGRSTE 322 Query: 116 YQQGA 120 Y + A Sbjct: 323 YSKAA 327 >gi|329939692|ref|ZP_08288993.1| ribonucleotide-diphosphate reductase small chain [Streptomyces griseoaurantiacus M045] gi|329301262|gb|EGG45157.1| ribonucleotide-diphosphate reductase small chain [Streptomyces griseoaurantiacus M045] Length = 347 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 73/120 (60%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F DV++ ++ E P L+ +E ++ ML EA E+ +A + G G+N Sbjct: 221 RDETMHMSFAFDVVDTVRKEEPGLFDEELGRQVTDMLREAVEAELQFARDLCGDGLPGMN 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY+Q +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E Sbjct: 281 TESMRQYLQCVADQRLVRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRASAYQVAVE 338 >gi|317122809|ref|YP_004102812.1| ribonucleoside-diphosphate reductase [Thermaerobacter marianensis DSM 12885] gi|315592789|gb|ADU52085.1| Ribonucleoside-diphosphate reductase [Thermaerobacter marianensis DSM 12885] Length = 336 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 43/121 (35%), Positives = 72/121 (59%), Gaps = 1/121 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 ++DESLHL+FGI +I + E+P L T EF ++ + ++ A LE Y +P+ +G+ Sbjct: 214 LKDESLHLSFGIHLITTLLEEHPELMTPEFAREVKGLILRAVELERDYNRALLPRPILGV 273 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A Y++++ +RR ++GL P F T NP WM+ +D+ + NFFE R Y+ A Sbjct: 274 SADYLNAYIEYVTDRRLDELGLGPHFG-TPNPAQWMATEVDVPEIVNFFEARNIHYEVAA 332 Query: 121 E 121 + Sbjct: 333 D 333 >gi|254455551|ref|ZP_05068980.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus Pelagibacter sp. HTCC7211] gi|207082553|gb|EDZ59979.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus Pelagibacter sp. HTCC7211] Length = 335 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 9/125 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWT----KEFQQKSRTML-HEATLLEIAYAHETMPK 55 +RDE+LH N I + + ENP +WT KE + RT++ HE +++A+ M Sbjct: 205 VRDETLHCNSMIRIFKEFINENPEIWTPKLKKELYEACRTIIAHEDAFIDLAFEMGPME- 263 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 GL A + Y++FI NRR Q+GLEP++ +NP W+ +++ + NFFE R TE Sbjct: 264 ---GLTAQEVKDYIRFIGNRRLTQLGLEPIYDVDKNPLGWLDTMLNAVEHMNFFEGRATE 320 Query: 116 YQQGA 120 Y + + Sbjct: 321 YSKAS 325 >gi|297202281|ref|ZP_06919678.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces sviceus ATCC 29083] gi|197710199|gb|EDY54233.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces sviceus ATCC 29083] Length = 340 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 73/124 (58%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F DV++ ++ E P L+ QQ+ ML EA E+ +A + G G+N Sbjct: 214 RDETMHMSFAFDVVDTVRKEEPELFDDRLQQQVTDMLAEAVEAELQFARDLCGDGLPGMN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++ +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E Sbjct: 274 TESMRQYLECVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 331 Query: 122 LKWD 125 D Sbjct: 332 GTVD 335 >gi|258542157|ref|YP_003187590.1| ribonucleotide-diphosphate reductase subunit beta [Acetobacter pasteurianus IFO 3283-01] gi|256633235|dbj|BAH99210.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter pasteurianus IFO 3283-01] gi|256636294|dbj|BAI02263.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter pasteurianus IFO 3283-03] gi|256639347|dbj|BAI05309.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter pasteurianus IFO 3283-07] gi|256642403|dbj|BAI08358.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter pasteurianus IFO 3283-22] gi|256645458|dbj|BAI11406.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter pasteurianus IFO 3283-26] gi|256648511|dbj|BAI14452.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter pasteurianus IFO 3283-32] gi|256651564|dbj|BAI17498.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654555|dbj|BAI20482.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter pasteurianus IFO 3283-12] Length = 339 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 45/125 (36%), Positives = 73/125 (58%), Gaps = 9/125 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTML-HEATLLEIAYAHETMPK 55 +RDE+LH I + ENP LWT++ + + RT++ HE +++A+ + Sbjct: 204 VRDETLHCLSIIRLFRVFIQENPELWTEQLRTELTDICRTIVEHEEAFIDLAFEMGAVE- 262 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 GLNA + Y+ FIA+RR Q+GLEP++ T NP PW+ ++++ + NFFE R TE Sbjct: 263 ---GLNAEQVKTYIHFIADRRLTQLGLEPIYNTTTNPLPWLDDMLNAVEHTNFFENRATE 319 Query: 116 YQQGA 120 Y + + Sbjct: 320 YSRAS 324 >gi|42520108|ref|NP_966023.1| ribonucleotide-diphosphate reductase subunit beta [Wolbachia endosymbiont of Drosophila melanogaster] gi|58696705|ref|ZP_00372253.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Drosophila simulans] gi|58698234|ref|ZP_00373154.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Drosophila ananassae] gi|225630036|ref|YP_002726827.1| ribonucleotide-diphosphate reductase beta subunit [Wolbachia sp. wRi] gi|42409845|gb|AAS13957.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Drosophila melanogaster] gi|58535261|gb|EAL59340.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Drosophila ananassae] gi|58537117|gb|EAL60231.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Drosophila simulans] gi|225592017|gb|ACN95036.1| ribonucleotide-diphosphate reductase beta subunit [Wolbachia sp. wRi] Length = 329 Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 1/120 (0%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60 RDE+LH N I + N EN +W EF+++ + LE + G V GL Sbjct: 193 RDETLHTNSIIMLFNTFIKENNEIWDNEFKEELYSACRTIVELEDEFIKLAFDLGDVEGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A Y++++ANRR Q+GLE ++ +NP PW+ E+++ + NFFE RVTEY + A Sbjct: 253 SAEEVRNYIRYVANRRLMQLGLESIYDVNDNPIPWLDEILNGVEHTNFFENRVTEYSRAA 312 >gi|294631326|ref|ZP_06709886.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces sp. e14] gi|292834659|gb|EFF93008.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces sp. e14] Length = 339 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 42/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F DV++ ++ E P L+ + +Q+ ML EA E+ +A + G G+N Sbjct: 213 RDETMHMSFAFDVVDTVRKEEPDLFDDQLEQQVTDMLREAVEAELQFARDLCGDGLPGMN 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++ +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E Sbjct: 273 TDSMRQYLECVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 330 Query: 122 LKWD 125 D Sbjct: 331 GTVD 334 >gi|88861512|ref|ZP_01136127.1| ribonucleotide-diphosphate reductase beta subunit [Pseudoalteromonas tunicata D2] gi|88816487|gb|EAR26327.1| ribonucleotide-diphosphate reductase beta subunit [Pseudoalteromonas tunicata D2] Length = 219 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 9/125 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWT----KEFQQKSRTML-HEATLLEIAYAHETMPK 55 +RDE+LH N I + + ENP +WT KE + R ++ HE +++A+ M Sbjct: 89 VRDETLHCNSMIRIFKEFIKENPEIWTPTLKKELYEACRIIVEHEDAFIDLAFEMGPME- 147 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 GL A + Y++FIANRR Q+GLEP++ +NP W+ +++ + NFFE R TE Sbjct: 148 ---GLTAQEVKDYIRFIANRRLIQLGLEPIYDVQKNPLTWLDTMLNAVEHMNFFEGRATE 204 Query: 116 YQQGA 120 Y + + Sbjct: 205 YSKAS 209 >gi|239947951|ref|ZP_04699704.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsia endosymbiont of Ixodes scapularis] gi|239922227|gb|EER22251.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsia endosymbiont of Ixodes scapularis] Length = 327 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 45/125 (36%), Positives = 72/125 (57%), Gaps = 9/125 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55 +RDE+LH N I + IENP +WT+ +++ T++H E +E+A+ Sbjct: 189 VRDETLHTNSIITLFKTFVIENPEVWTETLRKRIYEACTTIVHFEDAFIELAFE----VG 244 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 G GL A QY+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TE Sbjct: 245 GIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATE 304 Query: 116 YQQGA 120 Y + A Sbjct: 305 YSKAA 309 >gi|256825983|ref|YP_003149943.1| ribonucleotide reductase subunit beta [Kytococcus sedentarius DSM 20547] gi|256689376|gb|ACV07178.1| ribonucleotide reductase, beta subunit [Kytococcus sedentarius DSM 20547] Length = 365 Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES+H+ F +V+ ++ E P L+ E + R ML EA E +A + + G GL+ Sbjct: 239 RDESMHMAFAFEVVETVRSEEPDLFDAEMAGQVRQMLMEAVDAEAQFAEDLLGMGVAGLS 298 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 Y++ +A+RR Q+G+ ++ T+NP +M E+ D+++ NFFE RV+ YQ G E Sbjct: 299 VADMRAYLENVADRRAVQLGMPEIYG-TKNPLAFM-ELQDVQELSNFFERRVSAYQVGVE 356 >gi|329113329|ref|ZP_08242110.1| Ribonucleoside-diphosphate reductase subunit beta [Acetobacter pomorum DM001] gi|326697154|gb|EGE48814.1| Ribonucleoside-diphosphate reductase subunit beta [Acetobacter pomorum DM001] Length = 339 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 45/125 (36%), Positives = 73/125 (58%), Gaps = 9/125 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTML-HEATLLEIAYAHETMPK 55 +RDE+LH I + ENP LWT++ + + RT++ HE +++A+ + Sbjct: 204 VRDETLHCLSIIRLFRVFIQENPELWTEQLRTELTDICRTIVEHEEAFIDLAFEMGAVE- 262 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 GLNA + Y+ FIA+RR Q+GLEP++ T NP PW+ ++++ + NFFE R TE Sbjct: 263 ---GLNAEQVKTYIHFIADRRLTQLGLEPIYNTTTNPLPWLDDMLNAVEHTNFFENRSTE 319 Query: 116 YQQGA 120 Y + + Sbjct: 320 YSRAS 324 >gi|302554045|ref|ZP_07306387.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces viridochromogenes DSM 40736] gi|302471663|gb|EFL34756.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces viridochromogenes DSM 40736] Length = 341 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 42/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F DV++ ++ E P L+ + +Q+ ML EA E+ +A + G G+N Sbjct: 215 RDETMHMSFAFDVVDTVRKEEPELFDDQLRQEVTDMLREAVEAELQFARDLCGDGLPGMN 274 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++ +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E Sbjct: 275 TESMRQYLECVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 332 Query: 122 LKWD 125 D Sbjct: 333 GTVD 336 >gi|239982206|ref|ZP_04704730.1| ribonucleotide-diphosphate reductase small chain [Streptomyces albus J1074] gi|291454052|ref|ZP_06593442.1| ribonucleotide-diphosphate reductase subunit small [Streptomyces albus J1074] gi|291357001|gb|EFE83903.1| ribonucleotide-diphosphate reductase subunit small [Streptomyces albus J1074] Length = 350 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 74/120 (61%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F DV++ ++ E P L+ + Q++ ML EA E+ +A + G G+N Sbjct: 224 RDETMHMSFAFDVVDTVRKEEPELFDDKLQEQVVAMLKEAVEAELQFARDLCGDGLPGMN 283 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S +Y++ +A++R ++G P++ ++NPF +M E+ +++ NFFE RV+ YQ E Sbjct: 284 TESMREYLECVADQRLTRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFERRVSAYQVAVE 341 >gi|99036000|ref|ZP_01315041.1| hypothetical protein Wendoof_01000112 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 329 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 1/120 (0%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60 RDE+LH N I + N EN +W EF+++ + LE + G V GL Sbjct: 193 RDETLHTNSIIMLFNTFIKENNEIWDNEFKEELYSACRTIVELEDEFIKLAFDLGDVEGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A Y++++ANRR Q+GLE ++ +NP PW+ E+++ + NFFE RVTEY + A Sbjct: 253 SAEEVRNYIRYVANRRLMQLGLESIYDVNDNPTPWLDEILNGVEHTNFFENRVTEYSRAA 312 >gi|225677302|ref|ZP_03788281.1| ribonucleotide-diphosphate reductase beta [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590665|gb|EEH11913.1| ribonucleotide-diphosphate reductase beta [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 329 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 1/120 (0%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60 RDE+LH N I + N EN +W EF+++ + LE + G V GL Sbjct: 193 RDETLHTNSIIMLFNTFIKENNEIWDDEFKEELYSACRTIVELEDEFIKLAFDFGDVEGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A Y+ ++ANRR Q+GLE ++ +NP PW+ E+++ + NFFE RVTEY + A Sbjct: 253 SAEEVRNYIHYVANRRLMQLGLESIYDVNDNPIPWLDEILNGVEHTNFFENRVTEYSRAA 312 >gi|110802082|ref|YP_699620.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium perfringens SM101] gi|110682583|gb|ABG85953.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium perfringens SM101] Length = 344 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 46/123 (37%), Positives = 69/123 (56%), Gaps = 2/123 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I ++K E P ++TKE +++ R M+ EIA+ H + G+N Sbjct: 218 RDENTHLWLFRSIIKELKEEIPEVFTKELKEELREMMRTGVEHEIAWGHYVIGDNVTGIN 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 E+Y+++I N R IGLEPLF+ Y ENP PW+ D + K +FFE + T Y + Sbjct: 278 KNLIERYIKYIGNLRAKAIGLEPLFEGYNENPAPWVDYYADANQVKTDFFEAKSTAYAKA 337 Query: 120 AEL 122 L Sbjct: 338 GAL 340 >gi|307328555|ref|ZP_07607729.1| Ribonucleoside-diphosphate reductase [Streptomyces violaceusniger Tu 4113] gi|306885823|gb|EFN16835.1| Ribonucleoside-diphosphate reductase [Streptomyces violaceusniger Tu 4113] Length = 340 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 72/120 (60%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES+H+ F V++ ++ E P L+ E +Q+ ML EA E+ +A + G G+N Sbjct: 214 RDESMHMEFAFSVVDTVREEEPDLFDDELRQQVTDMLKEAVEAELQFARDLCGDGLPGMN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S ++Y+Q +A++R ++G +F +ENPF +M E+ ++++ NFFE R + YQ E Sbjct: 274 TASMQEYLQCVADQRLMRLGFPAVFG-SENPFSFM-ELQNVQELTNFFERRASAYQVAVE 331 >gi|302558498|ref|ZP_07310840.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces griseoflavus Tu4000] gi|302476116|gb|EFL39209.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces griseoflavus Tu4000] Length = 341 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 42/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F DV++ ++ E P L+ ++ Q+ ML EA E+ +A + G G+N Sbjct: 215 RDETMHMSFAFDVVDTVRKEEPELFDEQLGQQVTAMLREAVEAELQFARDLCGDGLPGMN 274 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++ +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E Sbjct: 275 TESMRQYLECVADQRLVRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 332 Query: 122 LKWD 125 D Sbjct: 333 GTVD 336 >gi|313836278|gb|EFS73992.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL037PA2] gi|314928743|gb|EFS92574.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL044PA1] gi|314971220|gb|EFT15318.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL037PA3] gi|328906508|gb|EGG26283.1| ribonucleotide-diphosphate reductase subunit beta [Propionibacterium sp. P08] Length = 324 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 45/120 (37%), Positives = 71/120 (59%), Gaps = 5/120 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLHL FG+++I + ENP + T EF + M+ + +E Y + +P+G G+ Sbjct: 204 VRDESLHLKFGMNLILTVLEENPDIATDEFAVEIHDMILKGVEMEAQYNRDMLPRGIPGM 263 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA Y++++A+RR ++GLEP + + NP WM+ D + NFFET T Y+ A Sbjct: 264 NA----DYVKYLADRRLEELGLEPEY-HVANPAKWMATANDTLQLVNFFETTNTSYEVNA 318 >gi|254388985|ref|ZP_05004216.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces clavuligerus ATCC 27064] gi|294814921|ref|ZP_06773564.1| Ribonucleoside-diphosphate reductase beta chain protein [Streptomyces clavuligerus ATCC 27064] gi|326443293|ref|ZP_08218027.1| Ribonucleoside-diphosphate reductase [Streptomyces clavuligerus ATCC 27064] gi|197702703|gb|EDY48515.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces clavuligerus ATCC 27064] gi|218078699|emb|CAB90708.3| class Ia ribonucleotide-diphosphate reductase small subunit chain [Streptomyces clavuligerus ATCC 27064] gi|294327520|gb|EFG09163.1| Ribonucleoside-diphosphate reductase beta chain protein [Streptomyces clavuligerus ATCC 27064] Length = 339 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 42/124 (33%), Positives = 73/124 (58%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+NF +V++ ++ E P L+ QQ+ ML EA E+ ++ + G G+N Sbjct: 213 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLKEAVEAELQFSRDLCGDGLPGMN 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S +Y+Q +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E Sbjct: 273 TESMREYLQCVADQRLARLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 330 Query: 122 LKWD 125 D Sbjct: 331 GSVD 334 >gi|296116311|ref|ZP_06834927.1| ribonucleotide-diphosphate reductase subunit beta [Gluconacetobacter hansenii ATCC 23769] gi|295977130|gb|EFG83892.1| ribonucleotide-diphosphate reductase subunit beta [Gluconacetobacter hansenii ATCC 23769] Length = 334 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 1/121 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDE+LH + ENP +WT++ Q R + + E A+ + G V G Sbjct: 204 VRDETLHCVSMARLFRVFVQENPEIWTQKLQDDIRQICRDIVEHEDAFIDLSFEMGPVEG 263 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L+A ++Y++F+ANRR Q+GL+ L+ NP PW+ E+++ + NFFE R TEY + Sbjct: 264 LDAAQVKRYIRFVANRRLGQLGLDGLYDVATNPLPWVDEMVNAVEHANFFENRSTEYSRA 323 Query: 120 A 120 A Sbjct: 324 A 324 >gi|330994651|ref|ZP_08318574.1| putative ribonucleoside-diphosphate reductase small subunit [Gluconacetobacter sp. SXCC-1] gi|329758292|gb|EGG74813.1| putative ribonucleoside-diphosphate reductase small subunit [Gluconacetobacter sp. SXCC-1] Length = 365 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDESLH + + ENP +WT + R + + E A+ + G V G Sbjct: 234 VRDESLHCDSMARLFRVFVQENPEIWTDTLRDDIRQICRDIVEHEDAFIDLSFEMGAVEG 293 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L+A ++Y++F+ANRR Q+GL+ ++ NP PW+ E+++ + NFFE R TEY + Sbjct: 294 LDAGQVKRYIRFVANRRLGQLGLDGIYDIATNPLPWVDEMVNAVEHANFFENRATEYSRA 353 Query: 120 AEL-KWD 125 + WD Sbjct: 354 STTGTWD 360 >gi|302542646|ref|ZP_07294988.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces hygroscopicus ATCC 53653] gi|302460264|gb|EFL23357.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces himastatinicus ATCC 53653] Length = 343 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 41/120 (34%), Positives = 71/120 (59%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES+H+ F V++ ++ E P L+ + +++ ML EA E+ +AH+ G G+N Sbjct: 217 RDESMHMEFAFSVVDTVREEEPDLFDDDLERQVTDMLKEAVEAELQFAHDLCGDGLPGMN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S Y++ +A++R ++G +F +ENPF +M E+ D+++ NFFE R + YQ E Sbjct: 277 TESMRAYLECVADQRLARLGFPAVFG-SENPFSFM-ELQDVQELTNFFERRASAYQVAVE 334 >gi|328950373|ref|YP_004367708.1| Ribonucleoside-diphosphate reductase [Marinithermus hydrothermalis DSM 14884] gi|328450697|gb|AEB11598.1| Ribonucleoside-diphosphate reductase [Marinithermus hydrothermalis DSM 14884] Length = 332 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 43/119 (36%), Positives = 70/119 (58%), Gaps = 1/119 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 ++DESLHL+FG+ +I E + T ++ R ++ EA LE AY +P+ +GL Sbjct: 211 LKDESLHLSFGLHLITGFLEEYSEVMTPRLAREVRGLILEAVQLERAYNQALLPRPILGL 270 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +A + Y++++A+RR ++GLE F T NP WM+ +D+ + NFFE T Y+ G Sbjct: 271 SAETLNAYVEYVADRRLEELGLEAAFG-TPNPAKWMATEVDVPEIVNFFEAVNTSYEVG 328 >gi|313903043|ref|ZP_07836438.1| Ribonucleoside-diphosphate reductase [Thermaerobacter subterraneus DSM 13965] gi|313466767|gb|EFR62286.1| Ribonucleoside-diphosphate reductase [Thermaerobacter subterraneus DSM 13965] Length = 336 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 42/121 (34%), Positives = 71/121 (58%), Gaps = 1/121 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 ++DESLHL+FGI +I + E+P L T F ++ + ++ A LE Y +P+ +G+ Sbjct: 214 LKDESLHLSFGIHLITALLEEHPELMTPAFAREVKGLILRAVELERDYNRALLPRPILGV 273 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A Y++++ +RR ++GL P F T NP WM+ +D+ + NFFE R Y+ A Sbjct: 274 SADYLNAYVEYVTDRRLDELGLGPHFG-TPNPAKWMATEVDVPEIVNFFEARNIHYEVAA 332 Query: 121 E 121 + Sbjct: 333 D 333 >gi|18311342|ref|NP_563276.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium perfringens str. 13] gi|110801267|ref|YP_697050.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium perfringens ATCC 13124] gi|168205189|ref|ZP_02631194.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium perfringens E str. JGS1987] gi|168210336|ref|ZP_02635961.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium perfringens B str. ATCC 3626] gi|168213271|ref|ZP_02638896.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium perfringens CPE str. F4969] gi|168216675|ref|ZP_02642300.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium perfringens NCTC 8239] gi|169347055|ref|ZP_02865997.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium perfringens C str. JGS1495] gi|182625797|ref|ZP_02953564.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium perfringens D str. JGS1721] gi|18146026|dbj|BAB82066.1| ribonucleoside-diphosphate reductase beta subunit [Clostridium perfringens str. 13] gi|110675914|gb|ABG84901.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium perfringens ATCC 13124] gi|169296738|gb|EDS78867.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium perfringens C str. JGS1495] gi|170663363|gb|EDT16046.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium perfringens E str. JGS1987] gi|170711548|gb|EDT23730.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium perfringens B str. ATCC 3626] gi|170715235|gb|EDT27417.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium perfringens CPE str. F4969] gi|177908953|gb|EDT71440.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium perfringens D str. JGS1721] gi|182381151|gb|EDT78630.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium perfringens NCTC 8239] Length = 344 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 46/123 (37%), Positives = 69/123 (56%), Gaps = 2/123 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I ++K E P ++TKE +++ R M+ EIA+ H + G+N Sbjct: 218 RDENTHLWLFRSIIKELKEEIPEVFTKELKEELREMVRTGVEHEIAWGHYVIGDNVTGIN 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 E+Y+++I N R IGLEPLF+ Y ENP PW+ D + K +FFE + T Y + Sbjct: 278 KNLIERYIKYIGNLRVKAIGLEPLFEGYNENPAPWVDYYADANQVKTDFFEAKSTAYAKA 337 Query: 120 AEL 122 L Sbjct: 338 GAL 340 >gi|21223593|ref|NP_629372.1| ribonucleotide-diphosphate reductase small chain [Streptomyces coelicolor A3(2)] gi|7328345|emb|CAB82486.1| class I ribonucleotide-diphosphate reductase small subunit chain [Streptomyces coelicolor A3(2)] gi|8546891|emb|CAB94610.1| ribonucleotide-diphosphate reductase small chain [Streptomyces coelicolor A3(2)] Length = 343 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 41/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F DV++ ++ E P L+ + +++ ML EA E+ +A + G G+N Sbjct: 217 RDETMHMSFAFDVVDTVRKEEPELFDDQLREQVTDMLREAVEAELQFARDLCGDGLPGMN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++ +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E Sbjct: 277 TDSMRQYLECVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 334 Query: 122 LKWD 125 D Sbjct: 335 GTVD 338 >gi|256785295|ref|ZP_05523726.1| ribonucleotide-diphosphate reductase small chain [Streptomyces lividans TK24] gi|289769189|ref|ZP_06528567.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces lividans TK24] gi|289699388|gb|EFD66817.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces lividans TK24] Length = 343 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 41/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F DV++ ++ E P L+ + +++ ML EA E+ +A + G G+N Sbjct: 217 RDETMHMSFAFDVVDTVRKEEPELFDDQLREQVTDMLREAVEAELQFARDLCGDGLPGMN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++ +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E Sbjct: 277 TDSMRQYLECVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 334 Query: 122 LKWD 125 D Sbjct: 335 GTVD 338 >gi|295836584|ref|ZP_06823517.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces sp. SPB74] gi|197697282|gb|EDY44215.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces sp. SPB74] Length = 345 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 72/120 (60%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F DV++ ++ E P L+ E +Q+ + ML A E+ +A + G G+N Sbjct: 219 RDETMHMSFAFDVVDTVRKEEPELFDAELEQEVKDMLDGAVNAELQFARDLCGDGLPGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S +Y+Q +A++R ++G P++ + NPF +M E+ +++ NFFE R + YQ E Sbjct: 279 TESMREYLQCVADQRLQRLGFAPVYG-SSNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 336 >gi|42523460|ref|NP_968840.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio bacteriovorus HD100] gi|39575666|emb|CAE79833.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio bacteriovorus HD100] Length = 336 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 71/119 (59%), Gaps = 2/119 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES+H+ F I+V+ + E P L+ ++ + ML +A E+ +AH+ + G GL+ Sbjct: 210 RDESMHMAFAIEVVKTARKEEPELFNQQMEDMVVQMLEDAIECEMEFAHDVLNLGVAGLS 269 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY+++ A++R + + P + +NPF +M E+ D+++ NFFE RV+ YQ G Sbjct: 270 AKDMRQYLEYCADQRLESLNIAPRYN-VKNPFIFM-ELQDMQELANFFERRVSAYQTGV 326 >gi|297192180|ref|ZP_06909578.1| ribonucleoside-diphosphate reductase subunit beta protein [Streptomyces pristinaespiralis ATCC 25486] gi|197720175|gb|EDY64083.1| ribonucleoside-diphosphate reductase subunit beta protein [Streptomyces pristinaespiralis ATCC 25486] Length = 340 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 73/120 (60%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+NF +V++ ++ E P L+ E +Q+ ML EA E+ + + +G G+N Sbjct: 214 RDETMHMNFAFEVVDTVRKEEPELFDDELRQQVTDMLKEAVEAELQFGRDLCGEGLPGMN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S +Y+Q +A++R ++G P++ ++NPF +M E+ +++ NFFE R + YQ E Sbjct: 274 TESMREYLQCVADQRLTRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 331 >gi|328884923|emb|CCA58162.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit [Streptomyces venezuelae ATCC 10712] Length = 338 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 41/124 (33%), Positives = 72/124 (58%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+NF +V++ ++ E P L+ +Q+ ML EA E+ + + G G+N Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPELFDDALRQQVTDMLKEAVEAELQFGRDLCGDGLPGMN 271 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S +Y+Q +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E Sbjct: 272 TESMREYLQCVADQRLQRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329 Query: 122 LKWD 125 D Sbjct: 330 GSVD 333 >gi|209966751|ref|YP_002299666.1| ribonucleotide-diphosphate reductase subunit beta [Rhodospirillum centenum SW] gi|209960217|gb|ACJ00854.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodospirillum centenum SW] Length = 322 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 47/131 (35%), Positives = 77/131 (58%), Gaps = 10/131 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55 +RDE+LH I + ENP +WT+ FQ++ T++H E +++A+ E P Sbjct: 191 VRDETLHTLSMIKLFRTFVNENPQVWTEAFQRELTVCCETIVHHEDAFIDLAF--EMGPV 248 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 G+ A ++Y+++IA+RR Q+GLEP+++ +NP PWM +++ + NFFE R TE Sbjct: 249 E--GMTAEDVKRYIRWIADRRLGQLGLEPVYRIEKNPLPWMDAILNGIEHTNFFENRATE 306 Query: 116 YQQGAEL-KWD 125 Y + A WD Sbjct: 307 YSKAATRGTWD 317 >gi|239944172|ref|ZP_04696109.1| putative ribonucleoside-diphosphate reductase small subunit [Streptomyces roseosporus NRRL 15998] gi|239990628|ref|ZP_04711292.1| putative ribonucleoside-diphosphate reductase small subunit [Streptomyces roseosporus NRRL 11379] gi|291447643|ref|ZP_06587033.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces roseosporus NRRL 15998] gi|291350590|gb|EFE77494.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces roseosporus NRRL 15998] Length = 338 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 71/120 (59%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+NF +V++ ++ E P L+ E QQ+ ML EA E+ + + +G G+N Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPDLFDDELQQQVTDMLKEAVEAELQFGRDLCGEGLPGMN 271 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++ +A++R ++G P +ENPF +M E+ +++ NFFE R + YQ E Sbjct: 272 TESMRQYLECVADQRLARLGF-PTVYGSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329 >gi|239929012|ref|ZP_04685965.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces ghanaensis ATCC 14672] Length = 339 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 41/124 (33%), Positives = 73/124 (58%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F DV++ ++ E P L+ + Q+ ML EA E+ +A + G G+N Sbjct: 213 RDETMHMSFAFDVVDTVRKEEPELFDERLGQQVTDMLREAVEAELQFARDLCGDGLPGMN 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++ +A++R ++G P++ ++NPF +M E+ +++ NFFE R + YQ E Sbjct: 273 TESMRQYLECVADQRLTRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 330 Query: 122 LKWD 125 D Sbjct: 331 GTVD 334 >gi|291437353|ref|ZP_06576743.1| ribonucleotide-diphosphate reductase small chain [Streptomyces ghanaensis ATCC 14672] gi|291340248|gb|EFE67204.1| ribonucleotide-diphosphate reductase small chain [Streptomyces ghanaensis ATCC 14672] Length = 340 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 41/124 (33%), Positives = 73/124 (58%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F DV++ ++ E P L+ + Q+ ML EA E+ +A + G G+N Sbjct: 214 RDETMHMSFAFDVVDTVRKEEPELFDERLGQQVTDMLREAVEAELQFARDLCGDGLPGMN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++ +A++R ++G P++ ++NPF +M E+ +++ NFFE R + YQ E Sbjct: 274 TESMRQYLECVADQRLTRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 331 Query: 122 LKWD 125 D Sbjct: 332 GTVD 335 >gi|114327552|ref|YP_744709.1| ribonucleotide-diphosphate reductase subunit beta [Granulibacter bethesdensis CGDNIH1] gi|114315726|gb|ABI61786.1| ribonucleoside-diphosphate reductase beta chain [Granulibacter bethesdensis CGDNIH1] Length = 339 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 74/127 (58%), Gaps = 9/127 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTML-----HEATLLEIAYAHETMPK 55 +RDE+LH I + + EN +WT++ +Q+ R + HE +++A+ ++ Sbjct: 209 VRDETLHCLSIIKLFHVFIDENREIWTEDLRQEIRQICATIVEHEDAFIDLAFELGSVE- 267 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 GL+A + Y+++IA+RR Q+GLEPLF NP PW+ ++++ + NFFE R TE Sbjct: 268 ---GLDAAQVKSYIRYIADRRLIQLGLEPLFHVERNPLPWIDDMLNAVEHANFFENRATE 324 Query: 116 YQQGAEL 122 Y + + + Sbjct: 325 YSRASTV 331 >gi|157964544|ref|YP_001499368.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia massiliae MTU5] gi|157844320|gb|ABV84821.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia massiliae MTU5] Length = 336 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 9/125 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55 +RDE+LH N I + ENP +WT+ +++ T++H E +E+A+ Sbjct: 190 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFE----VG 245 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 G GL A QY+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TE Sbjct: 246 GIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATE 305 Query: 116 YQQGA 120 Y + A Sbjct: 306 YSKAA 310 >gi|15892574|ref|NP_360288.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia conorii str. Malish 7] gi|34580440|ref|ZP_00141920.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia sibirica 246] gi|157828524|ref|YP_001494766.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933242|ref|YP_001650031.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia rickettsii str. Iowa] gi|229586746|ref|YP_002845247.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia africae ESF-5] gi|238650260|ref|YP_002916112.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia peacockii str. Rustic] gi|15619738|gb|AAL03189.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia conorii str. Malish 7] gi|28261825|gb|EAA25329.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia sibirica 246] gi|157801005|gb|ABV76258.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908329|gb|ABY72625.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia rickettsii str. Iowa] gi|228021796|gb|ACP53504.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia africae ESF-5] gi|238624358|gb|ACR47064.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia peacockii str. Rustic] Length = 328 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 9/125 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55 +RDE+LH N I + ENP +WT+ +++ T++H E +E+A+ Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFE----VG 244 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 G GL A QY+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TE Sbjct: 245 GIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRTTE 304 Query: 116 YQQGA 120 Y + A Sbjct: 305 YSKAA 309 >gi|157825769|ref|YP_001493489.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia akari str. Hartford] gi|157799727|gb|ABV74981.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia akari str. Hartford] Length = 327 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 9/125 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55 +RDE+LH N I + ENP +WT+ +++ T++H E +E+A+ Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFE----VG 244 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 G GL A QY+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TE Sbjct: 245 GIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATE 304 Query: 116 YQQGA 120 Y + A Sbjct: 305 YSKAA 309 >gi|282861024|ref|ZP_06270089.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. ACTE] gi|282563682|gb|EFB69219.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. ACTE] Length = 340 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 41/120 (34%), Positives = 71/120 (59%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+NF +V++ ++ E P L+ QQ+ ML EA E+ + + +G G+N Sbjct: 214 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLREAVEAELQFGRDLCGEGLPGMN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++ +A++R ++G L+ +ENPF +M E+ +++ NFFE R + YQ E Sbjct: 274 TESMRQYLECVADQRLTRLGFPALYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 331 >gi|157803769|ref|YP_001492318.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia canadensis str. McKiel] gi|157785032|gb|ABV73533.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia canadensis str. McKiel] Length = 324 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 9/125 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55 +RDE+LH N I + ENP +WT+ +++ T++H E +E+A+ Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYGACTTIVHFEDAFIELAFE----VG 244 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 G GL A QY+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TE Sbjct: 245 GIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATE 304 Query: 116 YQQGA 120 Y + A Sbjct: 305 YSKAA 309 >gi|31322342|gb|AAP15464.1| ribonucleotide reductase small subunit [Rickettsia rickettsii str. 'Sheila Smith'] Length = 336 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 9/125 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55 +RDE+LH N I + ENP +WT+ +++ T++H E +E+A+ Sbjct: 197 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFE----VG 252 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 G GL A QY+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TE Sbjct: 253 GIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRTTE 312 Query: 116 YQQGA 120 Y + A Sbjct: 313 YSKAA 317 >gi|67459102|ref|YP_246726.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia felis URRWXCal2] gi|67004635|gb|AAY61561.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia felis URRWXCal2] Length = 327 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 9/125 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55 +RDE+LH N I + ENP +WT+ +++ T++H E +E+A+ Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFE----VG 244 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 G GL A QY+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TE Sbjct: 245 GIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATE 304 Query: 116 YQQGA 120 Y + A Sbjct: 305 YSKAA 309 >gi|15604372|ref|NP_220888.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia prowazekii str. Madrid E] gi|51473694|ref|YP_067451.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia typhi str. Wilmington] gi|3861064|emb|CAA14964.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN (nrdB) [Rickettsia prowazekii] gi|51460006|gb|AAU03969.1| Ribonucleotide reductase [Rickettsia typhi str. Wilmington] gi|292572126|gb|ADE30041.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia prowazekii Rp22] Length = 324 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 9/125 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55 +RDE+LH N I + ENP +WT+ +++ T++H E +E+A+ Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFE----VG 244 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 G GL A QY+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TE Sbjct: 245 GIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATE 304 Query: 116 YQQGA 120 Y + A Sbjct: 305 YSKAA 309 >gi|320008647|gb|ADW03497.1| Ribonucleoside-diphosphate reductase [Streptomyces flavogriseus ATCC 33331] Length = 338 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 41/120 (34%), Positives = 71/120 (59%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+NF +V++ ++ E P L+ E +Q+ ML EA E+ + + G G+N Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPDLFDDELRQQVTDMLKEAVEAELQFGRDLCGDGLPGMN 271 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++ +A++R ++G L+ +ENPF +M E+ +++ NFFE R + YQ E Sbjct: 272 TESMRQYLECVADQRLTRLGFPALYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329 >gi|320107274|ref|YP_004182864.1| Ribonucleoside-diphosphate reductase [Terriglobus saanensis SP1PR4] gi|319925795|gb|ADV82870.1| Ribonucleoside-diphosphate reductase [Terriglobus saanensis SP1PR4] Length = 346 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 67/119 (56%), Gaps = 2/119 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES HL F +V+ ++ + P LW E +++ M+ EA E +A + + G GL+ Sbjct: 220 RDESAHLEFAFEVVQVVRAQEPDLWDTELERQVVVMMEEAIDAEAQFAEDLLSGGVAGLS 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY+ ++A+ R ++G+ F +NPF +M E+ D+++ NFFE RV+ YQ Sbjct: 280 VRDMRQYLGYVADSRLERLGIGAHFN-AKNPFSFM-ELQDVQELTNFFERRVSAYQTAV 336 >gi|254384639|ref|ZP_04999978.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces sp. Mg1] gi|194343523|gb|EDX24489.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces sp. Mg1] Length = 338 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+NF +V++ ++ E P L+ QQ+ ML EA E+ + + G G+N Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLKEAVDAELQFGRDLCGDGLPGMN 271 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S +Y++ +A++R ++G P++ ++NPF +M E+ +++ NFFE R + YQ E Sbjct: 272 TESMREYLECVADQRLVRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329 Query: 122 LKWD 125 D Sbjct: 330 GTVD 333 >gi|182436093|ref|YP_001823812.1| putative ribonucleoside-diphosphate reductase small subunit [Streptomyces griseus subsp. griseus NBRC 13350] gi|326776718|ref|ZP_08235983.1| Ribonucleoside-diphosphate reductase [Streptomyces cf. griseus XylebKG-1] gi|178464609|dbj|BAG19129.1| putative ribonucleoside-diphosphate reductase small subunit [Streptomyces griseus subsp. griseus NBRC 13350] gi|326657051|gb|EGE41897.1| Ribonucleoside-diphosphate reductase [Streptomyces cf. griseus XylebKG-1] Length = 338 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 41/120 (34%), Positives = 70/120 (58%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+NF +V++ ++ E P L+ QQ+ ML EA E+ + + +G G+N Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPDLFDDALQQQVTDMLKEAVEAELQFGRDLCGEGLPGMN 271 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++ +A++R ++G P +ENPF +M E+ +++ NFFE R + YQ E Sbjct: 272 TESMRQYLECVADQRLARLGF-PTVYGSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329 >gi|302536805|ref|ZP_07289147.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces sp. C] gi|302445700|gb|EFL17516.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces sp. C] Length = 356 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+NF +V++ ++ E P L+ QQ+ ML EA E+ + + G G+N Sbjct: 230 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLKEAVEAELQFGRDLCGDGLPGMN 289 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S +Y++ +A++R ++G P++ ++NPF +M E+ +++ NFFE R + YQ E Sbjct: 290 TDSMREYLECVADQRLVRLGFPPVYG-SQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 347 Query: 122 LKWD 125 D Sbjct: 348 GTVD 351 >gi|311898297|dbj|BAJ30705.1| putative ribonucleoside-diphosphate reductase subunit beta [Kitasatospora setae KM-6054] Length = 339 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 41/120 (34%), Positives = 73/120 (60%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES+H++F V++ ++ E P L+ + ++ ML EA E+ +A + +G G+N Sbjct: 213 RDESMHMDFAFSVVDTVREEEPDLFDDKMARQVTEMLEEAVEAELQFARDLCGEGLPGMN 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S +Y+Q +A++R ++GL P+ + NPF +M E+ ++++ NFFE RV+ YQ E Sbjct: 273 TESMREYLQAVADQRLARLGL-PIRYGSTNPFGFM-ELQNVQELTNFFERRVSAYQIAVE 330 >gi|296536499|ref|ZP_06898590.1| ribonucleotide-diphosphate reductase subunit beta [Roseomonas cervicalis ATCC 49957] gi|296263178|gb|EFH09712.1| ribonucleotide-diphosphate reductase subunit beta [Roseomonas cervicalis ATCC 49957] Length = 343 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 9/125 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK-----SRTMLHEATLLEIAYAHETMPK 55 +RDE+LH I + ENP +WT++ + + + HE +++A+ Sbjct: 198 VRDETLHCLSVIRLFRTFIQENPEIWTEQLKADLVEICTTIVEHEDAFIDLAFEL----G 253 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 G G+ +QY++FIA+RR Q+GLEP + +NP PW+ E+++ + NFFE R TE Sbjct: 254 GVQGMEPEDVKQYIRFIADRRLQQLGLEPHYGTEKNPLPWLDEILNAVEHMNFFEGRATE 313 Query: 116 YQQGA 120 Y + + Sbjct: 314 YSKAS 318 >gi|56416698|ref|YP_153772.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma marginale str. St. Maries] gi|254994906|ref|ZP_05277096.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma marginale str. Mississippi] gi|255003042|ref|ZP_05278006.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma marginale str. Puerto Rico] gi|255004164|ref|ZP_05278965.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma marginale str. Virginia] gi|56387930|gb|AAV86517.1| ribonuceoside-diphosphate reductase beta chain [Anaplasma marginale str. St. Maries] Length = 324 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60 RDE+LH I + N EN +W + +++ LE + G V GL Sbjct: 193 RDETLHTESIIRLFNTFIHENQEIWDENLREELYGACRVIVSLEDEFIDLAFALGDVEGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A ++Y+++IANRR Q+ LEP++ NP PW+ E+++ + NFFE RVTEY + A Sbjct: 253 SAAEVKRYIRYIANRRLKQLDLEPIYGDNVNPLPWLDEILNGVEHTNFFENRVTEYSRAA 312 Query: 121 -ELKWD 125 E WD Sbjct: 313 TEGTWD 318 >gi|222475064|ref|YP_002563479.1| ribonuceoside-diphosphate reductase beta chain (nrdB) [Anaplasma marginale str. Florida] gi|222419200|gb|ACM49223.1| ribonuceoside-diphosphate reductase beta chain (nrdB) [Anaplasma marginale str. Florida] Length = 343 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60 RDE+LH I + N EN +W + +++ LE + G V GL Sbjct: 212 RDETLHTESIIRLFNTFIHENQEIWDENLREELYGACRVIVSLEDEFIDLAFALGDVEGL 271 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A ++Y+++IANRR Q+ LEP++ NP PW+ E+++ + NFFE RVTEY + A Sbjct: 272 SAAEVKRYIRYIANRRLKQLDLEPIYGDNVNPLPWLDEILNGVEHTNFFENRVTEYSRAA 331 Query: 121 -ELKWD 125 E WD Sbjct: 332 TEGTWD 337 >gi|154250961|ref|YP_001411785.1| ribonucleotide-diphosphate reductase subunit beta [Parvibaculum lavamentivorans DS-1] gi|154154911|gb|ABS62128.1| Ribonucleoside-diphosphate reductase [Parvibaculum lavamentivorans DS-1] Length = 319 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 73/124 (58%), Gaps = 9/124 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQ----QKSRTMLH-EATLLEIAYAHETMPKG 56 RDE+LH + + ENP +WT+E + + T++H E +++A+ ++ Sbjct: 190 RDETLHTVSAMKLFRTFVDENPEIWTEELRRDIYKACETIIHHEDAFIDLAFEMGSIE-- 247 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 GL+A + Y+++IA+RR Q+ L+P+++ +NP PWM E+++ + NFFE R TEY Sbjct: 248 --GLSAQEVKNYIRYIADRRLVQLNLQPIYRTEKNPLPWMDEMLNGIEHTNFFENRATEY 305 Query: 117 QQGA 120 + + Sbjct: 306 SKAS 309 >gi|271967540|ref|YP_003341736.1| ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM 43021] gi|270510715|gb|ACZ88993.1| Ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM 43021] Length = 331 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 69/120 (57%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES+H+ F V++ ++ E P L+ + + M+ EA E+A+A + G G+N Sbjct: 205 RDESMHMEFAFSVVDTVRAEEPDLFDDKLGAQVTQMIEEAVEAELAFAADLCGDGMSGMN 264 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++++A++R ++ P+ T NPF +M E+ D+++ NFFE RV+ YQ E Sbjct: 265 VEQMRQYLEYVADQRLVRLRF-PVRYGTANPFAFM-ELQDVQELANFFERRVSAYQVAVE 322 >gi|269958883|ref|YP_003328672.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma centrale str. Israel] gi|269848714|gb|ACZ49358.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma centrale str. Israel] Length = 332 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 10/130 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV--- 58 RDE+LH I + N EN +W R L+ A + ++ E + F Sbjct: 201 RDETLHTESIIRLFNTFIHENQEIWDANL----RAELYGACRVIVSLEDEFIDLAFALGD 256 Query: 59 --GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 GL+A ++Y+++IANRR Q+ LEP++ NP PW+ E+++ + NFFE RVTEY Sbjct: 257 VEGLSASEVKRYIRYIANRRLKQLDLEPIYGDNVNPLPWLDEILNGVEHTNFFENRVTEY 316 Query: 117 QQGA-ELKWD 125 + A E WD Sbjct: 317 SRAATEGTWD 326 >gi|115378653|ref|ZP_01465803.1| ribonucleoside-diphosphate reductase, beta subunit [Stigmatella aurantiaca DW4/3-1] gi|115364319|gb|EAU63404.1| ribonucleoside-diphosphate reductase, beta subunit [Stigmatella aurantiaca DW4/3-1] Length = 288 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 2/116 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES H+ F + I + E P L+ Q M+ EA E +A + + G GL+ Sbjct: 158 RDESTHMAFAFEAIRVARQEEPDLFDARMQADVVAMMREAVECETLFAQDLLSGGVAGLS 217 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 QY++++A++R +GL P+F+ +N P+M ++ D+++ NFFE RV+ YQ Sbjct: 218 VQEMRQYLEYVADQRLTMLGLAPVFR-VKNSLPFM-DLQDVQELTNFFERRVSAYQ 271 >gi|156087150|ref|XP_001610982.1| ribonucleoside-diphosphate reductase small subunit [Babesia bovis T2Bo] gi|154798235|gb|EDO07414.1| ribonucleoside-diphosphate reductase small subunit, putative [Babesia bovis] Length = 339 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 41/121 (33%), Positives = 73/121 (60%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +FG + +++K + P + + ++ EA +E + +++P +G+N Sbjct: 214 RDEGLHADFGCFIYSKLKHKLP-------AECVQQIIKEAVAVERVFVCDSLPTDLIGMN 266 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G+ P++K T+NPF WM E+I ++ + NFFE RV EYQ+ Sbjct: 267 SMLMAQYIEFVADRLLQALGVPPVYK-TKNPFEWM-ELISVQGKTNFFEKRVGEYQKSGI 324 Query: 122 L 122 L Sbjct: 325 L 325 >gi|302521843|ref|ZP_07274185.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces sp. SPB78] gi|302430738|gb|EFL02554.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces sp. SPB78] Length = 345 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 71/120 (59%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F DV++ ++ E P L+ + + + + ML A E+ +A + G G+N Sbjct: 219 RDETMHMSFAFDVVDTVRKEEPELFDDKLEAEVKEMLAGAVDAELQFARDLCGDGLPGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S +Y+Q +A++R ++G P++ + NPF +M E+ +++ NFFE R + YQ E Sbjct: 279 TESMREYLQCVADQRLVRLGFSPVYG-SSNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 336 >gi|149916691|ref|ZP_01905193.1| putative ribonucleoside-diphosphate reductase beta chain [Plesiocystis pacifica SIR-1] gi|149822408|gb|EDM81797.1| putative ribonucleoside-diphosphate reductase beta chain [Plesiocystis pacifica SIR-1] Length = 356 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES H+ F VI+ ++ + P L+ E + M+ EA E+A+A + + G GL Sbjct: 230 RDESAHMAFAFSVIDVVRDQEPELFDAELEAAVVEMIEEAVACEVAFAEDLLGLGVAGLT 289 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 Y+++ A++R ++G+ + T NP +M E+ D+ + NFFE RV+ YQ G Sbjct: 290 VADLRAYLEYCADQRLQRLGMATRYGST-NPLSFM-ELQDIPELANFFERRVSAYQHGVS 347 Query: 122 LKWD 125 D Sbjct: 348 GTID 351 >gi|91205547|ref|YP_537902.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia bellii RML369-C] gi|91069091|gb|ABE04813.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia bellii RML369-C] Length = 324 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 44/124 (35%), Positives = 67/124 (54%), Gaps = 7/124 (5%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLHEATLLEIAYAHETMPKG 56 +RDE+LH N I + ENP +WT+ + + T++H IA A E G Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTENLRSRIYKACTTIVHFEDAF-IALAFEV--GG 245 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 GL A Y+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TEY Sbjct: 246 IEGLTADEVRLYIRYIADRRLFQLGLKDIYMVKNNPLPWLDEMLNGVEHTNFFENRATEY 305 Query: 117 QQGA 120 + A Sbjct: 306 SKAA 309 >gi|157827263|ref|YP_001496327.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia bellii OSU 85-389] gi|157802567|gb|ABV79290.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia bellii OSU 85-389] Length = 324 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 44/124 (35%), Positives = 67/124 (54%), Gaps = 7/124 (5%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLHEATLLEIAYAHETMPKG 56 +RDE+LH N I + ENP +WT+ + + T++H IA A E G Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTENLRSRIYKACTTIVHFEDAF-IALAFEV--GG 245 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 GL A Y+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TEY Sbjct: 246 IEGLTADEVRLYIRYIADRRLFQLGLKDIYMVKNNPLPWLDEMLNGVEHTNFFENRATEY 305 Query: 117 QQGA 120 + A Sbjct: 306 SKAA 309 >gi|318060206|ref|ZP_07978929.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SA3_actG] gi|318077113|ref|ZP_07984445.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SA3_actF] gi|333024515|ref|ZP_08452579.1| putative ribonucleoside-diphosphate reductase beta chain [Streptomyces sp. Tu6071] gi|332744367|gb|EGJ74808.1| putative ribonucleoside-diphosphate reductase beta chain [Streptomyces sp. Tu6071] Length = 345 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 71/120 (59%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F DV++ ++ E P L+ + + + + ML A E+ +A + G G+N Sbjct: 219 RDETMHMSFAFDVVDTVRKEEPELFDDKLEAEVKEMLAGAVDAELQFARDLCGDGLPGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S +Y+Q +A++R ++G P++ + NPF +M E+ +++ NFFE R + YQ E Sbjct: 279 TESMREYLQCVADQRLVRLGFSPVYG-SSNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 336 >gi|310823070|ref|YP_003955428.1| ribonucleoside-diphosphate reductase subunit beta [Stigmatella aurantiaca DW4/3-1] gi|309396142|gb|ADO73601.1| Ribonucleoside-diphosphate reductase, beta subunit [Stigmatella aurantiaca DW4/3-1] Length = 336 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 2/116 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES H+ F + I + E P L+ Q M+ EA E +A + + G GL+ Sbjct: 206 RDESTHMAFAFEAIRVARQEEPDLFDARMQADVVAMMREAVECETLFAQDLLSGGVAGLS 265 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 QY++++A++R +GL P+F+ +N P+M ++ D+++ NFFE RV+ YQ Sbjct: 266 VQEMRQYLEYVADQRLTMLGLAPVFR-VKNSLPFM-DLQDVQELTNFFERRVSAYQ 319 >gi|290957506|ref|YP_003488688.1| ribonucleotide-diphosphate reductase small chain [Streptomyces scabiei 87.22] gi|260647032|emb|CBG70131.1| ribonucleotide-diphosphate reductase small chain [Streptomyces scabiei 87.22] Length = 355 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 73/124 (58%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F +V++ ++ E P L+ + +Q+ ML EA E+ + + G G+N Sbjct: 229 RDETMHMSFAFEVVDTVRKEEPELFDELLRQQVTDMLKEAVEAELQFGRDLCGDGLPGMN 288 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++ +A++R ++G P++ ++NPF +M E+ +++ NFFE R + YQ E Sbjct: 289 TESMRQYLECVADQRLTRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 346 Query: 122 LKWD 125 D Sbjct: 347 GTVD 350 >gi|11544904|emb|CAC17630.1| class I ribonucleotide-diphosphate reductase small subunit chain [Streptomyces jumonjinensis] Length = 322 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 67/111 (60%), Gaps = 2/111 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+NF +V++ ++ E P L+ QQ+ ML EA E+ + + G G+N Sbjct: 213 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLQEAVEAELQFGSDLCGDGLPGMN 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 112 S +Y+Q +A++R ++G P++ +ENPF +M E+ +++ NFFE R Sbjct: 273 TESMREYLQCVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERR 321 >gi|238023979|ref|YP_002908211.1| Ribonucleotide reductase subunit beta [Burkholderia glumae BGR1] gi|237878644|gb|ACR30976.1| Ribonucleotide reductase, beta subunit [Burkholderia glumae BGR1] Length = 337 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 55/125 (44%), Positives = 71/125 (56%), Gaps = 5/125 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDE LH FGI VI Q+ +E HL + + + EA E AYA + +G Sbjct: 216 MRDEVLHCGFGIRVIRQL-LEEEHL--RLDPHAVQQIWEEAEAAERAYAQYILRDPILGY 272 Query: 61 NAP-SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +A CEQ+ +FIANRR Q+ + F N PW+ E +L+KEKNFFETRVT+YQ G Sbjct: 273 SAELHCEQF-RFIANRRATQLSMPAPFPGATNALPWLDEQANLRKEKNFFETRVTDYQSG 331 Query: 120 AELKW 124 L W Sbjct: 332 GALDW 336 >gi|325119319|emb|CBZ54873.1| hypothetical protein NCLIV_052980 [Neospora caninum Liverpool] Length = 392 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +Q+K + P + + M+ EA +E A+ E +P +G+N Sbjct: 267 RDEGLHADFACLLYSQLKNKLP-------DKVVQDMVREAVTVERAFICEALPVDLIGMN 319 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 S QY++F+A+R +G+ +F + NPF WM E+I L+ + NFFE RV EYQ+ Sbjct: 320 NRSMAQYIEFVADRLLTSLGVPKIF-FATNPFDWM-ELISLQGKTNFFEKRVGEYQKAG 376 >gi|221480670|gb|EEE19110.1| ribonucleotide-diphosphate reductase, small subunit, putative [Toxoplasma gondii GT1] Length = 391 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +Q+K + P + + M+ EA +E A+ E +P +G+N Sbjct: 266 RDEGLHADFACLLYSQLKHKLP-------DKVVQDMVREAVTVERAFICEALPVDLIGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 S QY++F+A+R +G+ +F + NPF WM E+I L+ + NFFE RV EYQ+ Sbjct: 319 NRSMAQYIEFVADRLLTSLGVPKIF-FATNPFDWM-ELISLQGKTNFFEKRVGEYQKAG 375 >gi|237845387|ref|XP_002371991.1| ribonucleotide-diphosphate reductase, small subunit, putative [Toxoplasma gondii ME49] gi|211969655|gb|EEB04851.1| ribonucleotide-diphosphate reductase, small subunit, putative [Toxoplasma gondii ME49] gi|221501644|gb|EEE27410.1| ribonucleotide-diphosphate reductase, small subunit, putative [Toxoplasma gondii VEG] Length = 391 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +Q+K + P + + M+ EA +E A+ E +P +G+N Sbjct: 266 RDEGLHADFACLLYSQLKHKLP-------DKVVQDMVREAVTVERAFICEALPVDLIGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 S QY++F+A+R +G+ +F + NPF WM E+I L+ + NFFE RV EYQ+ Sbjct: 319 NRSMAQYIEFVADRLLTSLGVPKIF-FATNPFDWM-ELISLQGKTNFFEKRVGEYQKAG 375 >gi|840719|emb|CAA54549.1| ribonucleotide reductase R2 [Arabidopsis thaliana] Length = 340 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F +I+ +++ P +K ++HEA +E + + +P +G+N Sbjct: 211 RDEGLHCDFACLLISLLQLHVP-------LEKVYQIVHEAVEIETEFVCKALPCDLIGMN 263 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY+QF+A+R +G E +K ENPF WM E I L+ + NFFE RV EYQ+ + Sbjct: 264 SNLMSQYIQFVADRLLVTLGCERTYK-AENPFDWM-EFISLQGKTNFFEKRVGEYQKAS 320 >gi|190572323|ref|YP_001970168.1| putative ribonucleotide diphosphate reductase, small chain [Stenotrophomonas maltophilia K279a] gi|190010245|emb|CAQ43853.1| putative ribonucleotide diphosphate reductase, small chain [Stenotrophomonas maltophilia K279a] Length = 339 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 69/120 (57%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES H+ F + + ++ E P L+ +E +Q+ ML EA E+ +A + + G G++ Sbjct: 213 RDESAHMEFAFESVRVVREEEPDLFDEEMKQQVYDMLAEAIECEVQFAEDVLSGGVAGIS 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY+Q A++ ++G+E + NP P+M E+ D+++ NFFE RV+ YQ G + Sbjct: 273 TRDMRQYLQHCADQHFAKLGMEKKYN-VRNPLPFM-ELQDVQELTNFFERRVSAYQVGVQ 330 >gi|11544907|emb|CAC17632.1| class I ribonucleotide-diphosphate reductase small chain [Streptomyces microflavus] Length = 321 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 68/111 (61%), Gaps = 2/111 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+NF +V++ ++ E P L+ Q++ ML EA E+ + + +G G+N Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPELFDDALQEQVTAMLKEAVEAELQFGRDLCGEGLPGMN 271 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 112 S +Y+Q +A++R ++G P++ +ENPF +M E+ +++ NFFE R Sbjct: 272 TESMREYLQCVADQRLTRLGFAPVYG-SENPFAFM-ELQGVQELTNFFERR 320 >gi|254521240|ref|ZP_05133295.1| ribonucleoside-diphosphate reductase, beta subunit [Stenotrophomonas sp. SKA14] gi|219718831|gb|EED37356.1| ribonucleoside-diphosphate reductase, beta subunit [Stenotrophomonas sp. SKA14] Length = 339 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 68/120 (56%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES H+ F + + ++ E P L+ E +Q+ ML EA E+ +A + + G G++ Sbjct: 213 RDESAHMEFAFESVRVVREEEPDLFDDEMKQQVYDMLAEAIECEVQFAEDVLSGGVAGIS 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY+Q A++ ++G+E + NP P+M E+ D+++ NFFE RV+ YQ G + Sbjct: 273 TRDMRQYLQHCADQHFAKLGMEKKYN-VRNPLPFM-ELQDVQELTNFFERRVSAYQVGVQ 330 >gi|68171256|ref|ZP_00544659.1| Ribonucleoside-diphosphate reductase [Ehrlichia chaffeensis str. Sapulpa] gi|67999338|gb|EAM85984.1| Ribonucleoside-diphosphate reductase [Ehrlichia chaffeensis str. Sapulpa] Length = 294 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 9/125 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58 +RDE+LH I + N EN +W +Q+ L+EA + ++ E + F Sbjct: 162 VRDETLHTESIIRLFNTFIQENYEIWDDSLKQE----LYEACRIIVSLEDEFINLAFACG 217 Query: 59 ---GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 GL++ ++Y+++IANRR Q+ LEP++ +NP W+ E+++ + NFFE RVTE Sbjct: 218 DVEGLSSKEVKEYIRYIANRRLLQLNLEPIYDTNKNPLLWLDEILNGVEHTNFFENRVTE 277 Query: 116 YQQGA 120 Y + A Sbjct: 278 YARAA 282 >gi|88658048|ref|YP_507564.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia chaffeensis str. Arkansas] gi|88599505|gb|ABD44974.1| ribonucleoside-diphosphate reductase, beta subunit [Ehrlichia chaffeensis str. Arkansas] Length = 324 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 9/125 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58 +RDE+LH I + N EN +W +Q+ L+EA + ++ E + F Sbjct: 192 VRDETLHTESIIRLFNTFIQENYEIWDDSLKQE----LYEACRIIVSLEDEFINLAFACG 247 Query: 59 ---GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 GL++ ++Y+++IANRR Q+ LEP++ +NP W+ E+++ + NFFE RVTE Sbjct: 248 DVEGLSSKEVKEYIRYIANRRLLQLNLEPIYDTNKNPLLWLDEILNGVEHTNFFENRVTE 307 Query: 116 YQQGA 120 Y + A Sbjct: 308 YARAA 312 >gi|58040422|ref|YP_192386.1| ribonucleotide-diphosphate reductase subunit beta [Gluconobacter oxydans 621H] gi|58002836|gb|AAW61730.1| Ribonucleoside-diphosphate reductase beta chain [Gluconobacter oxydans 621H] Length = 339 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 68/121 (56%), Gaps = 1/121 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDE+LH I + EN +WT EF+++ + E A+ G V G Sbjct: 204 VRDETLHCLSMIRLFRTFVRENSEIWTPEFREELTQICRTTVEHEDAFIDLCFEMGPVEG 263 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +++ ++Y++FIA+RR Q+GL+P++ NP PW+ ++++ + NFFE R TEY + Sbjct: 264 MSSEDVKRYIRFIADRRLTQLGLDPVYGQESNPLPWIDDMLNAVEHANFFENRSTEYSRA 323 Query: 120 A 120 + Sbjct: 324 S 324 >gi|57239055|ref|YP_180191.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia ruminantium str. Welgevonden] gi|15811135|gb|AAL08816.1|AF308664_1 hypothetical ribonucleoside reductase beta chain [Ehrlichia ruminantium] gi|57161134|emb|CAH58047.1| putative ribonucleoside-diphosphate reductase beta chain [Ehrlichia ruminantium str. Welgevonden] Length = 324 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 9/125 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58 +RDE+LH I + N EN +W + +++ L+EA + + E + F Sbjct: 192 VRDETLHTESIIRLFNTFIQENYEIWDDDLKKE----LYEACSVIVTLEDEFINLAFACG 247 Query: 59 ---GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 GL+A ++Y+++IANRR Q+ LEP++ +NP W+ E+++ + NFFE RVTE Sbjct: 248 DVEGLSAQEVKEYIRYIANRRLIQLNLEPIYSANKNPLLWLDEILNGVEHTNFFENRVTE 307 Query: 116 YQQGA 120 Y + A Sbjct: 308 YTRAA 312 >gi|58578998|ref|YP_197210.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia ruminantium str. Welgevonden] gi|58417624|emb|CAI26828.1| Ribonucleoside-diphosphate reductase beta chain [Ehrlichia ruminantium str. Welgevonden] Length = 329 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 9/125 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58 +RDE+LH I + N EN +W + +++ L+EA + + E + F Sbjct: 197 VRDETLHTESIIRLFNTFIQENYEIWDDDLKKE----LYEACSVIVTLEDEFINLAFACG 252 Query: 59 ---GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 GL+A ++Y+++IANRR Q+ LEP++ +NP W+ E+++ + NFFE RVTE Sbjct: 253 DVEGLSAQEVKEYIRYIANRRLIQLNLEPIYSANKNPLLWLDEILNGVEHTNFFENRVTE 312 Query: 116 YQQGA 120 Y + A Sbjct: 313 YTRAA 317 >gi|187932511|ref|YP_001884520.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium botulinum B str. Eklund 17B] gi|187720664|gb|ACD21885.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum B str. Eklund 17B] Length = 344 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 2/123 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I +++ ENP +T + + + R M+H EI + H + G+N Sbjct: 218 RDENTHLWLFRNIIKELQSENPESFTADLKNELREMMHIGVENEILWGHYVIGDKIQGIN 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 E Y++++ N+R +IGLEPLF Y ENP W+ V + K +FFE + T Y + Sbjct: 278 KKLIEDYIKYLGNKRLKEIGLEPLFSGYEENPATWVDVVANSNSVKTDFFEAKSTAYAKV 337 Query: 120 AEL 122 + L Sbjct: 338 STL 340 >gi|194363985|ref|YP_002026595.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia R551-3] gi|194346789|gb|ACF49912.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia R551-3] Length = 339 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES H++F + ++ I+ E P L+ + +Q ML EA E+ +A + + G G++ Sbjct: 213 RDESAHMDFAFECVDVIREEEPDLFDDKMKQDVYDMLAEAIECEVQFAEDVLSGGVAGIS 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY+Q A+ H++G+E + NP +M E+ D+++ NFFE R + YQ G + Sbjct: 273 TRDMRQYLQHCADNHFHRLGMERKYN-VRNPLSFM-ELQDVQELTNFFERRASAYQVGVQ 330 >gi|73666936|ref|YP_302952.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia canis str. Jake] gi|72394077|gb|AAZ68354.1| Ribonucleoside-diphosphate reductase [Ehrlichia canis str. Jake] Length = 324 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 9/125 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58 +RDE+LH I + N EN +W + + L+EA + ++ E + F Sbjct: 192 VRDETLHTESIIRLFNTFVQENYEIWDDSLKHE----LYEACKIIVSLEDEFINLAFACG 247 Query: 59 ---GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 GL+A ++Y+++IANRR Q+ LEP++ +NP W+ E+++ + NFFE RVTE Sbjct: 248 DVEGLSAKEVKKYIRYIANRRLLQLNLEPIYDANKNPLLWLDEILNGVEHTNFFENRVTE 307 Query: 116 YQQGA 120 Y + A Sbjct: 308 YARAA 312 >gi|58617056|ref|YP_196255.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia ruminantium str. Gardel] gi|58416668|emb|CAI27781.1| Ribonucleoside-diphosphate reductase beta chain [Ehrlichia ruminantium str. Gardel] Length = 329 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 9/125 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58 +RDE+LH I + N EN +W + +++ L+EA + + E + F Sbjct: 197 VRDETLHTESIIRLFNTFIQENYEIWDGDLKKE----LYEACSVIVTLEDEFINLAFACG 252 Query: 59 ---GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 GL+A ++Y+++IANRR Q+ LEP++ +NP W+ E+++ + NFFE RVTE Sbjct: 253 DVEGLSAQEVKEYIRYIANRRLIQLNLEPIYSANKNPLLWLDEILNGVEHTNFFENRVTE 312 Query: 116 YQQGA 120 Y + A Sbjct: 313 YTRAA 317 >gi|108763495|ref|YP_633213.1| ribonucleoside-diphosphate reductase subunit beta [Myxococcus xanthus DK 1622] gi|108467375|gb|ABF92560.1| ribonucleoside-diphosphate reductase, beta subunit [Myxococcus xanthus DK 1622] Length = 349 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 67/116 (57%), Gaps = 2/116 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES H+ F + I + E P L+ + ++ ML EA E +A + + G +GL+ Sbjct: 219 RDESAHMAFAFESIQVARKEEPDLFDAQMERDVVAMLREAVECETQFAQDLLSGGVMGLS 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 Y++++A++R +G+ P+F T+NP +M ++ D+++ NFFE RV+ YQ Sbjct: 279 VQDMRGYLEYVADQRLQMLGMTPVFG-TKNPLHFM-DLQDVQELTNFFERRVSSYQ 332 >gi|291303011|ref|YP_003514289.1| Ribonucleoside-diphosphate reductase [Stackebrandtia nassauensis DSM 44728] gi|290572231|gb|ADD45196.1| Ribonucleoside-diphosphate reductase [Stackebrandtia nassauensis DSM 44728] Length = 338 Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 2/116 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES H+NF V++ ++ E P L+ E + M+ EA E+ +A + +G G+ Sbjct: 212 RDESCHMNFAFSVVDVVRNEEPELFDDELTEAVTRMIEEAVAAELQFARDLCGEGMPGMT 271 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + Y++++A++R ++G+ P+ ++NPF +M+ + D+++ NFFE R T YQ Sbjct: 272 VNDMKSYLEYVADQRLTRLGM-PVRYGSKNPFGFMA-LQDVQELTNFFERRPTAYQ 325 >gi|225432510|ref|XP_002279943.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 340 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ + P W QK ++HEA +E + E +P +G+N Sbjct: 212 RDEGLHCDFACLLYSLLQKQLP--W-----QKVHHIVHEAVEIETQFVCEALPCALIGMN 264 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G E + ENPF WM E I L+ + NFFE RV +YQ+ + Sbjct: 265 ATLMSQYIKFVADRLLVALGYERKYN-VENPFDWM-EFISLQGKANFFERRVGDYQKAS 321 >gi|226950223|ref|YP_002805314.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum A2 str. Kyoto] gi|226843961|gb|ACO86627.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum A2 str. Kyoto] Length = 342 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 70/126 (55%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I ++K ENPH++T+E +++ R M+ EI + +GLN Sbjct: 214 RDEVTHLVLFQNIIKELKNENPHIFTEELEEEFRQMMRIGVEHEIQWGQYVTNNEILGLN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 E+Y+++++N R IGL+PL+ + ++P W+ L K +FFE +VT Y + Sbjct: 274 DELIEKYIKYLSNLRLVAIGLKPLYLEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|224000239|ref|XP_002289792.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220975000|gb|EED93329.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 335 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 73/119 (61%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +++K+ K Q++ +T+++EA +E ++ + +P +G+N Sbjct: 197 RDEGLHCSFACQLYSKLKL-------KLSQEEIQTIINEAVDVEKSFICDALPVSLIGMN 249 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G + ++ ++NPF WM ++I L+ + NFFE RV EYQ+ Sbjct: 250 SRLMAQYIEFVADRMLTDLGYQAMYG-SKNPFDWM-DMISLEGKTNFFEKRVGEYQKSG 306 >gi|162452149|ref|YP_001614516.1| ribonucleotide-diphosphate reductase [Sorangium cellulosum 'So ce 56'] gi|161162731|emb|CAN94036.1| Ribonucleotide-diphosphate reductase [Sorangium cellulosum 'So ce 56'] Length = 339 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 2/118 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES H+ F +V++ + E P L+ + M+ EA E +A + + G G++ Sbjct: 213 RDESAHMRFAFEVVSTARREEPELFDAGLARSILDMMDEAIACEARFAEDLLGAGVAGMS 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 A +Y++F A++R +G+ + +NPF +M ++ D+++ NFFE RV+ YQ G Sbjct: 273 ARDVRRYLEFCADQRLATLGMPKRYG-AKNPFSFM-DLQDVQEVTNFFERRVSAYQVG 328 >gi|15229476|ref|NP_189000.1| RNR2A (RIBONUCLEOTIDE REDUCTASE 2A); ribonucleoside-diphosphate reductase [Arabidopsis thaliana] gi|27735240|sp|P50651|RIR2A_ARATH RecName: Full=Ribonucleoside-diphosphate reductase small chain A; AltName: Full=Ribonucleoside-diphosphate reductase R2A subunit; Short=AtRNR2; Short=Protein R2at; AltName: Full=Ribonucleotide reductase small subunit A gi|13937232|gb|AAK50108.1|AF372971_1 AT3g23580/MDB19_7 [Arabidopsis thaliana] gi|9294514|dbj|BAB02776.1| ribonucleotide reductase [Arabidopsis thaliana] gi|23505945|gb|AAN28832.1| At3g23580/MDB19_7 [Arabidopsis thaliana] gi|332643258|gb|AEE76779.1| Ribonucleoside-diphosphate reductase small chain A [Arabidopsis thaliana] Length = 341 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ + P +K ++HEA +E + + +P +G+N Sbjct: 212 RDEGLHCDFACLLYSLLQKQLPL-------EKVYQIVHEAVEIETEFVCKALPCDLIGMN 264 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY+QF+A+R +G E +K ENPF WM E I L+ + NFFE RV EYQ+ + Sbjct: 265 SNLMSQYIQFVADRLLVTLGCERTYK-AENPFDWM-EFISLQGKTNFFEKRVGEYQKAS 321 >gi|297831106|ref|XP_002883435.1| RNR2/RNR2A [Arabidopsis lyrata subsp. lyrata] gi|297329275|gb|EFH59694.1| RNR2/RNR2A [Arabidopsis lyrata subsp. lyrata] Length = 341 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ + P +K ++HEA +E + + +P +G+N Sbjct: 212 RDEGLHCDFACLLYSLLQKQLPL-------EKVYQIVHEAVEIETEFVCKALPCDLIGMN 264 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY+QF+A+R +G E +K ENPF WM E I L+ + NFFE RV EYQ+ + Sbjct: 265 SNLMSQYIQFVADRLLVTLGCERRYK-AENPFDWM-EFISLQGKTNFFEKRVGEYQKAS 321 >gi|219110949|ref|XP_002177226.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411761|gb|EEC51689.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 409 Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 17/121 (14%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLH----EATLLEIAYAHETMPKGF 57 RDE LH +F L++K ++ S T +H EA +E + + +P G Sbjct: 278 RDEGLHCSFAC-----------QLYSKLERKLSETDMHKLIGEAVEVEKGFVCDALPVGL 326 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 +G+NA QY++F+A+R H +G L+ ++NPF WM ++I L+ + NFFE RV EYQ Sbjct: 327 IGMNASLMSQYVEFVADRLLHDLGYRTLYG-SKNPFDWM-DMISLEGKTNFFEKRVGEYQ 384 Query: 118 Q 118 + Sbjct: 385 K 385 >gi|313894221|ref|ZP_07827786.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp. oral taxon 158 str. F0412] gi|313441045|gb|EFR59472.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp. oral taxon 158 str. F0412] Length = 342 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I +++ E P L+T E ++K M+ + T EIA+ +GLN Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEEKITDMIRQGTENEIAWGQYITDDKILGLN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 E+Y++++AN R IGL L+ + +NP W+ +L K +FFE +VT Y + Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|225012154|ref|ZP_03702591.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium MS024-2A] gi|225003709|gb|EEG41682.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium MS024-2A] Length = 325 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/121 (34%), Positives = 68/121 (56%), Gaps = 8/121 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + N HL K + + +L +A +E + E++P +G+N Sbjct: 198 RDEGVHCDFAV------HLHNHHLVNKVPPARIKEILLDALTIEREFITESLPISLIGMN 251 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+ +R ++GLE F T NPF +M ++I L+ + NFFE RV EYQ+ Sbjct: 252 AKLMTQYLEFVTDRLLQELGLEKEFNVT-NPFDFM-DMISLQGKTNFFEKRVGEYQKAGV 309 Query: 122 L 122 L Sbjct: 310 L 310 >gi|182419335|ref|ZP_02950587.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium butyricum 5521] gi|237666940|ref|ZP_04526925.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376666|gb|EDT74238.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium butyricum 5521] gi|237658139|gb|EEP55694.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium butyricum E4 str. BoNT E BL5262] Length = 344 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 2/123 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I +++ EN L+T+E + + R M+ EI + H + G+N Sbjct: 218 RDENTHLWLFRNIIKELQNENAELFTEEIKNELREMMKTGVEQEILWGHYVIGDKIQGIN 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 E+Y++++ N+R +I LEPLF+ + NP PW+ + K +FFE R T Y + Sbjct: 278 KKLIEEYIKYLGNKRLKEINLEPLFEGHDVNPAPWVDRQSNANSVKTDFFEARSTAYAKA 337 Query: 120 AEL 122 A L Sbjct: 338 ATL 340 >gi|229827460|ref|ZP_04453529.1| hypothetical protein GCWU000182_02849 [Abiotrophia defectiva ATCC 49176] gi|229788398|gb|EEP24512.1| hypothetical protein GCWU000182_02849 [Abiotrophia defectiva ATCC 49176] Length = 354 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I ++ ENP ++T E + + R M+ TL EI + +G+N Sbjct: 226 RDEITHLVLFQNIIRELMKENPEIFTDELKGELREMVKVGTLNEIEWGQYVTNNEILGIN 285 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 E+Y+++++N R IGL F + TENP W+ +L K +FFE +VT Y + Sbjct: 286 NELIERYIKYLSNLRLRAIGLPVWFPEITENPMAWIESFSNLNATKTDFFEAKVTNYTKA 345 Query: 120 AELKWD 125 A +D Sbjct: 346 AAFDFD 351 >gi|148284015|ref|YP_001248105.1| ribonucleotide-diphosphate reductase subunit beta [Orientia tsutsugamushi str. Boryong] gi|146739454|emb|CAM79093.1| ribonucleoside-diphosphate reductase beta chain [Orientia tsutsugamushi str. Boryong] Length = 329 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 46/133 (34%), Positives = 74/133 (55%), Gaps = 14/133 (10%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSR------TMLH-EATLLEIAYAHETM 53 +RDE+LH N I + E P +WT+ Q KSR T++H E +++A+ Sbjct: 189 VRDETLHTNSIITLFKTFIQEYPEVWTE--QLKSRIYEACCTIIHFEDAFIDLAFE---- 242 Query: 54 PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 113 G GL A ++Y+++IA+RR Q+GL+ + +NP W+ ++++ + NFFE RV Sbjct: 243 VGGVEGLEARDVKKYIRYIADRRLLQLGLKENYLIEQNPLTWLDQILNGVEHTNFFENRV 302 Query: 114 TEYQQGAEL-KWD 125 TEY + A WD Sbjct: 303 TEYTRSATTGSWD 315 >gi|152989800|ref|YP_001355522.1| ribonucleotide-diphosphate reductase subunit beta [Nitratiruptor sp. SB155-2] gi|151421661|dbj|BAF69165.1| ribonucleoside-diphosphate reductase, beta subunit [Nitratiruptor sp. SB155-2] Length = 341 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN +K E P L+TKE M A LE ++ +GL Sbjct: 217 RDEVTHLLIFQNMINTVKKERPELFTKELIDDVYKMFEGAVDLETSWGKYITQGQILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 EQY++++A+ R ++GLEP++ E+P W+ + +K NFFE VT Y +G+ Sbjct: 277 DEIIEQYIKYLADDRLKRVGLEPMYN-VEHPIKWVDDFSKFNDQKTNFFEGNVTNYSKGS 335 >gi|294794440|ref|ZP_06759576.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp. 3_1_44] gi|294454770|gb|EFG23143.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp. 3_1_44] Length = 342 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I +++ E P L+T E + K M+ + T EIA+ +GLN Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGTENEIAWGQYITDDKILGLN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 E+Y++++AN R IGL L+ + +NP W+ +L K +FFE +VT Y + Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|189184364|ref|YP_001938149.1| ribonucleotide-diphosphate reductase subunit beta [Orientia tsutsugamushi str. Ikeda] gi|189181135|dbj|BAG40915.1| ribonucleoside-diphosphate reductase beta chain [Orientia tsutsugamushi str. Ikeda] Length = 359 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 46/133 (34%), Positives = 74/133 (55%), Gaps = 14/133 (10%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSR------TMLH-EATLLEIAYAHETM 53 +RDE+LH N I + E P +WT+ Q KSR T++H E +++A+ Sbjct: 204 VRDETLHTNSIITLFKTFIQEYPEVWTE--QLKSRIYEACCTIIHFEDAFIDLAFE---- 257 Query: 54 PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 113 G GL A ++Y+++IA+RR Q+GL+ + +NP W+ ++++ + NFFE RV Sbjct: 258 VGGVEGLEARDVKKYIRYIADRRLLQLGLKENYLIEQNPLTWLDQILNGVEHTNFFENRV 317 Query: 114 TEYQQGAEL-KWD 125 TEY + A WD Sbjct: 318 TEYTRSATTGSWD 330 >gi|152993970|ref|YP_001359691.1| ribonucleotide-diphosphate reductase subunit beta [Sulfurovum sp. NBC37-1] gi|151425831|dbj|BAF73334.1| ribonucleoside-diphosphate reductase, beta subunit [Sulfurovum sp. NBC37-1] Length = 339 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 61/120 (50%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN K E P L+TKE M +A LE + +GL Sbjct: 215 RDEVTHLLLFQNMINATKRERPELFTKELIDDVYQMFRDAVKLECEWGTYITQGQILGLT 274 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 EQY+Q++A++R H +GLE ++ E+P W+ +K NFFE VT Y +G+ Sbjct: 275 NEIIEQYIQYLADKRLHAVGLEKIYN-VEHPIKWVDNFSQFNDQKTNFFEGNVTNYSKGS 333 >gi|212723480|ref|NP_001131892.1| hypothetical protein LOC100193273 [Zea mays] gi|194692834|gb|ACF80501.1| unknown [Zea mays] gi|195624040|gb|ACG33850.1| ribonucleoside-diphosphate reductase small chain [Zea mays] Length = 339 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 68/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ +K + + RT++ +A +E + + +P VG+N Sbjct: 209 RDEGLHCDFACLLYDVLR-------SKLDEARVRTIVADAVDIEREFVCDALPVSLVGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R +G + ++ T NPF WM E+I L+ + NFFE RV +YQ+ + Sbjct: 262 GDLMSQYIEFVADRLLMALGCKKMYNVT-NPFDWM-ELISLQGKTNFFEKRVGDYQKAS 318 >gi|254374389|ref|ZP_04989871.1| glutaredoxin [Francisella novicida GA99-3548] gi|151572109|gb|EDN37763.1| glutaredoxin [Francisella novicida GA99-3548] Length = 410 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDES+H+ + ENP++ EF+++ M +A LE + G + G Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDKFIELAYELGTIEG 338 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118 L A +QY++ I +RR +Q+GL+ ++ +NP W+ +++ NFFE RVTEY+ Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398 Query: 119 GAELKWD 125 G WD Sbjct: 399 GLTGSWD 405 >gi|118497575|ref|YP_898625.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Francisella tularensis subsp. novicida U112] gi|195536272|ref|ZP_03079279.1| ribonucleoside-diphosphate reductase, beta subunit domain [Francisella tularensis subsp. novicida FTE] gi|208779374|ref|ZP_03246720.1| ribonucleoside-diphosphate reductase, beta subunit domain [Francisella novicida FTG] gi|254372936|ref|ZP_04988425.1| hypothetical protein FTCG_00507 [Francisella tularensis subsp. novicida GA99-3549] gi|118423481|gb|ABK89871.1| bifunctional protein: glutaredoxin 3 /ribonucleotide reductase beta subunit [Francisella novicida U112] gi|151570663|gb|EDN36317.1| hypothetical protein FTCG_00507 [Francisella novicida GA99-3549] gi|194372749|gb|EDX27460.1| ribonucleoside-diphosphate reductase, beta subunit domain [Francisella tularensis subsp. novicida FTE] gi|208745174|gb|EDZ91472.1| ribonucleoside-diphosphate reductase, beta subunit domain [Francisella novicida FTG] gi|332678274|gb|AEE87403.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Francisella cf. novicida Fx1] Length = 410 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDES+H+ + ENP++ EF+++ M +A LE + G + G Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDKFIELAYELGTIEG 338 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118 L A +QY++ I +RR +Q+GL+ ++ +NP W+ +++ NFFE RVTEY+ Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398 Query: 119 GAELKWD 125 G WD Sbjct: 399 GLTGSWD 405 >gi|148676854|gb|EDL08801.1| ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus] Length = 297 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K + + R ++ +A +E + E +P G +G+N Sbjct: 172 RDEGLHCDFACLMFQ-------YLVNKPSEDRVREIIADAVQIEQEFLTEALPVGLIGMN 224 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 225 CVLMKQYIEFVADRLLGELGFSKIFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 281 >gi|57339646|gb|AAW49810.1| hypothetical protein FTT0532 [synthetic construct] Length = 445 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDES+H+ + ENP++ EF+++ M +A LE + G + G Sbjct: 305 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 364 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118 L A +QY++ I +RR +Q+GL+ ++ +NP W+ +++ NFFE RVTEY+ Sbjct: 365 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 424 Query: 119 GAELKWD 125 G WD Sbjct: 425 GLTGSWD 431 >gi|330814259|ref|YP_004358498.1| ribonucleotide reductase of class Ia (aerobic), beta subunit [Candidatus Pelagibacter sp. IMCC9063] gi|327487354|gb|AEA81759.1| ribonucleotide reductase of class Ia (aerobic), beta subunit [Candidatus Pelagibacter sp. IMCC9063] Length = 345 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 9/125 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWT----KEFQQKSRTML-HEATLLEIAYAHETMPK 55 +RDE+LH N I + N ENP L KE + T++ HE +++A+ + Sbjct: 212 VRDETLHCNSMIKIFNTFCDENPGLLDDSLKKEIYEACSTIIEHEDAFIDLAFEMGDIE- 270 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 GL A ++Y+++IANRR Q+ L L++ ENP W+ ++++ + NFFE R TE Sbjct: 271 ---GLKAEEVKKYIRWIANRRLAQLRLNDLYEVKENPLTWLDDMLNGVEHMNFFEGRATE 327 Query: 116 YQQGA 120 Y + + Sbjct: 328 YSKAS 332 >gi|15896521|ref|NP_349870.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium acetobutylicum ATCC 824] gi|15026352|gb|AAK81210.1|AE007823_4 Ribonucleotide reductase beta subunit [Clostridium acetobutylicum ATCC 824] gi|325510679|gb|ADZ22315.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium acetobutylicum EA 2018] Length = 344 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 2/123 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I +++ E P ++T+E +++ + M+ EI + H + G+N Sbjct: 218 RDENTHLWLFRNIIKELQKEEPDMFTEEIKKELKDMVKTGVENEITWGHYVIGDNIQGIN 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 E Y++++ NRR IG EP+++ Y ENP W+ D K +FFE + T Y + Sbjct: 278 KKLIEDYIKYLGNRRLEAIGFEPIYEGYDENPALWVDIYADANSVKTDFFEAKSTAYAKA 337 Query: 120 AEL 122 + L Sbjct: 338 STL 340 >gi|163753569|ref|ZP_02160692.1| ribonucleoside-diphosphate reductase 1, beta subunit [Kordia algicida OT-1] gi|161325783|gb|EDP97109.1| ribonucleoside-diphosphate reductase 1, beta subunit [Kordia algicida OT-1] Length = 326 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 70/121 (57%), Gaps = 8/121 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + N HL K +++ R ++ +A +E + E++P +G+N Sbjct: 199 RDEGVHCDFAV------HLHNNHLVNKVPKERIRAIIVDALNIEREFITESLPVSLIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+ +R ++G E + + NPF +M ++I L+ + NFFE RV+EYQ+ Sbjct: 253 AKLMTQYLEFVTDRLLQELGCEKEYNVS-NPFDFM-DMISLQGKTNFFEKRVSEYQKAGV 310 Query: 122 L 122 L Sbjct: 311 L 311 >gi|254369307|ref|ZP_04985319.1| hypothetical protein FTAG_00272 [Francisella tularensis subsp. holarctica FSC022] gi|157122257|gb|EDO66397.1| hypothetical protein FTAG_00272 [Francisella tularensis subsp. holarctica FSC022] Length = 410 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDES+H+ + ENP++ EF+++ M +A LE + G + G Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 338 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118 L A +QY++ I +RR +Q+GL+ ++ +NP W+ +++ NFFE RVTEY+ Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398 Query: 119 GAELKWD 125 G WD Sbjct: 399 GLTGSWD 405 >gi|89256330|ref|YP_513692.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Francisella tularensis subsp. holarctica LVS] gi|115314778|ref|YP_763501.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Francisella tularensis subsp. holarctica OSU18] gi|156502403|ref|YP_001428469.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010840|ref|ZP_02275771.1| ribonucleotide-diphosphate reductase beta subunit [Francisella tularensis subsp. holarctica FSC200] gi|254367665|ref|ZP_04983686.1| biofunctional protein: glutaredoxin 3 protein-ribonucleoside-diphosphate reductase, beta subunit [Francisella tularensis subsp. holarctica 257] gi|290952877|ref|ZP_06557498.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Francisella tularensis subsp. holarctica URFT1] gi|295313922|ref|ZP_06804487.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Francisella tularensis subsp. holarctica URFT1] gi|89144161|emb|CAJ79423.1| Biofunctional protein, glutaredoxin 3 protein/Ribonucleoside-diphosphate reductase, beta subunit [Francisella tularensis subsp. holarctica LVS] gi|115129677|gb|ABI82864.1| ribonucleoside-diphosphate reductase [Francisella tularensis subsp. holarctica OSU18] gi|134253476|gb|EBA52570.1| biofunctional protein: glutaredoxin 3 protein-ribonucleoside-diphosphate reductase, beta subunit [Francisella tularensis subsp. holarctica 257] gi|156253006|gb|ABU61512.1| bifunctional glutaredoxin /ribonucleoside-diphosphate reductase beta subunit [Francisella tularensis subsp. holarctica FTNF002-00] Length = 410 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDES+H+ + ENP++ EF+++ M +A LE + G + G Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 338 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118 L A +QY++ I +RR +Q+GL+ ++ +NP W+ +++ NFFE RVTEY+ Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398 Query: 119 GAELKWD 125 G WD Sbjct: 399 GLTGSWD 405 >gi|56707665|ref|YP_169561.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Francisella tularensis subsp. tularensis SCHU S4] gi|110670136|ref|YP_666693.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Francisella tularensis subsp. tularensis FSC198] gi|187931834|ref|YP_001891819.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Francisella tularensis subsp. mediasiatica FSC147] gi|224456732|ref|ZP_03665205.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Francisella tularensis subsp. tularensis MA00-2987] gi|254370173|ref|ZP_04986179.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874478|ref|ZP_05247188.1| nrdB, biofunctional protein, glutaredoxin 3 protein/ribonucleoside-diphosphate reductase, beta subunit [Francisella tularensis subsp. tularensis MA00-2987] gi|56604157|emb|CAG45165.1| Biofunctional protein, glutaredoxin 3 protein/Ribonucleoside-diphosphate reductase, beta subunit [Francisella tularensis subsp. tularensis SCHU S4] gi|110320469|emb|CAL08548.1| Biofunctional protein, glutaredoxin 3 protein/Ribonucleoside-diphosphate reductase, beta subunit [Francisella tularensis subsp. tularensis FSC198] gi|151568417|gb|EDN34071.1| hypothetical protein FTBG_01287 [Francisella tularensis subsp. tularensis FSC033] gi|187712743|gb|ACD31040.1| bifunctional protein: glutaredoxin 3/ribonucleotide reductase beta subunit [Francisella tularensis subsp. mediasiatica FSC147] gi|254840477|gb|EET18913.1| nrdB, biofunctional protein, glutaredoxin 3 protein/ribonucleoside-diphosphate reductase, beta subunit [Francisella tularensis subsp. tularensis MA00-2987] gi|282158827|gb|ADA78218.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Francisella tularensis subsp. tularensis NE061598] Length = 410 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDES+H+ + ENP++ EF+++ M +A LE + G + G Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 338 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118 L A +QY++ I +RR +Q+GL+ ++ +NP W+ +++ NFFE RVTEY+ Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398 Query: 119 GAELKWD 125 G WD Sbjct: 399 GLTGSWD 405 >gi|262277047|ref|ZP_06054840.1| ribonucleoside-diphosphate reductase, beta subunit [alpha proteobacterium HIMB114] gi|262224150|gb|EEY74609.1| ribonucleoside-diphosphate reductase, beta subunit [alpha proteobacterium HIMB114] Length = 342 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 9/125 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWT----KEFQQKSRTML-HEATLLEIAYAHETMPK 55 +RDE+LH N I + N ENP L KE RT++ HE +++A+ E P Sbjct: 209 VRDETLHCNSMIKIFNTFCAENPGLLDESLKKEITDACRTIVEHEDAFIDLAF--EMGP- 265 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 GL A + Y+++IANRR Q+ L+ ++ ENP W+ +++ + NFFE R TE Sbjct: 266 -IEGLTAQQIKDYIRWIANRRLVQLKLDEIYDVKENPLEWIDTMLNGVEHMNFFEGRATE 324 Query: 116 YQQGA 120 Y + + Sbjct: 325 YSKAS 329 >gi|134301991|ref|YP_001121960.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Francisella tularensis subsp. tularensis WY96-3418] gi|134049768|gb|ABO46839.1| biofunctional glutaredoxin 3 protein/Ribonucleoside-diphosphate reductase beta subunit [Francisella tularensis subsp. tularensis WY96-3418] Length = 410 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDES+H+ + ENP++ EF+++ M +A LE + G + G Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 338 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118 L A +QY++ I +RR +Q+GL+ ++ +NP W+ +++ NFFE RVTEY+ Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398 Query: 119 GAELKWD 125 G WD Sbjct: 399 GLTGSWD 405 >gi|153940168|ref|YP_001392091.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum F str. Langeland] gi|170756361|ref|YP_001782419.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum B1 str. Okra] gi|152936064|gb|ABS41562.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum F str. Langeland] gi|169121573|gb|ACA45409.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum B1 str. Okra] gi|322807123|emb|CBZ04697.1| ribonucleotide reductase of class Ia (aerobic),beta subunit [Clostridium botulinum H04402 065] Length = 342 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I ++K EN H++T+E +++ R M+ EI + +GLN Sbjct: 214 RDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRMGVEHEIQWGQYVTNNEILGLN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 E+Y+++++N R IGL+PL+ + ++P W+ L K +FFE +VT Y + Sbjct: 274 DELIEKYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|146298285|ref|YP_001192876.1| ribonucleoside-diphosphate reductase [Flavobacterium johnsoniae UW101] gi|146152703|gb|ABQ03557.1| Ribonucleoside-diphosphate reductase [Flavobacterium johnsoniae UW101] Length = 325 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 72/124 (58%), Gaps = 8/124 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + N HL K +++ + ++ +A +E + E++P +G+N Sbjct: 198 RDEGVHCDFAV------HLHNHHLVNKVPKERIKEIIVDALDIERQFVTESLPVSLIGMN 251 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R ++G E ++ + NPF +M ++I L+ + NFFE RV EYQ+ Sbjct: 252 AGLMTQYLEFVADRLLVELGCERVYG-SANPFDFM-DMISLQGKTNFFEKRVAEYQKSGV 309 Query: 122 LKWD 125 + D Sbjct: 310 MNTD 313 >gi|282849773|ref|ZP_06259157.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella parvula ATCC 17745] gi|282580710|gb|EFB86109.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella parvula ATCC 17745] Length = 342 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I +++ E P L+T E + K M+ + EIA+ +GLN Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWGQYITDDKILGLN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 E+Y++++AN R IGL L+ + ENP W+ +L K +FFE +VT Y + Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKENPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|51891459|ref|YP_074150.1| ribonucleoside-diphosphate reductase beta subunit [Symbiobacterium thermophilum IAM 14863] gi|51855148|dbj|BAD39306.1| ribonucleoside-diphosphate reductase beta subunit [Symbiobacterium thermophilum IAM 14863] Length = 346 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 1/125 (0%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +++N ++ E P L+T + R M+ +A E+A+A + GL+ Sbjct: 220 RDEITHVAVFQNILNGLRQERPQLFTPQLDADLRAMIRQAAEHEMAWAAYCVGNRIQGLS 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + Y++ +A++R +G EPL+ NP W+ +L + K +FFETRVT Y + Sbjct: 280 GEVLQGYVKHLADQRARALGFEPLYGNHPNPIKWVESFSNLNQTKADFFETRVTNYAKST 339 Query: 121 ELKWD 125 + D Sbjct: 340 NIDLD 344 >gi|41054952|ref|NP_955770.1| ribonucleoside-diphosphate reductase subunit M2 B [Mus musculus] gi|81885688|sp|Q6PEE3|RIR2B_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B; AltName: Full=TP53-inducible ribonucleotide reductase M2 B; AltName: Full=p53-inducible ribonucleotide reductase small subunit 2-like protein; Short=p53R2 gi|34786000|gb|AAH58103.1| Ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus] gi|74218244|dbj|BAE23760.1| unnamed protein product [Mus musculus] Length = 351 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K + + R ++ +A +E + E +P G +G+N Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEDRVREIIADAVQIEQEFLTEALPVGLIGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 279 CVLMKQYIEFVADRLLGELGFSKIFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335 >gi|114799612|ref|YP_759103.1| ribonucleotide-diphosphate reductase subunit beta [Hyphomonas neptunium ATCC 15444] gi|114739786|gb|ABI77911.1| ribonucleoside-diphosphate reductase, beta subunit [Hyphomonas neptunium ATCC 15444] Length = 345 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 40/121 (33%), Positives = 67/121 (55%), Gaps = 2/121 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDESLH I + + E + T E +++ R LE + G V G Sbjct: 197 IRDESLHCEGMIKLFHSFCAETGVM-TDELRERIRDCCRTVVALEDKFIELAFEMGPVEG 255 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + A + Y+++IA+ R +Q+ LEP++ T++P PW++E+++ + NFFE R TEY +G Sbjct: 256 MTADDIKNYIRYIADWRLNQLKLEPIYGVTKHPIPWLTEILNGVEHANFFEQRSTEYSKG 315 Query: 120 A 120 A Sbjct: 316 A 316 >gi|168184457|ref|ZP_02619121.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum Bf] gi|237796249|ref|YP_002863801.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium botulinum Ba4 str. 657] gi|182672468|gb|EDT84429.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum Bf] gi|229263158|gb|ACQ54191.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum Ba4 str. 657] Length = 342 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I ++K EN H++T+E +++ R M+ EI + +GLN Sbjct: 214 RDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRIGVEHEIQWGQYVTNNEILGLN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 E+Y+++++N R IGL+PL+ + ++P W+ L K +FFE +VT Y + Sbjct: 274 DELIERYIKYLSNLRLVAIGLKPLYLEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|322510876|gb|ADX06189.1| putative ribonucleotide reductase small subunit [Organic Lake phycodnavirus 2] Length = 324 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 39/116 (33%), Positives = 71/116 (61%), Gaps = 9/116 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+LH F + + N+++ K ++K R ++ EA +E + + +P +G+N Sbjct: 201 RDEALHTEFAVYLYNRLE-------KKLNKKKVREIIEEAVTIEKEFIVDALPCRMIGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + QY++F+A+R Q+G + ++ T NPF +M E+I L+++ NFFE+RV+EY Sbjct: 254 SELMTQYIEFVADRLMMQLGCDVIYA-TNNPFDFM-ELISLEQKTNFFESRVSEYS 307 >gi|168179222|ref|ZP_02613886.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum NCTC 2916] gi|182669722|gb|EDT81698.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum NCTC 2916] Length = 342 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I ++K EN H++T+E +++ R M+ EI + +GLN Sbjct: 214 RDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRIGVEHEIQWGQYVTNNEILGLN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 E+Y+++++N R IGL+PL+ + ++P W+ L K +FFE +VT Y + Sbjct: 274 DELIERYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|27769295|gb|AAH42468.1| Similar to ribonucleotide reductase M2 polypeptide [Homo sapiens] Length = 285 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N Sbjct: 160 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 212 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 213 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 269 >gi|150024561|ref|YP_001295387.1| ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium psychrophilum JIP02/86] gi|149771102|emb|CAL42569.1| Ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium psychrophilum JIP02/86] Length = 325 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 72/124 (58%), Gaps = 8/124 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + N HL K +++ R+++ +A +E + E++P +G+N Sbjct: 198 RDEGVHCDFAV------HLHNHHLVNKVPKERIRSIIVDALNIEREFITESLPVSLIGMN 251 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R ++G + + T NPF +M ++I L+ + NFFE +V EYQ+ Sbjct: 252 AVLMTQYLEFVADRLLVELGCDREYN-TANPFDFM-DMISLQGKTNFFEKKVAEYQKAGV 309 Query: 122 LKWD 125 + D Sbjct: 310 MNTD 313 >gi|319942042|ref|ZP_08016361.1| ribonucleoside-diphosphate reductase subunit beta [Sutterella wadsworthensis 3_1_45B] gi|319804426|gb|EFW01304.1| ribonucleoside-diphosphate reductase subunit beta [Sutterella wadsworthensis 3_1_45B] Length = 344 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 10/125 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55 + DE+LH + + ENP LWT E + K + M+ E +++A+ M + Sbjct: 211 IADETLHTESMTKIFREYITENPELWTDELKAKIYGIAEVMVDLEDKFIDLAFGVSEMKR 270 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 L Y+++IA+RR +GL+ +FK T NP PW+ ++ + NFFE RV + Sbjct: 271 ----LTREDVRSYIRYIADRRLMGLGLKGIFKSTTNPLPWVDAMLGV-THTNFFENRVVD 325 Query: 116 YQQGA 120 Y +GA Sbjct: 326 YAKGA 330 >gi|114621164|ref|XP_001153859.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes] gi|332214017|ref|XP_003256123.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like [Nomascus leucogenys] gi|332830969|ref|XP_003311933.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Pan troglodytes] gi|119612248|gb|EAW91842.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_c [Homo sapiens] gi|194385642|dbj|BAG65196.1| unnamed protein product [Homo sapiens] Length = 297 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N Sbjct: 172 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 224 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 225 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 281 >gi|289177076|ref|NP_001165949.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 3 [Homo sapiens] gi|55631160|ref|XP_528204.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B isoform 3 [Pan troglodytes] gi|42794058|dbj|BAD11774.1| p53-inducible ribonucleotide reductase small subunit 2 long form [Homo sapiens] gi|119612246|gb|EAW91840.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_a [Homo sapiens] Length = 299 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N Sbjct: 174 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 226 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 227 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 283 >gi|75076588|sp|Q4R741|RIR2B_MACFA RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B gi|67969468|dbj|BAE01083.1| unnamed protein product [Macaca fascicularis] Length = 351 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVQIEQEFLTEALPVGLIGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 279 CILMKQYIEFVADRLLVELGFSKIFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335 >gi|195953600|ref|YP_002121890.1| Ribonucleoside-diphosphate reductase [Hydrogenobaculum sp. Y04AAS1] gi|195933212|gb|ACG57912.1| Ribonucleoside-diphosphate reductase [Hydrogenobaculum sp. Y04AAS1] Length = 319 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 68/114 (59%), Gaps = 6/114 (5%) Query: 1 MRDESLHLNFGIDVINQI-KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59 ++DE+ HL FGI ++N++ K +N + +++ K R ++ EA +E YA MP+ +G Sbjct: 209 LKDETRHLAFGIYLLNELLKDKNKN----DYKDKFRVLMEEAVDIETEYARVAMPEKIIG 264 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 113 L+ + Y++++A+RR +G + ++ +NP W++ DL NFFE +V Sbjct: 265 LSFETYTSYVKYLADRRMRSLGFDAIYG-QKNPMKWLTTQTDLPDLTNFFEAKV 317 >gi|197101489|ref|NP_001125944.1| ribonucleoside-diphosphate reductase subunit M2 B [Pongo abelii] gi|75041724|sp|Q5R9G0|RIR2B_PONAB RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B gi|55729743|emb|CAH91600.1| hypothetical protein [Pongo abelii] Length = 351 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 279 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335 >gi|42544136|ref|NP_056528.2| ribonucleoside-diphosphate reductase subunit M2 B isoform 1 [Homo sapiens] gi|114621161|ref|XP_001153916.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B isoform 2 [Pan troglodytes] gi|74727333|sp|Q7LG56|RIR2B_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B; AltName: Full=TP53-inducible ribonucleotide reductase M2 B; AltName: Full=p53-inducible ribonucleotide reductase small subunit 2-like protein; Short=p53R2 gi|261278726|pdb|3HF1|A Chain A, Crystal Structure Of Human P53r2 gi|261278727|pdb|3HF1|B Chain B, Crystal Structure Of Human P53r2 gi|7229086|dbj|BAA92434.1| ribonucleotide reductase [Homo sapiens] gi|7229115|dbj|BAA92493.1| ribonucleotide reductase [Homo sapiens] gi|45259569|dbj|BAD12267.1| p53-inducible ribonucleotide reductase small subunit 2 [Homo sapiens] gi|52545612|emb|CAB70703.2| hypothetical protein [Homo sapiens] gi|63055293|gb|AAY29059.1| ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens] gi|80473666|gb|AAI08262.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens] gi|109659128|gb|AAI17497.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens] gi|119612247|gb|EAW91841.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_b [Homo sapiens] gi|120660296|gb|AAI30629.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens] gi|190689549|gb|ACE86549.1| ribonucleotide reductase M2 B (TP53 inducible) protein [synthetic construct] gi|190690911|gb|ACE87230.1| ribonucleotide reductase M2 B (TP53 inducible) protein [synthetic construct] gi|261859014|dbj|BAI46029.1| ribonucleotide reductase M2 B [synthetic construct] gi|313882916|gb|ADR82944.1| ribonucleotide reductase M2 B (TP53 inducible) [synthetic construct] Length = 351 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 279 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335 >gi|148380773|ref|YP_001255314.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum A str. ATCC 3502] gi|153932443|ref|YP_001385057.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum A str. ATCC 19397] gi|153934989|ref|YP_001388527.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum A str. Hall] gi|148290257|emb|CAL84376.1| ribonucleoside-diphosphate reductase beta chain [Clostridium botulinum A str. ATCC 3502] gi|152928487|gb|ABS33987.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum A str. ATCC 19397] gi|152930903|gb|ABS36402.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum A str. Hall] Length = 342 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I ++K EN H++T+E +++ R M+ EI + +GLN Sbjct: 214 RDEVTHLVLFQNIIKELKNENLHIFTEELEEEFRQMMRMGVEHEIQWGQYVTNNEILGLN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 E+Y+++++N R IGL+PL+ + ++P W+ L K +FFE +VT Y + Sbjct: 274 DELIEKYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|255551489|ref|XP_002516790.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus communis] gi|223543878|gb|EEF45404.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus communis] Length = 342 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/120 (34%), Positives = 67/120 (55%), Gaps = 11/120 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQ-QKSRTMLHEATLLEIAYAHETMPKGFVGL 60 RDE LH +F + + L K+ Q QK + ++HEA +E + + +P +G+ Sbjct: 213 RDEGLHCDFACLLYS--------LLQKQLQWQKVQQIVHEAVEIETEFVCDALPCALIGM 264 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 N+ QY++F+A+R +G + + ENPF WM E I L+ + NFFE RV +YQ+ + Sbjct: 265 NSTLMSQYIKFVADRLLVALGYQRKYN-VENPFDWM-EFISLQGKANFFERRVGDYQKAS 322 >gi|170761039|ref|YP_001788131.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum A3 str. Loch Maree] gi|169408028|gb|ACA56439.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum A3 str. Loch Maree] Length = 342 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I ++K EN H++T+E +++ R M+ EI + +GLN Sbjct: 214 RDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRMGVEHEIQWGQYVTNNEILGLN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 E+Y+++++N R IGL+PL+ + ++P W+ L K +FFE +VT Y + Sbjct: 274 DELIERYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDGFSKLNSTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|296227442|ref|XP_002759378.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like isoform 2 [Callithrix jacchus] Length = 299 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N Sbjct: 174 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 226 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+A+R ++G F+ ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 227 CILMKQYIEFVADRLLVELGFSKFFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 283 >gi|332184137|gb|AEE26391.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Francisella cf. novicida 3523] Length = 410 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDES+H+ + ENP++ +F+++ M +A LE + G + G Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNQFKKEIYLMASKAVELEDKFIELAYELGTIEG 338 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118 L A +QY++ I +RR +Q+GL+ ++ +NP W+ +++ NFFE RVTEY+ Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398 Query: 119 GAELKWD 125 G WD Sbjct: 399 GLTGSWD 405 >gi|269798663|ref|YP_003312563.1| ribonucleotide reductase [Veillonella parvula DSM 2008] gi|294792661|ref|ZP_06757808.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp. 6_1_27] gi|269095292|gb|ACZ25283.1| ribonucleotide reductase [Veillonella parvula DSM 2008] gi|294456560|gb|EFG24923.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp. 6_1_27] Length = 342 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I +++ E P L+T E + K M+ + EIA+ +GLN Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWGQYITDDKILGLN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 E+Y++++AN R IGL L+ + +NP W+ +L K +FFE +VT Y + Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|238018468|ref|ZP_04598894.1| hypothetical protein VEIDISOL_00295 [Veillonella dispar ATCC 17748] gi|237864939|gb|EEP66229.1| hypothetical protein VEIDISOL_00295 [Veillonella dispar ATCC 17748] Length = 342 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I +++ E P L+T E + K M+ + EIA+ +GLN Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWGQYITDDKILGLN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 E+Y++++AN R IGL L+ + +NP W+ +L K +FFE +VT Y + Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|7023557|dbj|BAA92005.1| unnamed protein product [Homo sapiens] Length = 351 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGVN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 279 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335 >gi|303228685|ref|ZP_07315510.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella atypica ACS-134-V-Col7a] gi|303230495|ref|ZP_07317254.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella atypica ACS-049-V-Sch6] gi|302514861|gb|EFL56844.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella atypica ACS-049-V-Sch6] gi|302516665|gb|EFL58582.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella atypica ACS-134-V-Col7a] Length = 342 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I +++ E P L+T E + K M+ + EIA+ +GLN Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWGQYITDDKILGLN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 E+Y++++AN R IGL L+ + +NP W+ +L K +FFE +VT Y + Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|296227440|ref|XP_002759377.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like isoform 1 [Callithrix jacchus] Length = 351 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+A+R ++G F+ ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 279 CILMKQYIEFVADRLLVELGFSKFFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335 >gi|189501948|ref|YP_001957665.1| hypothetical protein Aasi_0535 [Candidatus Amoebophilus asiaticus 5a2] gi|189497389|gb|ACE05936.1| hypothetical protein Aasi_0535 [Candidatus Amoebophilus asiaticus 5a2] Length = 355 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ +A +E + + +P +G+N Sbjct: 226 RDEGLHCDFACLLYAN------HLQNKLPEERVREIITDAVAIEKEFVTDALPVKLIGMN 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R ++G ++ T NPF +M E+I L+ + NFFE RV EYQ+ Sbjct: 280 ADLMSQYIEFVADRLLLELGCSKVYNAT-NPFDFM-EMISLQGKTNFFEKRVGEYQKAGV 337 Query: 122 LK 123 +K Sbjct: 338 MK 339 >gi|288817346|ref|YP_003431693.1| ribonucleotide reductase beta subunit [Hydrogenobacter thermophilus TK-6] gi|288786745|dbj|BAI68492.1| ribonucleotide reductase beta subunit [Hydrogenobacter thermophilus TK-6] gi|308750953|gb|ADO44436.1| ribonucleotide reductase [Hydrogenobacter thermophilus TK-6] Length = 342 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 67/125 (53%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++I IK ENP L+T E ++ AT EI + +G+N Sbjct: 218 RDELTHVTLFRNIIQTIKQENPELFTPELEKWVYEFFKYATDAEIKWGQYVTQNQILGIN 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 ++Y++++AN R Q+G +PL+ + TENP W+ + + K +FF+ + Y + Sbjct: 278 NTLIDRYIKYLANLRLTQLGYKPLYPEITENPMKWIDQFRTINDTKTDFFQAKPQTYAKR 337 Query: 120 AELKW 124 +ELKW Sbjct: 338 SELKW 342 >gi|254456975|ref|ZP_05070403.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacterales bacterium GD 1] gi|207085767|gb|EDZ63051.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacterales bacterium GD 1] Length = 340 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+T + +++ M EA LE + +GL Sbjct: 215 RDEVTHLVLFQNLINTLRKERPDLFTDKLKEEVIAMFKEAVQLESEWGKYITQGQILGLT 274 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 EQY++F+A+ R +G E L+ T NP W+ + +K NFFE VT Y +G+ Sbjct: 275 NDIVEQYIKFLADERLTAVGFEKLYNVT-NPIKWVDDFAKFNDQKTNFFEGTVTNYSKGS 333 >gi|325181522|emb|CCA15972.1| ribonucleosidediphosphate reductase small chain put [Albugo laibachii Nc14] Length = 1611 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 69/121 (57%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +++ + P + ++ +A ++E + +++P +G+N Sbjct: 264 RDEGLHCDFACLMYSKLVNKLP-------EASIHAIISDAVVIEQEFVRDSLPVELIGMN 316 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R H +G+ L+ +T NPF WM ++I L+ + NFFE RV EY + Sbjct: 317 SSLMGQYIEFVADRLLHALGVSKLY-HTSNPFDWM-DMISLQGKTNFFEKRVGEYAKSGT 374 Query: 122 L 122 + Sbjct: 375 I 375 >gi|291388369|ref|XP_002710634.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like [Oryctolagus cuniculus] Length = 339 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ A +E + E +P G +G+N Sbjct: 214 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 266 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 267 CILMKQYIEFVADRLLMELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 323 >gi|241166485|ref|XP_002409876.1| ribonucleotide reductase, beta subunit, putative [Ixodes scapularis] gi|215494664|gb|EEC04305.1| ribonucleotide reductase, beta subunit, putative [Ixodes scapularis] Length = 376 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 68/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL K Q + R ++ +A ++E + + +P +G+N Sbjct: 251 RDEGLHTDFACLMFS-------HLVNKPSQARVRQIICDAVVIEQEFLTDALPVALIGMN 303 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 ++Y++F+A+R ++G E ++ +ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 304 CELMKRYIEFVADRLLVELGCEKVYN-SENPFDFM-EHISLEGKTNFFEKRVGEYQKAG 360 >gi|289177074|ref|NP_001165948.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 2 [Homo sapiens] Length = 423 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N Sbjct: 298 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 350 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 351 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 407 >gi|327269406|ref|XP_003219485.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like [Anolis carolinensis] Length = 414 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ A +E + E +P G +G+N Sbjct: 289 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 341 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 342 CTLMKQYIEFVADRLLLELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 398 >gi|50949848|emb|CAH10473.1| hypothetical protein [Homo sapiens] Length = 297 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N Sbjct: 172 RDEGLHCDFACLMFQ-------YLVNKPPEERVREIIVDAVKIEQEFLTEALPVGLIGMN 224 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 225 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 281 >gi|256081213|ref|XP_002576867.1| ribonucleoside-diphosphate reductase small chain [Schistosoma mansoni] gi|238662153|emb|CAZ33104.1| ribonucleoside-diphosphate reductase small chain, putative [Schistosoma mansoni] Length = 365 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 68/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + I + P +++ +++ EA L+E + E +P +G+N Sbjct: 237 RDEGLHCDFACLLFKHIIKKPP-------KERVESIIREAVLIEQEFLSEALPVSLIGMN 289 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++FIA+R ++G E ++ +++NPF +M E I ++ + NFFE RV EYQ+ Sbjct: 290 CKLMCQYIEFIADRLLVELGYEKMY-HSDNPFDFM-ENISIEGKTNFFEKRVGEYQRAG 346 >gi|1710401|sp|P49730|RIR2_TOBAC RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleoside-diphosphate reductase R2 subunit; AltName: Full=Ribonucleotide reductase small subunit gi|1044912|emb|CAA63194.1| ribonucleotide reductase R2 [Nicotiana tabacum] Length = 329 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 68/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ TK +++ + ++ +A +E + + +P VG+N Sbjct: 200 RDEGLHCDFACLLYSLLR-------TKLTEERVKGIVADAVEIEREFVCDALPCALVGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +Y++F+A+R +G + L+ +NPF WM E+I L+ + NFFE RV EYQ+ + Sbjct: 253 GDLMSKYIEFVADRLLDALGYDKLYN-AQNPFDWM-ELISLQGKTNFFEKRVGEYQKAS 309 >gi|194673004|ref|XP_607398.4| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos taurus] gi|297482473|ref|XP_002692807.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like [Bos taurus] gi|296480530|gb|DAA22645.1| ribonucleotide reductase M2 polypeptide-like [Bos taurus] Length = 351 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ A +E + E +P G +G+N Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 279 CVLMKQYIEFVADRLLTELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335 >gi|281200507|gb|EFA74725.1| ribonucleotide reductase small subunit [Polysphondylium pallidum PN500] Length = 335 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 70/124 (56%), Gaps = 13/124 (10%) Query: 2 RDESLHLNFGIDVINQI--KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59 RDE LH +F + ++ K++N + T++ +A E + E++P +G Sbjct: 201 RDEGLHCDFACLLYQKLQNKLDNNTI---------ETIIRDAVACEKEFITESLPVDLIG 251 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +N+ S QY++F A+R +G + ++ + NPF WM E+I L+++ NFFE +V+EYQ+ Sbjct: 252 MNSRSMSQYIEFCADRLLLSLGYKKIYN-SSNPFDWM-EMISLQRKTNFFEGKVSEYQKS 309 Query: 120 AELK 123 K Sbjct: 310 GVAK 313 >gi|91215505|ref|ZP_01252476.1| probable ribonucleoside-diphosphate reductase small chain [Psychroflexus torquis ATCC 700755] gi|91186457|gb|EAS72829.1| probable ribonucleoside-diphosphate reductase small chain [Psychroflexus torquis ATCC 700755] Length = 326 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 69/119 (57%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + N HL + +++ R ++ +A +E + E++P +G+N Sbjct: 198 RDEGVHCDFAV------HLHNEHLVNQVPKERIRAIIVDALTIEREFVTESLPVSLIGMN 251 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R ++G + + T NPF +M ++I L+ + NFFE RV EYQ+ Sbjct: 252 SNLMTQYLEFVADRLLFELGCDKEYG-TANPFDFM-DMISLQGKTNFFEKRVGEYQKAG 308 >gi|290995765|ref|XP_002680453.1| predicted protein [Naegleria gruberi] gi|284094074|gb|EFC47709.1| predicted protein [Naegleria gruberi] Length = 338 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 68/118 (57%), Gaps = 8/118 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +K +TK QQ ++++EA +E + E++P +G+N Sbjct: 212 RDEGLHTDFACLLYSTLK------YTKLPQQVVHSLVYEAVEIEKEFISESLPVDLIGMN 265 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + +QY++ +A+R IG E ++ + NPF WM+ +I + + NFFE +V EY + Sbjct: 266 SRLMQQYIEMVADRLLVSIGYEKIYN-SSNPFDWMN-IISVSGKTNFFEKKVGEYAKA 321 >gi|86134368|ref|ZP_01052950.1| ribonucleoside-diphosphate reductase small chain [Polaribacter sp. MED152] gi|85821231|gb|EAQ42378.1| ribonucleoside-diphosphate reductase small chain [Polaribacter sp. MED152] Length = 323 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 68/119 (57%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + N H+ + + + + ++ +A +E + E++P +G+N Sbjct: 198 RDEGMHCDFAV------HLHNNHIVNRVPKDRIKEIIVDALDIEREFVTESLPVSLIGMN 251 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+ +R + G E ++ T NPF +M E+I L+ + NFFE RV+EYQ+ Sbjct: 252 AKLMTQYLEFVTDRLLLEFGCEKVYDVT-NPFDFM-EMISLEGKTNFFEKRVSEYQKAG 308 >gi|307719930|ref|YP_003891070.1| Ribonucleoside-diphosphate reductase [Sulfurimonas autotrophica DSM 16294] gi|306978023|gb|ADN08058.1| Ribonucleoside-diphosphate reductase [Sulfurimonas autotrophica DSM 16294] Length = 340 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+T E + M EA LE + +GL Sbjct: 215 RDEVTHLVLFQNLINTLRKERPDLFTDELRADVIEMFKEAVKLETEWGKYITQGQILGLT 274 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 EQY+Q++A+ R + +G + L+ + NP W+ + +K NFFE VT Y +G+ Sbjct: 275 DEIVEQYIQYLADDRLNSVGFDKLYNVS-NPIKWVDDFAKFNDQKTNFFEGTVTNYSKGS 333 >gi|253827828|ref|ZP_04870713.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter canadensis MIT 98-5491] gi|313142391|ref|ZP_07804584.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter canadensis MIT 98-5491] gi|253511234|gb|EES89893.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter canadensis MIT 98-5491] gi|313131422|gb|EFR49039.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter canadensis MIT 98-5491] Length = 341 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN +K E+P L+TK+ +++ M EA +E A+ +GL Sbjct: 217 RDEVTHLILFQNMINSVKKESPELFTKDLEEEVIEMFREAVKVETAWGEYITQGQILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + ++Y++++A+ R +IGL L+ ++P W+ ++K NFFE VT Y +G+ Sbjct: 277 SEIIQEYIKYLADERLRRIGLPTLYN-AKHPIKWVDSFSSFNEQKTNFFEGNVTNYAKGS 335 >gi|326792202|ref|YP_004310023.1| ribonucleotide reductase [Clostridium lentocellum DSM 5427] gi|326542966|gb|ADZ84825.1| ribonucleotide reductase [Clostridium lentocellum DSM 5427] Length = 342 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I ++K ENP L+T+ ++ R M+ EIA+ +G+N Sbjct: 214 RDEITHLVVFQNIIKELKKENPELFTESMIEEFREMMRVGVEHEIAWGQYVTANEIMGIN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 + Y+++++N+R IGLE L+ + T +P W+ L K +FFE +VT Y + Sbjct: 274 DQLIDAYIKYLSNQRLKAIGLEELYPEITTHPMAWIDSFSKLNNTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|150015087|ref|YP_001307341.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium beijerinckii NCIMB 8052] gi|149901552|gb|ABR32385.1| Ribonucleoside-diphosphate reductase [Clostridium beijerinckii NCIMB 8052] Length = 344 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 2/123 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I +++ ENP L+T+E + + R M+ EI + H + G+N Sbjct: 218 RDENTHLWLFRNIIKELQNENPELFTEEVKNELRNMMKIGVEQEILWGHYVIGDKIQGIN 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 E Y++++ N+R +I L PLFK + NP W+ + + K +FFE R T Y + Sbjct: 278 KQLIENYIKYLGNKRLKEINLSPLFKEQDKNPASWVDTLSNANSVKTDFFEARSTAYAKV 337 Query: 120 AEL 122 L Sbjct: 338 TTL 340 >gi|300676950|gb|ADK26821.1| ribonucleotide reductase M2 [Zonotrichia albicollis] Length = 390 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 66/117 (56%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A L+E + E +P +G+N Sbjct: 265 RDEGLHCDFACLMFK-------HLIHKPSEERVREIIMNAVLIEQEFLTEALPVKLIGMN 317 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G ++K ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQR 372 >gi|225850104|ref|YP_002730338.1| ribonucleoside-diphosphate reductase, beta subunit [Persephonella marina EX-H1] gi|225645787|gb|ACO03973.1| ribonucleoside-diphosphate reductase, beta subunit [Persephonella marina EX-H1] Length = 329 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 3/116 (2%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKE-FQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60 DESLHL GI+ I I ENP + E F + + + +A LE+ Y + G+ Sbjct: 212 DESLHLQNGIEAILTIVEENPEIVDDEKFVENIKETIIDAVELELNYLKTKFGGTTIFGV 271 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 + E+YM++IA+RR ++G +P FK +NP ++ + D+KK NFFE TEY Sbjct: 272 SYKELEKYMKYIADRRLEELGFDPQFKIDQNPLKFLQKE-DVKKLTNFFEVSSTEY 326 >gi|120437796|ref|YP_863482.1| ribonucleoside-diphosphate reductase small chain [Gramella forsetii KT0803] gi|117579946|emb|CAL68415.1| ribonucleoside-diphosphate reductase small chain [Gramella forsetii KT0803] Length = 325 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 8/124 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + NQ HL + ++K R +L +A +E + E++P +G+N Sbjct: 198 RDEGMHCDFAVHLHNQ------HLVNQVPKEKIREILIDALNIEREFVTESLPVSLIGMN 251 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+ +R ++ E + + NPF +M ++I+L+ + NFFE RV+EYQ+ Sbjct: 252 AKLMTQYLEFVTDRLLVELDCEKEYNVS-NPFDFM-DMINLQGKTNFFEKRVSEYQKAGV 309 Query: 122 LKWD 125 + D Sbjct: 310 MNKD 313 >gi|224418874|ref|ZP_03656880.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter canadensis MIT 98-5491] Length = 340 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN +K E+P L+TK+ +++ M EA +E A+ +GL Sbjct: 216 RDEVTHLILFQNMINSVKKESPELFTKDLEEEVIEMFREAVKVETAWGEYITQGQILGLT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + ++Y++++A+ R +IGL L+ ++P W+ ++K NFFE VT Y +G+ Sbjct: 276 SEIIQEYIKYLADERLRRIGLPTLYN-AKHPIKWVDSFSSFNEQKTNFFEGNVTNYAKGS 334 >gi|78776214|ref|YP_392529.1| ribonucleotide-diphosphate reductase subunit beta [Sulfurimonas denitrificans DSM 1251] gi|78496754|gb|ABB43294.1| Ribonucleoside-diphosphate reductase [Sulfurimonas denitrificans DSM 1251] Length = 340 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+ ++ +++ M EA LE+A+ +GL Sbjct: 215 RDEVTHLVLFQNLINSLRKERPDLFNEKLKEEVIEMFKEAVALEVAWGKYITGGQILGLT 274 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 EQY+Q++A+ R +G L+ T NP W+ + +K NFFE V Y +G+ Sbjct: 275 DAIIEQYIQYLADDRLTSVGFAKLYNVT-NPIKWVDDFSKFNDQKTNFFEGTVANYSKGS 333 >gi|118443949|ref|YP_878438.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium novyi NT] gi|118134405|gb|ABK61449.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium novyi NT] Length = 342 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 68/126 (53%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I ++K ENP ++T+ ++ R M+ EI + +G+N Sbjct: 214 RDEITHLILFQNIIKELKNENPDIFTESIMEEFRMMMKMGVEHEIKWGQYVTNNEILGIN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 E+Y+++++N R + IGLE L+ + TE+P W+ L K +FFE +VT Y + Sbjct: 274 DNLIEKYIKYLSNLRLNAIGLEVLYPEITEHPMEWIENFSKLNNTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|118087248|ref|XP_418364.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 353 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +L + +++ R ++ A +E + E +P G +G+N Sbjct: 228 RDEGLHCDFACLMFH-------YLVNRPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+A+R ++G +F + ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 281 CTLMKQYIEFVADRLLMELGFSKVF-HAENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 337 >gi|313683656|ref|YP_004061394.1| ribonucleotide reductase [Sulfuricurvum kujiense DSM 16994] gi|313156516|gb|ADR35194.1| ribonucleotide reductase [Sulfuricurvum kujiense DSM 16994] Length = 339 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T+E ++ M +A LE A+ +GL Sbjct: 215 RDEVTHLVLFQNIINTLRRERSDLFTEELIEEVYDMFRKAVELETAWGKYITQGQILGLT 274 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 EQY+Q++A++R +GL+PL+ +P W+ + +K NFFE VT Y +G+ Sbjct: 275 NEIVEQYIQYLADQRLTAVGLKPLYN-VSHPIKWVDDFSKFNDQKTNFFEGTVTNYSKGS 333 >gi|194036959|ref|XP_001925036.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Sus scrofa] Length = 351 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K + + R ++ A +E + E +P G +G+N Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEARVREIIVNAVEIEQEFLTEALPVGLIGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 279 CVLMKQYIEFVADRLLTELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335 >gi|45268714|dbj|BAD12266.1| p53-inducible ribonucleotide reductase small subunit 2 short form gamma [Homo sapiens] Length = 139 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 +DE LH +F + +L K +++ R ++ +A +E + E +P G +G+N Sbjct: 14 QDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 66 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 67 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 123 >gi|242309209|ref|ZP_04808364.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pullorum MIT 98-5489] gi|239524250|gb|EEQ64116.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pullorum MIT 98-5489] Length = 341 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 66/120 (55%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN K E+P +TK+ +++ M EA +EIA+ +GL Sbjct: 217 RDEVTHLLLFQNMINSTKKESPEFFTKDLEEEVLEMFREAVKVEIAWGEYITQGQILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 A ++Y++++A+ R ++GL P+ ++P W+ ++K NFFE VT Y +G+ Sbjct: 277 AEIIQEYIKYLADDRLRRVGL-PVLYNAKHPIKWVDSFSSFNEQKTNFFEGNVTNYAKGS 335 >gi|227498392|ref|ZP_03928542.1| ribonucleoside-diphosphate reductase [Acidaminococcus sp. D21] gi|226903854|gb|EEH89772.1| ribonucleoside-diphosphate reductase [Acidaminococcus sp. D21] Length = 342 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL +++ +++ E P L+TKE M+ + EI + +GLN Sbjct: 214 RDEVTHLILFQNILRELRHERPDLFTKEQDAHIADMIRQGAENEIKWGQYITDDKILGLN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 E+Y++++AN R IGL PL+ + ++NP W+ +L K +FFE +VT Y + Sbjct: 274 NGLIEKYIKYLANIRLEAIGLAPLYPEISQNPMEWIESFSNLNGTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|257067181|ref|YP_003153437.1| ribonucleotide-diphosphate reductase subunit beta [Anaerococcus prevotii DSM 20548] gi|256799061|gb|ACV29716.1| Ribonucleoside-diphosphate reductase [Anaerococcus prevotii DSM 20548] Length = 352 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 4/123 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +IN +K E L+ E Q R ML E EIA+ ++ GLN Sbjct: 224 RDENTHLWLFRSLINDLKKEREDLFVPELQNYYREMLKEGVEQEIAWGKYSIGNSIAGLN 283 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 E Y++++ N R +GLEPL++ Y E P W+ E D K +FFE +VT Y Sbjct: 284 EKMIEDYIKYLGNLRAKGLGLEPLYEGYKEIPESMKWVDEYSDPNGVKTDFFEAKVTAYS 343 Query: 118 QGA 120 + + Sbjct: 344 KSS 346 >gi|289548460|ref|YP_003473448.1| ribonucleoside-diphosphate reductase [Thermocrinis albus DSM 14484] gi|289182077|gb|ADC89321.1| Ribonucleoside-diphosphate reductase [Thermocrinis albus DSM 14484] Length = 342 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H++ ++I +K ENP L+T E ++ + A EI + +G+N Sbjct: 218 RDELTHVSLFRNIILTLKKENPELFTPEMEKWVKEFFRYAASEEIKWGQYVTRNQILGIN 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 ++Y++++AN R QIG EP+F TENP W+ + K +FF+ + Y + Sbjct: 278 DQLIDRYIKYLANLRLTQIGYEPVFPDVTENPMKWIDTFRTINDTKTDFFQAKPQTYAKR 337 Query: 120 AELKW 124 +ELKW Sbjct: 338 SELKW 342 >gi|326917964|ref|XP_003205263.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like [Meleagris gallopavo] Length = 353 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +L + +++ R ++ A +E + E +P G +G+N Sbjct: 228 RDEGLHCDFACLMFH-------YLVNRPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+A+R ++G +F + ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 281 CTLMKQYIEFVADRLLMELGFSKVF-HAENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 337 >gi|118089007|ref|XP_419948.2| PREDICTED: similar to small subunit ribonucleotide reductase isoform 2 [Gallus gallus] Length = 384 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ + ++ A L+E + E +P +G+N Sbjct: 259 RDEGLHCDFACLMFK-------HLIRKPSEERVKEIIMNAVLIEQEFLTEALPVKLIGMN 311 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G ++K ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 312 CTLMKQYIEFVADRLMLELGFRKIYK-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 366 >gi|7106399|ref|NP_033130.1| ribonucleoside-diphosphate reductase subunit M2 [Mus musculus] gi|132626|sp|P11157|RIR2_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2; AltName: Full=Ribonucleotide reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|22218698|pdb|1H0N|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase To Model The Reactive Diferrous State gi|22218699|pdb|1H0O|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase To Model The Reactive Diferrous State gi|52696260|pdb|1W68|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase Subunit R2 Under Oxidizing Conditions. A Fully Occupied Dinuclear Iron Cluster. gi|52696261|pdb|1W69|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase Subunit R2 Under Reducing Conditions. A Fully Occupied Dinuclear Iron Cluster And Bound Acetate. gi|157834262|pdb|1XSM|A Chain A, Protein R2 Of Ribonucleotide Reductase From Mouse gi|50720|emb|CAA33707.1| M2 ribonucleotide reductase [Mus musculus] gi|200768|gb|AAA40062.1| ribonucleotide reductase subunit M2 [Mus musculus] gi|26354034|dbj|BAC40647.1| unnamed protein product [Mus musculus] gi|54887418|gb|AAH85136.1| Ribonucleotide reductase M2 [Mus musculus] gi|74139292|dbj|BAE40793.1| unnamed protein product [Mus musculus] gi|74151119|dbj|BAE27683.1| unnamed protein product [Mus musculus] gi|74179887|dbj|BAE36508.1| unnamed protein product [Mus musculus] gi|74188932|dbj|BAE39238.1| unnamed protein product [Mus musculus] gi|74189151|dbj|BAE39331.1| unnamed protein product [Mus musculus] gi|74206394|dbj|BAE24918.1| unnamed protein product [Mus musculus] gi|74211991|dbj|BAE40165.1| unnamed protein product [Mus musculus] Length = 390 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ R ++ A +E + E +P +G+N Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPAEQRVREIITNAVRIEQEFLTEALPVKLIGMN 317 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 372 >gi|281340156|gb|EFB15740.1| hypothetical protein PANDA_011632 [Ailuropoda melanoleuca] Length = 336 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ A +E + E +P G +G+N Sbjct: 211 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 263 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ A Sbjct: 264 CVLMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVAEYQRFA 320 >gi|118089009|ref|XP_001231545.1| PREDICTED: similar to small subunit ribonucleotide reductase isoform 1 [Gallus gallus] Length = 392 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ + ++ A L+E + E +P +G+N Sbjct: 267 RDEGLHCDFACLMFK-------HLIRKPSEERVKEIIMNAVLIEQEFLTEALPVKLIGMN 319 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G ++K ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 320 CTLMKQYIEFVADRLMLELGFRKIYK-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 374 >gi|74207686|dbj|BAE40088.1| unnamed protein product [Mus musculus] Length = 390 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ R ++ A +E + E +P +G+N Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPAEQRVREIITNAVRIEQEFLTEALPVKLIGMN 317 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 372 >gi|326916502|ref|XP_003204546.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like [Meleagris gallopavo] Length = 339 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ + ++ A L+E + E +P +G+N Sbjct: 214 RDEGLHCDFACLMFK-------HLIRKPSEERVKEIIMNAVLIEQEFLTEALPVKLIGMN 266 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G ++K ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 267 CTLMKQYIEFVADRLMLELGFRKIYK-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 321 >gi|241668401|ref|ZP_04755979.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876934|ref|ZP_05249644.1| glutaredoxin 3/ribonucleotide reductase beta subunit [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842955|gb|EET21369.1| glutaredoxin 3/ribonucleotide reductase beta subunit [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 410 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDES+H+ + ENP++ +F+++ M +A LE + G + G Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNQFKKEIYLMASKAVELEDKFIDLAYEIGTIEG 338 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118 L A ++Y++ I +RR +Q+GL ++ +NP W+ +++ NFFE RVTEY+ Sbjct: 339 LKADEVKEYIRHITDRRLNQLGLNEIYNIDKNPLTWLEWILNGADHTNFFENRVTEYEVA 398 Query: 119 GAELKWD 125 G WD Sbjct: 399 GLTGNWD 405 >gi|148705043|gb|EDL36990.1| ribonucleotide reductase M2 [Mus musculus] Length = 411 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ R ++ A +E + E +P +G+N Sbjct: 286 RDEGLHCDFACLMFK-------HLVHKPAEQRVREIITNAVRIEQEFLTEALPVKLIGMN 338 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 339 CTLMKQYIEFVADRLMLELGFNKIFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 393 >gi|6525234|gb|AAF15363.1|AF205376_1 ribonucleotide reductase R2 subunit [Plasmodium falciparum] Length = 320 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 69/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + + + P +Q + ++ EA +E ++ E++P +G+N Sbjct: 195 RDEGLHTDFNCLIYSLLDNKLP-------EQMVQNIVKEAVEVERSFICESLPCDLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G +F +++NPF WM ++I L+ + NFFE RV +YQ+ Sbjct: 248 SRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWM-DLISLQGKTNFFEKRVADYQKSG 304 >gi|73974198|ref|XP_539109.2| PREDICTED: similar to ribonucleotide reductase M2 B (TP53 inducible) isoform 2 [Canis familiaris] Length = 351 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ A +E + E +P G +G+N Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ A Sbjct: 279 CVLMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVAEYQRFA 335 >gi|167627842|ref|YP_001678342.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597843|gb|ABZ87841.1| Ribonucleoside-diphosphate reductase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 410 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDES+H+ + ENP++ +F+++ M +A LE + G + G Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNQFKKEIYLMASKAVELEDKFIDLAYEIGTIEG 338 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118 L A ++Y++ I +RR +Q+GL ++ +NP W+ +++ NFFE RVTEY+ Sbjct: 339 LKADEVKEYIRHITDRRLNQLGLNEIYNIDKNPLTWLEWILNGADHTNFFENRVTEYEVA 398 Query: 119 GAELKWD 125 G WD Sbjct: 399 GLTGNWD 405 >gi|302409182|ref|XP_003002425.1| ribonucleoside-diphosphate reductase small chain [Verticillium albo-atrum VaMs.102] gi|261358458|gb|EEY20886.1| ribonucleoside-diphosphate reductase small chain [Verticillium albo-atrum VaMs.102] Length = 414 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +Q + ++ +A +E + E +P G +G+N Sbjct: 276 RDEGLHTDFACLLFS-------HLNNRPSKQTVQDIVTDAVNIEQEFLTEALPCGLLGMN 328 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A +QY++F+A+R +G E ++K T NPF +M E I L + NFFE RV +YQ+ Sbjct: 329 ATLMKQYIEFVADRLLVALGNEKVYKAT-NPFDFM-ENISLGGKTNFFEKRVADYQKAG 385 >gi|124808087|ref|XP_001348226.1| ribonucleotide reductase small subunit [Plasmodium falciparum 3D7] gi|23497116|gb|AAN36665.1|AE014816_50 ribonucleotide reductase small subunit [Plasmodium falciparum 3D7] Length = 349 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 69/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + + + P +Q + ++ EA +E ++ E++P +G+N Sbjct: 224 RDEGLHTDFNCLIYSLLDNKLP-------EQMVQNIVKEAVEVERSFICESLPCDLIGMN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G +F +++NPF WM ++I L+ + NFFE RV +YQ+ Sbjct: 277 SRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWM-DLISLQGKTNFFEKRVADYQKSG 333 >gi|301774462|ref|XP_002922647.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like [Ailuropoda melanoleuca] Length = 387 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ A +E + E +P G +G+N Sbjct: 262 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 314 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ A Sbjct: 315 CVLMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVAEYQRFA 371 >gi|301772278|ref|XP_002921557.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like [Ailuropoda melanoleuca] Length = 393 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ R ++ A +E + E +P +G+N Sbjct: 268 RDEGLHCDFACLMFK-------HLVHKPSEQRVREIIINAVRIEQEFLTEALPVKLIGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 321 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 375 >gi|45360749|ref|NP_989048.1| ribonucleotide reductase M2, gene 1 [Xenopus (Silurana) tropicalis] gi|38174078|gb|AAH61353.1| ribonucleotide reductase M2 polypeptide [Xenopus (Silurana) tropicalis] Length = 378 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 68/117 (58%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K +Q+ R ++ +A +E + E +P +G+N Sbjct: 253 RDEGLHTDFACLLFK-------HVVHKPSEQRVREIIIDAVKIEQEFLTEALPVELIGMN 305 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G + +FK +ENPF +M E I L+ + NFFE +V EYQ+ Sbjct: 306 CKLMKQYIEFVADRLLLELGFKKIFK-SENPFDFM-ENISLEGKTNFFEKKVAEYQK 360 >gi|194474072|ref|NP_001124015.1| ribonucleoside-diphosphate reductase subunit M2 B [Rattus norvegicus] gi|149066498|gb|EDM16371.1| ribonucleotide reductase M2 B (TP53 inducible) (predicted) [Rattus norvegicus] Length = 351 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 68/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ ++ +A +E + E +P G +G+N Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVMEIIVDAVKIEQEFLTEALPVGLIGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 279 CVLMKQYIEFVADRLLGELGFSKIFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335 >gi|293343290|ref|XP_002725449.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like [Rattus norvegicus] gi|293355176|ref|XP_002728627.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Rattus norvegicus] Length = 390 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIITNAVRIEQEFLTEALPVKLIGMN 317 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +FK ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIFK-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 372 >gi|227485717|ref|ZP_03916033.1| ribonucleoside-diphosphate reductase [Anaerococcus lactolyticus ATCC 51172] gi|227236272|gb|EEI86287.1| ribonucleoside-diphosphate reductase [Anaerococcus lactolyticus ATCC 51172] Length = 352 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +IN +K E P L+T E R ML E EI + + GL+ Sbjct: 224 RDENTHLWLFRSLINDLKKERPDLFTPEATIVYRDMLKEGVRQEIEWGKYAIGDNIAGLS 283 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 E Y++++ N R +G +PLF+ YTE P W+ E D + K +FFE +VT Y Sbjct: 284 TTMIEDYIKYLGNLRAKGLGFDPLFEGYTEIPQSMKWVDEYSDPNRVKTDFFEAKVTAYS 343 Query: 118 QGAELKWD 125 + + ++ D Sbjct: 344 KSSIIEDD 351 >gi|224438210|ref|ZP_03659145.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter cinaedi CCUG 18818] gi|313144656|ref|ZP_07806849.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter cinaedi CCUG 18818] gi|313129687|gb|EFR47304.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter cinaedi CCUG 18818] Length = 348 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL +IN ++ E PHL+T +++ M +A +E + +GL Sbjct: 224 RDEVTHLLVFQQMINALRKEQPHLFTPSLEEEVIAMFQKAVEIESVWGEYITQGQILGLT 283 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 A +Y+Q++A+ R +GL ++ +++NP W+ + +K NFFE +VT Y +G+ Sbjct: 284 AEIIREYIQYLADMRLRAVGLREIY-HSKNPIKWVEQFASFNDQKTNFFEAKVTNYSKGS 342 >gi|330998673|ref|ZP_08322403.1| ribonucleoside-diphosphate reductase, beta subunit [Parasutterella excrementihominis YIT 11859] gi|329576534|gb|EGG58042.1| ribonucleoside-diphosphate reductase, beta subunit [Parasutterella excrementihominis YIT 11859] Length = 327 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 8/125 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55 + DE+LH I + + IENP LWT +++ + M+ E +++A+ M K Sbjct: 191 INDETLHTESMIRLFREYIIENPELWTDSLKKRIYDIAEKMIELEDAFIDLAFGVNDMSK 250 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 L+ + Y+++I +RR +G++ +FK NP PW+ ++ + NFFE RV + Sbjct: 251 Q--NLSPADVKAYIRWICDRRLAAMGMKEIFKVNVNPLPWVDSMLGV-THTNFFENRVVD 307 Query: 116 YQQGA 120 Y +GA Sbjct: 308 YAKGA 312 >gi|321263951|ref|XP_003196693.1| ribonucleotide reductase small subunit [Cryptococcus gattii WM276] gi|317463170|gb|ADV24906.1| Ribonucleotide reductase small subunit, putative [Cryptococcus gattii WM276] Length = 430 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 9/118 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + N +K T E + ++ EA ++E + + +P +G+N Sbjct: 294 RDEGMHTDFACLLYNHLK---HRCSTDEVHR----IVSEALVIEKQFLTDALPCALIGIN 346 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 A QYM+F+A+R +G ++ T NPF WM E+I L+ + NFFE+RV+ YQ+ Sbjct: 347 AHLMCQYMEFVADRLVVDLGYPKIYNAT-NPFDWM-ELISLQGKANFFESRVSAYQKA 402 >gi|242095388|ref|XP_002438184.1| hypothetical protein SORBIDRAFT_10g009290 [Sorghum bicolor] gi|241916407|gb|EER89551.1| hypothetical protein SORBIDRAFT_10g009290 [Sorghum bicolor] Length = 339 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++ +K + + R ++ +A +E + + +P VG+N Sbjct: 209 RDEGLHCDFACLLYELLR-------SKLDEARVREIVADAVDIEREFVCDALPVALVGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R +G + ++ T NPF WM E+I L+ + NFFE RV +YQ+ + Sbjct: 262 GGLMSQYIEFVADRLLMALGCKKMYNAT-NPFDWM-ELISLQGKTNFFEKRVGDYQKAS 318 >gi|303258316|ref|ZP_07344319.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderiales bacterium 1_1_47] gi|302858762|gb|EFL81850.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderiales bacterium 1_1_47] Length = 328 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 8/125 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55 + DE+LH I + + IENP LWT +++ + M+ E +++A+ M K Sbjct: 192 INDETLHTESMIRLFREYIIENPELWTDSLKKRIYDIAEKMIELEDAFIDLAFGVNDMSK 251 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 L+ + Y+++I +RR +G++ +FK NP PW+ ++ + NFFE RV + Sbjct: 252 Q--NLSPADVKAYIRWICDRRLAAMGMKEIFKVNVNPLPWVDSMLGV-THTNFFENRVVD 308 Query: 116 YQQGA 120 Y +GA Sbjct: 309 YAKGA 313 >gi|310831442|ref|YP_003970085.1| putative ribonucleoside-diphosphate reductase small subunit [Cafeteria roenbergensis virus BV-PW1] gi|309386626|gb|ADO67486.1| putative ribonucleoside-diphosphate reductase small subunit [Cafeteria roenbergensis virus BV-PW1] Length = 326 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 9/118 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H ++ I + + ++ K Q+K + M +A E + E++P +G+N Sbjct: 201 RDEGMHCDYSIMLYHMLQ-------NKLSQEKIQQMFKDAVETERIFICESLPCSLLGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 A EQY++F+A++ ++G +FK +NPF WM E I ++ + NFFE R T+YQ+ Sbjct: 254 ADLMEQYIKFVADQLIIKLGYNKIFK-VDNPFTWM-EAISIEGKTNFFEHRPTQYQRA 309 >gi|149637725|ref|XP_001508783.1| PREDICTED: similar to Ribonucleotide reductase M2 B (TP53 inducible) [Ornithorhynchus anatinus] Length = 401 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 71/119 (59%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F ++ Q ++ P + K + ++ +A +E + E +P G +G+N Sbjct: 276 RDEGLHCDFAC-LMFQYLVKKPS------EDKVKEIIIDAVEIEQEFLTEALPVGLIGMN 328 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+A+R ++G +F +++NPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 329 CTLMKQYIEFVADRLLVELGFSKVF-HSDNPFDFM-ENISLEGKTNFFEKRVSEYQRFA 385 >gi|313675915|ref|YP_004053911.1| ribonucleoside-diphosphate reductase [Marivirga tractuosa DSM 4126] gi|312942613|gb|ADR21803.1| Ribonucleoside-diphosphate reductase [Marivirga tractuosa DSM 4126] Length = 331 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 69/122 (56%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N HL K ++K ++ +A +E + +++P +G+N Sbjct: 202 RDEGLHCDFAC------LLYNDHLVNKLSKEKVTAIITDAVEIEKEFVTDSLPVKLIGMN 255 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R ++ + ++ + NPF +M E+I L+ + NFFE RV +YQ+ Sbjct: 256 ADLMCQYIEFVADRLLQELRCDKVYG-SSNPFDFM-EMISLQGKTNFFEKRVGDYQKAGV 313 Query: 122 LK 123 +K Sbjct: 314 MK 315 >gi|294950175|ref|XP_002786498.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus ATCC 50983] gi|239900790|gb|EER18294.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus ATCC 50983] Length = 350 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 67/119 (56%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N +K +T+ ++ ++ A +E + E++P +G+N Sbjct: 208 RDEGLHADFACLLYNMLK------YTRLPDERVHEIVRGAVEVERVFISESLPVSLIGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + +Y++F+A+R +G L+ T NPF WM ++I L+ + NFFE RV EYQ+G Sbjct: 262 SQLMCRYIEFVADRLLVALGHPKLYNAT-NPFDWM-KMISLQGKTNFFEKRVGEYQKGG 318 >gi|224048725|ref|XP_002196356.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Taeniopygia guttata] Length = 390 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ + ++ A L+E + E +P +G+N Sbjct: 265 RDEGLHCDFACLMFK-------HLIHKPSEERVKEIIMNAVLIEQEFLTEALPVKLIGMN 317 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G ++K ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQR 372 >gi|1710398|sp|P50650|RIR2_PLAF4 RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase R2 subunit; AltName: Full=Ribonucleotide reductase small subunit gi|555613|gb|AAA50170.1| ribonucleotide reductase small subunit [Plasmodium falciparum] Length = 349 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 69/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + + + P +Q + ++ EA +E ++ E++P +G+N Sbjct: 224 RDEGLHTDFNCLIYSLLDNKLP-------EQIIQNIVKEAVEVERSFICESLPCDLIGMN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G +F +++NPF WM ++I L+ + NFFE RV +YQ+ Sbjct: 277 SRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWM-DLISLQGKTNFFEKRVADYQKSG 333 >gi|148232385|ref|NP_001085389.1| ribonucleotide reductase M2, gene 1 [Xenopus laevis] gi|48735122|gb|AAH72071.1| MGC78958 protein [Xenopus laevis] Length = 406 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 68/117 (58%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K +Q+ R ++ +A +E + E +P +G+N Sbjct: 281 RDEGLHTDFACLLFK-------HVVHKPSEQRVREIIIDAVKIEQEFLTEALPVELIGMN 333 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G + +FK +ENPF +M E I L+ + NFFE +V EYQ+ Sbjct: 334 CTLMKQYIEFVADRLLLELGFKKIFK-SENPFDFM-ENISLEGKTNFFEKKVGEYQK 388 >gi|325478871|gb|EGC81981.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus prevotii ACS-065-V-Col13] Length = 352 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 4/123 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +IN ++ E L+TKE ++ R ML E EIA+ + GL+ Sbjct: 224 RDENTHLWLFRSLINDLRKEREDLFTKEHKEYYRNMLKEGVEQEIAWGKYAIGDNIAGLS 283 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 E Y++++ N R +GLE L++ YTE P W+ E D K +FFE +VT Y Sbjct: 284 EKMIEDYIKYLGNLRAKGLGLEALYEGYTEIPDSMKWVDEYSDPNAVKTDFFEAKVTAYS 343 Query: 118 QGA 120 + + Sbjct: 344 KSS 346 >gi|327261311|ref|XP_003215474.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like isoform 2 [Anolis carolinensis] Length = 390 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A +E + E +P +G+N Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPSEERVREIITNAVRIEQEFLTEALPVNLIGMN 317 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G ++K ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 318 CTLMKQYIEFVADRLILELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQR 372 >gi|76630263|ref|XP_880783.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 3 [Bos taurus] gi|297480612|ref|XP_002691528.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 2 [Bos taurus] gi|296482362|gb|DAA24477.1| ribonucleotide reductase M2 polypeptide isoform 2 [Bos taurus] Length = 341 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N Sbjct: 216 RDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMN 268 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 269 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 323 >gi|2500209|sp|Q60561|RIR2_MESAU RecName: Full=Ribonucleoside-diphosphate reductase subunit M2; AltName: Full=Ribonucleotide reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|49650|emb|CAA48232.1| ribonucleotide reductase [Mesocricetus auratus] Length = 386 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPSEQRVQEIITNAVRIEQEFLTEALPVKLIGMN 317 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +FK ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIFK-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 372 >gi|297805560|ref|XP_002870664.1| ribonucleoside-diphosphate reductase [Arabidopsis lyrata subsp. lyrata] gi|297316500|gb|EFH46923.1| ribonucleoside-diphosphate reductase [Arabidopsis lyrata subsp. lyrata] Length = 333 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 68/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ TK +++ ++++ +A +E + + +P VG+N Sbjct: 201 RDEGLHCDFACLIYSLLR-------TKLDEERLKSIVCDAVEIEREFVCDALPCALVGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R +G ++ + NPF WM E+I L+ + NFFE RV EYQ+ + Sbjct: 254 RELMSQYIEFVADRLLTALGCGKVYGVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKAS 310 >gi|327261309|ref|XP_003215473.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like isoform 1 [Anolis carolinensis] Length = 394 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A +E + E +P +G+N Sbjct: 269 RDEGLHCDFACLMFK-------HLVHKPSEERVREIITNAVRIEQEFLTEALPVNLIGMN 321 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G ++K ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 322 CTLMKQYIEFVADRLILELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQR 376 >gi|70936723|ref|XP_739266.1| ribonucleotide reductase small subunit [Plasmodium chabaudi chabaudi] gi|56516136|emb|CAH80811.1| ribonucleotide reductase small subunit, putative [Plasmodium chabaudi chabaudi] Length = 349 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 70/119 (58%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ + P ++ + ++ EA +E ++ E++P +G+N Sbjct: 224 RDEGLHTDFNCLIYSLLENKLP-------EEVVQNIVKEAVEVERSFICESLPCDLIGMN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G +F +++NPF WM ++I L+ + NFFE RV +YQ+ Sbjct: 277 SRLMSQYIEFVADRLLECLGCSKVF-HSKNPFSWM-DLISLQGKTNFFEKRVADYQKSG 333 >gi|257456224|ref|ZP_05621421.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema vincentii ATCC 35580] gi|257446310|gb|EEV21356.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema vincentii ATCC 35580] Length = 351 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 68/128 (53%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I++++ E P L+T E + R+M+ E EIA+ H + GL Sbjct: 223 RDENTHLWLFRSIIHELQKEEPQLFTPENNELFRSMIREGCEQEIAWGHYVIGDDIPGLT 282 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y+Q++ N RC +G EPL++ + E P W+S+ + K +FFE + T Y Sbjct: 283 RGMVTDYIQYLGNLRCENLGFEPLYEGHREEPASMSWVSQYSNANLIKTDFFEAKSTAYA 342 Query: 118 QGAELKWD 125 + + LK D Sbjct: 343 KSSALKDD 350 >gi|88682973|gb|AAI05512.1| RRM2 protein [Bos taurus] Length = 338 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N Sbjct: 213 RDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMN 265 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 266 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 320 >gi|327261313|ref|XP_003215475.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like isoform 3 [Anolis carolinensis] Length = 391 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A +E + E +P +G+N Sbjct: 266 RDEGLHCDFACLMFK-------HLVHKPSEERVREIITNAVRIEQEFLTEALPVNLIGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G ++K ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 319 CTLMKQYIEFVADRLILELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQR 373 >gi|302833193|ref|XP_002948160.1| hypothetical protein VOLCADRAFT_101784 [Volvox carteri f. nagariensis] gi|300266380|gb|EFJ50567.1| hypothetical protein VOLCADRAFT_101784 [Volvox carteri f. nagariensis] Length = 354 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 9/124 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL + +++ ++ EA LE + E + +G+N Sbjct: 219 RDEGLHCDFACCLYG-------HLKNRLSRERVVKIVDEAVRLEDEFCTEALSCELLGMN 271 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G + + T NPF WM E+I L+ + NFFE RV EYQ+ Sbjct: 272 ADLMRQYIRFVADRLLVSLGYDKYYN-TVNPFDWM-EMISLQGKANFFERRVGEYQRACV 329 Query: 122 LKWD 125 + D Sbjct: 330 MAGD 333 >gi|326386063|ref|ZP_08207687.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium nitrogenifigens DSM 19370] gi|326209288|gb|EGD60081.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium nitrogenifigens DSM 19370] Length = 351 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 2/121 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDE+LH GI + Q ++ TK ++ + LE A+ +G V G Sbjct: 189 VRDETLHCE-GITRLFQAFVQERDCMTKAVREDIIDCCQKTVRLEDAFIDLAFEQGPVPG 247 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 ++A ++Y+++IA+ R Q+G +P++ E+P PW++ +++ + NFFETR TEY + Sbjct: 248 MSAKEIKRYIRYIADWRLGQLGFQPIYMIEEHPLPWLTPLLNGVEHANFFETRATEYSKA 307 Query: 120 A 120 A Sbjct: 308 A 308 >gi|198420293|ref|XP_002130242.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase subunit M2 (Ribonucleotide reductase small subunit) (Ribonucleotide reductase small chain) [Ciona intestinalis] Length = 393 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K + + ++ +A +E + + +P +G+N Sbjct: 268 RDEGLHCDFACLMFK-------HLLHKPSEARVVEIVKDAVTIEQEFLTDALPVALIGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+A+R ++G +FK ENPF +M E+I L+ + NFFE RV EYQ+ Sbjct: 321 NKLMKQYIEFVADRLLVELGCSKVFK-VENPFDFM-ELISLEGKTNFFEKRVGEYQKAG 377 >gi|160881347|ref|YP_001560315.1| ribonucleoside-diphosphate reductase [Clostridium phytofermentans ISDg] gi|160430013|gb|ABX43576.1| Ribonucleoside-diphosphate reductase [Clostridium phytofermentans ISDg] Length = 342 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 70/126 (55%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL +++ ++++E ++TK +++ R M+ EIA+ +G+N Sbjct: 214 RDEITHLVLFQNIMKELRVEQKEMFTKGLEEELREMMRTGVEHEIAWGQYVTDNQILGIN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 +QY+++++N+R +GLE L+ + T++P W+ ++ K +FFE +VT Y + Sbjct: 274 NELIDQYIKYLSNQRLRAVGLEILYPEITKHPMEWIESFSNINSTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AVFDFD 339 >gi|20809684|gb|AAH28932.1| Similar to ribonucleotide reductase protein r2 class I [Homo sapiens] Length = 172 Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A +E + E +P +G+N Sbjct: 47 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 99 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 100 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 154 >gi|58260834|ref|XP_567827.1| ribonucleotide reductase small subunit [Cryptococcus neoformans var. neoformans JEC21] gi|134117207|ref|XP_772830.1| hypothetical protein CNBK2010 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255448|gb|EAL18183.1| hypothetical protein CNBK2010 [Cryptococcus neoformans var. neoformans B-3501A] gi|57229908|gb|AAW46310.1| ribonucleotide reductase small subunit, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 430 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 9/118 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + N +K T E ++ EA ++E + + +P +G+N Sbjct: 294 RDEGMHTDFACLLYNHLK---HRCSTDEVHH----IVSEALVIEKQFLTDALPCALIGIN 346 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 A QYM+F+A+R +G ++ T NPF WM E+I L+ + NFFE+RV+ YQ+ Sbjct: 347 AHLMCQYMEFVADRLVVDLGYPKIYNAT-NPFDWM-ELISLQGKANFFESRVSAYQKA 402 >gi|242076364|ref|XP_002448118.1| hypothetical protein SORBIDRAFT_06g021460 [Sorghum bicolor] gi|241939301|gb|EES12446.1| hypothetical protein SORBIDRAFT_06g021460 [Sorghum bicolor] Length = 339 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K + + R ++ +A +E + + +P VG+N Sbjct: 209 RDEGLHCDFACLLYDLLR-------GKLDESRVREIVADAVDIEREFVCDALPVALVGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R +G + ++ NPF WM E+I L+ + NFFE RV EYQ+ + Sbjct: 262 GALMSQYIEFVADRLLMALGHKKMYN-VANPFDWM-ELISLQGKTNFFEKRVGEYQKAS 318 >gi|125554800|gb|EAZ00406.1| hypothetical protein OsI_22421 [Oryza sativa Indica Group] Length = 244 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K + + R ++ +A +E + + +P VG+N Sbjct: 114 RDEGLHCDFACLLYDLLR-------GKLDEARVREIVADAVDIEREFVCDALPVALVGMN 166 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R +G + ++ NPF WM E+I L+ + NFFE RV +YQ+ + Sbjct: 167 GDLMSQYIEFVADRLLMALGCKKMYN-VANPFDWM-ELISLQGKTNFFEKRVGDYQKAS 223 >gi|255536887|ref|XP_002509510.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus communis] gi|223549409|gb|EEF50897.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus communis] Length = 329 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +K K +++ + ++ +A +E + + +P VG+N Sbjct: 200 RDEGLHCDFACLIYSLLK-------KKLSEERVKGIVRDAVNIEREFVCDALPCALVGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R +G + + NPF WM E+I L+ + NFFE RV EYQ+ A Sbjct: 253 GELMSQYIEFVADRLLGALGCGKEYNVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKAA 309 >gi|296421312|ref|XP_002840209.1| hypothetical protein [Tuber melanosporum Mel28] gi|295636423|emb|CAZ84400.1| unnamed protein product [Tuber melanosporum] Length = 397 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N HL + QQ + ++ EA +E + E +P +G+N Sbjct: 262 RDEGLHTDFACLLFN-------HLNNRPSQQAVQDIIVEAVGIEQEFLTEALPCALLGMN 314 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + +QY++F+A+R +G P F NPF +M E I L + NFFE RV +YQ+ Sbjct: 315 SKLMKQYIEFVADRLLLSLG-NPKFYNATNPFDFM-ESISLAGKTNFFEKRVGDYQKAG 371 >gi|224055741|ref|XP_002298630.1| predicted protein [Populus trichocarpa] gi|222845888|gb|EEE83435.1| predicted protein [Populus trichocarpa] Length = 329 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ EA +E + +++P VG+N Sbjct: 200 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKEAVDIEREFVVDSLPCALVGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EYQ+ + Sbjct: 253 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFFEKRVGEYQKAS 309 >gi|126322530|ref|XP_001380256.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 361 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 71/119 (59%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +L K +++ + ++ A +E + + +P G +G+N Sbjct: 236 RDEGLHCDFACLMFH-------YLVNKPSEERVKEIIINAVEIEQEFLTDALPVGLIGIN 288 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + +QY++F+A+R ++G +F+ ++NPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 289 STLMKQYIEFVADRLLVELGFSKVFQ-SDNPFDFM-ENISLEGKTNFFEKRVSEYQRFA 345 >gi|77748199|gb|AAI06683.1| MGC78958 protein [Xenopus laevis] Length = 406 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 68/117 (58%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K +Q+ R ++ +A +E + E +P +G+N Sbjct: 281 RDEGLHTDFACLLFK-------HVVHKPSEQRVREIIIDAVKIEQEFLIEALPVELIGMN 333 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G + +FK +ENPF +M E I L+ + NFFE +V EYQ+ Sbjct: 334 CTLMKQYIEFVADRLLLELGFKKIFK-SENPFDFM-ENISLEGKTNFFEKKVGEYQK 388 >gi|76630259|ref|XP_584910.2| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos taurus] gi|297480610|ref|XP_002691527.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos taurus] gi|296482361|gb|DAA24476.1| ribonucleotide reductase M2 polypeptide isoform 1 [Bos taurus] Length = 389 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N Sbjct: 264 RDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMN 316 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 317 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 371 >gi|75224904|sp|Q6Y657|RIR2B_ARATH RecName: Full=Putative ribonucleoside-diphosphate reductase small chain B; AltName: Full=Ribonucleoside-diphosphate reductase R2B subunit; AltName: Full=Ribonucleotide reductase small subunit B gi|37729626|gb|AAO62422.1| ribonucleotide reductase small subunit [Arabidopsis thaliana] Length = 333 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ TK + + + ++ +A +E + + +P VG+N Sbjct: 201 RDEGLHCDFACLIYSLLR-------TKLDEDRLKAIVCDAVEIEREFVCDALPCALVGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R +G ++ + NPF WM E+I L+ + NFFE RV EYQ+ + Sbjct: 254 RELMSQYIEFVADRLLAALGCAKVYGVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKAS 310 >gi|225010999|ref|ZP_03701465.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium MS024-3C] gi|225004906|gb|EEG42862.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium MS024-3C] Length = 328 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 69/124 (55%), Gaps = 8/124 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H ++ + + N HL K + + R +L +A +E + E++P +G+N Sbjct: 199 RDEGMHCDYAV------HLHNHHLINKVPKARIREILVDALNIERTFITESLPASLIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+ +R ++ E + + NPF +M ++I L+ + NFFE RV+EYQ+ Sbjct: 253 AKLMTQYLEFVTDRLLVELQCEKEYNVS-NPFDFM-DMISLQGKTNFFEKRVSEYQKAGV 310 Query: 122 LKWD 125 L D Sbjct: 311 LNKD 314 >gi|218289144|ref|ZP_03493380.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus acidocaldarius LAA1] gi|218240727|gb|EED07906.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus acidocaldarius LAA1] Length = 345 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++ ++I ENP + T + +++ M+ A EIA+ VGL Sbjct: 218 RDELTHLAIFRNLYHEIVRENPGIVTPDMEEEFVEMMRTAVQHEIAWGQYVTQGKIVGLT 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 + Y++++AN R + L L+ + E+P PWM + K +FFE RVT Y + Sbjct: 278 DALIDAYIKYLANLRLQSLNLPILYPEIKEHPMPWMDSFAAINSHKTDFFEQRVTNYTKA 337 Query: 120 AELKWD 125 L WD Sbjct: 338 GNLNWD 343 >gi|156847978|ref|XP_001646872.1| hypothetical protein Kpol_2002p85 [Vanderwaltozyma polyspora DSM 70294] gi|156117553|gb|EDO19014.1| hypothetical protein Kpol_2002p85 [Vanderwaltozyma polyspora DSM 70294] Length = 400 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 43/120 (35%), Positives = 67/120 (55%), Gaps = 11/120 (9%) Query: 2 RDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 RDE LH +F + + IK + +P + K ++ EA +E Y + +P +G+ Sbjct: 270 RDEGLHTDFACLLFSHIKNKPDPAIVEK--------IVTEAVEIEKRYFTDALPVALLGM 321 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA QY++F+A+R G E +FK ENPF +M E I L + NFFE RV++YQ+ + Sbjct: 322 NADLMNQYVEFVADRLLVAFGNEKVFK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAS 379 >gi|68069763|ref|XP_676793.1| ribonucleotide reductase small subunit [Plasmodium berghei strain ANKA] gi|56496646|emb|CAI04349.1| ribonucleotide reductase small subunit, putative [Plasmodium berghei] Length = 158 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 70/119 (58%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ + P ++ + ++ EA +E ++ E++P +G+N Sbjct: 33 RDEGLHTDFNCLIYSLLENKLP-------EEVVQNIVKEAVEVERSFICESLPCDLIGMN 85 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G +F +++NPF WM ++I L+ + NFFE RV +YQ+ Sbjct: 86 SRLMSQYIEFVADRLLECLGCSKVF-HSKNPFNWM-DLISLQGKTNFFEKRVADYQKSG 142 >gi|193784694|dbj|BAG53847.1| unnamed protein product [Homo sapiens] gi|193787382|dbj|BAG52588.1| unnamed protein product [Homo sapiens] Length = 297 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A +E + E +P +G+N Sbjct: 172 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 224 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 225 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 279 >gi|89890041|ref|ZP_01201552.1| ribonucleoside-diphosphate reductase small chain [Flavobacteria bacterium BBFL7] gi|89518314|gb|EAS20970.1| ribonucleoside-diphosphate reductase small chain [Flavobacteria bacterium BBFL7] Length = 330 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 68/119 (57%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + N HL K +++ ++ +A +E + E++P +G+N Sbjct: 199 RDEGMHCDFAV------HLHNHHLVNKVPKERITEIIVDALNIEREFITESLPASLIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+ +R ++ +P++ T NPF +M ++I ++ + NFFE RV EYQ+ Sbjct: 253 AKLMTQYLEFVTDRLLGELECDPVYNVT-NPFDFM-DLIGMEGKTNFFEKRVGEYQKAG 309 >gi|227541|prf||1706181A ribonucleotide reductase Length = 290 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A +E + E +P +G+N Sbjct: 165 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 217 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 218 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 272 >gi|71043760|ref|NP_001020911.1| ribonucleoside-diphosphate reductase subunit M2 [Rattus norvegicus] gi|77416595|sp|Q4KLN6|RIR2_RAT RecName: Full=Ribonucleoside-diphosphate reductase subunit M2; AltName: Full=Ribonucleotide reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|68533806|gb|AAH99082.1| Ribonucleotide reductase M2 [Rattus norvegicus] gi|149051013|gb|EDM03186.1| rCG61374 [Rattus norvegicus] Length = 390 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ + ++ + +E + E +P +G+N Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIITNSVRIEQEFLTEALPVKLIGMN 317 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +FK ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIFK-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 372 >gi|52077136|dbj|BAD46182.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group] gi|52077275|dbj|BAD46317.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group] gi|186920364|gb|ACC95435.1| ribonucleotide diphosphate reductase small subunit 1 [Oryza sativa Japonica Group] Length = 339 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K + + R ++ +A +E + + +P VG+N Sbjct: 209 RDEGLHCDFACLLYDLLR-------GKLDEARVREIVADAVDIEREFVCDALPVALVGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R +G + ++ NPF WM E+I L+ + NFFE RV +YQ+ + Sbjct: 262 GDLMSQYIEFVADRLLMALGCKKMYN-VANPFDWM-ELISLQGKTNFFEKRVGDYQKAS 318 >gi|258511567|ref|YP_003185001.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478293|gb|ACV58612.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 369 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++ ++I ENP + T + +++ M+ A EIA+ VGL Sbjct: 242 RDELTHLAIFRNLYHEIIRENPGIVTPDMEEEFVEMMRTAVQHEIAWGQYVTQGKIVGLT 301 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 + Y++++AN R + L L+ + E+P PWM + K +FFE RVT Y + Sbjct: 302 DALIDAYIKYLANLRLQSLNLPILYPEIKEHPMPWMDSFAAINSHKTDFFEQRVTNYTKA 361 Query: 120 AELKWD 125 L WD Sbjct: 362 GNLNWD 367 >gi|226528734|ref|NP_001150842.1| ribonucleoside-diphosphate reductase small chain [Zea mays] gi|195642302|gb|ACG40619.1| ribonucleoside-diphosphate reductase small chain [Zea mays] Length = 339 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++ K + + R ++ +A +E + + +P VG+N Sbjct: 209 RDEGLHCDFACLLYELLR-------NKLDEARVREIVADAVDIEREFVCDALPVALVGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R +G + ++ T NPF WM E+I L + NFFE RV +YQ+ + Sbjct: 262 GDLMSQYIEFVADRLLMALGCKKMYNVT-NPFDWM-ELISLMGKTNFFEKRVGDYQKAS 318 >gi|301166951|emb|CBW26530.1| putative ribonucleoside-diphosphate reductase small chain subunit [Bacteriovorax marinus SJ] Length = 322 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 13/124 (10%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTM---LHEATLLEIAYAHETMPKGFV 58 RDE LH F + L T E Q T+ + EA +E + E +P + Sbjct: 195 RDEGLHCEFACHI--------HELLTPEEQLNKETITQIITEAVSIEKEFITEAIPVSLI 246 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 G+NA +Y++F+A+ +++G E + TENPF WM E+I L+ + NFFE RV+EYQ+ Sbjct: 247 GMNADMMSRYIEFVADYWLNRLGCEKAYN-TENPFDWM-ELISLEGKTNFFEKRVSEYQK 304 Query: 119 GAEL 122 L Sbjct: 305 PGVL 308 >gi|145580571|pdb|2UW2|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase Subunit R2 Length = 332 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A +E + E +P +G+N Sbjct: 207 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 259 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 260 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 314 >gi|9634266|ref|NP_037805.1| ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera exigua MNPV] gi|6960505|gb|AAF33575.1|AF169823_45 ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera exigua MNPV] Length = 313 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 14/120 (11%) Query: 2 RDESLHLNFGIDVIN---QIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58 RDE LH NF N K++ P + M EA +E+ + E +P+ V Sbjct: 191 RDEGLHTNFACLYYNTRVDQKLDAPTV---------NDMFSEAVAIEMEFFAEALPESLV 241 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 G+NA +Y++F+A+R Q+ P YTENPF +M+ I L+ + NFFE RV EY++ Sbjct: 242 GMNANMMRKYIEFVADRLLVQLKY-PKMYYTENPFEFMNN-ISLEGKTNFFEKRVGEYKR 299 >gi|163784572|ref|ZP_02179421.1| ribonucleotide-diphosphate [Hydrogenivirga sp. 128-5-R1-1] gi|159880158|gb|EDP73813.1| ribonucleotide-diphosphate [Hydrogenivirga sp. 128-5-R1-1] Length = 139 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 3/116 (2%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60 DESLHL GI+ I I ENP + +F + R + +A LE+ Y + G+ Sbjct: 22 DESLHLQNGIEAILTIIEENPEIVDDIKFVENIRDTIIDAVELELNYLKTKFGGTTIFGV 81 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 + E YM++IA+RR ++G +P F +NP ++ + D+KK NFFE TEY Sbjct: 82 SYKELEMYMKYIADRRLEELGFDPQFNIQQNPLKFLQKE-DVKKLTNFFEVSSTEY 136 >gi|73979721|ref|XP_540076.2| PREDICTED: similar to Ribonucleoside-diphosphate reductase M2 chain (Ribonucleotide reductase small chain) isoform 1 [Canis familiaris] Length = 394 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N Sbjct: 269 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIIINAVRIEQEFLTEALPVKLIGMN 321 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 322 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 376 >gi|296271635|ref|YP_003654266.1| ribonucleoside-diphosphate reductase [Arcobacter nitrofigilis DSM 7299] gi|296095810|gb|ADG91760.1| Ribonucleoside-diphosphate reductase [Arcobacter nitrofigilis DSM 7299] Length = 339 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN + E P L+T E + K R M +A LE A+ +G Sbjct: 215 RDEVTHLLLFQNMINSTRKERPDLFTPELEVKVRAMFRKAVELEAAWGAYITQGQILGFT 274 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 QY+Q++A++R +G +P + ++P PW+ ++ NFFE V Y +G+ Sbjct: 275 DGIITQYIQYLADKRLDAVGYKPEYN-VKHPIPWVDGYSSFNDQRTNFFEGNVVNYSKGS 333 >gi|4557845|ref|NP_001025.1| ribonucleoside-diphosphate reductase subunit M2 isoform 2 [Homo sapiens] gi|400979|sp|P31350|RIR2_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase subunit M2; AltName: Full=Ribonucleotide reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|36155|emb|CAA42181.1| small subunit ribonucleotide reductase [Homo sapiens] gi|251637|gb|AAA09577.1| ribonucleotide reductase R2 subunit [Homo sapiens] gi|12804875|gb|AAH01886.1| Ribonucleotide reductase M2 polypeptide [Homo sapiens] gi|14029165|gb|AAK51163.1| ribonucleotide reductase M2 subunit [Homo sapiens] gi|20988810|gb|AAH30154.1| Ribonucleotide reductase M2 polypeptide [Homo sapiens] gi|62702173|gb|AAX93099.1| unknown [Homo sapiens] gi|123981920|gb|ABM82789.1| ribonucleotide reductase M2 polypeptide [synthetic construct] gi|123996753|gb|ABM85978.1| ribonucleotide reductase M2 polypeptide [synthetic construct] gi|189053955|dbj|BAG36462.1| unnamed protein product [Homo sapiens] gi|261861600|dbj|BAI47322.1| ribonucleotide reductase M2 [synthetic construct] Length = 389 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A +E + E +P +G+N Sbjct: 264 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 316 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 317 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 371 >gi|162147608|ref|YP_001602069.1| ribonucleotide-diphosphate reductase subunit beta [Gluconacetobacter diazotrophicus PAl 5] gi|209542240|ref|YP_002274469.1| ribonucleotide-diphosphate reductase subunit beta [Gluconacetobacter diazotrophicus PAl 5] gi|161786185|emb|CAP55767.1| putative ribonucleotide reductase small subunit [Gluconacetobacter diazotrophicus PAl 5] gi|209529917|gb|ACI49854.1| Ribonucleoside-diphosphate reductase [Gluconacetobacter diazotrophicus PAl 5] Length = 353 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 1/121 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDE+LH + ENP +WT + + + E A+ G V G Sbjct: 213 VRDETLHCLSMARLFRVFIQENPEIWTDALRADIVQICRDIVEHEDAFIDLCFEMGPVEG 272 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L+ + Y++FIA+RR + +GL+ ++ NP PW+ ++++ + NFFE R TEY + Sbjct: 273 LDGDLVKTYIRFIADRRLNLLGLDGIYDVPSNPLPWVDDMLNAVEHTNFFENRSTEYSRA 332 Query: 120 A 120 + Sbjct: 333 S 333 >gi|149728153|ref|XP_001502384.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase subunit M2 (Ribonucleotide reductase small subunit) (Ribonucleotide reductase small chain) [Equus caballus] Length = 425 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N Sbjct: 300 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIIINAVRIEQEFLTEALPVRLIGMN 352 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 353 CALMKQYIEFVADRLLLELGFNKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 407 >gi|212274629|ref|NP_001130908.1| hypothetical protein LOC100192012 [Zea mays] gi|195636980|gb|ACG37958.1| ribonucleoside-diphosphate reductase small chain [Zea mays] Length = 339 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K + + R ++ +A +E + + +P VG+N Sbjct: 209 RDEGLHCDFACLLYDLLR-------GKLDESRVREIVADAVDIEREFVCDALPVALVGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EYQ+ + Sbjct: 262 GGLMSQYIEFVADRLLMALGHRKMYN-VANPFDWM-ELISLQGKTNFFEKRVGEYQKAS 318 >gi|103487260|ref|YP_616821.1| ribonucleotide-diphosphate reductase subunit beta [Sphingopyxis alaskensis RB2256] gi|98977337|gb|ABF53488.1| Ribonucleoside-diphosphate reductase [Sphingopyxis alaskensis RB2256] Length = 354 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 2/121 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDESLH I + + E L TK ++ + LE A+ +G V G Sbjct: 189 IRDESLHCEGIIKLFHAFTKERGCL-TKAVKEDIIDTCQKTVRLEDAFIDLAFEQGPVPG 247 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + ++Y+++IA+ R Q+G +P++ E+P PW++ +++ + NFFETR TEY +G Sbjct: 248 MTPKEIKRYIRYIADWRLGQLGFQPIYMIDEHPLPWLAPLLNGVEHANFFETRATEYSKG 307 Query: 120 A 120 A Sbjct: 308 A 308 >gi|260064013|ref|NP_001159403.1| ribonucleoside-diphosphate reductase subunit M2 isoform 1 [Homo sapiens] Length = 449 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A +E + E +P +G+N Sbjct: 324 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 376 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 377 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 431 >gi|194690416|gb|ACF79292.1| unknown [Zea mays] gi|194704028|gb|ACF86098.1| unknown [Zea mays] gi|195619132|gb|ACG31396.1| ribonucleoside-diphosphate reductase small chain [Zea mays] gi|223943167|gb|ACN25667.1| unknown [Zea mays] Length = 339 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K + + R ++ +A +E + + +P VG+N Sbjct: 209 RDEGLHCDFACLLYDLLR-------GKLDESRVREIVADAVDIEREFVCDALPVALVGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EYQ+ + Sbjct: 262 GGLMSQYIEFVADRLLMALGHRKMYN-VANPFDWM-ELISLQGKTNFFEKRVGEYQKASV 319 Query: 122 LK 123 + Sbjct: 320 MS 321 >gi|297668213|ref|XP_002812343.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like [Pongo abelii] Length = 449 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A +E + E +P +G+N Sbjct: 324 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 376 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 377 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 431 >gi|119621373|gb|EAX00968.1| hCG23833, isoform CRA_b [Homo sapiens] gi|119621374|gb|EAX00969.1| hCG23833, isoform CRA_b [Homo sapiens] Length = 449 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A +E + E +P +G+N Sbjct: 324 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 376 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 377 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 431 >gi|225451453|ref|XP_002269951.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|147804660|emb|CAN64484.1| hypothetical protein VITISV_012640 [Vitis vinifera] Length = 329 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 67/119 (56%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ ++ +E + + +P VG+N Sbjct: 200 RDEGLHCDFACLLYSLLR-------NKLSEERVKAIVADSVDIEREFVCDALPCALVGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G ++ + NPF WM E+I L+ + NFFE RV EYQ+ + Sbjct: 253 SALMSQYIEFVADRLLGALGYGKMYNVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKAS 309 >gi|75076796|sp|Q4R7Q7|RIR2_MACFA RecName: Full=Ribonucleoside-diphosphate reductase subunit M2; AltName: Full=Ribonucleotide reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|67969020|dbj|BAE00865.1| unnamed protein product [Macaca fascicularis] Length = 389 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A +E + E +P +G+N Sbjct: 264 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRVEQEFLTEALPVKLIGMN 316 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 317 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 371 >gi|149408710|ref|XP_001506085.1| PREDICTED: similar to 5,10-methenyltetrahydrofolate synthetase [Ornithorhynchus anatinus] Length = 394 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ + ++ A +E + E +P +G+N Sbjct: 269 RDEGLHCDFACLMFK-------HLVHKPSEERVKEIIINAVRIEQEFLTEALPVKLIGMN 321 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +FK ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 322 CTLMKQYIEFVADRLLLELGFSKIFK-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 376 >gi|82538850|ref|XP_723858.1| ribonucleotide reductase small chain [Plasmodium yoelii yoelii str. 17XNL] gi|145580416|pdb|2P1I|A Chain A, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2 (Py03671) gi|145580417|pdb|2P1I|B Chain B, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2 (Py03671) gi|145580418|pdb|2P1I|C Chain C, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2 (Py03671) gi|145580419|pdb|2P1I|D Chain D, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2 (Py03671) gi|145580420|pdb|2P1I|E Chain E, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2 (Py03671) gi|145580421|pdb|2P1I|F Chain F, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2 (Py03671) gi|145580422|pdb|2P1I|G Chain G, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2 (Py03671) gi|145580423|pdb|2P1I|H Chain H, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2 (Py03671) gi|23478298|gb|EAA15423.1| Ribonucleotide reductase, small chain [Plasmodium yoelii yoelii] Length = 349 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 69/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ + P + + ++ EA +E ++ E++P +G+N Sbjct: 224 RDEGLHTDFNCLIYSLLENKLP-------ENVVQNIVKEAVEVERSFICESLPCDLIGMN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G +F +++NPF WM ++I L+ + NFFE RV +YQ+ Sbjct: 277 SRLMSQYIEFVADRLLECLGCSKVF-HSKNPFNWM-DLISLQGKTNFFEKRVADYQKSG 333 >gi|149721713|ref|XP_001493623.1| PREDICTED: ribonucleotide reductase M2 B (TP53 inducible) [Equus caballus] Length = 351 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 67/119 (56%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ A +E + E +P +G+N Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVDLIGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 279 CVLMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335 >gi|316971821|gb|EFV55552.1| ribonucleotide reductase R2 subunit [Trichinella spiralis] Length = 366 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL K + + R ++ EA +E + + +P +G+N Sbjct: 241 RDEGLHCDFACLLYS-------HLKKKPTEDRVRQIITEAVSIEQEFLTDALPVRLIGMN 293 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++++A+R ++G ++ +ENPF +M E+I L+ + NFFE RV EYQ+ Sbjct: 294 CVLMSQYIEYVADRLLVELGCSKVYN-SENPFDFM-EMISLEGKTNFFEKRVGEYQKAG 350 >gi|159465291|ref|XP_001690856.1| ribonucleoside-diphosphate reductase small subunit [Chlamydomonas reinhardtii] gi|158279542|gb|EDP05302.1| ribonucleoside-diphosphate reductase small subunit [Chlamydomonas reinhardtii] Length = 493 Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +++ ++ EA LE + E + +G+N Sbjct: 360 RDEGLHCDFACCLYS-------HLKNRLSRERVLQIVDEAVQLEDEFCTEALSCELLGMN 412 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G E + T NPF WM E+I L+ + NFFE RV EYQ+ Sbjct: 413 ADLMRQYIRFVADRLLVSLGYEKHYN-TRNPFDWM-EMISLQGKANFFERRVGEYQRAG 469 >gi|38232564|gb|AAR15079.1| ribonucleotide reductase R2 subunit variant [Aedes albopictus] Length = 219 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K Q++ ++ EA L+E + + +P +G+N Sbjct: 94 RDEGLHTDFACLMF-------KYLVQKPSQERVIEIIREAVLIEQEFLTKALPVDLLGMN 146 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+R ++G++ ++ T+NPF +M E I L+ + NFFE +V EYQ+ Sbjct: 147 CELMSQYIEFVADRLLLELGIDKIYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQK 201 >gi|4894211|gb|AAD32302.1| ribonucleotide reductase small subunit [Glycine max] Length = 339 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ P + + ++HEA +E + + +P +G+N Sbjct: 210 RDEGLHCDFACLLYSLLR--KPLI-----SDQVHKLVHEAVEIETEFVCDALPCALIGMN 262 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G + + ENPF WM E I L+ + NFFE RV +YQ+ + Sbjct: 263 SVLMSQYIKFVADRLLVALGYQRKYN-VENPFDWM-EFISLQGKANFFERRVGDYQKAS 319 >gi|225320685|dbj|BAH29738.1| ribonucleoside-diphosphate reductase subunit M2 [Dicyema japonicum] Length = 337 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +K + P + + ++ EA +LE + E +P +G+N Sbjct: 209 RDEGLHTDFACLLYHHLKKKLP-------RDRILQIITEAVVLEKEFLTEALPVALIGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+R ++G + + Y +NPF +M E I L + NFFE RV EYQ+ Sbjct: 262 VNLMSQYIEFVADRLIIELGYDKHY-YAQNPFDFM-ENISLSGKTNFFEKRVGEYQR 316 >gi|209877302|ref|XP_002140093.1| ribonucleotide-diphosphate reductase, small subunit [Cryptosporidium muris RN66] gi|209555699|gb|EEA05744.1| ribonucleotide-diphosphate reductase, small subunit, putative [Cryptosporidium muris RN66] Length = 346 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +FG + + P+ +E ++ EA +E A+ +++P +G+N Sbjct: 221 RDEGIHADFGCLLYKTLNNRLPYGRVQE-------IIAEAVEVERAFLCDSLPVDLIGMN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R + + ++ T NPF WM ++I L+ + NFFE RV EYQ Sbjct: 274 SRLMAQYIEFVADRLLFALDVPKIYNVT-NPFDWM-DLISLQGKTNFFEKRVAEYQMAG 330 >gi|157126966|ref|XP_001654749.1| ribonucleoside-diphosphate reductase small chain [Aedes aegypti] gi|15638625|gb|AAL05057.1|AF411297_1 ribonucleotide reductase 2 [Aedes aegypti] gi|82469974|gb|ABB77235.1| ribonucleotide reductase small subunit R2 [Aedes aegypti] gi|108873070|gb|EAT37295.1| ribonucleoside-diphosphate reductase small chain [Aedes aegypti] Length = 397 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K Q++ ++ EA L+E + + +P +G+N Sbjct: 272 RDEGLHTDFACLMFK-------YLVQKPSQERVIEIIREAVLIEQEFLTKALPVDLLGMN 324 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+R ++G++ ++ T+NPF +M E I L+ + NFFE +V EYQ+ Sbjct: 325 CDLMSQYIEFVADRLLLELGIDKIYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQK 379 >gi|291412327|ref|XP_002722439.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Oryctolagus cuniculus] Length = 400 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N Sbjct: 275 RDEGLHCDFACLMFK-------HLVHKPSEQRVQEIIVNAVRIEQEFLTEALPVKLIGMN 327 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 328 CALMKQYIEFVADRLLLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 382 >gi|296082342|emb|CBI21347.3| unnamed protein product [Vitis vinifera] Length = 227 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 6/108 (5%) Query: 17 QIKIENPH----LWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFI 72 QI IEN H L K +++ + ++ ++ +E + + +P VG+N+ QY++F+ Sbjct: 102 QIAIENIHSEILLRNKLSEERVKAIVADSVDIEREFVCDALPCALVGMNSALMSQYIEFV 161 Query: 73 ANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A+R +G ++ + NPF WM E+I L+ + NFFE RV EYQ+ + Sbjct: 162 ADRLLGALGYGKMYNVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKAS 207 >gi|221060582|ref|XP_002260936.1| ribonucleotide reductase small subunit [Plasmodium knowlesi strain H] gi|193811010|emb|CAQ42908.1| ribonucleotide reductase small subunit,putative [Plasmodium knowlesi strain H] Length = 349 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 69/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ + P ++ + ++ EA +E ++ E++P +G+N Sbjct: 224 RDEGLHTDFNCLIYSLLENKLP-------EEVVQNIVKEAVEVERSFICESLPCDLIGMN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G +F + +NPF WM ++I L+ + NFFE RV +YQ+ Sbjct: 277 SRLMSQYIEFVADRLLECLGSRKIF-HAKNPFNWM-DLISLQGKTNFFEKRVADYQKSG 333 >gi|296282225|ref|ZP_06860223.1| ribonucleotide-diphosphate reductase subunit beta [Citromicrobium bathyomarinum JL354] Length = 354 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 69/123 (56%), Gaps = 6/123 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE---IAYAHETMPKGF 57 +RDESLH I + ++ + +TK ++ + ++ LE I A E P Sbjct: 189 VRDESLHCEGIIRLFHEF-VRERDCYTKAVKEDIIDICQKSVRLEDNFIDLAFEMGP--V 245 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 G+ A ++Y+++IA+ R Q+GL+P++ E+P PW++ +++ + NFFE R TEY Sbjct: 246 SGMTAKEIKKYIRYIADWRLGQLGLQPIYMIDEHPLPWLTPLLNGVEHANFFEQRATEYS 305 Query: 118 QGA 120 +GA Sbjct: 306 KGA 308 >gi|118383611|ref|XP_001024960.1| ribonucleoside-diphosphate reductase, beta subunit family protein [Tetrahymena thermophila] gi|89306727|gb|EAS04715.1| ribonucleoside-diphosphate reductase, beta subunit family protein [Tetrahymena thermophila SB210] Length = 376 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 9/118 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + + N L +E + ++ EA +E + E +P +G+N Sbjct: 251 RDEGLHTDFACLLYSML---NKKLTKEEIYE----IITEAVEIEKEFISEALPVELIGMN 303 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + +QY++F+A+R +G+ P F ++NPF WM ++I ++ + NFFE RV EYQ+ Sbjct: 304 SNMMKQYLEFVADRLLFALGV-PKFYNSKNPFEWM-DMISIQGKTNFFEKRVGEYQKA 359 >gi|332247270|ref|XP_003272776.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like isoform 2 [Nomascus leucogenys] gi|332247272|ref|XP_003272777.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like isoform 3 [Nomascus leucogenys] Length = 297 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A +E + E +P +G+N Sbjct: 172 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 224 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 225 CILMKQYIEFVADRLMLELGFGKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 279 >gi|260909050|gb|ACX54162.1| RR2 protein [Shrimp white spot syndrome virus] gi|260909052|gb|ACX54163.1| RR2 protein [Shrimp white spot syndrome virus] gi|260909054|gb|ACX54164.1| RR2 protein [Shrimp white spot syndrome virus] gi|260909056|gb|ACX54165.1| RR2 protein [Shrimp white spot syndrome virus] Length = 349 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 66/118 (55%), Gaps = 8/118 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F ++ + ++ P +++ ++ EA +E + ++P VG+N Sbjct: 235 RDEGLHRDFACMLLKKGFVDTPS------RERILEIVTEAVRIEQEFLTVSLPVKLVGMN 288 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 QY++F+A++ ++GLE + T NPFP+M I L+ + NFFE RV EYQ+ Sbjct: 289 CKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMDN-ISLENKTNFFEKRVAEYQRA 344 >gi|294945135|ref|XP_002784568.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus ATCC 50983] gi|239897674|gb|EER16364.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus ATCC 50983] Length = 238 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N + +T+ ++ ++ A +E + E++P +G+N Sbjct: 96 RDEGLHADFACLLYNMMH------YTRLPDERVHEIVRGAVDVERVFISESLPVSLIGMN 149 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + +Y++F+A+R +G L+ T NPF WM ++I L+ + NFFE RV EYQ+G Sbjct: 150 SQLMCRYIEFVADRLLVALGHPKLYNAT-NPFDWM-KMISLQGKTNFFEKRVGEYQKGG 206 >gi|73974202|ref|XP_858105.1| PREDICTED: similar to ribonucleotide reductase M2 B (TP53 inducible) isoform 4 [Canis familiaris] Length = 374 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 45/135 (33%), Positives = 73/135 (54%), Gaps = 18/135 (13%) Query: 2 RDESLHLNFG-------IDVINQIKIENPHLWTKEFQQKSRT--MLHEATLLEIA----- 47 RDE LH +F ++ ++ ++ + E +Q SR M+ + LEIA Sbjct: 226 RDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQVSREAYMISTSLFLEIATCRSK 285 Query: 48 --YAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE 105 + E +P G +G+N +QY++F+A+R ++G +F+ ENPF +M E I L+ + Sbjct: 286 HEFLTEALPVGLIGMNCVLMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGK 343 Query: 106 KNFFETRVTEYQQGA 120 NFFE RV EYQ+ A Sbjct: 344 TNFFEKRVAEYQRFA 358 >gi|126303832|ref|XP_001381111.1| PREDICTED: similar to hCG23833, [Monodelphis domestica] Length = 493 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++K + ++ A +E + E +P +G+N Sbjct: 368 RDEGLHCDFACLMFK-------HLVHKPSEEKVKEIIINAVRIEQEFLTEALPVKLIGMN 420 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 421 CTLMKQYIEFVADRLMLELGFSKIFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 475 >gi|66822029|ref|XP_644369.1| ribonucleotide reductase small subunit [Dictyostelium discoideum AX4] gi|66823381|ref|XP_645045.1| ribonucleotide reductase small subunit [Dictyostelium discoideum AX4] gi|41019487|sp|P42521|RIR2_DICDI RecName: Full=Ribonucleoside-diphosphate reductase small subunit; AltName: Full=Ribonucleotide reductase small subunit gi|29611978|gb|AAB72227.2| ribonucleotide reductase small subunit [Dictyostelium discoideum] gi|60472492|gb|EAL70444.1| ribonucleotide reductase small subunit [Dictyostelium discoideum AX4] gi|60472997|gb|EAL70945.1| ribonucleotide reductase small subunit [Dictyostelium discoideum AX4] Length = 338 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 67/118 (56%), Gaps = 11/118 (9%) Query: 2 RDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 RDE LH +F + +++ + +P + K M+ +A E + E++P +G+ Sbjct: 206 RDEGLHCDFACLLYTKLQRKLDPKVIEK--------MIRDAVECEKEFICESLPVDLIGM 257 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 N+ S QY++F A+R +G + +F + NPF WM E+I L+++ NFFE +V EY + Sbjct: 258 NSRSMSQYIEFCADRLVVSLGYKKIFN-SSNPFEWM-EMISLQRKSNFFEGKVAEYAK 313 >gi|330804590|ref|XP_003290276.1| hypothetical protein DICPUDRAFT_56591 [Dictyostelium purpureum] gi|325079602|gb|EGC33194.1| hypothetical protein DICPUDRAFT_56591 [Dictyostelium purpureum] Length = 335 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 13/119 (10%) Query: 2 RDESLHLNFGIDVINQI--KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59 RDE LH NF + ++ K+E+ L ++ +A + E + +++P +G Sbjct: 201 RDEGLHCNFACLLYTKLINKLESKTL---------EAIIRDAVVCEKEFICDSLPVDLIG 251 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +N+ S QY++F A+R +G + ++ NPF WM E+I L+++ NFFE +V EY + Sbjct: 252 MNSRSMSQYIEFCADRLLVSLGYKKIYN-ASNPFDWM-EMISLQRKTNFFEGKVAEYAK 308 >gi|302904131|ref|XP_003049009.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256729943|gb|EEU43296.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 389 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/121 (33%), Positives = 67/121 (55%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +Q + ++ +A +E + E +P +G+N Sbjct: 252 RDEGLHTDFAC-------LLHSHLKGRASKQVIQDIITDAVTIEQEFLTEALPCALLGMN 304 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A +QY++F+A+R +G E ++K + NPF +M E I L + NFFE RV +YQ+ Sbjct: 305 ADLMKQYIEFVADRLLVALGNEKVYK-SANPFDFM-ENISLGGKTNFFEKRVGDYQKAGV 362 Query: 122 L 122 L Sbjct: 363 L 363 >gi|224046583|ref|XP_002198998.1| PREDICTED: hypothetical protein [Taeniopygia guttata] Length = 362 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 67/119 (56%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +L + +++ ++ A +E + E +P G +G+N Sbjct: 237 RDEGLHCDFACLMFH-------YLVNRPSEERVCEIIVNAVEIEQEFLTEALPVGLIGMN 289 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 290 CTLMKQYIEFVADRLLMELGFSKVFN-VENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 346 >gi|7672989|gb|AAF66689.1|AF144620_1 ribonucleotide reductase small subunit [shrimp white spot syndrome virus] Length = 413 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 66/118 (55%), Gaps = 8/118 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F ++ + ++ P +++ ++ EA +E + ++P VG+N Sbjct: 250 RDEGLHRDFACMLLKKGFVDTPS------RERILEIVTEAVRIEQEFLTVSLPVKLVGMN 303 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 QY++F+A++ ++GLE + T NPFP+M I L+ + NFFE RV EYQ+ Sbjct: 304 CKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMDN-ISLENKTNFFEKRVAEYQRA 359 >gi|322693757|gb|EFY85606.1| ribonucleoside-diphosphate reductase M2 subunit [Metarhizium acridum CQMa 102] Length = 411 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +Q ++ +A +E + E +P +G+N Sbjct: 273 RDEGLHTDFAC-------LLHSHLKNRASKQIIHDIITDAVAIEKEFLTEALPCALLGMN 325 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +QY++F+A+R +G E ++K T NPF +M E I L + NFFE RV +YQ+ Sbjct: 326 SNLMKQYIEFVADRLLVALGNEKVYK-TSNPFDFM-ENISLGGKTNFFEKRVGDYQKAGV 383 Query: 122 L 122 L Sbjct: 384 L 384 >gi|46122063|ref|XP_385585.1| hypothetical protein FG05409.1 [Gibberella zeae PH-1] Length = 399 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/121 (33%), Positives = 67/121 (55%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +Q + ++ +A +E + E +P +G+N Sbjct: 262 RDEGLHTDFAC-------LLHSHLKGRASKQMIQDIITDAVSIEQEFLTEALPCALLGMN 314 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +QY++F+A+R +G E ++K T NPF +M E I L + NFFE RV +YQ+ Sbjct: 315 SNLMKQYIEFVADRLLVALGNEKVYKST-NPFDFM-ENISLGGKTNFFEKRVADYQKAGV 372 Query: 122 L 122 L Sbjct: 373 L 373 >gi|17158292|ref|NP_477710.1| wsv188 [Shrimp white spot syndrome virus] gi|14189948|gb|AAK55515.1|AF267731_1 ribonucleotide reductase small subunit [shrimp white spot syndrome virus] gi|15021490|gb|AAK77767.1|AF369029_98 ORF98, putative ribonucleotide reductase small subunit (RR2) [shrimp white spot syndrome virus] gi|17016586|gb|AAL33192.1| wsv188 [shrimp white spot syndrome virus] gi|19481835|gb|AAL89111.1| WSSV243 [shrimp white spot syndrome virus] Length = 413 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 66/118 (55%), Gaps = 8/118 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F ++ + ++ P +++ ++ EA +E + ++P VG+N Sbjct: 250 RDEGLHRDFACMLLKKGFVDTPS------RERILEIVTEAVRIEQEFLTVSLPVKLVGMN 303 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 QY++F+A++ ++GLE + T NPFP+M I L+ + NFFE RV EYQ+ Sbjct: 304 CKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMDN-ISLENKTNFFEKRVAEYQRA 359 >gi|89268988|emb|CAJ81953.1| ribonucleotide reductase m2 polypeptide [Xenopus (Silurana) tropicalis] gi|89269815|emb|CAJ81580.1| ribonucleotide reductase m2 polypeptide [Xenopus (Silurana) tropicalis] Length = 386 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ ++ +A +E + E +P +G+N Sbjct: 261 RDEGLHCDFACLMFK-------HLVNKPSEERVVQLITDAVQIEQEFLTEALPVNLIGMN 313 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +FK T NPF +M E I L+ + NFFE +V EYQ+ Sbjct: 314 CTLMKQYIEFVADRLLLELGFNKVFKAT-NPFDFM-ENISLEGKTNFFEKKVGEYQK 368 >gi|294890631|ref|XP_002773236.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus ATCC 50983] gi|239878288|gb|EER05052.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus ATCC 50983] Length = 350 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N + +T+ ++ ++ A +E + E++P +G+N Sbjct: 208 RDEGLHADFACLLYNMMH------YTRLPDERVHEIVRGAVDVERVFISESLPVSLIGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + +Y++F+A+R +G L+ T NPF WM ++I L+ + NFFE RV EYQ+G Sbjct: 262 SQLMCRYIEFVADRLLVALGHPKLYNAT-NPFDWM-KMISLQGKTNFFEKRVGEYQKGG 318 >gi|56118690|ref|NP_001007890.1| ribonucleotide reductase M2, gene 2 [Xenopus (Silurana) tropicalis] gi|51258920|gb|AAH80161.1| ribonucleotide reductase M2 polypeptide [Xenopus (Silurana) tropicalis] Length = 386 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ ++ +A +E + E +P +G+N Sbjct: 261 RDEGLHCDFACLMFK-------HLVNKPSEERVVQLITDAVQIEQEFLTEALPVNLIGMN 313 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +FK T NPF +M E I L+ + NFFE +V EYQ+ Sbjct: 314 CTLMKQYIEFVADRLLLELGFNKVFKAT-NPFDFM-ENISLEGKTNFFEKKVGEYQK 368 >gi|322709430|gb|EFZ01006.1| ribonucleoside-diphosphate reductase M2 subunit [Metarhizium anisopliae ARSEF 23] Length = 414 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +Q ++ +A +E + E +P +G+N Sbjct: 276 RDEGLHTDFAC-------LLHSHLKNRASKQVIYDIITDAVAIEQEFLTEALPCALLGMN 328 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +QY++F+A+R +G E ++K T NPF +M E I L + NFFE RV +YQ+ Sbjct: 329 SNLMKQYIEFVADRLLVALGNEKVYK-TSNPFDFM-ENISLGGKTNFFEKRVGDYQKAGV 386 Query: 122 L 122 L Sbjct: 387 L 387 >gi|332519182|ref|ZP_08395649.1| Ribonucleoside-diphosphate reductase [Lacinutrix algicola 5H-3-7-4] gi|332045030|gb|EGI81223.1| Ribonucleoside-diphosphate reductase [Lacinutrix algicola 5H-3-7-4] Length = 327 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 8/121 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + HL K +++ R +L +A +E + E++P +G+N Sbjct: 199 RDEGMHCDFAV------HLHEHHLINKVPKERIREILVDALNIEREFITESLPVSLIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+ + +G E + T NPF +M ++I L+ + NFFE RV+EYQ+ Sbjct: 253 SKLMSQYLEFVTDGLLQDLGCEKEYG-TANPFDFM-DMISLQGKTNFFEKRVSEYQKAGV 310 Query: 122 L 122 L Sbjct: 311 L 311 >gi|1710399|sp|P50649|RIR2_PLAFG RecName: Full=Ribonucleoside-diphosphate reductase small subunit; AltName: Full=Ribonucleotide reductase R2 subunit; AltName: Full=Ribonucleotide reductase small subunit gi|349790|gb|AAA29754.1| ribonucleotide reductase R2 subunit [Plasmodium falciparum] Length = 322 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 70/121 (57%), Gaps = 11/121 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEI--AYAHETMPKGFVG 59 RDE LH +F + + + + P +Q + ++ EA +E+ ++ E++P +G Sbjct: 195 RDEGLHTDFNCLIYSLLDNKLP-------EQMVQNIVKEAGGVEVEKSFICESLPCDLIG 247 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +N+ QY++F+A+R +G +F +++NPF WM ++I L+ + NFFE RV +YQ+ Sbjct: 248 MNSRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWM-DLISLQGKTNFFEKRVADYQKS 305 Query: 120 A 120 Sbjct: 306 G 306 >gi|145553335|ref|XP_001462342.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124430181|emb|CAK94969.1| unnamed protein product [Paramecium tetraurelia] Length = 355 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K Q+ ++ A +E + E +P +G+N Sbjct: 230 RDEGLHTDFAC-------LLYKHLVNKMSNQRIHEIISSAVEIEKEFISEALPVELIGMN 282 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + +QY++F+A+R +G ++ ++NPF WM ++I L+ + NFFE RV +YQ+ Sbjct: 283 SNLMKQYIEFVADRLIFALGAPKIYN-SKNPFEWM-DMISLQGKTNFFERRVGDYQKAG 339 >gi|167519412|ref|XP_001744046.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778008|gb|EDQ91624.1| predicted protein [Monosiga brevicollis MX1] Length = 329 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 68/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +K + P +++ ++ +A +E + +P G +G+N Sbjct: 204 RDEGLHTDFACLMFSMLK-KRPS------KERVTGIIMDAVEIEQDFLTNALPCGLLGMN 256 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A +QY++F+++R +G E +F +ENPF +M E I ++ + NFFE RV EYQ+ Sbjct: 257 ATLMKQYIEFVSDRLLVALGCEKIFN-SENPFDFM-ESISIEGKTNFFEKRVGEYQKAG 313 >gi|291244313|ref|XP_002742041.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like [Saccoglossus kowalevskii] Length = 463 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 67/118 (56%), Gaps = 9/118 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL K +++ R ++ +A +E + +E +P G +G+N Sbjct: 337 RDEGLHCDFACLIFS-------HLTYKPSKERIRNIITQAVDIEKEFWNEALPVGLIGMN 389 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 Y++F+A+R ++ + ++ + ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 390 VTLMNYYVEFVADRLLLELNCDKVY-HRENPFDFM-ENISLEGKTNFFEKRVGEYQKA 445 >gi|156102402|ref|XP_001616894.1| ribonucleoside-diphosphate reductase small chain [Plasmodium vivax SaI-1] gi|148805768|gb|EDL47167.1| ribonucleoside-diphosphate reductase small chain, putative [Plasmodium vivax] Length = 349 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 69/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ + P ++ + ++ EA +E ++ E++P +G+N Sbjct: 224 RDEGLHTDFNCLIYSLLENKLP-------EEVVQNIVKEAVEVERSFICESLPCDLIGMN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G +F + +NPF WM ++I L+ + NFFE RV +YQ+ Sbjct: 277 SRLMSQYIEFVADRLLECLGSPKIF-HAKNPFNWM-DLISLQGKTNFFEKRVADYQKSG 333 >gi|148234092|ref|NP_001079369.1| ribonucleotide reductase M2 B (TP53 inducible) [Xenopus laevis] gi|27371032|gb|AAH41209.1| MGC52676 protein [Xenopus laevis] Length = 386 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ ++ +A +E + E +P +G+N Sbjct: 261 RDEGLHCDFACLMFK-------HLIRKPSEERVVELITDAVQIEQEFLTEALPVNLIGMN 313 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G + +FK T NPF +M E I L+ + NFFE +V EYQ+ Sbjct: 314 CTLMKQYIEFVADRLLLELGFKKVFKAT-NPFDFM-ENISLEGKTNFFEKKVGEYQK 368 >gi|187903099|ref|YP_001883390.1| ribonucleoside diphosphate reductase small subunit, rr2 [Musca domestica salivary gland hypertrophy virus] gi|187384748|gb|ACD03521.1| ribonucleoside diphosphate reductase small subunit, rr2 [Musca domestica salivary gland hypertrophy virus] Length = 343 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 66/117 (56%), Gaps = 8/117 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + + + P +++ ++ EA +E + + +P +G+N Sbjct: 211 RDEGMHCDFAVLLFKRYLVNRPS------EERVGEIVREAVTIEQEFLTDALPVSLIGMN 264 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+R +G++ ++ T+NPF +M ++I L + NFFE RV +YQ+ Sbjct: 265 CGLMSQYIEFVADRLLVDLGMKRIYN-TKNPFDFM-DMISLDGKTNFFEKRVGDYQR 319 >gi|301117384|ref|XP_002906420.1| ribonucleoside-diphosphate reductase small chain [Phytophthora infestans T30-4] gi|262107769|gb|EEY65821.1| ribonucleoside-diphosphate reductase small chain [Phytophthora infestans T30-4] Length = 379 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 67/119 (56%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + +++ + P E + + T+ HE + +++P +G+N Sbjct: 254 RDEGMHTDFACLLYSKLVTKLPESRVHEIVRDAVTIEHE-------FVRDSLPVELIGMN 306 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R + +G+ ++ + +NPF WM ++I L+ + NFFE RV EY + Sbjct: 307 SGLMCQYIEFVADRLLYSLGVSKIY-HAKNPFDWM-DMISLQGKTNFFEKRVGEYSKAG 363 >gi|312889900|ref|ZP_07749444.1| Ribonucleoside-diphosphate reductase [Mucilaginibacter paludis DSM 18603] gi|311297432|gb|EFQ74557.1| Ribonucleoside-diphosphate reductase [Mucilaginibacter paludis DSM 18603] Length = 343 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 67/124 (54%), Gaps = 9/124 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H F + + + K ++ T++ +A +E + + +P +G+N Sbjct: 217 RDEGMHCEFACLLYSMLS-------NKLSKEAVTTIIADAVEIEKEFVTDALPVNLIGMN 269 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R ++G + L+ T NPF +M E+I L+ + NFFE RV +YQ+ Sbjct: 270 AKLMSQYIEFVADRWLQELGYDKLYHAT-NPFDFM-EMISLQGKTNFFEKRVGDYQKSGV 327 Query: 122 LKWD 125 L D Sbjct: 328 LNND 331 >gi|332247268|ref|XP_003272775.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like isoform 1 [Nomascus leucogenys] Length = 434 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A +E + E +P +G+N Sbjct: 309 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 361 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 362 CILMKQYIEFVADRLMLELGFGKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 416 >gi|291276761|ref|YP_003516533.1| ribonucleoside-diphosphate reductase subunit beta [Helicobacter mustelae 12198] gi|290963955|emb|CBG39794.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter mustelae 12198] Length = 344 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I +K E P L+ K+ +++ M A +E A+ +GL Sbjct: 221 RDEVTHLILFQNMIRTLKKERPDLFDKDLEEEIVEMFRRAVEIEAAWGEYITQGQILGLT 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 QY+Q++A++R ++G+ L+ E+P W+ + +++ NFFE +VT Y +G+ Sbjct: 281 GEVIHQYIQYLADQRLSKVGMPKLYN-VEHPIKWVEQYASFNEQRTNFFEAKVTNYAKGS 339 >gi|118474076|ref|YP_891239.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter fetus subsp. fetus 82-40] gi|118413302|gb|ABK81722.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter fetus subsp. fetus 82-40] Length = 340 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+T E + K M +A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFTSEVEAKIYEMFKKAGDLEIEWGKYITGNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 E+Y+ ++ + R IGL+ L+ ++P W+ + +K NFFE++VT Y +G+ Sbjct: 276 DDIIEEYIHYLVDDRLTSIGLKKLYN-AKHPIKWVDDFAKFNDQKSNFFESKVTNYSKGS 334 >gi|929959|gb|AAA74020.1| ribonuleotide reductase small subunit [Urechis caupo] Length = 399 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL K Q++ ++ +A +E ++ E +P +G+N Sbjct: 271 RDEGLHCDFACLMFS-------HLKNKPSQERVYDIIRDAVRIEQSFLTEALPVNLIGMN 323 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+R ++G P ENPF +M I L+ + NFFE RV EYQ+ Sbjct: 324 CKLMAQYIEFVADRLLLELGC-PKIWNVENPFDFMDN-ISLEGKTNFFEKRVGEYQK 378 >gi|168186576|ref|ZP_02621211.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum C str. Eklund] gi|169295422|gb|EDS77555.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum C str. Eklund] Length = 342 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I ++K EN ++T+ ++ R M+ EI + +G+N Sbjct: 214 RDEITHLILFQNIIKELKNENLDIFTESIIEEFRMMMKTGVEHEIKWGQYVTNNEILGIN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 E+Y+++++N R + IGLE L+ + TE+P W+ L K +FFE +VT Y + Sbjct: 274 NNLIEKYIKYLSNLRLNAIGLEVLYPEITEHPMEWIENFSKLNNTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|34482564|emb|CAE09564.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN [Wolinella succinogenes] Length = 283 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN +K E P L+TK +++ M +A +E A+ +GL Sbjct: 159 RDEVTHLLIFQNMINALKKERPDLFTKSLEEEVVEMFRKAVAVESAWGDYITQGQILGLT 218 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + +Y+Q++A+ R ++G+ P+ ++P W+ + ++K NFFE VT Y +G+ Sbjct: 219 SEIIHEYIQYLADDRLKRVGM-PILYNAKHPIKWVDQFSSFNEQKTNFFEGNVTNYAKGS 277 >gi|161760549|ref|NP_906664.2| ribonucleotide-diphosphate reductase subunit beta [Wolinella succinogenes DSM 1740] Length = 341 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN +K E P L+TK +++ M +A +E A+ +GL Sbjct: 217 RDEVTHLLIFQNMINALKKERPDLFTKSLEEEVVEMFRKAVAVESAWGDYITQGQILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + +Y+Q++A+ R ++G+ P+ ++P W+ + ++K NFFE VT Y +G+ Sbjct: 277 SEIIHEYIQYLADDRLKRVGM-PILYNAKHPIKWVDQFSSFNEQKTNFFEGNVTNYAKGS 335 >gi|224129040|ref|XP_002328875.1| predicted protein [Populus trichocarpa] gi|222839305|gb|EEE77642.1| predicted protein [Populus trichocarpa] Length = 329 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 200 RDEGLHCDFACLLYSLLR-------KKLSEEQVKGIVKDAVDIEREFVVDALPCALVGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EYQ+ + Sbjct: 253 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFFEKRVGEYQKAS 309 >gi|55742360|ref|NP_001007164.1| ribonucleoside-diphosphate reductase subunit M2 B [Danio rerio] gi|29561808|emb|CAD87804.1| novel protein similar to vertebrate ribonucleotide reductase M2 B (TP53 inducible) (RRM2B) [Danio rerio] Length = 349 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH NF +I ++ P + + ++ +A +E + E +P +G+N Sbjct: 224 RDEGLHCNFAC-LIYSYLVKKPSV------DRVNDIIAKAVSIEQEFLTEALPVNLIGMN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R +GL P +ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 277 CSLMKQYIEFVADRLLTDLGL-PKAYCSENPFDFM-ESISLEGKTNFFEKRVAEYQR 331 >gi|28393533|gb|AAO42187.1| putative ribonucleoside-diphosphate reductase small chain [Arabidopsis thaliana] Length = 243 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ TK + + + ++ +A +E + + + VG+N Sbjct: 111 RDEGLHCDFACLIYSLLR-------TKFDEDRLKAIVCDAVEIEREFVCDALSCALVGMN 163 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R +G ++ T NPF WM E+I L+ + NFFE RV EYQ+ + Sbjct: 164 RELMSQYIEFVADRLLAALGCGKVYGVT-NPFDWM-ELISLQGKTNFFEKRVGEYQKAS 220 >gi|145352915|ref|XP_001420779.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144581014|gb|ABO99072.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 346 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + + ENP L K Q ++ +A +E + + + VG+N Sbjct: 220 RDEGLHCDFACLLYSML--ENP-LSEKVLHQ----LVGDAVTIEKEFVCDALSCSLVGMN 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A Y++F+A+R Q+G+ L+ NPF WM E+I L+ + NFFE RV +YQ+ Sbjct: 273 ANMMSTYIEFVADRLLLQLGVSKLYNAV-NPFDWM-ELISLQGKANFFEHRVDQYQKAGV 330 Query: 122 LK 123 ++ Sbjct: 331 MQ 332 >gi|291220709|ref|XP_002730368.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like [Saccoglossus kowalevskii] Length = 402 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL K QQ+ ++ +A +E + + +P +G+N Sbjct: 277 RDEGLHCDFACLMFS-------HLTNKPSQQRIIEIIRDAVKIEQEFLTDALPVSLIGMN 329 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R +G ++ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 330 KDLMKQYIEFVADRLLLDLGCNKIYN-KENPFDFM-ENISLEGKTNFFEKRVGEYQK 384 >gi|126662515|ref|ZP_01733514.1| ribonucleoside-diphosphate reductase 1, beta subunit [Flavobacteria bacterium BAL38] gi|126625894|gb|EAZ96583.1| ribonucleoside-diphosphate reductase 1, beta subunit [Flavobacteria bacterium BAL38] Length = 325 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 70/124 (56%), Gaps = 8/124 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + + H+ K +++ ++ +A +E + E++P +G+N Sbjct: 198 RDEGMHCDFAV------HLHSHHIVNKVPKERITEIIVDALNIERQFITESLPVSLIGMN 251 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+ +R ++G + ++ + NPF +M ++I L+ + NFFE RV EYQ+ Sbjct: 252 ATLMTQYLEFVTDRLLVELGCDRVYN-SSNPFDFM-DMISLQGKTNFFEKRVAEYQKAGV 309 Query: 122 LKWD 125 + D Sbjct: 310 MNSD 313 >gi|85710107|ref|ZP_01041172.1| ribonucleotide reductase beta subunit [Erythrobacter sp. NAP1] gi|85688817|gb|EAQ28821.1| ribonucleotide reductase beta subunit [Erythrobacter sp. NAP1] Length = 346 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 2/121 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDE+LH GI + E TK ++ + + LE A+ G V G Sbjct: 189 VRDETLHCE-GIIKMFHTFCEERDCLTKAVKEDIIDICQKTVRLEDAFIDLAFEMGPVEG 247 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + A ++Y+++IA+ R Q+ L+P++ E+P PW+S +++ + NFFE R TEY +G Sbjct: 248 MTAKDIKKYIRYIADWRLGQLNLQPIYMIDEHPLPWLSPLLNGVEHANFFEARATEYSKG 307 Query: 120 A 120 A Sbjct: 308 A 308 >gi|9633651|ref|NP_051729.1| ribonucleotide reductase, small subunit [Myxoma virus] gi|6523870|gb|AAF14903.1|AF170726_19 ribonucleotide reductase, small subunit [Myxoma virus] gi|301134541|gb|ADK63655.1| M015L [Myxoma virus] Length = 322 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +K P +++ +++ EA ++E + E +P +G+N Sbjct: 198 RDEGLHCDFACLMFKHLK-HTPS------EERVASIIKEAVVIEQRFLTEALPVRLIGMN 250 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+R ++G +F T NPF +M E I L+ + NFFE RV++YQ+ Sbjct: 251 CELMCQYIEFVADRLIAELGYSKIFSAT-NPFDFM-ENISLEGKTNFFEKRVSDYQR 305 >gi|170664480|gb|ACB28637.1| small subunit ribonucleotide reductase [Myxoma virus] gi|170664652|gb|ACB28808.1| small subunit ribonucleotide reductase [recombinant virus 6918VP60-T2] Length = 322 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +K P +++ +++ EA ++E + E +P +G+N Sbjct: 198 RDEGLHCDFACLMFKHLK-HTPS------EERVASIIKEAVVIEQRFLTEALPVRLIGMN 250 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+R ++G +F T NPF +M E I L+ + NFFE RV++YQ+ Sbjct: 251 CELMCQYIEFVADRLIAELGYSKIFSAT-NPFDFM-ENISLEGKTNFFEKRVSDYQR 305 >gi|255079598|ref|XP_002503379.1| predicted protein [Micromonas sp. RCC299] gi|226518645|gb|ACO64637.1| predicted protein [Micromonas sp. RCC299] Length = 335 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + I K + R ++ EA +E + + +P VG+N Sbjct: 208 RDEGLHRDFACLLYSYIN-------KKPNESVVRQIVKEAVEIEKEFVCDALPCALVGMN 260 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A +Y++F+A+ Q+G+ + NPF WM E+I L+ + NFFE RV EYQ+ Sbjct: 261 ADLMSEYIEFVADHLLGQLGMSKEYN-AANPFDWM-ELISLQGKTNFFEKRVGEYQKSG 317 >gi|315635423|ref|ZP_07890689.1| ribonucleotide-diphosphate reductase beta subunit [Arcobacter butzleri JV22] gi|315480181|gb|EFU70848.1| ribonucleotide-diphosphate reductase beta subunit [Arcobacter butzleri JV22] Length = 339 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+T+E ++ R M +A LE ++ +G Sbjct: 215 RDEVTHLLLFQNMINSVRKERPDLFTQELEETVRAMFRKAVDLEASWGAYITQGQILGFT 274 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 QY++++A+RR +G + + ++P PW+ ++ NFFE V Y +G+ Sbjct: 275 DGIIRQYIEYLADRRLEAVGYKAEYG-VKHPIPWVDGYASFNDQRTNFFEGNVVNYSKGS 333 >gi|49899161|gb|AAH75746.1| Ribonucleotide reductase M2 polypeptide [Danio rerio] Length = 386 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 66/117 (56%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL +K ++ + ++ A +E + + +P +G+N Sbjct: 261 RDEGLHCDFACLMFK-------HLISKPSEETVKKIIMNAVEIEQEFLTDALPVKLIGMN 313 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G + +++ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 314 CDLMKQYIEFVADRLLLELGFDKVYR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 368 >gi|298713498|emb|CBJ27053.1| Ribonucleoside-diphosphate reductase small chain [Ectocarpus siliculosus] Length = 504 Score = 67.8 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 9/118 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++ K ++ ++ EA +E ++ +P +G+N Sbjct: 374 RDEGLHCDFACQLFASLE-------NKPSRETVMAIVREAVEVEKSFICGALPCSLIGMN 426 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 A QY++F+A+R +G + T+NPF WM ++I L+ + NFFE RV EYQ+ Sbjct: 427 AGVMSQYIEFVADRLLGSLGYGKSYG-TQNPFDWM-DLISLQGKTNFFEKRVGEYQKA 482 >gi|218197485|gb|EEC79912.1| hypothetical protein OsI_21460 [Oryza sativa Indica Group] Length = 345 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 65/119 (54%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K + + + ++ +A +E + + +P VG+N Sbjct: 215 RDEGLHCDFACLLYDLLR-------GKLDESRVQEIVADAVDIEREFVCDALPVALVGMN 267 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R +G + ++ NPF WM E+I L+ + NFFE RV +YQ+ + Sbjct: 268 GELMSQYIEFVADRLLMALGCKKMYN-VANPFDWM-ELISLQGKTNFFEKRVGDYQKAS 324 >gi|10344|emb|CAA26307.1| unnamed protein product [Spisula solidissima] Length = 300 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL K Q++ ++ EA +E + E +P +G+N Sbjct: 172 RDEGLHCDFACLMFS-------HLVNKPSQERIHQIIDEAVKIEQVFLTEALPCRLIGMN 224 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+R ++ + L+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 225 CDLMRQYIEFVADRLLLELKCDKLYN-KENPFDFM-EHISLEGKTNFFEKRVGEYQK 279 >gi|115466138|ref|NP_001056668.1| Os06g0127900 [Oryza sativa Japonica Group] gi|55296211|dbj|BAD67929.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group] gi|113594708|dbj|BAF18582.1| Os06g0127900 [Oryza sativa Japonica Group] gi|186920368|gb|ACC95437.1| ribonucleotide diphosphate reductase small subunit 2 [Oryza sativa Japonica Group] gi|215706414|dbj|BAG93270.1| unnamed protein product [Oryza sativa Japonica Group] gi|222634884|gb|EEE65016.1| hypothetical protein OsJ_19968 [Oryza sativa Japonica Group] Length = 345 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 65/119 (54%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K + + + ++ +A +E + + +P VG+N Sbjct: 215 RDEGLHCDFACLLYDLLR-------GKLDESRVQEIVADAVDIEREFVCDALPVALVGMN 267 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R +G + ++ NPF WM E+I L+ + NFFE RV +YQ+ + Sbjct: 268 GELMSQYIEFVADRLLMALGCKKMYN-VANPFDWM-ELISLQGKTNFFEKRVGDYQKAS 324 >gi|266918|sp|P07201|RIR2_SPISO RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit; AltName: Full=p41 gi|10342|emb|CAA38919.1| M2 (small) subunit of ribonucleotide reductase [Spisula solidissima] Length = 384 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL K Q++ ++ EA +E + E +P +G+N Sbjct: 256 RDEGLHCDFACLMFS-------HLVNKPSQERIHQIIDEAVKIEQVFLTEALPCRLIGMN 308 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+R ++ + L+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 309 CDLMRQYIEFVADRLLLELKCDKLYN-KENPFDFM-EHISLEGKTNFFEKRVGEYQK 363 >gi|221120499|ref|XP_002159812.1| PREDICTED: similar to hCG23833 [Hydra magnipapillata] Length = 387 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K +++ + ++ +A +EI + E++P +G+N Sbjct: 255 RDEGLHCDFAC-------LMYKHIVNKPSEERVKQIIRDAVAIEIEFLTESLPCDLLGMN 307 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + Y++F A+R + +G + ENPF +M E I L ++ NFFE+RV++YQ+ Sbjct: 308 KSLMKTYIEFCADRLINALGYSKEWN-VENPFDFM-ENISLARKANFFESRVSDYQKAG 364 >gi|188996383|ref|YP_001930634.1| Ribonucleoside-diphosphate reductase [Sulfurihydrogenibium sp. YO3AOP1] gi|188931450|gb|ACD66080.1| Ribonucleoside-diphosphate reductase [Sulfurihydrogenibium sp. YO3AOP1] Length = 326 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 64/116 (55%), Gaps = 3/116 (2%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60 DESLHL GI+ I + ENP + +F + R + +A LE+ Y + G+ Sbjct: 209 DESLHLQNGIEAILTMVEENPEIVDDYQFVENIRQSIIDAVELELNYLKTKFGGTTIFGV 268 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 + E+YM++IA+RR ++G +P F +NP ++ + D+KK NFFE TEY Sbjct: 269 SYGELERYMKYIADRRLIELGFDPQFGIDQNPLKFLQKE-DVKKLTNFFEVSSTEY 323 >gi|157736292|ref|YP_001488975.1| ribonucleotide-diphosphate reductase subunit beta [Arcobacter butzleri RM4018] gi|157698146|gb|ABV66306.1| ribonucleoside-diphosphate reductase, beta chain [Arcobacter butzleri RM4018] Length = 339 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+T E ++ R M +A LE ++ +G Sbjct: 215 RDEVTHLLLFQNMINSVRKERPDLFTSELEETVRAMFRKAVDLEASWGAYITQGQILGFT 274 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 QY++++A+RR +G + + ++P PW+ ++ NFFE V Y +G+ Sbjct: 275 DGIIRQYIEYLADRRLEAVGYKAEYG-VKHPIPWVDGYASFNDQRTNFFEGNVVNYSKGS 333 >gi|256421019|ref|YP_003121672.1| ribonucleoside-diphosphate reductase [Chitinophaga pinensis DSM 2588] gi|256035927|gb|ACU59471.1| Ribonucleoside-diphosphate reductase [Chitinophaga pinensis DSM 2588] Length = 323 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 65/119 (54%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH F + ++ P +++ T++ +A +E + + +P +G+N Sbjct: 198 RDEGLHCEFACLLYGMLENRLP-------EEQVHTIIRDAVAIEKEFITDALPVALIGMN 250 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + +Y++F+A+R ++G +F T NPF +M E+I L+ + NFFE RV +YQ+ Sbjct: 251 SKLMSEYIEFVADRWLSELGYTKIFN-TANPFDFM-EMISLQGKTNFFEKRVGDYQKAG 307 >gi|315452596|ref|YP_004072866.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter felis ATCC 49179] gi|315131648|emb|CBY82276.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter felis ATCC 49179] Length = 347 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL +I+ +K E P L++K+ ++ M EA LE + + LN Sbjct: 223 RDEVTHLALFQSMIHTLKKERPDLFSKDLVEEILEMFKEAVDLESTWGRVITQGEILDLN 282 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + Y++++A+ R H IGL P +T++P W+ + ++ NFFE RV+ Y +G+ Sbjct: 283 PVTLRAYIEYLADTRLHAIGL-PKIYHTKHPMRWVDQFSSFNSQRSNFFEARVSNYSKGS 341 >gi|324519017|gb|ADY47264.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum] Length = 376 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 9/124 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL K +++ ++ EA +E Y E +P G +G+N Sbjct: 251 RDEGLHRDFACLMFS-------HLKKKPNKERIYEIIREAVKIEQEYLTEALPVGLIGMN 303 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++++A+ ++ L+ ENPF +M+ I ++ + NFFE RV+EYQ+ Sbjct: 304 CELMSQYIEYVADHLLTELKCPKLYN-MENPFDFMAR-ISIEAKTNFFEKRVSEYQKAGV 361 Query: 122 LKWD 125 L D Sbjct: 362 LSTD 365 >gi|290977320|ref|XP_002671386.1| predicted protein [Naegleria gruberi] gi|284084954|gb|EFC38642.1| predicted protein [Naegleria gruberi] Length = 338 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 67/118 (56%), Gaps = 8/118 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +K +TK QQ +++ EA +E + E++P +G+N Sbjct: 212 RDEGLHTDFACLLYSTLK------FTKLPQQVVHSLVSEAVEIEKEFICESLPVDLIGMN 265 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + +QY++ +A+R +G + ++ + NPF WM+ +I + + NFFE +V EY + Sbjct: 266 SRLMQQYIEMVADRLLVSLGYDKIYN-SPNPFDWMN-IISVSGKTNFFEKKVGEYAKA 321 >gi|145349720|ref|XP_001419276.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579507|gb|ABO97569.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 329 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + + K ++ R ++ EA +E + +++P VG+N Sbjct: 201 RDEGLHRDFACLLFSMLN-------NKPSEETIRKIVTEAVEIEKEFVCDSLPCALVGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A Y++++A+ +GL + T NPF WM E+I L+ + NFFE RV EYQ+ Sbjct: 254 AGMMSDYIEYVADHLFCSLGLAKEYN-TTNPFDWM-ELISLQGKTNFFEKRVGEYQKAG 310 >gi|79160106|gb|AAI08038.1| Rrm2b protein [Danio rerio] Length = 349 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH NF + +L K + ++ +A +E + E +P +G+N Sbjct: 224 RDEGLHCNFAC-------LMYSYLVKKPSVDRVNDIIAKAVSIEQEFLTEALPVNLIGMN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R +GL P +ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 277 CSLMKQYIEFVADRLLTDLGL-PKAYCSENPFDFM-ESISLEGKTNFFEKRVAEYQR 331 >gi|289620013|emb|CBI53457.1| unnamed protein product [Sordaria macrospora] Length = 410 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +Q + ++ +A +E + E +P +G+N Sbjct: 272 RDEGLHTDFACLLFS-------HLNNRPSKQLIQDIIVDAVRIEQEFLTEALPCALLGMN 324 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A +QY++F+A+R +G E +++ T NPF +M E I L + NFFE RV +YQ+ Sbjct: 325 ADLMKQYIEFVADRLLVALGNEKVYRST-NPFDFM-ENISLGGKTNFFEKRVADYQKAG 381 >gi|91081999|ref|XP_969259.1| PREDICTED: similar to AGAP006818-PA [Tribolium castaneum] gi|270007377|gb|EFA03825.1| hypothetical protein TcasGA2_TC013940 [Tribolium castaneum] Length = 374 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 68/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL K +++ ++++ +A +E + E +P +G+N Sbjct: 250 RDEGLHCDFACLMFS-------HLVQKPSKERIQSIIQDAVKIEKEFLTEALPVSMIGMN 302 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R ++G E ++ ++NPF +M+ +I + + NFFE +V EYQ+ Sbjct: 303 CALMCQYIEFVADRLLGELGCEKIYN-SQNPFDFMT-IISNEGKTNFFEKKVGEYQKSG 359 >gi|187778605|ref|ZP_02995078.1| hypothetical protein CLOSPO_02200 [Clostridium sporogenes ATCC 15579] gi|187772230|gb|EDU36032.1| hypothetical protein CLOSPO_02200 [Clostridium sporogenes ATCC 15579] Length = 342 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 39/126 (30%), Positives = 70/126 (55%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I ++K ENP+++T+E +++ R M+ EI + +GLN Sbjct: 214 RDEVTHLVLFQNIIKELKSENPNIFTEELEEEFREMMRMGVEHEIKWGQYVTNNEILGLN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 ++Y+++++N R IGL+PL+ + ++P W+ L K +FFE +VT Y + Sbjct: 274 DELIDKYIKYLSNLRLTAIGLKPLYPEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AVFDFD 339 >gi|325261084|ref|ZP_08127822.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp. D5] gi|324032538|gb|EGB93815.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp. D5] Length = 347 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++ ++K E P L+T E +K R+M+ E EI + H + GLN Sbjct: 219 RDENTHLWLFRSILMELKKEEPWLFTAEKTEKYRSMIREGCEQEIRWGHYVIGDDIQGLN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y+Q++ N RC + LEP+++ E W+S+ + K +FFE R T Y Sbjct: 279 REMITDYIQYLGNLRCRGLELEPVYEGHEKEPESMSWVSQFSNANMIKTDFFEARSTAYA 338 Query: 118 QGAEL 122 + + L Sbjct: 339 KSSAL 343 >gi|237752265|ref|ZP_04582745.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter winghamensis ATCC BAA-430] gi|229376507|gb|EEO26598.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter winghamensis ATCC BAA-430] Length = 343 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E PHL+TK+ ++ M EA +E + +GL Sbjct: 219 RDEVTHLLLFQNMINSLRKEMPHLFTKDLIEEVLEMFREAVRVESTWGEYITQGQILGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + +Y++++A+ R ++GL L+ +P W+ ++K NFFE VT Y +G+ Sbjct: 279 SEIIHEYIRYLADNRLTRVGLPALYN-ARHPIKWVDSFSSFNEQKTNFFEGNVTNYAKGS 337 >gi|260061082|ref|YP_003194162.1| putative ribonucleoside-diphosphate reductase small chain [Robiginitalea biformata HTCC2501] gi|88785214|gb|EAR16383.1| probable ribonucleoside-diphosphate reductase small chain [Robiginitalea biformata HTCC2501] Length = 328 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 67/119 (56%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H ++ + + N HL K +++ ++ A +E + E++P +G+N Sbjct: 199 RDEGMHCDYAV------HLHNNHLVNKVPKERITQIITNALDIEREFITESLPVSLIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+ +R ++ E ++ T NPF +M ++I L+ + NFFE RV+EYQ+ Sbjct: 253 AKLMTQYLEFVTDRLLVELECEKVYNST-NPFDFM-DMISLQGKTNFFEKRVSEYQKAG 309 >gi|15606660|ref|NP_214040.1| ribonucleotide reductase beta chain [Aquifex aeolicus VF5] gi|18202109|sp|O67475|RIR2_AQUAE RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit; Contains: RecName: Full=Aae nrdB intein; AltName: Full=Aae RIR2 intein gi|2983879|gb|AAC07431.1| ribonucleotide reductase beta chain [Aquifex aeolicus VF5] Length = 696 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 2/120 (1%) Query: 7 HLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCE 66 H+ ++IN ++ ENP L+T E ++ A EI + +G+N E Sbjct: 577 HVTLFRNIINTLRKENPELFTPEIEKWIVEYFKYAVNEEIKWGQYVTQNQILGINDVLIE 636 Query: 67 QYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGAELKW 124 +Y++++ N R QIG +P++ + TENP W+ E + K +FF+ + Y + ELKW Sbjct: 637 RYIKYLGNLRITQIGFDPIYPEVTENPLKWIDEFRKINNTKTDFFQAKPQTYSKANELKW 696 >gi|195119943|ref|XP_002004488.1| GI19586 [Drosophila mojavensis] gi|193909556|gb|EDW08423.1| GI19586 [Drosophila mojavensis] Length = 393 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +++ ++ +A +E + + +P +G+N Sbjct: 268 RDEGLHCDFAVMMFR-------HLVQRPSRERIIEIISDAVTIEQEFLTDALPVNLIGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+R ++G+ ++ T+NPF +M E+I L + NFFE +V EYQ+ Sbjct: 321 CALMSQYIEFVADRLLVELGVGKIYN-TKNPFTFM-EMISLDGKTNFFEKKVGEYQR 375 >gi|158286793|ref|XP_308927.4| AGAP006818-PA [Anopheles gambiae str. PEST] gi|157020637|gb|EAA04227.4| AGAP006818-PA [Anopheles gambiae str. PEST] Length = 400 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 67/117 (57%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ ++ +A L+E + + +P +G+N Sbjct: 275 RDEGLHCDFACLMFK-------YLVQKPSKERVTEIIRDAVLIEQEFLTKALPVDMLGMN 327 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+R ++G E ++ +T+NPF +M E I L+ + NFFE +V EYQ+ Sbjct: 328 CDLMSQYIEFVADRLLLELGCEKIY-HTKNPFSFM-EFISLEGKTNFFEKKVGEYQK 382 >gi|323143005|ref|ZP_08077711.1| ribonucleoside-diphosphate reductase, beta subunit [Succinatimonas hippei YIT 12066] gi|322417199|gb|EFY07827.1| ribonucleoside-diphosphate reductase, beta subunit [Succinatimonas hippei YIT 12066] Length = 331 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 10/125 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLH-----EATLLEIAYAHETMPK 55 + DE+LH I + + +NP LW + + ++ E + +++A+ M K Sbjct: 199 INDETLHTESMIKLFREYIEQNPQLWNDDLKSTIYSIAEKMVELEDSFIDLAFGVNQMQK 258 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 L ++Y++FIA+RR +G++ +F +NP PW+ ++ + NFFE RV + Sbjct: 259 ----LAKEDVKKYIRFIADRRLSAMGMKAIFNEKKNPLPWVDAMLGV-THTNFFENRVVD 313 Query: 116 YQQGA 120 Y +GA Sbjct: 314 YAKGA 318 >gi|145537171|ref|XP_001454302.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124422057|emb|CAK86905.1| unnamed protein product [Paramecium tetraurelia] Length = 507 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K Q+ ++ A +E + E +P +G+N Sbjct: 382 RDEGLHTDFAC-------LLYKHMINKLSIQRVHEIISSAVEIEKEFISEALPVELIGMN 434 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + +QY++F+A+R +G ++ ++NPF WM ++I L+ + NFFE RV +YQ+ Sbjct: 435 SNLMKQYIEFVADRLIFALGAPKIYN-SKNPFEWM-DMISLQGKTNFFERRVGDYQKAG 491 >gi|67585619|ref|XP_665115.1| ribonucleotide reductase R2 subunit [Cryptosporidium hominis TU502] gi|54655552|gb|EAL34885.1| ribonucleotide reductase R2 subunit [Cryptosporidium hominis] Length = 296 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +K + P + + ++ EA +E + +++P +G+N Sbjct: 171 RDEGLHADFACLIYKALKFKLP-------APRVQQIISEAVEVERNFLCDSLPVDLIGMN 223 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R + + ++ + NPF WM ++I L+ + NFFE RV EYQ Sbjct: 224 SRLMAQYIEFVADRLLFALDIPKIYNVS-NPFDWM-DLISLQGKTNFFEKRVGEYQMAG 280 >gi|312130971|ref|YP_003998311.1| ribonucleoside-diphosphate reductase [Leadbetterella byssophila DSM 17132] gi|311907517|gb|ADQ17958.1| Ribonucleoside-diphosphate reductase [Leadbetterella byssophila DSM 17132] Length = 328 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 67/119 (56%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ T++ +A +E + + +P +G+N Sbjct: 202 RDEGLHRDFACLLYTK------YIVNKLPEEQVYTIIKDAVEIEKEFVSDALPVSLIGMN 255 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 AP QY++F+A+ + L+ ++ T NPF +M ++I L+ + NFFE RV EYQ+ Sbjct: 256 APQMCQYIEFVADHLLESLNLKKVYNAT-NPFDFM-DLISLQGKTNFFEKRVGEYQKAG 312 >gi|18859327|ref|NP_571525.1| ribonucleoside-diphosphate reductase subunit M2 [Danio rerio] gi|292624782|ref|XP_002665783.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like [Danio rerio] gi|3914657|sp|P79733|RIR2_DANRE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2; AltName: Full=Ribonucleotide reductase protein R2 class I; AltName: Full=Ribonucleotide reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|1695831|gb|AAB37103.1| ribonucleotide reductase protein R2 class I [Danio rerio] gi|27881838|gb|AAH44355.1| Ribonucleotide reductase M2 polypeptide [Danio rerio] gi|56207929|emb|CAI21240.1| ribonucleotide reductase M2 polypeptide [Danio rerio] gi|182889152|gb|AAI64707.1| Rrm2 protein [Danio rerio] Length = 386 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++ + ++ A +E + + +P +G+N Sbjct: 261 RDEGLHCDFACLMFK-------HLINKPSEETVKKIIMNAVEIEQEFLTDALPVKLIGMN 313 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G + +++ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 314 CDLMKQYIEFVADRLLLELGFDKVYR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 368 >gi|114568952|ref|YP_755632.1| ribonucleotide-diphosphate reductase subunit beta [Maricaulis maris MCS10] gi|114339414|gb|ABI64694.1| Ribonucleoside-diphosphate reductase [Maricaulis maris MCS10] Length = 345 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 2/121 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDESLH I + + E L T+E + LE + G V G Sbjct: 197 IRDESLHCEGMIKLFHAFAEETGAL-TQEVKDDITECCRTVVGLEDKFIDLAFEAGDVEG 255 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + + Y+++IA+ R Q+GL ++ E+P PW+SE+++ + NFFE R TEY +G Sbjct: 256 MTPDDIKTYIRYIADWRLGQLGLPKIYGVKEHPLPWLSEILNGVEHANFFEARATEYSKG 315 Query: 120 A 120 A Sbjct: 316 A 316 >gi|66475262|ref|XP_627447.1| ribonucleotide reductase small subunit, duplicated adjacent gene [Cryptosporidium parvum Iowa II] gi|9652154|gb|AAF91416.1|AF275635_1 ribonucleotide reductase R2 subunit [Cryptosporidium parvum] gi|46228920|gb|EAK89769.1| ribonucleotide reductase small subunit, duplicated adjacent gene [Cryptosporidium parvum Iowa II] Length = 352 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +K + P + + ++ EA +E + +++P +G+N Sbjct: 227 RDEGLHADFACLIYKALKFKLP-------APRVQQIISEAVEVERNFLCDSLPVDLIGMN 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R + + ++ + NPF WM ++I L+ + NFFE RV EYQ Sbjct: 280 SRLMAQYIEFVADRLLFALDIPKIYNVS-NPFDWM-DLISLQGKTNFFEKRVGEYQMAG 336 >gi|215401441|ref|YP_002332744.1| RR2b [Spodoptera litura nucleopolyhedrovirus II] gi|209483982|gb|ACI47415.1| RR2b [Spodoptera litura nucleopolyhedrovirus II] Length = 313 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 14/120 (11%) Query: 2 RDESLHLNFGIDVIN---QIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58 RDE LH NF N K++ P + M EA +E+ + E +P+ V Sbjct: 191 RDEGLHTNFACLYYNTRVDQKLDVPTV---------SDMFAEAVAIEMEFFAEALPESLV 241 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 G+NA +Y++F+A+R Q+ P +TENPF +M+ I L+ + NFFE RV EY++ Sbjct: 242 GMNAEMMRKYIEFVADRLLVQLKY-PKIYHTENPFEFMNN-ISLEGKTNFFEKRVGEYKR 299 >gi|298207002|ref|YP_003715181.1| probable ribonucleoside-diphosphate reductase small chain [Croceibacter atlanticus HTCC2559] gi|83849636|gb|EAP87504.1| probable ribonucleoside-diphosphate reductase small chain [Croceibacter atlanticus HTCC2559] Length = 325 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 69/124 (55%), Gaps = 8/124 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + N HL K +++ R ++ +A +E + E++P +G+N Sbjct: 198 RDEGMHCDFAV------HLHNKHLVNKVSKERIREIIVDALNIEREFITESLPASLIGMN 251 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+ +R ++ E + T NPF +M ++I L+ + NFFE RV +YQ+ Sbjct: 252 SNLMTQYLEFVTDRLLLELECEKEYN-TANPFDFM-DMISLQGKTNFFEKRVGDYQKAGV 309 Query: 122 LKWD 125 + D Sbjct: 310 MDQD 313 >gi|223039245|ref|ZP_03609535.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter rectus RM3267] gi|222879606|gb|EEF14697.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter rectus RM3267] Length = 340 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+T E + K M A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRTERPDLFTSEMEAKIYDMFKRAGELEIKWGKYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 EQY++++ ++R IGL+ + +P W+ + +K NFFE +VT Y +G+ Sbjct: 276 DDIIEQYIRYLIDQRLVAIGLKRRYD-ARHPIKWVDDFAKFNDQKSNFFEAKVTNYSKGS 334 >gi|148230557|ref|NP_001080772.1| ribonucleotide reductase M2 polypeptide [Xenopus laevis] gi|28839018|gb|AAH47975.1| Rrm2-prov protein [Xenopus laevis] Length = 386 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ ++ A +E + E +P +G+N Sbjct: 261 RDEGLHCDFACLMFR-------HLVHKPSEERVVQLITNAVQIEQEFLTEALPVNLIGMN 313 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G +FK + NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 314 CTLMKQYIEFVADRLLLELGFNKVFKAS-NPFDFM-ENISLEGKTNFFEKRVGEYQK 368 >gi|255530602|ref|YP_003090974.1| Ribonucleoside-diphosphate reductase [Pedobacter heparinus DSM 2366] gi|255343586|gb|ACU02912.1| Ribonucleoside-diphosphate reductase [Pedobacter heparinus DSM 2366] Length = 324 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F + +K K Q++ ++ +A +E + + +P +G+N Sbjct: 197 RDEGSHCEFACLLYGMLK-------NKLSQEQVHGIIRDAVEIEKEFVTDALPVALIGMN 249 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R ++G ++ T NPF +M E+I L+ + NFFE RV +YQ+ Sbjct: 250 AKLMSQYIEFVADRWLQELGYSKIYNAT-NPFDFM-EMISLQGKTNFFEKRVGDYQKSGV 307 Query: 122 L 122 L Sbjct: 308 L 308 >gi|224100309|ref|XP_002311826.1| predicted protein [Populus trichocarpa] gi|222851646|gb|EEE89193.1| predicted protein [Populus trichocarpa] Length = 342 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ H W QK ++ EA +E + E +P +G+N Sbjct: 213 RDEGLHCDFACLLYSLLQ-RQLH-W-----QKVYHIVGEAVEIETKFVCEALPCALIGMN 265 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A Y++F+A+R +G + + ENPF WM E I L+ + NFFE RV +YQ+ + Sbjct: 266 ATLMGDYIKFVADRLLVALGYQKKYN-VENPFDWM-EFISLQGKANFFERRVGDYQKAS 322 >gi|38229183|ref|NP_938276.1| 20L [Yaba monkey tumor virus] gi|38000454|gb|AAR07377.1| 20L [Yaba monkey tumor virus] Length = 325 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + NP L + R ++ EA +E + E MP +G+N Sbjct: 200 RDEGLHCDFACMMFKHLS--NPPL-----ENVIRDIVIEAVDIEKNFLTEAMPVKLIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G + + ++NPF +M E I L+ + NFFE RV+EYQ+ Sbjct: 253 CDLMKQYIEFVADRLLLELGCKKYY-CSKNPFDFM-ENISLEGKTNFFEKRVSEYQK 307 >gi|12085003|ref|NP_073405.1| 20L protein [Yaba-like disease virus] gi|56404692|sp|Q9DHU2|RIR2_YLDV RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|12056179|emb|CAC21258.1| 20L protein [Yaba-like disease virus] Length = 325 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F I HL R ++ EA +E + E +P +G+N Sbjct: 200 RDEGLHCDFAC-------IMFKHLLNPPLNSVVRDIIIEAVNIEKNFLTEAIPVKLIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G + + ++NPF +M E I L+ + NFFE RV+EYQ+ Sbjct: 253 CDLMKQYIEFVADRLLLELGCDKYY-CSKNPFDFM-ENISLEGKTNFFEKRVSEYQK 307 >gi|171687074|ref|XP_001908478.1| hypothetical protein [Podospora anserina S mat+] gi|170943498|emb|CAP69151.1| unnamed protein product [Podospora anserina S mat+] Length = 409 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +Q ++ +A +E + E +P +G+N Sbjct: 271 RDEGLHTDFACLLFS-------HLNNRPSKQLVEDIIRDAVTIEQEFLTEALPCALLGMN 323 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + +QY++F+A+R +G + +++ T NPF +M E I L + NFFE RV EYQ+ Sbjct: 324 SNLMKQYIEFVADRLLVALGNDKIYRST-NPFDFM-ENISLGGKTNFFEKRVGEYQKAG 380 >gi|319953269|ref|YP_004164536.1| ribonucleoside-diphosphate reductase [Cellulophaga algicola DSM 14237] gi|319421929|gb|ADV49038.1| Ribonucleoside-diphosphate reductase [Cellulophaga algicola DSM 14237] Length = 326 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 70/124 (56%), Gaps = 8/124 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + N H+ + +++ +L +A +E + E++P +G+N Sbjct: 198 RDEGMHCDFAV------HLHNKHIINQVPKERITEILVDALNIEREFITESLPASLIGMN 251 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+ +R ++ + ++ T NPF +M ++I ++ + NFFE RV+EYQ+ Sbjct: 252 SKLMTQYLEFVTDRLLVELECDKVYNST-NPFDFM-DMIGMEGKTNFFEKRVSEYQKAGV 309 Query: 122 LKWD 125 L D Sbjct: 310 LNSD 313 >gi|332185556|ref|ZP_08387304.1| ribonucleotide reductase, small chain family protein [Sphingomonas sp. S17] gi|332014534|gb|EGI56591.1| ribonucleotide reductase, small chain family protein [Sphingomonas sp. S17] Length = 351 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 2/121 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDESLH I + + E L TK + LE + G V G Sbjct: 189 VRDESLHCEGIIQLFHAFTKERQCL-TKAVKDDIADQCQTTVRLEDNFIDLAFEMGPVNG 247 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + A ++Y+++IA+ R Q+GL+P++ E+P PW++ +++ + NFFETR TEY + Sbjct: 248 MTAKDIKKYIRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANFFETRATEYSKA 307 Query: 120 A 120 A Sbjct: 308 A 308 >gi|328771482|gb|EGF81522.1| hypothetical protein BATDEDRAFT_16297 [Batrachochytrium dendrobatidis JAM81] Length = 336 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + K + ++HEA +E ++ E++P +G+N Sbjct: 210 RDEGLHTDFACLLFTLLN-------NKPTDSVIQQIIHEAVTIEQEFSTESLPVALIGMN 262 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A +QY++F+A+R ++G+ P NPF +M ++I L+ + NFFE RV EYQ+ Sbjct: 263 ANLMKQYIEFVADRLFIELGM-PKKYGVGNPFDFM-DMISLQGKTNFFEKRVGEYQKSG 319 >gi|62637405|ref|YP_227403.1| Ribonucleotide reductase small subunit [Deerpox virus W-848-83] gi|115503265|gb|ABI99183.1| ribonucleotide reductase small subunit [Deerpox virus W-848-83] Length = 321 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + Q+ + P + ++ EA +E ++ + +P +G+N Sbjct: 196 RDEGLHCDFACLMFKQL-LYPPS------TSRIINIIVEAVSIEKSFLTKALPVKLIGMN 248 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+R ++G +FK +ENPF +M E I L+ + NFFE RV++YQ+ Sbjct: 249 CELMCQYIEFVADRLLSELGCNKIFK-SENPFDFM-ESISLEGKTNFFEKRVSDYQK 303 >gi|86132508|ref|ZP_01051102.1| ribonucleoside-diphosphate reductase small chain [Dokdonia donghaensis MED134] gi|85817069|gb|EAQ38253.1| ribonucleoside-diphosphate reductase small chain [Dokdonia donghaensis MED134] Length = 328 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 68/122 (55%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + N HL K +++ ++ A +E + E++P +G+N Sbjct: 198 RDEGVHCDFAV------HLHNHHLVNKVPKERITEIIVNALDIEREFITESLPVSLIGMN 251 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++++ +R ++ E ++ T NPF +M ++I L+ + NFFE RV EYQ+ Sbjct: 252 SNLMTQYLEYVTDRLLTELDCEKVYN-TANPFDFM-DMISLQGKTNFFEKRVGEYQKAGV 309 Query: 122 LK 123 +K Sbjct: 310 VK 311 >gi|85109237|ref|XP_962820.1| ribonucleoside-diphosphate reductase M2 subunit [Neurospora crassa OR74A] gi|30316285|sp|Q9C167|RIR2_NEUCR RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|16273691|gb|AAK14804.2| small subunit of ribonucleotide reductase [Neurospora crassa] gi|28924456|gb|EAA33584.1| ribonucleoside-diphosphate reductase M2 subunit [Neurospora crassa OR74A] Length = 410 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +Q + ++ +A +E + E +P +G+N Sbjct: 272 RDEGLHTDFACLLFS-------HLNNRPSKQLIQEIIVDAVRIEQEFLTEALPCALLGMN 324 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A +QY++F+A+R +G E +++ T NPF +M E I L + NFFE RV +YQ+ Sbjct: 325 ADLMKQYIEFVADRLLVALGNEKIYRST-NPFDFM-ENISLGGKTNFFEKRVGDYQKAG 381 >gi|294877483|ref|XP_002768004.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus ATCC 50983] gi|239870142|gb|EER00722.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus ATCC 50983] Length = 247 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 64/112 (57%), Gaps = 8/112 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +FG + N +K +T+ +++ ++ A +E + + +P G +G+N Sbjct: 120 RDEGLHTDFGCLLYNMLK------FTRLPEERVEDIVRSAVNVEREFITDALPVGLIGMN 173 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 113 A +Y++F+A+R +G ++ + NPF WM+ +I L+ + NFFE RV Sbjct: 174 AELMGRYIEFVADRLLVALGYAKIYN-SANPFDWMT-MISLQGKTNFFEKRV 223 >gi|72008642|ref|XP_780110.1| PREDICTED: similar to ribonucleotide reductase protein R2 class I isoform 1 [Strongylocentrotus purpuratus] gi|115928579|ref|XP_001179668.1| PREDICTED: similar to ribonucleotide reductase protein R2 class I [Strongylocentrotus purpuratus] Length = 412 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++ + ++ EA +E + + +P +G+N Sbjct: 282 RDEGLHCDFACLMFK-------HLNNKPDEEHVQGIIKEAVAIEQEFLTDALPCSLIGMN 334 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 A ++Y++F+A+R ++G ++K ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 335 AVLMKRYIEFVADRLLVELGCGKIWK-VENPFDFM-ENISLEGKTNFFEKRVGEYQK 389 >gi|225849393|ref|YP_002729557.1| ribonucleoside-diphosphate reductase subunit beta [Sulfurihydrogenibium azorense Az-Fu1] gi|225644764|gb|ACN99814.1| ribonucleoside-diphosphate reductase, beta subunit [Sulfurihydrogenibium azorense Az-Fu1] Length = 326 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 3/116 (2%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60 DESLHL GI+ I + ENP + F + R + +A LE+ Y + G+ Sbjct: 209 DESLHLQNGIEAILTMVEENPEIVDDYNFVENIRQSIIDAVELELNYLKTKFGGTTIFGV 268 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 + E+YM++IA+RR ++G +P F +NP ++ + D+KK NFFE TEY Sbjct: 269 SYNELERYMKYIADRRLVELGFDPQFGIDQNPLKFLQKE-DVKKLTNFFEVSSTEY 323 >gi|195401438|ref|XP_002059320.1| GJ18335 [Drosophila virilis] gi|194142326|gb|EDW58732.1| GJ18335 [Drosophila virilis] Length = 394 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +++ ++ +A +E + + +P +G+N Sbjct: 269 RDEGLHCDFAVLMFQ-------HLVQRPCRERIIEIISDAVTIEQEFLTDALPVNLIGMN 321 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +Y++F+A+R ++G+ L+ T+NPF +M E+I L + NFFE +V EYQ+ Sbjct: 322 CALMSEYIEFVADRLLVELGVGKLYN-TKNPFTFM-EMISLDGKTNFFEKKVGEYQR 376 >gi|210616053|ref|ZP_03290925.1| hypothetical protein CLONEX_03144 [Clostridium nexile DSM 1787] gi|210149961|gb|EEA80970.1| hypothetical protein CLONEX_03144 [Clostridium nexile DSM 1787] Length = 355 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +++ ++K E P L+T+++ + R+M+ E EI + H + GLN Sbjct: 227 RDENTHLWLFRNILIELKKEQPDLFTEQYIDEYRSMIKEGCEQEIKWGHYVIGDDVQGLN 286 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y+Q++ N RC +G P+++ E W+S+ + K +FFE R T Y Sbjct: 287 REMITDYVQYLGNLRCTNLGFAPIYEGHETEPESMRWVSQYSNANAIKTDFFEARSTAYA 346 Query: 118 QGAEL 122 + + L Sbjct: 347 KSSAL 351 >gi|325286576|ref|YP_004262366.1| Ribonucleoside-diphosphate reductase [Cellulophaga lytica DSM 7489] gi|324322030|gb|ADY29495.1| Ribonucleoside-diphosphate reductase [Cellulophaga lytica DSM 7489] Length = 328 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 67/119 (56%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H ++ + + N HL K +++ +L +A +E + E++P +G+N Sbjct: 199 RDEGMHCDYAV------HLHNHHLINKVPKERITEILVDALDIEREFITESLPVSLIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+ +R ++ + ++ T NPF +M ++I L+ + NFFE RV EYQ+ Sbjct: 253 SKLMTQYLEFVTDRLLVELNCDKVYNST-NPFDFM-DMISLQGKTNFFEKRVAEYQKSG 309 >gi|302783485|ref|XP_002973515.1| hypothetical protein SELMODRAFT_173451 [Selaginella moellendorffii] gi|302787555|ref|XP_002975547.1| hypothetical protein SELMODRAFT_175019 [Selaginella moellendorffii] gi|300156548|gb|EFJ23176.1| hypothetical protein SELMODRAFT_175019 [Selaginella moellendorffii] gi|300158553|gb|EFJ25175.1| hypothetical protein SELMODRAFT_173451 [Selaginella moellendorffii] Length = 347 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + + + K +++ + ++ +A +E + E + VG+N Sbjct: 217 RDEGLHCDFACLLYSLLNV-------KLDEKRVKEIVSDAVEIERQFVCEALSCDLVGMN 269 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY+ F+A+R +G LF NPF WM ++I L+ + NFFE RV EYQ+ + Sbjct: 270 ARLMSQYIDFVADRLMVVLGYNKLFNAI-NPFDWM-DLISLQGKTNFFEKRVGEYQKAS 326 >gi|188588149|ref|YP_001919720.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium botulinum E3 str. Alaska E43] gi|251778737|ref|ZP_04821657.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|188498430|gb|ACD51566.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum E3 str. Alaska E43] gi|243083052|gb|EES48942.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 344 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 66/123 (53%), Gaps = 2/123 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I +++ ENP +T + + + + M+ EI + H + G+N Sbjct: 218 RDENTHLWLFRNIIKELQSENPESFTTDLKNELKEMMRIGVENEILWGHYVIGDKIQGIN 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 E Y++++ N+R +IGL LF+ + ENP W+ V + K +FFE + T Y + Sbjct: 278 KKLIEDYIKYLGNKRLKEIGLGMLFEGFEENPATWVDVVANSNSVKTDFFEAKSTAYAKV 337 Query: 120 AEL 122 + L Sbjct: 338 STL 340 >gi|119360103|gb|ABL66780.1| At5g40942 [Arabidopsis thaliana] Length = 231 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 6/108 (5%) Query: 17 QIKIENPH----LWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFI 72 QI IEN H L TK + + + ++ +A +E + + + VG+N QY++F+ Sbjct: 103 QIAIENIHSEILLRTKFDEDRLKAIVCDAVEIEREFVCDALSCALVGMNRELMSQYIEFV 162 Query: 73 ANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A+R +G ++ T NPF WM E+I L+ + NFFE RV EYQ+ + Sbjct: 163 ADRLLAALGCGKVYGVT-NPFDWM-ELISLQGKTNFFEKRVGEYQKAS 208 >gi|195333568|ref|XP_002033462.1| GM20395 [Drosophila sechellia] gi|195582581|ref|XP_002081105.1| GD25870 [Drosophila simulans] gi|194125432|gb|EDW47475.1| GM20395 [Drosophila sechellia] gi|194193114|gb|EDX06690.1| GD25870 [Drosophila simulans] Length = 393 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +++ ++ +A +E + + +P +G+N Sbjct: 268 RDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+R ++G+ ++ T+NPF +M E+I L + NFFE +V EYQ+ Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVAEYQR 375 >gi|227501022|ref|ZP_03931071.1| ribonucleoside-diphosphate reductase [Anaerococcus tetradius ATCC 35098] gi|227216795|gb|EEI82193.1| ribonucleoside-diphosphate reductase [Anaerococcus tetradius ATCC 35098] Length = 352 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 4/123 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +IN +K E L+ E Q R ML E EIA+ + GLN Sbjct: 224 RDENTHLWLFRSLINDLKKEREDLFVPELQNYYRNMLKEGVEQEIAWGKYAIGNEIAGLN 283 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 E Y++++ N R +GLE L++ + E P W+ E D K +FFE +VT Y Sbjct: 284 EKMIEDYIKYLGNLRAKGLGLEALYEGFDEIPESMKWVDEYSDPNGVKTDFFEAKVTAYS 343 Query: 118 QGA 120 + + Sbjct: 344 KSS 346 >gi|237749822|ref|ZP_04580302.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter bilis ATCC 43879] gi|229374572|gb|EEO24963.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter bilis ATCC 43879] Length = 351 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL +I + E P L+T+ Q + M +A LE ++ +GL Sbjct: 226 RDEITHLTIFQQMIISTRKERPDLFTQALQDEVMEMFRQAVDLESSWGEYITQGQILGLT 285 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 A QY++++A++R + P+ T+NP W+ E ++ ++ NFFE +V Y +G Sbjct: 286 AKIIRQYIEYLADKRLKAVDY-PILYNTQNPIQWVDEQVNFNNQRTNFFEAKVRNYTRG- 343 Query: 121 ELKWD 125 ELK++ Sbjct: 344 ELKFE 348 >gi|294013210|ref|YP_003546670.1| ribonucleoside-diphosphate reductase beta chain [Sphingobium japonicum UT26S] gi|292676540|dbj|BAI98058.1| ribonucleoside-diphosphate reductase beta chain [Sphingobium japonicum UT26S] Length = 351 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 2/121 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDE+LH GI + ++ T + M + +E A+ G V G Sbjct: 189 VRDETLHCE-GIVRLFHAFVKERDCLTASVKDDIMDMCQKTVRIEDAFVDLVFEMGPVPG 247 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + ++Y+++IA+ R Q+GL+P++ E+P PW++ +++ + NFFETR TEY + Sbjct: 248 MTPKDIKKYVRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANFFETRATEYSKA 307 Query: 120 A 120 A Sbjct: 308 A 308 >gi|195172750|ref|XP_002027159.1| GL20023 [Drosophila persimilis] gi|198459455|ref|XP_001361381.2| GA21447 [Drosophila pseudoobscura pseudoobscura] gi|194112972|gb|EDW35015.1| GL20023 [Drosophila persimilis] gi|198136695|gb|EAL25959.2| GA21447 [Drosophila pseudoobscura pseudoobscura] Length = 391 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 67/117 (57%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + + HL + +++ ++ +A +E + E +P +G+N Sbjct: 266 RDEGLHCDFAVLMYH-------HLVQRPKRERIIEIIRDAVEIEQEFLTEALPVNLIGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+R ++G+ ++ T+NPF +M E+I L + NFFE +V EYQ+ Sbjct: 319 CVLMSQYIEFVADRLLGELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVAEYQR 373 >gi|17551968|ref|NP_497821.1| RiboNucleotide Reductase family member (rnr-2) [Caenorhabditis elegans] gi|1172941|sp|P42170|RIR2_CAEEL RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|3873950|emb|CAA84688.1| C. elegans protein C03C10.3, confirmed by transcript evidence [Caenorhabditis elegans] Length = 381 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 67/117 (57%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++++ K QQ+ ++ +A +E + E +P +G+N Sbjct: 256 RDEGLHRDFACLLYSKLQ-------KKLTQQRIYDIIKDAVAIEQEFLTEALPVDMIGMN 308 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+ ++G + L+K ++NPF +M E I + + NFFE RV+EYQ+ Sbjct: 309 CRLMSQYIEFVADHLLVELGCDKLYK-SKNPFDFM-ENISIDGKTNFFEKRVSEYQR 363 >gi|190896512|gb|ACE96769.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896530|gb|ACE96778.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFFEKRVGEY 223 >gi|190896528|gb|ACE96777.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFFEKRVGEY 223 >gi|211956300|ref|YP_002302368.1| ribonucleotide reductase small subunit [Deerpox virus W-1170-84] gi|115503095|gb|ABI99013.1| ribonucleotide reductase small subunit [Deerpox virus W-1170-84] Length = 321 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + Q+ + P+ + ++ EA +E ++ +P +G+N Sbjct: 196 RDEGLHCDFACLMFKQL-LHPPN------PSRIINIIVEAVSIEKSFLTTALPVKLIGMN 248 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+R ++G +FK +ENPF +M E I L+ + NFFE RV++YQ+ Sbjct: 249 CELMCQYIEFVADRLLSELGCTKIFK-SENPFDFM-ESISLEGKTNFFEKRVSDYQK 303 >gi|27923845|sp|Q9QTF2|RIR2_RSIV RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|5688956|dbj|BAA82755.1| ribonucleotide reductase small subunit [Red sea bream iridovirus] gi|327396894|dbj|BAK14260.1| ribonucleotide diphosphate reductase small subunit [Red sea bream iridovirus] Length = 312 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + Q+ K Q + ++ +A +E A+ E + +G+N Sbjct: 188 RDEGLHCDFACMLFRQMA-------NKPCQDDAHQIISDAVDIETAFFREALKTPLLGMN 240 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + S + Y+QF+A+R +G ++ + NPF +M I ++ + NFFE RV+EYQ+ Sbjct: 241 SDSMKLYIQFVADRLLDALGYAKMYNVS-NPFDFMDN-ISIEGKTNFFERRVSEYQR 295 >gi|190896544|gb|ACE96785.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFFEKRVGEY 223 >gi|239502693|ref|ZP_04662003.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter baumannii AB900] Length = 309 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 7/125 (5%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 +E HL+ +++ ++ EN ++T+ F K+ + ++ +EI++ + + KG N Sbjct: 189 EEGTHLDLFAHMLDTLRHENKDVFTQSFWNKALEVFLTSSEMEISWG-KYITKGVT--NP 245 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119 + E Y++ +AN R QI P Y +NPFPW+ + EKNFFETRVT+Y+ G Sbjct: 246 KAIEDYIKHLANLRAEQIQ-APFVPYPGVKNPFPWVEQFSKPNTSEKNFFETRVTDYKVG 304 Query: 120 AELKW 124 L W Sbjct: 305 GALVW 309 >gi|190896536|gb|ACE96781.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896560|gb|ACE96793.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896566|gb|ACE96796.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFFEKRVGEY 223 >gi|301097698|ref|XP_002897943.1| ribonucleoside-diphosphate reductase small chain [Phytophthora infestans T30-4] gi|262106388|gb|EEY64440.1| ribonucleoside-diphosphate reductase small chain [Phytophthora infestans T30-4] Length = 360 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 67/119 (56%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + +++ + P + + ++ +A +E + +++P +G+N Sbjct: 235 RDEGMHTDFACLMYSKLVNKLP-------ESRVHEIIRDAVAIEHEFVCDSLPVELIGMN 287 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R + +G+ ++ +NPF WM ++I L+ + NFFE RV EY + Sbjct: 288 SALMCQYIEFVADRLLYSLGVSKIYN-VKNPFDWM-DMISLQGKTNFFEKRVGEYSKAG 344 >gi|190896524|gb|ACE96775.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896534|gb|ACE96780.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFFEKRVGEY 223 >gi|4836362|gb|AAD30422.1|AF117061_1 ribonucleotide reductase R2 subunit [Aedes albopictus] Length = 398 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K Q++ ++ EA L+E + + +P +G+N Sbjct: 273 RDEGLHTDFACLMFK-------YLVQKPSQERVIEIIREAVLIEQEFLTKALPVDLLGMN 325 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F A+R ++G++ ++ T+NPF +M E I L+ + NFFE +V EYQ+ Sbjct: 326 CELMSQYIEFEADRLLLELGIDKIYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQK 380 >gi|292658982|gb|ADE34370.1| ribonucleotide reductase small chain [Turbot reddish body iridovirus] Length = 312 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + Q+ K Q+ + ++ +A +E A+ E + +G+N Sbjct: 188 RDEGLHCDFACMLFRQMA-------NKPSQEDAHQIISDAVDIETAFFREALKTPLLGMN 240 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + S Y+QF+A+R +G ++ NPF +M I ++ + NFFE RV+EYQ+ Sbjct: 241 SDSMRLYIQFVADRLLDALGYAKMYN-VANPFDFMDN-ISIEGKTNFFERRVSEYQR 295 >gi|328872436|gb|EGG20803.1| ribonucleotide reductase small subunit [Dictyostelium fasciculatum] Length = 335 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 67/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N++ N L K + +++ +A E + +++P +G+N Sbjct: 201 RDEGLHCDFACLLYNKL---NNKLDVKTIE----SIIRDAVECEKEFVTDSLPVDLIGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +Y++F A+R +G + ++ + NPF WM E+I L ++ NFFE +V+EY + Sbjct: 254 SREMSKYIEFCADRLLVSLGYKKIYN-SANPFDWM-EMISLMRKANFFEGKVSEYAKAGV 311 Query: 122 LK 123 K Sbjct: 312 AK 313 >gi|156058956|ref|XP_001595401.1| hypothetical protein SS1G_03490 [Sclerotinia sclerotiorum 1980] gi|154701277|gb|EDO01016.1| hypothetical protein SS1G_03490 [Sclerotinia sclerotiorum 1980 UF-70] Length = 407 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +Q + ++ EA +E + E +P +G+N Sbjct: 266 RDEGLHTDFACLLFS-------HLKHRPSKQAVQDVITEAVEIEQEFLTEALPCALLGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + +QY++F+A+R +G + ++K + NPF +M E I L + NFFE RV +YQ+ Sbjct: 319 STLMKQYIEFVADRLLVTLGNDKVYK-SANPFDFM-ENISLAGKTNFFEKRVGDYQKAG 375 >gi|307295356|ref|ZP_07575195.1| Ribonucleoside-diphosphate reductase [Sphingobium chlorophenolicum L-1] gi|306878859|gb|EFN10078.1| Ribonucleoside-diphosphate reductase [Sphingobium chlorophenolicum L-1] Length = 351 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 2/121 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDE+LH GI + ++ T + M + +E A+ G V G Sbjct: 189 VRDETLHCE-GIIRLFHAFVKERDCLTASVKDDIMDMCQKTVRIEDAFIDLVFEMGPVPG 247 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + ++Y+++IA+ R Q+GL+P++ E+P PW++ +++ + NFFETR TEY + Sbjct: 248 MTPKDIKKYVRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANFFETRATEYSKA 307 Query: 120 A 120 A Sbjct: 308 A 308 >gi|110636874|ref|YP_677081.1| ribonucleoside-diphosphate reductase 1 subunit beta [Cytophaga hutchinsonii ATCC 33406] gi|110279555|gb|ABG57741.1| ribonucleoside-diphosphate reductase 1, beta subunit [Cytophaga hutchinsonii ATCC 33406] Length = 324 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 67/119 (56%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K ++ ++ EA +E + +++P +G+N Sbjct: 198 RDEGLHCDFACLLYTK------YINNKLPAERVIQIILEAVEIEKEFVTDSLPVDLIGMN 251 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A +QY++F+A+R +G+ F T NPF +M E+I L+ + NFFE RV+EYQ+ Sbjct: 252 ARLMQQYIEFVADRLLVALGVPKQFNAT-NPFDFM-EMISLQGKTNFFEKRVSEYQKSG 308 >gi|297818266|ref|XP_002877016.1| hypothetical protein ARALYDRAFT_484491 [Arabidopsis lyrata subsp. lyrata] gi|297322854|gb|EFH53275.1| hypothetical protein ARALYDRAFT_484491 [Arabidopsis lyrata subsp. lyrata] Length = 329 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +K + +++ ++++ +A +E + + +P VG+N Sbjct: 198 RDEGLHCDFACLLYTLLKTKLS-------EERVKSIVCDAVEIEREFVCDALPCALVGMN 250 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R +G ++ T NPF WM E+I L+ + NFFE RV +YQ+ + Sbjct: 251 RDLMSQYIEFVADRLLGALGYGKVYGVT-NPFDWM-ELISLQGKTNFFEKRVGDYQKAS 307 >gi|331086748|ref|ZP_08335825.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae bacterium 9_1_43BFAA] gi|330409914|gb|EGG89349.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae bacterium 9_1_43BFAA] Length = 347 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 67/125 (53%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +++ +++ E P L+++E +++ R M+ E EIA+ H + GL+ Sbjct: 219 RDENTHLWLFTNILRELRKELPELFSEEKEKEYRQMIREGCEQEIAWGHYVIGDAVSGLS 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y++++ N RC +GL P+++ E W+S+ + K +FFE + T Y Sbjct: 279 CDMITDYVKYLGNLRCKNLGLAPIYEGHEKEPESMGWVSQFSNANMIKTDFFEAKSTAYA 338 Query: 118 QGAEL 122 + + L Sbjct: 339 KSSAL 343 >gi|87198296|ref|YP_495553.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium aromaticivorans DSM 12444] gi|87133977|gb|ABD24719.1| Ribonucleoside-diphosphate reductase [Novosphingobium aromaticivorans DSM 12444] Length = 351 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 66/121 (54%), Gaps = 2/121 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDESLH GI + ++ TK ++ + LE A+ +G V G Sbjct: 189 VRDESLHCE-GITRLFHAFVKERGCLTKAVKEDIIDCCQKTVRLEDAFIDLAFEQGPVPG 247 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 ++A ++Y+++IA+ R Q+GL ++ ++P PW++ +++ + NFFETR TEY + Sbjct: 248 MSAKEIKRYIRYIADWRLSQLGLPAIYMIEDHPLPWLAPLLNGVEHANFFETRATEYSKA 307 Query: 120 A 120 A Sbjct: 308 A 308 >gi|195485577|ref|XP_002091148.1| GE13485 [Drosophila yakuba] gi|194177249|gb|EDW90860.1| GE13485 [Drosophila yakuba] Length = 393 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +++ ++ +A +E + + +P +G+N Sbjct: 268 RDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+R ++G+ ++ T+NPF +M E+I L + NFFE +V EYQ+ Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVGEYQR 375 >gi|116191729|ref|XP_001221677.1| hypothetical protein CHGG_05582 [Chaetomium globosum CBS 148.51] gi|88181495|gb|EAQ88963.1| hypothetical protein CHGG_05582 [Chaetomium globosum CBS 148.51] Length = 409 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +Q ++ +A +E + E +P +G+N Sbjct: 271 RDEGLHTDFACLLFS-------HLNNRPSKQIIEDIIVDAVRIEQEFLTEALPCALLGMN 323 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + +QY++F+A+R +G E +++ T NPF +M E I L + NFFE RV EYQ+ Sbjct: 324 SNLMKQYIEFVADRLLVALGNEKVYRST-NPFDFM-ENISLGGKTNFFEKRVGEYQKAG 380 >gi|325663145|ref|ZP_08151595.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae bacterium 4_1_37FAA] gi|325470599|gb|EGC73829.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae bacterium 4_1_37FAA] Length = 347 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 67/125 (53%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +++ +++ E P L+++E +++ R M+ E EIA+ H + GL+ Sbjct: 219 RDENTHLWLFTNILRELRKELPELFSEEKEKEYRQMIREGCEQEIAWGHYVIGDAVSGLS 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y++++ N RC +GL P+++ E W+S+ + K +FFE + T Y Sbjct: 279 CDMITDYVKYLGNLRCKNLGLAPIYEGHEKEPESMGWVSQFSNANMIKTDFFEAKSTAYA 338 Query: 118 QGAEL 122 + + L Sbjct: 339 KSSAL 343 >gi|18079279|ref|NP_525111.1| ribonucleoside diphosphate reductase small subunit [Drosophila melanogaster] gi|12644287|sp|P48592|RIR2_DROME RecName: Full=Ribonucleoside-diphosphate reductase subunit M2; AltName: Full=Ribonucleotide reductase small subunit gi|10727628|gb|AAF58599.2| ribonucleoside diphosphate reductase small subunit [Drosophila melanogaster] gi|15292183|gb|AAK93360.1| LD41588p [Drosophila melanogaster] gi|220946286|gb|ACL85686.1| CG8975-PA [synthetic construct] gi|220955972|gb|ACL90529.1| RnrS-PA [synthetic construct] Length = 393 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +++ ++ +A +E + + +P +G+N Sbjct: 268 RDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+R ++G+ ++ T+NPF +M E+I L + NFFE +V EYQ+ Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVGEYQR 375 >gi|194883840|ref|XP_001976005.1| GG22616 [Drosophila erecta] gi|190659192|gb|EDV56405.1| GG22616 [Drosophila erecta] Length = 393 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ ++ +A +E + + +P +G+N Sbjct: 268 RDEGLHCDFAVLMFQ-------HLVQRPKHERIIEIIRDAVAIEQEFLTDALPVNLIGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+R ++G+ ++ T+NPF +M E+I L + NFFE +V EYQ+ Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVAEYQR 375 >gi|269105083|ref|ZP_06157778.1| ribonucleotide reductase 2 [Photobacterium damselae subsp. damselae CIP 102761] gi|268160718|gb|EEZ39216.1| ribonucleotide reductase 2 [Photobacterium damselae subsp. damselae CIP 102761] Length = 310 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 16/129 (12%) Query: 2 RDESLHLNFG---IDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58 RDE LH +F + Q K+ QQ+ + EA +E + E +P + Sbjct: 190 RDEGLHFSFSALLFKTLGQGKVT---------QQEFEEICREAVSIEKEFVTEALPVDLI 240 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ- 117 G+NA QY++ A+ G +P+F Y +NPF +M ++D++ + NFFE RVTEY+ Sbjct: 241 GMNAELMCQYIEHTADVIAGLFGFDPIF-YAKNPFDYM-RLLDMEGKTNFFEKRVTEYKR 298 Query: 118 -QGAELKWD 125 Q +L +D Sbjct: 299 PQDRQLSFD 307 >gi|50311465|ref|XP_455757.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49644893|emb|CAG98465.1| KLLA0F15103p [Kluyveromyces lactis] Length = 401 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 11/120 (9%) Query: 2 RDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 RDE LH +F + +K + NP + K ++ EA +E Y + +P +G+ Sbjct: 271 RDEGLHTDFACLLFAHLKNKPNPEIVEK--------IITEAVEIEKRYFMDALPVSLLGM 322 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA QY++F+A+R +G + F T NPF +M E I L + NFFE RV++YQ+ Sbjct: 323 NADLMNQYVEFVADRLLVALGNKKYFNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380 >gi|15232077|ref|NP_189342.1| TSO2 (TSO meaning 'ugly' in Chinese); oxidoreductase/ ribonucleoside-diphosphate reductase/ transition metal ion binding [Arabidopsis thaliana] gi|75273949|sp|Q9LSD0|RIR2C_ARATH RecName: Full=Ribonucleoside-diphosphate reductase small chain C; AltName: Full=Ribonucleoside-diphosphate reductase TSO2 subunit; AltName: Full=Ribonucleotide reductase small subunit C gi|9279629|dbj|BAB01087.1| ribonucleotide reductase [Arabidopsis thaliana] gi|17380726|gb|AAL36193.1| putative ribonucleotide reductase small subunit [Arabidopsis thaliana] gi|21436297|gb|AAM51287.1| putative ribonucleotide reductase small subunit [Arabidopsis thaliana] gi|332643740|gb|AEE77261.1| Ribonucleoside-diphosphate reductase small chain C [Arabidopsis thaliana] Length = 332 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 67/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +K + +++ ++++ +A +E + + +P VG+N Sbjct: 201 RDEGLHCDFACLLYTLLKTKLS-------EERVKSIVCDAVEIEREFVCDALPCALVGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G ++ T NPF WM E+I L+ + NFFE RV +YQ+ + Sbjct: 254 RDLMSQYIEFVADRLLGALGYGKVYGVT-NPFDWM-ELISLQGKTNFFEKRVGDYQKASV 311 Query: 122 LK 123 + Sbjct: 312 MS 313 >gi|322510501|gb|ADX05815.1| putative ribonucleotide reductase small subunit [Organic Lake phycodnavirus 1] Length = 324 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/116 (33%), Positives = 74/116 (63%), Gaps = 9/116 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+LH F + + ++++ K ++K R ++ EA ++E + E++P +G+N Sbjct: 201 RDEALHTEFAVHLFHKLE-------KKINKKKIREIIEEAVVIEKEFIVESLPCRLIGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + QY++++A+R Q+G E +++ T NPF +M E+I L+++ NFFE+RV+EY Sbjct: 254 SDLMTQYIEYVADRLMIQLGCEEIYR-TNNPFDFM-ELISLEQKTNFFESRVSEYS 307 >gi|157939640|ref|YP_001497012.1| ribonucleotide reductase [Tanapox virus] gi|146746356|gb|ABQ43492.1| ribonucleotide reductase [Tanapox virus] gi|146746512|gb|ABQ43647.1| ribonucleotide reductase [Tanapox virus] Length = 325 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F I HL R ++ EA +E + E +P +G+N Sbjct: 200 RDEGLHCDFAC-------IMFKHLLNPPLNSVVRDIIIEAVNIEKNFLTEAIPVKLIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+A+R ++G + ++NPF +M E I L+ + NFFE RV+EYQ+ Sbjct: 253 CDLMKQYIEFVADRLLLELGCNKYY-CSKNPFDFM-ENISLEGKTNFFEKRVSEYQK 307 >gi|332876813|ref|ZP_08444570.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332685239|gb|EGJ58079.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 324 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 8/117 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++ R ++ +A +E + + +P +G+N Sbjct: 197 RDEGLHCDFAC------LLYVNHLQNKLSEETIREIIVDAVAIEKEFVTDALPVKLIGMN 250 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 A QY++F+A+R +G ++ T NPF +M E+I L+ + NFFE RV EYQ+ Sbjct: 251 AELMCQYIEFVADRLLVALGCNKVWNAT-NPFDFM-ELISLQGKTNFFERRVGEYQK 305 >gi|325953830|ref|YP_004237490.1| ribonucleoside-diphosphate reductase [Weeksella virosa DSM 16922] gi|323436448|gb|ADX66912.1| Ribonucleoside-diphosphate reductase [Weeksella virosa DSM 16922] Length = 323 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 68/120 (56%), Gaps = 10/120 (8%) Query: 2 RDESLHLNFG-IDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 RDE LH +F + +N +K + P ++ + ++ +A +E + E +P +G+ Sbjct: 196 RDEGLHCDFACLLYVNHLKNKLP-------EETVQKIIADAVEVEKEFVTEALPVRLIGM 248 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA QY++F+A+R +G + ++ T NPF +M E+I L+ + NFFE RV EYQ+ Sbjct: 249 NAELMCQYIEFVADRLLDALGCKKVWNAT-NPFDFM-ELISLQGKTNFFERRVGEYQKSG 306 >gi|212697417|ref|ZP_03305545.1| hypothetical protein ANHYDRO_01987 [Anaerococcus hydrogenalis DSM 7454] gi|325846383|ref|ZP_08169352.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|212675609|gb|EEB35216.1| hypothetical protein ANHYDRO_01987 [Anaerococcus hydrogenalis DSM 7454] gi|325481567|gb|EGC84607.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 352 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +IN +K E P L+T E ++ ++L E EIA+ + GLN Sbjct: 224 RDENTHLWLFRSMINDLKEERPDLFTDELKEFYLSLLKEGVEQEIAWGKYAIGDEIQGLN 283 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 + E Y++++ N R +GL +++ Y E P W+SE D + K +FFE +V+ Y Sbjct: 284 SQMIEDYIKYLGNLRAKGLGLGKIYEGYEEEPQSMKWVSEYSDPNQVKTDFFEGKVSAYS 343 Query: 118 QGAELKWD 125 + + ++ D Sbjct: 344 KSSVIEDD 351 >gi|19881429|ref|NP_612246.1| putative ribonucleotide reductase small subunit [Infectious spleen and kidney necrosis virus] gi|19773634|gb|AAL98748.1|AF371960_24 putative ribonucleotide reductase small subunit [infectious spleen and kidney necrosis virus] Length = 312 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + Q+ K Q + ++ +A +E A+ E + +G+N Sbjct: 188 RDEGLHCDFACMLFRQMA-------NKPCQDDAHQIISDAVDIETAFFQEALKTPLLGMN 240 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + S Y+QF+A+R +G ++ NPF +M I ++ + NFFE RV+EYQ+ Sbjct: 241 SDSMRLYIQFVADRLLDALGYAKMYN-VANPFDFMDN-ISIEGKTNFFERRVSEYQR 295 >gi|74229799|ref|YP_309003.1| ribonucleotide reductase small subunit (rr2) [Trichoplusia ni SNPV] gi|72259713|gb|AAZ67484.1| ribonucleotide reductase small subunit (rr2) [Trichoplusia ni SNPV] Length = 318 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 6/117 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F N+ + L + K M EA +E + +P +G+N Sbjct: 194 RDEGLHTDFACLYYNKYIAKEDKLS----ESKVLNMFKEAVDIEKDFFTNALPVAMLGMN 249 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 A S +Y++F+A+R ++G E FK T NPF +M+ I L+ + NFFE RV EY++ Sbjct: 250 AHSMCEYIEFVADRLLIELGYEKYFK-TLNPFEFMNN-ISLEGKTNFFEKRVGEYKR 304 >gi|94495782|ref|ZP_01302361.1| ribonucleotide reductase beta subunit [Sphingomonas sp. SKA58] gi|94424474|gb|EAT09496.1| ribonucleotide reductase beta subunit [Sphingomonas sp. SKA58] Length = 350 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 2/121 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDE+LH GI + ++ T + M + +E A+ G V G Sbjct: 189 VRDETLHCE-GIVRLFHAFVKERDCLTASVKDDIMDMCQKTVRIEDAFVDLVFEMGPVPG 247 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + ++Y+++IA+ R Q+GL+P++ E+P PW++ +++ + NFFETR TEY + Sbjct: 248 MTPKDIKKYVRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANFFETRSTEYSKA 307 Query: 120 A 120 A Sbjct: 308 A 308 >gi|195027582|ref|XP_001986661.1| GH20400 [Drosophila grimshawi] gi|193902661|gb|EDW01528.1| GH20400 [Drosophila grimshawi] Length = 393 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 66/117 (56%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +++ ++ +A +E + + +P +G+N Sbjct: 268 RDEGLHCDFAVMMFQ-------HLVQRPSRERIIEIVSDAVTIEQEFLTDALPVNLIGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +Y++F+A+R ++G+ ++ T+NPF +M E+I L + NFFE +V EYQ+ Sbjct: 321 CALMSEYIEFVADRLLVELGVGKIYN-TKNPFTFM-EMISLDGKTNFFEKKVGEYQR 375 >gi|190896568|gb|ACE96797.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896580|gb|ACE96803.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEEQVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-AANPFDWM-ELISLQGKTNFFEKRVGEY 223 >gi|138894466|ref|YP_001124919.1| ribonucleoside-diphosphate reductase subunit beta [Geobacillus thermodenitrificans NG80-2] gi|196247935|ref|ZP_03146637.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. G11MC16] gi|134265979|gb|ABO66174.1| Ribonucleoside-diphosphate reductase beta subunit [Geobacillus thermodenitrificans NG80-2] gi|196212719|gb|EDY07476.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. G11MC16] Length = 344 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H++ + ++ E P T E +R+ +A LEI +A E + G++ Sbjct: 216 RDEHIHVDLFAKIFKEVLNEYPEYRTPELADFARSTFMKAAELEIEWAGEIIGNDIDGID 275 Query: 62 APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEKNFFETRVTEYQQ 118 E Y++F AN R HQ+G + P Y NP W+ E +DL K +FFE + +Y + Sbjct: 276 LADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGK-SDFFEQKPRQYTK 334 >gi|148912897|ref|YP_001293211.1| hypothetical protein GTPV_gp017 [Goatpox virus Pellor] Length = 321 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +K + + +++EA +E + +P +G+N Sbjct: 196 RDEGLHCDFACLIFKHLKYPPSN-------DIIKIIINEAVSIEKEFLTNIIPVKLIGMN 248 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++FIA+R ++G + +F T NPF +M E I L+ + NFFE RV+EYQ+ Sbjct: 249 CDLMSQYIEFIADRLLLELGCDKVFMST-NPFDFM-ENISLEGKTNFFEKRVSEYQK 303 >gi|190896572|gb|ACE96799.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896574|gb|ACE96800.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896576|gb|ACE96801.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896578|gb|ACE96802.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEEQVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFFEKRVGEY 223 >gi|320536436|ref|ZP_08036471.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema phagedenis F0421] gi|320146705|gb|EFW38286.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema phagedenis F0421] Length = 363 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +++ E P L+T E + R M+ E EI + H + GLN Sbjct: 235 RDENTHLWLFRSIIQELQKEEPQLFTPENIEMFRAMIKEGCEQEIKWGHYVIGDDIPGLN 294 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y+Q++ N RC +G EPL++ + E P W+S+ + K +FFE + T Y Sbjct: 295 KQMITDYIQYLGNLRCENLGFEPLYEGHREEPASMSWVSQYSNANLIKTDFFEAKSTAYA 354 Query: 118 QGAEL 122 + + + Sbjct: 355 KSSAM 359 >gi|190896570|gb|ACE96798.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896582|gb|ACE96804.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEEQVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-AANPFDWM-ELISLQGKTNFFEKRVGEY 223 >gi|308806626|ref|XP_003080624.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus tauri] gi|116059085|emb|CAL54792.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus tauri] Length = 241 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F ++ Q+ P ++ R ++ EA +E + +++P VG+N Sbjct: 113 RDEGLHRDFAC-LLYQMLNNKPD------EEVVRKIVTEAVEIEKEFVCDSLPCALVGMN 165 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A Y++++A+ +G+ P T NPF WM E+I L+ + NFFE RV EYQ+ Sbjct: 166 AGMMSDYIEYVADHLFTSLGM-PKEYNTANPFDWM-ELISLQGKTNFFEKRVGEYQKAG 222 >gi|312381384|gb|EFR27142.1| hypothetical protein AND_06323 [Anopheles darlingi] Length = 390 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 66/117 (56%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ ++ +A ++E + + +P +G+N Sbjct: 265 RDEGLHCDFACLMFK-------YLVQKPSRKRVTDIIRDAVMIEQEFLTKALPVDMLGMN 317 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+R ++G E ++ T+NPF +M E I L+ + NFFE +V EYQ+ Sbjct: 318 CELMSQYIEFVADRLLVELGCEKVYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQK 372 >gi|255080138|ref|XP_002503649.1| predicted protein [Micromonas sp. RCC299] gi|226518916|gb|ACO64907.1| predicted protein [Micromonas sp. RCC299] Length = 324 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 13/120 (10%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59 RDE LH +F + + +K ++ L + ++ +A +E + + + VG Sbjct: 192 RDEGLHCDFACLLYSMLKHPLDPARL---------QEIVKDAVDIEKEFVCDALSCALVG 242 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +NA +Y++F+A+R Q+G+E ++ T NPF WM E+I L+ + NFFE RV +YQ+ Sbjct: 243 MNADLMSEYIEFVADRLMTQLGVEKVWN-TPNPFEWM-EMISLQGKANFFEHRVDQYQKA 300 >gi|156839886|ref|XP_001643629.1| hypothetical protein Kpol_478p6 [Vanderwaltozyma polyspora DSM 70294] gi|156114248|gb|EDO15771.1| hypothetical protein Kpol_478p6 [Vanderwaltozyma polyspora DSM 70294] Length = 394 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL K ++ EA +E Y + +P +G+N Sbjct: 264 RDEGLHTDFASLLFS-------HLDNKPDPAIVEKIVTEAVEIEKRYFIDALPVALLGMN 316 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R G E +K ENPF +M E I L + NFFE RV++YQ+ + Sbjct: 317 AKLMNQYVEFVADRLLVSFGNEKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAS 373 >gi|68161126|gb|AAY86994.1| ribonucleotide reductase M2b [Ictalurus punctatus] Length = 192 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 64/114 (56%), Gaps = 9/114 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH NF + +Q++ K + + ++ +A +E + E +P +G+N Sbjct: 88 RDEGLHCNFACLIYSQLQ-------KKPSADRVKDIITKAVRIEQEFLTEALPVDLIGIN 140 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 + +QY++F+A+R +G+ +++ ENPF +M E I L+ + NFFE RV E Sbjct: 141 SYLMKQYIEFVADRLLTDLGIPKVYE-AENPFDFM-EFISLEGKTNFFEKRVAE 192 >gi|313844096|ref|YP_004061759.1| hypothetical protein OlV1_126 [Ostreococcus lucimarinus virus OlV1] gi|312599481|gb|ADQ91503.1| hypothetical protein OlV1_126 [Ostreococcus lucimarinus virus OlV1] Length = 408 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 65/115 (56%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH F +++ ++I K + +++ EA +E + + +P +G+N Sbjct: 287 RDEGLHQEFAVELFKLLRI-------KPTTETIHSIVKEAVEIEKGFILDALPCALIGMN 339 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 + +Y++++++R QIG+ P++ ++NPF +M E I L + NFFE RV +Y Sbjct: 340 SEKMSEYIEYVSDRLLKQIGVPPIWN-SKNPFDFM-ENISLDGKTNFFEKRVGDY 392 >gi|294463759|gb|ADE77404.1| unknown [Picea sitchensis] Length = 289 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 68/119 (57%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +K +K +++ + ++ +A +E + E + VG+N Sbjct: 160 RDEGLHCDFACLLYSLLK-------SKLSEERVKAIVRDAVDIEREFVCEALSCDLVGMN 212 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++FIA+R +G ++ + ENPF WM ++I L+ + NFFE RV +YQ+ + Sbjct: 213 ATLMSQYIKFIADRLLVALGHGKMY-HVENPFDWM-DLISLQGKTNFFERRVGDYQKAS 269 >gi|85375147|ref|YP_459209.1| ribonucleotide-diphosphate reductase subunit beta [Erythrobacter litoralis HTCC2594] gi|84788230|gb|ABC64412.1| ribonucleotide reductase beta subunit [Erythrobacter litoralis HTCC2594] Length = 356 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 67/121 (55%), Gaps = 2/121 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDESLH + + ++ + +TK ++ + ++ LE + G V G Sbjct: 189 VRDESLHCEGIVRLFHEF-VRERDCYTKAVKEDIIDICQKSVRLEDNFIDLAFEMGPVSG 247 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + ++Y+++IA+ R Q+GL+P++ ++P PW++ +++ + NFFE R TEY +G Sbjct: 248 MTPKEIKKYIRYIADWRLGQLGLQPIYMVDDHPLPWLAPLLNGVEHANFFEQRATEYSKG 307 Query: 120 A 120 A Sbjct: 308 A 308 >gi|56551339|ref|YP_162178.1| ribonucleotide-diphosphate reductase subunit beta [Zymomonas mobilis subsp. mobilis ZM4] gi|241760992|ref|ZP_04759081.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753042|ref|YP_003225935.1| ribonucleotide-diphosphate reductase subunit beta [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|56542913|gb|AAV89067.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp. mobilis ZM4] gi|241374611|gb|EER64072.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552405|gb|ACV75351.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 345 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 2/121 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDESLH GI + + TK+ + + +E A+ G V G Sbjct: 189 VRDESLHCE-GIIRLFHTFCQERQCLTKQVKDDILNICQRTVRIEDAFIDLVFEMGPVEG 247 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + ++Y+++IA+ R Q+GL P++ E+P PW++ +++ + NFFETR TEY + Sbjct: 248 MTPKEIKKYIRYIADWRLGQLGLSPIYMIEEHPLPWLTPLLNGVEHANFFETRSTEYSKA 307 Query: 120 A 120 A Sbjct: 308 A 308 >gi|62421216|gb|AAX82336.1| ribonucleotide reductase small chain [Orange-spotted grouper iridovirus] Length = 312 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + Q+ K Q + ++ +A +E A+ E + +G+N Sbjct: 188 RDEGLHCDFACMLFRQMA-------NKPCQDDAHEIISDAVDIETAFFREALKTPLLGMN 240 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + S + Y+QF+A+R +G ++ NPF +M I ++ + NFFE RV+EYQ+ Sbjct: 241 SDSMKLYIQFVADRLLDALGYAKMYN-VGNPFDFMDN-ISIEGKTNFFERRVSEYQR 295 >gi|170032272|ref|XP_001844006.1| ribonucleoside-diphosphate reductase small chain [Culex quinquefasciatus] gi|167872122|gb|EDS35505.1| ribonucleoside-diphosphate reductase small chain [Culex quinquefasciatus] Length = 391 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 66/117 (56%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ ++ EA ++E + + +P +G+N Sbjct: 266 RDEGLHTDFACLMFR-------YLVQKPSKERVLEIIREAVVIEQEFLTKALPVDLLGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+R ++G E ++ T+NPF +M E I L+ + NFFE +V EYQ+ Sbjct: 319 CELMSQYIEFVADRLLLELGNEKIYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQK 373 >gi|50237508|gb|AAT71841.1| ribonucleotide reductase small chain [Rock bream iridovirus] Length = 312 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + Q+ K Q + ++ +A +E A+ E + +G+N Sbjct: 188 RDEGLHCDFACMLFRQMA-------NKPCQDDAHEIISDAVDIETAFFREALKTPLLGMN 240 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + S + Y+QF+A+R +G ++ NPF +M I ++ + NFFE RV+EYQ+ Sbjct: 241 SDSMKLYIQFVADRLLDALGYAKMYN-VGNPFDFMDN-ISIEGKTNFFERRVSEYQR 295 >gi|38683666|gb|AAR26843.1| FirrV-1-A19 [Feldmannia irregularis virus a] Length = 342 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH + + N +K P + + +A LE + E++P +G+N Sbjct: 217 RDEGLHAEGSVMIYNHLKHRLPVAVVHD-------IFTDAVALEKEFIRESLPVSLIGIN 269 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A + Y++++++ ++G LF T+NPF WM+ +I ++ + NFFE RV EY + Sbjct: 270 ADTMSSYIEYVSDFWIQRLGYPKLFG-TKNPFEWMT-MIGMEGKSNFFEGRVAEYAKAGS 327 Query: 122 L 122 + Sbjct: 328 M 328 >gi|9633826|ref|NP_051904.1| gp015L [Rabbit fibroma virus] gi|6578545|gb|AAF17899.1|AF170722_17 gp015L [Rabbit fibroma virus] Length = 322 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL + ++ ++ EA ++E + + +P +G+N Sbjct: 198 RDEGLHCDFACLMFK-------HLNHTPSETRATDIIKEAVVIEQQFLTKALPVRLIGIN 250 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+R ++G +F T NPF +M E I L+ + NFFE RV++YQ+ Sbjct: 251 CDLMCQYIEFVADRLVTELGYSKIFSAT-NPFDFM-ENISLEGKTNFFEKRVSDYQR 305 >gi|254586079|ref|XP_002498607.1| ZYRO0G14388p [Zygosaccharomyces rouxii] gi|238941501|emb|CAR29674.1| ZYRO0G14388p [Zygosaccharomyces rouxii] Length = 412 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL + ++ EA +E Y + +P +G+N Sbjct: 284 RDEGLHTDFACLLF-------AHLKNRPSPDIVERIITEAVSIEKRYFEDALPVALLGMN 336 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G E + T NPF +M E I L + NFFE RV++YQ+ Sbjct: 337 AALMNQYVEFVADRLLVALGNEKYYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 393 >gi|308485547|ref|XP_003104972.1| hypothetical protein CRE_24501 [Caenorhabditis remanei] gi|308257293|gb|EFP01246.1| hypothetical protein CRE_24501 [Caenorhabditis remanei] Length = 323 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +I ++ P ++ ++ EA +E+ + + +P +G+N Sbjct: 198 RDEGLHRDFACLLFTKI-VDKPS------REIVCEIVDEAVTIELEFLDQALPVNVIGMN 250 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++++A+ ++G E L+ +T NPF +M E I + + NFFE RV+EYQ+ Sbjct: 251 YTLMSQYIKYVADHLLEELGFEKLY-HTINPFDFM-ENISIDGKTNFFEKRVSEYQRSG 307 >gi|303272255|ref|XP_003055489.1| predicted protein [Micromonas pusilla CCMP1545] gi|226463463|gb|EEH60741.1| predicted protein [Micromonas pusilla CCMP1545] Length = 322 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +K H E Q+ ++ +A +E + + + VG+N Sbjct: 192 RDEGLHCDFACLLYSMLK----HPLEPERLQE---IVKDAVEIEKEFVCDALSCALVGMN 244 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A +Y++F+A+R Q+G++ ++ T NPF WM E I L+ + NFFE RV EYQ+ Sbjct: 245 ADLMSEYIEFVADRLLVQLGVDKVWN-TPNPFDWM-ESISLQGKTNFFERRVGEYQRNG 301 >gi|10432587|dbj|BAB13815.1| ribonucleotide reductase small subunit [Lentinula edodes] Length = 418 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + ++ PH T E ++ EA +E + + +P +G+N Sbjct: 287 RDEGMHTDFACLLFSHLR-RRPHPDTVE------RIIKEAVAIEQEFLTDALPVSLIGMN 339 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G + L+ T NPF +M ++I L+ + NFFE RV++Y + Sbjct: 340 ATLMCQYIEFVADRLLVALGNKKLYNST-NPFDFM-DMISLQGKTNFFEKRVSDYSKAG 396 >gi|327403795|ref|YP_004344633.1| Ribonucleoside-diphosphate reductase [Fluviicola taffensis DSM 16823] gi|327319303|gb|AEA43795.1| Ribonucleoside-diphosphate reductase [Fluviicola taffensis DSM 16823] Length = 324 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 67/119 (56%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +++ + ++ +A +E + + +P +G+N Sbjct: 198 RDEGLHCDFACLLYTK------HLIHQLSKEQVQEIILDAVEIEKEFVTDALPVKLIGMN 251 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R ++G +F T NPF +M ++I ++ + NFFE RV EYQ+ Sbjct: 252 ADLMAQYIEFVADRLLTELGNPKVFN-TTNPFDFM-DMISIQGKTNFFEKRVAEYQKSG 308 >gi|187607401|ref|NP_001119973.1| ribonucleotide reductase M2 B (TP53 inducible) [Xenopus (Silurana) tropicalis] gi|165971068|gb|AAI58191.1| LOC100144925 protein [Xenopus (Silurana) tropicalis] Length = 346 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +L K +++ ++ A +E + E +P +G+N Sbjct: 221 RDEGLHTDFACLMFH-------YLVKKPTEERVTEIIVNAVRIEQEFLTEALPVSLIGMN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + Y++F+A+R ++G FK ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 274 CTLMKTYIEFVADRLLVELGCSKAFK-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 330 >gi|302678465|ref|XP_003028915.1| hypothetical protein SCHCODRAFT_83117 [Schizophyllum commune H4-8] gi|300102604|gb|EFI94012.1| hypothetical protein SCHCODRAFT_83117 [Schizophyllum commune H4-8] Length = 331 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + ++ PH R ++ EA +E + + +P +G+N Sbjct: 202 RDEGMHTDFACLLFAHLR-RRPH------PDVVRRIIMEAVTIEQEFLTDALPVSLIGMN 254 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G E ++ T NPF +M ++I L+ + NFFE RV++Y+ A Sbjct: 255 STLMCQYIEFVADRLLVALGNEKVYNVT-NPFDFM-DMISLQGKTNFFEKRVSDYKMAA 311 >gi|47213105|emb|CAF89525.1| unnamed protein product [Tetraodon nigroviridis] Length = 198 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K Q ++ A +E + E +P +G+N Sbjct: 73 RDEGLHCDFACLMFK-------HLLHKPSAQTVGAIIRNAVEIEQEFLTEALPVKLIGMN 125 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 ++Y++F+A+R ++G +++ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 126 CQLMKRYIEFVADRLLLELGFAKIYR-AENPFDFM-ENISLEGKTNFFEKRVGEYQR 180 >gi|195436539|ref|XP_002066225.1| GK22247 [Drosophila willistoni] gi|194162310|gb|EDW77211.1| GK22247 [Drosophila willistoni] Length = 395 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +++ ++ +A +E + +P +G+N Sbjct: 270 RDEGLHCDFAVLMFQ-------HLVQRPSRERIIEIIRDAVQIEQEFLTVALPVNLIGMN 322 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+R ++G+ ++ T+NPF +M E+I L + NFFE +V EYQ+ Sbjct: 323 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFSFM-EMISLDGKTNFFEKKVGEYQR 377 >gi|167760514|ref|ZP_02432641.1| hypothetical protein CLOSCI_02888 [Clostridium scindens ATCC 35704] gi|167661880|gb|EDS06010.1| hypothetical protein CLOSCI_02888 [Clostridium scindens ATCC 35704] Length = 347 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +++ ++K E P L+T+ ++ R M+ E EI++ H + GLN Sbjct: 219 RDENTHLWLFRNILLELKKEEPQLFTESRIEEYREMIKEGCQQEISWGHYVIGDDIQGLN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y+Q++ N RC +G P+++ + + P W+S+ + K +FFE R T Y Sbjct: 279 RDMVTDYIQYLGNLRCTNLGFAPIYEGHVKEPDSMSWVSQFSNANMIKTDFFEARSTAYA 338 Query: 118 QGAEL 122 + + L Sbjct: 339 KSSAL 343 >gi|154296564|ref|XP_001548712.1| ribonucleotide reductase small subunit [Botryotinia fuckeliana B05.10] gi|150843273|gb|EDN18466.1| ribonucleotide reductase small subunit [Botryotinia fuckeliana B05.10] Length = 407 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +Q + ++ EA +E + E +P +G+N Sbjct: 266 RDEGLHTDFACLLFS-------HLKHRPSKQAVQDVITEAVEIEQEFLTEALPCALLGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + +QY++F+A+R +G + +K + NPF +M E I L + NFFE RV +YQ+ Sbjct: 319 SNLMKQYIEFVADRLLLSLGNDKYYK-SANPFDFM-ENISLAGKTNFFEKRVGDYQKAG 375 >gi|323450429|gb|EGB06310.1| hypothetical protein AURANDRAFT_65685 [Aureococcus anophagefferens] Length = 349 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + ++++ + P + ++ +A +E + +P +G+N Sbjct: 224 RDEGMHCDFACLLYSKLRNKLP-------VETINALIGDAVTIEKEFVVSALPVELIGMN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + + QY++F A+R +G L++ T NPF WM E+I L+ + NFFE RV EY + Sbjct: 277 SRTMCQYIEFCADRLLLALGCPKLYEAT-NPFDWM-ELISLQGKTNFFEKRVGEYAKSG 333 >gi|256545921|ref|ZP_05473276.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus vaginalis ATCC 51170] gi|256398343|gb|EEU11965.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus vaginalis ATCC 51170] Length = 352 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +IN +K E P L+T E ++ ++L E EIA+ + GLN Sbjct: 224 RDENTHLWLFRSMINDLKEERPDLFTDELKEFYLSLLKEGVEQEIAWGKYAIGDEIQGLN 283 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 + E Y++++ N R +GL +++ Y + P W+SE D + K +FFE +V+ Y Sbjct: 284 SQMIEDYIKYLGNLRAKGLGLGTIYEGYEDEPQSMKWVSEYSDPNQVKTDFFEGKVSAYS 343 Query: 118 QGAELKWD 125 + + ++ D Sbjct: 344 KSSVIEDD 351 >gi|308184827|ref|YP_003928960.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori SJM180] gi|308060747|gb|ADO02643.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori SJM180] Length = 341 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 64/120 (53%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E+++ +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEVSWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ +++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 >gi|283481249|emb|CAZ69365.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi virus 99B1] Length = 325 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K + ++ A LE + E +P +G+N Sbjct: 196 RDEGLHTDFAC------MLYRNHIIHKLPYETVLDIITNAVELERLFICEALPVSLIGIN 249 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A S Y++F+A+R +G + NPF WM E+I L+ + NFFE RV EYQ+ Sbjct: 250 AESMSTYIKFVADRLLISLGYAKHYNVV-NPFEWM-ELISLEGKTNFFEKRVGEYQKAG 306 >gi|255323570|ref|ZP_05364700.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter showae RM3277] gi|255299284|gb|EET78571.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter showae RM3277] Length = 340 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+T E + K M A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRTERPDLFTPETEAKIYDMFERAGELEIKWGKYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 EQY++++ ++R IGL+ + +P W+ + +K NFFE +VT Y +G+ Sbjct: 276 DDIIEQYIRYLIDQRLVAIGLKRRYN-VPHPIKWVDDFAKFNDQKSNFFEAKVTNYSKGS 334 >gi|197322443|ref|YP_002154716.1| putative ribonucleotide reductase small subunit [Feldmannia species virus] gi|197130510|gb|ACH46846.1| putative ribonucleotide reductase small subunit [Feldmannia species virus] Length = 342 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH + + N +K P + + +AT +E + E +P +G+N Sbjct: 217 RDEGLHAEGSVMIYNHLKHRLPVAVVHD-------IFGQATTIEKEFIREALPVSLIGIN 269 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A + Y+++I++ ++G LF ++NPF WM+ +I ++ + NFFE RV EY + Sbjct: 270 AGTMSTYIEYISDFWLEKLGYPKLFN-SKNPFEWMT-MIGMEGKSNFFEGRVAEYSKAGS 327 Query: 122 L 122 + Sbjct: 328 M 328 >gi|148554425|ref|YP_001262007.1| ribonucleotide-diphosphate reductase subunit beta [Sphingomonas wittichii RW1] gi|148499615|gb|ABQ67869.1| Ribonucleoside-diphosphate reductase [Sphingomonas wittichii RW1] Length = 350 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 2/121 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDE+LH GI + ++ T + M + +E A+ G V G Sbjct: 189 IRDETLHCE-GIVRLFHAFVKERDCLTASVKDDILDMCQKTVRIEDAFIDLVFEMGPVNG 247 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + ++Y+++IA+ R Q+GL+P++ ++P PW++ +++ + NFFETR TEY + Sbjct: 248 MTPKDIKKYVRYIADWRLGQLGLKPIYMIEDHPLPWLAPLLNGVEHANFFETRATEYSKA 307 Query: 120 A 120 A Sbjct: 308 A 308 >gi|310798394|gb|EFQ33287.1| ribonucleotide reductase [Glomerella graminicola M1.001] Length = 413 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +Q + ++ +A +E + E +P +G+N Sbjct: 275 RDEGLHTDFACLLYS-------HLKNRPSKQVIQDIIVDAVQIEQEFLTEALPCALLGMN 327 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + +QY++F+A+R +G + ++K + NPF +M E I L + NFFE RV +YQ+ Sbjct: 328 SNLMKQYIEFVADRLLVALGNDKVYK-SSNPFDFM-ENISLGGKTNFFEKRVADYQKAG 384 >gi|73852496|ref|YP_293780.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi virus 86] gi|72415212|emb|CAI65449.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi virus 86] Length = 325 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K + ++ A LE + E +P +G+N Sbjct: 196 RDEGLHTDFAC------MLYRNHIIHKLPYETVLDIITNAVELERLFICEALPVSLIGIN 249 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A S Y++F+A+R +G + NPF WM E+I L+ + NFFE RV EYQ+ Sbjct: 250 AESMSTYIKFVADRLLISLGYAKHYNVV-NPFEWM-ELISLEGKTNFFEKRVGEYQKAG 306 >gi|323452425|gb|EGB08299.1| hypothetical protein AURANDRAFT_59025 [Aureococcus anophagefferens] Length = 319 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 9/118 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++++ K + +++ A +E ++ +P +G+N Sbjct: 194 RDEGLHCDFACLLYSKLR-------KKLSDVQVASIVGAAVDIEKSFVVSALPVELIGMN 246 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + S +Y++F A+R ++G L+ T NPF WM E+I L+ + NFFE RV EY + Sbjct: 247 SKSMCKYIEFCADRLLLELGYSTLYGAT-NPFDWM-ELISLQGKTNFFEKRVGEYAKA 302 >gi|213511642|ref|NP_001133495.1| Ribonucleoside-diphosphate reductase subunit M2 [Salmo salar] gi|209154228|gb|ACI33346.1| Ribonucleoside-diphosphate reductase subunit M2 [Salmo salar] Length = 387 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++ ++ A +E + + +P +G+N Sbjct: 262 RDEGLHCDFACLMFK-------HLVHKPSKETVTKLIRNAVEIEQEFLTKALPVKLIGMN 314 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+R ++G + +++ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 315 CDLMTQYIEFVADRLMLELGFDKIYR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 369 >gi|319655055|ref|ZP_08009124.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp. 2_A_57_CT2] gi|317393250|gb|EFV74019.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp. 2_A_57_CT2] Length = 345 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H++ + + +I ENP L T E + + A LEI +A + + G+ Sbjct: 217 RDEQIHVDLFVKIFKEILQENPELNTNELSKFVQETFKRAAELEIEWARDVIGSKTEGIL 276 Query: 62 APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEKNFFETRVTEYQQ 118 E Y++F AN RC+Q+G E P Y NP W+ E +D K +FFE + +Y + Sbjct: 277 LSDVEAYIKFYANIRCNQLGYERPFEGYRTNPLRWIVAYEQVDHGK-SDFFEQKSRQYTK 335 >gi|163781846|ref|ZP_02176846.1| ribonucleotide reductase beta chain [Hydrogenivirga sp. 128-5-R1-1] gi|159883066|gb|EDP76570.1| ribonucleotide reductase beta chain [Hydrogenivirga sp. 128-5-R1-1] Length = 350 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++I ++ E P L++ E ++ A EI + +G+N Sbjct: 226 RDELTHVTLFRNMILNLQKEQPELFSPEIKKWIAEYFRYAIDQEIKWGQYVTQDQILGIN 285 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 ++Y++++ N R QIGLEPL+ + TENP W+ + + K +FF+ + Y + Sbjct: 286 NQLIDRYIKYLGNLRITQIGLEPLYPEITENPMKWIDDFRKINNTKTDFFQRKPQTYAKA 345 Query: 120 AELKW 124 ELKW Sbjct: 346 NELKW 350 >gi|283768723|ref|ZP_06341634.1| ribonucleoside-diphosphate reductase, beta subunit [Bulleidia extructa W1219] gi|283104509|gb|EFC05882.1| ribonucleoside-diphosphate reductase, beta subunit [Bulleidia extructa W1219] Length = 348 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +++ +++ E P L+T Q + M+HE EIA+ + GLN Sbjct: 220 RDENTHLWLFRNILLELQKEEPELFTDSNIQMIKDMIHEGVQQEIAWGQYVIGNNIPGLN 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 + E Y++++ N R +GL L++ Y E P W+ + D K +FFE RVT Y Sbjct: 280 SQMVEDYIKYLGNTRFATLGLGNLYEGYEEEPETMRWVKQYSDANMVKTDFFEARVTAYA 339 Query: 118 QGAELKWD 125 + + ++ D Sbjct: 340 KSSAIEDD 347 >gi|254293199|ref|YP_003059222.1| ribonucleotide-diphosphate reductase subunit beta [Hirschia baltica ATCC 49814] gi|254041730|gb|ACT58525.1| Ribonucleoside-diphosphate reductase [Hirschia baltica ATCC 49814] Length = 345 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 2/121 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDESLH + + + E L TK + LE + G V G Sbjct: 198 VRDESLHCEGMMKMFHTYAEETGAL-TKTVKDDITDCCQTVVKLEDKFIDLAFEAGEVEG 256 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + + Y+++IA+ R Q+ L+P++ E+P PW++E+++ + NFFE R TEY +G Sbjct: 257 MTPEDIKNYIRYIADWRLKQLKLDPVYGVDEHPIPWLTEILNGVEHANFFEARATEYSKG 316 Query: 120 A 120 A Sbjct: 317 A 317 >gi|326437649|gb|EGD83219.1| ribonucleotide reductase M2 B [Salpingoeca sp. ATCC 50818] Length = 408 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 67/119 (56%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + + + P +++ ++ +A +E + E +P +G+N Sbjct: 280 RDEGLHCDFACLMFSMLHKKPP-------KERVIGIIMDAVEIEQEFLTEALPVSLLGMN 332 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + +Y++F+++R +G + ++ T NPFP+M E I ++ + NFFE RV+EYQ+ Sbjct: 333 STLMREYIEFVSDRLLVSLGYDKVYNAT-NPFPFM-ENISIEGKTNFFERRVSEYQKSG 389 >gi|266623614|ref|ZP_06116549.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium hathewayi DSM 13479] gi|288864591|gb|EFC96889.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium hathewayi DSM 13479] Length = 346 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L+T + R M+ E EIA+ H + GL Sbjct: 219 RDENTHLWLFRNMILELKNEEPELFTPDRVDVYREMIKEGCRQEIAWGHYAIGDKVPGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y+Q++ N RC +G EP+++ E W+S+ + K +FFE R T Y Sbjct: 279 KDMITDYIQYLGNLRCMSLGFEPIYEGHEKEPESMAWVSQYSNANMIKTDFFEARSTAYA 338 Query: 118 QGAEL 122 + + L Sbjct: 339 KSSAL 343 >gi|190896518|gb|ACE96772.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ Y NPF M E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVY-YVANPFDGM-ELISLQGKTNFFEKRVGEY 223 >gi|132628|sp|P20493|RIR2_VACCC RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|335366|gb|AAA48018.1| putative F4L [Vaccinia virus Copenhagen] Length = 319 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302 >gi|284039889|ref|YP_003389819.1| ribonucleoside-diphosphate reductase [Spirosoma linguale DSM 74] gi|283819182|gb|ADB41020.1| Ribonucleoside-diphosphate reductase [Spirosoma linguale DSM 74] Length = 349 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 8/118 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K + + ++ A +E + + +P +G+N Sbjct: 200 RDEGLHRDFAC------MLYTDHIVNKLPESQIYDIIRNAVEIEQEFVADALPVSLIGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 A +QY+ F+A+ +GL ++ NPF +M ++I L+ + NFFE RV EYQ+G Sbjct: 254 AELMKQYIAFVADHLLVTLGLRKMYN-VANPFDFM-DMISLQGKTNFFEKRVGEYQRG 309 >gi|44971395|gb|AAS49745.1| RPXV032 [Rabbitpox virus] Length = 319 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302 >gi|313115920|ref|ZP_07801347.1| ribonucleoside-diphosphate reductase, beta subunit [Faecalibacterium cf. prausnitzii KLE1255] gi|310621684|gb|EFQ05212.1| ribonucleoside-diphosphate reductase, beta subunit [Faecalibacterium cf. prausnitzii KLE1255] Length = 347 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I +++ E P L+T E Q R M+ E EIA+ H + GLN Sbjct: 219 RDENTHLWLFRNIITELQKEQPELFTAESVQALREMMREGVEQEIAWGHYVIGDDIPGLN 278 Query: 62 APSCEQYMQFIANRRCHQIG---LEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y++++ N R +G L P F+ W+S+ D K +FFE R T Y Sbjct: 279 RQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVKTDFFEARSTAYA 338 Query: 118 QGAEL 122 + L Sbjct: 339 KSTAL 343 >gi|190896526|gb|ACE96776.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ Y NPF M E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVY-YVANPFDGM-ELISLQGKTNFFEKRVGEY 223 >gi|111184227|gb|ABH08147.1| HSPV044 [Horsepox virus] Length = 319 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302 >gi|305665630|ref|YP_003861917.1| putative ribonucleoside-diphosphate reductase small chain [Maribacter sp. HTCC2170] gi|88710386|gb|EAR02618.1| probable ribonucleoside-diphosphate reductase small chain [Maribacter sp. HTCC2170] Length = 328 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 69/124 (55%), Gaps = 8/124 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H ++ + + H+ K +++ ++ +A +E + E++P +G+N Sbjct: 199 RDEGMHCDYAV------HLHKNHIVNKVTKERITDIIVDALNIEREFITESLPVSLIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+ +R ++ + ++ + NPF +M ++I L+ + NFFE RV+EYQ+ Sbjct: 253 SKLMTQYLEFVTDRLLVELECDKVYN-SSNPFDFM-DMISLQGKTNFFEKRVSEYQKAGV 310 Query: 122 LKWD 125 L D Sbjct: 311 LNKD 314 >gi|295103295|emb|CBL00839.1| Ribonucleotide reductase, beta subunit [Faecalibacterium prausnitzii SL3/3] Length = 347 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I +++ E P L+T E Q R M+ E EIA+ H + GLN Sbjct: 219 RDENTHLWLFRNIITELQKEQPELFTAESVQALREMMREGVEQEIAWGHYVIGDDIPGLN 278 Query: 62 APSCEQYMQFIANRRCHQIG---LEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y++++ N R +G L P F+ W+S+ D K +FFE R T Y Sbjct: 279 RQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVKTDFFEARSTAYA 338 Query: 118 QGAEL 122 + L Sbjct: 339 KSTAL 343 >gi|160942848|ref|ZP_02090088.1| hypothetical protein FAEPRAM212_00325 [Faecalibacterium prausnitzii M21/2] gi|158445900|gb|EDP22903.1| hypothetical protein FAEPRAM212_00325 [Faecalibacterium prausnitzii M21/2] Length = 347 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I +++ E P L+T E Q R M+ E EIA+ H + GLN Sbjct: 219 RDENTHLWLFRNIITELQKEQPELFTAESVQALREMMREGVEQEIAWGHYVIGDDIPGLN 278 Query: 62 APSCEQYMQFIANRRCHQIG---LEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y++++ N R +G L P F+ W+S+ D K +FFE R T Y Sbjct: 279 RQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVKTDFFEARSTAYA 338 Query: 118 QGAEL 122 + L Sbjct: 339 KSTAL 343 >gi|22164633|ref|NP_671546.1| EVM028 [Ectromelia virus] gi|22123774|gb|AAM92332.1|AF523264_28 EVM028 [Ectromelia virus] Length = 319 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + Y++FIA+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFIADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302 >gi|330837704|ref|YP_004412345.1| ribonucleotide reductase [Spirochaeta coccoides DSM 17374] gi|329749607|gb|AEC02963.1| ribonucleotide reductase [Spirochaeta coccoides DSM 17374] Length = 360 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++ +++ E P ++T + R M+ + EIA+ H + VGLN Sbjct: 232 RDETTHLWLFRSILREMQKEEPAMFTPNLVDEYRAMIKQGADQEIAWGHYVIGDDIVGLN 291 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y+Q++ N RC +G +P+++ + + P W+ + + K +FFE R T Y Sbjct: 292 KDMVTDYIQYLGNLRCTDLGFQPIYEGHDKEPETMKWVGQYSNANLIKTDFFEARNTAYA 351 Query: 118 QGAEL 122 + L Sbjct: 352 KSTSL 356 >gi|56419447|ref|YP_146765.1| ribonucleoside-diphosphate reductase subunit beta [Geobacillus kaustophilus HTA426] gi|56379289|dbj|BAD75197.1| ribonucleoside-diphosphate reductase beta subunit [Geobacillus kaustophilus HTA426] Length = 346 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H++ + ++ E P T E R +A LEI +A E + G++ Sbjct: 218 RDEHIHVDLFAKIFKEVLNEYPEYRTPELADFVRNTFMKAAELEIEWAREIIGNDIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEKNFFETRVTEYQQ 118 E Y++F AN R HQ+G + P Y NP W+ E +DL K +FFE + +Y + Sbjct: 278 LADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGK-SDFFEQKPRQYTK 336 >gi|50545856|ref|XP_500466.1| YALI0B03630p [Yarrowia lipolytica] gi|49646332|emb|CAG82692.1| YALI0B03630p [Yarrowia lipolytica] Length = 403 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ ++ EA +E + + +P G +G+N Sbjct: 272 RDEGLHTDFACLLFS-------HLENRPSKKIVEDVIVEAVGIEQEFLTDALPCGLLGMN 324 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G ++ T NPF +M E I L + NFFE RV++YQ+ Sbjct: 325 AKLMCQYIEFVADRLLVALGNSKVYNST-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 381 >gi|262263187|dbj|BAI48096.1| ribonucleotide reductase M2 [Sus scrofa] Length = 355 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 9/116 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N Sbjct: 247 RDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMN 299 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV E + Sbjct: 300 CTLMKQYIEFVADRLMLELGFGKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEIR 353 >gi|303278144|ref|XP_003058365.1| predicted protein [Micromonas pusilla CCMP1545] gi|226459525|gb|EEH56820.1| predicted protein [Micromonas pusilla CCMP1545] Length = 338 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +L K R ++ EA +E + + +P VG+N Sbjct: 208 RDEGLHRDFACLLYS-------YLQNKPDVSIVRQIVCEAVEIEKEFVCDALPVSLVGMN 260 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +Y++F+A+ Q+GLE + T NPF +M E+I L+ + NFFE RV EYQ+ Sbjct: 261 KDLMSEYIEFVADHLLGQLGLEKEYN-TVNPFEFM-ELISLQGKTNFFEKRVGEYQKSG 317 >gi|32266105|ref|NP_860137.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter hepaticus ATCC 51449] gi|32262154|gb|AAP77203.1| ribonucleoside diphosphate reductase [Helicobacter hepaticus ATCC 51449] Length = 349 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 63/120 (52%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I+ ++ E HL+T +++ M +A +E + +GL Sbjct: 225 RDEVTHLLLFQNMISSLRKEQGHLFTPSLEEEVVEMFKKAVEIESQWGEYITQGQILGLT 284 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + +Y+Q++A+ R +GL L+ ++NP W+ + +K NFFE +VT Y +G+ Sbjct: 285 SEIIREYIQYLADARLKAVGLPQLYG-SKNPIKWVDQFASFNDQKTNFFEAKVTNYSKGS 343 >gi|291165654|gb|EFE27703.1| ribonucleoside-diphosphate reductase, beta subunit [Filifactor alocis ATCC 35896] Length = 348 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I ++K E P L+T E + R M+ + EI +A+ + GL Sbjct: 220 RDENSHLWLFRSIILELKKEEPELFTPENIEVFRNMIRQGVEEEIKWANYVIGDHIKGLT 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 E Y++++ N RC +G EP+++ Y P W+SE D K +FFE +V+ Y Sbjct: 280 MQMVEDYLKYLGNLRCRGLGFEPIYEGYQREPESMSWVSEYSDPNAIKTDFFEGKVSAYA 339 Query: 118 QGAELKWD 125 + + ++ D Sbjct: 340 KSSVIEDD 347 >gi|149279601|ref|ZP_01885730.1| ribonucleoside-diphosphate reductase 1, beta subunit [Pedobacter sp. BAL39] gi|149229637|gb|EDM35027.1| ribonucleoside-diphosphate reductase 1, beta subunit [Pedobacter sp. BAL39] Length = 324 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F + + +K K ++ ++ +A +E + + +P +G+N Sbjct: 197 RDEGSHCEFACLLYSMLK-------NKLSEEHVHGIIRDAVEIEKEFVTDALPVALIGMN 249 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R ++G ++ T NPF +M E+I L+ + NFFE RV +YQ+ Sbjct: 250 AKLMSQYIEFVADRWLQELGYTKIYHAT-NPFDFM-EMISLQGKTNFFEKRVGDYQKSGV 307 Query: 122 L 122 L Sbjct: 308 L 308 >gi|149194868|ref|ZP_01871962.1| ribonucleotide-diphosphate [Caminibacter mediatlanticus TB-2] gi|149135027|gb|EDM23509.1| ribonucleotide-diphosphate [Caminibacter mediatlanticus TB-2] Length = 346 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 3/122 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H ++ +IK E P L+T E + + ML+ A LE + +GL+ Sbjct: 219 RDEVTHTLLFANIFKEIKKEFPDLFTPEVIRNIKDMLYAAYELERDWGFYITNDEILGLS 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118 +++ +++AN+R H +GLE LF +NP W ++K NFFE V Y + Sbjct: 279 KELIDRFTKYLANKRAHAMGLELLFPEIGLKNPISWFDSFSSFNEQKTNFFEGNVVNYSK 338 Query: 119 GA 120 G+ Sbjct: 339 GS 340 >gi|6969682|gb|AAF33894.1| TF4L [Vaccinia virus Tian Tan] Length = 319 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE L +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 195 RDEGLRCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 E Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQQ Sbjct: 248 CEMMETYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQQ 302 >gi|167462363|ref|ZP_02327452.1| ribonucleoside-diphosphate reductase beta subunit [Paenibacillus larvae subsp. larvae BRL-230010] Length = 343 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 64/117 (54%), Gaps = 2/117 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H+ + ++ ENP L +E + R +A LEIA++ + F G+ Sbjct: 215 RDEEIHVRLFTQIFRELIAENPELDNEETHEFVRQTFRKAAELEIAWSEYIIGDRFDGVT 274 Query: 62 APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEY 116 + ++Y++F+AN+R +++G+E P + N W+ + K +FFE+RVT+Y Sbjct: 275 SRDLDKYVRFMANKRVNELGIERPFEGHRRNNLRWIKAYEENDAGKTDFFESRVTQY 331 >gi|56404698|sp|O57175|RIR2_VACCA RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|2772676|gb|AAB96415.1| ribonucleotide reductase, small subunit [Vaccinia virus] gi|47088360|gb|AAT10430.1| ribonucleotide reductase small subunit [Vaccinia virus] gi|160857924|emb|CAM58212.1| ribonucleotide reductase small subunit [Vaccinia virus Ankara] Length = 319 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302 >gi|66275840|ref|YP_232925.1| ribonucleotide reductase small subunit [Vaccinia virus] gi|132629|sp|P11158|RIR2_VACCV RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|335624|gb|AAA48244.1| F4L protein [Vaccinia virus] gi|335809|gb|AAA88680.1| ribonucleotide reductase (EC 1.17.4.1) small subunit [Vaccinia virus] gi|29692149|gb|AAO89322.1| ribonucleotide reductase small subunit [Vaccinia virus WR] Length = 319 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302 >gi|56713400|gb|AAW23440.1| ribonucleoside-diphosphate reductase [Vaccinia virus] gi|56713684|gb|AAW23722.1| ribonucleoside-diphosphate reductase [Vaccinia virus] gi|88854075|gb|ABD52493.1| ribonucleoside-diphosphate reductase subunit [Vaccinia virus] gi|167412519|gb|ABZ79953.1| ribonucleotide reductase small subunit [Vaccinia virus GLV-1h68] Length = 319 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302 >gi|20178418|ref|NP_619839.1| CPXV051 protein [Cowpox virus] gi|20153036|gb|AAM13497.1|AF482758_48 CPXV051 protein [Cowpox virus] Length = 333 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 209 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 262 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 316 >gi|13876672|gb|AAK43560.1| ribonucleoside reductase [lumpy skin disease virus] Length = 321 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +K + +++EA +E + +P +G+N Sbjct: 196 RDEGLHCDFACLIFKHLKYPPSN-------DIITIIINEAVSIEKEFLTNIIPVKLIGMN 248 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++FIA+R ++G + +F T NPF +M E I L+ + NFFE RV+EYQ+ Sbjct: 249 CVLMSQYIEFIADRLLLELGCDKVFMST-NPFDFM-ENISLEGKTNFFEKRVSEYQK 303 >gi|90660281|gb|ABD97395.1| ribonucleotide reductase small subunit [Cowpox virus] Length = 333 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 209 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 262 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 316 >gi|266919|sp|P29883|RIR2_VACCP RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|335710|gb|AAA48294.1| F14 [Vaccinia virus] Length = 319 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302 >gi|149185037|ref|ZP_01863354.1| ribonucleotide reductase beta subunit [Erythrobacter sp. SD-21] gi|148831148|gb|EDL49582.1| ribonucleotide reductase beta subunit [Erythrobacter sp. SD-21] Length = 352 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 2/121 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDESLH I + ++ E L TK ++ + + LE + G V G Sbjct: 189 IRDESLHCEGIIRMFHEFVRERDCL-TKAVKEDIIDICQKTVRLEDNFIDLAFEMGPVSG 247 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + ++Y+++IA+ R Q+ L+P++ ++P PW++ +I+ + NFFE R TEY +G Sbjct: 248 MTPKDIKKYIRYIADWRLGQLNLDPIYMVDDHPLPWLAPLINGVEHANFFEQRATEYSKG 307 Query: 120 A 120 A Sbjct: 308 A 308 >gi|22595713|gb|AAN02745.1| ribonucleotide reductase small subunit [lumpy skin disease virus] Length = 321 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +K + +++EA +E + +P +G+N Sbjct: 196 RDEGLHCDFACLIFKHLKYPPSN-------DIITIIINEAVSIEKEFLTNIIPVKLIGMN 248 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++FIA+R ++G + +F T NPF +M E I L+ + NFFE RV+EYQ+ Sbjct: 249 CVLMSQYIEFIADRLLLELGCDKVFMST-NPFDFM-ENISLEGKTNFFEKRVSEYQK 303 >gi|157164305|ref|YP_001467763.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter concisus 13826] gi|112800348|gb|EAT97692.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter concisus 13826] Length = 340 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+T E + K M +A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFTPETEAKIYDMFEKAGNLEIKWGKYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 EQY+ ++ ++R IGL+ + +P W+ + +K NFFE +VT Y +G+ Sbjct: 276 DDIIEQYIHYLIDQRLVAIGLKRKYN-VAHPIKWVDDFAKFNDQKSNFFEAKVTNYSKGS 334 >gi|46446983|ref|YP_008348.1| ribonucleoside-diphosphate reductase small chain [Candidatus Protochlamydia amoebophila UWE25] gi|46400624|emb|CAF24073.1| probable ribonucleoside-diphosphate reductase small chain [Candidatus Protochlamydia amoebophila UWE25] Length = 323 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +Q+ + P + + ++ A +E + + +P +G+N Sbjct: 198 RDEGLHCDFACLLYSQLNNKLP-------LETLQAIISHAVAIEKEFVQDALPVRLIGMN 250 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G L+ +NPF +M ++I + + NFFE RV+EYQ+ Sbjct: 251 ATLMCQYIEFVADRLLVALGSPKLYN-VDNPFDFM-DLISMPGKTNFFERRVSEYQKSG 307 >gi|109947017|ref|YP_664245.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter acinonychis str. Sheeba] gi|109714238|emb|CAJ99246.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter acinonychis str. Sheeba] Length = 341 Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E ++ +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLIDEVIEMFKKAVKIEASWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ +++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKIYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 >gi|313768143|ref|YP_004061574.1| hypothetical protein BpV1_144c [Bathycoccus sp. RCC1105 virus BpV1] gi|312599750|gb|ADQ91771.1| hypothetical protein BpV1_144c [Bathycoccus sp. RCC1105 virus BpV1] Length = 387 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 9/120 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H F +++ N +K K Q ++ +A +E + + +P +G+N Sbjct: 266 RDEGMHQEFAVELFNMLK-------NKPSQNTIEEIIRDAVSIEKEFITDALPCSLIGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +Y++++A+R Q+G ++ T+NPF +M E I L + NFFE RV +Y + E Sbjct: 319 SGKMSEYIEYVADRLSKQVGHNKIWN-TKNPFDFM-ENISLDGKTNFFEKRVGDYGKMDE 376 >gi|311748425|ref|ZP_07722210.1| ribonucleoside-diphosphate reductase, beta subunit [Algoriphagus sp. PR1] gi|126576938|gb|EAZ81186.1| ribonucleoside-diphosphate reductase, beta subunit [Algoriphagus sp. PR1] Length = 326 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 68/127 (53%), Gaps = 18/127 (14%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEF-----QQKSRTMLHEATLLEIAYAHETMPKG 56 RDE LH +F HL+TK ++ R ++ +A +E + + +P Sbjct: 196 RDEGLHCDFAC-----------HLYTKHVVNPLPKETVREIIIDAVKIEKEFVTDALPVR 244 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 +G+N+ QY++F+A+R ++ E ++ T NPF +M ++I L+ + NFFE RV +Y Sbjct: 245 LIGMNSDLMCQYIEFVADRLLLELDCEKVWNST-NPFDFM-DMISLQGKTNFFEKRVGDY 302 Query: 117 QQGAELK 123 Q+ +K Sbjct: 303 QKAGVMK 309 >gi|15150459|ref|NP_150454.1| LSDV020 ribonucleotide reductase small subunit [Lumpy skin disease virus NI-2490] gi|15149031|gb|AAK84981.1| LSDV020 ribonucleotide reductase small subunit [Lumpy skin disease virus NI-2490] gi|22595554|gb|AAN02587.1| ribonucleotide reductase small subunit [Lumpy skin disease virus NW-LW] Length = 321 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +K + + +++EA +E + +P +G+N Sbjct: 196 RDEGLHCDFACLIFKHLKYPPSN-------EIITIIINEAVSIEKEFLTNIIPVKLIGMN 248 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++FIA+R ++G + +F T NPF +M E I L+ + NFFE RV+EYQ+ Sbjct: 249 CDLMSQYIEFIADRLLLELGCDKVFMST-NPFDFM-ENISLEGKTNFFEKRVSEYQK 303 >gi|438946|gb|AAA60776.1| homolog of vaccinia virus CDS F4L (ribonucleotide reductase, small chain); putative [Variola major virus] gi|94484491|gb|ABF23604.1| ribonucleotide reductase small subunit [Variola virus] gi|94484688|gb|ABF23800.1| ribonucleotide reductase small subunit [Variola virus] gi|94484886|gb|ABF23997.1| ribonucleotide reductase small subunit [Variola virus] gi|109724274|gb|ABG43399.1| ribonucleotide reductase small subunit [Variola virus] Length = 333 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 209 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 262 CEMMKTYIKFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 316 >gi|885759|gb|AAA69374.1| E4L [Variola virus] gi|5830589|emb|CAB54628.1| E4L protein [Variola minor virus] gi|94483674|gb|ABF22791.1| ribonucleotide reductase small subunit [Variola virus] gi|94484287|gb|ABF23401.1| ribonucleotide reductase small subunit [Variola virus] gi|94485692|gb|ABF24799.1| ribonucleotide reductase small subunit [Variola virus] gi|94486095|gb|ABF25200.1| ribonucleotide reductase small subunit [Variola virus] gi|94486298|gb|ABF25402.1| ribonucleotide reductase small subunit [Variola virus] gi|94486501|gb|ABF25604.1| ribonucleotide reductase small subunit [Variola virus] gi|94486703|gb|ABF25805.1| ribonucleotide reductase small subunit [Variola virus] gi|94486906|gb|ABF26007.1| ribonucleotide reductase small subunit [Variola virus] gi|94487312|gb|ABF26411.1| ribonucleotide reductase small subunit [Variola virus] gi|94487921|gb|ABF27017.1| ribonucleotide reductase small subunit [Variola virus] gi|94489931|gb|ABF29017.1| ribonucleotide reductase small subunit [Variola virus] gi|109724476|gb|ABG43600.1| ribonucleotide reductase small subunit [Variola virus] gi|156635085|gb|ABU91534.1| ribonucleotide reductase small subunit [Variola virus] Length = 319 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302 >gi|312075738|ref|XP_003140550.1| ribonucleotide reductase M2 B [Loa loa] gi|307764288|gb|EFO23522.1| ribonucleotide reductase M2 B [Loa loa] Length = 350 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + IK K +++ ++ EA +E Y E +P +G+N Sbjct: 225 RDEGLHRDFACLLYTYIK-------NKPSEERIYQIIREAVDIEKEYLTEALPVDLIGIN 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++++A+ ++ ++ Y++NPF +M E I ++ + NFFE RV+EYQ+ Sbjct: 278 CKLMCQYIEYVADHLLTELHCAKMY-YSDNPFDFM-ERISIEAKTNFFEKRVSEYQKAGV 335 Query: 122 L 122 L Sbjct: 336 L 336 >gi|304439119|ref|ZP_07399038.1| ribonucleotide-diphosphate reductase beta subunit [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372478|gb|EFM26065.1| ribonucleotide-diphosphate reductase beta subunit [Peptoniphilus duerdenii ATCC BAA-1640] Length = 347 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +K E P L+T+E ++ R +L EIA+ + GL Sbjct: 219 RDENTHLWLFRSIILDLKKEQPELFTEEKVEEYRALLKYGVEEEIAWGKYVIGDDIQGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117 + E Y++++ N R +G EPL++ + W+++ D+ K +FFE +VT Y Sbjct: 279 SKMVEDYIKYLGNLRATNLGFEPLYEGYDKEVESMKWVTQYADINLLKTDFFEAKVTAYS 338 Query: 118 QGAELKWD 125 + A ++ D Sbjct: 339 KSAIIEDD 346 >gi|113195221|ref|YP_717351.1| ribonucleotide reductase small subunit [Taterapox virus] gi|90660497|gb|ABD97610.1| ribonucleotide reductase small subunit [Taterapox virus] Length = 319 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302 >gi|156387375|ref|XP_001634179.1| predicted protein [Nematostella vectensis] gi|156221259|gb|EDO42116.1| predicted protein [Nematostella vectensis] Length = 384 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K ++ R ++ +A ++E + +P +G+N Sbjct: 259 RDEGLHCDFAC-------LMYKYLVNKPDEETVRGIIKDAVVIEQEFLTSALPVKLIGMN 311 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R + + ++ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 312 CALMRQYIEFVADRLLVALNCQKVYN-AENPFDFM-ENISLEGKTNFFEKRVGEYQKSG 368 >gi|885717|gb|AAA69333.1| C8L [Variola virus] gi|885826|gb|AAA69439.1| C8L [Variola virus] gi|94483878|gb|ABF22994.1| ribonucleotide reductase small subunit [Variola virus] gi|94484081|gb|ABF23196.1| ribonucleotide reductase small subunit [Variola virus] gi|94485084|gb|ABF24194.1| ribonucleotide reductase small subunit [Variola virus] gi|94485286|gb|ABF24395.1| ribonucleotide reductase small subunit [Variola virus] gi|94485489|gb|ABF24597.1| ribonucleotide reductase small subunit [Variola virus] gi|94485894|gb|ABF25000.1| ribonucleotide reductase small subunit [Variola virus] gi|94487109|gb|ABF26209.1| ribonucleotide reductase small subunit [Variola virus] gi|94487515|gb|ABF26613.1| ribonucleotide reductase small subunit [Variola virus] gi|94487716|gb|ABF26813.1| ribonucleotide reductase small subunit [Variola virus] gi|94488123|gb|ABF27218.1| ribonucleotide reductase small subunit [Variola virus] gi|94488323|gb|ABF27417.1| ribonucleotide reductase small subunit [Variola virus] gi|94488523|gb|ABF27616.1| ribonucleotide reductase small subunit [Variola virus] gi|94488724|gb|ABF27816.1| ribonucleotide reductase small subunit [Variola virus] gi|94488925|gb|ABF28016.1| ribonucleotide reductase small subunit [Variola virus] gi|94489125|gb|ABF28215.1| ribonucleotide reductase small subunit [Variola virus] gi|94489324|gb|ABF28413.1| ribonucleotide reductase small subunit [Variola virus] gi|94489527|gb|ABF28615.1| ribonucleotide reductase small subunit [Variola virus] gi|94489726|gb|ABF28813.1| ribonucleotide reductase small subunit [Variola virus] gi|94490135|gb|ABF29220.1| ribonucleotide reductase small subunit [Variola virus] gi|109724070|gb|ABG43196.1| ribonucleotide reductase small subunit [Variola virus] gi|109724681|gb|ABG43804.1| ribonucleotide reductase small subunit [Variola virus] gi|109724885|gb|ABG44007.1| ribonucleotide reductase small subunit [Variola virus] gi|109725088|gb|ABG44209.1| ribonucleotide reductase small subunit [Variola virus] gi|109725293|gb|ABG44413.1| ribonucleotide reductase small subunit [Variola virus] gi|109725496|gb|ABG44615.1| ribonucleotide reductase small subunit [Variola virus] gi|109725700|gb|ABG44818.1| ribonucleotide reductase small subunit [Variola virus] gi|109725903|gb|ABG45020.1| ribonucleotide reductase small subunit [Variola virus] gi|109726107|gb|ABG45223.1| ribonucleotide reductase small subunit [Variola virus] gi|109726310|gb|ABG45425.1| ribonucleotide reductase small subunit [Variola virus] gi|109726513|gb|ABG45627.1| ribonucleotide reductase small subunit [Variola virus] gi|156635013|gb|ABU91466.1| ribonucleotide reductase small subunit [Variola virus] gi|156635031|gb|ABU91483.1| ribonucleotide reductase small subunit [Variola virus] gi|156635049|gb|ABU91500.1| ribonucleotide reductase small subunit [Variola virus] gi|156635067|gb|ABU91517.1| ribonucleotide reductase small subunit [Variola virus] gi|156635103|gb|ABU91551.1| ribonucleotide reductase small subunit [Variola virus] gi|156635121|gb|ABU91568.1| ribonucleotide reductase small subunit [Variola virus] gi|156635139|gb|ABU91585.1| ribonucleotide reductase small subunit [Variola virus] gi|156635158|gb|ABU91603.1| ribonucleotide reductase small subunit [Variola virus] gi|156635176|gb|ABU91620.1| ribonucleotide reductase small subunit [Variola virus] gi|156635194|gb|ABU91637.1| ribonucleotide reductase small subunit [Variola virus] gi|156635212|gb|ABU91654.1| ribonucleotide reductase small subunit [Variola virus] gi|156635230|gb|ABU91671.1| ribonucleotide reductase small subunit [Variola virus] gi|156635248|gb|ABU91688.1| ribonucleotide reductase small subunit [Variola virus] gi|156635266|gb|ABU91705.1| ribonucleotide reductase small subunit [Variola virus] gi|156635284|gb|ABU91722.1| ribonucleotide reductase small subunit [Variola virus] gi|156635320|gb|ABU91756.1| ribonucleotide reductase small subunit [Variola virus] gi|156635338|gb|ABU91773.1| ribonucleotide reductase small subunit [Variola virus] gi|156635356|gb|ABU91790.1| ribonucleotide reductase small subunit [Variola virus] gi|156635374|gb|ABU91807.1| ribonucleotide reductase small subunit [Variola virus] gi|156635392|gb|ABU91824.1| ribonucleotide reductase small subunit [Variola virus] gi|157739431|gb|ABU91739.1| ribonucleotide reductase small subunit [Variola virus] Length = 319 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIKFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302 >gi|169860861|ref|XP_001837065.1| ribonucleotide reductase small subunit [Coprinopsis cinerea okayama7#130] gi|116501787|gb|EAU84682.1| ribonucleotide reductase small subunit [Coprinopsis cinerea okayama7#130] Length = 414 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + +K PH + ++ EA +E + + +P +G+N Sbjct: 278 RDEGMHTDFACLLFSHLK-RRPH------PDVVKRIITEAVAIEQEFLTDALPVKLIGMN 330 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G E ++ T NPF +M ++I L+ + NFFE RV++Y + Sbjct: 331 AELMCQYIEFVADRLLVSLGNEKVYNST-NPFDFM-DMISLQGKTNFFEKRVSDYAKAG 387 >gi|154174558|ref|YP_001409201.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter curvus 525.92] gi|112803525|gb|EAU00869.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter curvus 525.92] Length = 340 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T E ++K M +A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRAERSDLFTPEMEEKIYDMFEKAGNLEIKWGRYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 E+Y+ ++ ++R IGL+ + ++P W+ + +K NFFE++VT Y +G+ Sbjct: 276 DDIIEEYIHYLVDQRLVAIGLKRKYN-AKHPIKWVDDFAKFNDQKSNFFESKVTNYSKGS 334 >gi|294501621|ref|YP_003565321.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus megaterium QM B1551] gi|295706969|ref|YP_003600044.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus megaterium DSM 319] gi|294351558|gb|ADE71887.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus megaterium QM B1551] gi|294804628|gb|ADF41694.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus megaterium DSM 319] Length = 347 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH+ + ++ ENP T+E + EA LEI +A + + F G+ Sbjct: 217 RDEQLHVGLFEKIFKEVLNENPAYRTEELETFVVETFQEAARLEIEWAESVIGEKFDGIT 276 Query: 62 APSCEQYMQFIANRRCHQIGL-------EPLFKYTENPFPWM--SEVIDLKKEKNFFETR 112 +QY++++AN+RC+Q+G P+ ENP W+ + +DL K +FFE + Sbjct: 277 MKELQQYIEYMANKRCNQLGFGRAAFPEAPI----ENPLRWIIAYQEVDLGK-TDFFEQK 331 Query: 113 VTEYQQGAE 121 +Y + ++ Sbjct: 332 SRQYTKASD 340 >gi|131840053|ref|YP_001096062.1| ORF23 [Cyprinid herpesvirus 3] gi|84181618|gb|ABC55221.1| hypothetical protein [Cyprinid herpesvirus 3] gi|109706628|gb|ABG42854.1| ORF23 [Cyprinid herpesvirus 3] gi|129560539|dbj|BAF48834.1| ribonucleotide reductase small chain [Cyprinid herpesvirus 3] Length = 335 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 8/116 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL K +++ R ++ EA +E + +++P VG+N Sbjct: 208 RDEGLHRDFACLLFSS------HLRHKPSKERVRAIITEAVEIEKEFLTQSLPVSLVGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 +Y+Q++A+ Q+GL L+ T PF +M E I L+ + NFFE RV +YQ Sbjct: 262 HDLMCKYIQYVADHLLCQMGLSRLYN-TPCPFDFM-ENISLEGKTNFFEKRVADYQ 315 >gi|317014473|gb|ADU81909.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori Gambia94/24] Length = 341 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E ++ +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ +++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKIYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 >gi|302696699|ref|XP_003038028.1| hypothetical protein SCHCODRAFT_12788 [Schizophyllum commune H4-8] gi|300111725|gb|EFJ03126.1| hypothetical protein SCHCODRAFT_12788 [Schizophyllum commune H4-8] Length = 377 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 35/118 (29%), Positives = 64/118 (54%), Gaps = 9/118 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H F + + ++ PH + ++ EA +E + + +P +G+N Sbjct: 257 RDEGMHTEFACLLFSHLR-HRPH------PSVVQRIVKEAVAIEHEFLSDALPVSLIGMN 309 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 A QY++F+A+R + +G ++ T NPF +M ++I L+ + NFFE RV+EY + Sbjct: 310 AALMRQYIEFVADRLLYSLGQNKIYNAT-NPFDFM-DMISLQGKTNFFEKRVSEYAKA 365 >gi|317011285|gb|ADU85032.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori SouthAfrica7] Length = 341 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E ++ +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLIDEVIEMFKKAVEIEASWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ +++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKIYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 >gi|298707394|emb|CBJ30029.1| conserved unknown protein [Ectocarpus siliculosus] Length = 380 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 17/123 (13%) Query: 2 RDESLHLNFGI----DVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 57 RDE LH +F ++N++ +E + ++ +A +E + +P Sbjct: 255 RDEGLHTDFACLLFRKLVNKLPVE-----------RVAEIICDAVDIEKEFITSALPVEL 303 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 +G+N+ QY++F A+R ++G E + T NPF WM E+I L+ + NFFE RV EY Sbjct: 304 IGMNSALMRQYIEFCADRLLMELGCEKKYNST-NPFDWM-EMISLQGKTNFFEKRVGEYS 361 Query: 118 QGA 120 + Sbjct: 362 KSG 364 >gi|58260896|ref|XP_567858.1| ribonucleoside-diphosphate reductase [Cryptococcus neoformans var. neoformans JEC21] gi|134116993|ref|XP_772723.1| hypothetical protein CNBK0970 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255341|gb|EAL18076.1| hypothetical protein CNBK0970 [Cryptococcus neoformans var. neoformans B-3501A] gi|57229939|gb|AAW46341.1| ribonucleoside-diphosphate reductase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 401 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++ PH ++ EA +E + + +P +G+N Sbjct: 269 RDEGLHTDFACLLFTHLR-RRPH------PDTIARIIKEAVTIEQEFLTDALPVSLIGMN 321 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G E ++ T NPF +M E+I L+ + NFFE+RV+ Y + Sbjct: 322 AKLMCQYIEFVADRLLVAMGNEKIWNST-NPFDFM-EMISLQGKANFFESRVSAYSKSG 378 >gi|188527870|ref|YP_001910557.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori Shi470] gi|188144110|gb|ACD48527.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori Shi470] gi|308063873|gb|ADO05760.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori Sat464] Length = 341 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E ++ +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ +++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 >gi|8101697|gb|AAF72618.1|AF252539_2 ribonucleotide reductase small subunit M2 [Leishmania amazonensis] Length = 345 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N Sbjct: 218 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 271 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G E ++ T+ PF +M E+I L+ + NFFE RV EYQ+ Sbjct: 272 AELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFFEKRVGEYQKAG 328 >gi|257453171|ref|ZP_05618470.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp. 3_1_5R] gi|317059706|ref|ZP_07924191.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium sp. 3_1_5R] gi|313685382|gb|EFS22217.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium sp. 3_1_5R] Length = 344 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 9/130 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I +IK ENP+ + +E + R M A EI + + +G+ Sbjct: 216 RDELSHVVLFQKIIREIKAENPNFFQEE---EIRMMFQTAVEQEILWTEHIIGNRVLGIT 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116 + E Y +++AN R IGL P++ +T+NP+ + D + + NFFE VT Y Sbjct: 273 TETTEAYTKWLANERLRTIGLAPMYDGFTKNPYKHLERFADTEGDGNVKSNFFEGTVTSY 332 Query: 117 QQGAELK-WD 125 + + WD Sbjct: 333 NMSSSIDGWD 342 >gi|73544537|ref|XP_848163.1| ribonucleoside-diphosphate reductase small chain [Leishmania major strain Friedlin] gi|321438516|emb|CBZ12275.1| putative ribonucleoside-diphosphate reductase small chain [Leishmania major strain Friedlin] Length = 388 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N Sbjct: 261 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 314 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G E ++ T+ PF +M E+I L+ + NFFE RV EYQ+ Sbjct: 315 AELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFFEKRVGEYQKAG 371 >gi|317178607|dbj|BAJ56395.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori F30] Length = 341 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E ++ +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ +++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 >gi|308183194|ref|YP_003927321.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori PeCan4] gi|308065379|gb|ADO07271.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori PeCan4] Length = 341 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E ++ +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ +++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 >gi|261838422|gb|ACX98188.1| ribonucleoside-diphosphate reductase 1 beta subunit [Helicobacter pylori 51] Length = 341 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E ++ +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ +++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 >gi|156387377|ref|XP_001634180.1| predicted protein [Nematostella vectensis] gi|156221260|gb|EDO42117.1| predicted protein [Nematostella vectensis] Length = 341 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K ++ R ++ +A ++E + +P +G+N Sbjct: 216 RDEGLHCDFAC-------LMYKYLVNKPDEETVRGIIKDAVVIEQEFLTSALPVKLIGMN 268 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R + + ++ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 269 CALMRQYIEFVADRLLVALNCQKVYN-VENPFDFM-ENISLEGKTNFFEKRVGEYQKSG 325 >gi|3914644|sp|O46310|RIR2_LEIAM RecName: Full=Ribonucleoside-diphosphate reductase small subunit; AltName: Full=Ribonucleotide reductase M2 subunit; AltName: Full=Ribonucleotide reductase small subunit gi|2828563|gb|AAC08302.1| ribonucleotide reductase M2 subunit [Leishmania amazonensis] Length = 345 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N Sbjct: 218 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 271 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G E ++ T+ PF +M E+I L+ + NFFE RV EYQ+ Sbjct: 272 AELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFFEKRVGEYQKAG 328 >gi|321263777|ref|XP_003196606.1| ribonucleoside-diphosphate reductase [Cryptococcus gattii WM276] gi|317463083|gb|ADV24819.1| Ribonucleoside-diphosphate reductase, putative [Cryptococcus gattii WM276] Length = 401 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++ PH ++ EA +E + + +P +G+N Sbjct: 269 RDEGLHTDFACLLFTHLR-RRPH------PDTIARIIKEAVSIEQEFLTDALPVSLIGMN 321 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G E ++ T NPF +M E+I L+ + NFFE+RV+ Y + Sbjct: 322 AKLMCQYIEFVADRLLVALGNEKIWNST-NPFDFM-EMISLQGKANFFESRVSAYSKSG 378 >gi|297380266|gb|ADI35153.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori v225d] gi|308062365|gb|ADO04253.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori Cuz20] gi|317180823|dbj|BAJ58609.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori F32] gi|332673890|gb|AEE70707.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter pylori 83] Length = 341 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E ++ +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ +++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 >gi|257467364|ref|ZP_05631675.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium gonidiaformans ATCC 25563] gi|315918494|ref|ZP_07914734.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium gonidiaformans ATCC 25563] gi|313692369|gb|EFS29204.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium gonidiaformans ATCC 25563] Length = 344 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 9/130 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I +IK ENP+ + +E + R M A EI + + +G+ Sbjct: 216 RDELSHVVLFQKIIREIKAENPNFFQEE---EIRMMFQTAVEQEILWTEHIIGNRVLGIT 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116 + E Y +++AN R IGL P++ +T+NP+ + D + + NFFE VT Y Sbjct: 273 TETTEAYTKWLANERLRTIGLAPMYDGFTKNPYKHLERFADTEGDGNVKSNFFEGTVTSY 332 Query: 117 QQGAELK-WD 125 + + WD Sbjct: 333 NMSSSIDGWD 342 >gi|210135249|ref|YP_002301688.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori P12] gi|210133217|gb|ACJ08208.1| ribonucleoside-diphosphate reductase 1 beta subunit [Helicobacter pylori P12] Length = 341 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E ++ +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ +++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 >gi|109287926|ref|YP_654620.1| hypothetical protein MIV048L [Invertebrate iridescent virus 3] gi|123878658|sp|Q197B2|RIR2_IIV3 RecName: Full=Probable ribonucleoside-diphosphate reductase small subunit 048L; AltName: Full=Ribonucleotide reductase small subunit gi|106073549|gb|ABF82078.1| hypothetical protein MIV048L [Aedes taeniorhynchus iridescent virus] Length = 376 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 2/122 (1%) Query: 1 MRDESLHLNFGIDVINQIKIEN-PHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FV 58 + DE+ H N +++ + + +EN H+ + + R + LE + G Sbjct: 248 IADETHHTNSMMELFSTLVVENKSHIRLGVLEARVRDTARKIVQLEDGFIDLAFSMGEMR 307 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 L A + Y+++I NRR +G PL+ ENP PW+ ++++ NFFE + TEY + Sbjct: 308 QLTADDVKSYIRYITNRRLQTMGYLPLYSVVENPLPWVEDLLNAPSHTNFFENKPTEYAK 367 Query: 119 GA 120 + Sbjct: 368 AS 369 >gi|269963257|ref|ZP_06177590.1| hypothetical protein VME_39740 [Vibrio harveyi 1DA3] gi|269832005|gb|EEZ86131.1| hypothetical protein VME_39740 [Vibrio harveyi 1DA3] Length = 310 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 16/129 (12%) Query: 2 RDESLHLNFG---IDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58 RDE LH +F + Q K+ QQ+ + EA +E + E +P + Sbjct: 190 RDEGLHFSFSALLFKTLGQGKVT---------QQEFEEICREAVSIEKEFVTEALPVDLI 240 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ- 117 G+NA QY++ A+ G P+F ENPF +M ++D++ + NFFE RVTEY+ Sbjct: 241 GMNAELMCQYIEHTADVIAGLFGFTPIFG-AENPFDYM-RLLDMEGKTNFFEKRVTEYKR 298 Query: 118 -QGAELKWD 125 Q +L +D Sbjct: 299 PQDRQLSFD 307 >gi|194755279|ref|XP_001959919.1| GF11796 [Drosophila ananassae] gi|190621217|gb|EDV36741.1| GF11796 [Drosophila ananassae] Length = 393 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 66/117 (56%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL K +++ ++ +A +E + + +P +G+N Sbjct: 268 RDEGLHCDFAVLMFQ-------HLVQKPRRERIIEIIRDAVDIEQEFLTDALPVNLIGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+R ++G+ ++ T+NPF +M E+I L + NFFE +V EYQ+ Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVGEYQR 375 >gi|326797773|ref|YP_004315592.1| ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21] gi|326548537|gb|ADZ76922.1| Ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21] Length = 323 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 67/119 (56%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH F + + ++ + P +++ + ++ +A +E + + +P +G+N Sbjct: 198 RDEGLHCEFACLLYSMLEAKLP-------KERVQEIIIDAVEIEKEFITDALPVKLIGMN 250 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A +QY++F+A+R ++G + T NPF +M E+I L+ + NFFE RV +YQ+ Sbjct: 251 ADLMKQYIEFVADRWLVELGNSKYYNAT-NPFDFM-ELISLQGKTNFFEKRVGDYQKSG 307 >gi|297530897|ref|YP_003672172.1| ribonucleotide reductase [Geobacillus sp. C56-T3] gi|297254149|gb|ADI27595.1| ribonucleotide reductase [Geobacillus sp. C56-T3] Length = 346 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H++ + ++ E P T E R +A LEI +A E + G++ Sbjct: 218 RDEHIHVDLFAKIFKEVLNEYPEYRTPELSDFVRETFTKAAELEIEWAGEIIGNDIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEKNFFETRVTEYQQ 118 E Y++F AN R HQ+G + P Y NP W+ E +DL K +FFE + +Y + Sbjct: 278 LADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGK-SDFFEQKPRQYTK 336 >gi|323453718|gb|EGB09589.1| hypothetical protein AURANDRAFT_60022 [Aureococcus anophagefferens] Length = 393 Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 7/118 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +++ HL + ++ ++ EA E+ + + +P VG+N Sbjct: 265 RDEGLHCDFACALYSRLP---GHLRLSD--AEATAIISEAVDTEVDFVTDALPVSLVGMN 319 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 A Y++F+A+R +G P NPF +M E+I ++ + NFFE RV EYQ+ Sbjct: 320 AKLMTDYVKFVADRLLASLG-HPKIYGAANPFDFM-ELISMQGKTNFFEKRVAEYQKA 375 >gi|261419130|ref|YP_003252812.1| ribonucleoside-diphosphate reductase [Geobacillus sp. Y412MC61] gi|319765947|ref|YP_004131448.1| ribonucleotide reductase [Geobacillus sp. Y412MC52] gi|261375587|gb|ACX78330.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. Y412MC61] gi|317110813|gb|ADU93305.1| ribonucleotide reductase [Geobacillus sp. Y412MC52] Length = 346 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H++ + ++ E P T E R +A LEI +A E + G++ Sbjct: 218 RDEHIHVDLFAKIFKEVLNEYPEYRTPELSDFVRETFTKAAELEIEWAGEIIGNDIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEKNFFETRVTEYQQ 118 E Y++F AN R HQ+G + P Y NP W+ E +DL K +FFE + +Y + Sbjct: 278 LADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGK-SDFFEQKPRQYTK 336 >gi|155370982|ref|YP_001426516.1| hypothetical protein ATCV1_Z035L [Acanthocystis turfacea Chlorella virus 1] gi|155124302|gb|ABT16169.1| hypothetical protein ATCV1_Z035L [Acanthocystis turfacea Chlorella virus 1] Length = 325 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 9/124 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH FG + + K+EN K ++++ EA E + + +P +G+N Sbjct: 201 RDEGLHQQFGELLYS--KLEN-----KLSLDVVKSIVEEAVANEKDFICDAIPCRMIGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G F ENPF +M E+I L+ + NFFE RV+EYQ+ Sbjct: 254 SDLMSQYIEFVADRIFTALGYPKQFG-AENPFDFM-ELISLEGKSNFFERRVSEYQKAGV 311 Query: 122 LKWD 125 + D Sbjct: 312 MNAD 315 >gi|255711354|ref|XP_002551960.1| KLTH0B03938p [Lachancea thermotolerans] gi|238933338|emb|CAR21522.1| KLTH0B03938p [Lachancea thermotolerans] Length = 403 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++ EA +E Y + +P +G+N Sbjct: 273 RDEGLHTDFACLLF-------AHLKNKPDPAIIERIITEAVEIEQRYFRDALPVSLLGMN 325 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G + + T NPF +M E I L + NFFE RV++YQ+ Sbjct: 326 ADLMNQYVEFVADRLLVALGNQKFYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 382 >gi|84998662|ref|XP_954052.1| ribonucleotide reductase R2 subunit or ribonucleoside-diphosphate reductase small chain [Theileria annulata] gi|65305050|emb|CAI73375.1| ribonucleotide reductase R2 subunit or ribonucleoside-diphosphate reductase small chain, putative [Theileria annulata] Length = 322 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 56/95 (58%), Gaps = 8/95 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +FG + + +K + P ++ + ++ EA ++E +Y +++P +G+N Sbjct: 224 RDEGLHADFGCFIYHNLKHKLP-------EEAVQQIIKEAVVVERSYICDSLPCDLIGMN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96 + QY++F+A+R +G+ P++ T NPF WM Sbjct: 277 SQLMTQYIEFVADRLLQSLGVRPVYNVT-NPFDWM 310 >gi|124010268|ref|ZP_01694921.1| ribonucleoside-diphosphate reductase, beta subunit [Microscilla marina ATCC 23134] gi|123983653|gb|EAY24093.1| ribonucleoside-diphosphate reductase, beta subunit [Microscilla marina ATCC 23134] Length = 330 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N ++ K + +++ A +E + + +P +G+N Sbjct: 200 RDEGLHCDFAC------LLYNSYIKNKLPNETVVSIIKNAVEIEKEFVTDALPVKLIGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + +Y++F+A+R ++G E + T NPF +M E+I L+ + NFFE RV+EY + Sbjct: 254 SDLMSEYIEFVADRLLVELGCEKQYN-TANPFDFM-EMISLEGKTNFFEKRVSEYSKAG 310 >gi|323308423|gb|EGA61668.1| Rnr2p [Saccharomyces cerevisiae FostersO] Length = 399 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++ EA +E Y + +P +G+N Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R G + +K ENPF +M E I L + NFFE RV++YQ+ Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380 >gi|254779643|ref|YP_003057749.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori B38] gi|254001555|emb|CAX29573.1| Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide reductase small subunit) [Helicobacter pylori B38] Length = 341 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E ++ +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ +++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 >gi|207343947|gb|EDZ71248.1| YJL026Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 399 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++ EA +E Y + +P +G+N Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R G + +K ENPF +M E I L + NFFE RV++YQ+ Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380 >gi|15612081|ref|NP_223733.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori J99] gi|11387046|sp|Q9ZKC3|RIR2_HELPJ RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit gi|4155613|gb|AAD06604.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 BETA CHAIN [Helicobacter pylori J99] gi|307637755|gb|ADN80205.1| Ribonucleotide reductase of classIa beta subunit [Helicobacter pylori 908] gi|325996356|gb|ADZ51761.1| Ribonucleotide reductase of class Ia beta subunit [Helicobacter pylori 2018] gi|325997944|gb|ADZ50152.1| Ribonucleosidase diphosphate reductase beta subunit [Helicobacter pylori 2017] Length = 341 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E ++ +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ +++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 >gi|315586979|gb|ADU41360.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter pylori 35A] Length = 341 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E ++ +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ +++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 >gi|290771185|emb|CAY80753.2| Rnr2p [Saccharomyces cerevisiae EC1118] Length = 399 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 11/120 (9%) Query: 2 RDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 RDE LH +F + +K + +P + K ++ EA +E Y + +P +G+ Sbjct: 271 RDEGLHTDFACLLFAHLKNKPDPAIVEK--------IVTEAVEIEQRYFLDALPVALLGM 322 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA QY++F+A+R G + +K ENPF +M E I L + NFFE RV++YQ+ Sbjct: 323 NADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380 >gi|151945057|gb|EDN63308.1| ribonucleotide reductase subunit [Saccharomyces cerevisiae YJM789] gi|190409471|gb|EDV12736.1| ribonucleotide reductase subunit [Saccharomyces cerevisiae RM11-1a] gi|256271075|gb|EEU06176.1| Rnr2p [Saccharomyces cerevisiae JAY291] Length = 399 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++ EA +E Y + +P +G+N Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R G + +K ENPF +M E I L + NFFE RV++YQ+ Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380 >gi|323347997|gb|EGA82256.1| Rnr2p [Saccharomyces cerevisiae Lalvin QA23] Length = 399 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 11/120 (9%) Query: 2 RDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 RDE LH +F + +K + +P + K ++ EA +E Y + +P +G+ Sbjct: 271 RDEGLHTDFACLLFAHLKNKPDPAIVEK--------IVTEAVEIEQRYFLDALPVALLGM 322 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA QY++F+A+R G + +K ENPF +M E I L + NFFE RV++YQ+ Sbjct: 323 NADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380 >gi|324509007|gb|ADY43795.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum] Length = 337 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + IK K Q++ ++ EA LE Y E +P +G+N Sbjct: 212 RDEGLHRDFACLLYKYIK-------HKPSQEQVYEIIKEAVSLEQEYLTEALPVDLIGMN 264 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++++A+ ++G ++ NPF +M E + ++ + NFFE RV+EYQ+ Sbjct: 265 CRLMSQYIEYVADHLLTELGYPKVYN-ASNPFDFM-ENLSIEAKTNFFERRVSEYQRAGV 322 Query: 122 L 122 L Sbjct: 323 L 323 >gi|6322434|ref|NP_012508.1| Rnr2p [Saccharomyces cerevisiae S288c] gi|1172946|sp|P09938|RIR2_YEAST RecName: Full=Ribonucleoside-diphosphate reductase small chain 1; AltName: Full=Ribonucleotide reductase R2 subunit 1; AltName: Full=Ribonucleotide reductase small subunit 1 gi|52695523|pdb|1SMQ|A Chain A, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer From Saccharomyces Cerevisiae gi|52695524|pdb|1SMQ|B Chain B, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer From Saccharomyces Cerevisiae gi|52695525|pdb|1SMQ|C Chain C, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer From Saccharomyces Cerevisiae gi|52695526|pdb|1SMQ|D Chain D, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer From Saccharomyces Cerevisiae gi|172450|gb|AAA34988.1| ribonucleoside diphosphate reductase small subunit [Saccharomyces cerevisiae] gi|1008142|emb|CAA89317.1| RNR2 [Saccharomyces cerevisiae] gi|285812874|tpg|DAA08772.1| TPA: Rnr2p [Saccharomyces cerevisiae S288c] Length = 399 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++ EA +E Y + +P +G+N Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R G + +K ENPF +M E I L + NFFE RV++YQ+ Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380 >gi|312599293|gb|ADQ91316.1| hypothetical protein BpV2_149c [Bathycoccus sp. RCC1105 virus BpV2] Length = 387 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 65/120 (54%), Gaps = 9/120 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H F +++ N +K K + ++ +A +E + + +P +G+N Sbjct: 266 RDEGMHQEFAVELFNMLK-------NKPSGEIIEEIIRDAVTIEKEFITDALPCSLIGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +Y++++A+R Q+G + ++ T+NPF +M E I L + NFFE RV +Y + E Sbjct: 319 SSKMSEYIEYVADRLSKQVGHDKIWN-TKNPFDFM-ENISLDGKTNFFEKRVGDYGKMDE 376 >gi|172448|gb|AAA34987.1| ribonucleotide reductase subunit 2 (RNR2) [Saccharomyces cerevisiae] Length = 399 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++ EA +E Y + +P +G+N Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R G + +K ENPF +M E I L + NFFE RV++YQ+ Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380 >gi|149248382|ref|XP_001528578.1| ribonucleoside-diphosphate reductase small chain [Lodderomyces elongisporus NRRL YB-4239] gi|146448532|gb|EDK42920.1| ribonucleoside-diphosphate reductase small chain [Lodderomyces elongisporus NRRL YB-4239] Length = 422 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + + ++ EA +E + + +P +G+N Sbjct: 294 RDEGLHTDFACLLFS-------HLENRPDPKIVEKIISEAVEIEKEFFTDALPVSLLGMN 346 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R +G E ++K T NPF +M E I L + NFFE RV++YQ+ Sbjct: 347 CKLMCQYVEFVADRLLVALGNEKIYKVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 403 >gi|307110551|gb|EFN58787.1| hypothetical protein CHLNCDRAFT_34102 [Chlorella variabilis] Length = 335 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ + +++ ++ +A +E + + +P +G+N Sbjct: 207 RDEGLHTDFACLLYR-------HIHNRLSEERVAEIVTQAVEIEKEFICDALPVDLIGMN 259 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G P NPF WM E+I L+ + NFFE RV +YQ+ Sbjct: 260 SRLMGQYIEFVADRLLVALG-NPKVYNVSNPFDWM-ELISLQGKTNFFEKRVGDYQKAG 316 >gi|15826569|pdb|1JK0|A Chain A, Ribonucleotide Reductase Y2y4 Heterodimer Length = 419 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++ EA +E Y + +P +G+N Sbjct: 291 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 343 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R G + +K ENPF +M E I L + NFFE RV++YQ+ Sbjct: 344 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAG 400 >gi|150863757|ref|XP_001382334.2| small subunit of ribonucleotide reductase [Scheffersomyces stipitis CBS 6054] gi|149385013|gb|ABN64305.2| small subunit of ribonucleotide reductase [Scheffersomyces stipitis CBS 6054] Length = 417 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + + ++ EA +E + + +P +G+N Sbjct: 286 RDEGLHTDFACLLFS-------HLQNRPDAEIVEKIITEAVKIEKEFFTDALPSSLLGMN 338 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G + ++ T NPF +M E I L + NFFE RV++YQ+ Sbjct: 339 AELMCQYVEFVADRLLVALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 395 >gi|254517517|ref|ZP_05129573.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium sp. 7_2_43FAA] gi|226911266|gb|EEH96467.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium sp. 7_2_43FAA] Length = 344 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/123 (26%), Positives = 65/123 (52%), Gaps = 2/123 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +++ ++++E P ++T E + + + M+ A EI++ + + G+N Sbjct: 218 RDENTHLWLFRNILKELQLEQPEIFTDEVKNQLKEMMKTAVEHEISWGNYVIGDNIQGIN 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 Y++++ N R IGL+ +++ + NP W+ + D K +FFE + T Y + Sbjct: 278 KNLINDYIKYLGNLRMKAIGLDAIYEGHDNNPAAWVDILSDANSVKTDFFEAKSTAYAKA 337 Query: 120 AEL 122 L Sbjct: 338 GAL 340 >gi|159465835|ref|XP_001691128.1| ribonucleoside-diphosphate reductase small chain [Chlamydomonas reinhardtii] gi|158279814|gb|EDP05574.1| ribonucleoside-diphosphate reductase small chain [Chlamydomonas reinhardtii] Length = 394 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + + T+ + + + ++ EA +E + E +P +G+N Sbjct: 267 RDEGLHCDFACMLFSMLN-------TRIDETRVKQIIVEAVEIEQEFCTEALPVDLIGMN 319 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY+QF+A+R +G + NPF +M E+I L+ + NFFE RV +YQ+ Sbjct: 320 SRLMAQYIQFVADRLLVSLGCAKQYNVV-NPFEFM-EMISLQGKTNFFEKRVGDYQKNG 376 >gi|37551487|gb|AAQ93139.1| ribonucleotide reductase small subunit [Vaccinia virus] gi|38348909|gb|AAR17885.1| ribonucleotide reductase small subunit [Vaccinia virus] gi|88900660|gb|ABD57572.1| VACV040 [Vaccinia virus] gi|90819703|gb|ABD98513.1| VACV-DUKE-051 [Vaccinia virus] Length = 319 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R ++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRYIITDAVSIEQEFLTAALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302 >gi|323486976|ref|ZP_08092290.1| hypothetical protein HMPREF9474_04041 [Clostridium symbiosum WAL-14163] gi|323399688|gb|EGA92072.1| hypothetical protein HMPREF9474_04041 [Clostridium symbiosum WAL-14163] Length = 347 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +++ E P L+++E R M+ E EIA+ + GL Sbjct: 219 RDENTHLWLFGSIIRELQTEEPSLFSREKTDCYREMIREGCEQEIAWGCYAIGDEVPGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y++++ N RC +G EPL+ Y P W+S+ + K +FFE R T Y Sbjct: 279 KQMITDYIRYLGNLRCSNLGFEPLYDGYAHEPETMAWVSQYSNANMIKTDFFEARSTAYA 338 Query: 118 QGAEL 122 + + L Sbjct: 339 KSSAL 343 >gi|9632043|ref|NP_048832.1| hypothetical protein PBCV1_A476R [Paramecium bursaria Chlorella virus 1] gi|1620147|gb|AAC96843.1| contains ribonucleotide reductase (RR) signature; similar to tobacco RR small subunit, corresponds to Swiss-Prot Accession Number P49730 [Paramecium bursaria Chlorella virus 1] Length = 324 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 70/122 (57%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH FG + ++++ + P + + ++ EA E + + +P +G+N Sbjct: 200 RDEGLHQQFGELMYSKLQNKLPF-------ETVKQIITEAVENEKEFICDAIPCRLIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G E ++ ++NPF +M E+I L+ + NFFE RV++YQ+ Sbjct: 253 AELMGQYIEFVADRIFVALGYEKVYN-SKNPFAFM-ELISLQGKTNFFEKRVSDYQRPGV 310 Query: 122 LK 123 +K Sbjct: 311 MK 312 >gi|323692021|ref|ZP_08106269.1| ribonucleoside-diphosphate reductase [Clostridium symbiosum WAL-14673] gi|323503944|gb|EGB19758.1| ribonucleoside-diphosphate reductase [Clostridium symbiosum WAL-14673] Length = 347 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +++ E P L+++E R M+ E EIA+ + GL Sbjct: 219 RDENTHLWLFGSIIRELQTEEPSLFSREKTDCYREMIREGCEQEIAWGCYAIGDEVPGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y++++ N RC +G EPL+ Y P W+S+ + K +FFE R T Y Sbjct: 279 KQMITDYIRYLGNLRCSNLGFEPLYDGYVHEPETMAWVSQYSNANMIKTDFFEARSTAYA 338 Query: 118 QGAEL 122 + + L Sbjct: 339 KSSAL 343 >gi|163801385|ref|ZP_02195284.1| ribonucleoside-diphosphate reductase 1, beta subunit [Vibrio sp. AND4] gi|159174874|gb|EDP59674.1| ribonucleoside-diphosphate reductase 1, beta subunit [Vibrio sp. AND4] Length = 310 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 16/129 (12%) Query: 2 RDESLHLNFG---IDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58 RDE LH +F + Q K+ QQ+ + EA +E + E +P + Sbjct: 190 RDEGLHFSFSALLFKTLGQGKVT---------QQEFEEICREAVSIEKEFVTEALPVDLI 240 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ- 117 G+NA QY++ A+ G P F +ENPF +M ++D++ + NFFE RVTEY+ Sbjct: 241 GMNAELMCQYIEHTADVIADLFGFNPAFG-SENPFDYM-RLLDMEGKTNFFEKRVTEYKR 298 Query: 118 -QGAELKWD 125 Q +L +D Sbjct: 299 PQDRQLSFD 307 >gi|157952945|ref|YP_001497837.1| hypothetical protein NY2A_B641R [Paramecium bursaria Chlorella virus NY2A] gi|155123172|gb|ABT15040.1| hypothetical protein NY2A_B641R [Paramecium bursaria Chlorella virus NY2A] Length = 324 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH FG ++ L K + + ++ EA E + + +P +G+N Sbjct: 200 RDEGLHQQFG-------ELMYSKLQNKLSFETIKQIIMEAVTNEKEFICDAIPCSMIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 A QY++F+A+R +G E ++ ++NPF +M E+I L+ + NFFE RV++YQ+ Sbjct: 253 ADLMNQYIEFVADRIFTALGYEKVYN-SKNPFAFM-ELISLEGKTNFFEKRVSDYQR 307 >gi|317012862|gb|ADU83470.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori Lithuania75] Length = 341 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E ++ +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ +++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 >gi|260950985|ref|XP_002619789.1| hypothetical protein CLUG_00948 [Clavispora lusitaniae ATCC 42720] gi|238847361|gb|EEQ36825.1| hypothetical protein CLUG_00948 [Clavispora lusitaniae ATCC 42720] Length = 419 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 11/120 (9%) Query: 2 RDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 RDE LH +F + + + NP + K ++ EA +E Y + +P +G+ Sbjct: 289 RDEGLHTDFACLLFSHLNNRPNPAIVEK--------IITEAVTIEKEYFTDALPASLLGM 340 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 N QY++F+A+R +G + ++ T NPF +M E I L + NFFE RV++YQ+ Sbjct: 341 NCDLMCQYVEFVADRLLVALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 398 >gi|321476700|gb|EFX87660.1| hypothetical protein DAPPUDRAFT_306462 [Daphnia pulex] Length = 378 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ +++ A +E + + +P +G+N Sbjct: 251 RDEGLHTDFACVMFK-------HLVNKPPKERIIEIINNAVKIEQEFLTDALPVEMIGMN 303 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R ++G L+ +ENPF +M E I L+ + NFFE +V EYQ+ Sbjct: 304 CRLMRQYIEFVADRLLLELGCTKLYN-SENPFDFM-EHISLEGKTNFFEKKVGEYQKAG 360 >gi|21492474|ref|NP_659593.1| Ribonucleotide reductase, small subunit [Sheeppox virus] Length = 321 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +K + + ++ EA +E + +P +G+N Sbjct: 196 RDEGLHCDFACLIFKHLKYPPSN-------EIITIIIKEAVSIEKEFLTNIIPVKLIGMN 248 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++FIA+R ++G + +F + NPF +M E I L+ + NFFE RV+EYQ+ Sbjct: 249 CDLMSQYIEFIADRLLLELGCDKVF-MSINPFDFM-ENISLEGKTNFFEKRVSEYQK 303 >gi|270000178|gb|ACZ57936.1| m015L [Myxoma virus] Length = 103 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 55/88 (62%), Gaps = 2/88 (2%) Query: 31 QQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90 +++ +++ EA ++E + E +P +G+N QY++F+A+R ++G +F T Sbjct: 1 EERVASIIKEAVVIEQRFLTEALPVRLIGMNCELMCQYIEFVADRLIAELGYSKIFSAT- 59 Query: 91 NPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 NPF +M E I L+ + NFFE RV++YQ+ Sbjct: 60 NPFDFM-ENISLEGKTNFFEKRVSDYQR 86 >gi|115387427|ref|XP_001211219.1| ribonucleoside-diphosphate reductase small chain [Aspergillus terreus NIH2624] gi|114195303|gb|EAU37003.1| ribonucleoside-diphosphate reductase small chain [Aspergillus terreus NIH2624] Length = 401 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +Q ++ EA +E + + +P +G+N Sbjct: 267 RDEGLHTDFACLLFS-------HLNNRPSKQVVEDIIVEAVAIEKEFLTDALPVALLGMN 319 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G F T NPF +M E I L + NFFE RV +YQ+ Sbjct: 320 SKLMCQYIEFVADRLLVALGNNKYFHST-NPFDFM-ESISLAGKTNFFEKRVGDYQKAG 376 >gi|1808636|emb|CAA64118.1| G4L protein [Cowpox virus] Length = 319 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 63/117 (53%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ ++++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVKSIITDAVSIEQEFLTAALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302 >gi|268575178|ref|XP_002642568.1| C. briggsae CBR-RNR-2 protein [Caenorhabditis briggsae] gi|187023588|emb|CAP37241.1| CBR-RNR-2 protein [Caenorhabditis briggsae AF16] Length = 365 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 64/117 (54%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K Q++ ++ +A +E + E +P +G+N Sbjct: 240 RDEGLHRDFACLLYSMLQ-------NKLSQERIFEIIRDAVAIEQEFLTEALPVDMIGMN 292 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+ ++G + L+ +NPF +M E I + + NFFE RV+EYQ+ Sbjct: 293 CRLMSQYIEFVADHLLQELGCDKLYN-VKNPFDFM-ENISIDGKTNFFEKRVSEYQR 347 >gi|297745764|emb|CBI15820.3| unnamed protein product [Vitis vinifera] Length = 269 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 R E LH +F + + ++ + P W QK ++HEA +E + E +P +G+ Sbjct: 141 RYEGLHCDFACLLYSLLQKQLP--W-----QKVHHIVHEAMEIETQFICEALPCALIGMK 193 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A Y++F+ +R +G E + ENPF WM E I L+ NFF+ R+ +YQ+ + Sbjct: 194 ATLMSHYIKFVVDRLLVALGYERKYN-VENPFDWM-EFIFLQGNANFFQRRMGDYQKAS 250 >gi|108563454|ref|YP_627770.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori HPAG1] gi|107837227|gb|ABF85096.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter pylori HPAG1] Length = 341 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E + +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ +++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 >gi|302682638|ref|XP_003031000.1| hypothetical protein SCHCODRAFT_57055 [Schizophyllum commune H4-8] gi|300104692|gb|EFI96097.1| hypothetical protein SCHCODRAFT_57055 [Schizophyllum commune H4-8] Length = 362 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 66/119 (55%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F ++ ++ PH + ++ EA +E + + +P +G+N Sbjct: 238 RDEGMHTDFACLLLTHMR-RRPH------PEVIEMIIKEAVAIEKEFLTDALPVSLIGMN 290 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G + ++ T NPF +M ++I L+ + NFFE RV++Y+ A Sbjct: 291 ADLMCQYIEFVADRLLVALGNDKVWNAT-NPFDFM-DMISLQGKTNFFEKRVSDYKIAA 347 >gi|156386903|ref|XP_001634150.1| predicted protein [Nematostella vectensis] gi|156221230|gb|EDO42087.1| predicted protein [Nematostella vectensis] Length = 384 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K ++ R ++ +A ++E + +P +G+N Sbjct: 259 RDEGLHCDFAC-------LMYKYLVNKPDEETVRGIIKDAVVIEQEFLTSALPVKLIGMN 311 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R + + ++ ENPF +M E I L+ + NF+E RV EYQ+ Sbjct: 312 CALMRQYIEFVADRLLVALNCQKVYN-VENPFDFM-ENISLEGKTNFYEKRVGEYQKSG 368 >gi|39977011|ref|XP_369893.1| hypothetical protein MGG_06408 [Magnaporthe oryzae 70-15] gi|145016179|gb|EDK00669.1| hypothetical protein MGG_06408 [Magnaporthe oryzae 70-15] Length = 403 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + + P+ ++ + ++ +A +E + E +P +G+N Sbjct: 260 RDEGLHTDFACLLFSLLN-NRPN------KEVVKEIVVDAVKIEQEFLTEALPCALLGMN 312 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A +QY++F+A+R +G E +++ T NPF +M E I L + NFFE RV EYQ+ Sbjct: 313 ANLMKQYIEFVADRLLVALGNEKVYRAT-NPFDFM-ENISLGGKTNFFEKRVGEYQKAG 369 >gi|308490921|ref|XP_003107652.1| hypothetical protein CRE_13354 [Caenorhabditis remanei] gi|308250521|gb|EFO94473.1| hypothetical protein CRE_13354 [Caenorhabditis remanei] Length = 147 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + L K Q++ ++ +A +E + E +P +G+N Sbjct: 22 RDEGLHRDFACLLYSM-------LQNKLTQERIFEIIKDAVCIEQEFLTEALPVDMIGMN 74 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+ ++G + L+ +NPF +M E I + + NFFE RV+EYQ+ Sbjct: 75 CRLMSQYIEFVADHLLAELGCDKLYN-VKNPFDFM-ENISIDGKTNFFEKRVSEYQR 129 >gi|261839822|gb|ACX99587.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori 52] Length = 341 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E + +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ +++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 >gi|207092116|ref|ZP_03239903.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori HPKX_438_AG0C1] Length = 341 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E + +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ +++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 >gi|68304258|ref|YP_249726.1| RR2 [Chrysodeixis chalcites nucleopolyhedrovirus] gi|67973087|gb|AAY84053.1| RR2 [Chrysodeixis chalcites nucleopolyhedrovirus] Length = 318 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 6/117 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F N+ E L + K +M EA +E + +P +G+N Sbjct: 194 RDEGLHTDFACLYYNKYIPEKNKLS----KTKVLSMFVEAVDIEKDFFTNALPVAMLGMN 249 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + S +Y++F+A+R ++G + F T NPF +M+ I L+ + NFFE RV EY++ Sbjct: 250 SQSMCEYIEFVADRLLFELGYDKHFN-TANPFEFMNN-ISLEGKTNFFEKRVGEYKR 304 >gi|15644992|ref|NP_207162.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori 26695] gi|2500210|sp|P55983|RIR2_HELPY RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit gi|2313466|gb|AAD07432.1| ribonucleoside diphosphate reductase, beta subunit (nrdB) [Helicobacter pylori 26695] Length = 341 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E + +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ +++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 >gi|317182342|dbj|BAJ60126.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori F57] Length = 341 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E + +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ +++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 >gi|18640102|ref|NP_570176.1| SPV016 ribonucleotide reductase, small subunit [Swinepox virus] gi|18448509|gb|AAL69755.1| SPV016 ribonucleotide reductase, small subunit [Swinepox virus] Length = 320 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ +++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSKEVITSIIIDAVNIEKEFLTVAIPVDLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+R ++G E +F NPF +M E I L+ + NFFE RV+EYQ+ Sbjct: 248 CCLMSQYIEFVADRLLTELGCEKVFN-VYNPFSFM-EYISLEGKTNFFERRVSEYQK 302 >gi|299472857|emb|CBN80426.1| EsV-1-128 [Ectocarpus siliculosus] Length = 419 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH + + HL K Q++ + A +E + +P +G++ Sbjct: 294 RDEGLHATASVLIYK-------HLRNKLPQERVHEIFEHAVSVECEFISSALPVALIGIS 346 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S +Y++F+A+ +Q+G + ++ NPF WM ++I L+ + NFFE RV EY + Sbjct: 347 EKSMTEYIKFVADYWLNQLGYDKVYN-CANPFEWM-DMISLQGKTNFFENRVAEYSKPGV 404 Query: 122 L 122 L Sbjct: 405 L 405 >gi|308490981|ref|XP_003107682.1| CRE-RNR-2 protein [Caenorhabditis remanei] gi|308250551|gb|EFO94503.1| CRE-RNR-2 protein [Caenorhabditis remanei] Length = 377 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 64/117 (54%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K Q++ ++ +A +E + E +P +G+N Sbjct: 252 RDEGLHRDFACLLYSMLQ-------NKLTQERIFEIIRDAVCIEQEFLTEALPVDMIGMN 304 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+ ++G + L+ +NPF +M E I + + NFFE RV+EYQ+ Sbjct: 305 CRLMSQYIEFVADHLLAELGCDKLYN-VKNPFDFM-ENISIDGKTNFFEKRVSEYQR 359 >gi|146090970|ref|XP_001466408.1| ribonucleoside-diphosphate reductase small chain [Leishmania infantum JPCM5] gi|134070770|emb|CAM69127.1| putative ribonucleoside-diphosphate reductase small chain [Leishmania infantum JPCM5] Length = 388 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N Sbjct: 261 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 314 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G E ++ T+ PF +M E+I L+ + NFFE +V EYQ+ Sbjct: 315 AELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAG 371 >gi|331245491|ref|XP_003335382.1| ribonucleoside-diphosphate reductase subunit M2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309314372|gb|EFP90963.1| ribonucleoside-diphosphate reductase subunit M2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 380 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++ PH + ++ +A +E + + +P +G+N Sbjct: 243 RDEGLHTDFACLLFTHLE-RRPH------PDTVQAIIAQAVEIEKEFLSDALPCKLIGMN 295 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G E + T NPF +M E+I L + NFFE RV++Y + Sbjct: 296 ADLMCQYIEFVADRLLVALGNEKFYNAT-NPFDFM-EMISLSGKTNFFEKRVSDYAKAG 352 >gi|146090952|ref|XP_001466403.1| ribonucleoside-diphosphate reductase small chain [Leishmania infantum JPCM5] gi|321399462|emb|CBZ08664.1| putative ribonucleoside-diphosphate reductase small chain [Leishmania infantum JPCM5] Length = 392 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N Sbjct: 265 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G E ++ T+ PF +M E+I L+ + NFFE +V EYQ+ Sbjct: 319 AELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAG 375 >gi|332971065|gb|EGK10035.1| ribonucleotide-diphosphate reductase beta subunit [Desmospora sp. 8437] Length = 342 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 2/119 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH+ + + ++ E P L T+E + A LEI + + F G+ Sbjct: 214 RDEQLHVRLFVQIYRELLEEIPELNTEENRNFVTESFRRAAELEIRWGETVLGDRFDGIR 273 Query: 62 APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118 Y++F+AN+R H++G E P Y +NP W+ D+ + K +FFE + +Y + Sbjct: 274 PDELRAYIRFMANKRAHELGAERPFAGYRKNPMRWVIAYQDVNRGKQDFFEGKSRQYSK 332 >gi|304321610|ref|YP_003855253.1| ribonucleoside-diphosphate reductase subunit beta [Parvularcula bermudensis HTCC2503] gi|303300512|gb|ADM10111.1| ribonucleoside-diphosphate reductase, beta subunit [Parvularcula bermudensis HTCC2503] Length = 340 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 2/121 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDESLH + + ++ E L T LE + G V G Sbjct: 197 IRDESLHCEGMVRLFHEFARETGAL-TPAVADDIVDCCKTVVDLEDKFIELAFEAGEVEG 255 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + + Y++ IA+ R Q+GL P+F +P PW+ E+++ + NFFE R TEY +G Sbjct: 256 MTPDDIKAYIRHIADWRLSQLGLPPVFAADNHPLPWLREILNGVEHANFFEARATEYSKG 315 Query: 120 A 120 A Sbjct: 316 A 316 >gi|89097912|ref|ZP_01170799.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp. NRRL B-14911] gi|89087414|gb|EAR66528.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp. NRRL B-14911] Length = 353 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 4/118 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH++ + + +I E P TKE + + + EA LEI +A + G+ Sbjct: 224 RDEQLHVDLFVKIFREILDEYPEQNTKELAEFAESTFREAAYLEIEWARSIIGDKISGIL 283 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS--EVIDLKKEKNFFETRVTEY 116 E+Y++F AN R +Q+G F+ + NP W+ E +DL K +FFE + +Y Sbjct: 284 IGDVEEYIRFYANVRSNQLGFNRPFEGSRTNPLRWIKAYEEVDLGK-SDFFEQKPRQY 340 >gi|291562343|emb|CBL41159.1| Ribonucleotide reductase, beta subunit [butyrate-producing bacterium SS3/4] Length = 346 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I +++ E P L+T Q R M+ E EIA+ H + GLN Sbjct: 218 RDENTHLWLFRNIITELQKEQPELFTAGSVQALREMMREGVEQEIAWGHYVIGDDIPGLN 277 Query: 62 APSCEQYMQFIANRRCHQIG---LEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y++++ N R +G L P F+ W+S+ D K +FFE R T Y Sbjct: 278 RQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVKTDFFEARSTAYA 337 Query: 118 QGAEL 122 + L Sbjct: 338 KSTAL 342 >gi|217034470|ref|ZP_03439882.1| hypothetical protein HP9810_890g15 [Helicobacter pylori 98-10] gi|216943072|gb|EEC22549.1| hypothetical protein HP9810_890g15 [Helicobacter pylori 98-10] gi|317177841|dbj|BAJ55630.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori F16] Length = 341 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E + +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIESLWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ +++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 >gi|317009697|gb|ADU80277.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori India7] Length = 341 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E + +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEALWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ +++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 >gi|289449785|ref|YP_003474451.1| ribonucleoside-diphosphate reductase subunit beta [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184332|gb|ADC90757.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 400 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 8/127 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++++++++E P L++ E ++ R M+ E EIA+ H + GL Sbjct: 272 RDENTHLWLFRNILSELQVERPDLFSAELVEEYRAMIKEGAEQEIAWGHYVLGDDIPGLT 331 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKKEK-NFFETRVTE 115 Y+Q++AN R +G + Y +N W+S+ D K +FFE + T Sbjct: 332 RQMVTDYIQYLANLRAQNLGFA--YIYPDNHSEPASMSWISQYSDANMVKTDFFEAKSTA 389 Query: 116 YQQGAEL 122 Y + + Sbjct: 390 YAKSTAM 396 >gi|208434985|ref|YP_002266651.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter pylori G27] gi|208432914|gb|ACI27785.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter pylori G27] Length = 341 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E + +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEALWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ +++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 >gi|217032591|ref|ZP_03438080.1| hypothetical protein HPB128_159g17 [Helicobacter pylori B128] gi|298735909|ref|YP_003728434.1| ribonucleoside-diphosphate reductase subunit beta [Helicobacter pylori B8] gi|216945727|gb|EEC24352.1| hypothetical protein HPB128_159g17 [Helicobacter pylori B128] gi|298355098|emb|CBI65970.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter pylori B8] Length = 341 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E + +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEALWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ +++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 >gi|255037048|ref|YP_003087669.1| Ribonucleoside-diphosphate reductase [Dyadobacter fermentans DSM 18053] gi|254949804|gb|ACT94504.1| Ribonucleoside-diphosphate reductase [Dyadobacter fermentans DSM 18053] Length = 331 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH F + + H+ + Q++ ++ +A +E + E +P +G+N Sbjct: 201 RDEGLHCEFACLLYTK------HILNQLPQERVIEIMLDAVEIEKEFVSEALPVSLIGMN 254 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A +QY+++IA+ ++G F + NPF +M E+I L + NFFE RV EYQ+ Sbjct: 255 ADLMKQYIEYIADFWLERLGCPKQFG-SANPFDFM-ELISLPGKTNFFEKRVGEYQKAG 311 >gi|156545974|ref|XP_001606963.1| PREDICTED: similar to ENSANGP00000013211 [Nasonia vitripennis] Length = 388 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K +++ +++ +A +E + + +P +G+N Sbjct: 261 RDEGLHCDFACLMFK-------HIVQKPSEERVISIIKDAVTIEQEFLTDALPVEMIGMN 313 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+R ++G ++ +ENPF +M E I L+ + NFFE +V EYQ+ Sbjct: 314 CRLMCQYIEFVADRLLGELGCPKVYN-SENPFDFM-EHISLEGKTNFFEKKVGEYQK 368 >gi|50286273|ref|XP_445565.1| hypothetical protein [Candida glabrata CBS 138] gi|49524870|emb|CAG58476.1| unnamed protein product [Candida glabrata] Length = 400 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K + ++ EA +E Y + +P +G+N Sbjct: 271 RDEGLHTDFACLLF-------AHLNHKPDPEVVERIVTEAVEIEQRYFLDALPVALLGMN 323 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R G + ++ ENPF +M E I L + NFFE RV++YQ+ Sbjct: 324 AQLMNQYVEFVADRLLVAFGNKKVYN-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380 >gi|226294144|gb|EEH49564.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides brasiliensis Pb18] Length = 325 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ H + E QK ++ EA +E + + +P +G+N Sbjct: 186 RDEGLHTDFACLLFSHLR----HRPSPEAVQK---IITEAVAIEQEFLTDALPCALLGMN 238 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G + ++ T NPF +M I L + NFFE RV +YQ+ Sbjct: 239 AKLMCQYIEFVADRLLVALGNKKVYNST-NPFDFMDN-ISLTGKTNFFEKRVGDYQKAG 295 >gi|225684487|gb|EEH22771.1| ribonucleoside-diphosphate reductase small chain A [Paracoccidioides brasiliensis Pb03] Length = 413 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ H + E QK ++ EA +E + + +P +G+N Sbjct: 274 RDEGLHTDFACLLFSHLR----HRPSPEAVQK---IITEAVAIEQEFLTDALPCALLGMN 326 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G + ++ T NPF +M I L + NFFE RV +YQ+ Sbjct: 327 AKLMCQYIEFVADRLLVALGNKKVYNST-NPFDFMDN-ISLTGKTNFFEKRVGDYQKAG 383 >gi|544843|gb|AAB29634.1| C8L product [variola virus VAR, India-1967, Peptide, 333 aa] Length = 333 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 209 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + YM+F+A+R ++G + ++ T NP +M E I L+ + NFFE RV EYQ+ Sbjct: 262 CEMMKTYMEFVADRLISELGFKRIYNVT-NPSDFM-ENISLEGKTNFFEKRVGEYQK 316 >gi|157953769|ref|YP_001498660.1| hypothetical protein AR158_C579R [Paramecium bursaria Chlorella virus AR158] gi|156068417|gb|ABU44124.1| hypothetical protein AR158_C579R [Paramecium bursaria Chlorella virus AR158] Length = 324 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 70/122 (57%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH FG + ++++ + P + + ++ EA E + + +P +G+N Sbjct: 200 RDEGLHQQFGELMYSKLQNKLPF-------ETVKQIITEAVENEKEFICDAIPCRLIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G E ++ ++NPF +M E+I L+ + NFFE RV++YQ+ Sbjct: 253 SELMGQYIEFVADRIFIALGYEKVYN-SKNPFAFM-ELISLQGKTNFFEKRVSDYQRPGV 310 Query: 122 LK 123 +K Sbjct: 311 MK 312 >gi|313235850|emb|CBY19835.1| unnamed protein product [Oikopleura dioica] Length = 382 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K Q++ ++ +A +E + + +P +G+N Sbjct: 251 RDEGLHTDFAC-------LMYKHMVQKPSQEQIIAIIRDAVSIEQEFLTDALPVRLIGMN 303 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + Y++F+A+R ++ ++K ENPF +M E+I L+ + NFFE +V+EY + Sbjct: 304 CDLMKTYIEFVADRLLVELDCPKIYK-VENPFDFM-EMISLEGKTNFFEKKVSEYARAG 360 >gi|306478720|ref|NP_042072.2| Ribonucleoside-diphosphate reductase small chain [Variola virus] gi|464615|sp|P33799|RIR2_VAR67 RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit Length = 319 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + YM+F+A+R ++G + ++ T NP +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYMEFVADRLISELGFKRIYNVT-NPSDFM-ENISLEGKTNFFEKRVGEYQK 302 >gi|297209|emb|CAA48969.1| C8L [Variola virus] gi|745144|prf||2015436AF C8L gene Length = 333 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 209 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + YM+F+A+R ++G + ++ T NP +M E I L+ + NFFE RV EYQ+ Sbjct: 262 CEMMKTYMEFVADRLISELGFKRIYNVT-NPSDFM-ENISLEGKTNFFEKRVGEYQK 316 >gi|45184688|ref|NP_982406.1| AAL136Cp [Ashbya gossypii ATCC 10895] gi|44980034|gb|AAS50230.1| AAL136Cp [Ashbya gossypii ATCC 10895] Length = 422 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K + ++ EA +E Y + +P +G+N Sbjct: 292 RDEGLHTDFACLLF-------AHLNNKPDTEIVEKIITEAVEIEKRYFQDAIPVALLGMN 344 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G + + + NPF +M E I L + NFFE RV++YQ+ Sbjct: 345 SSLMNQYVEFVADRLLVALGNKKYYNVS-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 401 >gi|190896546|gb|ACE96786.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223 >gi|190896508|gb|ACE96767.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896514|gb|ACE96770.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896522|gb|ACE96774.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896540|gb|ACE96783.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896542|gb|ACE96784.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223 >gi|283955349|ref|ZP_06372848.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni subsp. jejuni 414] gi|283793109|gb|EFC31879.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni subsp. jejuni 414] Length = 340 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+ E K M +A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 E+Y+ ++ ++R I L+ L+ ++P W+ + +K NFFE++VT Y +G+ Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334 >gi|190896520|gb|ACE96773.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223 >gi|313213932|emb|CBY40745.1| unnamed protein product [Oikopleura dioica] Length = 418 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K Q++ ++ +A +E + + +P +G+N Sbjct: 287 RDEGLHTDFAC-------LMYKHMVQKPSQEQIIAIIRDAVSIEQEFLTDALPVRLIGMN 339 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + Y++F+A+R ++ ++K ENPF +M E+I L+ + NFFE +V+EY + Sbjct: 340 CDLMKTYIEFVADRLLVELDCPKIYK-VENPFDFM-EMISLEGKTNFFEKKVSEYARAG 396 >gi|190896510|gb|ACE96768.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896556|gb|ACE96791.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896562|gb|ACE96794.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223 >gi|67515571|ref|XP_657671.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4] gi|40746089|gb|EAA65245.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4] gi|259489743|tpe|CBF90266.1| TPA: Ribonucleotide reductase [Source:UniProtKB/TrEMBL;Acc:Q9HEW8] [Aspergillus nidulans FGSC A4] Length = 406 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ ++ EA +E + + +P +G+N Sbjct: 269 RDEGLHTDFACLLFS-------HLNWRPSKKVVEDIIVEAVAIEKEFLTDALPCALLGMN 321 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G + F T NPF +M E I L + NFFE RV +YQ+ Sbjct: 322 AKLMCQYIEFVADRLLVALGNKKYFNAT-NPFDFM-ESISLAGKTNFFEKRVGDYQKAG 378 >gi|295670491|ref|XP_002795793.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides brasiliensis Pb01] gi|226284878|gb|EEH40444.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides brasiliensis Pb01] Length = 325 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ H + E QK ++ EA +E + + +P +G+N Sbjct: 186 RDEGLHTDFACLLFSHLR----HRPSPEAVQK---IITEAVAIEQEFLTDALPCALLGMN 238 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G + ++ T NPF +M I L + NFFE RV +YQ+ Sbjct: 239 AKLMCQYIEFVADRLLVALGNKKVYNST-NPFDFMDN-ISLTGKTNFFEKRVGDYQKAG 295 >gi|57237291|ref|YP_178304.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter jejuni RM1221] gi|148926379|ref|ZP_01810063.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter jejuni subsp. jejuni CG8486] gi|57166095|gb|AAW34874.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni RM1221] gi|145844771|gb|EDK21876.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter jejuni subsp. jejuni CG8486] gi|315057661|gb|ADT71990.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Campylobacter jejuni subsp. jejuni S3] Length = 340 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+ E K M +A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 E+Y+ ++ ++R I L+ L+ ++P W+ + +K NFFE++VT Y +G+ Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334 >gi|86149605|ref|ZP_01067835.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni subsp. jejuni CF93-6] gi|86151167|ref|ZP_01069382.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|86153704|ref|ZP_01071907.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni subsp. jejuni HB93-13] gi|88597173|ref|ZP_01100408.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|121613260|ref|YP_999944.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter jejuni subsp. jejuni 81-176] gi|157414529|ref|YP_001481785.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter jejuni subsp. jejuni 81116] gi|167004901|ref|ZP_02270659.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter jejuni subsp. jejuni 81-176] gi|218561895|ref|YP_002343674.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|283955655|ref|ZP_06373148.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni subsp. jejuni 1336] gi|315123818|ref|YP_004065822.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85839873|gb|EAQ57132.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni subsp. jejuni CF93-6] gi|85841514|gb|EAQ58761.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|85842665|gb|EAQ59877.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni subsp. jejuni HB93-13] gi|87250215|gb|EAQ73173.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|88190234|gb|EAQ94208.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|112359601|emb|CAL34386.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|157385493|gb|ABV51808.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter jejuni subsp. jejuni 81116] gi|283792880|gb|EFC31656.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni subsp. jejuni 1336] gi|284925507|gb|ADC27859.1| ribonucleoside-diphosphate reductase subunit beta [Campylobacter jejuni subsp. jejuni IA3902] gi|307747171|gb|ADN90441.1| Ribonucleoside-diphosphate reductase subunit beta [Campylobacter jejuni subsp. jejuni M1] gi|315017540|gb|ADT65633.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315928159|gb|EFV07477.1| ribonucleotide reductase, small chain family protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315932030|gb|EFV10983.1| ribonucleotide reductase, small chain family protein [Campylobacter jejuni subsp. jejuni 327] Length = 340 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+ E K M +A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 E+Y+ ++ ++R I L+ L+ ++P W+ + +K NFFE++VT Y +G+ Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334 >gi|190896550|gb|ACE96788.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223 >gi|190896516|gb|ACE96771.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223 >gi|205356539|ref|ZP_03223302.1| ribonucleoside diphosphate reductase beta chain [Campylobacter jejuni subsp. jejuni CG8421] gi|205345544|gb|EDZ32184.1| ribonucleoside diphosphate reductase beta chain [Campylobacter jejuni subsp. jejuni CG8421] Length = 340 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+ E K M +A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 E+Y+ ++ ++R I L+ L+ ++P W+ + +K NFFE++VT Y +G+ Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334 >gi|190896532|gb|ACE96779.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896554|gb|ACE96790.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223 >gi|190896538|gb|ACE96782.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896548|gb|ACE96787.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896558|gb|ACE96792.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223 >gi|190896564|gb|ACE96795.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223 >gi|190896552|gb|ACE96789.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223 >gi|254572986|ref|XP_002493602.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR) complex [Pichia pastoris GS115] gi|238033401|emb|CAY71423.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR) complex [Pichia pastoris GS115] gi|328354568|emb|CCA40965.1| ribonucleoside-diphosphate reductase subunit M2 [Pichia pastoris CBS 7435] Length = 400 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ ++ EA +E Y + +P +G+N Sbjct: 271 RDEGLHTDFACLLFS-------HLNNRASEEIVEKIITEAVEIEKRYFTDALPVSLLGMN 323 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R +G + ++ NPF +M E I L + NFFE RV++YQ+ Sbjct: 324 CSLMCQYVEFVADRLLVALGNKKVYN-VNNPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380 >gi|154340038|ref|XP_001565976.1| ribonucleoside-diphosphate reductase small chain [Leishmania braziliensis MHOM/BR/75/M2904] gi|134063294|emb|CAM45500.1| putative ribonucleoside-diphosphate reductase small chain [Leishmania braziliensis MHOM/BR/75/M2904] Length = 388 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N Sbjct: 261 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 314 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G E + T+ PF +M E+I L+ + NFFE +V EYQ+ Sbjct: 315 AELMAQYIEFVADRLLVSLGEEKHYNATQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAG 371 >gi|308809930|ref|XP_003082274.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus tauri] gi|116060742|emb|CAL57220.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus tauri] Length = 382 Score = 61.2 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 41/123 (33%), Positives = 61/123 (49%), Gaps = 17/123 (13%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLH----EATLLEIAYAHETMPKGF 57 RDE LH +F + + +NP S LH +A +E + + + Sbjct: 256 RDEGLHCDFACLLYGML--QNP---------LSEATLHHIVGDAVKIEKEFVCDALSCSL 304 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 VG+NA Y++F+A+R Q+G LF NPF WM E+I L+ + NFFE RV +YQ Sbjct: 305 VGMNADMMSTYIEFVADRLLIQLGASKLFNAV-NPFDWM-ELISLQGKANFFEHRVDQYQ 362 Query: 118 QGA 120 + Sbjct: 363 KAG 365 >gi|11878241|gb|AAG40862.1| ribonucleotide reductase [Emericella nidulans] Length = 406 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ ++ EA +E + + +P +G+N Sbjct: 269 RDEGLHTDFACLLFS-------HLNWRPSKKVVEDIIVEAVAIEKEFLTDALPCALLGMN 321 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G + F T NPF +M E I L + NFFE RV +YQ+ Sbjct: 322 AKLMCQYIEFVADRLLVALGNKEYFNAT-NPFDFM-ESISLAGKTNFFEKRVGDYQKAG 378 >gi|145249942|ref|XP_001401310.1| ribonucleoside-diphosphate reductase small chain [Aspergillus niger CBS 513.88] gi|134081995|emb|CAK46680.1| unnamed protein product [Aspergillus niger] Length = 396 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +Q ++ EA +E + + +P +G+N Sbjct: 263 RDEGLHTDFACLLFS-------HLNNRPSKQVVEDIIVEAVGIEQEFLTDALPVALLGMN 315 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G + + T NPF +M E I L + NFFE RV +YQ+ Sbjct: 316 SKLMCQYIEFVADRLLVALGNKKYYNAT-NPFDFM-ESISLAGKTNFFEKRVGDYQKAG 372 >gi|110763195|ref|XP_397443.3| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 isoform 1 [Apis mellifera] Length = 384 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + I ++ P ++ +++ +A +E + + +P +G+N Sbjct: 259 RDEGLHCDFACLMFKHI-VQKPSC------ERVTSIIKDAVKIEQEFLTDALPVEMIGMN 311 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 QY++F+A+R ++G + ++ +ENPF +M E I L+ + NFFE +V EYQ+ Sbjct: 312 CKLMCQYIEFVADRLLVELGCKKIY-MSENPFDFM-EHISLEGKTNFFEKKVGEYQK 366 >gi|225561749|gb|EEH10029.1| ribonucleotide reductase M2 B [Ajellomyces capsulatus G186AR] gi|240275354|gb|EER38868.1| ribonucleoside-diphosphate reductase subunit small [Ajellomyces capsulatus H143] gi|325091193|gb|EGC44503.1| ribonucleoside-diphosphate reductase subunit small [Ajellomyces capsulatus H88] Length = 413 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + + ++ EA +E + + +P +G+N Sbjct: 274 RDEGLHTDFACLLFS-------HLRHRPSPEAVEKIITEAVTIEQEFLSDALPVALLGMN 326 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G + ++ T NPF +M I L + NFFE RV +YQ+ Sbjct: 327 AKLMCQYIEFVADRLLVALGNKKVYNST-NPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 383 >gi|154337607|ref|XP_001565036.1| ribonucleoside-diphosphate reductase small chain [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062075|emb|CAM45178.1| putative ribonucleoside-diphosphate reductase small chain [Leishmania braziliensis MHOM/BR/75/M2904] Length = 392 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N Sbjct: 265 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G E + T+ PF +M E+I L+ + NFFE +V EYQ+ Sbjct: 319 AELMAQYIEFVADRLLVSLGEEKHYNATQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAG 375 >gi|314055235|ref|YP_004063573.1| ribonucleoside-diphosphate reductase small subunit-possible host origin [Ostreococcus tauri virus 2] gi|313575126|emb|CBI70139.1| ribonucleoside-diphosphate reductase small subunit-possible host origin [Ostreococcus tauri virus 2] Length = 408 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 63/117 (53%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH F +++ ++ + + ++ EA +E + + +P +G+N Sbjct: 287 RDEGLHQEFAVELFKTLR-------NRPTTETIHAIVKEAVEIEKGFILDALPCNLIGMN 339 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + +Y++++++R Q+G+ P++ +NPF +M E I L + NFFE RV +Y + Sbjct: 340 SEKMSEYIEYVSDRLLKQVGVPPIWN-AKNPFDFM-ENISLDGKTNFFEKRVGDYGK 394 >gi|170089003|ref|XP_001875724.1| ribonucleotide reductase, beta subunit [Laccaria bicolor S238N-H82] gi|164648984|gb|EDR13226.1| ribonucleotide reductase, beta subunit [Laccaria bicolor S238N-H82] Length = 422 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + +K PH + + ++ EA +E + + +P +G+N Sbjct: 281 RDEGMHTDFACLLFSHLK-RRPH------PEVVKHIIVEAVKIEQEFLTDALPVKLIGMN 333 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G E + T NPF +M ++I L+ + NFFE RV++Y + Sbjct: 334 ADLMCQYIEFVADRLLVSLGNEKHYNKT-NPFDFM-DMISLQGKTNFFEKRVSDYSKAG 390 >gi|17974949|ref|NP_536463.1| C10L [Monkeypox virus Zaire-96-I-16] gi|17529816|gb|AAL40494.1|AF380138_36 C10L [Monkeypox virus Zaire-96-I-16] gi|51342196|gb|AAU01240.1| MPXV-WRAIR030 [Monkeypox virus] gi|58220500|gb|AAW67788.1| MPXV-SL-030 [Monkeypox virus] gi|59858836|gb|AAX09131.1| MPXV-COP-030 [Monkeypox virus] gi|68448710|gb|AAY96833.1| ribonucleotide reductase small subunit [Monkeypox virus] gi|68448912|gb|AAY97034.1| ribonucleotide reductase small subunit [Monkeypox virus] gi|68449113|gb|AAY97234.1| ribonucleotide reductase small subunit [Monkeypox virus] gi|68449313|gb|AAY97433.1| ribonucleotide reductase small subunit [Monkeypox virus] gi|68449512|gb|AAY97631.1| ribonucleotide reductase small subunit [Monkeypox virus] gi|300872658|gb|ADK39060.1| ribonucleotide reductase small subunit [Monkeypox virus] Length = 319 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R ++ A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRFIITNAVSIEQEFLTVALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302 >gi|3220181|gb|AAC23560.1| ribonucleotide reductase M2 subunit [Leishmania amazonensis] Length = 354 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N Sbjct: 227 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G E + T+ PF +M E+I L+ + NFFE +V EYQ+ Sbjct: 281 AELMAQYIEFVADRLLVSLGEEKHYNSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAG 337 >gi|322493026|emb|CBZ28311.1| ribonucleoside-diphosphate reductase small chain,putative [Leishmania mexicana MHOM/GT/2001/U1103] Length = 388 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N Sbjct: 261 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 314 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G E + T+ PF +M E+I L+ + NFFE +V EYQ+ Sbjct: 315 AELMAQYIEFVADRLLVSLGEEKHYNSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAG 371 >gi|261189551|ref|XP_002621186.1| ribonucleotide reductase small subunit RnrA [Ajellomyces dermatitidis SLH14081] gi|239591422|gb|EEQ74003.1| ribonucleotide reductase small subunit RnrA [Ajellomyces dermatitidis SLH14081] gi|239613047|gb|EEQ90034.1| ribonucleotide reductase small subunit RnrA [Ajellomyces dermatitidis ER-3] gi|327356917|gb|EGE85774.1| ribonucleotide reductase M2 B [Ajellomyces dermatitidis ATCC 18188] Length = 413 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + + ++ EA +E + + +P +G+N Sbjct: 274 RDEGLHTDFACLLFS-------HLRHRPSPEAVERIITEAVTIEQEFLSDALPVALLGMN 326 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G + ++ T NPF +M I L + NFFE RV +YQ+ Sbjct: 327 AKLMCQYIEFVADRLLVALGNKKVYNST-NPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 383 >gi|168015485|ref|XP_001760281.1| predicted protein [Physcomitrella patens subsp. patens] gi|162688661|gb|EDQ75037.1| predicted protein [Physcomitrella patens subsp. patens] Length = 330 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + K + + ++ EA ++E + E + VG+N Sbjct: 200 RDEGLHCDFACLLYTLLN-------NKLSEDRVYEIVCEAVVIEQEFVCEALSCDLVGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +Y+ F+A+R +G + + NPF WM E+I L+ + NFFE RV EYQ+ + Sbjct: 253 KTLMSEYIDFVADRLLVSLGYPKKYN-SHNPFDWM-ELISLQGKTNFFEKRVGEYQKAS 309 >gi|323098642|gb|ADX22879.1| ribonucleotide reductase small subunit [Monkeypox virus] Length = 319 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R ++ A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRFIITNAVSIEQEFLTVALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302 >gi|307192386|gb|EFN75622.1| Ribonucleoside-diphosphate reductase subunit M2 [Harpegnathos saltator] Length = 344 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + I+ P ++ +T++ +A +E + + +P +G+N Sbjct: 214 RDEGLHCDFACLMFKHV-IQKPSF------ERVKTIIMDAVEIEKEFLTQALPVKLIGMN 266 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 Y++F+A+R +G + ++ +ENPF +M + I L+ + NFFE +V EY++ Sbjct: 267 CTLMCTYIEFVADRLFVALGFDKVYN-SENPFSFM-DFISLEGKTNFFEKKVGEYKK 321 >gi|323098445|gb|ADX22683.1| ribonucleotide reductase small subunit [Monkeypox virus] Length = 319 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R ++ A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRFIITNAVSIEQEFLTVALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302 >gi|322491821|emb|CBZ27094.1| ribonucleoside-diphosphate reductase small chain,putative [Leishmania mexicana MHOM/GT/2001/U1103] Length = 392 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N Sbjct: 265 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G E + T+ PF +M E+I L+ + NFFE +V EYQ+ Sbjct: 319 AELMAQYIEFVADRLLVSLGEEKHYNSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAG 375 >gi|13242599|ref|NP_077613.1| EsV-1-128 [Ectocarpus siliculosus virus 1] gi|13177402|gb|AAK14546.1|AF204951_128 EsV-1-128 [Ectocarpus siliculosus virus 1] Length = 419 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH + + +K P +++ + A +E + +P +G++ Sbjct: 294 RDEGLHATASVLIYKHLKNRLP-------RERVHEIFKHAVSVECEFISSALPVALIGIS 346 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S +Y++F+A+ +Q+G + ++ NPF WM ++I L+ + NFFE RV EY + Sbjct: 347 EKSMTEYIKFVADYWLNQLGYDKVYN-CANPFEWM-DMISLQGKTNFFENRVAEYSKPGV 404 Query: 122 L 122 L Sbjct: 405 L 405 >gi|225434341|ref|XP_002276454.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 841 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 R E LH +F + + ++ + P W QK ++HEA +E + E +P +G+ Sbjct: 713 RYEGLHCDFACLLYSLLQKQLP--W-----QKVHHIVHEAMEIETQFICEALPCALIGMK 765 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A Y++F+ +R +G E + ENPF WM E I L+ NFF+ R+ +YQ+ + Sbjct: 766 ATLMSHYIKFVVDRLLVALGYERKYN-VENPFDWM-EFIFLQGNANFFQRRMGDYQKAS 822 >gi|317062933|ref|ZP_07927418.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium ulcerans ATCC 49185] gi|313688609|gb|EFS25444.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium ulcerans ATCC 49185] Length = 353 Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 9/130 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +I+ ENP + E + +M +A EI + + + +G+ Sbjct: 225 RDELSHVVIFQHLLKEIRNENPDFFNDE---EIYSMFRKAVEQEINWTNHIIGNQILGIT 281 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116 + EQY +++AN R IGL+P+++ + +NP+ +++ D + E NFFE VT Y Sbjct: 282 EETTEQYTKWLANERLRSIGLKPIYEGFNKNPYKHLTKFADTEGEGNVKANFFEGTVTSY 341 Query: 117 QQGAELK-WD 125 + + WD Sbjct: 342 NMSSSIDGWD 351 >gi|313768358|ref|YP_004062038.1| hypothetical protein MpV1_155c [Micromonas sp. RCC1109 virus MpV1] gi|312599054|gb|ADQ91078.1| hypothetical protein MpV1_155c [Micromonas sp. RCC1109 virus MpV1] Length = 388 Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 68/128 (53%), Gaps = 13/128 (10%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH F +++ ++ K + +++ EA +E + + +P +G+N Sbjct: 267 RDEGLHQEFAVELFKLLR-------NKPSTETIHSIVKEAVEIEKNFILDALPCNLIGMN 319 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY----Q 117 + +Y++++++R Q+G P++ ++NPF +M E I L + NFFE RV +Y Sbjct: 320 SEKMSEYIEYVSDRLLKQVGQPPIWN-SKNPFDFM-ENISLDGKTNFFEKRVGDYGKLDD 377 Query: 118 QGAELKWD 125 AE+ +D Sbjct: 378 DSAEIGFD 385 >gi|325475472|gb|EGC78653.1| ribonucleoside-diphosphate reductase [Treponema denticola F0402] Length = 351 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +++ E P L+T + + R M+ E EIA+ + + GLN Sbjct: 223 RDENTHLWLFRSMIQELQKEEPQLFTPQNVELFRGMIREGCEQEIAWGNYVIGNDIPGLN 282 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 + Y+Q++ N RC +G P++ + E P W+S+ + K +FFE + T Y Sbjct: 283 SQMITDYIQYLGNLRCENLGFAPIYDGHKEEPQSMSWVSQYSNANLIKTDFFEAKSTAYA 342 Query: 118 QGAEL 122 + + + Sbjct: 343 KSSAM 347 >gi|257468678|ref|ZP_05632772.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium ulcerans ATCC 49185] Length = 348 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 9/130 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +I+ ENP + E + +M +A EI + + + +G+ Sbjct: 220 RDELSHVVIFQHLLKEIRNENPDFFNDE---EIYSMFRKAVEQEINWTNHIIGNQILGIT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116 + EQY +++AN R IGL+P+++ + +NP+ +++ D + E NFFE VT Y Sbjct: 277 EETTEQYTKWLANERLRSIGLKPIYEGFNKNPYKHLTKFADTEGEGNVKANFFEGTVTSY 336 Query: 117 QQGAELK-WD 125 + + WD Sbjct: 337 NMSSSIDGWD 346 >gi|330921941|ref|XP_003299625.1| hypothetical protein PTT_10664 [Pyrenophora teres f. teres 0-1] gi|311326599|gb|EFQ92269.1| hypothetical protein PTT_10664 [Pyrenophora teres f. teres 0-1] Length = 410 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + + + ++ R ++ EA +E + + +P +G+N Sbjct: 267 RDEGMHTDFACLLFSLLN-------NRPSKESVRAIITEAVEIEQEFLSDALPCALLGMN 319 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G ++ T NPF +M E I L + NFFE RV +YQ+ Sbjct: 320 ATLMCQYIEFVADRLLLALGNTKVYNAT-NPFDFM-ENISLAGKTNFFEKRVGDYQKAG 376 >gi|241951066|ref|XP_002418255.1| ribonucleoside-diphosphate reductase small chain 1, putative; ribonucleotide reductase r2 subunit 1, putative; ribonucleotide reductase small subunit 1, putative [Candida dubliniensis CD36] gi|223641594|emb|CAX43555.1| ribonucleoside-diphosphate reductase small chain 1, putative [Candida dubliniensis CD36] Length = 413 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL + + ++ EA +E Y + +P +G+N Sbjct: 285 RDEGLHTDFACLLF-------AHLQNRPSPEIVEKIITEAVDVEKEYFTDALPVSLLGMN 337 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R +G + ++ T NPF +M E I L + NFFE RV++YQ+ Sbjct: 338 CNLMCQYIEFVADRLLLALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 394 >gi|68481406|ref|XP_715342.1| hypothetical protein CaO19.5801 [Candida albicans SC5314] gi|68481537|ref|XP_715277.1| hypothetical protein CaO19.13223 [Candida albicans SC5314] gi|46436893|gb|EAK96248.1| hypothetical protein CaO19.13223 [Candida albicans SC5314] gi|46436961|gb|EAK96315.1| hypothetical protein CaO19.5801 [Candida albicans SC5314] gi|238882096|gb|EEQ45734.1| ribonucleoside-diphosphate reductase small chain 1 [Candida albicans WO-1] Length = 413 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL + + ++ EA +E Y + +P +G+N Sbjct: 285 RDEGLHTDFACLLF-------AHLQNRPSPEIVERIITEAVDVEKEYFTDALPVSLLGMN 337 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R +G + ++ T NPF +M E I L + NFFE RV++YQ+ Sbjct: 338 CNLMCQYIEFVADRLLLALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 394 >gi|325831705|ref|ZP_08164922.1| ribonucleoside-diphosphate reductase, beta subunit [Eggerthella sp. HGA1] gi|325486576|gb|EGC89025.1| ribonucleoside-diphosphate reductase, beta subunit [Eggerthella sp. HGA1] Length = 347 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +++ ++K E P L+T E ++ R M+ E EI + H + GLN Sbjct: 219 RDENTHLWLFRNILLELKEEEPELFTPELVEEYRAMIKEGCEQEIRWGHYAIGDEVAGLN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y+Q++ N RC Q+G EPL++ E W+S+ + K +FFE R T Y Sbjct: 279 KQMVTDYIQYLGNLRCTQLGFEPLYEGHEREPESMSWVSQFSNANMIKTDFFEARSTAYA 338 Query: 118 QGAEL 122 + + L Sbjct: 339 KSSAL 343 >gi|312216546|emb|CBX96496.1| similar to ribonucleoside-diphosphate reductase subunit M2 [Leptosphaeria maculans] Length = 410 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + + T+ ++ + ++ EA +E + + +P +G+N Sbjct: 266 RDEGMHTDFACLLFSLLN-------TRPSKESVQAIITEAVEIEKEFLSDALPCALLGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G + T NPF +M E I L + NFFE RV +YQ+ Sbjct: 319 ATLMCQYIEFVADRLLLSLGNTKFYNAT-NPFDFM-ENISLAGKTNFFEKRVGDYQKAG 375 >gi|215401283|ref|YP_002332587.1| ribonucleotide reductase small subunit [Helicoverpa armigera multiple nucleopolyhedrovirus] gi|198448783|gb|ACH88573.1| ribonucleotide reductase small subunit [Helicoverpa armigera multiple nucleopolyhedrovirus] Length = 313 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 8/116 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F N + K + M EA +E + + +P +G+N Sbjct: 191 RDEGMHTDFAC------LYYNTRVNEKLSYETILDMFKEAVDIEKEFFTDALPVALLGMN 244 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 A +Y++F+A+R Q+G +P + NPFP+M+ I L+ + NFFE RV EY+ Sbjct: 245 ADMMCEYIEFVADRLLLQLG-QPKYYNARNPFPFMNN-ISLEGKTNFFERRVGEYK 298 >gi|22549454|ref|NP_689227.1| putative ribonucleotide reductase small subunit-like protein [Mamestra configurata NPV-B] gi|22476633|gb|AAM95039.1| putative ribonucleotide reductase small subunit-like protein [Mamestra configurata NPV-B] Length = 313 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 8/116 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F N + K + M EA +E + + +P +G+N Sbjct: 191 RDEGMHTDFAC------LYYNTRVNEKLSYETILDMFKEAVDIEKEFFTDALPVALLGMN 244 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 A +Y++F+A+R Q+G +P + NPFP+M+ I L+ + NFFE RV EY+ Sbjct: 245 ADMMCEYIEFVADRLLLQLG-QPKYYNARNPFPFMNN-ISLEGKTNFFERRVGEYK 298 >gi|254796877|ref|YP_003081714.1| ribonucleoside-diphosphate reductase, beta subunit [Neorickettsia risticii str. Illinois] gi|254590113|gb|ACT69475.1| ribonucleoside-diphosphate reductase, beta subunit [Neorickettsia risticii str. Illinois] Length = 286 Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 9/130 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTK---EFQQKSRTMLH-EATLLEIAYAHETMPKG 56 +RDE+LH N + +EN K E ++ M+H E +++A+ + Sbjct: 153 VRDETLHSNSITKLFRTFLLENDIDKLKLEAEIREICDAMVHHEDAFIDLAFEMGDVE-- 210 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 GL A ++Y+++IAN R Q+G +++ NP W+ V++ + NFFE + TEY Sbjct: 211 --GLKASEVKEYIRYIANLRLKQLGFSEIYEQKVNPLLWLEAVLNTVEHTNFFENKATEY 268 Query: 117 QQGA-ELKWD 125 + A + WD Sbjct: 269 SKAATKGTWD 278 >gi|328855581|gb|EGG04707.1| hypothetical protein MELLADRAFT_49061 [Melampsora larici-populina 98AG31] Length = 385 Score = 60.5 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + + ++ +A +E + + +P +G+N Sbjct: 248 RDEGLHTDFACLLFS-------HLERRPHPDTVQAIISQAVEIEKEFLSDALPCKLIGMN 300 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G + + ENPF +M E+I L + NFFE RV++Y + Sbjct: 301 ADLMCQYIEFVADRLLVALGNDKFYN-AENPFDFM-EMISLSGKTNFFEKRVSDYAKAG 357 >gi|239826135|ref|YP_002948759.1| ribonucleoside-diphosphate reductase [Geobacillus sp. WCH70] gi|239806428|gb|ACS23493.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. WCH70] Length = 346 Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H++ + ++ E P T E Q R +A LEI +A+ + G++ Sbjct: 218 RDEHIHVDLFAKIFKEVLNEYPEYNTPELAQFVRETFIKAAKLEIEWANYIIGNDIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEKNFFETRVTEYQQ 118 Y++F AN R HQ+G + P Y NP W+ E +DL K +FFE + +Y + Sbjct: 278 MHDLSAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGK-SDFFEQKSRQYTK 336 >gi|320164906|gb|EFW41805.1| ribonucleotide reductase m2 polypeptide [Capsaspora owczarzaki ATCC 30864] Length = 352 Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + + ++ +A +E + + +P +G+N Sbjct: 227 RDEGLHCDFACMLFGLLN-------NRPSNADVLAIIKDAVAIEQEFLTDALPVALIGMN 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + Y++F+A+R +G E +K ENPF +M ++I L+ + NFFE RV EYQ+ Sbjct: 280 GGLMKTYIEFVADRLLVALGQEKHYK-VENPFDFM-DLISLQGKTNFFERRVGEYQK 334 >gi|300706309|ref|XP_002995432.1| hypothetical protein NCER_101672 [Nosema ceranae BRL01] gi|239604534|gb|EEQ81761.1| hypothetical protein NCER_101672 [Nosema ceranae BRL01] Length = 325 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 13/119 (10%) Query: 2 RDESLHLNFGIDVINQIKI-ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 RDE LH +F ++NQ I ++PH+ ++ EA +E + ++P +G+ Sbjct: 202 RDEGLHCDFAC-LLNQYLINKSPHI---------LDIVKEAVEIEKEFLGVSLPVNLIGM 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 N QY++F+A+R +GLE + T NPF +M E I L + NFF+ R ++YQ+ Sbjct: 252 NCKLMCQYIEFVADRLLINLGLEKYYN-TLNPFDFM-ENISLVGKTNFFDKRESQYQKA 308 >gi|322795965|gb|EFZ18591.1| hypothetical protein SINV_11129 [Solenopsis invicta] Length = 426 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 64/117 (54%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + I I+ P + ++++ +A +E + + +P +G+N Sbjct: 296 RDEGLHCDFACLIFKHI-IQKPSF------EHVKSIIMDAVEIEKEFLTQALPVELIGMN 348 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 Y++F+A+R +G E ++ +ENPF +M+ I L+ + NFFE +V EY++ Sbjct: 349 CSLMCNYIEFVADRLFVALGFEKVYN-SENPFSFMN-FISLEGKTNFFEKKVGEYKK 403 >gi|189199548|ref|XP_001936111.1| ribonucleoside-diphosphate reductase subunit M2 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187983210|gb|EDU48698.1| ribonucleoside-diphosphate reductase subunit M2 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 410 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + + + ++ R ++ EA +E + + +P +G+N Sbjct: 267 RDEGMHTDFACLLFSLLN-------NRPSNEEVRAIITEAVEIEQEFLSDALPCALLGMN 319 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G ++ T NPF +M E I L + NFFE RV +YQ+ Sbjct: 320 ATLMCQYIEFVADRLLLALGNTKVYNAT-NPFDFM-ENISLAGKTNFFEKRVGDYQKAG 376 >gi|328700093|ref|XP_001944536.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like [Acyrthosiphon pisum] Length = 361 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K Q ++ EA +E + +P VG++ Sbjct: 233 RDEGLHTDFACLLFK-------HLEQKPPQAVITHIICEAVTIEQDFLTNALPVRMVGMS 285 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 Y++F+A+R +++G +++ + NPFP+M ++I + + NFFE RV +YQ+ + Sbjct: 286 CEKMAVYIEFVADRLLNELGCPTVYR-SSNPFPFM-DLISQQGKTNFFEKRVGDYQKAS 342 >gi|302843870|ref|XP_002953476.1| hypothetical protein VOLCADRAFT_109884 [Volvox carteri f. nagariensis] gi|300261235|gb|EFJ45449.1| hypothetical protein VOLCADRAFT_109884 [Volvox carteri f. nagariensis] Length = 400 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 65/120 (54%), Gaps = 11/120 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQ-KSRTMLHEATLLEIAYAHETMPKGFVGL 60 RDE LH +F + + +K+ ++ + + ++ EA +E + + +P +G+ Sbjct: 273 RDEGLHCDFACLLYGML--------SKQLEESRIKEIICEAVDIENEFCTDALPVDLIGM 324 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 N+ QY++F+A+R +G + T NPF +M ++I L+ + NFFE RV +YQ+ Sbjct: 325 NSRLMAQYIEFVADRLLVALGCSKAYNVT-NPFDFM-DMISLQGKTNFFEKRVGDYQKSG 382 >gi|154149104|ref|YP_001405803.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter hominis ATCC BAA-381] gi|153805113|gb|ABS52120.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter hominis ATCC BAA-381] Length = 340 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+ + K M +A LEI + +GL Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFNDKNIAKIYEMFEKAGELEIKWGKYITQNQIMGLT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 E+Y+ ++ + R IGL + +P W+ + +K NFFE++VT Y +G+ Sbjct: 276 DEIIEEYIHYLVDNRLSAIGLNKKYN-ARHPIKWVDDFAKFNDQKSNFFESKVTNYSKGS 334 >gi|157869457|ref|XP_001683280.1| ribonucleoside-diphosphate reductase small chain [Leishmania major strain Friedlin] gi|68224164|emb|CAJ04657.1| putative ribonucleoside-diphosphate reductase small chain [Leishmania major strain Friedlin] Length = 392 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N Sbjct: 265 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G E + T+ PF +M E+I L+ + NFFE +V EYQ+ Sbjct: 319 AELMAQYIEFVADRLLVSLGEEKHYHSTQ-PFEFM-EMISLQGKTNFFERKVGEYQKAG 375 >gi|15613065|ref|NP_241368.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus halodurans C-125] gi|14195134|sp|Q9KFH7|RIR2_BACHD RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit gi|10173115|dbj|BAB04221.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus halodurans C-125] Length = 345 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 2/119 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH+ ++ ++ +E P L T+E + +T L +A LE + + G+N Sbjct: 217 RDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLMKAADLEKDWFRYIIGDKIPGIN 276 Query: 62 APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118 E Y+ FIAN+R Q+G+E P + NP W+ D+ K +FFE + +Y + Sbjct: 277 PEDMETYISFIANKRAVQLGMEKPYPEIKHNPMKWIRAYEDVNSGKSDFFEQKSRQYAK 335 >gi|153952438|ref|YP_001397460.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter jejuni subsp. doylei 269.97] gi|152939884|gb|ABS44625.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni subsp. doylei 269.97] Length = 340 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN + E P L+ E K M +A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVHKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 E+Y+ ++ ++R I L+ L+ ++P W+ + +K NFFE++VT Y +G+ Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334 >gi|167648664|ref|YP_001686327.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter sp. K31] gi|167351094|gb|ABZ73829.1| Ribonucleoside-diphosphate reductase [Caulobacter sp. K31] Length = 346 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 2/121 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDESLH I + + E + T E ++E A+ G + G Sbjct: 197 IRDESLHCEGIIKLYHAFNAETKCV-TPEVAADIVECCKSVVIMEDAFIDLAFEAGEIQG 255 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + +QY++FIA+ R Q+ L ++ ENP PW+ ++ + NFFE R TEY + Sbjct: 256 MTPHDIKQYIRFIADWRLRQLHLPEVYGIKENPLPWLQSLLSGVEHANFFEARATEYSKA 315 Query: 120 A 120 A Sbjct: 316 A 316 >gi|83859670|ref|ZP_00953190.1| ribonucleotide-diphosphate reductase beta subunit [Oceanicaulis alexandrii HTCC2633] gi|83852029|gb|EAP89883.1| ribonucleotide-diphosphate reductase beta subunit [Oceanicaulis alexandrii HTCC2633] Length = 348 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 2/121 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDESLH + + + E L TK + LE + G V G Sbjct: 197 VRDESLHCEGMMKLFHTFAEETGAL-TKGVKDDIADCCKTVVSLEDKFIELAFEAGEVEG 255 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + + Y+++IA+ R Q+ L ++ E+P PW++E+++ + NFFE R TEY +G Sbjct: 256 MTPEDIKNYIRYIADWRMKQLKLPTIYGVEEHPIPWLTEILNGVEHANFFEARATEYSKG 315 Query: 120 A 120 A Sbjct: 316 A 316 >gi|224372455|ref|YP_002606827.1| ribonucleotide-diphosphate reductase subunit beta [Nautilia profundicola AmH] gi|223589410|gb|ACM93146.1| ribonucleoside-diphosphate reductase, beta subunit [Nautilia profundicola AmH] Length = 346 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 3/122 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H ++ +IK E P L+T E + + ML+ A LE + +G++ Sbjct: 219 RDEVTHTLLFANIFKEIKKEFPDLFTPEVIKNIKDMLYAAYELERDWGWYITNDEILGMS 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118 +++ Q++AN+R +GL+ LF +NP W ++K NFFE V Y + Sbjct: 279 KELIDRFTQYLANKRAQAMGLDLLFPEVGLKNPISWFDGFSSFNEQKTNFFEGNVVNYSK 338 Query: 119 GA 120 G+ Sbjct: 339 GS 340 >gi|224007863|ref|XP_002292891.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220971753|gb|EED90087.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 297 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +++ + P + + ++ A +E + + +P +G+N Sbjct: 172 RDEGLHCDFACLLYSKLVNKLP-------ESRITKIITVAVEIEKEFVSDALPVELIGMN 224 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + Y++F A+R +G + T NPF WM E+I L+ + NFFE RV EY + Sbjct: 225 SKLMCDYIEFCADRLLGALGCSKFYNAT-NPFEWM-EMISLQGKTNFFEKRVGEYAKSG 281 >gi|169613737|ref|XP_001800285.1| hypothetical protein SNOG_10001 [Phaeosphaeria nodorum SN15] gi|111061216|gb|EAT82336.1| hypothetical protein SNOG_10001 [Phaeosphaeria nodorum SN15] Length = 409 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + + T+ + + ++ EA +E + E +P +G+N Sbjct: 267 RDEGMHTDFACLLFSLLN-------TRPSKDAVKAIITEAVEIEQEFLTEALPCALLGMN 319 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G ++ T NPF +M E I L + NFFE RV +YQ+ Sbjct: 320 STLMCQYIEFVADRLLLALGNTKVYNAT-NPFDFM-ENISLAGKTNFFEKRVGDYQKAG 376 >gi|256027986|ref|ZP_05441820.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp. D11] Length = 348 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 8/126 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +IK + P+ ++ E +M A EIA+ + +G+ Sbjct: 220 RDELSHVVLFRSIVKEIKNDFPNFFSAE---TVYSMFKTAVEQEIAWTEHIIGNRVLGIT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116 + + E Y +++AN R +GLEPLF + +NP+ + D + E NFFE VT Y Sbjct: 277 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 336 Query: 117 QQGAEL 122 + + Sbjct: 337 NMSSSI 342 >gi|289742419|gb|ADD19957.1| ribonucleotide reductase beta subunit [Glossina morsitans morsitans] Length = 396 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 64/117 (54%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH F + + HL K +++ ++ +A +E + E +P +G+N Sbjct: 271 RDEGLHCEFAVLMFK-------HLIQKPSKERILEIITDAVKIEKEFLTEALPVDLIGMN 323 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + S +Y++++A+R ++ + + ENPF +M++ I + + NFFE RV EYQ+ Sbjct: 324 SESMCKYIEYVADRLLLELDVGKYY-LAENPFEFMNK-ISIDGKTNFFEKRVGEYQK 378 >gi|260497963|ref|ZP_05816079.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium sp. 3_1_33] gi|260196471|gb|EEW94002.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium sp. 3_1_33] Length = 344 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 8/126 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +IK + P+ ++ E +M A EIA+ + +G+ Sbjct: 216 RDELSHVVLFRSIVKEIKNDFPNFFSAE---TVYSMFKTAVEQEIAWTEHIIGNRVLGIT 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116 + + E Y +++AN R +GLEPLF + +NP+ + D + E NFFE VT Y Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332 Query: 117 QQGAEL 122 + + Sbjct: 333 NMSSSI 338 >gi|219126374|ref|XP_002183434.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217405190|gb|EEC45134.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 296 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++++ + P E ++ +A +E + + +P +G+N Sbjct: 172 RDEGLHCDFACLLYSKLQNQLPVARIVE-------IITDAVTIEQEFVQDALPVELIGMN 224 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + +Y++F A+R +G +K NPF WM E+I L+ + NFFE RV EY + Sbjct: 225 STLMCRYIEFCADRLLVALGCPKHYKAV-NPFDWM-EMISLQGKTNFFEKRVGEYAKSG 281 >gi|57505748|ref|ZP_00371674.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter upsaliensis RM3195] gi|57016021|gb|EAL52809.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter upsaliensis RM3195] Length = 340 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+ ++ K +M A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFNEQNIDKIYSMFKRAGELEIKWGKYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 E+Y+ ++ ++R I L+ ++ ++P W+ + +K NFFE++VT Y +G+ Sbjct: 276 DDIIEEYIHYLVDQRLIAINLDKIYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334 >gi|20069937|ref|NP_613141.1| ribonucleotide reductase small subunit [Mamestra configurata NPV-A] gi|20043331|gb|AAM09166.1| ribonucleotide reductase small subunit [Mamestra configurata NPV-A] gi|33331769|gb|AAQ11077.1| putative ribonucleotide reductase small subunit-like protein [Mamestra configurata NPV-A] Length = 313 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 8/116 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F N + K +K M EA +E + + +P +G+N Sbjct: 191 RDEGMHTDFAC------LYYNTRVKEKLSYEKILDMFKEAVDIEKEFFTDALPVSLLGMN 244 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 A +Y++F+A+R Q+G +P + NPF +M+ I L+ + NFFE RV EY+ Sbjct: 245 ATMMCEYIEFVADRLLMQLG-QPKYYNARNPFSFMNN-ISLEGKTNFFERRVGEYK 298 >gi|289765931|ref|ZP_06525309.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium sp. D11] gi|289717486|gb|EFD81498.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium sp. D11] Length = 344 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 8/126 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +IK + P+ ++ E +M A EIA+ + +G+ Sbjct: 216 RDELSHVVLFRSIVKEIKNDFPNFFSAE---TVYSMFKTAVEQEIAWTEHIIGNRVLGIT 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116 + + E Y +++AN R +GLEPLF + +NP+ + D + E NFFE VT Y Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332 Query: 117 QQGAEL 122 + + Sbjct: 333 NMSSSI 338 >gi|88608725|ref|YP_506404.1| ribonucleotide-diphosphate reductase subunit beta [Neorickettsia sennetsu str. Miyayama] gi|88600894|gb|ABD46362.1| ribonucleoside-diphosphate reductase, beta subunit [Neorickettsia sennetsu str. Miyayama] Length = 322 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 9/130 (6%) Query: 1 MRDESLHLNFGIDVINQIKIEN---PHLWTKEFQQKSRTMLH-EATLLEIAYAHETMPKG 56 +RDE+LH N + +EN E ++ M+H E +++A+ + Sbjct: 189 VRDETLHSNSITKLFRTFLLENNIDKFKLEAEIREICNAMVHHEDAFIDLAFEMGDVE-- 246 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 GL A ++Y+++IAN R Q+G +++ NP W+ V++ + NFFE + TEY Sbjct: 247 --GLKASEVKEYIRYIANLRLKQLGFSEIYEQKVNPLLWLEAVLNTVEHTNFFENKATEY 304 Query: 117 QQGA-ELKWD 125 + A + WD Sbjct: 305 SKAATKGTWD 314 >gi|223996990|ref|XP_002288168.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220975276|gb|EED93604.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 335 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +++ + P + + ++ A +E + + +P +G+N Sbjct: 210 RDEGLHCDFACLIYSKLVNQLP-------ESRIEEIITNAVEIEKEFVSDALPVELIGMN 262 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F A+R +G + + NPF WM E+I L+ + NFFE RV EY + Sbjct: 263 SKLMCQYIEFCADRLLGALGCKKHYMAV-NPFEWM-EMISLQGKTNFFEKRVGEYAKSG 319 >gi|168049349|ref|XP_001777126.1| predicted protein [Physcomitrella patens subsp. patens] gi|162671569|gb|EDQ58119.1| predicted protein [Physcomitrella patens subsp. patens] Length = 325 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + K + + ++ EA +E + E + VG+N Sbjct: 197 RDEGLHCDFACLLYTLLN-------NKLSEDRVHEIVCEAVDIEREFVCEALSCDLVGMN 249 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +Y+ F+A+R +G + NPF WM E+I L+ + NFFE RV EYQ+ + Sbjct: 250 KIMMSEYIDFVADRLLVSLGYNKRYN-ARNPFDWM-ELISLQGKTNFFEKRVGEYQKAS 306 >gi|257792030|ref|YP_003182636.1| ribonucleotide-diphosphate reductase subunit beta [Eggerthella lenta DSM 2243] gi|317488666|ref|ZP_07947206.1| ribonucleotide reductase [Eggerthella sp. 1_3_56FAA] gi|257475927|gb|ACV56247.1| Ribonucleoside-diphosphate reductase [Eggerthella lenta DSM 2243] gi|316912225|gb|EFV33794.1| ribonucleotide reductase [Eggerthella sp. 1_3_56FAA] Length = 347 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +++ ++K E P L+ E ++ R M+ E EI + H + GLN Sbjct: 219 RDENTHLWLFRNILLELKEEEPELFAPELVEEYRAMIKEGCEQEIRWGHYAIGDDVAGLN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y+Q++ N RC Q+G EPL++ E W+S+ + K +FFE R T Y Sbjct: 279 KQMVTDYIQYLGNLRCAQLGFEPLYEGHEREPESMSWVSQFSNANMIKTDFFEARSTAYA 338 Query: 118 QGAEL 122 + + L Sbjct: 339 KSSAL 343 >gi|295401051|ref|ZP_06811025.1| Ribonucleoside-diphosphate reductase [Geobacillus thermoglucosidasius C56-YS93] gi|312112173|ref|YP_003990489.1| ribonucleotide reductase [Geobacillus sp. Y4.1MC1] gi|294976844|gb|EFG52448.1| Ribonucleoside-diphosphate reductase [Geobacillus thermoglucosidasius C56-YS93] gi|311217274|gb|ADP75878.1| ribonucleotide reductase [Geobacillus sp. Y4.1MC1] Length = 346 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H++ + ++ E P T E + + +A LEI +A+ + G++ Sbjct: 218 RDEHIHVDLFAKIFKEVLSEYPEYNTPELAEFVQATFTKAAELEIEWANYIIGNDIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEKNFFETRVTEYQQ 118 Y++F AN R HQ+G E P Y NP W+ E +DL K +FFE + +Y + Sbjct: 278 MHDLSAYIKFYANVRAHQLGFERPFAGYRTNPLRWIKAYEEVDLGK-SDFFEQKSRQYTK 336 >gi|40556174|ref|NP_955259.1| CNPV236 ribonucleotide reductase small subunit [Canarypox virus] gi|40233999|gb|AAR83582.1| CNPV236 ribonucleotide reductase small subunit [Canarypox virus] Length = 323 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 8/117 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K Q + ++ A +E + E + +G+N Sbjct: 197 RDEGLHCDFACLLFTN------YLSHKPSQDRVYEIIDSAVSVETEFLTEALSIDLIGMN 250 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + S +Y++F+++R +G + ENPF +M E I L+ + NFFE RV+ YQ+ Sbjct: 251 SKSMIEYIKFVSDRLLVSLGFSKKYN-VENPFSFM-ENISLEGKANFFEKRVSNYQK 305 >gi|56555145|gb|AAV98100.1| RR2 protein [Shrimp white spot syndrome virus] Length = 328 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 8/111 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F ++ + ++ P +++ ++ EA +E + ++P VG+N Sbjct: 226 RDEGLHRDFACMLLKKGFVDTPS------RERILEIVTEAVRIEQEFLTVSLPVKLVGMN 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 112 QY++F+A++ ++GLE + T NPFP+M I L+ + NFFE R Sbjct: 280 CKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMDN-ISLENKTNFFEKR 328 >gi|291239432|ref|XP_002739627.1| PREDICTED: hCG23833-like [Saccoglossus kowalevskii] Length = 309 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH F + +IK P K R ++ E +E + + K +G+N Sbjct: 190 RDEGLHCTFACTMYGKIKPRLP-------DTKVRKIVLEGCEVEKLFVKHALRKPLLGMN 242 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + E Y+ F+ + +G E F NPFP+M I ++ + NFFE RVTEY + Sbjct: 243 SHLMETYVNFVTDNLLTDLGYEKEFG-VNNPFPFMDN-ISMQGKTNFFERRVTEYTR 297 >gi|15617531|ref|NP_258331.1| RR2B [Spodoptera litura NPV] gi|15553267|gb|AAL01745.1|AF325155_57 ribonucleotide reductase small subunit homolog [Spodoptera litura NPV] Length = 333 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 64/117 (54%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K + + ++ EA +E + E +P +G+N Sbjct: 206 RDEGLHTDFAC-------LMYSHIVNKPTRDRILDIITEAVAIENEFVTEALPVAMLGMN 258 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +Y++F+A+R ++ E + T+NPF +M+ +I L+ + NFFE +V+EYQ+ Sbjct: 259 NDLMSKYIEFVADRLLLELIGERHYN-TKNPFDFMN-LISLEGKTNFFEKKVSEYQK 313 >gi|269865627|ref|XP_002651990.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220063361|gb|EED42066.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] Length = 290 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 11/118 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H + ++ EA +E + E++P +G+N Sbjct: 168 RDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMN 218 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 QY++F+A+R +G + ++ + NPF +M E I L+ + NFFE R T YQ+G Sbjct: 219 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERRETNYQKG 274 >gi|119478853|ref|XP_001259462.1| ribonucleotide reductase small subunit RnrA, putative [Neosartorya fischeri NRRL 181] gi|119407616|gb|EAW17565.1| ribonucleotide reductase small subunit RnrA, putative [Neosartorya fischeri NRRL 181] Length = 405 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ ++ EA +E + E +P +G+N Sbjct: 268 RDEGLHTDFACLLFS-------HLNHRPDKKVVEDIIVEAVAIEQEFLTEALPVALLGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G + + + NPF +M E I L + NFFE RV +YQ+ Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYYN-SSNPFDFM-ESISLAGKTNFFEKRVGDYQKAG 377 >gi|315637824|ref|ZP_07893014.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter upsaliensis JV21] gi|315482065|gb|EFU72679.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter upsaliensis JV21] Length = 340 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+ ++ K +M A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFNEQNIDKIYSMFKRAGELEIKWGKYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 E+Y+ ++ ++R I L+ ++ ++P W+ + +K NFFE++VT Y +G+ Sbjct: 276 DDIIEEYIHYLVDQRLIAINLDRIYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334 >gi|268678691|ref|YP_003303122.1| ribonucleoside-diphosphate reductase [Sulfurospirillum deleyianum DSM 6946] gi|268616722|gb|ACZ11087.1| Ribonucleoside-diphosphate reductase [Sulfurospirillum deleyianum DSM 6946] Length = 340 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN K E P L+T + K M +A LEI + +G Sbjct: 216 RDEITHLLLFQNMINTTKKERPDLFTDALKAKVYEMFQKAGDLEIEWGKYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 E Y+ ++ + R +G + L+ +P W+ + +K NFFE V+ Y +G+ Sbjct: 276 DDIIETYIHYLVDDRLTAVGFDKLYN-ASHPIKWVDDFSKFNDQKTNFFEGNVSNYSKGS 334 >gi|51869996|ref|YP_073549.1| Ribonucleotide reductase [Lymphocystis disease virus - isolate China] gi|51858204|gb|AAU10888.1| Ribonucleotide reductase [Lymphocystis disease virus - isolate China] Length = 374 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 2/121 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET-MPKGFVG 59 +RDE++H+ + I E P + TK+F + T+ E LE A+ + Sbjct: 250 IRDENVHVEGLCKLFKTIVSEYPFILTKDFYKAVETLQQEVLKLETAFVDLVFIEDKLKN 309 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L Y+++I RR Q+GL +NP W+S +I + NFFE RVTEY G Sbjct: 310 LKRVDVINYVKYILQRRTVQLGLSNKTD-LQNPILWVSWLISGRDVTNFFENRVTEYDVG 368 Query: 120 A 120 Sbjct: 369 G 369 >gi|42525851|ref|NP_970949.1| ribonucleotide-diphosphate reductase subunit beta [Treponema denticola ATCC 35405] gi|41815901|gb|AAS10830.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema denticola ATCC 35405] Length = 351 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +++ E P L+T + + R M+ E EIA+ + GLN Sbjct: 223 RDENTHLWLFRSMIQELQKEEPQLFTPQNVELFRAMIKEGCEQEIAWGDYVIGNDIPGLN 282 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 + Y+Q++ N RC +G P++ + E P W S+ + K +FFE + T Y Sbjct: 283 SQMITDYIQYLGNLRCENLGFAPIYDGHREEPQSMSWASQYSNANLIKTDFFEAKSTAYA 342 Query: 118 QGAEL 122 + + + Sbjct: 343 KSSAM 347 >gi|253582918|ref|ZP_04860136.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium varium ATCC 27725] gi|251835124|gb|EES63667.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium varium ATCC 27725] Length = 348 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 9/130 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +I+ ENP + E + M +A EI + + + +G+ Sbjct: 220 RDELSHVVIFQHLLKEIRNENPDFFNDE---EIYDMFRKAVEQEINWTNHIIGNQILGIT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116 + EQY +++AN R IGL+P++ + +NP+ +++ D + E NFFE VT Y Sbjct: 277 EETTEQYTKWLANERLRSIGLKPIYDGFNKNPYKHLTKFADTEGEGNVKANFFEGTVTSY 336 Query: 117 QQGAELK-WD 125 + + WD Sbjct: 337 NMSSSIDGWD 346 >gi|297736972|emb|CBI26173.3| unnamed protein product [Vitis vinifera] Length = 312 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 9/105 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ + P W QK ++HEA +E + E +P +G+N Sbjct: 171 RDEGLHCDFACLLYSLLQKQLP--W-----QKVHHIVHEAVEIETQFVCEALPCALIGMN 223 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK 106 A QY++F+A+R +G E + ENPF WM E I L+ + Sbjct: 224 ATLMSQYIKFVADRLLVALGYERKYN-VENPFDWM-EFISLQCSR 266 >gi|290343623|ref|YP_003494990.1| hypothetical protein OTV1_151 [Ostreococcus tauri virus 1] gi|260161038|emb|CAY39739.1| hypothetical protein OTV1_151 [Ostreococcus tauri virus 1] Length = 389 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 63/117 (53%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH F +++ ++ P + T ++ EA +E + + +P +G+N Sbjct: 268 RDEGLHQEFAVELFKTLR-NRPGVDT------IHAIVREAVDIEKGFILDALPCNLIGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + +Y++++++R QIG+ P ++NPF +M E I L + NFFE RV +Y + Sbjct: 321 SEKMSEYIEYVSDRLLKQIGV-PTIWNSKNPFDFM-ENISLDGKTNFFEKRVGDYGK 375 >gi|257458932|ref|ZP_05624052.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter gracilis RM3268] gi|257443636|gb|EEV18759.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter gracilis RM3268] Length = 340 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+ K K M A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRKERADLFNKRNVDKIYEMFETAGNLEIDWGKYITDNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 E+Y+ ++ ++R IGLE + ++P W+ + +K NFFE++VT Y +G+ Sbjct: 276 DDIIEEYIHYLVDQRLLAIGLEKRYD-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334 >gi|163955147|ref|YP_001648251.1| hypothetical protein OsV5_174r [Ostreococcus virus OsV5] gi|163638596|gb|ABY27955.1| hypothetical protein OsV5_174r [Ostreococcus virus OsV5] Length = 322 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 63/117 (53%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH F +++ ++ P + T ++ EA +E + + +P +G+N Sbjct: 201 RDEGLHQEFAVELFKTLR-NRPGVDT------IHAIVREAVEIEKGFILDALPCNLIGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + +Y++++++R QIG+ P ++NPF +M E I L + NFFE RV +Y + Sbjct: 254 SEKMSEYIEYVSDRLLKQIGV-PTIWNSKNPFDFM-ENISLDGKTNFFEKRVGDYGK 308 >gi|327298815|ref|XP_003234101.1| ribonucleotide reductase small subunit RnrA [Trichophyton rubrum CBS 118892] gi|326464279|gb|EGD89732.1| ribonucleotide reductase small subunit RnrA [Trichophyton rubrum CBS 118892] Length = 408 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ EA +E + + +P +G+N Sbjct: 272 RDEGLHTDFACLLFS-------HLNYRPDPSAVEAIITEAVTIEQEFLTDALPCALLGMN 324 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G + + T NPF +M I L + NFFE RV +YQ+ Sbjct: 325 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 381 >gi|155122339|gb|ABT14207.1| hypothetical protein MT325_M653L [Paramecium bursaria chlorella virus MT325] Length = 326 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH FG + + K+EN K + + ++ EA E + E +P +G+N Sbjct: 202 RDEGLHQQFGELLYS--KLEN-----KLSLAQVKAIVEEAVANEKEFICEAIPCRMIGMN 254 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + QY++F+A+R +G + T NPF +M E+I L+ + NFFE RV+EYQ+ Sbjct: 255 SELMGQYLEFVADRIFVALGHPKQYNAT-NPFDFM-ELISLEGKSNFFERRVSEYQR 309 >gi|155370749|ref|YP_001426283.1| hypothetical protein FR483_N651L [Paramecium bursaria Chlorella virus FR483] gi|155124069|gb|ABT15936.1| hypothetical protein FR483_N651L [Paramecium bursaria Chlorella virus FR483] Length = 348 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH FG + + K+EN K + + ++ EA E + E +P +G+N Sbjct: 224 RDEGLHQQFGELLYS--KLEN-----KLSLAQVKAIVEEAVANEKEFICEAIPCRMIGMN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + QY++F+A+R +G + T NPF +M E+I L+ + NFFE RV+EYQ+ Sbjct: 277 SELMGQYLEFVADRIFVALGHPKQYNAT-NPFDFM-ELISLEGKSNFFERRVSEYQR 331 >gi|302497417|ref|XP_003010709.1| hypothetical protein ARB_03411 [Arthroderma benhamiae CBS 112371] gi|291174252|gb|EFE30069.1| hypothetical protein ARB_03411 [Arthroderma benhamiae CBS 112371] Length = 408 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ EA +E + + +P +G+N Sbjct: 272 RDEGLHTDFACLLFS-------HLNYRPDPSAVEAIITEAVTIEQEFLTDALPCALLGMN 324 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G + + T NPF +M I L + NFFE RV +YQ+ Sbjct: 325 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 381 >gi|225386408|ref|ZP_03756172.1| hypothetical protein CLOSTASPAR_00155 [Clostridium asparagiforme DSM 15981] gi|225047489|gb|EEG57735.1| hypothetical protein CLOSTASPAR_00155 [Clostridium asparagiforme DSM 15981] Length = 347 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L++ E + + M+ E EIA+ H + GL Sbjct: 219 RDENTHLWLLRNMILELKKEEPQLFSPETVEMLKAMVEEGVEQEIAWGHYVIGDRISGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 +Y++++ N R +G EPL++ Y E P W+ + + K +FFE + T Y Sbjct: 279 REMVTEYIRYLGNLRWTSLGFEPLYEGYEEEPESMKWVGQYSNANMVKTDFFEAKSTAYA 338 Query: 118 QGAEL 122 + L Sbjct: 339 KSTAL 343 >gi|326472581|gb|EGD96590.1| ribonucleotide reductase small subunit RnrA [Trichophyton tonsurans CBS 112818] Length = 408 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ EA +E + + +P +G+N Sbjct: 272 RDEGLHTDFACLLFS-------HLNYRPDPNAVEAIITEAVTIEQEFLTDALPCALLGMN 324 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G + + T NPF +M I L + NFFE RV +YQ+ Sbjct: 325 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 381 >gi|302381236|ref|YP_003817059.1| ribonucleoside-diphosphate reductase [Brevundimonas subvibrioides ATCC 15264] gi|302191864|gb|ADK99435.1| Ribonucleoside-diphosphate reductase [Brevundimonas subvibrioides ATCC 15264] Length = 348 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 2/121 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDESLH + I + + E + TK LE + G + G Sbjct: 200 VRDESLHCDGIIKLYHAFNKETGVV-TKAVADDIVQCCETVVGLEDKFIDLAFEAGEING 258 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + +QY++FIA+ R Q+ L L+ ENP PW+ ++ + NFFE R TEY + Sbjct: 259 MTPEDIKQYIRFIADWRLRQLKLPELYGVKENPLPWLQSLLSGVEHANFFEARATEYSKA 318 Query: 120 A 120 A Sbjct: 319 A 319 >gi|282598964|ref|YP_003358881.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Deftia phage phiW-14] gi|257219034|gb|ACV50049.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Deftia phage phiW-14] Length = 346 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 7/131 (5%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE +H+ + ++ E+P L T E +++ + E + K + + Sbjct: 205 LRDEGIHVEGSSLLYRKVMGEHPWLMTDEHKKQVYDLARAVVAAEDLFLDLAFKKYQLTM 264 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI---DLKKEKNFFETRVTEYQ 117 + Y++++ NRR Q+G + +F+ P PW+ E++ K++ NFFETRV YQ Sbjct: 265 TKDESKAYVRYMMNRRLLQLGHKAIFEVQGIPCPWIEEILGGAGGKRDSNFFETRVDNYQ 324 Query: 118 -QGA---ELKW 124 GA EL W Sbjct: 325 ASGALVGELDW 335 >gi|168031987|ref|XP_001768501.1| predicted protein [Physcomitrella patens subsp. patens] gi|162680214|gb|EDQ66652.1| predicted protein [Physcomitrella patens subsp. patens] Length = 331 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 11/120 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + L K +++ ++ EA +E + E + VG+N Sbjct: 201 RDEGLHCDFAC-------LLYTLLINKLSEERVYEIVCEAVEIEREFVCEALSCDLVGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +Y+ F+A+R +G KY NPF WM E+I L+ + NFFE RV EYQ+ + Sbjct: 254 KILMSEYIDFVADRLLVSLGYRK--KYNALNPFDWM-ELISLQGKTNFFEKRVGEYQKAS 310 >gi|237738278|ref|ZP_04568759.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium mortiferum ATCC 9817] gi|229420158|gb|EEO35205.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium mortiferum ATCC 9817] Length = 348 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 9/130 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I +++ ENP+ + + + M +A EI++ + + +G+ Sbjct: 220 RDELSHVVIFQQMIKEVQNENPNFFDENIIYE---MFEKAVEQEISWTNHIIGGNILGIT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116 + E Y +++AN R IGL+PL++ Y +NP+ + D + E NFFE VT Y Sbjct: 277 EKTTESYTKWLANERLKSIGLQPLYEGYEKNPYKHLERFADTEGEGNVKANFFEGTVTSY 336 Query: 117 QQGAELK-WD 125 + ++ WD Sbjct: 337 NMSSSVEGWD 346 >gi|119174781|ref|XP_001239725.1| hypothetical protein CIMG_09346 [Coccidioides immitis RS] Length = 408 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + + + ++ EA +E + + +P +G+N Sbjct: 272 RDEGLHTDFACLLFS-------HLRHRPGPEAVQAIITEAVEIEKEFLTDALPCALLGMN 324 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G + + T NPF +M I L + NFFE RV +YQ+ Sbjct: 325 SKLMCQYIEFVADRLLVALGNKKFYNAT-NPFDFMDN-ISLSGKTNFFEKRVGDYQKAG 381 >gi|315041979|ref|XP_003170366.1| ribonucleoside-diphosphate reductase small subunit [Arthroderma gypseum CBS 118893] gi|311345400|gb|EFR04603.1| ribonucleoside-diphosphate reductase small subunit [Arthroderma gypseum CBS 118893] Length = 408 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ EA +E + + +P +G+N Sbjct: 272 RDEGLHTDFACLLFS-------HLNHRPEPSAVEAIITEAVTIEQEFLTDALPCALLGMN 324 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G + + T NPF +M I L + NFFE RV +YQ+ Sbjct: 325 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 381 >gi|302665732|ref|XP_003024474.1| hypothetical protein TRV_01368 [Trichophyton verrucosum HKI 0517] gi|291188529|gb|EFE43863.1| hypothetical protein TRV_01368 [Trichophyton verrucosum HKI 0517] Length = 529 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ EA +E + + +P +G+N Sbjct: 393 RDEGLHTDFACLLFS-------HLNYRPDPSAVEAIITEAVTIEQEFLTDALPCALLGMN 445 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G + + T NPF +M I L + NFFE RV +YQ+ Sbjct: 446 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 502 >gi|303314521|ref|XP_003067269.1| ribonucleoside-diphosphate reductase small chain, putative [Coccidioides posadasii C735 delta SOWgp] gi|240106937|gb|EER25124.1| ribonucleoside-diphosphate reductase small chain, putative [Coccidioides posadasii C735 delta SOWgp] gi|320037571|gb|EFW19508.1| ribonucleoside-diphosphate reductase small subunit [Coccidioides posadasii str. Silveira] Length = 408 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + + + ++ EA +E + + +P +G+N Sbjct: 272 RDEGLHTDFACLLFS-------HLRHRPGPEAVQAIITEAVEIEKEFLTDALPCALLGMN 324 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G + + T NPF +M I L + NFFE RV +YQ+ Sbjct: 325 SKLMCQYIEFVADRLLVALGNKKFYNAT-NPFDFMDN-ISLSGKTNFFEKRVGDYQKAG 381 >gi|70997335|ref|XP_753417.1| ribonucleotide reductase small subunit RnrA [Aspergillus fumigatus Af293] gi|66851053|gb|EAL91379.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus fumigatus Af293] gi|159126856|gb|EDP51972.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus fumigatus A1163] Length = 405 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ ++ EA +E + + +P +G+N Sbjct: 268 RDEGLHTDFACLLFS-------HLNHRPDKKVIEDIIVEAVAIEQEFLTDALPVALLGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G + F + NPF +M E I L + NFFE RV +YQ+ Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYFN-SPNPFDFM-ESISLAGKTNFFEKRVGDYQKAG 377 >gi|167748341|ref|ZP_02420468.1| hypothetical protein ANACAC_03085 [Anaerostipes caccae DSM 14662] gi|167652333|gb|EDR96462.1| hypothetical protein ANACAC_03085 [Anaerostipes caccae DSM 14662] Length = 358 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +++ ++K E P L+ + R M+ + EI + H + GL Sbjct: 230 RDENTHLWLFKNILLELKKEEPSLFHPDCINDYRRMIKKGCEQEIRWGHYVIGDEIQGLK 289 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117 E+Y++++ N RC +G EP++ +E W+S+ + K +FFE + T Y Sbjct: 290 KEMVEEYIRYLGNLRCQNLGFEPIYPGSETEPESMSWVSQFSNANMIKTDFFEAKSTAYA 349 Query: 118 QGAEL 122 + + L Sbjct: 350 KSSAL 354 >gi|317472120|ref|ZP_07931452.1| ribonucleotide reductase [Anaerostipes sp. 3_2_56FAA] gi|316900524|gb|EFV22506.1| ribonucleotide reductase [Anaerostipes sp. 3_2_56FAA] Length = 347 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +++ ++K E P L+ + R M+ + EI + H + GL Sbjct: 219 RDENTHLWLFKNILLELKKEEPSLFHPDCINDYRRMIKKGCEQEIRWGHYVIGDEIQGLK 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117 E+Y++++ N RC +G EP++ +E W+S+ + K +FFE + T Y Sbjct: 279 KEMVEEYIRYLGNLRCQNLGFEPIYPGSETEPESMSWVSQFSNANMIKTDFFEAKSTAYA 338 Query: 118 QGAEL 122 + + L Sbjct: 339 KSSAL 343 >gi|332031690|gb|EGI71130.1| Ribonucleoside-diphosphate reductase subunit M2 [Acromyrmex echinatior] Length = 210 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 67/124 (54%), Gaps = 9/124 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + I ++ P ++ ++++ +A +E + + +P +G+N Sbjct: 81 RDEGLHCDFACLMFKHI-VQKPSF------ERVKSIVMDAVEIEKEFLTQALPVELIGMN 133 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 Y++F+A+R +G E ++ +ENPF +M + I + + NFFE +V EY++ Sbjct: 134 RTFMCNYIEFVADRLFVALGFEKVYN-SENPFSFM-DFISMMGKTNFFEKKVGEYKKFGV 191 Query: 122 LKWD 125 ++ D Sbjct: 192 MEED 195 >gi|57168357|ref|ZP_00367491.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter coli RM2228] gi|305432773|ref|ZP_07401932.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter coli JV20] gi|57020165|gb|EAL56839.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter coli RM2228] gi|304444170|gb|EFM36824.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter coli JV20] Length = 340 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+ + K M +A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFNENNINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 E+Y+ ++ ++R I L+ ++ ++P W+ + +K NFFE++VT Y +G+ Sbjct: 276 DDIIEEYIHYLVDQRLVAINLDKIYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334 >gi|330941351|gb|EGH44203.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. pisi str. 1704B] Length = 317 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 24/26 (92%), Positives = 26/26 (100%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLW 26 +RDES+HLNFGIDVINQIKIENPHLW Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLW 316 >gi|121713826|ref|XP_001274524.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus clavatus NRRL 1] gi|119402677|gb|EAW13098.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus clavatus NRRL 1] Length = 405 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ ++ EA +E + + +P +G+N Sbjct: 268 RDEGLHTDFACLLFS-------HLNNRPDKKVVEDIIVEAVAIEQEFLTDALPVALLGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G + + + NPF +M E I L + NFFE RV +YQ+ Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYYN-SPNPFDFM-ESISLAGKTNFFEKRVGDYQKAG 377 >gi|212533263|ref|XP_002146788.1| ribonucleotide reductase small subunit RnrA, putative [Penicillium marneffei ATCC 18224] gi|210072152|gb|EEA26241.1| ribonucleotide reductase small subunit RnrA, putative [Penicillium marneffei ATCC 18224] Length = 406 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL T+ + ++ +A +E + + +P +G+N Sbjct: 268 RDEGLHTDFACMLFS-------HLNTRPNPKVIEDIIVDAVAIEQEFLTDALPCALLGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G + + T NPF +M E I L + NFFE RV +YQ+ Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYYNAT-NPFDFM-ENISLAGKTNFFEKRVGDYQKAG 377 >gi|169779219|ref|XP_001824074.1| ribonucleoside-diphosphate reductase small chain [Aspergillus oryzae RIB40] gi|238499845|ref|XP_002381157.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus flavus NRRL3357] gi|83772813|dbj|BAE62941.1| unnamed protein product [Aspergillus oryzae] gi|220692910|gb|EED49256.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus flavus NRRL3357] Length = 405 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + Q ++ EA +E + + +P +G+N Sbjct: 269 RDEGLHTDFACLLFS-------HLNNRPDPQIVEDVIVEAVSIEKEFLTDALPCALLGMN 321 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G F T NPF +M I L + NFFE RV +YQ+ Sbjct: 322 SNLMCQYIEFVADRLLVALGNNKYFNAT-NPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 378 >gi|296809816|ref|XP_002845246.1| ribonucleotide reductase [Arthroderma otae CBS 113480] gi|238842634|gb|EEQ32296.1| ribonucleotide reductase [Arthroderma otae CBS 113480] Length = 405 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ EA +E + + +P +G+N Sbjct: 269 RDEGLHTDFACLLFS-------HLNYRPDPTAVEAIITEAVSIEQEFLTDALPCALLGMN 321 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G + + T NPF +M I L + NFFE RV +YQ+ Sbjct: 322 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 378 >gi|294659365|ref|XP_461732.2| DEHA2G04268p [Debaryomyces hansenii CBS767] gi|199433907|emb|CAG90185.2| DEHA2G04268p [Debaryomyces hansenii] Length = 426 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ EA +E + + +P +G+N Sbjct: 297 RDEGLHTDFACLLFS-------HLQNRPDAVIVERIITEAVTIEKEFFVDALPISLLGMN 349 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R +G + ++ T NPF +M E I L + NFFE RV++YQ+ Sbjct: 350 CNLMCQYVEFVADRLLVALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 406 >gi|254303614|ref|ZP_04970972.1| ribonucleoside-diphosphate reductase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323806|gb|EDK89056.1| ribonucleoside-diphosphate reductase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 344 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 8/126 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +IK + P+ ++ E +M A EIA+ + +G+ Sbjct: 216 RDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEIAWTEHIIGNRVLGIT 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116 + + E Y +++AN R +GLEPLF + +NP+ + D + E NFFE VT Y Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332 Query: 117 QQGAEL 122 + + Sbjct: 333 NMSSSI 338 >gi|225712968|gb|ACO12330.1| Ribonucleoside-diphosphate reductase small chain [Lepeophtheirus salmonis] Length = 335 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H +F + HL K + ++ E +E + +++P G +G+N Sbjct: 209 RDEGSHTDFAC-------LLYSHLENKLDPKYVLQIIKEGVEIEKEFVADSLPVGLIGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 A + Y++F+A+ + +E + +T+NPF +M I + + NFF+ RV+EYQ+ Sbjct: 262 AKMMKNYIEFVADNLLENLNIEKYY-HTKNPFNFMDN-ISMTGKTNFFDKRVSEYQR 316 >gi|158430770|pdb|2RCC|A Chain A, Crystal Structure Of Putative Class I Ribonucleotide Reductase (Np_241368.1) From Bacillus Halodurans At 1.90 A Resolution gi|158430771|pdb|2RCC|B Chain B, Crystal Structure Of Putative Class I Ribonucleotide Reductase (Np_241368.1) From Bacillus Halodurans At 1.90 A Resolution gi|158430772|pdb|2RCC|C Chain C, Crystal Structure Of Putative Class I Ribonucleotide Reductase (Np_241368.1) From Bacillus Halodurans At 1.90 A Resolution Length = 346 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 2/119 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH+ ++ ++ +E P L T+E + +T L +A LE + + G+N Sbjct: 218 RDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLXKAADLEKDWFRYIIGDKIPGIN 277 Query: 62 APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118 E Y+ FIAN+R Q+G E P + NP W+ D+ K +FFE + +Y + Sbjct: 278 PEDXETYISFIANKRAVQLGXEKPYPEIKHNPXKWIRAYEDVNSGKSDFFEQKSRQYAK 336 >gi|18640273|ref|NP_570429.1| CMLV039 [Camelpox virus] gi|18482949|gb|AAL73746.1|AF438165_36 ribonucleotide reductase small subunit [Camelpox virus M-96] gi|19717972|gb|AAG37497.1| CMP39L [Camelpox virus CMS] Length = 319 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ +++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVISIITDAVSIEQEFLTVALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + Y++F+A+R ++G + ++ NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVI-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302 >gi|269864962|ref|XP_002651756.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|269866721|ref|XP_002652369.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220062645|gb|EED41686.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220063933|gb|EED42300.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] Length = 135 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H + ++ EA +E + E++P +G+N Sbjct: 13 RDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMN 63 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 QY++F+A+R +G + ++ + NPF +M E I L+ + NFFE R YQ+G Sbjct: 64 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 119 >gi|306819883|ref|ZP_07453537.1| ribonucleotide-diphosphate reductase beta subunit [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304552130|gb|EFM40067.1| ribonucleotide-diphosphate reductase beta subunit [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 347 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++ ++K E H++T+E R M+ + EI +A + GL+ Sbjct: 219 RDENTHLWLFRSILLELKKEEAHIFTQENINLFRNMIKQGVEEEIRWAKYAIGDNIQGLS 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 E Y++++ N RC +G + +++ Y + P W+SE D K +FFE +V+ Y Sbjct: 279 MSMIEDYLKYLGNLRCKGLGFDNIYEGYEKEPESMSWVSEYSDPNAIKTDFFEAKVSAYA 338 Query: 118 QGAELKWD 125 + ++ D Sbjct: 339 KSTVIEDD 346 >gi|325294459|ref|YP_004280973.1| ribonucleotide reductase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064907|gb|ADY72914.1| ribonucleotide reductase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 352 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 5/100 (5%) Query: 31 QQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90 + K M A E ++ + + +G+N S E+Y ++AN+R +GL+P+F T Sbjct: 251 KDKIYEMFKVAVNQEQRFSKKVIGNKILGMNEKSIEEYTYYVANKRLKALGLDPIFPDTP 310 Query: 91 NPFPWMSEVIDLKKE----KNFFETRVTEYQQGAELK-WD 125 NP+ + + D E NFFE VT Y Q + ++ WD Sbjct: 311 NPYEHLERIADTGGEGNVKANFFEATVTSYNQASAVEGWD 350 >gi|241951880|ref|XP_002418662.1| ribonucleoside diphosphate reductase, putative [Candida dubliniensis CD36] gi|223642001|emb|CAX43965.1| ribonucleoside diphosphate reductase, putative [Candida dubliniensis CD36] Length = 394 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 11/120 (9%) Query: 2 RDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 RDE +H ++ + + +K + +P + K ++ EA +E Y + +P +G+ Sbjct: 266 RDEGIHTDYACLLFSYLKNKPSPEIIEK--------IITEAVTIEKKYFSDALPVSLLGM 317 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 N QY++F+A+R G + + T NPF +M E I L + NFFE RV++YQ+ Sbjct: 318 NCDLMCQYVEFVADRLLVAFGNKKYYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 375 >gi|320580024|gb|EFW94247.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR) complex [Pichia angusta DL-1] Length = 408 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL ++ EA +E Y + +P +G+N Sbjct: 277 RDEGLHTDFACLLFS-------HLNNTPNNDIVLKIITEAVDIEKRYFTDALPVNLLGMN 329 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R +G + + T NPF +M E I L + NFFE RV++YQ+ Sbjct: 330 CSLMCQYVEFVADRLLLSLGCKKHYNAT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 386 >gi|255658865|ref|ZP_05404274.1| ribonucleoside-diphosphate reductase, beta subunit [Mitsuokella multacida DSM 20544] gi|260849270|gb|EEX69277.1| ribonucleoside-diphosphate reductase, beta subunit [Mitsuokella multacida DSM 20544] Length = 347 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +++ ++ E P L+T E ++ R M+ E EIA+ + GLN Sbjct: 219 RDENTHLWLFRNILRDLRAEEPDLFTPEREEMMREMIREGVRQEIAWGKYAIGNEVEGLN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 E Y+ ++ N R IGL L++ + E P W+S+ + K +F E R T Y Sbjct: 279 EKMIEDYVHYLGNARAESIGLGTLYEGFEEEPSSMRWVSQYANPNFIKTDFIEGRSTAYA 338 Query: 118 QGAEL 122 + L Sbjct: 339 KSTAL 343 >gi|70921511|ref|XP_734071.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56506464|emb|CAH78308.1| hypothetical protein PC000956.02.0 [Plasmodium chabaudi chabaudi] Length = 87 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 45/69 (65%), Gaps = 2/69 (2%) Query: 52 TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 111 ++P +G+N+ QY++F+A+R +G +F +++NPF WM ++I L+ + NFFE Sbjct: 5 SLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKVF-HSKNPFSWM-DLISLQGKTNFFEK 62 Query: 112 RVTEYQQGA 120 RV +YQ+ Sbjct: 63 RVADYQKSG 71 >gi|288800286|ref|ZP_06405744.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp. oral taxon 299 str. F0039] gi|288332499|gb|EFC70979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp. oral taxon 299 str. F0039] Length = 347 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L+T + M+ E EIA+ + GLN Sbjct: 219 RDENTHLWLFRNIIQELKKEEPDLFTPDKVAVYEAMMREGVEQEIAWGQYVIGNDIQGLN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENP---FPWMSEVIDLKKEK-NFFETRVTEYQ 117 A + Y++++ N R H +G + L++ W+S+ + K +FFE + T Y Sbjct: 279 AQMVDDYIRYLGNLRWHSLGFDYLYEDNRTEPENMRWVSQYSNANMVKTDFFEAKSTAYA 338 Query: 118 QGAELKWD 125 + L+ D Sbjct: 339 KSTALEDD 346 >gi|269866693|ref|XP_002652360.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220062665|gb|EED41696.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] Length = 211 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H + ++ EA +E + E++P +G+N Sbjct: 89 RDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMN 139 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 QY++F+A+R +G + ++ + NPF +M E I L+ + NFFE R YQ+G Sbjct: 140 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 195 >gi|74025552|ref|XP_829342.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma brucei] gi|70834728|gb|EAN80230.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma brucei] Length = 337 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 33/119 (27%), Positives = 65/119 (54%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K + + ++ A L+E + + +P +G+N Sbjct: 210 RDEGLHTDFACLLYEK------YIVNKLPRDRVLEIICNAVLIEREFICDALPVRLIGMN 263 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G + + ++NPF +M ++I L+ + NFFE +V EYQ+ Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFM-DMISLQGKTNFFEKKVGEYQKAG 320 >gi|71648907|ref|XP_813233.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma cruzi strain CL Brener] gi|70878098|gb|EAN91382.1| ribonucleoside-diphosphate reductase small chain, putative [Trypanosoma cruzi] Length = 337 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + EN ++ K +++ R ++ A +E + + +P +G+N Sbjct: 210 RDEGLHTDFAC-----LLYEN-YIVNKLPKERIREIICSAVDIEREFICDAIPVRLLGMN 263 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A Y++F+A+R +G E + ++NPF +M E+I L+ + NFFE +V EYQ+ Sbjct: 264 ADLMSTYIEFVADRLLVALGNERHYN-SKNPFDFM-EMISLQGKTNFFEKKVGEYQKAG 320 >gi|269864946|ref|XP_002651751.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|269865852|ref|XP_002652068.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|269866233|ref|XP_002652201.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220062966|gb|EED41855.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220063214|gb|EED41988.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220063944|gb|EED42305.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] Length = 226 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H + ++ EA +E + E++P +G+N Sbjct: 104 RDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMN 154 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 QY++F+A+R +G + ++ + NPF +M E I L+ + NFFE R YQ+G Sbjct: 155 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 210 >gi|269864629|ref|XP_002651641.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220064151|gb|EED42415.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] Length = 277 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H + ++ EA +E + E++P +G+N Sbjct: 155 RDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMN 205 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 QY++F+A+R +G + ++ + NPF +M E I L+ + NFFE R YQ+G Sbjct: 206 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 261 >gi|167957419|ref|ZP_02544493.1| ribonucleotide-diphosphate reductase subunit beta [candidate division TM7 single-cell isolate TM7c] Length = 277 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 29/66 (43%), Positives = 40/66 (60%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+LHL FGI+++ I ENP L EF + R ++ +A LE AY + +P G +GLN Sbjct: 212 RDENLHLEFGINLLLTILHENPDLQDPEFADEIRNLILQAVELEEAYNRDMLPNGILGLN 271 Query: 62 APSCEQ 67 A Q Sbjct: 272 ADYVNQ 277 >gi|154505112|ref|ZP_02041850.1| hypothetical protein RUMGNA_02625 [Ruminococcus gnavus ATCC 29149] gi|153794591|gb|EDN77011.1| hypothetical protein RUMGNA_02625 [Ruminococcus gnavus ATCC 29149] Length = 347 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L+T E + + ML E EIA+ H + GL Sbjct: 219 RDENTHLWLFRNMILEMKKELPELFTPEHIEILKEMLKEGVRQEIAWGHYVIGNQIAGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 +Y+Q++ N R +G +P++ T+ P W+S+ + K +FFE + T Y Sbjct: 279 KEMITEYIQYLGNLRFTNLGFDPIYPDQTQEPDSMRWVSQYSNANMVKTDFFEAKSTAYA 338 Query: 118 QGAEL 122 + L Sbjct: 339 KSTAL 343 >gi|269865524|ref|XP_002651954.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220063427|gb|EED42101.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] Length = 205 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H + ++ EA +E + E++P +G+N Sbjct: 83 RDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMN 133 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 QY++F+A+R +G + ++ + NPF +M E I L+ + NFFE R YQ+G Sbjct: 134 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 189 >gi|320585888|gb|EFW98567.1| ribonucleotide reductase small subunit [Grosmannia clavigera kw1407] Length = 378 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 9/114 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +Q ++ +A +E + E +P +G+N Sbjct: 256 RDEGLHTDFACLLFS-------HLKNRPSKQLIEEIIVDAVKIEQEFLTEALPCALLGMN 308 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 + +QY++F+A+R +G + ++ T NPF +M E I L + NFFE RV E Sbjct: 309 STLMKQYIEFVADRLLVALGNDKVYNST-NPFDFM-ENISLGGKTNFFEKRVPE 360 >gi|157325080|ref|YP_001468505.1| gp125 [Listeria phage A511] gi|66732769|gb|AAY53360.1| gp57 [Listeria phage P100] gi|66733088|gb|AAY52906.1| gp125 [Listeria phage A511] Length = 343 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I ENP L T E A LE A++ E + +G G++ Sbjct: 215 RDELAHSKFISELIRAIVGENPELQTDELNDYVYASFRHAVELEQAWSSEVL-QGIEGID 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 Y+++ AN+ +GL+P+++ +TEN W+ D + + +FFE R + Y++ Sbjct: 274 VEEMLDYVKYRANKMLGMLGLQPMYQGHTENSMTWIKAYADNFTETKTDFFEMRNSSYKK 333 >gi|320527966|ref|ZP_08029132.1| ribonucleoside-diphosphate reductase, beta subunit [Solobacterium moorei F0204] gi|320131592|gb|EFW24156.1| ribonucleoside-diphosphate reductase, beta subunit [Solobacterium moorei F0204] Length = 349 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES HL +++ +++ E P L+T E Q R M++ EIA+ H + GLN Sbjct: 221 RDESTHLWLFRNILVELQKEEPELFTPENIQMIREMMNTGVEQEIAWGHYVIGDEIPGLN 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y++++ N R +G L+ +Y E P W+ + D K +FFE R + Y Sbjct: 281 KQMVTDYIKYLGNTRFATLGFGNLYEEYAEEPESMKWVKQYSDANMVKTDFFEARPSAYA 340 Query: 118 QGAELKWD 125 + ++ D Sbjct: 341 KSGAIEDD 348 >gi|146418573|ref|XP_001485252.1| hypothetical protein PGUG_02981 [Meyerozyma guilliermondii ATCC 6260] gi|146390725|gb|EDK38883.1| hypothetical protein PGUG_02981 [Meyerozyma guilliermondii ATCC 6260] Length = 418 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + + ++ EA +E + + +P +G+N Sbjct: 286 RDEGLHTDFACLLFS-------HLQNRPDPEIVEKIITEAVDIEKEFFTDALPISLLGMN 338 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R +G + ++ NPF +M E I L + NFFE RV++YQ+ Sbjct: 339 CKLMCQYVEFVADRLLVALGNKKIYNVA-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 395 >gi|19113338|ref|NP_596546.1| ribonucleotide reductase small subunit Suc22 [Schizosaccharomyces pombe 972h-] gi|9297110|sp|P36603|RIR2_SCHPO RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|3378511|emb|CAA20100.1| ribonucleotide reductase small subunit Suc22 [Schizosaccharomyces pombe] Length = 391 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 9/116 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ ++ EA +E Y + +P +G+N Sbjct: 261 RDEGLHTDFACLMFS-------HLKHRPGRKVVEAIIVEAVDIEKEYFTDALPVSLLGMN 313 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 QY++F+A+R +G + + T NPF +M E I L + NFFE +V++YQ Sbjct: 314 KDLMCQYIEFVADRLLVALGNDKYYNVT-NPFDFM-ENISLAGKTNFFEKKVSDYQ 367 >gi|322817571|gb|EFZ25271.1| ribonucleoside-diphosphate reductase small chain, putative [Trypanosoma cruzi] Length = 337 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + EN ++ K ++ R ++ A +E + +++P +G+N Sbjct: 210 RDEGLHTDFAC-----LLYEN-YIVNKLPTERIREIICSAVDIEREFICDSIPVRLLGMN 263 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A Y++F+A+R +G E + ++NPF +M E+I L+ + NFFE +V EYQ+ Sbjct: 264 ADLMSTYIEFVADRLLVALGNERHYN-SKNPFDFM-EMISLQGKTNFFEKKVGEYQKAG 320 >gi|269865926|ref|XP_002652096.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220063168|gb|EED41960.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] Length = 330 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H + ++ EA +E + E++P +G+N Sbjct: 219 RDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMN 269 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 QY++F+A+R +G + ++ + NPF +M E I L+ + NFFE R YQ+G Sbjct: 270 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 325 >gi|71416121|ref|XP_810103.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma cruzi strain CL Brener] gi|70874586|gb|EAN88252.1| ribonucleoside-diphosphate reductase small chain, putative [Trypanosoma cruzi] Length = 337 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + EN ++ K ++ R ++ A +E + +++P +G+N Sbjct: 210 RDEGLHTDFAC-----LLYEN-YIVNKLPTERIREIICSAVDIEREFICDSIPVRLLGMN 263 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A Y++F+A+R +G E + ++NPF +M E+I L+ + NFFE +V EYQ+ Sbjct: 264 ADLMSTYIEFVADRLLVALGNERHYN-SKNPFDFM-EMISLQGKTNFFEKKVGEYQKAG 320 >gi|269863618|ref|XP_002651286.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220064807|gb|EED42770.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] Length = 332 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H + ++ EA +E + E++P +G+N Sbjct: 219 RDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMN 269 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 QY++F+A+R +G + ++ + NPF +M E I L+ + NFFE R YQ+G Sbjct: 270 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 325 >gi|210631890|ref|ZP_03297102.1| hypothetical protein COLSTE_00992 [Collinsella stercoris DSM 13279] gi|210159815|gb|EEA90786.1| hypothetical protein COLSTE_00992 [Collinsella stercoris DSM 13279] Length = 352 Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I +++ E P L+T E + R ML E EIA+ + GL Sbjct: 224 RDENTHLWLFRNIILELQKEEPQLFTSENVEMLRQMLEEGVRQEIAWGRYVLGDAIPGLT 283 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 E Y++++ N R +G L++ Y P W+S+ + K +FFE + T Y Sbjct: 284 GDMVEGYIKYLGNLRWSSLGFGQLYEGYRSEPEDMAWVSQYSNANMVKTDFFEAKSTAYA 343 Query: 118 QGAEL 122 + L Sbjct: 344 KSTAL 348 >gi|56692684|ref|YP_164142.1| ribonucleoside-diphosphate reductase beta subunit [Singapore grouper iridovirus] gi|42517396|gb|AAS18062.1| ribonucleoside-diphosphate reductase beta subunit [Singapore grouper iridovirus] Length = 384 Score = 57.8 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 6/125 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY---AHETMPKGF 57 +RDE++H+ + + E P L T++ + + A LE A+ A P Sbjct: 253 VRDENIHVEGVSRLFETLCAEYPWLMTEKLVRDCKKDAERAAELEFAFIDLAFSYCP-AL 311 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNFFETRVTE 115 GL S + Y+ ++ N R +GL L +ENP PW+ +I+ NFFE VTE Sbjct: 312 DGLTPSSVKNYVLYVINLRASHMGLPKLMASAPSENPLPWVKWLIEGADLTNFFENHVTE 371 Query: 116 YQQGA 120 Y+ G Sbjct: 372 YETGG 376 >gi|56418235|gb|AAV91049.1| ribonucleotide reductase beta subunit [Grouper iridovirus] Length = 384 Score = 57.4 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 6/125 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY---AHETMPKGF 57 +RDE++H+ + + E P L T++ + + A LE A+ A P Sbjct: 253 VRDENIHVEGVSRLFETLCAEYPWLMTEKLVRDCKKDAERAAELEFAFIDLAFSYCP-AL 311 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNFFETRVTE 115 GL S + Y+ ++ N R +GL L +ENP PW+ +I+ NFFE VTE Sbjct: 312 DGLTPSSVKNYVLYVINLRASHMGLPKLMASAPSENPLPWVKWLIEGADLTNFFENHVTE 371 Query: 116 YQQGA 120 Y+ G Sbjct: 372 YETGG 376 >gi|297449|emb|CAA46231.1| ribonucleotide reductase, small subunit [Schizosaccharomyces pombe] gi|447147|prf||1913428B ribonucleotide reductase:SUBUNIT=small Length = 391 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 9/116 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ + ++ EA +E Y + +P +G+N Sbjct: 261 RDEGLHTDFACLMFS-------HLKHRPGRKLLKPIIVEAVDIEKEYFTDALPVSLLGMN 313 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 QY++F+A+R +G + + T NPF +M E I L + NFFE +V++YQ Sbjct: 314 KDLMCQYIEFVADRLLVALGNDKYYNVT-NPFDFM-ENISLAGKTNFFEKKVSDYQ 367 >gi|315497476|ref|YP_004086280.1| ribonucleoside-diphosphate reductase [Asticcacaulis excentricus CB 48] gi|315415488|gb|ADU12129.1| Ribonucleoside-diphosphate reductase [Asticcacaulis excentricus CB 48] Length = 350 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 2/121 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDESLH I + + E + TK LE + + G V G Sbjct: 200 VRDESLHCEGIIKLYHAFNKETGAV-TKAVADDIVDCCKTVVSLEDKFIDLSFEMGPVEG 258 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + +QY+++IA+ R Q+ L +F ENP PW+ ++ + NFFE R TEY + Sbjct: 259 MTPDDIKQYIRYIADWRLRQLELPEVFGVQENPLPWLQVLLSGVEHANFFEARATEYSKA 318 Query: 120 A 120 A Sbjct: 319 A 319 >gi|149182583|ref|ZP_01861054.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp. SG-1] gi|148849719|gb|EDL63898.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp. SG-1] Length = 345 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 4/123 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH+ + ++ ENP T E + A LEI + + + GL Sbjct: 217 RDEQLHVGLFEKIYKEVLHENPEYDTAELKVFGTQAFKRAAELEIEWGEQIIGNKIDGLL 276 Query: 62 APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEKNFFETRVTEYQQ 118 E Y++F+AN+R Q+G + P Y NP W+ + +DL K +FFE + +Y + Sbjct: 277 MSDLEAYIKFMANKRAEQMGFQAPFEGYRTNPLRWIVAYQEVDLGK-TDFFEQKSRQYTK 335 Query: 119 GAE 121 ++ Sbjct: 336 TSD 338 >gi|209170936|ref|YP_002268082.1| agip52 [Agrotis ipsilon multiple nucleopolyhedrovirus] gi|208436527|gb|ACI28754.1| ribonucleotide reductase-2B [Agrotis ipsilon multiple nucleopolyhedrovirus] Length = 313 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 65/118 (55%), Gaps = 10/118 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKS-RTMLHEATLLEIAYAHETMPKGFVGL 60 RDE LH +F + + ++ T++ + +M EA +E + +P +G+ Sbjct: 191 RDEGLHTDFAC-LYYKTRV------TEKLDSDTILSMFKEAVAIEKEFFTAALPVELLGM 243 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 NA S +Y++F+A+R Q+G +P + NPF +M+ I L+ + NFFE RV EY++ Sbjct: 244 NAQSMCEYIEFVADRLLVQLG-QPKYFNARNPFEFMNN-ISLEGKTNFFEKRVGEYKR 299 >gi|254418345|ref|ZP_05032069.1| ribonucleoside-diphosphate reductase, beta subunit [Brevundimonas sp. BAL3] gi|196184522|gb|EDX79498.1| ribonucleoside-diphosphate reductase, beta subunit [Brevundimonas sp. BAL3] Length = 349 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 2/121 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDESLH I + + E + TK +E + G V G Sbjct: 201 VRDESLHCEGIIKLYHAFNKETGAV-TKAVADDIVDCCKTVVNMEDRFIDLAFEMGSVQG 259 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + +QY++FIA+ R Q+ L ++ ENP PW+ ++ + NFFE R TEY + Sbjct: 260 MTPEDIKQYIRFIADWRLRQLKLPEVYGVKENPLPWLQSLLSGVEHANFFEARATEYSKA 319 Query: 120 A 120 A Sbjct: 320 A 320 >gi|257062099|ref|YP_003139987.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8802] gi|256592265|gb|ACV03152.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8802] Length = 355 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 13/132 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I + + PH + + M A E + + + +G+ Sbjct: 227 RDELSHVRLYQKLIPEARKVFPHSVDQIYD-----MFDRAVKYECQWTNHIVGNNILGIT 281 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVT 114 S EQY +++AN R IGL+PL+ KY ++P+ + D KKE NFFE VT Sbjct: 282 EASTEQYTKYLANIRLRSIGLDPLYPDIKYNKSPYTHLERFSDTKKEAHTKANFFEATVT 341 Query: 115 EYQQGAELK-WD 125 Y + + WD Sbjct: 342 SYVMSSGITGWD 353 >gi|218249013|ref|YP_002374384.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8801] gi|218169491|gb|ACK68228.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8801] Length = 344 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 13/132 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I + + PH + + M A E + + + +G+ Sbjct: 216 RDELSHVRLYQKLIPEARKVFPHSVDQIYD-----MFDRAVKYECQWTNHIVGNNILGIT 270 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVT 114 S EQY +++AN R IGL+PL+ KY ++P+ + D KKE NFFE VT Sbjct: 271 EASTEQYTKYLANIRLRSIGLDPLYPDIKYNKSPYTHLERFSDTKKEAHTKANFFEATVT 330 Query: 115 EYQQGAELK-WD 125 Y + + WD Sbjct: 331 SYVMSSGITGWD 342 >gi|282879357|ref|ZP_06288101.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella buccalis ATCC 35310] gi|282881358|ref|ZP_06290037.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella timonensis CRIS 5C-B1] gi|281298554|gb|EFA90979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella buccalis ATCC 35310] gi|281304764|gb|EFA96845.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella timonensis CRIS 5C-B1] Length = 347 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P ++T E + M+ E EIA+ + GLN Sbjct: 219 RDENTHLWLFRNIIKELKKEEPEMFTPEKVKVYEEMMREGVRQEIAWGQYVIGNDIQGLN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117 A Y+ ++ N R H +G + L++ + W+++ D K +FFE + T Y Sbjct: 279 AQMVTDYIHYLGNLRWHSLGFDYLYEDNQKEPEDMKWVAQYSDPNMVKTDFFEAKSTAYA 338 Query: 118 QGAELKWD 125 + ++ D Sbjct: 339 KSTAIEDD 346 >gi|68485781|ref|XP_713171.1| hypothetical protein CaO19.9424 [Candida albicans SC5314] gi|68485874|ref|XP_713125.1| hypothetical protein CaO19.1868 [Candida albicans SC5314] gi|46434604|gb|EAK94008.1| hypothetical protein CaO19.1868 [Candida albicans SC5314] gi|46434651|gb|EAK94054.1| hypothetical protein CaO19.9424 [Candida albicans SC5314] gi|238883648|gb|EEQ47286.1| ribonucleoside-diphosphate reductase small chain 1 [Candida albicans WO-1] Length = 394 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H ++ + + +K K + ++ EA +E Y + +P +G+N Sbjct: 266 RDEGIHTDYACLLFSYLK-------NKPSSEIIEKIITEAVDIEKEYFSDALPVSLLGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R G + + T NPF +M E I L + NFFE RV++YQ+ Sbjct: 319 CDLMCQYVEFVADRLLVAFGNKKYYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 375 >gi|90592764|ref|YP_529717.1| RR2B [Agrotis segetum nucleopolyhedrovirus] gi|71559214|gb|AAZ38213.1| RR2B [Agrotis segetum nucleopolyhedrovirus] Length = 313 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 8/117 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F N + K +M EA +E + +P +G+N Sbjct: 191 RDEGLHTDFAC------LYYNTRVHDKLAPDTVLSMFKEAVAIEKEFFTAALPAALLGMN 244 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 A S Y++F+A+R Q+ +P + NPF +M+ I L+ + NFFE RV EY++ Sbjct: 245 AQSMCDYIEFVADRLLVQLH-QPKHFHARNPFEFMNN-ISLEGKTNFFEKRVGEYKR 299 >gi|19703451|ref|NP_603013.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19713529|gb|AAL94312.1| Ribonucleoside-diphosphate reductase beta chain [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 348 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 8/126 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +IK + P+ ++ E +M A EI + + +G+ Sbjct: 220 RDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWTEHIIGNRVLGIT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116 + + E Y +++AN R +GLEPLF + +NP+ + D + E NFFE VT Y Sbjct: 277 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 336 Query: 117 QQGAEL 122 + + Sbjct: 337 NMSSSI 342 >gi|295691241|ref|YP_003594934.1| Ribonucleoside-diphosphate reductase [Caulobacter segnis ATCC 21756] gi|295433144|gb|ADG12316.1| Ribonucleoside-diphosphate reductase [Caulobacter segnis ATCC 21756] Length = 346 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 2/121 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDESLH + I + + E + TK LE + G + G Sbjct: 198 IRDESLHCDGIIKLYHAFNKETGAV-TKAVADDIVDCCKHVVGLEDKFIDLAFEAGEIQG 256 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + + Y++FIA+ R Q+ L ++ ENP PW+ ++ + NFFE R TEY + Sbjct: 257 MTPDDIKSYIRFIADWRLRQLQLPEVYGVKENPLPWLQSLLSGVEHANFFEARATEYSKA 316 Query: 120 A 120 A Sbjct: 317 A 317 >gi|296329016|ref|ZP_06871523.1| ribonucleotide-diphosphate reductase beta subunit [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296153909|gb|EFG94720.1| ribonucleotide-diphosphate reductase beta subunit [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 348 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 8/126 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +IK + P+ ++ E +M A EI + + +G+ Sbjct: 220 RDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWTEHIIGNRVLGIT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116 + + E Y +++AN R +GLEPLF + +NP+ + D + E NFFE VT Y Sbjct: 277 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 336 Query: 117 QQGAEL 122 + + Sbjct: 337 NMSSSI 342 >gi|294784669|ref|ZP_06749957.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium sp. 3_1_27] gi|294486383|gb|EFG33745.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium sp. 3_1_27] Length = 344 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 8/126 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +IK + P+ ++ E +M A EI + + +G+ Sbjct: 216 RDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWTEHIIGNRVLGIT 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116 + + E Y +++AN R +GLEPLF + +NP+ + D + E NFFE VT Y Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332 Query: 117 QQGAEL 122 + + Sbjct: 333 NMSSSI 338 >gi|237743586|ref|ZP_04574067.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium sp. 7_1] gi|229432617|gb|EEO42829.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium sp. 7_1] Length = 344 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 8/126 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +IK + P+ ++ E +M A EI + + +G+ Sbjct: 216 RDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWTEHIIGNRVLGIT 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116 + + E Y +++AN R +GLEPLF + +NP+ + D + E NFFE VT Y Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332 Query: 117 QQGAEL 122 + + Sbjct: 333 NMSSSI 338 >gi|292397811|ref|YP_003517877.1| RR2b [Lymantria xylina MNPV] gi|291065528|gb|ADD73846.1| RR2b [Lymantria xylina MNPV] Length = 338 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 11/118 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL + + R ++ +A +E + E +P +GLN Sbjct: 214 RDEGLHCDFACLMFK-------HLVQRPSAARVREIVTDAVAIEQRFLTEALPVRLLGLN 266 Query: 62 APSCEQYMQFIANR-RCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + QY++F+A+R IG + T NP +M+ +I L+ + NFFE +V EYQ+ Sbjct: 267 CETMSQYIEFVADRLLVDLIGTKHY--NTANPLDFMT-LISLEGKTNFFEKKVGEYQK 321 >gi|9631087|ref|NP_047757.1| ribonucleotide reductase small subunit homolog [Lymantria dispar MNPV] gi|3822355|gb|AAC70306.1| ribonucleotide reductase small subunit homolog [Lymantria dispar MNPV] Length = 348 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL + + R ++ +A +E + E +P +GLN Sbjct: 224 RDEGLHCDFACLLFK-------HLVQRPSAARVREIVTDAVAIEQRFLTEALPVRLLGLN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + QY++F+A+R ++ + T NP +M+ +I L+ + NFFE +V EYQ+ Sbjct: 277 CETMSQYIEFVADRLLLELVGAKHYN-TPNPLDFMN-LISLEGKTNFFEKKVGEYQK 331 >gi|47208564|emb|CAF96041.1| unnamed protein product [Tetraodon nigroviridis] Length = 352 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 2/71 (2%) Query: 48 YAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107 + E +P +G+N +QY++F+A+R +GL ++ ENPF +M E I L+ + N Sbjct: 266 FLTEALPVDLIGMNRCLMKQYIEFVADRLFADLGLAKMYN-AENPFDFM-EAISLEGKTN 323 Query: 108 FFETRVTEYQQ 118 FFE RV EYQ+ Sbjct: 324 FFEKRVAEYQR 334 >gi|256846215|ref|ZP_05551673.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium sp. 3_1_36A2] gi|256719774|gb|EEU33329.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium sp. 3_1_36A2] Length = 344 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 8/126 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +IK + P+ ++ E +M A EI + + +G+ Sbjct: 216 RDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWTEHIIGNRVLGIT 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116 + + E Y +++AN R +GLEPLF + +NP+ + D + E NFFE VT Y Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332 Query: 117 QQGAEL 122 + + Sbjct: 333 NMSSSI 338 >gi|329888543|ref|ZP_08267141.1| ribonucleotide reductase, small chain family protein [Brevundimonas diminuta ATCC 11568] gi|328847099|gb|EGF96661.1| ribonucleotide reductase, small chain family protein [Brevundimonas diminuta ATCC 11568] Length = 348 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 67/143 (46%), Gaps = 28/143 (19%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHE-----ATLLE-----IAYAH 50 +RDESLH GI I+ H + KE ++ + + T++E I A Sbjct: 201 VRDESLHCE-GI-------IKLYHAFNKETGAVTKAVADDIVDCCKTVIEMEDKFIDLAF 252 Query: 51 ETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFE 110 E P G+ + Y++FIA+ R Q+ L ++ TENP PW+ ++ + NFFE Sbjct: 253 EMGPVN--GMTPDDIKAYIRFIADWRLRQLHLPEVYGVTENPLPWLQALLSGVEHANFFE 310 Query: 111 TRVTEYQQ--------GAELKWD 125 R TEY + GA+ WD Sbjct: 311 ARATEYSKAATQGAWHGADGVWD 333 >gi|22788780|ref|NP_690492.1| Rr2 [Heliothis zea virus 1] gi|22671540|gb|AAN04367.1|AF451898_72 Rr2 [Heliothis zea virus 1] Length = 333 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 67/118 (56%), Gaps = 8/118 (6%) Query: 2 RDESLHLNFGIDVI-NQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 RDE LH +F I + N ++ E + +K ++ +A +E + E++P +G+ Sbjct: 205 RDEGLHCDFAILLFRNYLRPE-----CRSSDEKVINIVTDAVRIEQEFLTESLPVSMIGM 259 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 N +Y++F+A+R +++ ++ +NPF +M+ I L+ + NFFE +V+EY++ Sbjct: 260 NCKLMCEYIEFVADRLLYELIGRKIYN-AKNPFDFMTS-ISLEGKTNFFEKKVSEYKR 315 >gi|322378346|ref|ZP_08052803.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter suis HS1] gi|322379688|ref|ZP_08054002.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter suis HS5] gi|321147887|gb|EFX42473.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter suis HS5] gi|321149232|gb|EFX43675.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter suis HS1] Length = 342 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL+ ++IN ++ E L++ E + M +A LE A+ + L+ Sbjct: 218 RDELTHLHLFQNMINTLRKERSDLFSPELIAEVNEMFKQAVDLESAWGAYITQGEMLDLS 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 Y +++A+ R +GL L+ ++NP W+ + + + NFFE +V+ Y +G+ Sbjct: 278 PQILRTYTEYLADTRLAVVGLPKLYN-SQNPIKWVDQFANFNSHRSNFFEAKVSNYSKGS 336 >gi|269866968|ref|XP_002652448.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220062479|gb|EED41609.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] Length = 100 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 2/85 (2%) Query: 35 RTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP 94 + ++ EA +E + E++P +G+N QY++F+A+R +G + ++ + NPF Sbjct: 2 KDIVREAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPFD 60 Query: 95 WMSEVIDLKKEKNFFETRVTEYQQG 119 +M E I L+ + NFFE R YQ+G Sbjct: 61 FM-ENISLQGKTNFFERREANYQKG 84 >gi|313887688|ref|ZP_07821370.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846297|gb|EFR33676.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus harei ACS-146-V-Sch2b] Length = 346 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 8/130 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I ++K E P ++T E +K + ML + EIA+ + GLN Sbjct: 218 RDENTHLWLFRSIILEMKKEEPEIFTDENIEKYKEMLKKGVEEEIAWGKYVIGDEIKGLN 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKKEK-NFFETRVTE 115 E Y+ ++ N R +G LF EN W+SE D + K +FFE R + Sbjct: 278 EKMIEDYIMYLGNLRSRNLGFGNLF--DENIDEPESMKWVSEYSDPNQIKTDFFEARPSA 335 Query: 116 YQQGAELKWD 125 Y + + ++ D Sbjct: 336 YSKSSVIEDD 345 >gi|258567064|ref|XP_002584276.1| ribonucleoside-diphosphate reductase small chain [Uncinocarpus reesii 1704] gi|237905722|gb|EEP80123.1| ribonucleoside-diphosphate reductase small chain [Uncinocarpus reesii 1704] Length = 401 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + H+ + ++ EA +E + + +P +G+N Sbjct: 265 RDEGLHTDFACLLFS-------HIRHRPTPAAVEAIITEAVEIEKEFLTDALPCALLGMN 317 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G + + T NPF +M I L + NFFE RV +YQ+ Sbjct: 318 SKLMCQYIEFVADRLLVALGNKKFYHAT-NPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 374 >gi|242777635|ref|XP_002479074.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces stipitatus ATCC 10500] gi|218722693|gb|EED22111.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces stipitatus ATCC 10500] Length = 406 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + + ++ +A +E + + +P +G+N Sbjct: 268 RDEGLHTDFACLLFS-------HLNNRPNPKVIEDIIVDAVAIEQEFLTDALPCSLLGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G + + T NPF +M E I L + NFFE RV +YQ+ Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYYNST-NPFDFM-ENISLAGKTNFFEKRVGDYQKAG 377 >gi|213402763|ref|XP_002172154.1| ribonucleoside-diphosphate reductase small chain [Schizosaccharomyces japonicus yFS275] gi|212000201|gb|EEB05861.1| ribonucleoside-diphosphate reductase small chain [Schizosaccharomyces japonicus yFS275] Length = 392 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 9/116 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + +K H K+ ++ ++ EA +E Y + +P +G+N Sbjct: 263 RDEGVHTDFACLMFSHLK----HRPGKKVVER---IIIEAVNIEKEYFTDALPVYLLGMN 315 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 QY++F+A+R +G E + T NPF +M E I L + NFFE +V++YQ Sbjct: 316 CDLMCQYIEFVADRLLLSLGNEKYYNVT-NPFDFM-ENISLAGKTNFFEKKVSDYQ 369 >gi|331083185|ref|ZP_08332301.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae bacterium 6_1_63FAA] gi|330404574|gb|EGG84114.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae bacterium 6_1_63FAA] Length = 347 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I Q+K E P L+TKE Q + ML E EIA+ H + G++ Sbjct: 219 RDENTHLWLFRNMILQLKEEEPELFTKENIQALKEMLMEGVEQEIAWGHYVLGDDIPGIS 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 +Y++++ N R +G + ++ Y + P W+S + K +FFE + T Y Sbjct: 279 KEMITEYIKYLGNLRFTGLGFDVVYPGYEKEPESMKWVSYYSNANMVKTDFFEAKSTAYA 338 Query: 118 QGAEL 122 + L Sbjct: 339 KSTAL 343 >gi|62866936|gb|AAY17359.1| ribonucleotide reductase small subunit [Haemonchus contortus] Length = 374 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 58/99 (58%), Gaps = 2/99 (2%) Query: 24 HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE 83 H+ K Q++ ++ +A +E + E++P +G+N QY++++A+ ++G E Sbjct: 264 HIKNKLSQERIYYIIRDAVAIEQEFLSESLPVDMIGMNCRLMCQYIEYVADHLLVELGCE 323 Query: 84 PLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122 + K ++NPF +M E I + + NFFE +V+EYQ+ L Sbjct: 324 KICK-SKNPFDFM-ENISIDGKTNFFEKKVSEYQRPGVL 360 >gi|209972895|ref|YP_002300342.1| gp4 [Bacillus phage SPO1] gi|209871215|gb|ACI90971.1| gp4 [Bacillus phage SPO1] Length = 346 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 4/123 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F V+ + E P L T+E M+ EA LEI Y+ + + GL+ Sbjct: 218 RDEVAHAYFFSQVLRYLMAERPELHTEENVNFIYDMMQEAADLEIEYSQKIL-HDIPGLD 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL---KKEKNFFETRVTEYQQ 118 E Y++ + NRR +GL+ ++ EN PWM D + + + FE + Y++ Sbjct: 277 LEELEGYIKSLCNRRLRGVGLDDIYAGVENSMPWMIAFDDGSNNQTKSDMFEQKSRNYKK 336 Query: 119 GAE 121 E Sbjct: 337 VDE 339 >gi|260589755|ref|ZP_05855668.1| ribonucleoside-diphosphate reductase, beta subunit [Blautia hansenii DSM 20583] gi|260539995|gb|EEX20564.1| ribonucleoside-diphosphate reductase, beta subunit [Blautia hansenii DSM 20583] Length = 359 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I Q+K E P L+TKE Q + ML E EIA+ H + G++ Sbjct: 231 RDENTHLWLFRNMILQLKEEEPELFTKENIQALKEMLMEGVEQEIAWGHYVLGDDIPGIS 290 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 +Y++++ N R +G + ++ Y + P W+S + K +FFE + T Y Sbjct: 291 KEMITEYIKYLGNLRFTGLGFDVVYPGYEKEPESMKWVSYYSNANMVKTDFFEAKSTAYA 350 Query: 118 QGAEL 122 + L Sbjct: 351 KSTAL 355 >gi|297587320|ref|ZP_06945965.1| ribonucleotide-diphosphate reductase beta subunit [Finegoldia magna ATCC 53516] gi|297575301|gb|EFH94020.1| ribonucleotide-diphosphate reductase beta subunit [Finegoldia magna ATCC 53516] Length = 354 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +K E P L+T+E + + M+ + + EI +A + + GL+ Sbjct: 226 RDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGSEAEIEWAKYVIGEKIQGLS 285 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK-NFFETRVTEYQ 117 E Y++++ N R +G ++ E P W+SE D K K +FFE + + Y Sbjct: 286 IKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIKTDFFEAKPSAYS 345 Query: 118 QGAELKWD 125 + A ++ D Sbjct: 346 KSAIIEDD 353 >gi|197103810|ref|YP_002129187.1| ribonucleoside-diphosphate reductase, beta subunit [Phenylobacterium zucineum HLK1] gi|196477230|gb|ACG76758.1| ribonucleoside-diphosphate reductase, beta subunit [Phenylobacterium zucineum HLK1] Length = 350 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 2/121 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDESLH I + + E + T+ LE + G V G Sbjct: 201 VRDESLHCEGIIKLYHAFNKETGAV-TQAVADDIVDCCKTVVGLEDKFIDLAFEAGEVQG 259 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + +QY++FIA+ R Q+ L ++ ENP PW+ ++ + NFFE R TEY + Sbjct: 260 MTPDDIKQYIRFIADWRLKQLHLPQVYGIKENPLPWLQSMLSGVEHANFFEARATEYSKA 319 Query: 120 A 120 A Sbjct: 320 A 320 >gi|227871657|ref|ZP_03990072.1| ribonucleoside-diphosphate reductase [Oribacterium sinus F0268] gi|227842499|gb|EEJ52714.1| ribonucleoside-diphosphate reductase [Oribacterium sinus F0268] Length = 347 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL F +++ ++K E P L+ + + M+ + EIA+ + GLN Sbjct: 219 RDENTHLWFFRNMLLELKKEEPELFDEAHIAEITEMVKKGVEQEIAWGQYVIGDSIPGLN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 E Y++++ N R +GL L++ Y + P W+S+ D K +FFE R T Y Sbjct: 279 GKMVEDYIRYLGNLRYRSLGLPNLYEGYEKEPESMKWVSQYADANMVKTDFFEARSTAYA 338 Query: 118 QGAELKWD 125 + ++ D Sbjct: 339 KSTAIEDD 346 >gi|322499081|emb|CBZ34153.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 269 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 58/99 (58%), Gaps = 2/99 (2%) Query: 22 NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIG 81 N H+ K +++ ++ +A +E + + +P +G+NA QY++F+A+R +G Sbjct: 156 NSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMNAELMAQYIEFVADRLLVSLG 215 Query: 82 LEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 E ++ T+ PF +M E+I L+ + NFFE +V EYQ+ Sbjct: 216 EEKHYRSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAG 252 >gi|73974200|ref|XP_858061.1| PREDICTED: similar to ribonucleotide reductase M2 B (TP53 inducible) isoform 3 [Canis familiaris] Length = 338 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 22/119 (18%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ A +E + E +P G +G+N Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++F+ ENPF +M E I L+ + NFFE RV EYQ+ A Sbjct: 279 CVLMKQYIEFVFQ--------------AENPFDFM-ENISLEGKTNFFEKRVAEYQRFA 322 >gi|17567153|ref|NP_508269.1| hypothetical protein F19G12.2 [Caenorhabditis elegans] gi|10864352|gb|AAG24065.1| Hypothetical protein F19G12.2 [Caenorhabditis elegans] Length = 668 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 52/82 (63%), Gaps = 2/82 (2%) Query: 37 MLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96 +++E+ L+E + E++P +G+N +Y++F+A+ ++G + T+NPF +M Sbjct: 571 IINESVLVEQDFVRESLPTNLIGMNQHMMCKYVEFVADLLLEELGYSKRYN-TKNPFDFM 629 Query: 97 SEVIDLKKEKNFFETRVTEYQQ 118 E I ++ + NFFE RV+EYQ+ Sbjct: 630 -ENISIEGKTNFFEKRVSEYQR 650 >gi|159030376|emb|CAO91271.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 355 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 13/132 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I + PH + ++ M A E + + + +G+ Sbjct: 227 RDELSHVRLYQKLIPEAMAIFPHSVEQIYE-----MFDSAVKHECCWTNHIVGNDILGIT 281 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVT 114 S EQY +++AN R IGLEPL+ KY ++P+ + D KKE NFFE VT Sbjct: 282 EYSTEQYTKYLANIRLKAIGLEPLYREEKYNKSPYNHLERFSDTKKEGHTKANFFEATVT 341 Query: 115 EYQQGAELK-WD 125 Y + L WD Sbjct: 342 SYVMSSGLTGWD 353 >gi|67921622|ref|ZP_00515140.1| Ribonucleoside-diphosphate reductase [Crocosphaera watsonii WH 8501] gi|67856734|gb|EAM51975.1| Ribonucleoside-diphosphate reductase [Crocosphaera watsonii WH 8501] Length = 321 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 13/132 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I + + PH + ++ M A E + + + +G+ Sbjct: 193 RDELSHVRLYQKLIPEARKVFPHSVEQIYE-----MFDMAVNYECRWTNHIVGNNILGIT 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK----EKNFFETRVT 114 S E+Y +++AN R IGLEPL+ KY+++P+ + D KK + NFFE VT Sbjct: 248 ESSTEKYTKYLANIRLRSIGLEPLYPEPKYSKSPYTHLERFSDTKKAAHTKANFFEATVT 307 Query: 115 EYQQGAELK-WD 125 Y + L WD Sbjct: 308 SYVMSSGLTGWD 319 >gi|299747484|ref|XP_001837064.2| ribonucleotide reductase small subunit [Coprinopsis cinerea okayama7#130] gi|298407540|gb|EAU84681.2| ribonucleotide reductase small subunit [Coprinopsis cinerea okayama7#130] Length = 379 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 32/118 (27%), Positives = 64/118 (54%), Gaps = 9/118 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + ++ + PH ++ EA +E + + +P +G+N Sbjct: 249 RDEGMHTDFACLLFAYLR-KRPH------SDTILAIVTEAVEIEKEFFSDALPVSLIGMN 301 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + QY++F+A+R +G + + + +NPF +M E+I ++ + NFFE RV++Y + Sbjct: 302 SSLMNQYIEFVADRLLTSLGNDKHY-HVDNPFDFM-ELISMEGKANFFEKRVSDYAKA 357 >gi|291461082|ref|ZP_06026838.2| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium periodonticum ATCC 33693] gi|291379059|gb|EFE86577.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium periodonticum ATCC 33693] Length = 348 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 8/126 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +IK + P ++ E +M A EI + + +G+ Sbjct: 220 RDELSHVVLFRSIVKEIKNDYPEFFSAE---TIYSMFKTAVEQEINWTEHIIGNRVLGIT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116 + + E Y +++AN R +GLEPL+ + +NP+ + D + E NFFE VT Y Sbjct: 277 SQTTEAYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 336 Query: 117 QQGAEL 122 + + Sbjct: 337 NMSSSI 342 >gi|15639047|ref|NP_218493.1| ribonucleotide-diphosphate reductase subunit beta [Treponema pallidum subsp. pallidum str. Nichols] gi|189025287|ref|YP_001933059.1| ribonucleotide-diphosphate reductase subunit beta [Treponema pallidum subsp. pallidum SS14] gi|6093976|sp|O83092|RIR2_TREPA RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit gi|3322311|gb|AAC65049.1| ribonucleoside-diphosphate reductase, subunit beta (nrdB) [Treponema pallidum subsp. pallidum str. Nichols] gi|189017862|gb|ACD70480.1| ribonucleoside-diphosphate reductase, subunit beta [Treponema pallidum subsp. pallidum SS14] gi|291059468|gb|ADD72203.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema pallidum subsp. pallidum str. Chicago] Length = 351 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +++ E P ++T + R M+ E EI + + GLN Sbjct: 223 RDENTHLWLFRSIIQELQKEEPQVFTARNVRLFRDMIREGCEQEIKWGDYVIGDQIPGLN 282 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y++++ N RC +G EPL+ + W+S+ + K +FFE + T Y Sbjct: 283 RHMVADYIRYLGNLRCENLGFEPLYEGHRVEPESMSWVSQYSNANLIKTDFFEAKSTAYA 342 Query: 118 QGAEL 122 + + + Sbjct: 343 KSSAM 347 >gi|319785673|ref|YP_004145148.1| ribonucleotide reductase [Pseudoxanthomonas suwonensis 11-1] gi|317464185|gb|ADV25917.1| ribonucleotide reductase [Pseudoxanthomonas suwonensis 11-1] Length = 354 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T E A LE + E + G G++ Sbjct: 226 RDELAHTKFISEVIRAIVGENPELQTDELADYVHLAFRHAIELETQWTGEVL-DGIDGID 284 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L+ + T+N PW+ D + + +FFE R Y++ Sbjct: 285 VDEMIRYVKYRANKMAGMLGIESLYTETTDNVMPWIRAYADNFTETKTDFFEMRNASYKK 344 >gi|269861752|ref|XP_002650564.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220065950|gb|EED43491.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] Length = 106 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 2/83 (2%) Query: 37 MLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96 ++ EA +E + E++P +G+N QY++F+A+R +G + ++ + NPF +M Sbjct: 10 IVREAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM 68 Query: 97 SEVIDLKKEKNFFETRVTEYQQG 119 E I L+ + NFFE R YQ+G Sbjct: 69 -ENISLQGKTNFFERREANYQKG 90 >gi|237738722|ref|ZP_04569203.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium sp. 2_1_31] gi|229423825|gb|EEO38872.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium sp. 2_1_31] Length = 344 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 8/126 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +IK + P ++ E +M A EI + + +G+ Sbjct: 216 RDELSHVVLFRSIVKEIKNDYPEFFSAE---TIYSMFKTAVEQEINWTEHIIGNRVLGIT 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116 + + E Y +++AN R +GLEPL+ + +NP+ + D + E NFFE VT Y Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332 Query: 117 QQGAEL 122 + + Sbjct: 333 NMSSSI 338 >gi|119485472|ref|ZP_01619800.1| hypothetical protein L8106_10031 [Lyngbya sp. PCC 8106] gi|119457228|gb|EAW38354.1| hypothetical protein L8106_10031 [Lyngbya sp. PCC 8106] Length = 359 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 13/132 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I + PH + ++ M A E + + + + +G+ Sbjct: 231 RDELSHVRLYQKLIPEAMQTFPHSVEQIYE-----MFDTAVQHECRWTNHIVGRNILGIT 285 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVT 114 S EQY +++AN R IGL+PL+ +Y+++P+ + D KKE NFFE VT Sbjct: 286 ETSTEQYTKYLANARLRSIGLKPLYTDPRYSKSPYTHLERFSDTKKEAHTKANFFEASVT 345 Query: 115 EYQQGAEL-KWD 125 Y + + WD Sbjct: 346 SYVMSSGVGGWD 357 >gi|282174133|ref|YP_003358235.1| ORF96 [Anguillid herpesvirus 1] gi|281308976|gb|ADA57859.1| ORF96 [Anguillid herpesvirus 1] Length = 328 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 8/117 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K ++ ++ EA +E + E +P +G+N Sbjct: 202 RDEGLHCDFACLLFKD------HILGKPGYERVSQIVTEAVEIEKEFLSEALPVRLLGIN 255 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 Y++F+A+R +G P + +NPF +M E I ++ + NFFE V++Y++ Sbjct: 256 CEQMCSYIEFVADRLLAALGF-PKRYHVKNPFGFM-ESISMEGKTNFFEKNVSQYKK 310 >gi|16332312|ref|NP_443040.1| hypothetical protein slr0591 [Synechocystis sp. PCC 6803] gi|1653942|dbj|BAA18852.1| slr0591 [Synechocystis sp. PCC 6803] Length = 355 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 8/97 (8%) Query: 37 MLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPF 93 M +A E + + + +G+ S EQY +++AN R IGL+PL+ +Y ++P+ Sbjct: 257 MFDKAVEFECRWTNHIVGNNILGITESSTEQYTKYLANSRLRAIGLDPLYTDARYGKSPY 316 Query: 94 PWMSEVIDLKKE----KNFFETRVTEYQQGAELK-WD 125 + D KKE NFFE VT Y + + WD Sbjct: 317 THLERFSDTKKEAHTKANFFEATVTSYVMSSGVSGWD 353 >gi|284929768|ref|YP_003422290.1| ribonucleotide reductase, subunit beta [cyanobacterium UCYN-A] gi|284810212|gb|ADB95909.1| ribonucleotide reductase, beta subunit [cyanobacterium UCYN-A] Length = 354 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 13/132 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I + + PH + ++ M A E + + + +G+ Sbjct: 226 RDELSHVRLYQKLIPEARKVFPHSTEQIYE-----MFDTAVNHECRWTNHIVGSNILGIT 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVT 114 S EQY +++AN R IGLEPL+ ++T++P+ + D KK+ NFFE+ VT Sbjct: 281 ESSTEQYTKYLANIRLRSIGLEPLYTGEEFTKSPYSHLERFSDTKKDGHTKANFFESTVT 340 Query: 115 EYQQGAELK-WD 125 Y + + WD Sbjct: 341 SYVMSSGVSGWD 352 >gi|303234233|ref|ZP_07320879.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia magna BVS033A4] gi|302494774|gb|EFL54534.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia magna BVS033A4] Length = 347 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +K E P L+T+E + + M+ + EI +A + + GL+ Sbjct: 219 RDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGAEAEIEWAKYVIGEKIQGLS 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK-NFFETRVTEYQ 117 E Y++++ N R +G ++ E P W+SE D K K +FFE + + Y Sbjct: 279 IKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIKTDFFEAKPSAYS 338 Query: 118 QGAELKWD 125 + A ++ D Sbjct: 339 KSAIIEDD 346 >gi|302379704|ref|ZP_07268189.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia magna ACS-171-V-Col3] gi|302312611|gb|EFK94607.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia magna ACS-171-V-Col3] Length = 347 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +K E P L+T+E + + M+ + EI +A + + GL+ Sbjct: 219 RDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGAEAEIEWAKYVIGEKIQGLS 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK-NFFETRVTEYQ 117 E Y++++ N R +G ++ E P W+SE D K K +FFE + + Y Sbjct: 279 IKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIKTDFFEAKPSAYS 338 Query: 118 QGAELKWD 125 + A ++ D Sbjct: 339 KSAIIEDD 346 >gi|237742881|ref|ZP_04573362.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium sp. 4_1_13] gi|229430529|gb|EEO40741.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium sp. 4_1_13] Length = 344 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 8/126 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +IK + P+ ++ E +M A EI + + +G+ Sbjct: 216 RDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWTEHIIGNRVLGIT 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116 + + E Y +++AN R +GLEPL+ + +NP+ + D + E NFFE VT Y Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332 Query: 117 QQGAEL 122 + + Sbjct: 333 NMSSSI 338 >gi|222824493|ref|YP_002576067.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter lari RM2100] gi|222539714|gb|ACM64815.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter lari RM2100] Length = 340 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+ K M +A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRKERADLFNDTNVSKIYDMFKKAGELEIKWGKYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 E+Y+ ++ ++R I L+ ++ ++P W+ + +K NFFE++VT Y +G+ Sbjct: 276 DDIIEEYIHYLVDQRLIAINLDKIYN-VKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334 >gi|194319980|pdb|2VUX|A Chain A, Human Ribonucleotide Reductase, Subunit M2 B gi|194319981|pdb|2VUX|B Chain B, Human Ribonucleotide Reductase, Subunit M2 B Length = 326 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 9/106 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N Sbjct: 230 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 282 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107 +QY++F+A+R ++G +F+ ENPF +M E I L+ + N Sbjct: 283 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTN 326 >gi|169824933|ref|YP_001692544.1| ribonucleotide-diphosphate reductase subunit beta [Finegoldia magna ATCC 29328] gi|167831738|dbj|BAG08654.1| ribonucleoside-diphosphate reductase beta subunit [Finegoldia magna ATCC 29328] Length = 354 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +K E P L+T+E + + M+ + EI +A + + GL+ Sbjct: 226 RDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGAEAEIEWAKYVIGEKIQGLS 285 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK-NFFETRVTEYQ 117 E Y++++ N R +G ++ E P W+SE D K K +FFE + + Y Sbjct: 286 IKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIKTDFFEAKPSAYS 345 Query: 118 QGAELKWD 125 + A ++ D Sbjct: 346 KSAIIEDD 353 >gi|71033209|ref|XP_766246.1| ribonucleotide-diphosphate reductase small subunit [Theileria parva strain Muguga] gi|68353203|gb|EAN33963.1| ribonucleotide-diphosphate reductase small subunit, putative [Theileria parva] Length = 308 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 57/105 (54%), Gaps = 18/105 (17%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +FG + + +K + P ++ + ++ EA ++E +Y +++P +G+N Sbjct: 201 RDEGLHADFGCFIYHNLKHKLP-------EEAVQQIIKEAVVVERSYICDSLPCDLIGMN 253 Query: 62 A-----PSC-----EQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96 + C QY++F+A+R +G+ P++ T NPF WM Sbjct: 254 SRKKILTHCLIELMTQYIEFVADRLLQALGVRPVYNVT-NPFDWM 297 >gi|307151334|ref|YP_003886718.1| ribonucleotide reductase [Cyanothece sp. PCC 7822] gi|306981562|gb|ADN13443.1| ribonucleotide reductase [Cyanothece sp. PCC 7822] Length = 355 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 13/132 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I + PH K ++ M A E + + + +G+ Sbjct: 227 RDELSHVRLYQKIIAEAMQTFPHSVDKVYE-----MFDTAVHHECRWTNHIVGDNILGIT 281 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVT 114 S EQY +++AN R IGL+PL+ KY ++P+ + D KK+ NFFE VT Sbjct: 282 ESSTEQYTKYLANIRLKAIGLKPLYADEKYQKSPYSHLERFSDTKKDAHTKANFFEATVT 341 Query: 115 EYQQGAELK-WD 125 Y + + WD Sbjct: 342 SYVMSSGVTGWD 353 >gi|126654703|ref|ZP_01726237.1| hypothetical protein CY0110_09717 [Cyanothece sp. CCY0110] gi|126623438|gb|EAZ94142.1| hypothetical protein CY0110_09717 [Cyanothece sp. CCY0110] Length = 352 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 13/132 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I + + PH + ++ M A E + + + +G+ Sbjct: 224 RDELSHVRLYQKLIPEARKVFPHSVEQIYE-----MFDMAVNYECRWTNHIVGNNILGIT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVT 114 S E+Y +++AN R IGLEPL+ KY ++P+ + D KKE NFFE VT Sbjct: 279 ESSTEKYTKYLANIRLRSIGLEPLYPEPKYNKSPYTHLERFSDTKKEAHTKANFFEATVT 338 Query: 115 EYQQGAELK-WD 125 Y + + WD Sbjct: 339 SYVMSSGVTGWD 350 >gi|288554979|ref|YP_003426914.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus pseudofirmus OF4] gi|288546139|gb|ADC50022.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus pseudofirmus OF4] Length = 344 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH+ +V ++ E+P L +E + + L A LE+ + + + + G+ Sbjct: 216 RDEQLHVYLFTNVFKELLEEHPELNNREMESFVKQSLTTAVELELKWYNYIIGEQIEGVT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118 + Y++FIAN+R Q+G + +F ++ N F W+ D+ K +FFE + +Y + Sbjct: 276 SDEMGSYLKFIANKRAKQLGYDHIFPEHRTNVFKWIKAYEDVNAAKSDFFEQKSRQYAK 334 >gi|223983469|ref|ZP_03633655.1| hypothetical protein HOLDEFILI_00935 [Holdemania filiformis DSM 12042] gi|223964641|gb|EEF68967.1| hypothetical protein HOLDEFILI_00935 [Holdemania filiformis DSM 12042] Length = 348 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +++ E P L+T E +Q R ML + EI + + GLN Sbjct: 220 RDENTHLWLFRSMILELRKEEPQLFTPEREQLYREMLKQGVEEEIEWGCAILGDEIPGLN 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y++++ N R I LE L+ E W+S+ + K +FFE R + Y Sbjct: 280 KTMIRDYIRYLGNLRAKAIHLEILYPGEEEEPASMKWVSQYANANLIKTDFFEARSSAYA 339 Query: 118 QGAELKWD 125 + + LK D Sbjct: 340 KASALKDD 347 >gi|2465173|emb|CAA71741.1| ribonucleotide reductase (Class I) [Trypanosoma brucei brucei] Length = 337 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K + + ++ A +E + + +P +G+N Sbjct: 210 RDEGLHTDFACLLYEK------YIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G + + ++NPF +M ++I L+ + NFFE +V EYQ+ Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFM-DMISLQGKTNFFEKKVGEYQKAG 320 >gi|74025550|ref|XP_829341.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma brucei] gi|70834727|gb|EAN80229.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma brucei] gi|261335315|emb|CBH18309.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma brucei gambiense DAL972] Length = 337 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K + + ++ A +E + + +P +G+N Sbjct: 210 RDEGLHTDFACLLYEK------YIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G + + ++NPF +M ++I L+ + NFFE +V EYQ+ Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFM-DMISLQGKTNFFEKKVGEYQKAG 320 >gi|74025554|ref|XP_829343.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma brucei] gi|70834729|gb|EAN80231.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma brucei] Length = 337 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K + + ++ A +E + + +P +G+N Sbjct: 210 RDEGLHTDFACLLYEK------YIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G + + ++NPF +M ++I L+ + NFFE +V EYQ+ Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFM-DMISLQGKTNFFEKKVGEYQKAG 320 >gi|261335316|emb|CBH18310.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma brucei gambiense DAL972] Length = 337 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K + + ++ A +E + + +P +G+N Sbjct: 210 RDEGLHTDFACLLYEK------YIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G + + ++NPF +M ++I L+ + NFFE +V EYQ+ Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFM-DMISLQGKTNFFEKKVGEYQKAG 320 >gi|165969130|ref|YP_001651030.1| ribonucleotide reductase small subunit 2 [Orgyia leucostigma NPV] gi|164663626|gb|ABY65846.1| ribonucleotide reductase small subunit 2 [Orgyia leucostigma NPV] Length = 339 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 6/117 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH NF N+ E + + E M EA +E + +P +G+N Sbjct: 215 RDEGLHTNFACLYYNEYIDERDKMSSAEILD----MFVEAVNIEKEFFTSALPCDLLGMN 270 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + + +Y++F+A+R ++ +P T NPF +M+ I L+ + NFFE RV EY++ Sbjct: 271 SRAMCEYIEFVADRLLTELQ-QPKHFNTPNPFNFMNN-ISLEGKTNFFERRVGEYKR 325 >gi|3914640|sp|O15910|RIR2_TRYBB RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase R2 subunit; AltName: Full=Ribonucleotide reductase small subunit gi|2411479|gb|AAB70705.1| ribonucleotide reductase small subunit [Trypanosoma brucei] gi|261335314|emb|CBH18308.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma brucei gambiense DAL972] Length = 337 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K + + ++ A +E + + +P +G+N Sbjct: 210 RDEGLHTDFACLLYEK------YIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G + + ++NPF +M ++I L+ + NFFE +V EYQ+ Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFM-DMISLQGKTNFFEKKVGEYQKAG 320 >gi|319790519|ref|YP_004152152.1| ribonucleotide reductase [Thermovibrio ammonificans HB-1] gi|317115021|gb|ADU97511.1| ribonucleotide reductase [Thermovibrio ammonificans HB-1] Length = 352 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 5/100 (5%) Query: 31 QQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90 + K M A E ++ + + +G+N S E Y +IAN+R +GLEP+F Sbjct: 251 KDKIYDMFRIAVDQEQRFSKKVIGNKILGMNEQSIEDYTFYIANKRLKALGLEPIFPDRG 310 Query: 91 NPFPWMSEVIDLKKE----KNFFETRVTEYQQGAELK-WD 125 NP+ + + D E NFFE VT Y Q ++ WD Sbjct: 311 NPYEHLERIADTGGEANVKANFFEATVTSYNQANAVEGWD 350 >gi|172036555|ref|YP_001803056.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp. ATCC 51142] gi|171698009|gb|ACB50990.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp. ATCC 51142] Length = 352 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 13/132 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I + + PH + ++ M A E + + + +G+ Sbjct: 224 RDELSHVRLYQKLIPEARKVFPHSVEQIYE-----MFDMAVNYECRWTNHIVGNNILGIT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVT 114 S E+Y +++AN R IGLEPL+ KY ++P+ + D KKE NFFE VT Sbjct: 279 ESSTEKYTKYLANIRLRSIGLEPLYPEPKYNKSPYTHLERFSDTKKEAHTKANFFEATVT 338 Query: 115 EYQQGAELK-WD 125 Y + + WD Sbjct: 339 SYVMSSGVTGWD 350 >gi|164659270|ref|XP_001730759.1| hypothetical protein MGL_1758 [Malassezia globosa CBS 7966] gi|159104657|gb|EDP43545.1| hypothetical protein MGL_1758 [Malassezia globosa CBS 7966] Length = 397 Score = 55.1 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 9/124 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ EA +E + + +P +G+N Sbjct: 266 RDEGLHTDFACLLFS-------HLKKRAHPDTVNRIITEAVDIEQDFLTDALPVSLIGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G P + NPF +M E I L+ + NFFE RV +Y + Sbjct: 319 ARLMCQYIEFVADRLLVALG-NPKHYNSTNPFDFM-ENISLQGKSNFFERRVGDYAKAGV 376 Query: 122 LKWD 125 + D Sbjct: 377 ARAD 380 >gi|294782021|ref|ZP_06747353.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium sp. 1_1_41FAA] gi|294481832|gb|EFG29601.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium sp. 1_1_41FAA] Length = 344 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 8/126 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +IK + P ++ E +M A EI + + +G+ Sbjct: 216 RDELSHVVLFRSIVKEIKNDYPEFFSAE---TIYSMFKTAVEQEINWTEHIIGNRVLGIT 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116 + + E Y +++AN R +GLEPL+ + +NP+ + D + E NFFE VT Y Sbjct: 273 SQTTEVYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332 Query: 117 QQGAEL 122 + + Sbjct: 333 NMSSSI 338 >gi|16124515|ref|NP_419079.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter crescentus CB15] gi|221233200|ref|YP_002515636.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter crescentus NA1000] gi|13421393|gb|AAK22247.1| ribonucleoside-diphosphate reductase, beta subunit [Caulobacter crescentus CB15] gi|220962372|gb|ACL93728.1| ribonucleoside-diphosphate reductase beta chain [Caulobacter crescentus NA1000] Length = 347 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 2/121 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDESLH + I + + E + TK +E + G + G Sbjct: 198 IRDESLHCDGIIKLYHAFNKETGAV-TKAVADDIVDCCKTVVGMEDNFIDLAFEAGDIQG 256 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + + Y++F+A+ R Q+ L ++ ENP PW+ ++ + NFFE R TEY + Sbjct: 257 MTPDDIKAYIRFVADWRLRQLHLPEVYGVKENPLPWLQSLLSGVEHANFFEARATEYSKA 316 Query: 120 A 120 A Sbjct: 317 A 317 >gi|19074323|ref|NP_585829.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon cuniculi GB-M1] gi|51701822|sp|Q8SRR2|RIR2_ENCCU RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|19068965|emb|CAD25433.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon cuniculi GB-M1] Length = 325 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 11/118 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH F + H K+ + + ++ +A +E + E++P +G+N Sbjct: 202 RDEGLHCEFACLL---------HYHLKKKCNRIKEVVMDAVEIEKKFLSESLPVNLIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +Y++F+A+R +G E ++ T NPF +M E I L + NFF+ R ++YQ+ Sbjct: 253 CNLMCRYIEFVADRLLENLGEERVYNAT-NPFDFM-ENISLVGKTNFFDKRESQYQKA 308 >gi|71024571|ref|XP_762515.1| hypothetical protein UM06368.1 [Ustilago maydis 521] gi|46101992|gb|EAK87225.1| hypothetical protein UM06368.1 [Ustilago maydis 521] Length = 424 Score = 55.1 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 9/124 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ EA +E A+ E++P +G+N Sbjct: 289 RDEGLHTDFACLLFS-------HLRRRAHPDTVLKIITEAVEIEKAFLCESIPVALIGMN 341 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++++A+R +G P+ + PF +M+ I L+ + NFFE +V EY + Sbjct: 342 SKLMCQYIEYVADRLLVSLG-NPVHYGSTCPFDFMTN-ISLEGKTNFFEKKVAEYAKAGV 399 Query: 122 LKWD 125 + D Sbjct: 400 ARKD 403 >gi|323487827|ref|ZP_08093085.1| ribonucleotide-diphosphate reductase subunit beta [Planococcus donghaensis MPA1U2] gi|323398561|gb|EGA91349.1| ribonucleotide-diphosphate reductase subunit beta [Planococcus donghaensis MPA1U2] Length = 348 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 4/123 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F I + ENP L T E Q T + +A LE +A + GL+ Sbjct: 220 RDEMQHAYFIAQFIRIMLTENPELHTDENIQYIYTTIDKAVQLEKEWAQYILA-DIEGLD 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL---KKEKNFFETRVTEYQQ 118 +Y++++AN+R Q+GL+ L++ NP PW+ D + +FFE + Y + Sbjct: 279 LVEFGEYVEYLANKRLRQLGLDNLYEERSNPMPWIQVFGDDMMNDTKSDFFEQKSRTYTK 338 Query: 119 GAE 121 ++ Sbjct: 339 VSQ 341 >gi|166367085|ref|YP_001659358.1| ribonucleoside-diphosphate reductase beta chain [Microcystis aeruginosa NIES-843] gi|166089458|dbj|BAG04166.1| ribonucleoside-diphosphate reductase beta chain [Microcystis aeruginosa NIES-843] Length = 283 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 18/130 (13%) Query: 14 VINQIKIENPHLWTKEFQQKSRTMLHEAT----LLEIAYAHET------MPKGFVGLNAP 63 +IN+ ++ + L+ K + T H + + A HE + +G+ Sbjct: 152 MINRDELSHVRLYQKLIPEAMATFSHSVEQIYEMFDTAVKHECRWTNHIVGNDILGITEY 211 Query: 64 SCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVTEY 116 S EQY +++AN R IGLEPL+ KY ++P+ + D KKE NFFE VT Y Sbjct: 212 STEQYTKYLANIRLKAIGLEPLYREEKYNKSPYNHLERFSDTKKEGHTKANFFEATVTSY 271 Query: 117 QQGAELK-WD 125 + L WD Sbjct: 272 VMSSGLTGWD 281 >gi|78486104|ref|YP_392029.1| ribonucleotide-diphosphate reductase subunit beta [Thiomicrospira crunogena XCL-2] gi|78364390|gb|ABB42355.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Thiomicrospira crunogena XCL-2] Length = 377 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL+ +IN + ++P + KE ++K + EA E +A G Sbjct: 238 RDEALHLSGTQHLINILSEGKDDPEMMEIAKENEEKVYEIFREAAEQEKEWADYLFKDGS 297 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLNA + Y+++I N R I L P+F+ NP PWM+ Sbjct: 298 MIGLNASILKDYVEYITNTRIKAIKLNPIFENKSNPLPWMN 338 >gi|156564205|ref|YP_001429715.1| nrd beta subunit [Bacillus phage 0305phi8-36] gi|154622902|gb|ABS83782.1| nrd beta subunit [Bacillus phage 0305phi8-36] Length = 352 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 1/95 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +I ++ ENP L T+E Q L EA E +A E + GL+ Sbjct: 224 RDEMQHAYFIGLLIRRLLTENPELNTQENAQYIVDSLKEAVATEKEWAGEILAD-IEGLD 282 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96 + Y++++AN+R Q+G++ +++ NP PW+ Sbjct: 283 LEEFDHYIEYLANKRVRQLGMDNIYEERGNPMPWI 317 >gi|212693366|ref|ZP_03301494.1| hypothetical protein BACDOR_02879 [Bacteroides dorei DSM 17855] gi|237710423|ref|ZP_04540904.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp. 9_1_42FAA] gi|237726931|ref|ZP_04557412.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp. D4] gi|212664010|gb|EEB24584.1| hypothetical protein BACDOR_02879 [Bacteroides dorei DSM 17855] gi|229433787|gb|EEO43864.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides dorei 5_1_36/D4] gi|229455145|gb|EEO60866.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp. 9_1_42FAA] Length = 349 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 8/130 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L+T + + M+ E EI + + GLN Sbjct: 221 RDENTHLWLFRNIILELKKEEPDLFTPDKVKIYEYMMREGVKQEIEWGQYVIGDNIQGLN 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKKEK-NFFETRVTE 115 E Y+Q++ N R +G PL Y EN W+S+ + K +FFE + T Sbjct: 281 RKMIEDYIQYLGNLRWSSLGFGPL--YEENHKEPESMHWVSQYSNANMVKTDFFEAKSTA 338 Query: 116 YQQGAELKWD 125 Y + L+ D Sbjct: 339 YAKSTALEDD 348 >gi|150005609|ref|YP_001300353.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides vulgatus ATCC 8482] gi|254884474|ref|ZP_05257184.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp. 4_3_47FAA] gi|294778581|ref|ZP_06744003.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides vulgatus PC510] gi|319640834|ref|ZP_07995547.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp. 3_1_40A] gi|149934033|gb|ABR40731.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides vulgatus ATCC 8482] gi|254837267|gb|EET17576.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp. 4_3_47FAA] gi|294447530|gb|EFG16108.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides vulgatus PC510] gi|317387646|gb|EFV68512.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp. 3_1_40A] Length = 349 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 8/130 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L+T + + M+ E EI + + GLN Sbjct: 221 RDENTHLWLFRNIILELKKEEPDLFTPDKVKIYEYMMREGVKQEIEWGQYVIGDNIQGLN 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKKEK-NFFETRVTE 115 E Y+Q++ N R +G PL Y EN W+S+ + K +FFE + T Sbjct: 281 RKMIEDYIQYLGNLRWSSLGFGPL--YEENHKEPESMHWVSQYSNANMVKTDFFEAKSTA 338 Query: 116 YQQGAELKWD 125 Y + L+ D Sbjct: 339 YAKSTALEDD 348 >gi|255954081|ref|XP_002567793.1| Pc21g07530 [Penicillium chrysogenum Wisconsin 54-1255] gi|211589504|emb|CAP95650.1| Pc21g07530 [Penicillium chrysogenum Wisconsin 54-1255] Length = 400 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + H+ + + ++ EA +E + + +P +G+N Sbjct: 264 RDEGLHTDFACLLFS-------HMNHRPDPKVVEEIIVEAVGIEQEFLTDALPCALLGMN 316 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G + + + NPF +M E I L + NFFE RV +YQ+ Sbjct: 317 SKLMCQYIEFVADRLLVALGNKKYYN-SANPFDFM-ESISLAGKTNFFEKRVGDYQKAG 373 >gi|299144102|ref|ZP_07037182.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518587|gb|EFI42326.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 346 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E L+T+E + + ML E EI + + G+ Sbjct: 218 RDENTHLWLFRNIIQELKKEEVELFTEERINEYKCMLMEGVRQEIEWGQYVIGDNIQGIT 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117 A + Y++++ N R IG LF N W+SE + + K +FFE +V+ Y Sbjct: 278 AQMVKDYIEYLGNLRSRSIGFGNLFDRNIEEPNSMKWVSEYSNPNEIKTDFFEGKVSAYS 337 Query: 118 QGAELKWD 125 + + + D Sbjct: 338 KSSVFEDD 345 >gi|254523600|ref|ZP_05135655.1| ribonucleoside-diphosphate reductase, beta subunit [Stenotrophomonas sp. SKA14] gi|219721191|gb|EED39716.1| ribonucleoside-diphosphate reductase, beta subunit [Stenotrophomonas sp. SKA14] Length = 346 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I ENP L T E A LE ++ E + G G++ Sbjct: 218 RDELAHTKFISELIRAIIGENPELQTNELTAYVHQAFEHAIELETQWSSEVL-DGIDGID 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L+ T+N PW+ D + + +FFE R Y++ Sbjct: 277 VEEMTRYVKYRANKMAGMLGIERLYSDTTDNVMPWIKAYADNFTETKTDFFEMRNASYKK 336 >gi|229816571|ref|ZP_04446870.1| hypothetical protein COLINT_03629 [Collinsella intestinalis DSM 13280] gi|229807906|gb|EEP43709.1| hypothetical protein COLINT_03629 [Collinsella intestinalis DSM 13280] Length = 352 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +++ E P L++ E R ML E EIA+ + GL Sbjct: 224 RDENTHLWLFRSIILELQKEEPQLFSNENVTMLREMLEEGVRQEIAWGRYVLGDAIPGLT 283 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 E Y++++ N R +G L++ Y P W+S+ + K +FFE + T Y Sbjct: 284 GDMVEGYIKYLGNLRWSSLGFGQLYEGYRTEPADMAWVSQYSNANMVKTDFFEAKSTAYA 343 Query: 118 QGAEL 122 + L Sbjct: 344 KSTAL 348 >gi|228861726|ref|YP_002854746.1| Rr2 [Euproctis pseudoconspersa nucleopolyhedrovirus] gi|226425174|gb|ACO53586.1| Rr2 [Euproctis pseudoconspersa nucleopolyhedrovirus] Length = 339 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 6/117 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH NF N+ E+ L + ++ M EA +E + +P +G+N Sbjct: 215 RDEGLHTNFACLYYNEYIPEHDKLSS----ERILDMFIEAVEIEKEFFKTALPCSLLGMN 270 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 S +Y++F+A+R + +P NPF +M+ I ++ + NFFE RV EY++ Sbjct: 271 TESMCRYIEFVADRLLVDLN-QPKHFMASNPFNFMTN-ISMEGKTNFFERRVGEYRR 325 >gi|333030473|ref|ZP_08458534.1| ribonucleotide reductase [Bacteroides coprosuis DSM 18011] gi|332741070|gb|EGJ71552.1| ribonucleotide reductase [Bacteroides coprosuis DSM 18011] Length = 347 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +++ E P L+T E + R M+ E E+A+ + + GL Sbjct: 219 RDENTHLWLFQSIILELRKEEPQLFTVEAIAEFRAMIKEGAEQEMAWGEYVIEEEIEGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y++++AN RC +G E L+ Y + P W+++ + K +FFE + + Y Sbjct: 279 QEMVSDYIKYLANLRCENLGFEILYPGYEDEPASMSWVAQYSNANMIKTDFFEAKPSAYA 338 Query: 118 QGAEL 122 + + Sbjct: 339 KSTSI 343 >gi|50288235|ref|XP_446546.1| hypothetical protein [Candida glabrata CBS 138] gi|49525854|emb|CAG59473.1| unnamed protein product [Candida glabrata] Length = 335 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RD + +F + HL TK + ++ EA +E A+ +MP +G++ Sbjct: 202 RDRGFYADFACLLF-------AHLKTKPNPKIIEQIITEAVEIEKAHYRNSMPIEKLGMD 254 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +QY++ +A++ G E + T NPFP+M E + K NFFE +V++YQ+ + Sbjct: 255 LKEIDQYIESVADKLLVSFGNEKFYNAT-NPFPFMEEATSIGK-TNFFEKKVSDYQKAS 311 >gi|265756566|ref|ZP_06090772.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp. 3_1_33FAA] gi|263233754|gb|EEZ19369.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp. 3_1_33FAA] Length = 349 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 8/130 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L+T + + M+ E EI + + GLN Sbjct: 221 RDENTHLWLFRNIILELKKEEPDLFTPDKVKIYEYMMREGVKQEIEWGQYVIGDNIQGLN 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKKEK-NFFETRVTE 115 E Y+Q++ N R +G PL Y EN W+S+ + K +FFE + T Sbjct: 281 WKMIEDYIQYLGNLRWSSLGFGPL--YEENHKEPESMHWVSQYSNANMVKTDFFEAKSTA 338 Query: 116 YQQGAELKWD 125 Y + L+ D Sbjct: 339 YAKSTALEDD 348 >gi|294955280|ref|XP_002788462.1| ribonucleoside-diphosphate reductase small chain, putative [Perkinsus marinus ATCC 50983] gi|239903931|gb|EER20258.1| ribonucleoside-diphosphate reductase small chain, putative [Perkinsus marinus ATCC 50983] Length = 157 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 2/75 (2%) Query: 39 HEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE 98 + A +E + + +P G +G+NA +Y++F+A+R +G ++ + NPF WM+ Sbjct: 36 NSAVNVEREFITDALPVGLIGMNAELMGRYIEFVADRLLVALGYAKIYN-SANPFDWMT- 93 Query: 99 VIDLKKEKNFFETRV 113 +I L+ + NFFE RV Sbjct: 94 MISLQGKTNFFEKRV 108 >gi|167461830|ref|ZP_02326919.1| ribonucleoside-diphosphate reductase beta subunit [Paenibacillus larvae subsp. larvae BRL-230010] gi|322383591|ref|ZP_08057349.1| ribonucleotide-diphosphate reductase subunit beta-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152059|gb|EFX44995.1| ribonucleotide-diphosphate reductase subunit beta-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 343 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 4/123 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ H F +V + + P L T E Q + +A LE +AH + + G++ Sbjct: 215 RDEAQHAYFFGEVFKLLLTDFPELNTSERIQYVYDTIDQAVKLEEKWAHYVLNQ-IDGID 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID--LKKEK-NFFETRVTEYQQ 118 +Y++FIAN+R +GL+P ++ +N PW+ D L + K +FFE + Y + Sbjct: 274 LDDFSRYIRFIANKRLKTMGLQPAYEGVDNCMPWIRPFSDEALNQTKTDFFEAKSRTYAK 333 Query: 119 GAE 121 ++ Sbjct: 334 VSD 336 >gi|253574542|ref|ZP_04851883.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus sp. oral taxon 786 str. D14] gi|251846247|gb|EES74254.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus sp. oral taxon 786 str. D14] Length = 343 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 5/119 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ H F +V Q+ I+ P L TKE + + A LE +AH T+ K G++ Sbjct: 214 RDENQHCYFFAEVFKQLLIDYPELNTKENIDYAYRTIDRAVELETNWAHYTL-KNVPGID 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LKKEK-NFFETRVTEY 116 Y+++IAN+R +GLE + + N PW+ D L K +FFE + Y Sbjct: 273 LNELSDYIKYIANKRLTLMGLEKAYAGVDINCMPWIKPFSDEALNATKTDFFEAKSRNY 331 >gi|218442220|ref|YP_002380549.1| ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 7424] gi|218174948|gb|ACK73681.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 7424] Length = 355 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 13/132 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I + PH + ++ M A E + + + +G+ Sbjct: 227 RDELSHVRLYQRIIVEAMETFPHSVEQIYE-----MFDTAVQHECRWTNHIVGDNILGIT 281 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVT 114 S EQY +++AN R + IGL+PL+ KY ++P+ + D KK+ NFFE VT Sbjct: 282 ESSTEQYTKYLANHRLNTIGLKPLYEDEKYKKSPYSHLERFSDTKKDAHTKANFFEATVT 341 Query: 115 EYQQGAELK-WD 125 Y + + WD Sbjct: 342 SYVMSSGVTGWD 353 >gi|194366071|ref|YP_002028681.1| ribonucleotide-diphosphate reductase subunit beta [Stenotrophomonas maltophilia R551-3] gi|194348875|gb|ACF51998.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia R551-3] Length = 346 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I ENP L T E A LE ++ E + G G++ Sbjct: 218 RDELAHTKFISELIRAIIGENPELQTNELTAYVHQSFEHAIELETQWSSEVL-DGIDGID 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L+ T+N PW+ D + + +FFE R Y++ Sbjct: 277 VDEMVRYVKYRANKMAGMLGIERLYSDTTDNVMPWIKAYADNFTETKTDFFEMRNASYKK 336 >gi|73979723|ref|XP_856346.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase M2 chain (Ribonucleotide reductase small chain) isoform 3 [Canis familiaris] Length = 381 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 22/117 (18%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N Sbjct: 269 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIIINAVRIEQEFLTEALPVKLIGMN 321 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +QY++F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 322 CTLMKQYIEFVFR--------------VENPFDFM-ENISLEGKTNFFEKRVGEYQR 363 >gi|190574752|ref|YP_001972597.1| ribonucleotide-diphosphate reductase subunit beta [Stenotrophomonas maltophilia K279a] gi|190012674|emb|CAQ46302.1| putative ribonucleoside-diphosphate reductase beta chain [Stenotrophomonas maltophilia K279a] Length = 346 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I ENP L T E A LE ++ E + G G++ Sbjct: 218 RDELAHTKFISELIRAIIGENPELQTNELTAYVHQSFEHAIELETQWSSEVL-DGIDGID 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L+ T+N PW+ D + + +FFE R Y++ Sbjct: 277 VDEMVRYVKYRANKMAGMLGIERLYSDTTDNVMPWIKAYADNFTETKTDFFEMRNASYKK 336 >gi|255724924|ref|XP_002547391.1| ribonucleoside-diphosphate reductase small chain 1 [Candida tropicalis MYA-3404] gi|240135282|gb|EER34836.1| ribonucleoside-diphosphate reductase small chain 1 [Candida tropicalis MYA-3404] Length = 387 Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 11/120 (9%) Query: 2 RDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 RDE +H ++ + + ++ + +P + K ++ EA +E Y + +P +G+ Sbjct: 259 RDEGIHTDYACLLFSYLENKPDPSIIEK--------IITEAVSIEKKYFSDALPVSLLGM 310 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 N QY+++ A+R G + + T NPF +M E I L + NFFE RV++YQ+ Sbjct: 311 NCDLMCQYVEYCADRLLVAFGNDKYYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQRAG 368 >gi|326796346|ref|YP_004314166.1| ribonucleoside-diphosphate reductase [Marinomonas mediterranea MMB-1] gi|326547110|gb|ADZ92330.1| Ribonucleoside-diphosphate reductase [Marinomonas mediterranea MMB-1] Length = 377 Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q+ + EA E +A G Sbjct: 238 RDEALHLTGTQHMLNLMTSGKDDPEMAIIAQECRQEITDIFIEAAQQEKEWAKYLFKDGS 297 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLNA QY+++I+N R +GLEP F+ NP PW++ Sbjct: 298 MIGLNAEILGQYVEYISNVRMQAVGLEPAFETKSNPIPWIN 338 >gi|148244629|ref|YP_001219323.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Vesicomyosocius okutanii HA] gi|146326456|dbj|BAF61599.1| ribonucleoside-diphosphate reductase beta subunit [Candidatus Vesicomyosocius okutanii HA] Length = 378 Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 5/105 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + KE +++ TM EA E +A G Sbjct: 237 RDEALHLTGTQHILNLMSDGKDDPDMKKIAKECEKEVITMFKEACEQEKDWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101 +GLNA +QY+++I N R + L P+F NP PW++ +D Sbjct: 297 MIGLNAKMLKQYLEYITNVRMKALNLSPVFDECINPLPWINHWLD 341 >gi|237678830|emb|CAQ57557.1| NrdB protein [Bradyrhizobium elkanii] Length = 360 Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 32/147 (21%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58 +RDESLH GI I+ H W +E +R++ + ++++A + + FV Sbjct: 212 VRDESLHCE-GI-------IKLFHEWNRETGAVTRSVRDD--IVDVAKTMVKLEENFVDL 261 Query: 59 --------GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----------NPFPWMSEV 99 G+ Y++++A+ R Q+ + P+F + E +P PW+ E+ Sbjct: 262 AFGLGKIEGMRPEQIHTYVRYVADWRLTQLRIAPVFGFFEAKEGGFTQLKAHPLPWLVEI 321 Query: 100 IDLKKEKNFFETRVTEYQQGAEL-KWD 125 ++ + NFFE R TEY + A WD Sbjct: 322 LNGVEHANFFEQRATEYSKAASRGSWD 348 >gi|74025548|ref|XP_829340.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma brucei] gi|70834726|gb|EAN80228.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma brucei] Length = 337 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 63/119 (52%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K + + ++ A +E + + +P +G+N Sbjct: 210 RDEGLHTDFACLLYEK------YIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + QY++F+A+R +G + ++NPF +M ++I L+ + NFFE +V EYQ+ Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHCN-SKNPFDFM-DMISLQGKTNFFEKKVGEYQKAG 320 >gi|269468252|gb|EEZ79942.1| ribonucleotide-diphosphate reductase subunit beta [uncultured SUP05 cluster bacterium] Length = 319 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + KE + + M EA E +A G Sbjct: 177 RDEALHLTGTQHMLNLMRDGKDDPDMEKIAKECENEVIQMFKEACEQEKDWAEYLFRDGS 236 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101 +GLNA +QY+++I N R + +GL+P+F ++ NP PW++ +D Sbjct: 237 MIGLNADILKQYLEYITNVRMNALGLKPIFDEHVTNPLPWINSWLD 282 >gi|281204152|gb|EFA78348.1| ribonucleotide reductase-related protein [Polysphondylium pallidum PN500] Length = 323 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH F + ++ L K + +++ +A E + +++P +G+N Sbjct: 199 RDEGLHCQFACLLYSK-------LVNKLDAKTIESIIRDAVDCEKEFITQSLPVDLIGMN 251 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 +Y++F+A+ +G + ++ T NPF WM E+I + NFFE R T Y Sbjct: 252 NRLMSEYIEFVADHLIVALGYKKIYN-TANPFDWM-ELISIDTRTNFFEHRNTSY 304 >gi|297265423|ref|XP_001091447.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Macaca mulatta] Length = 704 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 2/61 (3%) Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 +G+N +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ Sbjct: 628 IGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQ 685 Query: 118 Q 118 + Sbjct: 686 R 686 >gi|315304277|ref|ZP_07874626.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria ivanovii FSL F6-596] gi|313627356|gb|EFR96140.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria ivanovii FSL F6-596] Length = 349 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T E + + A LE ++ E M +G G++ Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTDELVEYTHEAFRHAVELETEWSEEVM-QGIEGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 Y+++ AN+ +G+ L+ ++EN W+ D + + +FFE R + Y++ Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSENTMTWIKAYADNFTETKTDFFEMRNSSYKK 339 >gi|229495919|ref|ZP_04389645.1| ribonucleoside-diphosphate reductase, beta subunit [Porphyromonas endodontalis ATCC 35406] gi|229317232|gb|EEN83139.1| ribonucleoside-diphosphate reductase, beta subunit [Porphyromonas endodontalis ATCC 35406] Length = 346 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +++ E P L+T E + + M+ E L EIA+ + GL Sbjct: 218 RDENTHLWLFRSMILELRREQPELFTPEREAEFLEMIREGALQEIAWGKYVIGDEIEGLT 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 + Y+ ++AN R +GL +F + E P W+S+ + K +FFE + + Y Sbjct: 278 SQMVSDYIMYLANLRSANLGLGVIFPGHEEEPASMSWVSQYSNSNLIKTDFFEAKPSAYA 337 Query: 118 QGAELKWD 125 + A ++ D Sbjct: 338 KSASIEDD 345 >gi|53713986|ref|YP_099978.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides fragilis YCH46] gi|52216851|dbj|BAD49444.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides fragilis YCH46] Length = 349 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L+T + + M+ E EIA+ + GLN Sbjct: 221 RDENTHLWLFRNIILELKKEEPELFTPDKVKVYEEMMREGVKQEIAWGQYVIGDQIQGLN 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y+ F+ N R +G PL++ W+S+ + K +FFE + T Y Sbjct: 281 RQMISDYIHFLGNLRWSSLGYTPLYEDNRKEPESMHWVSQYSNANMVKTDFFEAKSTAYA 340 Query: 118 QGAELKWD 125 + L+ D Sbjct: 341 KSTALEDD 348 >gi|253567022|ref|ZP_04844473.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp. 3_2_5] gi|265764336|ref|ZP_06092904.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp. 2_1_16] gi|15290503|gb|AAK92210.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides fragilis 638R] gi|251944146|gb|EES84655.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp. 3_2_5] gi|263256944|gb|EEZ28290.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp. 2_1_16] gi|301163665|emb|CBW23219.1| putative ribonucleoside-diphosphate reductase beta chain [Bacteroides fragilis 638R] Length = 349 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L+T + + M+ E EIA+ + GLN Sbjct: 221 RDENTHLWLFRNIILELKKEEPELFTPDKVKVYEEMMREGVKQEIAWGQYVIGDQIQGLN 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y+ F+ N R +G PL++ W+S+ + K +FFE + T Y Sbjct: 281 RQMISDYIHFLGNLRWSSLGYTPLYEDNRKEPESMHWVSQYSNANMVKTDFFEAKSTAYA 340 Query: 118 QGAELKWD 125 + L+ D Sbjct: 341 KSTALEDD 348 >gi|323343338|ref|ZP_08083565.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella oralis ATCC 33269] gi|323095157|gb|EFZ37731.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella oralis ATCC 33269] Length = 349 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 8/130 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +++ ++K E P ++T E + M+ E EIA+ + GLN Sbjct: 221 RDENTHLWLFRNILQELKKEEPKMFTPEKVKVYEEMMREGVRQEIAWGQYVIGDEVPGLN 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKKEK-NFFETRVTE 115 Y+ ++ N R H +G L Y EN W+S+ + K +FFE + T Sbjct: 281 TKMVSDYIHYLGNLRWHSLGFGYL--YDENIQEPENMKWVSQYSNANMVKTDFFEAKSTA 338 Query: 116 YQQGAELKWD 125 Y + L+ D Sbjct: 339 YAKSTALEDD 348 >gi|60682187|ref|YP_212331.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides fragilis NCTC 9343] gi|60493621|emb|CAH08410.1| putative ribonucleoside-diphosphate reductase beta chain [Bacteroides fragilis NCTC 9343] Length = 349 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L+T + + M+ E EIA+ + GLN Sbjct: 221 RDENTHLWLFRNIILELKKEEPELFTPDKVKVYEEMMREGVKQEIAWGQYVIGDQIQGLN 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y+ F+ N R +G PL++ W+S+ + K +FFE + T Y Sbjct: 281 RQMISDYIHFLGNLRWSSLGYTPLYEDNRKEPESMHWVSQYSNANMVKTDFFEAKSTAYA 340 Query: 118 QGAELKWD 125 + L+ D Sbjct: 341 KSTALEDD 348 >gi|255008714|ref|ZP_05280840.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides fragilis 3_1_12] gi|313146449|ref|ZP_07808642.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides fragilis 3_1_12] gi|313135216|gb|EFR52576.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides fragilis 3_1_12] Length = 349 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 8/130 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L+T + + M+ E EI + + GLN Sbjct: 221 RDENTHLWLFRNIILELKKEEPELFTSDRVKVYEAMMREGVKQEIEWGQYVIGDEIQGLN 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKKEK-NFFETRVTE 115 E Y+ ++ N R +G PL Y +N W+S+ + K +FFE + T Sbjct: 281 KKMIEDYIHYLGNLRWTSLGFTPL--YEDNLKEPESMRWVSQYSNANMVKTDFFEAKSTA 338 Query: 116 YQQGAELKWD 125 Y + L+ D Sbjct: 339 YAKSTALEDD 348 >gi|309775830|ref|ZP_07670824.1| ribonucleoside-diphosphate reductase, beta subunit [Erysipelotrichaceae bacterium 3_1_53] gi|308916368|gb|EFP62114.1| ribonucleoside-diphosphate reductase, beta subunit [Erysipelotrichaceae bacterium 3_1_53] Length = 347 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +++ E PHL+T+E Q+ + ML EI + + GL Sbjct: 219 RDENTHLWLFRSMILELQKEEPHLFTEELIQEYKDMLRHGVEEEIRWGEYVIGNNIEGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y+ ++ N R + +G L++ E+ W+S + K +FFE R + Y Sbjct: 279 MEMVSDYIHYLGNLRSNSLGFGSLYEGFESEPKSMEWVSMYANANLIKTDFFEARSSAYA 338 Query: 118 QGAEL 122 + + L Sbjct: 339 KSSAL 343 >gi|303237757|ref|ZP_07324316.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella disiens FB035-09AN] gi|302482043|gb|EFL45079.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella disiens FB035-09AN] Length = 349 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L+T E M+ E EIA+ + GL Sbjct: 221 RDENTHLWLFRNIIVELKQEQPELFTPERIAVYEEMMREGVRQEIAWGQYVIGDKVQGLT 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y+ ++ N R +G L+++ +N W+++ + K K +FFE + T Y Sbjct: 281 QQMVADYIHYLGNLRWRSLGFGNLYEHNQNEPDDMQWVAQYSNANKVKTDFFEAKSTAYA 340 Query: 118 QGAEL 122 + L Sbjct: 341 KSTAL 345 >gi|329847182|ref|ZP_08262210.1| ribonucleotide reductase, small chain family protein [Asticcacaulis biprosthecum C19] gi|328842245|gb|EGF91814.1| ribonucleotide reductase, small chain family protein [Asticcacaulis biprosthecum C19] Length = 352 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 3/122 (2%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDESLH I + + E L TK Q +E + G V G Sbjct: 200 VRDESLHCEGIIKLYHAFAKETKAL-TKSVQDDIIDCCKTVVTMEDKFIDLAFEMGPVQG 258 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + + Y+++IA+ R Q+ L ++ ENP PW+ ++ + NFFE R TEY + Sbjct: 259 MTPDDIKAYIRYIADWRLRQLNLPEVYGGVKENPLPWLQVLLSGVEHANFFEARATEYSK 318 Query: 119 GA 120 A Sbjct: 319 AA 320 >gi|258648774|ref|ZP_05736243.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella tannerae ATCC 51259] gi|260851104|gb|EEX70973.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella tannerae ATCC 51259] Length = 350 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++ ++K E P ++T + R M+ + EI + + GL Sbjct: 222 RDENTHLWLFRSILLELKKEAPEMFTPDKVDVYRQMIAQGVEEEIKWGEYVLGDKIEGLT 281 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 + Y++++ N R +G +PL+ Y + P W+S+ + K +FFE R T Y Sbjct: 282 SEMIRDYIKYLGNLRTTSLGFDPLYDGYDKEPPSMSWVSQYSNANMIKTDFFEARSTAYA 341 Query: 118 QGAEL 122 + + L Sbjct: 342 KSSAL 346 >gi|299822182|ref|ZP_07054068.1| ribonucleotide-diphosphate reductase subunit beta [Listeria grayi DSM 20601] gi|299815711|gb|EFI82949.1| ribonucleotide-diphosphate reductase subunit beta [Listeria grayi DSM 20601] Length = 349 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T E + A LE ++ E M +G G++ Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTDELVAYTHDAFRHAVELETIWSEEVM-EGIEGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 Y+++ AN+ +G+ L+ ++EN W+ D + + +FFE R + Y++ Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSENTMTWIKAYADNFTETKTDFFEMRNSSYKK 339 >gi|308049658|ref|YP_003913224.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Ferrimonas balearica DSM 9799] gi|307631848|gb|ADN76150.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Ferrimonas balearica DSM 9799] Length = 378 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/101 (36%), Positives = 48/101 (47%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE LHL +IN + ++P + E +S + A E A+A G Sbjct: 239 RDEQLHLVGTQHMINLMADGRDDPEMAEIAIECHSESIEIFRRAAEQEKAWASYLFKDGS 298 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN E Y++FI N R IGL PLF NP PWMS Sbjct: 299 MLGLNKQIIEDYVEFITNERMAGIGLPPLFDKRSNPLPWMS 339 >gi|209523562|ref|ZP_03272116.1| ribonucleoside-diphosphate reductase beta chain [Arthrospira maxima CS-328] gi|209495967|gb|EDZ96268.1| ribonucleoside-diphosphate reductase beta chain [Arthrospira maxima CS-328] Length = 112 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 8/103 (7%) Query: 31 QQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---K 87 Q + M A E + + + +G+ S EQY +++AN R IGLE L+ K Sbjct: 8 QDRIYEMFDAAVQHECRWTNHIVGNNILGITEHSTEQYTKYLANIRLRSIGLESLYSDPK 67 Query: 88 YTENPFPWMSEVIDLKKE----KNFFETRVTEYQQGAELK-WD 125 Y ++P+ + D KKE NFFE VT Y + + WD Sbjct: 68 YQKSPYTHLERFSDTKKEAHTKANFFEASVTSYVMSSGVSGWD 110 >gi|71276518|ref|ZP_00652793.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Dixon] gi|71900741|ref|ZP_00682863.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1] gi|170729741|ref|YP_001775174.1| ribonucleotide-diphosphate reductase subunit beta [Xylella fastidiosa M12] gi|71162695|gb|EAO12422.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Dixon] gi|71729511|gb|EAO31620.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1] gi|167964534|gb|ACA11544.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa M12] Length = 349 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T A LE + E + G G++ Sbjct: 221 RDELAHTKFISEVIRAIVGENPELQTDALTDYVHQAFAHAIELETQWTGEVL-NGIDGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L+ + T+N PW+ D + + +FFE R Y++ Sbjct: 280 VEEMIRYVKYRANKMAGMLGIETLYTETTDNVMPWIRAYADNFTETKTDFFEMRNASYKK 339 >gi|319936387|ref|ZP_08010803.1| ribonucleotide-diphosphate reductase subunit beta [Coprobacillus sp. 29_1] gi|319808502|gb|EFW05054.1| ribonucleotide-diphosphate reductase subunit beta [Coprobacillus sp. 29_1] Length = 346 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 8/130 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I +++ E P L+T + + R M+ EIA+ + GL Sbjct: 218 RDENTHLWLFRNMILELQKEEPDLFTPDKIEVYRDMMKRGVEEEIAWGQYVLGDRIEGLT 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWM---SEVIDLKKEKNFFETRVTE 115 Y+ ++ N R + EPLF+ Y + P W+ S D+K + FFE R + Sbjct: 278 MKMVSDYIHYLGNFRAQALNFEPLFEDYMQEPESMKWVSIYSNANDIKTD--FFEARSSA 335 Query: 116 YQQGAELKWD 125 Y + + L+ D Sbjct: 336 YAKSSALEDD 345 >gi|170077010|ref|YP_001733648.1| ribonucleoside-diphosphate reductase, beta subunit [Synechococcus sp. PCC 7002] gi|169884679|gb|ACA98392.1| ribonucleoside-diphosphate reductase, beta subunit [Synechococcus sp. PCC 7002] Length = 352 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 8/97 (8%) Query: 37 MLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPF 93 M+ A E + + + +G+ S E Y +++AN R IGLEPL+K Y ++P+ Sbjct: 254 MVERAVQYECQWTNHIVGNDILGITEQSTEIYTKYLANIRLQAIGLEPLYKGDQYKKSPY 313 Query: 94 PWMSEVIDLKKE----KNFFETRVTEYQQGAELK-WD 125 + D KKE NFFE VT Y + + WD Sbjct: 314 RHLERFSDTKKEGNTKANFFEAGVTSYVMSSGITGWD 350 >gi|291570484|dbj|BAI92756.1| ribonucleoside-diphosphate reductase beta chain [Arthrospira platensis NIES-39] Length = 123 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 8/103 (7%) Query: 31 QQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---K 87 Q + M A E + + + +G+ S EQY +++AN R IGLE L+ K Sbjct: 19 QDRIYEMFDAAVQHECRWTNHIVGNNILGITEHSTEQYTKYLANIRLRSIGLESLYSDPK 78 Query: 88 YTENPFPWMSEVIDLKKE----KNFFETRVTEYQQGAELK-WD 125 Y ++P+ + D KKE NFFE VT Y + + WD Sbjct: 79 YQKSPYTHLERFSDTKKEAHTKANFFEASVTSYVMSSGVSGWD 121 >gi|239628850|ref|ZP_04671881.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239518996|gb|EEQ58862.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 347 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I ++K E P L+T + + ML E EI + + GL Sbjct: 219 RDENTHLWLFRSMIGELKKEEPGLFTPDNVKMLEDMLREGVSQEIEWGCYVIGDEVPGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y++++ N R +G EPL++ Y + P W+++ + K +FFE + T Y Sbjct: 279 KDMVSSYIKYLGNLRWTGLGFEPLYEGYGKEPESMAWVNQYSNANMVKTDFFEAKSTAYA 338 Query: 118 QGAEL 122 + A + Sbjct: 339 KSAAI 343 >gi|118197598|ref|YP_874310.1| ribonucleotide reductase small subunit [Ecotropis obliqua NPV] gi|113472593|gb|ABI35800.1| ribonucleotide reductase small subunit [Ecotropis obliqua NPV] Length = 341 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 6/117 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F N N L Q+ +M EA +E + +P +G+N Sbjct: 217 RDEGLHTDFACMYYNNYIPINEKL----SPQQILSMFIEAVDIEKEFFTTALPCYLLGIN 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 A +Y++F+A+R ++ +P T NPF +M+ I L+ + NFFE RV EY++ Sbjct: 273 ATEMCKYIEFVADRLLVELR-QPKHFNTPNPFNFMTN-ISLEGKTNFFERRVGEYKR 327 >gi|47213103|emb|CAF89523.1| unnamed protein product [Tetraodon nigroviridis] Length = 407 Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 22/117 (18%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K Q ++ A +E + E +P +G+N Sbjct: 295 RDEGLHCDFACLMFK-------HLLHKPSAQTVGAIIRNAVEIEQEFLTEALPVKLIGMN 347 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 ++Y++FI ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 348 CQLMKRYIEFIYR--------------AENPFDFM-ENISLEGKTNFFEKRVGEYQR 389 >gi|239993885|ref|ZP_04714409.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas macleodii ATCC 27126] Length = 376 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 21/113 (18%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTK------------EFQQKSRTMLHEATLLEIAYA 49 RDE+LHL+ ++N LW K E ++++R + A E +A Sbjct: 237 RDENLHLSSTQHILN--------LWAKGKDDPEMAQIAEECKEEARAIFMNAVEQEKQWA 288 Query: 50 HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101 G +GLN QY+++IAN+R IGL+ F+ + NP PWM+ ++ Sbjct: 289 DYLFQNGSMIGLNKEILCQYVEYIANQRMSAIGLDTPFEISSNPLPWMNNYLN 341 >gi|225568010|ref|ZP_03777035.1| hypothetical protein CLOHYLEM_04083 [Clostridium hylemonae DSM 15053] gi|225163184|gb|EEG75803.1| hypothetical protein CLOHYLEM_04083 [Clostridium hylemonae DSM 15053] Length = 355 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++ ++K E P L+ E + R M+ E EI + H + GL Sbjct: 227 RDENTHLWLFRSMLQELKKEEPQLFAAEDIKMYRQMIREGCEQEIRWGHYVIGDKIQGLT 286 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y++++ N RC +G E +++ Y P W+ + + K +FFE + T Y Sbjct: 287 KDMITSYIRYLGNLRCTGLGFERIYEGYDTIPESMRWVEQYSNANLIKTDFFEAKSTAYA 346 Query: 118 QGAEL 122 + + L Sbjct: 347 KSSAL 351 >gi|87120532|ref|ZP_01076426.1| ribonucleotide-diphosphate reductase beta subunit [Marinomonas sp. MED121] gi|86164175|gb|EAQ65446.1| ribonucleotide-diphosphate reductase beta subunit [Marinomonas sp. MED121] Length = 377 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + KE + ++ + EA E +A G Sbjct: 238 RDEALHLTGTQHILNLMASGKDDPEMEDIAKECEDEAYQIFFEAAEQEKEWASYLFKDGS 297 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLNA QY+++I N R IGL P F+ NP PW++ Sbjct: 298 MIGLNAQILGQYVEYITNIRMQAIGLLPTFETKHNPIPWIN 338 >gi|332141553|ref|YP_004427291.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas macleodii str. 'Deep ecotype'] gi|327551575|gb|AEA98293.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas macleodii str. 'Deep ecotype'] Length = 376 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 21/113 (18%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTK------------EFQQKSRTMLHEATLLEIAYA 49 RDE+LHL+ ++N LW K E ++++R + A E +A Sbjct: 237 RDENLHLSSTQHILN--------LWAKGKDDPEMAQIAQECKEEARAIFMNAVEQEKEWA 288 Query: 50 HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101 G +GLN QY+++IAN+R IGL+ F + NP PWM+ ++ Sbjct: 289 DYLFKTGSMIGLNKEILCQYVEYIANQRMSAIGLDTPFDISSNPLPWMNNYLN 341 >gi|260912588|ref|ZP_05919119.1| ribonucleoside-diphosphate reductase [Prevotella sp. oral taxon 472 str. F0295] gi|260633300|gb|EEX51459.1| ribonucleoside-diphosphate reductase [Prevotella sp. oral taxon 472 str. F0295] Length = 348 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I+++K E P +T E + M+ E EIA+ + GLN Sbjct: 220 RDENTHLWLFRNIIHEMKKEEPEYFTPEKVKLYEEMMREGVRQEIAWGQYVIGDEVQGLN 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y++++ N R +G LF+ E P W+S+ + K +FFE + T Y Sbjct: 280 GQMVNDYIRYLGNMRWRSLGFGNLFEDNIEEPENMRWVSQYANANMVKTDFFEAKSTAYA 339 Query: 118 QGAELKWD 125 + ++ D Sbjct: 340 KSTAIEDD 347 >gi|285016983|ref|YP_003374694.1| ribonucleotide-diphosphate reductase beta subunit protein [Xanthomonas albilineans GPE PC73] gi|283472201|emb|CBA14708.1| probable ribonucleotide-diphosphate reductase beta subunit protein [Xanthomonas albilineans] Length = 346 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I EN L T E A LE ++ E + G G++ Sbjct: 218 RDELAHTKFISELIRAIIGENAELQTNELTDYVHQAFEHAIRLETEWSSEVL-DGIEGID 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 QY+++ AN+ +G+E L+ ++N PW+ D + + +FFE R Y++ Sbjct: 277 VDEMIQYVKYRANKMSGMLGIEKLYTGASDNVMPWIKAYADNFTETKTDFFEMRNASYKK 336 >gi|153814165|ref|ZP_01966833.1| hypothetical protein RUMTOR_00374 [Ruminococcus torques ATCC 27756] gi|317499963|ref|ZP_07958199.1| ribonucleoside-diphosphate reductase [Lachnospiraceae bacterium 8_1_57FAA] gi|331087814|ref|ZP_08336739.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae bacterium 3_1_46FAA] gi|145848561|gb|EDK25479.1| hypothetical protein RUMTOR_00374 [Ruminococcus torques ATCC 27756] gi|316898680|gb|EFV20715.1| ribonucleoside-diphosphate reductase [Lachnospiraceae bacterium 8_1_57FAA] gi|330409509|gb|EGG88950.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae bacterium 3_1_46FAA] Length = 353 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I +++ E+P L+ + + +L EA EI +A + GLN Sbjct: 225 RDENTHLWLFRNIIIELRKEHPELFDDHMVSEMKELLMEAVRQEIEWACYVIGNEVPGLN 284 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y++++ N R +G P++ E W+S+ + K +FFE R T Y Sbjct: 285 EKMITDYIRYLGNLRWKSLGYAPIYPGCEREPETMKWVSQYSNANMVKTDFFEARSTAYA 344 Query: 118 QGAEL 122 + L Sbjct: 345 KSTAL 349 >gi|257462865|ref|ZP_05627271.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp. D12] Length = 348 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 9/130 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I +IK +++ R M A EI + + +G+ Sbjct: 220 RDELSHVVLFQKIIREIK---AENHNFFEEEEIRAMFRTAVEQEILWTEHIIGNRILGIT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKE----KNFFETRVTEY 116 + E Y +++AN R IGL P++ ++T+NP+ + D + + NFFE VT Y Sbjct: 277 TETTEAYTKWLANERLRTIGLAPMYEEFTKNPYKHLERFADTEGDGNVKSNFFEGTVTSY 336 Query: 117 QQGAELK-WD 125 + + WD Sbjct: 337 NMSSSIDGWD 346 >gi|319902178|ref|YP_004161906.1| ribonucleotide reductase [Bacteroides helcogenes P 36-108] gi|319417209|gb|ADV44320.1| ribonucleotide reductase [Bacteroides helcogenes P 36-108] Length = 347 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L+ + + M+ E EIA+ + GL+ Sbjct: 219 RDENTHLWLFRNIILELKKEEPELFVPDKVKVYEEMMREGVKQEIAWGQYVIGDNIQGLS 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117 E Y+ ++ N R +G PL++ + W+S+ + K +FFE + T Y Sbjct: 279 RKMLEDYIHYLGNLRWKSLGYAPLYEDNQTEPESMHWVSQYSNANMVKTDFFEAKSTAYA 338 Query: 118 QGAELKWD 125 + L+ D Sbjct: 339 KSTALEDD 346 >gi|317060491|ref|ZP_07924976.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium sp. D12] gi|313686167|gb|EFS23002.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium sp. D12] Length = 344 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 6/97 (6%) Query: 35 RTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPF 93 R M A EI + + +G+ + E Y +++AN R IGL P++ ++T+NP+ Sbjct: 246 RAMFRTAVEQEILWTEHIIGNRILGITTETTEAYTKWLANERLRTIGLAPMYEEFTKNPY 305 Query: 94 PWMSEVIDLKKE----KNFFETRVTEYQQGAELK-WD 125 + D + + NFFE VT Y + + WD Sbjct: 306 KHLERFADTEGDGNVKSNFFEGTVTSYNMSSSIDGWD 342 >gi|118602534|ref|YP_903749.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567473|gb|ABL02278.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 378 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 5/105 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + L +KE Q + TM EA E +A G Sbjct: 237 RDEALHLTGTQHMLNLMSSGKDDLDMQKISKECQDEVITMFREACEQEKDWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101 +GLNA +QY+++I N R + L +F NP PW++ +D Sbjct: 297 MIGLNAQILKQYLEYITNVRMKALNLSLIFDECTNPLPWINHWLD 341 >gi|317130866|ref|YP_004097148.1| ribonucleotide reductase [Bacillus cellulosilyticus DSM 2522] gi|315475814|gb|ADU32417.1| ribonucleotide reductase [Bacillus cellulosilyticus DSM 2522] Length = 345 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 31/122 (25%), Positives = 62/122 (50%), Gaps = 2/122 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ ++ E P L +++ + + + LEI +A + G++ Sbjct: 217 RDEQHHVYLFANIFKELMHEYPELNSEKTHRFVQETFKKGAELEINWAKYIIGDQMEGID 276 Query: 62 APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 E Y++F+AN+R +++G+E P Y NP W+ D+ K +FFE + +Y + Sbjct: 277 IGDLEAYIKFMANKRVNELGVERPFEGYRNNPMRWIKIYEDVNSGKTDFFEQKSRQYTKV 336 Query: 120 AE 121 ++ Sbjct: 337 SD 338 >gi|257454213|ref|ZP_05619483.1| ribonucleoside-diphosphate reductase, beta subunit [Enhydrobacter aerosaccus SK60] gi|257448386|gb|EEV23359.1| ribonucleoside-diphosphate reductase, beta subunit [Enhydrobacter aerosaccus SK60] Length = 377 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +IN Q ++P + ++ QQ++ + +A E A+A G Sbjct: 237 RDEALHLNGTQHMINLMQWGKDDPDMVEIAQDCQQQAIEIFKDAAEQEKAWAKYLFKNGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS 97 +GLN QY+++I N R IGL P+F + NP PW++ Sbjct: 297 MIGLNENILVQYVEYITNLRMDAIGLPPIFAAIKNNPIPWIN 338 >gi|15837799|ref|NP_298487.1| ribonucleotide-diphosphate reductase subunit beta [Xylella fastidiosa 9a5c] gi|28198393|ref|NP_778707.1| ribonucleotide-diphosphate reductase subunit beta [Xylella fastidiosa Temecula1] gi|9106169|gb|AAF84007.1|AE003954_4 ribonucleoside-diphosphate reductase beta chain [Xylella fastidiosa 9a5c] gi|28056463|gb|AAO28356.1| ribonucleoside-diphosphate reductase beta chain [Xylella fastidiosa Temecula1] Length = 346 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T A LE + E + G G++ Sbjct: 218 RDELAHTKFISEVIRAIVGENPELQTDALTDYVHQAFAHAIELETQWTGEVL-DGIDGID 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G++ L+ + T+N PW+ D + + +FFE R Y++ Sbjct: 277 VEEMIRYVKYRANKMAGMLGIQTLYTETTDNVMPWIRAYADNFTETKTDFFEMRNASYKK 336 >gi|46908387|ref|YP_014776.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes serotype 4b str. F2365] gi|47091823|ref|ZP_00229618.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes str. 4b H7858] gi|226224761|ref|YP_002758868.1| ribonucleoside-diphosphate reductase, subunit beta [Listeria monocytogenes Clip81459] gi|254825283|ref|ZP_05230284.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit NrdB [Listeria monocytogenes FSL J1-194] gi|254853280|ref|ZP_05242628.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit NrdB [Listeria monocytogenes FSL R2-503] gi|254931734|ref|ZP_05265093.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit NrdB [Listeria monocytogenes HPB2262] gi|255519998|ref|ZP_05387235.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes FSL J1-175] gi|300764038|ref|ZP_07074034.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes FSL N1-017] gi|46881658|gb|AAT04953.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes serotype 4b str. F2365] gi|47019834|gb|EAL10572.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes str. 4b H7858] gi|225877223|emb|CAS05937.1| Putative ribonucleoside-diphosphate reductase, subunit beta [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258606640|gb|EEW19248.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit NrdB [Listeria monocytogenes FSL R2-503] gi|293583289|gb|EFF95321.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit NrdB [Listeria monocytogenes HPB2262] gi|293594529|gb|EFG02290.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit NrdB [Listeria monocytogenes FSL J1-194] gi|300515379|gb|EFK42430.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes FSL N1-017] gi|313617790|gb|EFR90013.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria innocua FSL S4-378] gi|328465961|gb|EGF37142.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes 1816] gi|328472177|gb|EGF43048.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes 220] gi|332312605|gb|EGJ25700.1| Ribonucleoside-diphosphate reductase [Listeria monocytogenes str. Scott A] Length = 349 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T+E + + A LE ++ E + +G G++ Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHDAFRHAVELETEWSEEVL-QGIEGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++ Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339 >gi|71901120|ref|ZP_00683227.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1] gi|182681036|ref|YP_001829196.1| ribonucleotide-diphosphate reductase subunit beta [Xylella fastidiosa M23] gi|71729125|gb|EAO31249.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1] gi|182631146|gb|ACB91922.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa M23] gi|307579504|gb|ADN63473.1| ribonucleotide-diphosphate reductase subunit beta [Xylella fastidiosa subsp. fastidiosa GB514] Length = 349 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T A LE + E + G G++ Sbjct: 221 RDELAHTKFISEVIRAIVGENPELQTDALTDYVHQAFAHAIELETQWTGEVL-DGIDGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G++ L+ + T+N PW+ D + + +FFE R Y++ Sbjct: 280 VEEMIRYVKYRANKMAGMLGIQTLYTETTDNVMPWIRAYADNFTETKTDFFEMRNASYKK 339 >gi|313622843|gb|EFR93161.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria innocua FSL J1-023] Length = 349 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T+E + + A LE ++ E + +G G++ Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHDAFRHAVELETEWSEEVL-QGIEGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++ Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339 >gi|313607545|gb|EFR83848.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes FSL F2-208] Length = 187 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T+E + + A LE ++ E + +G G++ Sbjct: 59 RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWSEEVL-QGIEGID 117 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++ Sbjct: 118 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 177 >gi|16801322|ref|NP_471590.1| ribonucleotide-diphosphate reductase subunit beta [Listeria innocua Clip11262] gi|16414770|emb|CAC97486.1| lin2258 [Listeria innocua Clip11262] Length = 349 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T+E + + A LE ++ E + +G G++ Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHDAFRHAVELETEWSEEVL-QGIEGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++ Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339 >gi|160937686|ref|ZP_02085046.1| hypothetical protein CLOBOL_02576 [Clostridium bolteae ATCC BAA-613] gi|158439331|gb|EDP17083.1| hypothetical protein CLOBOL_02576 [Clostridium bolteae ATCC BAA-613] Length = 347 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +++ E P L+T + R+ML E EI + + GL Sbjct: 219 RDENTHLWLFRSMIAELRKEEPQLFTPKMVDMLRSMLEEGVAQEIQWGCYVIGDDVPGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y++++ N R +G L++ Y E P W+++ + K +FFE + T Y Sbjct: 279 REMVTDYIRYLGNLRWSGLGFGTLYEGYDEEPQSMKWVNQYSNANMVKTDFFEAKSTAYA 338 Query: 118 QGAEL 122 + A + Sbjct: 339 KSAAI 343 >gi|326565416|gb|EGE15593.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella catarrhalis 103P14B1] Length = 376 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +IN ++ ++P + + Q+++ + A E A+A+ G Sbjct: 237 RDEALHLNGTQHMINLMRQGRDDPDMVAIAEACQEEAIEIFKSAAEQEKAWANYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY++FI N R IGL +F+ NP PW++ Sbjct: 297 MIGLNRDILCQYIEFITNTRMSAIGLPAIFETKTNPIPWIN 337 >gi|289435502|ref|YP_003465374.1| ribonucleoside-diphosphate reductase beta chain [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171746|emb|CBH28292.1| ribonucleoside-diphosphate reductase beta chain [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|313632343|gb|EFR99385.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria seeligeri FSL N1-067] gi|313636848|gb|EFS02469.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria seeligeri FSL S4-171] Length = 349 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T+E + + A LE ++ E + +G G++ Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVDLETEWSEEVL-QGIEGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++ Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339 >gi|326560111|gb|EGE10501.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella catarrhalis 46P47B1] gi|326564174|gb|EGE14410.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella catarrhalis 12P80B1] gi|326573404|gb|EGE23372.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella catarrhalis 101P30B1] Length = 376 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +IN ++ ++P + + Q+++ + A E A+A+ G Sbjct: 237 RDEALHLNGTQHMINLMRQGRDDPDMVAIAEACQEEAIEIFKSAAEQEKAWANYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY++FI N R IGL +F+ NP PW++ Sbjct: 297 MIGLNRDILCQYIEFITNTRMSAIGLPAIFETKTNPIPWIN 337 >gi|326560494|gb|EGE10876.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella catarrhalis 7169] gi|326570427|gb|EGE20467.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella catarrhalis BC8] gi|326575699|gb|EGE25622.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella catarrhalis CO72] gi|326577166|gb|EGE27060.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella catarrhalis O35E] Length = 376 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +IN ++ ++P + + Q+++ + A E A+A+ G Sbjct: 237 RDEALHLNGTQHMINLMRQGRDDPDMVAIAEACQEEAIEIFKSAAEQEKAWANYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY++FI N R IGL +F+ NP PW++ Sbjct: 297 MIGLNRDILCQYIEFITNTRMSAIGLPAIFETKTNPIPWIN 337 >gi|255023762|ref|ZP_05295748.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes FSL J1-208] Length = 284 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T E + + A LE ++ E + +G G++ Sbjct: 156 RDELAHSKFISEVIRAILGENPELQTDELVEYTHDAFRHAVELETEWSEEVL-QGIEGID 214 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++ Sbjct: 215 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 274 >gi|296113118|ref|YP_003627056.1| ribonucleoside-diphosphate reductase 1 subunit beta [Moraxella catarrhalis RH4] gi|295920812|gb|ADG61163.1| ribonucleoside-diphosphate reductase 1 subunit beta [Moraxella catarrhalis RH4] Length = 380 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +IN ++ ++P + + Q+++ + A E A+A+ G Sbjct: 241 RDEALHLNGTQHMINLMRQGRDDPDMVAIAEACQEEAIEIFKSAAEQEKAWANYLFKDGS 300 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY++FI N R IGL +F+ NP PW++ Sbjct: 301 MIGLNRDILCQYIEFITNTRMSAIGLPAIFETKTNPIPWIN 341 >gi|16804193|ref|NP_465678.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes EGD-e] gi|116873587|ref|YP_850368.1| ribonucleotide-diphosphate reductase subunit beta [Listeria welshimeri serovar 6b str. SLCC5334] gi|217963685|ref|YP_002349363.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes HCC23] gi|224500181|ref|ZP_03668530.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes Finland 1988] gi|224501047|ref|ZP_03669354.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes FSL R2-561] gi|254826956|ref|ZP_05231643.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit NrdB [Listeria monocytogenes FSL N3-165] gi|254831409|ref|ZP_05236064.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes 10403S] gi|255028522|ref|ZP_05300473.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes LO28] gi|284802601|ref|YP_003414466.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes 08-5578] gi|284995743|ref|YP_003417511.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes 08-5923] gi|290893101|ref|ZP_06556089.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit NrdB [Listeria monocytogenes FSL J2-071] gi|16411624|emb|CAD00232.1| lmo2154 [Listeria monocytogenes EGD-e] gi|116742465|emb|CAK21589.1| ribonucleoside-diphosphate reductase beta chain [Listeria welshimeri serovar 6b str. SLCC5334] gi|217332955|gb|ACK38749.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes HCC23] gi|258599337|gb|EEW12662.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit NrdB [Listeria monocytogenes FSL N3-165] gi|284058163|gb|ADB69104.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes 08-5578] gi|284061210|gb|ADB72149.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes 08-5923] gi|290557263|gb|EFD90789.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit NrdB [Listeria monocytogenes FSL J2-071] gi|307571740|emb|CAR84919.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes L99] Length = 349 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T+E + + A LE ++ E + +G G++ Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWSEEVL-QGIEGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++ Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339 >gi|47095728|ref|ZP_00233334.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes str. 1/2a F6854] gi|254899145|ref|ZP_05259069.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes J0161] gi|254912714|ref|ZP_05262726.1| ribonucleoside-diphosphate reductase [Listeria monocytogenes J2818] gi|254937041|ref|ZP_05268738.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit NrdB [Listeria monocytogenes F6900] gi|47015871|gb|EAL06798.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes str. 1/2a F6854] gi|258609644|gb|EEW22252.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit NrdB [Listeria monocytogenes F6900] gi|293590709|gb|EFF99043.1| ribonucleoside-diphosphate reductase [Listeria monocytogenes J2818] Length = 349 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T+E + + A LE ++ E + +G G++ Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWSEEVL-QGIEGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++ Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339 >gi|310639978|ref|YP_003944736.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus polymyxa SC2] gi|309244928|gb|ADO54495.1| Ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus polymyxa SC2] Length = 343 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 5/119 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ H F +V Q+ + P L TKE M++ A LE +AH T+ K G++ Sbjct: 214 RDENQHCYFFAEVFKQLLADFPELNTKENMDYVYRMINRAVELETNWAHYTL-KEVRGID 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LKKEK-NFFETRVTEY 116 Y++++AN R +G++ ++ + N PW+ D L K +FFE + Y Sbjct: 273 LNELSDYIKYMANMRLRLLGMDKAYEGVDINSMPWIKPFSDEALNATKTDFFEAKSRNY 331 >gi|255018022|ref|ZP_05290148.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes FSL F2-515] Length = 267 Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T+E + + A LE ++ E + +G G++ Sbjct: 139 RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWSEEVL-QGIEGID 197 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++ Sbjct: 198 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 257 >gi|109898789|ref|YP_662044.1| ribonucleotide-diphosphate reductase subunit beta [Pseudoalteromonas atlantica T6c] gi|109701070|gb|ABG40990.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Pseudoalteromonas atlantica T6c] Length = 376 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 21/113 (18%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTK------------EFQQKSRTMLHEATLLEIAYA 49 RDE+LHL ++N LW K E+++++ + +A E +A Sbjct: 237 RDENLHLTSTQHILN--------LWAKGKDDPEMAEIALEYKEEATNIFLDAVNQEKEWA 288 Query: 50 HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101 G +GLN QY++FIAN R IGL+ F NP PWM+ ++ Sbjct: 289 EYLFQNGSMIGLNKDILCQYVEFIANHRMSAIGLDQPFDIKNNPLPWMNNYLN 341 >gi|332306884|ref|YP_004434735.1| Ribonucleoside-diphosphate reductase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174213|gb|AEE23467.1| Ribonucleoside-diphosphate reductase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 376 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 21/113 (18%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTK------------EFQQKSRTMLHEATLLEIAYA 49 RDE+LHL ++N LW K E++Q++ + +A E +A Sbjct: 237 RDENLHLTSTQHILN--------LWAKGKDDPEMAEIAIEYKQQATDIFLDAVNQEKEWA 288 Query: 50 HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101 G +GLN QY++FIAN R IGL F NP PWM+ ++ Sbjct: 289 EYLFQNGSMIGLNKDILCQYVEFIANHRMSAIGLGQPFDIKNNPLPWMNNYLN 341 >gi|315283233|ref|ZP_07871471.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria marthii FSL S4-120] gi|313613124|gb|EFR87028.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria marthii FSL S4-120] Length = 349 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T E + + A LE ++ E + +G G++ Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTDELVEYTHEAFRHAVELETEWSEEVL-QGIEGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++ Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339 >gi|167756571|ref|ZP_02428698.1| hypothetical protein CLORAM_02108 [Clostridium ramosum DSM 1402] gi|237733862|ref|ZP_04564343.1| ribonucleotide-diphosphate reductase subunit beta [Mollicutes bacterium D7] gi|167702746|gb|EDS17325.1| hypothetical protein CLORAM_02108 [Clostridium ramosum DSM 1402] gi|229382943|gb|EEO33034.1| ribonucleotide-diphosphate reductase subunit beta [Coprobacillus sp. D7] Length = 346 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I +++ E P L+T E + R ML EIA+ + GL Sbjct: 218 RDENTHLWLFRNMIIELQKEEPTLFTPEKIEVYRNMLKRGVEEEIAWGQYVLGNRIEGLT 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y+ ++ N R + EPL++ E W+S + K +FFE + T Y Sbjct: 278 MDMVSDYIHYLGNLRAFSLNFEPLYEGFETEPEAMKWVSIYSNANNIKTDFFEAKSTAYA 337 Query: 118 QGAELKWD 125 + + ++ D Sbjct: 338 KSSAIEDD 345 >gi|260591988|ref|ZP_05857446.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella veroralis F0319] gi|260536272|gb|EEX18889.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella veroralis F0319] Length = 348 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 6/126 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I ++K E P ++T+E + M+ E EIA+ + GLN Sbjct: 220 RDENTHLWLFRSIILELKKEEPDMFTEEKVKVYEDMMREGVRQEIAWGQYVIGNDVQGLN 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF----KYTENPFPWMSEVIDLKKEK-NFFETRVTEY 116 + Y++++ N R +G L+ K EN W+ + + K +FFE R T Y Sbjct: 280 SQMVSDYIRYLGNLRWSGLGFGFLYPDNQKEPEN-MKWVGQYSNANMVKTDFFEARSTAY 338 Query: 117 QQGAEL 122 + L Sbjct: 339 AKSTAL 344 >gi|152997008|ref|YP_001341843.1| ribonucleotide-diphosphate reductase subunit beta [Marinomonas sp. MWYL1] gi|150837932|gb|ABR71908.1| Ribonucleoside-diphosphate reductase [Marinomonas sp. MWYL1] Length = 377 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + E Q + R + EA E +A G Sbjct: 238 RDEALHLTGTQHMLNLMASGKDDPEMAVIAAECQDEVRQIFIEAAEQEKEWATYLFKDGS 297 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLNA QY+++I N R +GLE F NP PW++ Sbjct: 298 MIGLNAQILGQYVEYITNVRMQAVGLETCFATKHNPIPWIN 338 >gi|122921307|pdb|2O1Z|A Chain A, Plasmodium Vivax Ribonucleotide Reductase Subunit R2 (Pv086155) gi|122921308|pdb|2O1Z|B Chain B, Plasmodium Vivax Ribonucleotide Reductase Subunit R2 (Pv086155) Length = 311 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 53/95 (55%), Gaps = 8/95 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ + P ++ + ++ EA +E ++ E++P +G+N Sbjct: 223 RDEGLHTDFNCLIYSLLENKLP-------EEVVQNIVKEAVEVERSFICESLPCDLIGMN 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96 + QY++F+A+R +G +F + +NPF WM Sbjct: 276 SRLMSQYIEFVADRLLECLGSPKIF-HAKNPFNWM 309 >gi|146312444|ref|YP_001177518.1| ribonucleotide-diphosphate reductase subunit beta [Enterobacter sp. 638] gi|145319320|gb|ABP61467.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Enterobacter sp. 638] Length = 376 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + +E +Q+ + A L E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVLAALQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GLE FK NP PW++ Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLELPFKTRSNPIPWIN 337 >gi|49237365|ref|YP_031646.1| ribonucleoside diphosphate reductase beta subunit-like protein [Frog virus 3] gi|47060183|gb|AAT09727.1| ribonucleoside diphosphate reductase beta subunit-like protein [Frog virus 3] Length = 387 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 10/127 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEF-----QQKSRTMLHEATLLEIAYAHETMPK 55 +RDE++H+ + + E P + TK+ + R E +++A+ E P Sbjct: 252 VRDENIHVEGVSKLFETLNSEYPWVVTKDLIELFKEDAERVAELEEAFVDLAF-QECGP- 309 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDLKKEKNFFETRV 113 GL + Y+ ++ N R +GL L + P PW+ +ID NFFE V Sbjct: 310 -VCGLEPKQVKDYVLYVINLRAANMGLPKLIERAPEACPIPWVKWLIDGADLTNFFENHV 368 Query: 114 TEYQQGA 120 TEY+ G Sbjct: 369 TEYETGG 375 >gi|326564074|gb|EGE14316.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella catarrhalis 103P14B1] gi|326570555|gb|EGE20595.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella catarrhalis BC8] gi|326573198|gb|EGE23167.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella catarrhalis CO72] Length = 361 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 14/104 (13%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEA-TLLEIAYAHETM------- 53 RDE+LHLN ++ + E+ +++Q ++T E + E AY E Sbjct: 225 RDEALHLNGTQHILTLLVKEH-----EDYQTITQTCKDEIYDIFESAYEQERAWIDYLFK 279 Query: 54 PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+Q+I + R IGLEP+F T+NP PW++ Sbjct: 280 DGSMIGLNKEILTQYLQYITDIRMSAIGLEPVFN-TKNPIPWIN 322 >gi|326567429|gb|EGE17544.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella catarrhalis BC1] Length = 361 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 14/104 (13%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEA-TLLEIAYAHETM------- 53 RDE+LHLN ++ + E+ +++Q ++T E + E AY E Sbjct: 225 RDEALHLNGTQHILTLLVKEH-----EDYQTITQTCKDEIYDIFESAYEQERAWIDYLFK 279 Query: 54 PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+Q+I + R IGLEP+F T+NP PW++ Sbjct: 280 DGSMIGLNKEILTQYLQYITDIRMSAIGLEPVFN-TKNPIPWIN 322 >gi|27375117|ref|NP_766646.1| ribonucleotide-diphosphate reductase subunit beta [Bradyrhizobium japonicum USDA 110] gi|27348253|dbj|BAC45271.1| ribonucleoside-diphosphate reductase beta subunit [Bradyrhizobium japonicum USDA 110] Length = 360 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 32/147 (21%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58 +RDESLH GI I+ H W +E +R + + ++++A + + FV Sbjct: 212 VRDESLHCE-GI-------IKLFHEWHRETGAVTRPVRDD--IVDVAKTMVKLEENFVEL 261 Query: 59 --------GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----------NPFPWMSEV 99 G+ Y++++A+ R Q+ + P+F + E +P PW+ E+ Sbjct: 262 AFGLGKIEGMLPEHIHAYVRYVADWRLAQLRIAPVFGFFEAKEGGFTQLKAHPLPWLVEI 321 Query: 100 IDLKKEKNFFETRVTEYQQGAEL-KWD 125 ++ + NFFE R TEY + A WD Sbjct: 322 LNGVEHANFFEQRATEYSKAASRGSWD 348 >gi|170587050|ref|XP_001898292.1| ribonucleotide reductase 2 [Brugia malayi] gi|158594687|gb|EDP33271.1| ribonucleotide reductase 2, putative [Brugia malayi] Length = 288 Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 51/91 (56%), Gaps = 2/91 (2%) Query: 32 QKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN 91 +K +M + + Y E +P +G+N QY++++A+ ++ ++ +++N Sbjct: 186 KKFTSMFNACIDAKQEYLTEALPVDLIGINCKLMCQYIEYVADHLLTELHCAKIY-HSDN 244 Query: 92 PFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122 PF +M E I ++ + NFFE RV+EYQ+ L Sbjct: 245 PFDFM-ERISIEAKTNFFEKRVSEYQKAGVL 274 >gi|261404531|ref|YP_003240772.1| Ribonucleoside-diphosphate reductase [Paenibacillus sp. Y412MC10] gi|261280994|gb|ACX62965.1| Ribonucleoside-diphosphate reductase [Paenibacillus sp. Y412MC10] Length = 343 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 5/119 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ H F +V Q+ + P L TKE + A LE +AH T+ G++ Sbjct: 214 RDENQHCYFFAEVFKQLLKDFPELNTKENIDYLYRTIDRAVELETNWAHYTL-SNVRGID 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LKKEK-NFFETRVTEY 116 Y+++IANRR +GLE ++ + N PW+ D L K +FFE + Y Sbjct: 273 LNELSDYIKYIANRRITMMGLEKAYEGVDVNCMPWIKPFSDEALNATKTDFFEAKSRNY 331 >gi|288928561|ref|ZP_06422408.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp. oral taxon 317 str. F0108] gi|288331395|gb|EFC69979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp. oral taxon 317 str. F0108] Length = 348 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I+++K E P +T E + M+ E EIA+ + GLN Sbjct: 220 RDENTHLWLFRNIIHEMKKEEPEYFTPEKVKVYEEMMREGVRQEIAWGQYVIGDEVQGLN 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 A Y++++ N R +G L + E P W+++ + K +FFE + T Y Sbjct: 280 AQMVNDYIRYLGNMRWRSLGFGNLLEDNIEEPENMRWVAQYANANMVKTDFFEAKSTAYA 339 Query: 118 QGAELKWD 125 + ++ D Sbjct: 340 KSTAIEDD 347 >gi|228861279|ref|YP_002854302.1| ribonucleotide reductase small subunit [Soft-shelled turtle iridovirus] gi|45550045|gb|AAS67856.1| ribonucleotide reductase small subunit [Rana grylio virus 9506] gi|194307559|gb|ACF42289.1| ribonucleotide reductase small subunit [Soft-shelled turtle iridovirus] Length = 387 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 10/127 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEF-----QQKSRTMLHEATLLEIAYAHETMPK 55 +RDE++H+ + + E P + TK+ + R E +++A+ E P Sbjct: 252 VRDENIHVEGVSKLFETLNSEYPWVVTKDLIELFKEDAERVAELEEAFVDLAF-QECGP- 309 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDLKKEKNFFETRV 113 GL + Y+ ++ N R +GL L + P PW+ +ID NFFE V Sbjct: 310 -VCGLEPKQVKDYVLYVINLRAANMGLPKLIERAPEACPIPWVKWLIDGADLTNFFENHV 368 Query: 114 TEYQQGA 120 TEY+ G Sbjct: 369 TEYETGG 375 >gi|329922162|ref|ZP_08277907.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus sp. HGF5] gi|328942352|gb|EGG38619.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus sp. HGF5] Length = 370 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 5/119 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ H F +V Q+ + P L TKE + A LE +AH T+ G++ Sbjct: 241 RDENQHCYFFAEVFKQLLKDFPELNTKENIDYLYRTIDRAVELETNWAHYTL-SNVRGID 299 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LKKEK-NFFETRVTEY 116 Y+++IANRR +GLE ++ + N PW+ D L K +FFE + Y Sbjct: 300 LNELSDYIKYIANRRITMMGLEKAYEGVDVNCMPWIKPFSDEALNATKTDFFEAKSRNY 358 >gi|332708567|ref|ZP_08428541.1| ribonucleotide reductase, beta subunit [Lyngbya majuscula 3L] gi|332352664|gb|EGJ32230.1| ribonucleotide reductase, beta subunit [Lyngbya majuscula 3L] Length = 344 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 8/97 (8%) Query: 37 MLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPF 93 M A E + + + +G+ S E Y +++AN R IGL+PL+K Y ++P+ Sbjct: 246 MFATAVEHECRWTNHIVGNDILGITERSTEHYTKYLANIRLRSIGLDPLYKGENYQKSPY 305 Query: 94 PWMSEVIDLKKE----KNFFETRVTEYQQGAELK-WD 125 + D KK+ NFFE VT Y + + WD Sbjct: 306 SHLERFSDTKKDAHTKANFFEASVTSYVMSSGVSGWD 342 >gi|70937204|ref|XP_739440.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56516443|emb|CAH87750.1| hypothetical protein PC302623.00.0 [Plasmodium chabaudi chabaudi] Length = 72 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 37/55 (67%), Gaps = 2/55 (3%) Query: 66 EQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY++F+A+R +G +F +++NPF WM ++I L+ + NFFE RV +YQ+ Sbjct: 4 SQYIEFVADRLLECLGCSKVF-HSKNPFSWM-DLISLQGKTNFFEKRVADYQKSG 56 >gi|221134587|ref|ZP_03560892.1| ribonucleotide-diphosphate reductase subunit beta [Glaciecola sp. HTCC2999] Length = 376 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 5/105 (4%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL V+N ++P + KE +Q++R + A E +A G Sbjct: 237 RDENLHLTSTQHVLNLWAKGKDDPEMAEIAKECEQEARDIFLNAVQQEKEWAAFLFNNGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101 +GLN Y+++IAN+R IGL F + NP PWM+ ++ Sbjct: 297 MIGLNEEILCSYVEYIANQRMAAIGLGQPFDVSSNPLPWMNNYLN 341 >gi|168702485|ref|ZP_02734762.1| ribonucleotide-diphosphate reductase small chain [Gemmata obscuriglobus UQM 2246] Length = 70 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 2/62 (3%) Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 GL+ Y ++ A+RR +G+ P+F T+NPF +M ++ D+++ NFFE RV+ YQ Sbjct: 2 AGLSCRDLRSYPEYAADRRLESLGIAPVFG-TKNPFGFM-DLQDVQELTNFFERRVSAYQ 59 Query: 118 QG 119 G Sbjct: 60 LG 61 >gi|326784150|ref|YP_004324543.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn1] gi|310004882|gb|ADO99273.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn1] Length = 395 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 6/100 (6%) Query: 2 RDESLHLNFGIDVINQIK-IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 RDES H+ +++N+ K ++P + +E ++ M ++ E+ +A G Sbjct: 255 RDESQHMTITQNILNKWKQGDDPDMVEIAQEEEKNVYEMFNKCVEEEVIWADYLFRDGSM 314 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFK--YTENPFPW 95 +GLNA ++Y+++ ANRR IGL+P F + NP PW Sbjct: 315 IGLNAKLLQKYVEWTANRRMKSIGLKPTFDAPLSNNPLPW 354 >gi|297724673|ref|NP_001174700.1| Os06g0257450 [Oryza sativa Japonica Group] gi|255676900|dbj|BAH93428.1| Os06g0257450 [Oryza sativa Japonica Group] Length = 162 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 2/64 (3%) Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +N QY++F+A+R +G + ++ NPF WM E+I L+ + NFFE RV +YQ+ Sbjct: 83 MNGDLMSQYIEFVADRLLMALGCKKMYNVA-NPFDWM-ELISLQGKTNFFEKRVGDYQKA 140 Query: 120 AELK 123 + + Sbjct: 141 SVMS 144 >gi|61806369|ref|YP_214728.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM4] gi|61563913|gb|AAX46968.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM4] Length = 387 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVINQ-IKIENPHLWTKEFQQKS--RTMLHEATLLEIAYAHETMPKG-F 57 RDES HL ++ + ++P + ++KS + M E A+A +G Sbjct: 247 RDESQHLVITQQILKKWADGDDPEMQEIAKEEKSFVKDMFRNTVNEEKAWADYLFKEGSM 306 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFK--YTENPFPWMSEVIDLKKEKNF-FETRVT 114 +GLNA Y+++IANRR IGL+P++ NP PW ++ K ++N ET + Sbjct: 307 IGLNARLLNNYVEWIANRRMKAIGLDPIYDQPLRNNPLPWTEHWLNSKGQQNAPQETEIE 366 Query: 115 EYQQGA 120 Y G Sbjct: 367 SYVIGG 372 >gi|283832326|ref|ZP_06352067.1| ribonucleoside-diphosphate reductase, beta subunit [Citrobacter youngae ATCC 29220] gi|291071973|gb|EFE10082.1| ribonucleoside-diphosphate reductase, beta subunit [Citrobacter youngae ATCC 29220] Length = 376 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + +E +Q+ + +A L E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAALQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 >gi|88801048|ref|ZP_01116596.1| ribonucleotide-diphosphate reductase beta subunit [Reinekea sp. MED297] gi|88776187|gb|EAR07414.1| ribonucleotide-diphosphate reductase beta subunit [Reinekea sp. MED297] Length = 369 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 7/101 (6%) Query: 2 RDESLHLNFGIDVINQIKI---ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG 56 RDE+LHL+ G + I + + ++P + E Q R + +A E A+A+ G Sbjct: 230 RDEALHLS-GTEFILRQWLHGGDDPQMQIVADEEQATIRQIFEDAAEQEKAWANYLFNDG 288 Query: 57 -FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96 +GLNA QY++++ ++R + L P++ +NP PWM Sbjct: 289 SMIGLNAEILHQYIEYLTDQRLDALSLSPIYGRRDNPLPWM 329 >gi|308067265|ref|YP_003868870.1| ribonucleoside-diphosphate reductase beta subunit (ribonucleotide reductase small subunit) [Paenibacillus polymyxa E681] gi|305856544|gb|ADM68332.1| Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide reductase small subunit) [Paenibacillus polymyxa E681] Length = 343 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 5/119 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ H F +V Q+ + P L TKE M++ A LE +AH T+ K G++ Sbjct: 214 RDENQHCYFFAEVFKQLLSDFPELNTKENTDYVYRMINRAVELETNWAHYTL-KEVRGID 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LKKEK-NFFETRVTEY 116 Y++++AN R +G++ ++ + N PW+ D L K +FFE + Y Sbjct: 273 LNELSDYIKYMANMRLRLLGMDKAYEGVDVNCMPWIKPFSDEALNATKTDFFEAKSRNY 331 >gi|224539244|ref|ZP_03679783.1| hypothetical protein BACCELL_04146 [Bacteroides cellulosilyticus DSM 14838] gi|224519126|gb|EEF88231.1| hypothetical protein BACCELL_04146 [Bacteroides cellulosilyticus DSM 14838] Length = 349 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I ++K E P L+T + Q M+ E EI + + GLN Sbjct: 221 RDENTHLWLFRSIILELKKEEPELFTPDKVQIYENMMREGVKQEIEWGQYVIGDNIQGLN 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK----EKNFFETRVTEYQ 117 Y+ ++ N R +G PL+++ M V+ + +FFE + T Y Sbjct: 281 RQMIADYIHYLGNLRWSSLGNPPLYEHNRKEPESMHWVLQYSNANMVKTDFFEAKSTAYA 340 Query: 118 QGAELKWD 125 + L+ D Sbjct: 341 KSTALEDD 348 >gi|237732274|ref|ZP_04562755.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter sp. 30_2] gi|226907813|gb|EEH93731.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter sp. 30_2] Length = 376 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + +E +Q+ + +A L E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAALQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 >gi|302386033|ref|YP_003821855.1| ribonucleotide reductase [Clostridium saccharolyticum WM1] gi|302196661|gb|ADL04232.1| ribonucleotide reductase [Clostridium saccharolyticum WM1] Length = 368 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I +++ E P L+++E + RTM+ E EIA+ + GL Sbjct: 240 RDENTHLWLFRNIILELEKEEPKLFSRERIEVYRTMIKEGCEQEIAWGCYAIGDEVPGLT 299 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y+ ++ N RC +G +++ + + P W+++ + K +FFE + T Y Sbjct: 300 KEMITDYIMYLGNLRCASLGWGRIYEGHDKEPESMSWVNQFSNANLIKTDFFEAKSTAYA 359 Query: 118 QGAEL 122 + + L Sbjct: 360 KSSAL 364 >gi|288801822|ref|ZP_06407264.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella melaninogenica D18] gi|302344783|ref|YP_003813136.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella melaninogenica ATCC 25845] gi|288335864|gb|EFC74297.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella melaninogenica D18] gi|302149273|gb|ADK95535.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella melaninogenica ATCC 25845] Length = 348 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 8/127 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I ++K E P ++T E + M+ E EIA+ + GLN Sbjct: 220 RDENTHLWLFRSIILELKKEEPDMFTPEKIKVYEDMMREGVRQEIAWGQYVIGNDVQGLN 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENP-----FPWMSEVIDLKKEK-NFFETRVTE 115 A Y++++ N R +G F Y +N W+ + + K +FFE + T Sbjct: 280 AQMVSDYIRYLGNLRWSGLGFG--FLYDDNQKEPENMKWVGQYSNANMVKTDFFEAKSTA 337 Query: 116 YQQGAEL 122 Y + L Sbjct: 338 YAKSTAL 344 >gi|83592781|ref|YP_426533.1| ribonucleotide-diphosphate reductase subunit beta [Rhodospirillum rubrum ATCC 11170] gi|83575695|gb|ABC22246.1| Ribonucleoside-diphosphate reductase [Rhodospirillum rubrum ATCC 11170] Length = 358 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 32/147 (21%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58 +RDESLH GI I H W +E ++ + + +L++A + + FV Sbjct: 206 VRDESLHCQ-GI-------IRLFHEWNRETGALTKPVRDD--ILDVATTMVGLEEKFVDL 255 Query: 59 --------GLNAPSCEQYMQFIANRRCHQIGLEPL---FKYTE--------NPFPWMSEV 99 G+ A + Y++++A+ R Q+ L L F+ TE +P PW+ E+ Sbjct: 256 AFELGAIEGMRAEDIKSYVRYVADWRLTQLKLPILYGHFRETEAGYEQLRPHPLPWLVEI 315 Query: 100 IDLKKEKNFFETRVTEYQQGA-ELKWD 125 ++ + NFFE R TEY + A + WD Sbjct: 316 LNGVEHANFFEQRSTEYSKAATQGAWD 342 >gi|313900116|ref|ZP_07833616.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp. HGF2] gi|312955168|gb|EFR36836.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp. HGF2] Length = 347 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +++ E P L+T+E ++ + ML EI + + GL Sbjct: 219 RDENTHLWLFRSMILELQKEEPQLFTEELIEEYKDMLRHGVEEEIRWGEYVIGNHIEGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y+ ++ N R + +G L+ EN W+S + K +FFE R + Y Sbjct: 279 MEMVSDYIHYLGNLRSNSLGFGSLYDGFENEPKSMEWVSMYANANLIKTDFFEARSSAYA 338 Query: 118 QGAEL 122 + + L Sbjct: 339 KSSAL 343 >gi|330829606|ref|YP_004392558.1| ribonucleoside diphosphate reductase 1 subunit beta, ferritin-like protein [Aeromonas veronii B565] gi|328804742|gb|AEB49941.1| Ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like protein [Aeromonas veronii B565] Length = 393 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E +Q + EA + E +A G Sbjct: 253 RDEALHLTGTQHMLNLMRTGQDDPEMAEIAAECEQACFEIFKEAAIQEKEWAEYLFQDGS 312 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMS 97 +GLN QY+++I N R +GL+P F T +NP PW++ Sbjct: 313 MIGLNKDILCQYVEYITNLRMSAVGLQPAFAGTKQNPIPWIN 354 >gi|303389600|ref|XP_003073032.1| ribonucleoside-diphosphate reductase small subunit [Encephalitozoon intestinalis ATCC 50506] gi|303302176|gb|ADM11672.1| ribonucleoside-diphosphate reductase small subunit [Encephalitozoon intestinalis ATCC 50506] Length = 326 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 62/118 (52%), Gaps = 10/118 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH F + + + K+ ++ + ++ +A +E + E++P +G+N Sbjct: 202 RDEGLHCEFACLLHRR--------YLKQKCKRVKEVVMDAVEVEKRFLSESLPVDLIGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +Y++F+A+ + E ++ +T NPF +M E I L + NFF+ R ++YQ+ Sbjct: 254 CQLMCKYIEFVADTLLENLEEEKIY-HTPNPFDFM-ENISLVGKTNFFDKRESQYQKA 309 >gi|488081|gb|AAA56996.1| ribonucleoside-diphosphate reductase small subunit [Drosophila melanogaster] Length = 214 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 55/101 (54%), Gaps = 9/101 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +++ ++ +A +E + + +P +G+N Sbjct: 120 RDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMN 172 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL 102 QY++F+A+R ++G+ ++ T+NPF +M E+I L Sbjct: 173 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISL 211 >gi|297582631|ref|YP_003698411.1| ribonucleoside-diphosphate reductase [Bacillus selenitireducens MLS10] gi|297141088|gb|ADH97845.1| Ribonucleoside-diphosphate reductase [Bacillus selenitireducens MLS10] Length = 347 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 4/118 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F + + ++P L T+E Q + A LE +A + G++ Sbjct: 219 RDEMQHAYFMSQFVRILLTDHPELNTRENVQYVYDAMASAAGLEQEWA-AVILADIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM---SEVIDLKKEKNFFETRVTEY 116 Y++++ N+R Q+GL LF +NP PW+ S+ + + + +FFE + Y Sbjct: 278 LGEFNGYVEYLVNKRLRQLGLSNLFPERDNPMPWIHVFSDTMMNQTKSDFFEQKSRSY 335 >gi|332993182|gb|AEF03237.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas sp. SN2] Length = 376 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 5/105 (4%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL+ ++N ++P + ++ ++++R + A E +A G Sbjct: 237 RDENLHLSSTQHILNLWARSKDDPEMAQIAQDCKEEARAIFMNAVEQEKEWADYLFKTGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101 +GLN Y+++IAN+R IGL+ F+ + NP PWM+ ++ Sbjct: 297 MIGLNKEILCSYVEYIANQRMTAIGLDAPFEISSNPLPWMNNYLN 341 >gi|90407600|ref|ZP_01215781.1| ribonucleoside-diphosphate reductase beta chain [Psychromonas sp. CNPT3] gi|90311303|gb|EAS39407.1| ribonucleoside-diphosphate reductase beta chain [Psychromonas sp. CNPT3] Length = 424 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 24/134 (17%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTML-----HEATLLEIAYAH---ETM 53 ++E LH NFGID+I IK ENP + +E+QQ RT+ E+ +++ YA + + Sbjct: 293 KEEQLHGNFGIDLIQIIKQENPSWFNEEYQQSVRTLCLQAFKSESKIIDWIYAEGELDFI 352 Query: 54 PKGFVGLNAPSCEQYMQFIANR---RCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKN 107 PK Q +FI NR I +E +F+ E W + I K + Sbjct: 353 PKA----------QVKEFIKNRFNQSLQSIDIEKVFEIDEKLLEKTEWFDDEIIGTKHGD 402 Query: 108 FFETRVTEYQQGAE 121 FF R Y + ++ Sbjct: 403 FFVKRSINYNKRSK 416 >gi|257373022|ref|YP_003175796.1| ribonucleotide reductase [Halomicrobium mukohataei DSM 12286] gi|257167746|gb|ACV49438.1| ribonucleotide reductase [Halomicrobium mukohataei DSM 12286] Length = 336 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/124 (24%), Positives = 64/124 (51%), Gaps = 4/124 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60 ++E +H FG++++ I+ ENP L+ ++F+++ + +A E+ +G + L Sbjct: 205 KEEQIHGLFGVELVETIREENPDLFDEDFEEEVQAACQQAFEAEMKILDWIFGEGELEFL 264 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117 + +++ N+ +G+EP+F+ E+ W E I + K+ +FF R T Y Sbjct: 265 PRAHVDAFLRDRFNQSLENVGVEPIFEPDEDLLEETRWFDEDIMMTKDNDFFSKRSTTYN 324 Query: 118 QGAE 121 + A+ Sbjct: 325 KHAQ 328 >gi|13358428|ref|NP_078636.1| Ribonucleotide reductase small subunit [Lymphocystis disease virus 1] Length = 378 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 9/123 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE-----IAYAHETMPK 55 +RDE++H+ + E + T+EF R + E LE + + + T K Sbjct: 251 IRDENIHVEGLCKLFKTFISEYSFILTEEFFSAVRKIQAEVLQLETDFIILLFTNITEIK 310 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGL-EPLFKYTENPFPWMSEVIDLKKEKNFFETRVT 114 G L + Y+++I RR Q+GL E NP W+S +I + NFFE RVT Sbjct: 311 GLTKLCMIN---YVKYILQRRTEQLGLLESTEVLLTNPIDWISWLIAGRNITNFFENRVT 367 Query: 115 EYQ 117 EY Sbjct: 368 EYD 370 >gi|89092731|ref|ZP_01165684.1| ribonucleotide-diphosphate reductase beta subunit [Oceanospirillum sp. MED92] gi|89083243|gb|EAR62462.1| ribonucleotide-diphosphate reductase beta subunit [Oceanospirillum sp. MED92] Length = 376 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P KE +Q + EA E +A +G Sbjct: 237 RDEALHLTGTQHMLNIMASGADDPDYKDIAKECEQDVYNIFKEAAQQEKDWAQYLFREGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLNA Y+++I N R + LE +F +NP PWM+ Sbjct: 297 MIGLNAQILSDYVEYITNVRMKALNLEEIFPARQNPLPWMN 337 >gi|259907948|ref|YP_002648304.1| ribonucleotide-diphosphate reductase subunit beta [Erwinia pyrifoliae Ep1/96] gi|224963570|emb|CAX55060.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia pyrifoliae Ep1/96] gi|283477829|emb|CAY73745.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia pyrifoliae DSM 12163] gi|310768143|gb|ADP13093.1| ribonucleotide-diphosphate reductase subunit beta [Erwinia sp. Ejp617] Length = 376 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + KE +Q+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAKECRQECYDLFVLAAEQEKEWAEYLFSGGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R + +GL+ FK NP PW++ Sbjct: 297 MIGLNKDILCQYIEYITNIRMNAVGLDLPFKTRSNPIPWIN 337 >gi|145298925|ref|YP_001141766.1| ribonucleotide-diphosphate reductase subunit beta [Aeromonas salmonicida subsp. salmonicida A449] gi|142851697|gb|ABO90018.1| ribonucleoside-diphosphate reductase, beta subunit [Aeromonas salmonicida subsp. salmonicida A449] Length = 377 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + + E +Q + EA + E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRTGQDDPEMAEISAECEQACFEIFKEAAIQEKEWAEYLFQDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMS 97 +GLN QY+++I N R + +GL+P F +NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNLRMNAVGLQPAFAGAKQNPIPWIN 338 >gi|188533366|ref|YP_001907163.1| ribonucleotide-diphosphate reductase subunit beta [Erwinia tasmaniensis Et1/99] gi|188028408|emb|CAO96269.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia tasmaniensis Et1/99] Length = 376 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + KE +Q+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAKECRQECYDLFVLAAEQEKEWAEYLFSGGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R + +GL+ FK NP PW++ Sbjct: 297 MIGLNKDILCQYIEYITNIRMNAVGLDLPFKTRSNPIPWIN 337 >gi|292488819|ref|YP_003531706.1| ribonucleoside-diphosphate reductase 1 subunit beta [Erwinia amylovora CFBP1430] gi|292899970|ref|YP_003539339.1| ribonucleoside-diphosphate reductase 1 subunit beta [Erwinia amylovora ATCC 49946] gi|291199818|emb|CBJ46941.1| ribonucleoside-diphosphate reductase 1 beta subunit [Erwinia amylovora ATCC 49946] gi|291554253|emb|CBA21550.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia amylovora CFBP1430] gi|312172977|emb|CBX81232.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia amylovora ATCC BAA-2158] Length = 376 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + KE +Q+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAKECRQECYDLFVLAAEQEKEWAEYLFSGGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R + +GL+ FK NP PW++ Sbjct: 297 MIGLNKDILWQYIEYITNIRMNAVGLDLPFKTRSNPIPWIN 337 >gi|45686047|ref|YP_003810.1| unknown [Ambystoma tigrinum virus] gi|37722471|gb|AAP33216.1| unknown [Ambystoma tigrinum stebbensi virus] Length = 387 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 10/127 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEF-----QQKSRTMLHEATLLEIAYAHETMPK 55 +RDE++H+ + + E P + T++ + R E +++A+ E P Sbjct: 252 VRDENIHVEGVSKLFETLNSEYPWVVTEDLIELFKEDAERVAELEEAFVDLAF-QECGP- 309 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDLKKEKNFFETRV 113 GL + Y+ ++ N R +GL L + P PW+ +ID NFFE V Sbjct: 310 -VCGLEPKQVKDYVLYVINLRASNMGLPRLIERAPEACPIPWVKWLIDGADLTNFFENHV 368 Query: 114 TEYQQGA 120 TEY+ G Sbjct: 369 TEYETGG 375 >gi|58532963|ref|YP_195186.1| ribonucleotide reductase A subunit [Synechococcus phage S-PM2] gi|58331430|emb|CAF34216.1| ribonucleotide reductase A subunit [Synechococcus phage S-PM2] Length = 394 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 6/100 (6%) Query: 2 RDESLHLNFGIDVINQIKI-ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 RDES H+ ++IN+ K ++P + K+ + M + EI +A G Sbjct: 254 RDESQHMTITQNIINKWKAGDDPDMVEIAKQEENNVYDMFKKCVEEEIIWADYLFRDGSM 313 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPW 95 +GLNA ++Y+++ ANRR IG++ +F + NP PW Sbjct: 314 IGLNAKLLQKYVEWTANRRMKAIGMKQIFDVPLSNNPLPW 353 >gi|282860353|ref|ZP_06269421.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella bivia JCVIHMP010] gi|282586851|gb|EFB92088.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella bivia JCVIHMP010] Length = 347 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L+T E M+ E EIA+ + GL Sbjct: 219 RDENTHLWLFRNMIIELKQEEPELFTPEKVAIYEAMMREGVAQEIAWGQYVIGNEVQGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y++++ N R +G + LF+ + W+++ + K +FFE + T Y Sbjct: 279 QQMVSDYIRYLGNLRWKSLGFDYLFEDNQTEPTDMEWVAQYSNANMVKTDFFEAKSTAYA 338 Query: 118 QGAEL 122 + L Sbjct: 339 KSTAL 343 >gi|254361270|ref|ZP_04977413.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica PHL213] gi|153092766|gb|EDN73809.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica PHL213] Length = 376 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKIEN--PHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + N P + +E +Q++ + A E A+A G Sbjct: 237 RDEALHLTGTQHILNIMAYGNDDPEMAEIARECRQEAYELFLSAAEQEKAWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL FK NP PW++ Sbjct: 297 MIGLNRDILVQYIEYITNIRMQAVGLPLPFKARSNPIPWIN 337 >gi|23100542|ref|NP_694009.1| ribonucleotide-diphosphate reductase subunit beta [Oceanobacillus iheyensis HTE831] gi|22778775|dbj|BAC15043.1| ribonucleoside-diphosphate reductase beta subunit [Oceanobacillus iheyensis HTE831] Length = 347 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 4/124 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++ ENP EF ++ LEI ++H + K G++ Sbjct: 219 RDELEHGRFITELFRATLEENPSHNNAEFIDWIYDRFQQSVELEIEWSHYVLNK-LEGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 + Y+++ AN+ +GLE L+ ++ ENP W+ +D + +FFE + +Y + Sbjct: 278 MDDMDGYIKYRANKMLRMMGLEELYPQHVENPMKWVRAYVDNFDGTKTDFFEQKSRQYTK 337 Query: 119 GAEL 122 ++L Sbjct: 338 TSDL 341 >gi|326782198|ref|YP_004322599.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM1] gi|310004405|gb|ADO98798.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM1] Length = 395 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTK---EFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 RDES HL +I + + + + E + M A E A+A G Sbjct: 255 RDESQHLVLTQQIIKKWQDGDDEEMVRIAEEEKSNVLKMFKNAVEEEKAWASYLFKNGSM 314 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEKNF-FETRVT 114 +GLN QY++F ANRR IGL+P++ + NP PW ++ K ++N ET + Sbjct: 315 IGLNEKLLGQYVEFTANRRMKAIGLDPIYDISPRNNPLPWTQYWLNSKGQQNAPQETEIE 374 Query: 115 EYQQGA 120 Y G Sbjct: 375 SYVIGG 380 >gi|300717619|ref|YP_003742422.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia billingiae Eb661] gi|299063455|emb|CAX60575.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia billingiae Eb661] Length = 376 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLL----EIAYAHETMPKG- 56 RDE+LHL ++N ++ E ++SR ++ +L E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGEDDPEMAEIARESRQECYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R H +GL+ FK NP PW++ Sbjct: 297 MIGLNKDILCQYIEYITNIRMHAVGLDLPFKTRSNPIPWIN 337 >gi|261493906|ref|ZP_05990416.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495801|ref|ZP_05992236.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308535|gb|EEY09803.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310439|gb|EEY11632.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 376 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKIEN--PHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + N P + +E +Q++ + A E A+A G Sbjct: 237 RDEALHLTGTQHILNIMTYGNDDPEMAEIARECRQEAYELFLSAAEQEKAWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL FK NP PW++ Sbjct: 297 MIGLNRDILVQYIEYITNIRMQAVGLPLPFKARSNPIPWIN 337 >gi|207108882|ref|ZP_03243044.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori HPKX_438_CA4C1] Length = 79 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 39/64 (60%), Gaps = 2/64 (3%) Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEY 116 +GL + EQY+QF+A+ R ++G+ ++ ++P W+ +++ NFFE RV+ Y Sbjct: 11 LGLTSSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNY 69 Query: 117 QQGA 120 +G+ Sbjct: 70 AKGS 73 >gi|326783148|ref|YP_004323545.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM2] gi|310005566|gb|ADO99954.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM2] Length = 394 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTK---EFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 RDES HL +I + + + + E + M A E A+A G Sbjct: 254 RDESQHLVLTQQIIKKWQDGDDEEMVRIAEEEKPNVLKMFQNAVEEEKAWAQYLFKNGSM 313 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEKNF-FETRVT 114 +GLN QY++F ANRR IGL+P++ + NP PW ++ K ++N ET + Sbjct: 314 IGLNEKLLGQYVEFTANRRMKAIGLDPIYDISPRNNPLPWTQYWLNSKGQQNAPQETEIE 373 Query: 115 EYQQGA 120 Y G Sbjct: 374 SYVIGG 379 >gi|307565004|ref|ZP_07627521.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella amnii CRIS 21A-A] gi|307346317|gb|EFN91637.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella amnii CRIS 21A-A] Length = 347 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L+T E M+ E EIA+ + GL Sbjct: 219 RDENTHLWLFRNIIVELKQEEPDLFTPEKVAVYEEMMREGVRQEIAWGQYVIGNDVQGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y++++ N R +G + LF+ + W+++ + K +FFE + T Y Sbjct: 279 QQMVYDYIRYLGNLRWKSLGFDYLFEDNQAEPADMQWVAQYSNANMVKTDFFEAKSTAYA 338 Query: 118 QGAEL 122 + L Sbjct: 339 KSTAL 343 >gi|157144813|ref|YP_001452132.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter koseri ATCC BAA-895] gi|157082018|gb|ABV11696.1| hypothetical protein CKO_00540 [Citrobacter koseri ATCC BAA-895] Length = 376 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ I++P + +E +Q + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGIDDPEMAEIAEESKQACYDLFVQAAQQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GLE F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLELPFQTRSNPIPWIN 337 >gi|119944866|ref|YP_942546.1| ribonucleotide-diphosphate reductase subunit beta [Psychromonas ingrahamii 37] gi|119863470|gb|ABM02947.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Psychromonas ingrahamii 37] Length = 381 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHLWTKEFQ--QKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN ++N ++P + + + R + +A E +A G Sbjct: 242 RDEALHLNSTQQILNLWADGKDDPEMAEIAIECFAEGREIFLQAAQQEKDWAKYLFKDGS 301 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++IAN R IG P F+ NP PW++ Sbjct: 302 MIGLNEQILSQYVEYIANLRMQAIGYAPEFEVKSNPIPWIN 342 >gi|283786035|ref|YP_003365900.1| ribonucleoside-diphosphate reductase 1 beta chain [Citrobacter rodentium ICC168] gi|282949489|emb|CBG89102.1| ribonucleoside-diphosphate reductase 1 beta chain [Citrobacter rodentium ICC168] Length = 376 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A L E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAALQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 >gi|326783253|ref|YP_004323801.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn33] gi|310005200|gb|ADO99589.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn33] Length = 296 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVINQIKI-ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 RDES HL +++N+ + ++P + KE Q +M A E +A G Sbjct: 156 RDESQHLVLTQNILNKWRDGDDPEMDIIAKEEQSWVMSMFQRAVDEEKMWAEYLFKNGSM 215 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114 +GLN Y+++IANRR I ++P+F NP PW ++ K ++N ET + Sbjct: 216 IGLNERLLHNYVEWIANRRMKAICIKPMFDIPAKNNPLPWTEHWLNSKGQQNAPQETEIE 275 Query: 115 EYQQGA 120 Y G Sbjct: 276 SYVIGG 281 >gi|229916488|ref|YP_002885134.1| ribonucleotide-diphosphate reductase subunit beta [Exiguobacterium sp. AT1b] gi|229467917|gb|ACQ69689.1| Ribonucleoside-diphosphate reductase [Exiguobacterium sp. AT1b] Length = 346 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 6/122 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHL-WTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 RDE H F ++ + ENP + +F Q + EA LEI + E + + GL Sbjct: 216 RDEMQHSYFISQLLRAVLTENPKIDENGQFSQFVYDTMAEAVDLEIEWC-EYVLRDLDGL 274 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLK---KEKNFFETRVTEY 116 + Y++++AN+R IGL L++ + E+ PW+ D + +FFE + Y Sbjct: 275 DVSEMRDYVKYLANKRLRVIGLNDLYEGFDEDVMPWIRAYSDDSLNATKSDFFEQKSRSY 334 Query: 117 QQ 118 + Sbjct: 335 AK 336 >gi|33519930|ref|NP_878762.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Blochmannia floridanus] gi|33504276|emb|CAD83168.1| ribonucleoside-diphosphate reductase 1 beta chain [Candidatus Blochmannia floridanus] Length = 376 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLWTKEF--QQKSRTMLHEATLLEIAYAHETMPKG- 56 RDESLHLN ++N ++ ++P + Q++S + A E +AH G Sbjct: 237 RDESLHLNATQHILNLMRSGSDDPEMVDISLICQEESYNLFLMAAEQEKTWAHYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R IGL+ F N PW++ Sbjct: 297 MIGLNKEILCQYIEYITNIRMQAIGLKTPFNTKTNSIPWIN 337 >gi|117619492|ref|YP_856857.1| ribonucleotide-diphosphate reductase subunit beta [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560899|gb|ABK37847.1| ribonucleoside-diphosphate reductase, beta subunit [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 377 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E +Q + EA + E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGQDDPEMAEIAAECEQACFELFKEAAIQEKEWAEYLFQDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMS 97 +GLN QY+++I N R + +GL+P F +NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNLRMNAVGLQPAFAGAKQNPIPWIN 338 >gi|307107666|gb|EFN55908.1| hypothetical protein CHLNCDRAFT_57791 [Chlorella variabilis] Length = 849 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 7/98 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H + + L +K +++ ++ EA E A+ +P GL Sbjct: 756 RDEGVH-------VESAGVMYSLLRSKLTDSQAQGIVGEAVEAERAFVCGQLPLEATGLE 808 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEV 99 A + E+Y+Q++ +R +G PL++ NP PW+ + Sbjct: 809 AGAMEEYLQYVGDRLLGALGHAPLYRVAANPLPWLEGI 846 >gi|326782458|ref|YP_004322858.1| ribonucleotide reductase A subunit [Synechococcus phage S-ShM2] gi|310003406|gb|ADO97803.1| ribonucleotide reductase A subunit [Synechococcus phage S-ShM2] Length = 386 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVI-NQIKIENPHLWTKEFQQKSRT--MLHEATLLEIAYAHETMPKG-F 57 RDES HL +++ N ++P + +++ M + E A+A G Sbjct: 246 RDESQHLVITQNILKNWRDGDDPEMQQIALEEEENVIKMFAKTVDEEKAWAEYLFKDGSM 305 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114 +GLN QY+++IANRR IGL+P++ NP PW ++ K ++N ET + Sbjct: 306 IGLNDRLLSQYVEWIANRRMKAIGLKPMYNVPAKSNPLPWTEHWLNSKGQQNAPQETEIE 365 Query: 115 EYQQGA 120 Y G Sbjct: 366 SYVIGG 371 >gi|300723737|ref|YP_003713044.1| ribonucleoside-diphosphate reductase 1 subunit beta [Xenorhabdus nematophila ATCC 19061] gi|297630261|emb|CBJ90912.1| ribonucleoside-diphosphate reductase 1, beta subunit [Xenorhabdus nematophila ATCC 19061] Length = 376 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + KE +QK + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAKECEQKCYDLFVDAAEQEKEWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLKLPFETRSNPIPWIN 337 >gi|71280050|ref|YP_269047.1| ribonucleotide-diphosphate reductase subunit beta [Colwellia psychrerythraea 34H] gi|71145790|gb|AAZ26263.1| ribonucleotide reductase, beta subunit [Colwellia psychrerythraea 34H] Length = 376 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + ++E + + + + E +A G Sbjct: 237 RDEALHLTGTQHILNNWRSGKDDPEMKIISEELRDEGLQIFLDVVEQEKEWAQYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLNA QY+++I+N+R IG F NP PWM+ Sbjct: 297 MIGLNADILNQYIEYISNQRLTAIGFGAPFDIKSNPLPWMN 337 >gi|304414248|ref|ZP_07395616.1| ribonucleotide reductase beta subunit [Candidatus Regiella insecticola LSR1] gi|304283462|gb|EFL91858.1| ribonucleotide reductase beta subunit [Candidatus Regiella insecticola LSR1] Length = 381 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ ++P + KE Q + +A E +A G Sbjct: 242 RDEALHLTGTQHIINLMREGTDDPEMAEIAKECQNNCFELFKKAAEQEKEWATYLFRDGS 301 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL FK NP PW++ Sbjct: 302 MIGLNKDILCQYIEYITNIRMQAVGLALPFKIRSNPIPWIN 342 >gi|332297025|ref|YP_004438947.1| ribonucleotide reductase [Treponema brennaborense DSM 12168] gi|332180128|gb|AEE15816.1| ribonucleotide reductase [Treponema brennaborense DSM 12168] Length = 346 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 52/125 (41%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P ++T+E ML E EI + + GL Sbjct: 218 RDENTHLWLFKNIILELKKERPDMFTEEKVASYAEMLKEGVRQEIEWGEYVIGDDIPGLT 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPL---FKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y+ ++ N R + PL F W+S + K +FFE R T Y Sbjct: 278 RKMVRDYITYLGNLRWTNLDFPPLYPGFDTEPEDMAWVSAYSNANMVKTDFFEARSTAYA 337 Query: 118 QGAEL 122 + L Sbjct: 338 KSTAL 342 >gi|226327851|ref|ZP_03803369.1| hypothetical protein PROPEN_01732 [Proteus penneri ATCC 35198] gi|225203555|gb|EEG85909.1| hypothetical protein PROPEN_01732 [Proteus penneri ATCC 35198] Length = 376 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + EA E +A +G Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAEECEQECYDLFVEAAEQEKEWAEYLFSEGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ FK NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLKLPFKARSNPIPWIN 337 >gi|115691069|ref|XP_001203692.1| PREDICTED: similar to ribonuleotide reductase small subunit, partial [Strongylocentrotus purpuratus] gi|115735426|ref|XP_798682.2| PREDICTED: similar to ribonuleotide reductase small subunit, partial [Strongylocentrotus purpuratus] Length = 258 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 31/117 (26%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + + P + + ++ +A LE Y E +P +G+N Sbjct: 165 RDEGLHCDFACLLFSHLNHPTP-------VSRIQEIIRDAVRLEEEYLSEALPVALIGMN 217 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 A QY+QF+A+R ++ + NFFE RV EYQ+ Sbjct: 218 ARLMCQYIQFVADRLLMEL------------------------KSNFFEKRVGEYQK 250 >gi|213609160|ref|ZP_03368986.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 144 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + +E +Q+ + +A E +A G Sbjct: 5 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 64 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 65 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 105 >gi|260772919|ref|ZP_05881835.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio metschnikovii CIP 69.14] gi|260612058|gb|EEX37261.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio metschnikovii CIP 69.14] Length = 377 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ +++ +E +Q+ + EA E +A G Sbjct: 237 RDEALHLTGTQHMINLLRNGLDDFTFLQIAEECKQQCFDLFKEAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GLEP + K T NP PW++ Sbjct: 297 MIGLNRDILCQYVEYITNIRMQAVGLEPAYPKATSNPIPWIN 338 >gi|326782536|ref|YP_004323092.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM1] gi|310002750|gb|ADO97149.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM1] Length = 386 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVINQIK-IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 RDES HL +++ + K ++P + KE Q M E +A +G Sbjct: 246 RDESQHLVITQNILRKWKEGDDPEMAVIAKEEQPFVAEMFKRTVNEEKMWADYLFKQGSM 305 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114 +GLN Y+++IANRR IGL+P+F NP PW ++ K ++N ET + Sbjct: 306 IGLNDRLLHNYVEWIANRRMKAIGLDPIFDVPAKNNPLPWTEHWLNSKGQQNAPQETEIE 365 Query: 115 EYQQGA 120 Y G Sbjct: 366 SYVVGG 371 >gi|61806080|ref|YP_214440.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM2] gi|61374589|gb|AAX44586.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM2] gi|265525292|gb|ACY76089.1| NrdB [Prochlorococcus phage P-SSM2] Length = 384 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 6/108 (5%) Query: 2 RDESLHLNFGIDVINQI-KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 RDE+ HL +++N K ++P + KE +Q + M + E +A G Sbjct: 244 RDENQHLAITQNILNNWRKGDDPEMVEIMKEEEQWTYQMFEKCVNEEKMWAEYLFKDGSM 303 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLK 103 +GLN QY++++ANRR IG++P++ NP PW I K Sbjct: 304 IGLNDKLLHQYVEWVANRRMRSIGMKPVYDIAAKNNPLPWTEHWISSK 351 >gi|163748931|ref|ZP_02156182.1| ribonucleotide-diphosphate reductase beta subunit [Shewanella benthica KT99] gi|161331307|gb|EDQ02195.1| ribonucleotide-diphosphate reductase beta subunit [Shewanella benthica KT99] Length = 376 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 5/100 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN ++ ++ +++P + +E +Q + + +A E +A G Sbjct: 237 RDEALHLNSTQHILKIMRAGVDDPEMGEIAEECEQLAYDIFVKAAEQEKEWAQYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96 +GLN QY+++I N R + L P + NP PWM Sbjct: 297 MIGLNEAILCQYVEYITNERMKSVNLTPHYDEITNPLPWM 336 >gi|213646443|ref|ZP_03376496.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289824706|ref|ZP_06544205.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 240 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + +E +Q+ + +A E +A G Sbjct: 101 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 160 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 161 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 201 >gi|326784253|ref|YP_004324793.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM5] gi|310003484|gb|ADO97880.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM5] Length = 388 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVINQIK-IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 RDES HL +++ + K ++P + KE + + M E +A +G Sbjct: 248 RDESQHLVITQNILRKWKEGDDPEMKEIAKEEKGWVQHMFERTVNEEKVWADYLFKQGSM 307 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114 +GLN Y+++IANRR IGL+P+F NP PW ++ K ++N ET + Sbjct: 308 IGLNDRLLHNYVEWIANRRMKSIGLDPMFDIPAKNNPLPWTEHWLNSKGQQNAPQETEIE 367 Query: 115 EYQQGA 120 Y G Sbjct: 368 SYVVGG 373 >gi|71892252|ref|YP_277986.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796358|gb|AAZ41109.1| ribonucleoside-diphosphate reductase 1, beta subunit [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 376 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN ++N ++ ++P + + E QQ+S + A E +A+ G Sbjct: 237 RDEALHLNATQHILNLMRSGSDDPEMADISTECQQESYALFLMAAEQEKNWANYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R IGL F N PW++ Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAIGLRTPFNIKSNVIPWIN 337 >gi|255026984|ref|ZP_05298970.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes FSL J2-003] Length = 336 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 7/113 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T+E + + A LE ++ E + +G G++ Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWSEEVL-QGIEGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKNFFETRV 113 Y+++ AN+ +G+ L+ +++N W+ D NF ET+ Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYAD-----NFTETKT 327 >gi|227356095|ref|ZP_03840485.1| ribonucleoside-diphosphate reductase 1, beta subunit [Proteus mirabilis ATCC 29906] gi|227163740|gb|EEI48652.1| ribonucleoside-diphosphate reductase 1, beta subunit [Proteus mirabilis ATCC 29906] Length = 376 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E +Q+ + EA E +A +G Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEQECYDLFVEAAEQEKEWAEYLFSEGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ FK NP PW++ Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLKLPFKARSNPIPWIN 337 >gi|197285594|ref|YP_002151466.1| ribonucleotide-diphosphate reductase subunit beta [Proteus mirabilis HI4320] gi|194683081|emb|CAR43612.1| ribonucleoside-diphosphate reductase 1, beta subunit [Proteus mirabilis HI4320] Length = 376 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E +Q+ + EA E +A +G Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEQECYDLFVEAAEQEKEWAEYLFSEGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ FK NP PW++ Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLKLPFKARSNPIPWIN 337 >gi|320538993|ref|ZP_08038668.1| putative ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like protein [Serratia symbiotica str. Tucson] gi|320030926|gb|EFW12930.1| putative ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like protein [Serratia symbiotica str. Tucson] Length = 376 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGADDPEMAEIAVECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I+N R +GLE FK NP PW++ Sbjct: 297 MIGLNKDILCQYVEYISNIRMQAVGLELPFKTRSNPIPWIN 337 >gi|88859281|ref|ZP_01133921.1| ribonucleotide-diphosphate reductase beta subunit [Pseudoalteromonas tunicata D2] gi|88818298|gb|EAR28113.1| ribonucleotide-diphosphate reductase beta subunit [Pseudoalteromonas tunicata D2] Length = 376 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL+ ++N Q ++P + + +++S M A E +A G Sbjct: 237 RDEALHLSGTQHMLNIMQDGQDDPEMAIVAAQLREESIEMFRTAAQQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F T NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNVRMSAVGLPQQFSITSNPIPWIN 337 >gi|15079087|ref|NP_149839.1| 376L [Invertebrate iridescent virus 6] gi|82012049|sp|Q91FE8|RIR2_IIV6 RecName: Full=Probable ribonucleoside-diphosphate reductase small subunit 376L; AltName: Full=Ribonucleotide reductase small subunit gi|15042456|gb|AAK82236.1|AF303741_377 376L [Invertebrate iridescent virus 6] Length = 360 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 3/65 (4%) Query: 55 KGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFET 111 K F GL + Y+++IA+RR + +G + +F Y NP P + +I+ NFFE Sbjct: 279 KDFFGLTPQRLKAYIKYIADRRLNLMGYKSIFNLEPYPTNPLPELEIMINAPTHTNFFEN 338 Query: 112 RVTEY 116 R T+Y Sbjct: 339 RSTDY 343 >gi|126658748|ref|ZP_01729893.1| hypothetical protein CY0110_32340 [Cyanothece sp. CCY0110] gi|126620010|gb|EAZ90734.1| hypothetical protein CY0110_32340 [Cyanothece sp. CCY0110] Length = 347 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 4/93 (4%) Query: 37 MLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP-- 94 + H EI + + +G++ S E Y +++AN R IG+ ++ ENP+ Sbjct: 251 LFHTTVEREIEWTNHIFDGQILGVSKASTEAYTKYLANLRLKAIGIPAIYPKIENPYAHL 310 Query: 95 -WMSEVIDLKKEKNFFETRVTEYQQGAELK-WD 125 W K + FFET VT Y Q +K WD Sbjct: 311 DWADFKGIGKSKAAFFETEVTGYAQPTAVKGWD 343 >gi|213021870|ref|ZP_03336317.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 277 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + +E +Q+ + +A E +A G Sbjct: 138 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 197 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 198 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 238 >gi|160947324|ref|ZP_02094491.1| hypothetical protein PEPMIC_01258 [Parvimonas micra ATCC 33270] gi|158446458|gb|EDP23453.1| hypothetical protein PEPMIC_01258 [Parvimonas micra ATCC 33270] Length = 349 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++ +++ E P L+T+E + M+ EIA+ + + GL Sbjct: 218 RDENTHLWLFKKMLLELQNEEPELFTEEKVAVYKDMIKTGVEQEIAWGKYVLGENIPGLT 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 E Y++++ N R + L+ Y E P W+SE D K +FFE + + Y Sbjct: 278 IQMVEDYIKYLGNLRSTALNFGKLYDGYDEEPESMKWVSEYSDPNAIKTDFFEAKPSAYS 337 Query: 118 QGAELKWD 125 + + + D Sbjct: 338 KSSVIDDD 345 >gi|315644971|ref|ZP_07898099.1| Ribonucleoside-diphosphate reductase [Paenibacillus vortex V453] gi|315279682|gb|EFU42984.1| Ribonucleoside-diphosphate reductase [Paenibacillus vortex V453] Length = 343 Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 5/119 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ H F +V Q+ + P L ++E + A LE +AH T+ G++ Sbjct: 214 RDENQHCYFFAEVFKQLLKDFPELNSQENIDYLYRTIDRAVELETNWAHYTL-SNVRGID 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LKKEK-NFFETRVTEY 116 Y+++IANRR +GLE ++ + N PW+ D L K +FFE + Y Sbjct: 273 LNELGDYIKYIANRRITMMGLEKAYQGVDVNCMPWIKPFSDEALNATKTDFFEAKSRNY 331 >gi|205353394|ref|YP_002227195.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205273175|emb|CAR38137.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628485|gb|EGE34828.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 376 Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 >gi|56412825|ref|YP_149900.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197361758|ref|YP_002141394.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127082|gb|AAV76588.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093234|emb|CAR58679.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 376 Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 >gi|85059563|ref|YP_455265.1| ribonucleotide-diphosphate reductase subunit beta [Sodalis glossinidius str. 'morsitans'] gi|84780083|dbj|BAE74860.1| ribonucleoside-diphosphate reductase 1 beta subunit [Sodalis glossinidius str. 'morsitans'] Length = 376 Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+S + A E +A G Sbjct: 237 RDEALHLTSTQHMLNLMRSGEDDPEMAEIARECQQESYDLFLLAAQQEKEWASYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQSVGLDLPFATRSNPIPWIN 337 >gi|168229641|ref|ZP_02654699.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194471700|ref|ZP_03077684.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|238913487|ref|ZP_04657324.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|194458064|gb|EDX46903.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205335835|gb|EDZ22599.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 376 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 >gi|161502570|ref|YP_001569682.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863917|gb|ABX20540.1| hypothetical protein SARI_00614 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 376 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMADIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 >gi|16761204|ref|NP_456821.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141101|ref|NP_804443.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|25285831|pir||AD0791 ribonucleoside-diphosphate reductase (EC 1.17.4.1) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503503|emb|CAD07510.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella enterica subsp. enterica serovar Typhi] gi|29136727|gb|AAO68292.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 376 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 >gi|16765605|ref|NP_461220.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62180851|ref|YP_217268.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161613001|ref|YP_001586966.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167549728|ref|ZP_02343487.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167992612|ref|ZP_02573709.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168237293|ref|ZP_02662351.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168242393|ref|ZP_02667325.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168261709|ref|ZP_02683682.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168466025|ref|ZP_02699895.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168817991|ref|ZP_02829991.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194442577|ref|YP_002041539.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449379|ref|YP_002046332.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194735273|ref|YP_002115349.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197247637|ref|YP_002147234.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262505|ref|ZP_03162579.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198242288|ref|YP_002216347.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200387602|ref|ZP_03214214.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204929071|ref|ZP_03220214.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|207857697|ref|YP_002244348.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213161593|ref|ZP_03347303.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|224583238|ref|YP_002637036.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|1172945|sp|P37427|RIR2_SALTY RecName: Full=Ribonucleoside-diphosphate reductase 1 subunit beta; AltName: Full=Protein B2; AltName: Full=Protein R2; AltName: Full=Ribonucleotide reductase 1 gi|510349|emb|CAA51453.1| nrdB [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16420817|gb|AAL21179.1| ribonucleoside-diphosphate reductase 1, beta subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62128484|gb|AAX66187.1| ribonucleoside-diphosphate reductase 1, beta subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161362365|gb|ABX66133.1| hypothetical protein SPAB_00707 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194401240|gb|ACF61462.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407683|gb|ACF67902.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194710775|gb|ACF89996.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195631367|gb|EDX49927.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197211340|gb|ACH48737.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240760|gb|EDY23380.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289678|gb|EDY29041.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197936804|gb|ACH74137.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199604700|gb|EDZ03245.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204321615|gb|EDZ06814.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205325266|gb|EDZ13105.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329222|gb|EDZ15986.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205338588|gb|EDZ25352.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205344845|gb|EDZ31609.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205349363|gb|EDZ35994.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709500|emb|CAR33844.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224467765|gb|ACN45595.1| ribonucleotide-diphosphate reductase beta subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261247486|emb|CBG25313.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994368|gb|ACY89253.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158836|emb|CBW18349.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913268|dbj|BAJ37242.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320086715|emb|CBY96487.1| ribonucleoside diphosphage reductase 1, beta subunit, B2 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321223022|gb|EFX48093.1| Ribonucleotide reductase of class Ia aerobic, beta subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322617030|gb|EFY13936.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617664|gb|EFY14563.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624706|gb|EFY21535.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630255|gb|EFY27025.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634436|gb|EFY31169.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322639146|gb|EFY35838.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640143|gb|EFY36809.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645769|gb|EFY42293.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651544|gb|EFY47919.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656105|gb|EFY52404.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659457|gb|EFY55704.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665919|gb|EFY62102.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669843|gb|EFY65984.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673828|gb|EFY69925.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678586|gb|EFY74642.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683618|gb|EFY79632.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687694|gb|EFY83664.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322715327|gb|EFZ06898.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323130608|gb|ADX18038.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323196209|gb|EFZ81366.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198377|gb|EFZ83479.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204185|gb|EFZ89196.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208571|gb|EFZ93510.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212337|gb|EFZ97160.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218256|gb|EGA02966.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222986|gb|EGA07335.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227421|gb|EGA11586.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232251|gb|EGA16354.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235716|gb|EGA19800.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323241124|gb|EGA25160.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244866|gb|EGA28868.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248577|gb|EGA32508.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251597|gb|EGA35465.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255474|gb|EGA39237.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263076|gb|EGA46622.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323268136|gb|EGA51613.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270771|gb|EGA54209.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326624097|gb|EGE30442.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332989211|gb|AEF08194.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 376 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 >gi|153819185|ref|ZP_01971852.1| ribonucleoside-diphosphate reductase 1 subunit beta [Vibrio cholerae NCTC 8457] gi|126510271|gb|EAZ72865.1| ribonucleoside-diphosphate reductase 1 subunit beta [Vibrio cholerae NCTC 8457] Length = 171 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +E +Q+S + EA E +A G Sbjct: 31 RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAEYLFKDGS 90 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GLEP + T NP PW++ Sbjct: 91 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWIN 132 >gi|170726650|ref|YP_001760676.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella woodyi ATCC 51908] gi|169811997|gb|ACA86581.1| Ribonucleoside-diphosphate reductase [Shewanella woodyi ATCC 51908] Length = 376 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 5/100 (5%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +I Q ++P + KE +Q++ + +A E +A G Sbjct: 237 RDEALHLNSTQHIIKLMQAGKDDPEMGEIAKECEQQAYDIFVKAAEQEKEWARYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96 +GLN QY+++I N R + L+ + NP PWM Sbjct: 297 MIGLNEQILCQYVEYITNERMKSVNLDLPYAQITNPLPWM 336 >gi|327312835|ref|YP_004328272.1| ribonucleoside-diphosphate reductase subunit beta [Prevotella denticola F0289] gi|326946303|gb|AEA22188.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella denticola F0289] Length = 348 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 8/127 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I ++K E P ++T + + M+ E EIA+ + GLN Sbjct: 220 RDENTHLWLFRSIILELKKEEPDMFTSDKIKVYEDMMREGVRQEIAWGQYVIGNDVQGLN 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKKEK-NFFETRVTE 115 Y++++ N R +G F Y +N W+ + + K +FFE + T Sbjct: 280 EQMVSDYIRYLGNLRWSGLGFG--FLYDDNRKEPENMKWVGQYSNANMVKTDFFEAKSTA 337 Query: 116 YQQGAEL 122 Y + L Sbjct: 338 YAKSTAL 344 >gi|325268390|ref|ZP_08135022.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella multiformis DSM 16608] gi|324989244|gb|EGC21195.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella multiformis DSM 16608] Length = 348 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 8/130 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I ++K E P ++T + + M+ E EIA+ + GLN Sbjct: 220 RDENTHLWLFRSIILELKKEEPDMFTPDRIKVYEDMMREGVRQEIAWGQYVIGNDVQGLN 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKKEK-NFFETRVTE 115 Y++++ N R +G F Y +N W+ + + K +FFE + T Sbjct: 280 EQMVSDYIRYLGNLRWSGLGFG--FLYDDNRKEPENMKWVGQYSNANMVKTDFFEAKSTA 337 Query: 116 YQQGAELKWD 125 Y + L D Sbjct: 338 YAKSTALADD 347 >gi|157375444|ref|YP_001474044.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sediminis HAW-EB3] gi|157317818|gb|ABV36916.1| Ribonucleoside-diphosphate reductase [Shewanella sediminis HAW-EB3] Length = 376 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 7/102 (6%) Query: 2 RDESLHLNFGIDVINQI---KIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG 56 RDE+LHL+ G I ++ ++P + +E ++ R + + E +A G Sbjct: 237 RDEALHLS-GTQHILKLWANGNDDPEMVEVCQELREAGRQVFLDVVEQEKEWADYLFKDG 295 Query: 57 -FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLNA +QY+++I+N R IG E F NP PW++ Sbjct: 296 SMIGLNAEILKQYIEYISNNRMEAIGYEAPFAIKNNPLPWIN 337 >gi|90409249|ref|ZP_01217354.1| ribonucleotide-diphosphate reductase beta subunit [Psychromonas sp. CNPT3] gi|90309647|gb|EAS37827.1| ribonucleotide-diphosphate reductase beta subunit [Psychromonas sp. CNPT3] Length = 381 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN ++N ++P + E K R + A E +A G Sbjct: 242 RDEALHLNSTQQILNIWADGKDDPEMAEIAIECHAKGRDIFLTAAAQEKEWAAYLFKDGS 301 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I+N R IG E F+ NP PW++ Sbjct: 302 MIGLNEVILCQYVEYISNVRMQAIGYEAPFEIKNNPIPWIN 342 >gi|327394563|dbj|BAK11985.1| ribonucleoside-diphosphate reductase 1 beta subunit NrdB [Pantoea ananatis AJ13355] Length = 376 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT----MLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ KE + R + +A L E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRTGEDDPEMKEIAAECREECFELFKKAALQEKEWAEYLFSGGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLDLPFETRSNPIPWIN 337 >gi|94499220|ref|ZP_01305758.1| ribonucleotide-diphosphate reductase beta subunit [Oceanobacter sp. RED65] gi|94428852|gb|EAT13824.1| ribonucleotide-diphosphate reductase beta subunit [Oceanobacter sp. RED65] Length = 376 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 7/102 (6%) Query: 2 RDESLHLNFGIDVINQI---KIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG 56 RDE+LHL G + QI ++P + E +++ + EA E +A G Sbjct: 237 RDEALHLT-GTQHMMQIWALGKDDPEMGEIANECKKQVIEIFREAAQQEKDWAEYLFKDG 295 Query: 57 -FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N+R IGL+ +F+ +NP PW++ Sbjct: 296 SMIGLNKDILCQYVEYITNQRLGAIGLDNIFETRQNPIPWIN 337 >gi|229505158|ref|ZP_04394668.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae BX 330286] gi|229511170|ref|ZP_04400649.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae B33] gi|229515628|ref|ZP_04405087.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae TMA 21] gi|229518289|ref|ZP_04407733.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae RC9] gi|229521368|ref|ZP_04410787.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae TM 11079-80] gi|229525854|ref|ZP_04415259.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae bv. albensis VL426] gi|229529665|ref|ZP_04419055.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae 12129(1)] gi|229608178|ref|YP_002878826.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio cholerae MJ-1236] gi|229333439|gb|EEN98925.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae 12129(1)] gi|229339435|gb|EEO04452.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae bv. albensis VL426] gi|229341466|gb|EEO06469.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae TM 11079-80] gi|229345004|gb|EEO09978.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae RC9] gi|229347397|gb|EEO12357.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae TMA 21] gi|229351135|gb|EEO16076.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae B33] gi|229357381|gb|EEO22298.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae BX 330286] gi|229370833|gb|ACQ61256.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae MJ-1236] Length = 381 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +E +Q+S + EA E +A G Sbjct: 241 RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAEYLFKDGS 300 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GLEP + T NP PW++ Sbjct: 301 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWIN 342 >gi|291618170|ref|YP_003520912.1| NrdB [Pantoea ananatis LMG 20103] gi|291153200|gb|ADD77784.1| NrdB [Pantoea ananatis LMG 20103] Length = 387 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT----MLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ KE + R + +A L E +A G Sbjct: 248 RDEALHLTGTQHMLNLLRTGEDDPEMKEIAAECREECFELFKKAALQEKEWAEYLFSGGS 307 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 308 MIGLNKDILCQYIEYITNIRMQAVGLDLPFETRSNPIPWIN 348 >gi|121590730|ref|ZP_01678061.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae 2740-80] gi|147674333|ref|YP_001216820.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio cholerae O395] gi|153212320|ref|ZP_01948108.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae 1587] gi|153801907|ref|ZP_01956493.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae MZO-3] gi|153823603|ref|ZP_01976270.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae B33] gi|153827294|ref|ZP_01979961.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae MZO-2] gi|153829732|ref|ZP_01982399.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae 623-39] gi|227081427|ref|YP_002809978.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae M66-2] gi|254291706|ref|ZP_04962493.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae AM-19226] gi|254848379|ref|ZP_05237729.1| ribonucleoside-diphosphate reductase [Vibrio cholerae MO10] gi|297578847|ref|ZP_06940775.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio cholerae RC385] gi|298498653|ref|ZP_07008460.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae MAK 757] gi|9655738|gb|AAF94414.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547411|gb|EAX57522.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae 2740-80] gi|124116698|gb|EAY35518.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae 1587] gi|124122552|gb|EAY41295.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae MZO-3] gi|126518882|gb|EAZ76105.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae B33] gi|146316216|gb|ABQ20755.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae O395] gi|148874766|gb|EDL72901.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae 623-39] gi|149738785|gb|EDM53127.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae MZO-2] gi|150422390|gb|EDN14350.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae AM-19226] gi|227009315|gb|ACP05527.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae M66-2] gi|227013172|gb|ACP09382.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae O395] gi|254844084|gb|EET22498.1| ribonucleoside-diphosphate reductase [Vibrio cholerae MO10] gi|297536441|gb|EFH75274.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio cholerae RC385] gi|297542986|gb|EFH79036.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae MAK 757] Length = 389 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +E +Q+S + EA E +A G Sbjct: 249 RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAEYLFKDGS 308 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GLEP + T NP PW++ Sbjct: 309 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWIN 350 >gi|161582009|ref|NP_230900.2| ribonucleotide-diphosphate reductase subunit beta [Vibrio cholerae O1 biovar El Tor str. N16961] gi|255745652|ref|ZP_05419600.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholera CIRS 101] gi|262159072|ref|ZP_06030184.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae INDRE 91/1] gi|262169430|ref|ZP_06037122.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae RC27] gi|262191406|ref|ZP_06049594.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae CT 5369-93] gi|255736727|gb|EET92124.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholera CIRS 101] gi|262022243|gb|EEY40952.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae RC27] gi|262029257|gb|EEY47909.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae INDRE 91/1] gi|262032695|gb|EEY51245.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae CT 5369-93] gi|327483944|gb|AEA78351.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Vibrio cholerae LMA3894-4] Length = 377 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +E +Q+S + EA E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GLEP + T NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWIN 338 >gi|322832009|ref|YP_004212036.1| Ribonucleoside-diphosphate reductase [Rahnella sp. Y9602] gi|321167210|gb|ADW72909.1| Ribonucleoside-diphosphate reductase [Rahnella sp. Y9602] Length = 376 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +N ++ ++P + E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHALNLLRSGQDDPEMAEIALECQQECHDLFVLAAQQEKDWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ FK NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDAPFKTRSNPIPWIN 337 >gi|325859841|ref|ZP_08172971.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella denticola CRIS 18C-A] gi|325482767|gb|EGC85770.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella denticola CRIS 18C-A] Length = 348 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 8/127 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I ++K E P ++T + + M+ E EIA+ + GLN Sbjct: 220 RDENTHLWLFRSIILELKKEEPDMFTPDRIKVYEDMMREGVRQEIAWGQYVIGNDVQGLN 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKKEK-NFFETRVTE 115 Y++++ N R +G F Y +N W+ + + K +FFE + T Sbjct: 280 EQMVSDYIRYLGNLRWSGLGFG--FLYDDNRKEPENMKWVGQYSNANMVKTDFFEAKSTA 337 Query: 116 YQQGAEL 122 Y + L Sbjct: 338 YAKSTAL 344 >gi|323337480|gb|EGA78728.1| Rnr4p [Saccharomyces cerevisiae Vin13] Length = 328 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 2/99 (2%) Query: 24 HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE 83 HL TK + ++ EA +E Y ++P G++ S Y++F+A+ G E Sbjct: 216 HLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMDLKSIHTYIEFVADGLLQGFGNE 275 Query: 84 PLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122 + NPF +M +V K FFE +V++YQ+ +++ Sbjct: 276 KYYNAV-NPFEFMEDVATAGK-TTFFEKKVSDYQKASDM 312 >gi|160915703|ref|ZP_02077911.1| hypothetical protein EUBDOL_01712 [Eubacterium dolichum DSM 3991] gi|158432179|gb|EDP10468.1| hypothetical protein EUBDOL_01712 [Eubacterium dolichum DSM 3991] Length = 353 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++ ++K E P L+T E + + ML E+ +A + + GL Sbjct: 225 RDENTHLWLFRSILLELKKEEPQLFTPEHIEIYKGMLKHGVEEEVKWAEYVLGERMEGLT 284 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 Y+ ++ N R + +G L+ Y + P W+S + K +FFE + T Y Sbjct: 285 MEMVADYIHYLGNLRSNALGFGSLYDGYEKEPASMEWVSMYSNANIIKTDFFEAKSTAYA 344 Query: 118 QGAEL 122 + + L Sbjct: 345 KSSAL 349 >gi|207345015|gb|EDZ71971.1| YGR180Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 224 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 2/99 (2%) Query: 24 HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE 83 HL TK + ++ EA +E Y ++P G++ S Y++F+A+ G E Sbjct: 112 HLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMDLKSIHTYIEFVADGLLQGFGNE 171 Query: 84 PLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122 + NPF +M +V K FFE +V++YQ+ +++ Sbjct: 172 KYYNAV-NPFEFMEDVATAGK-TTFFEKKVSDYQKASDM 208 >gi|222475861|ref|YP_002564382.1| ribonucleotide reductase [Halorubrum lacusprofundi ATCC 49239] gi|222454232|gb|ACM58496.1| ribonucleotide reductase [Halorubrum lacusprofundi ATCC 49239] Length = 336 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 59/121 (48%), Gaps = 4/121 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60 ++E +H FG+++++ I+ ENP L+ EF+ + R A E+ +G + L Sbjct: 205 KEEQIHGLFGVELVDTIREENPGLFDDEFEAEIREACRRAYEAEMGMLDWIFGEGELQFL 264 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117 ++++ N+ +G+ P+F+ ++ W E I + K+ +FF R T Y Sbjct: 265 PREYVNEFLKDRFNQSLENVGVYPMFETDDDLLDETRWFDEDIMMTKDNDFFSKRSTTYN 324 Query: 118 Q 118 + Sbjct: 325 K 325 >gi|52425023|ref|YP_088160.1| ribonucleotide-diphosphate reductase subunit beta [Mannheimia succiniciproducens MBEL55E] gi|52307075|gb|AAU37575.1| NrdF protein [Mannheimia succiniciproducens MBEL55E] Length = 376 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q++ + A E A+A G Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQEKAWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F+ NP PW++ Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWIN 337 >gi|6321619|ref|NP_011696.1| Rnr4p [Saccharomyces cerevisiae S288c] gi|1710402|sp|P49723|RIR4_YEAST RecName: Full=Ribonucleoside-diphosphate reductase small chain 2; AltName: Full=Ribonucleotide reductase R2 subunit 2; AltName: Full=Ribonucleotide reductase small subunit 2 gi|15826570|pdb|1JK0|B Chain B, Ribonucleotide Reductase Y2y4 Heterodimer gi|52695527|pdb|1SMS|A Chain A, Structure Of The Ribonucleotide Reductase Rnr4 Homodimer From Saccharomyces Cerevisiae gi|52695528|pdb|1SMS|B Chain B, Structure Of The Ribonucleotide Reductase Rnr4 Homodimer From Saccharomyces Cerevisiae gi|915546|gb|AAB72236.1| Rnr4p [Saccharomyces cerevisiae] gi|1323319|emb|CAA97206.1| RNR4 [Saccharomyces cerevisiae] gi|285812375|tpg|DAA08275.1| TPA: Rnr4p [Saccharomyces cerevisiae S288c] gi|323304781|gb|EGA58540.1| Rnr4p [Saccharomyces cerevisiae FostersB] gi|323308943|gb|EGA62174.1| Rnr4p [Saccharomyces cerevisiae FostersO] Length = 345 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 2/99 (2%) Query: 24 HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE 83 HL TK + ++ EA +E Y ++P G++ S Y++F+A+ G E Sbjct: 233 HLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMDLKSIHTYIEFVADGLLQGFGNE 292 Query: 84 PLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122 + NPF +M +V K FFE +V++YQ+ +++ Sbjct: 293 KYYNAV-NPFEFMEDVATAGK-TTFFEKKVSDYQKASDM 329 >gi|37526941|ref|NP_930285.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus luminescens subsp. laumondii TTO1] gi|36786374|emb|CAE15427.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotide reductase 1) (B2 protein) (R2 protein) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 376 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + KE +Q+ + +A E +A +G Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAKECEQQCYDLFVQAAEQEKEWADYLFSEGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLKLPFETRSNPIPWIN 337 >gi|51830370|gb|AAU09736.1| YGR180C [Saccharomyces cerevisiae] Length = 345 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 2/99 (2%) Query: 24 HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE 83 HL TK + ++ EA +E Y ++P G++ S Y++F+A+ G E Sbjct: 233 HLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMDLKSIHTYIEFVADGLLQGFGNE 292 Query: 84 PLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122 + NPF +M +V K FFE +V++YQ+ +++ Sbjct: 293 KYYNAV-NPFEFMEDVATAGK-TTFFEKKVSDYQKASDM 329 >gi|151943458|gb|EDN61769.1| ribonucleotide reductase [Saccharomyces cerevisiae YJM789] gi|190406805|gb|EDV10072.1| ribonucleotide reductase [Saccharomyces cerevisiae RM11-1a] gi|256270921|gb|EEU06048.1| Rnr4p [Saccharomyces cerevisiae JAY291] gi|259146684|emb|CAY79941.1| Rnr4p [Saccharomyces cerevisiae EC1118] gi|323333575|gb|EGA74969.1| Rnr4p [Saccharomyces cerevisiae AWRI796] gi|323348450|gb|EGA82695.1| Rnr4p [Saccharomyces cerevisiae Lalvin QA23] Length = 345 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 2/99 (2%) Query: 24 HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE 83 HL TK + ++ EA +E Y ++P G++ S Y++F+A+ G E Sbjct: 233 HLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMDLKSIHTYIEFVADGLLQGFGNE 292 Query: 84 PLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122 + NPF +M +V K FFE +V++YQ+ +++ Sbjct: 293 KYYNAV-NPFEFMEDVATAGK-TTFFEKKVSDYQKASDM 329 >gi|18656506|gb|AAL77807.1|AF389451_14 ribonucleoside-diphosphate reductase beta subunit [Tiger frog virus] Length = 387 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 10/127 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEF-----QQKSRTMLHEATLLEIAYAHETMPK 55 +RDE++H+ + + E P + TK+ + R E +++A+ E P Sbjct: 252 VRDENIHVEGVSKLFETLNSEYPWVVTKDIIELFKEDAERVAELEEAFVDLAF-QECGP- 309 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDLKKEKNFFETRV 113 L + Y+ ++ N R +GL L + P PW+ +ID NFFE V Sbjct: 310 -VCELEPKQVKDYVLYVINLRAANMGLPKLIERAPEACPIPWVKWLIDGADLTNFFENHV 368 Query: 114 TEYQQGA 120 TEY+ G Sbjct: 369 TEYETGG 375 >gi|319760602|ref|YP_004124540.1| ribonucleoside-diphosphate reductase 1 subunit beta [Candidatus Blochmannia vafer str. BVAF] gi|318039316|gb|ADV33866.1| ribonucleoside-diphosphate reductase 1 subunit beta [Candidatus Blochmannia vafer str. BVAF] Length = 376 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 5/102 (4%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDESLHL+ ++N Q ++P + + +Q +S + A E +AH G Sbjct: 237 RDESLHLSATQHILNLMQSGADDPEMAEISLMYQSESYNLFLMAAEQEKMWAHYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE 98 +GLN QY+++I N R IGL+ F N PW++ Sbjct: 297 MIGLNKEILCQYIEYITNIRMQAIGLKAPFHIKANVIPWINS 338 >gi|225734460|gb|ACO25228.1| hypothetical protein [Epizootic haematopoietic necrosis virus] Length = 387 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 10/127 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEF-----QQKSRTMLHEATLLEIAYAHETMPK 55 +RDE++H+ + + E P + ++ + R E +++A+ E P Sbjct: 252 VRDENMHVEGVSKLFETLNSEYPWVVNEDLIELFKEDAERVAELEEAFVDLAF-QECGP- 309 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDLKKEKNFFETRV 113 GL + Y+ ++ N R +GL L + P PW+ +ID NFFE V Sbjct: 310 -VCGLEPKQVKDYVLYVINLRASNMGLPRLIERAPEACPIPWVKWLIDGADLTNFFENHV 368 Query: 114 TEYQQGA 120 TEY+ G Sbjct: 369 TEYETGG 375 >gi|12642668|gb|AAK00340.1| ribonucleotide reductase small subunit [Bovine herpesvirus 2] Length = 313 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 7/118 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N +P K + R + EA +EIA+ MP+ L+ Sbjct: 192 RDEAVHTTASCCIYNNYIGAHP----KPPPTRVRQLFLEAVDIEIAFIRAKMPRDGQVLS 247 Query: 62 ---APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 S E Y++F A+R IG +PLF + ++ K NFFE R T Y Sbjct: 248 ESAVASIENYVRFSADRLLCLIGDQPLFNAPPPDANFPLRLMSTDKHTNFFECRSTAY 305 >gi|163803511|ref|ZP_02197381.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp. AND4] gi|159172687|gb|EDP57538.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp. AND4] Length = 377 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDESLHLN +IN ++ +E +Q+ + EA E +A G Sbjct: 237 RDESLHLNGTQHMINLLRNGQDDFIFMQIAEEVKQECFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GL + + T NP PW++ Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPKAYPEATTNPIPWIN 338 >gi|152979144|ref|YP_001344773.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus succinogenes 130Z] gi|150840867|gb|ABR74838.1| Ribonucleoside-diphosphate reductase [Actinobacillus succinogenes 130Z] Length = 376 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q++ + A E A+A G Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F+ NP PW++ Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFEARSNPIPWIN 337 >gi|308187586|ref|YP_003931717.1| ribonucleoside-diphosphate reductase 1 beta chain [Pantoea vagans C9-1] gi|308058096|gb|ADO10268.1| ribonucleoside-diphosphate reductase 1 beta chain [Pantoea vagans C9-1] Length = 376 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT----MLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ KE + R + +A L E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGEDDPEMKEIAAECREECFELFKKAALQEKEWAEYLFSGGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 >gi|221316490|ref|ZP_03598295.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus subtilis subsp. subtilis str. NCIB 3610] Length = 347 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 6/129 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++ I + P L T+EF + E LE + E + K ++ Sbjct: 218 RDEMKHSYFQTILVRDILTQYPELNTEEFSEFVYDFFTELVQLEREFC-EDLYKNTPDID 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS--EVIDLKKEK-NFFETRVTEYQQ 118 ++Y+ + AN +GL+ +F +NP PW++ + +L K +FFE + Y + Sbjct: 277 IEEVKEYIGYRANLILDNLGLDQIFSAKKNPMPWITAFDPDNLNNTKRDFFEDKEVNYGK 336 Query: 119 GAELK--WD 125 E K WD Sbjct: 337 ANEQKNDWD 345 >gi|304398198|ref|ZP_07380072.1| ribonucleotide reductase [Pantoea sp. aB] gi|304354064|gb|EFM18437.1| ribonucleotide reductase [Pantoea sp. aB] Length = 376 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT----MLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ KE + R + +A L E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGEDDPEMKEIAAECREECFELFKKAALQEKEWAEYLFSGGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 >gi|148825799|ref|YP_001290552.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae PittEE] gi|148715959|gb|ABQ98169.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae PittEE] Length = 376 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q++ + A E A+A G Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F+ NP PW++ Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWIN 337 >gi|76803441|ref|YP_327710.1| ribonucleoside-diphosphate reductase, beta subunit 1 [Natronomonas pharaonis DSM 2160] gi|76559256|emb|CAI50863.1| ribonucleoside-diphosphate reductase, beta subunit 1 [Natronomonas pharaonis DSM 2160] Length = 336 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/124 (23%), Positives = 62/124 (50%), Gaps = 4/124 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60 ++E +H FG++++ I+ ENP L+ ++F+++ + A E+ +G + L Sbjct: 205 KEEQIHGLFGVELVETIREENPDLFDEDFEEEVQAACQRAFEAEMKILDWIFGEGELEFL 264 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117 + +++ N+ +G+EP+F+ + W E I + K+ +FF R T Y Sbjct: 265 PRTHVDAFLRDRFNQSLENVGVEPIFEPDDGLLEETRWFDEDIMMTKDNDFFSKRSTTYN 324 Query: 118 QGAE 121 + A+ Sbjct: 325 KHAQ 328 >gi|145633337|ref|ZP_01789068.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus influenzae 3655] gi|144986183|gb|EDJ92773.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus influenzae 3655] Length = 376 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q++ + A E A+A G Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F+ NP PW++ Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWIN 337 >gi|16273547|ref|NP_439802.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae Rd KW20] gi|68250262|ref|YP_249374.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae 86-028NP] gi|145629252|ref|ZP_01785051.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae 22.1-21] gi|145631490|ref|ZP_01787259.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae R3021] gi|145639184|ref|ZP_01794791.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae PittII] gi|145641092|ref|ZP_01796673.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae R3021] gi|260581255|ref|ZP_05849073.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus influenzae RdAW] gi|260582634|ref|ZP_05850423.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus influenzae NT127] gi|319776092|ref|YP_004138580.1| ribonucleoside-diphosphate reductase subunit beta [Haemophilus influenzae F3047] gi|319896901|ref|YP_004135096.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus influenzae F3031] gi|329123256|ref|ZP_08251824.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus aegyptius ATCC 11116] gi|1172943|sp|P43755|RIR2_HAEIN RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit gi|1574510|gb|AAC23306.1| ribonucleoside diphosphate reductase, beta chain (nrdB) [Haemophilus influenzae Rd KW20] gi|68058461|gb|AAX88714.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus influenzae 86-028NP] gi|144978755|gb|EDJ88478.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae 22.1-21] gi|144982920|gb|EDJ90433.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae R3021] gi|145271746|gb|EDK11656.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae PittII] gi|145274253|gb|EDK14118.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae 22.4-21] gi|260092082|gb|EEW76027.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus influenzae RdAW] gi|260094306|gb|EEW78205.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus influenzae NT127] gi|301170418|emb|CBW30024.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Haemophilus influenzae 10810] gi|309750762|gb|ADO80746.1| Ribonucleoside diphosphate reductase 1, beta subunit [Haemophilus influenzae R2866] gi|309972945|gb|ADO96146.1| Ribonucleoside diphosphate reductase 1, beta subunit [Haemophilus influenzae R2846] gi|317432405|emb|CBY80760.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus influenzae F3031] gi|317450683|emb|CBY86903.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus influenzae F3047] gi|327471465|gb|EGF16913.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus aegyptius ATCC 11116] Length = 376 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q++ + A E A+A G Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F+ NP PW++ Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWIN 337 >gi|262402402|ref|ZP_06078963.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio sp. RC586] gi|262351184|gb|EEZ00317.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio sp. RC586] Length = 360 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +E +Q+S + EA E +A G Sbjct: 220 RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAAYLFKDGS 279 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GLEP + T NP PW++ Sbjct: 280 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPTATTNPIPWIN 321 >gi|289664735|ref|ZP_06486316.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 349 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I EN L E A LE + E + G G++ Sbjct: 221 RDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETVWTAEVL-DGIDGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++ Sbjct: 280 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 339 >gi|120598753|ref|YP_963327.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp. W3-18-1] gi|146293170|ref|YP_001183594.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella putrefaciens CN-32] gi|120558846|gb|ABM24773.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Shewanella sp. W3-18-1] gi|145564860|gb|ABP75795.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Shewanella putrefaciens CN-32] gi|319426318|gb|ADV54392.1| ribonucleotide reductase [Shewanella putrefaciens 200] Length = 376 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 5/100 (5%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN ++N Q ++P + + QQ++ + +A E +A G Sbjct: 237 RDEALHLNSTQHILNIMQGGKDDPEMGEIAAQCQQEAYDLFLKAAEQEKEWAKYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96 +GLN QY++FI N+R + L + + NP PWM Sbjct: 297 MIGLNEQILCQYVEFITNQRMKSVNLPQPYPESTNPLPWM 336 >gi|326784480|ref|YP_004325029.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM7] gi|310004513|gb|ADO98905.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM7] Length = 388 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 24/135 (17%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTK------------EFQQKSRTMLHEATLLEIAYA 49 RDES HL V+ Q ++N WT+ E Q+ M E A+A Sbjct: 247 RDESQHL-----VLTQQILKN---WTEGKDDPEMKEIAEEEQETVEQMFKACVDEEKAWA 298 Query: 50 HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK--YTENPFPWMSEVIDLKKEK 106 + +G +GLN Y+++IANRR IGL+P++ NP PW ++ K ++ Sbjct: 299 NYLFKEGSMIGLNERLLHNYVEWIANRRMKAIGLKPIYDQPLRNNPLPWTEHWLNSKGQQ 358 Query: 107 NF-FETRVTEYQQGA 120 N ET + Y G Sbjct: 359 NAPQETEIESYVVGG 373 >gi|78049716|ref|YP_365891.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78038146|emb|CAJ25891.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 347 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I EN L E A LE + E + G G++ Sbjct: 219 RDELAHTKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++ Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337 >gi|261211025|ref|ZP_05925315.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio sp. RC341] gi|260840000|gb|EEX66600.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio sp. RC341] Length = 360 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +E +Q+S + EA E +A G Sbjct: 220 RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAAYLFKDGS 279 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GLEP + T NP PW++ Sbjct: 280 MIGLNRDILCQYVEYITNIRMQAVGLEPAYPTATTNPIPWIN 321 >gi|113970253|ref|YP_734046.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp. MR-4] gi|114047558|ref|YP_738108.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp. MR-7] gi|113884937|gb|ABI38989.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Shewanella sp. MR-4] gi|113889000|gb|ABI43051.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Shewanella sp. MR-7] Length = 376 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 5/100 (5%) Query: 2 RDESLHLNFG--IDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN I I Q ++P + E QQ++ + +A E +A G Sbjct: 237 RDEALHLNSTQHILTIMQAGKDDPEMGEIAAECQQEAYNLFLKAAEQEKEWAKYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96 +GLN QY+++I N+R + L + NP PWM Sbjct: 297 MIGLNEQILCQYVEYITNQRMKSVNLPQPYAEQSNPLPWM 336 >gi|238021387|ref|ZP_04601813.1| hypothetical protein GCWU000324_01286 [Kingella oralis ATCC 51147] gi|237868367|gb|EEP69373.1| hypothetical protein GCWU000324_01286 [Kingella oralis ATCC 51147] Length = 384 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 8/103 (7%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLWTK---EFQQKSRTMLHEATLLEIAYAHETMPKG 56 RDE+LHL ++N ++ E W + E Q + + +A E +A G Sbjct: 244 RDEALHLTSTQHMLNLMRGGAEGAE-WAEIAAELQNECFELFKKAAEQEKEWAEYLFKDG 302 Query: 57 -FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GL+P F K T+NP PW++ Sbjct: 303 SMIGLNKDILCQYVEYITNARMLAVGLQPAFEKATQNPIPWIN 345 >gi|332292139|ref|YP_004430748.1| ATP-cone domain protein [Krokinobacter diaphorus 4H-3-7-5] gi|332170225|gb|AEE19480.1| ATP-cone domain protein [Krokinobacter diaphorus 4H-3-7-5] Length = 425 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 58/131 (44%), Gaps = 18/131 (13%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE------IAYAHET--M 53 ++E +H +FGID+I IK ENP + E + M EA E I A E + Sbjct: 294 KEEQIHGDFGIDIIKIIKAENPEWFDAEHSATVQEMCKEAFKAESNIVDWIFEAGELDFL 353 Query: 54 PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFE 110 PK V ++++ N+ IG+EP+F+ E W + I K +FF Sbjct: 354 PKALVN-------EFIKDRFNKSLTSIGIEPVFEVDETLLKDAEWFDDEIIGTKHGDFFV 406 Query: 111 TRVTEYQQGAE 121 R Y + A+ Sbjct: 407 KRSVNYTKRAQ 417 >gi|15616797|ref|NP_240009.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681552|ref|YP_002467937.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682108|ref|YP_002468492.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471235|ref|ZP_05635234.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11134533|sp|P57275|RIR2_BUCAI RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit gi|25285834|pir||G84950 ribonucleoside-diphosphate reductase (EC 1.17.4.1) nrdB [imported] - Buchnera sp. (strain APS) gi|10038860|dbj|BAB12895.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219621841|gb|ACL29997.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624395|gb|ACL30550.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311087074|gb|ADP67154.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 376 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 5/102 (4%) Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + EN E ++++ + A E +A G Sbjct: 237 RDEALHLTGTQHILNLLSNIKNNENMEDVVLECKEEAINIFISAAQQEKKWASYLFKSGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE 98 +GLN QY+++I N R H IG + FK NP PW+++ Sbjct: 297 MLGLNKDILCQYIEYITNIRMHAIGFKMPFKKQSNPIPWIND 338 >gi|323945045|gb|EGB41110.1| nrdB protein [Escherichia coli H120] gi|333002093|gb|EGK21659.1| ribonucleoside-diphosphate reductase 1 subunit beta domain protein [Shigella flexneri K-218] Length = 178 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 39 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 98 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 99 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 139 >gi|297521777|ref|ZP_06940163.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli OP50] Length = 174 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 35 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 94 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 95 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 135 >gi|330445621|ref|ZP_08309273.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489812|dbj|GAA03770.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 377 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E +Q+ + A E +A G Sbjct: 237 RDEALHLTGTQHILNLLRTGQDDPEMAEIAVECEQECFDIFKSAAEQEKDWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL P ++ T+NP PW++ Sbjct: 297 MIGLNKQILCQYVEYITNLRMSAVGLRPAYEGATQNPIPWIN 338 >gi|323650974|ref|YP_004243617.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus subtilis subsp. natto] gi|323461614|dbj|BAJ77030.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus subtilis subsp. natto] Length = 347 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 4/127 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++ I + P L T+EF + E LE + E + K ++ Sbjct: 218 RDEMKHSYFQTILVRDILTQYPELNTEEFSEFVYDFFTELVQLEREFC-EDLYKNTPDID 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS--EVIDLKKEK-NFFETRVTEYQQ 118 ++Y+ + AN +GL+ +F +NP PW++ + +L K +FFE + Y + Sbjct: 277 IEEVKEYIGYRANLILDNLGLDQIFAAKKNPMPWITAFDPDNLNNTKRDFFEDKEVNYGK 336 Query: 119 GAELKWD 125 E K D Sbjct: 337 ANEQKND 343 >gi|293395206|ref|ZP_06639492.1| ribonucleoside-diphosphate reductase [Serratia odorifera DSM 4582] gi|291422383|gb|EFE95626.1| ribonucleoside-diphosphate reductase [Serratia odorifera DSM 4582] Length = 376 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGADDPEMAEIAVECQQQCYDLFVLAAQQEKEWAEYLFSGGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL FK NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGAPFKTRSNPIPWIN 337 >gi|145634465|ref|ZP_01790175.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus influenzae PittAA] gi|229845068|ref|ZP_04465204.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae 6P18H1] gi|229846892|ref|ZP_04466999.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae 7P49H1] gi|145268445|gb|EDK08439.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus influenzae PittAA] gi|229810381|gb|EEP46100.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae 7P49H1] gi|229812040|gb|EEP47733.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae 6P18H1] Length = 376 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + L +E +Q++ + A E A+A G Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDLEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F+ NP PW++ Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWIN 337 >gi|21244791|ref|NP_644373.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas axonopodis pv. citri str. 306] gi|325927516|ref|ZP_08188754.1| ribonucleotide reductase, beta subunit [Xanthomonas perforans 91-118] gi|21110489|gb|AAM38909.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas axonopodis pv. citri str. 306] gi|325542109|gb|EGD13613.1| ribonucleotide reductase, beta subunit [Xanthomonas perforans 91-118] Length = 347 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I EN L E A LE + E + G G++ Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++ Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337 >gi|255928974|ref|YP_003097286.1| ribonucleotide reductase B subunit [Synechococcus phage S-RSM4] gi|255705260|emb|CAR63249.1| ribonucleotide reductase B subunit [Synechococcus phage S-RSM4] Length = 394 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 6/100 (6%) Query: 2 RDESLHLNFGIDVINQIK-IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 RDES H+ +++N+ K ++P + KE ++ M + E +A G Sbjct: 254 RDESQHMTITQNILNKWKEGDDPEMVQIAKEEEENVYDMFRQCVEEEKLWAEYLFKDGSI 313 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFK--YTENPFPW 95 +GLN +Y+++ ANRR IGL+ +F + NP PW Sbjct: 314 IGLNDKLLSKYVEWTANRRLKSIGLKAIFDTPVSNNPLPW 353 >gi|58580098|ref|YP_199114.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas oryzae pv. oryzae KACC10331] gi|84622097|ref|YP_449469.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|58424692|gb|AAW73729.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas oryzae pv. oryzae KACC10331] gi|84366037|dbj|BAE67195.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 347 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I EN L E A LE + E + G G++ Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++ Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337 >gi|326782933|ref|YP_004323331.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-RSM4] gi|310004192|gb|ADO98586.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-RSM4] Length = 388 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 15/130 (11%) Query: 2 RDESLHLNFGIDVI-NQIKIENPHLWTKEFQQK-------SRTMLHEATLLEIAYAHETM 53 RDES HL +++ N K ++ + ++K RT+ E T + +M Sbjct: 248 RDESQHLVITQNILKNWAKGDDSEMAEIAKEEKPFVVDMFKRTVEEEKTWANYLFREGSM 307 Query: 54 PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEKNF-FE 110 +GLN Y+++IANRR IGL+P+F NP PW ++ K ++N E Sbjct: 308 ----IGLNDRLLHNYVEWIANRRMKAIGLDPVFDQVARNNPLPWTQHWLNSKGQQNAPQE 363 Query: 111 TRVTEYQQGA 120 T + Y G Sbjct: 364 TEIESYVVGG 373 >gi|56460472|ref|YP_155753.1| ribonucleotide-diphosphate reductase subunit beta [Idiomarina loihiensis L2TR] gi|56179482|gb|AAV82204.1| Ribonucleotide reductase, beta subunit [Idiomarina loihiensis L2TR] Length = 377 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 6/105 (5%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE++HL ++N Q ++P + +E + + + A E +AH G Sbjct: 237 RDENVHLTSTQHILNLWQYGEDDPEMKEIAEELRDDAYEIFMTAVKQEKQWAHYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVI 100 +GLN QY+++IAN R IG + P NP PWM++ + Sbjct: 297 MIGLNESMLCQYVEYIANLRMQAIGFDAPFENQRSNPLPWMNKYL 341 >gi|311085920|gb|ADP66002.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086491|gb|ADP66572.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087626|gb|ADP67705.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 359 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 5/102 (4%) Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + EN E ++++ + A E +A G Sbjct: 220 RDEALHLTGTQHILNLLSNIKNNENMEDVVLECKEEAINIFISAAQQEKKWASYLFKSGS 279 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE 98 +GLN QY+++I N R H IG + FK NP PW+++ Sbjct: 280 MLGLNKDILCQYIEYITNIRMHAIGFKMPFKKQSNPIPWIND 321 >gi|188578920|ref|YP_001915849.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas oryzae pv. oryzae PXO99A] gi|188523372|gb|ACD61317.1| ribonucleoside-diphosphate reductase, beta subunit [Xanthomonas oryzae pv. oryzae PXO99A] Length = 347 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I EN L E A LE + E + G G++ Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++ Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337 >gi|166710317|ref|ZP_02241524.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas oryzae pv. oryzicola BLS256] Length = 347 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I EN L E A LE + E + G G++ Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAINLETQWTAEVL-DGIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++ Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337 >gi|332093862|gb|EGI98916.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella boydii 5216-82] Length = 376 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 >gi|218690398|ref|YP_002398610.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli ED1a] gi|218427962|emb|CAR08882.2| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Escherichia coli ED1a] Length = 376 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 >gi|153835812|ref|ZP_01988479.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio harveyi HY01] gi|148867435|gb|EDL66832.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio harveyi HY01] Length = 377 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +IN ++ +E +Q+ + EA E +A G Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFSFMQIAEEAKQECFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GL + + T NP PW++ Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATSNPIPWIN 338 >gi|312967536|ref|ZP_07781751.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia coli 2362-75] gi|312287733|gb|EFR15638.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia coli 2362-75] Length = 359 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 220 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 279 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 280 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 320 >gi|15802782|ref|NP_288809.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 EDL933] gi|15832372|ref|NP_311145.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 str. Sakai] gi|16130170|ref|NP_416738.1| ribonucleoside-diphosphate reductase 1, beta subunit, ferritin-like protein [Escherichia coli str. K-12 substr. MG1655] gi|82544520|ref|YP_408467.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii Sb227] gi|82777644|ref|YP_403993.1| ribonucleotide-diphosphate reductase subunit beta [Shigella dysenteriae Sd197] gi|89109052|ref|AP_002832.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Escherichia coli str. K-12 substr. W3110] gi|157161718|ref|YP_001459036.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli HS] gi|170081853|ref|YP_001731173.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like protein [Escherichia coli str. K-12 substr. DH10B] gi|187731010|ref|YP_001881065.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii CDC 3083-94] gi|188495860|ref|ZP_03003130.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli 53638] gi|195935609|ref|ZP_03080991.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 str. EC4024] gi|218548311|ref|YP_002382102.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia fergusonii ATCC 35469] gi|218705765|ref|YP_002413284.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli UMN026] gi|238901409|ref|YP_002927205.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like protein [Escherichia coli BW2952] gi|254794126|ref|YP_003078963.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 str. TW14359] gi|256022083|ref|ZP_05435948.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp. 4_1_40B] gi|261223312|ref|ZP_05937593.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 str. FRIK2000] gi|261259138|ref|ZP_05951671.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 str. FRIK966] gi|293405702|ref|ZP_06649694.1| nrdB [Escherichia coli FVEC1412] gi|293410599|ref|ZP_06654175.1| ribonucleoside-diphosphate reductase [Escherichia coli B354] gi|298381383|ref|ZP_06990982.1| nrdB [Escherichia coli FVEC1302] gi|309785072|ref|ZP_07679705.1| ribonucleoside-diphosphate reductase 1, subunit beta [Shigella dysenteriae 1617] gi|312973510|ref|ZP_07787682.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia coli 1827-70] gi|57014104|sp|P69924|RIR2_ECOLI RecName: Full=Ribonucleoside-diphosphate reductase 1 subunit beta; AltName: Full=Protein B2; AltName: Full=Protein R2; AltName: Full=Ribonucleotide reductase 1 gi|57014105|sp|P69925|RIR2_ECO57 RecName: Full=Ribonucleoside-diphosphate reductase 1 subunit beta; AltName: Full=Protein B2; AltName: Full=Protein R2; AltName: Full=Ribonucleotide reductase 1 gi|12516573|gb|AAG57364.1|AE005456_1 ribonucleoside diphosphage reductase 1, beta subunit, B2 [Escherichia coli O157:H7 str. EDL933] gi|146967|gb|AAA24224.1| ribonucleoside diphosphate reductase B2 subunit precursor [Escherichia coli] gi|1788567|gb|AAC75295.1| ribonucleoside-diphosphate reductase 1, beta subunit, ferritin-like protein [Escherichia coli str. K-12 substr. MG1655] gi|1799582|dbj|BAA16054.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Escherichia coli str. K12 substr. W3110] gi|13362587|dbj|BAB36541.1| ribonucleoside-diphosphate reductase 1 beta subunit [Escherichia coli O157:H7 str. Sakai] gi|81241792|gb|ABB62502.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella dysenteriae Sd197] gi|81245931|gb|ABB66639.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella boydii Sb227] gi|157067398|gb|ABV06653.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli HS] gi|169889688|gb|ACB03395.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like protein [Escherichia coli str. K-12 substr. DH10B] gi|187428002|gb|ACD07276.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella boydii CDC 3083-94] gi|188491059|gb|EDU66162.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli 53638] gi|218355852|emb|CAQ88465.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Escherichia fergusonii ATCC 35469] gi|218432862|emb|CAR13756.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Escherichia coli UMN026] gi|238863475|gb|ACR65473.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like protein [Escherichia coli BW2952] gi|254593526|gb|ACT72887.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like protein [Escherichia coli O157:H7 str. TW14359] gi|284922226|emb|CBG35308.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli 042] gi|291427910|gb|EFF00937.1| nrdB [Escherichia coli FVEC1412] gi|291471067|gb|EFF13551.1| ribonucleoside-diphosphate reductase [Escherichia coli B354] gi|298278825|gb|EFI20339.1| nrdB [Escherichia coli FVEC1302] gi|308927442|gb|EFP72916.1| ribonucleoside-diphosphate reductase 1, subunit beta [Shigella dysenteriae 1617] gi|309702545|emb|CBJ01872.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli ETEC H10407] gi|310332105|gb|EFP99340.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia coli 1827-70] gi|315615496|gb|EFU96128.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia coli 3431] gi|320184866|gb|EFW59654.1| ribonucleotide-diphosphate reductase subunit beta [Shigella flexneri CDC 796-83] gi|320663001|gb|EFX30318.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O55:H7 str. USDA 5905] gi|327252504|gb|EGE64163.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia coli STEC_7v] gi|332094036|gb|EGI99088.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella boydii 3594-74] gi|332344015|gb|AEE57349.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli UMNK88] Length = 376 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 >gi|170767354|ref|ZP_02901807.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia albertii TW07627] gi|170123688|gb|EDS92619.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia albertii TW07627] Length = 376 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 >gi|331035505|gb|AEC53062.1| ribonucleotide reductase subunit B [Synechococcus phage S-CRM01] Length = 381 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQK---SRTMLHEATLLEIAYAHETMPKG-F 57 RDE+ HL ++IN + + K + ++ + ++ A E A+A G Sbjct: 241 RDENQHLFLTQNIINNWRNNDDPEMKKIYNEEIDHTTSLFEAAVDQEKAWAQYLFKTGSM 300 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114 +GL+ Y+++IANRR IG++P+++ NP PWM + K +N ET + Sbjct: 301 IGLSEKLLCNYVEWIANRRMKAIGIKPIYEIPANSNPLPWMDHWLKSKGVQNAPQETEIE 360 Query: 115 EYQQGA 120 Y G Sbjct: 361 SYIVGG 366 >gi|326781924|ref|YP_004322326.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM2] gi|310003114|gb|ADO97512.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM2] Length = 397 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 6/108 (5%) Query: 2 RDESLHLNFGIDVINQ-IKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 RDE+ HL +++N+ + ++P + KE ++ + A E +A G Sbjct: 257 RDENQHLAITQNILNKWAQGDDPEMKQIMKEEEEWTYKAFDNAVNEEKRWADYLFKDGSM 316 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLK 103 +GLN +QY++++ANRR IGL+P + + NP PW I K Sbjct: 317 IGLNDKLLQQYVEWVANRRLKAIGLKPQYDIAASANPLPWTQHWISSK 364 >gi|117624429|ref|YP_853342.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli APEC O1] gi|237704711|ref|ZP_04535192.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp. 3_2_53FAA] gi|115513553|gb|ABJ01628.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli APEC O1] gi|226901077|gb|EEH87336.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp. 3_2_53FAA] gi|323952030|gb|EGB47904.1| ribonucleotide reductase [Escherichia coli H252] gi|323956004|gb|EGB51757.1| ribonucleotide reductase [Escherichia coli H263] Length = 420 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 281 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 340 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 341 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 381 >gi|170682190|ref|YP_001744431.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli SMS-3-5] gi|170519908|gb|ACB18086.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli SMS-3-5] gi|315285847|gb|EFU45287.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 110-3] gi|315298059|gb|EFU57328.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 16-3] Length = 393 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 254 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 313 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 314 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 354 >gi|300936793|ref|ZP_07151685.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 21-1] gi|300458078|gb|EFK21571.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 21-1] Length = 405 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 266 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 325 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 326 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 366 >gi|26248623|ref|NP_754663.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli CFT073] gi|74312755|ref|YP_311174.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sonnei Ss046] gi|91211528|ref|YP_541514.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli UTI89] gi|110642443|ref|YP_670173.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli 536] gi|157157492|ref|YP_001463584.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli E24377A] gi|161485800|ref|NP_708125.3| ribonucleotide-diphosphate reductase subunit beta [Shigella flexneri 2a str. 301] gi|161486465|ref|NP_837840.2| ribonucleotide-diphosphate reductase subunit beta [Shigella flexneri 2a str. 2457T] gi|191166513|ref|ZP_03028343.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli B7A] gi|191170278|ref|ZP_03031832.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli F11] gi|194433322|ref|ZP_03065602.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella dysenteriae 1012] gi|209919687|ref|YP_002293771.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli SE11] gi|215487452|ref|YP_002329883.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O127:H6 str. E2348/69] gi|218554798|ref|YP_002387711.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli IAI1] gi|218559152|ref|YP_002392065.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli S88] gi|218695841|ref|YP_002403508.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli 55989] gi|218700706|ref|YP_002408335.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli IAI39] gi|227887293|ref|ZP_04005098.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli 83972] gi|253772842|ref|YP_003035673.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162246|ref|YP_003045354.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli B str. REL606] gi|256017603|ref|ZP_05431468.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9] gi|260844831|ref|YP_003222609.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia coli O103:H2 str. 12009] gi|260856285|ref|YP_003230176.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia coli O26:H11 str. 11368] gi|260868965|ref|YP_003235367.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia coli O111:H- str. 11128] gi|293446578|ref|ZP_06663000.1| ribonucleoside-diphosphate reductase [Escherichia coli B088] gi|300818165|ref|ZP_07098377.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 107-1] gi|300822109|ref|ZP_07102251.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 119-7] gi|300981251|ref|ZP_07175428.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 200-1] gi|300983269|ref|ZP_07176508.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 45-1] gi|301048988|ref|ZP_07195975.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 185-1] gi|306814652|ref|ZP_07448814.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli NC101] gi|307311198|ref|ZP_07590842.1| ribonucleotide reductase [Escherichia coli W] gi|309793115|ref|ZP_07687543.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 145-7] gi|331647890|ref|ZP_08348982.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli M605] gi|331668939|ref|ZP_08369787.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli TA271] gi|331678186|ref|ZP_08378861.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli H591] gi|26109028|gb|AAN81231.1|AE016763_190 Ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli CFT073] gi|73856232|gb|AAZ88939.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella sonnei Ss046] gi|91073102|gb|ABE07983.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli UTI89] gi|110344035|gb|ABG70272.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli 536] gi|157079522|gb|ABV19230.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli E24377A] gi|190903473|gb|EDV63192.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli B7A] gi|190909794|gb|EDV69379.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli F11] gi|194418416|gb|EDX34505.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella dysenteriae 1012] gi|209912946|dbj|BAG78020.1| ribonucleoside diphosphate reductase beta subunit [Escherichia coli SE11] gi|215265524|emb|CAS09927.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Escherichia coli O127:H6 str. E2348/69] gi|218352573|emb|CAU98352.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Escherichia coli 55989] gi|218361566|emb|CAQ99157.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Escherichia coli IAI1] gi|218365921|emb|CAR03663.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Escherichia coli S88] gi|218370692|emb|CAR18503.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Escherichia coli IAI39] gi|222033996|emb|CAP76737.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia coli LF82] gi|227835643|gb|EEJ46109.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli 83972] gi|242377869|emb|CAQ32637.1| nrdB, subunit of B2 protein and GDP reductase [multifunctional] [Escherichia coli BL21(DE3)] gi|253323886|gb|ACT28488.1| ribonucleotide reductase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974147|gb|ACT39818.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli B str. REL606] gi|253978314|gb|ACT43984.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli BL21(DE3)] gi|257754934|dbj|BAI26436.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia coli O26:H11 str. 11368] gi|257759978|dbj|BAI31475.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia coli O103:H2 str. 12009] gi|257765321|dbj|BAI36816.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia coli O111:H- str. 11128] gi|281179326|dbj|BAI55656.1| ribonucleoside diphosphate reductase beta subunit [Escherichia coli SE15] gi|291323408|gb|EFE62836.1| ribonucleoside-diphosphate reductase [Escherichia coli B088] gi|294490302|gb|ADE89058.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli IHE3034] gi|300299180|gb|EFJ55565.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 185-1] gi|300307615|gb|EFJ62135.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 200-1] gi|300408603|gb|EFJ92141.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 45-1] gi|300525239|gb|EFK46308.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 119-7] gi|300529309|gb|EFK50371.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 107-1] gi|305852046|gb|EFM52498.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli NC101] gi|306908704|gb|EFN39201.1| ribonucleotide reductase [Escherichia coli W] gi|307554301|gb|ADN47076.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like protein [Escherichia coli ABU 83972] gi|308123401|gb|EFO60663.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 145-7] gi|312946856|gb|ADR27683.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O83:H1 str. NRG 857C] gi|313651060|gb|EFS15459.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella flexneri 2a str. 2457T] gi|315061535|gb|ADT75862.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Escherichia coli W] gi|315292180|gb|EFU51532.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 153-1] gi|320178793|gb|EFW53756.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii ATCC 9905] gi|320196104|gb|EFW70728.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli WV_060327] gi|320199830|gb|EFW74419.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli EC4100B] gi|323156512|gb|EFZ42666.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia coli EPECa14] gi|323161696|gb|EFZ47579.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia coli E128010] gi|323168602|gb|EFZ54282.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella sonnei 53G] gi|323171914|gb|EFZ57558.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia coli LT-68] gi|323176838|gb|EFZ62428.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia coli 1180] gi|323184146|gb|EFZ69523.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia coli 1357] gi|323188037|gb|EFZ73332.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia coli RN587/1] gi|323377884|gb|ADX50152.1| Ribonucleoside-diphosphate reductase [Escherichia coli KO11] gi|324006608|gb|EGB75827.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 57-2] gi|324013118|gb|EGB82337.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 60-1] gi|324117882|gb|EGC11781.1| ribonucleotide reductase [Escherichia coli E1167] gi|325496725|gb|EGC94584.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia fergusonii ECD227] gi|330912066|gb|EGH40576.1| ribonucleotide reductase of class 1a (aerobic), beta subunit [Escherichia coli AA86] gi|331043614|gb|EGI15752.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli M605] gi|331064133|gb|EGI36044.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli TA271] gi|331074646|gb|EGI45966.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli H591] gi|332096162|gb|EGJ01165.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella dysenteriae 155-74] gi|332754883|gb|EGJ85248.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella flexneri 4343-70] gi|332755286|gb|EGJ85650.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella flexneri K-671] gi|332756386|gb|EGJ86737.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella flexneri 2747-71] gi|332766056|gb|EGJ96266.1| nrdB [Shigella flexneri 2930-71] gi|333001382|gb|EGK20950.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella flexneri VA-6] gi|333002603|gb|EGK22163.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella flexneri K-272] gi|333016476|gb|EGK35807.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella flexneri K-304] gi|333016745|gb|EGK36073.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella flexneri K-227] Length = 376 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 >gi|320175005|gb|EFW50120.1| ribonucleotide-diphosphate reductase subunit beta [Shigella dysenteriae CDC 74-1112] Length = 376 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 >gi|300897697|ref|ZP_07116095.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 198-1] gi|301022393|ref|ZP_07186277.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 69-1] gi|331683911|ref|ZP_08384507.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli H299] gi|300358575|gb|EFJ74445.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 198-1] gi|300397543|gb|EFJ81081.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 69-1] gi|323967677|gb|EGB63089.1| ribonucleotide reductase [Escherichia coli M863] gi|331078863|gb|EGI50065.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli H299] Length = 393 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 254 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 313 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 314 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 354 >gi|161617990|ref|YP_001595470.1| ribonucleotide reductase beta subunit [Enterobacteria phage phiEcoM-GJ1] gi|150416409|gb|ABR68787.1| ribonucleotide reductase beta subunit [Enterobacteria phage phiEcoM-GJ1] Length = 372 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 14/128 (10%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + E +Q+ + + +A E +A G Sbjct: 233 RDEALHLTGTQHMLNLLASGKDDPEMGEIAAECRQECQKLFEDAAQQEKDWADYLFKDGS 292 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-----SEVIDLKKEKNFFET 111 +GLN Y+++I N R +GL+ FK NP PW+ S+ + + + ET Sbjct: 293 MIGLNKQILCGYVEYITNIRMQAVGLDAPFKGATNPIPWINAWLNSDAVQVAPQ----ET 348 Query: 112 RVTEYQQG 119 ++ Y G Sbjct: 349 EISSYLVG 356 >gi|110806205|ref|YP_689725.1| ribonucleotide-diphosphate reductase subunit beta [Shigella flexneri 5 str. 8401] gi|110615753|gb|ABF04420.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella flexneri 5 str. 8401] gi|281601680|gb|ADA74664.1| putative ribonucleotide reductase, beta subunit [Shigella flexneri 2002017] Length = 453 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 314 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 373 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 374 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 414 >gi|61680624|pdb|1YFD|A Chain A, Crystal Structure Of The Y122h Mutant Of Ribonucleotide Reductase R2 Protein From E. Coli gi|61680625|pdb|1YFD|B Chain B, Crystal Structure Of The Y122h Mutant Of Ribonucleotide Reductase R2 Protein From E. Coli Length = 375 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 336 >gi|1942079|pdb|1XIK|A Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain gi|1942080|pdb|1XIK|B Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain gi|15825694|pdb|1JPR|A Chain A, Mn Substituted Ribonucleotide Reductase R2 From E. Coli Oxidized By Nitric Oxide gi|15825695|pdb|1JPR|B Chain B, Mn Substituted Ribonucleotide Reductase R2 From E. Coli Oxidized By Nitric Oxide gi|15826771|pdb|1JQC|A Chain A, Mn Substituted Ribonucleotide Reductase R2 From E. Coli Oxidized By Hydrogen Peroxide And Hydroxylamine gi|15826772|pdb|1JQC|B Chain B, Mn Substituted Ribonucleotide Reductase R2 From E. Coli Oxidized By Hydrogen Peroxide And Hydroxylamine gi|29726528|pdb|1MXR|A Chain A, High Resolution Structure Of Ribonucleotide Reductase R2 From E. Coli In Its Oxidised (Met) Form gi|29726529|pdb|1MXR|B Chain B, High Resolution Structure Of Ribonucleotide Reductase R2 From E. Coli In Its Oxidised (Met) Form Length = 375 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 336 >gi|189403970|ref|ZP_02786340.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4501] gi|217327202|ref|ZP_03443285.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. TW14588] gi|301026864|ref|ZP_07190263.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 196-1] gi|301647674|ref|ZP_07247468.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 146-1] gi|189368305|gb|EDU86721.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4501] gi|217319569|gb|EEC27994.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. TW14588] gi|260448673|gb|ACX39095.1| Ribonucleoside-diphosphate reductase [Escherichia coli DH1] gi|299879524|gb|EFI87735.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 196-1] gi|301074204|gb|EFK89010.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 146-1] gi|326339582|gb|EGD63393.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 str. 1125] Length = 393 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 254 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 313 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 314 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 354 >gi|304445703|pdb|2XOF|A Chain A, Ribonucleotide Reductase Y122no2y Modified R2 Subunit Of E. Coli gi|304445704|pdb|2XOF|B Chain B, Ribonucleotide Reductase Y122no2y Modified R2 Subunit Of E. Coli Length = 375 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 336 >gi|40889712|pdb|1RSR|A Chain A, Azide Complex Of The Diferrous F208a Mutant R2 Subunit Of Ribonucleotide Reductase gi|40889713|pdb|1RSR|B Chain B, Azide Complex Of The Diferrous F208a Mutant R2 Subunit Of Ribonucleotide Reductase Length = 375 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 336 >gi|194427189|ref|ZP_03059740.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli B171] gi|194436109|ref|ZP_03068211.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli 101-1] gi|300918603|ref|ZP_07135191.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 115-1] gi|300931418|ref|ZP_07146747.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 187-1] gi|301303305|ref|ZP_07209430.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 124-1] gi|194414810|gb|EDX31081.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli B171] gi|194424837|gb|EDX40822.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli 101-1] gi|300414255|gb|EFJ97565.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 115-1] gi|300460788|gb|EFK24281.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 187-1] gi|300841479|gb|EFK69239.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 124-1] gi|323961541|gb|EGB57149.1| ribonucleotide reductase [Escherichia coli H489] gi|323973062|gb|EGB68256.1| ribonucleotide reductase [Escherichia coli TA007] Length = 393 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 254 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 313 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 314 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 354 >gi|332278613|ref|ZP_08391026.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9] gi|332100965|gb|EGJ04311.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9] Length = 420 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 281 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 340 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 341 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 381 >gi|331653669|ref|ZP_08354670.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli M718] gi|331048518|gb|EGI20594.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli M718] Length = 449 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 310 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 369 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 370 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 410 >gi|326783480|ref|YP_004324017.1| ribonucleotide reductase A subunit [Synechococcus phage Syn19] gi|310004983|gb|ADO99373.1| ribonucleotide reductase A subunit [Synechococcus phage Syn19] Length = 388 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVINQ-IKIENPH--LWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 RDES HL +++ + + ++P L +E Q M E A+A+ G Sbjct: 248 RDESQHLVITQNILRKWSEGDDPEMKLIAQEEQSYVTEMFKRTVEEEKAWANYLFRDGSL 307 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114 +GLN Y+++IANRR +G++P++ NP PW ++ K ++N ET + Sbjct: 308 IGLNDRLLYNYVEWIANRRMKAVGIKPIYDIPAKNNPLPWTEHWLNSKGQQNAPQETEIE 367 Query: 115 EYQQGA 120 Y G Sbjct: 368 SYVVGG 373 >gi|331663742|ref|ZP_08364652.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli TA143] gi|323977567|gb|EGB72653.1| ribonucleotide reductase [Escherichia coli TW10509] gi|331059541|gb|EGI31518.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli TA143] Length = 389 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 350 >gi|54309624|ref|YP_130644.1| ribonucleotide-diphosphate reductase subunit beta [Photobacterium profundum SS9] gi|46914062|emb|CAG20842.1| putative ribonucleoside-diphosphate reductase,beta subunit [Photobacterium profundum SS9] Length = 377 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+ + EA E +A G Sbjct: 237 RDEALHLTGTQHILNLLRGRHDDPEMADIAQECQQECFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GLE + +NP PW++ Sbjct: 297 MIGLNKEILCQYVEYITNLRMKAVGLEQAYPGANQNPIPWIN 338 >gi|324112772|gb|EGC06748.1| ribonucleotide reductase [Escherichia fergusonii B253] Length = 389 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 350 >gi|193068232|ref|ZP_03049196.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli E110019] gi|300903617|ref|ZP_07121535.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 84-1] gi|300926340|ref|ZP_07142140.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 182-1] gi|301328725|ref|ZP_07221778.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 78-1] gi|30041924|gb|AAP17650.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella flexneri 2a str. 2457T] gi|56383622|gb|AAN43832.2| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella flexneri 2a str. 301] gi|192958511|gb|EDV88950.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli E110019] gi|300404353|gb|EFJ87891.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 84-1] gi|300417617|gb|EFK00928.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 182-1] gi|300844873|gb|EFK72633.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 78-1] gi|315255170|gb|EFU35138.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 85-1] Length = 389 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 350 >gi|331642864|ref|ZP_08343999.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli H736] gi|331039662|gb|EGI11882.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli H736] Length = 449 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 310 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 369 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 370 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 410 >gi|329119976|ref|ZP_08248648.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria bacilliformis ATCC BAA-1200] gi|327463889|gb|EGF10203.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria bacilliformis ATCC BAA-1200] Length = 384 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E Q + + +A E +A G Sbjct: 244 RDEALHLTSTQHMLNLMRAGADDPEMAEIAVELQDECFKLFKKAAEQEKEWAAYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMS 97 +GLN QY+++I N R +GL+P F + +NP PW++ Sbjct: 304 MIGLNKDILCQYVEYITNHRMIAVGLDPAFPASNQNPIPWIN 345 >gi|331658316|ref|ZP_08359278.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli TA206] gi|307626227|gb|ADN70531.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli UM146] gi|331056564|gb|EGI28573.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli TA206] Length = 389 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 350 >gi|291283479|ref|YP_003500297.1| Ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Escherichia coli O55:H7 str. CB9615] gi|290763352|gb|ADD57313.1| Ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Escherichia coli O55:H7 str. CB9615] Length = 389 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 350 >gi|170019452|ref|YP_001724406.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli ATCC 8739] gi|187775748|ref|ZP_02798054.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4196] gi|188024880|ref|ZP_02774660.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4113] gi|189010171|ref|ZP_02805091.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4076] gi|189402101|ref|ZP_02779989.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4401] gi|189403050|ref|ZP_02792862.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4486] gi|189404930|ref|ZP_02812148.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC869] gi|189405663|ref|ZP_02823406.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC508] gi|208806716|ref|ZP_03249053.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4206] gi|208812585|ref|ZP_03253914.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4045] gi|208820390|ref|ZP_03260710.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4042] gi|209398142|ref|YP_002271641.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4115] gi|293415528|ref|ZP_06658171.1| ribonucleoside-diphosphate reductase [Escherichia coli B185] gi|300948933|ref|ZP_07162994.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 116-1] gi|300958921|ref|ZP_07171024.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 175-1] gi|307138893|ref|ZP_07498249.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli H736] gi|169754380|gb|ACA77079.1| Ribonucleoside-diphosphate reductase [Escherichia coli ATCC 8739] gi|187771218|gb|EDU35062.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4196] gi|188016038|gb|EDU54160.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4113] gi|189002108|gb|EDU71094.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4076] gi|189357709|gb|EDU76128.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4401] gi|189362845|gb|EDU81264.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4486] gi|189372811|gb|EDU91227.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC869] gi|189378868|gb|EDU97284.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC508] gi|208726517|gb|EDZ76118.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4206] gi|208733862|gb|EDZ82549.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4045] gi|208740513|gb|EDZ88195.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4042] gi|209159542|gb|ACI36975.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4115] gi|291433176|gb|EFF06155.1| ribonucleoside-diphosphate reductase [Escherichia coli B185] gi|300314424|gb|EFJ64208.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 175-1] gi|300451587|gb|EFK15207.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 116-1] gi|315136867|dbj|BAJ44026.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli DH1] gi|320192144|gb|EFW66789.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 str. EC1212] gi|320641061|gb|EFX10540.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 str. G5101] gi|320646450|gb|EFX15369.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H- str. 493-89] gi|320651547|gb|EFX19927.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H- str. H 2687] gi|320657299|gb|EFX25101.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320667818|gb|EFX34726.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 str. LSU-61] gi|323936632|gb|EGB32918.1| ribonucleotide reductase [Escherichia coli E1520] gi|323941071|gb|EGB37258.1| ribonucleotide reductase [Escherichia coli E482] gi|326344044|gb|EGD67805.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 str. 1044] Length = 389 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 350 >gi|3891570|pdb|2AV8|A Chain A, Y122f Mutant Of Ribonucleotide Reductase From Escherichia Coli gi|3891571|pdb|2AV8|B Chain B, Y122f Mutant Of Ribonucleotide Reductase From Escherichia Coli Length = 340 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 336 >gi|83754022|pdb|2ALX|A Chain A, Ribonucleotide Reductase R2 From Escherichia Coli In Space Group P6(1)22 Length = 340 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 >gi|3891582|pdb|1AV8|A Chain A, Ribonucleotide Reductase R2 Subunit From E. Coli gi|3891583|pdb|1AV8|B Chain B, Ribonucleotide Reductase R2 Subunit From E. Coli Length = 340 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 336 >gi|156975012|ref|YP_001445919.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio harveyi ATCC BAA-1116] gi|156526606|gb|ABU71692.1| hypothetical protein VIBHAR_02734 [Vibrio harveyi ATCC BAA-1116] Length = 377 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKI-ENPHLW---TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +IN ++ ++ L+ +E +Q+ + EA E +A G Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFLFMQIAEEEKQECFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GL + + T NP PW++ Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATSNPIPWIN 338 >gi|254230294|ref|ZP_04923683.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio sp. Ex25] gi|151937191|gb|EDN56060.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio sp. Ex25] Length = 242 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +IN ++ +E +Q + EA E +A G Sbjct: 102 RDEALHLNGTQHMINLLRNGQDDFTFMQIAEEAKQDCFDLFKEAAEQEKEWAEYLFKDGS 161 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GL + + T NP PW++ Sbjct: 162 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATTNPIPWIN 203 >gi|1941986|pdb|1PFR|A Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain gi|1941987|pdb|1PFR|B Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain Length = 340 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 336 >gi|312162814|ref|YP_003933799.1| ribonucleotide reductase subunit 2 [Saimiriine herpesvirus 1] gi|308096447|gb|ADO13787.1| ribonucleotide reductase subunit 2 [Saimiriine herpesvirus 1] Length = 338 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 13/121 (10%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N P K + + EA +EI + H P+ L+ Sbjct: 217 RDEAIHTTASCYIYNNYLTGYP----KPSTDRIHYLFREAVEIEIRFIHSQAPRDSHILD 272 Query: 62 APSCEQ---YMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL---KKEKNFFETRVTE 115 A + Q Y+ F A+R I L PLF + P P S + L +K NFFE+R T Sbjct: 273 AAALRQIDNYVHFCADRLLKMIKLPPLF---DAPAPDCSFPLALMFTEKHTNFFESRSTA 329 Query: 116 Y 116 Y Sbjct: 330 Y 330 >gi|51595597|ref|YP_069788.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pseudotuberculosis IP 32953] gi|108806924|ref|YP_650840.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis Antiqua] gi|108812924|ref|YP_648691.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis Nepal516] gi|145599749|ref|YP_001163825.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis Pestoides F] gi|149366796|ref|ZP_01888830.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis CA88-4125] gi|153950490|ref|YP_001401734.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pseudotuberculosis IP 31758] gi|161484771|ref|NP_670275.2| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis KIM 10] gi|161511422|ref|NP_992302.2| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis biovar Microtus str. 91001] gi|162418296|ref|YP_001605847.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis Angola] gi|165924721|ref|ZP_02220553.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165938305|ref|ZP_02226863.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Orientalis str. IP275] gi|166009974|ref|ZP_02230872.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166211802|ref|ZP_02237837.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167400353|ref|ZP_02305866.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419574|ref|ZP_02311327.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424117|ref|ZP_02315870.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470792|ref|ZP_02335496.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis FV-1] gi|170025073|ref|YP_001721578.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pseudotuberculosis YPIII] gi|186894660|ref|YP_001871772.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pseudotuberculosis PB1/+] gi|218928372|ref|YP_002346247.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis CO92] gi|229841157|ref|ZP_04461316.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843262|ref|ZP_04463408.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis biovar Orientalis str. India 195] gi|229894122|ref|ZP_04509308.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis Pestoides A] gi|229903354|ref|ZP_04518467.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis Nepal516] gi|270487164|ref|ZP_06204238.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis KIM D27] gi|294503227|ref|YP_003567289.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis Z176003] gi|51588879|emb|CAH20493.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pseudotuberculosis IP 32953] gi|108776572|gb|ABG19091.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Yersinia pestis Nepal516] gi|108778837|gb|ABG12895.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Yersinia pestis Antiqua] gi|115346983|emb|CAL19874.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis CO92] gi|145211445|gb|ABP40852.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Yersinia pestis Pestoides F] gi|149291170|gb|EDM41245.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis CA88-4125] gi|152961985|gb|ABS49446.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pseudotuberculosis IP 31758] gi|162351111|gb|ABX85059.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis Angola] gi|165913683|gb|EDR32302.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Orientalis str. IP275] gi|165923781|gb|EDR40913.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165991370|gb|EDR43671.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166207573|gb|EDR52053.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|166962315|gb|EDR58336.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050302|gb|EDR61710.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056966|gb|EDR66729.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751607|gb|ACA69125.1| Ribonucleoside-diphosphate reductase [Yersinia pseudotuberculosis YPIII] gi|186697686|gb|ACC88315.1| ribonucleotide reductase [Yersinia pseudotuberculosis PB1/+] gi|229679124|gb|EEO75227.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis Nepal516] gi|229689609|gb|EEO81670.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis biovar Orientalis str. India 195] gi|229697523|gb|EEO87570.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis biovar Orientalis str. PEXU2] gi|229704007|gb|EEO91020.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis Pestoides A] gi|262361266|gb|ACY57987.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis D106004] gi|262365197|gb|ACY61754.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis D182038] gi|270335668|gb|EFA46445.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis KIM D27] gi|294353686|gb|ADE64027.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis Z176003] gi|320015945|gb|ADV99516.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 376 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N +++ ++P + +E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHILNLMRLGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F NP PW++ Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGIPFSTRTNPIPWIN 337 >gi|324020907|gb|EGB90126.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 117-3] Length = 420 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 281 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 340 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 341 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 381 >gi|288549884|ref|ZP_06390831.1| ribonucleoside-diphosphate reductase, beta subunit [Enterobacter cancerogenus ATCC 35316] gi|288317051|gb|EFC55989.1| ribonucleoside-diphosphate reductase, beta subunit [Enterobacter cancerogenus ATCC 35316] Length = 420 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 281 RDEALHLTGTQHMLNLLRSGTDDPEMAAIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 340 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 341 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 381 >gi|332290530|ref|YP_004421382.1| ribonucleotide-diphosphate reductase subunit beta [Gallibacterium anatis UMN179] gi|330433426|gb|AEC18485.1| ribonucleotide-diphosphate reductase subunit beta [Gallibacterium anatis UMN179] Length = 376 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E QQ++ + A E +A+ G Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECQQEAYDLFVAAAEQEKEWANYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFTTRSNPIPWIN 337 >gi|21959884|gb|AAM86526.1|AE013899_3 ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Yersinia pestis KIM 10] gi|45435621|gb|AAS61179.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis biovar Microtus str. 91001] Length = 391 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N +++ ++P + +E QQ+ + A E +A G Sbjct: 252 RDEALHLTGTQHILNLMRLGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 311 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F NP PW++ Sbjct: 312 MIGLNKEILCQYVEYITNIRMQAVGLGIPFSTRTNPIPWIN 352 >gi|325919223|ref|ZP_08181270.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC 19865] gi|325923021|ref|ZP_08184721.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC 19865] gi|325546491|gb|EGD17645.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC 19865] gi|325550297|gb|EGD21104.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC 19865] Length = 347 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I EN L + A LE + E + G G++ Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWTAEVL-DGIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++ Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337 >gi|290473788|ref|YP_003466662.1| ribonucleoside-diphosphate reductase 1 subunit beta [Xenorhabdus bovienii SS-2004] gi|289173095|emb|CBJ79868.1| ribonucleoside-diphosphate reductase 1, beta subunit [Xenorhabdus bovienii SS-2004] Length = 376 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIARECEQQCYDLFVQAAEQEKEWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLKLPFEARSNPIPWIN 337 >gi|71065825|ref|YP_264552.1| ribonucleotide-diphosphate reductase subunit beta [Psychrobacter arcticus 273-4] gi|71038810|gb|AAZ19118.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Psychrobacter arcticus 273-4] Length = 377 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++I ++P + KE ++S + +A E +A G Sbjct: 237 RDEALHLTGTQHILNLMRIGRDDPEMVDIAKECYEESIEIFRKAAEQEKEWAGYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GL F K NP PW++ Sbjct: 297 MIGLNKDILCQYIEYITNLRMEAVGLPVAFPKSKSNPIPWIN 338 >gi|311278798|ref|YP_003941029.1| Ribonucleoside-diphosphate reductase [Enterobacter cloacae SCF1] gi|308747993|gb|ADO47745.1| Ribonucleoside-diphosphate reductase [Enterobacter cloacae SCF1] Length = 376 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 >gi|21233407|ref|NP_639324.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|21115247|gb|AAM43206.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 347 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I EN L + A LE + E + G G++ Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWTAEVL-DGIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++ Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337 >gi|157879968|pdb|1RNR|A Chain A, Autocatalytic Generation Of Dopa In The Engineered Protein R2 F208y From Escherichia Coli Ribonucleotide Reductase And Crystal Structure Of The Dopa-208 Protein gi|157879969|pdb|1RNR|B Chain B, Autocatalytic Generation Of Dopa In The Engineered Protein R2 F208y From Escherichia Coli Ribonucleotide Reductase And Crystal Structure Of The Dopa-208 Protein Length = 375 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F NP PW++ Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWIN 336 >gi|66770372|ref|YP_245134.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas campestris pv. campestris str. 8004] gi|188993572|ref|YP_001905582.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas campestris pv. campestris str. B100] gi|66575704|gb|AAY51114.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas campestris pv. campestris str. 8004] gi|167735332|emb|CAP53546.1| Ribonucleoside-diphosphate reductase beta chain [Xanthomonas campestris pv. campestris] Length = 347 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I EN L + A LE + E + G G++ Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWTAEVL-DGIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++ Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337 >gi|215275538|sp|P0C8I0|RIR2_ASFK5 RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit Length = 327 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 11/120 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE---IAYAHETMPKGFV 58 RDE +H +F +I+ P ++ +L EA L I+YA + Sbjct: 196 RDEGMHCSFACFLISNYLNNIPE------EKIIHKILKEAVELVDEFISYAFDKARGSVP 249 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117 G + QY+++ + C + + ++K ENPFP M++ + EK NFFE R T+YQ Sbjct: 250 GFSKEMLFQYIRYFTDNLCFMLQCKSIYK-VENPFPQMTKFFLNEVEKTNFFELRPTQYQ 308 >gi|153000811|ref|YP_001366492.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella baltica OS185] gi|160875520|ref|YP_001554836.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella baltica OS195] gi|151365429|gb|ABS08429.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS185] gi|160861042|gb|ABX49576.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS195] Length = 386 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 5/100 (5%) Query: 2 RDESLHLNFG--IDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN I I Q ++P + E QQ++ + +A E +A G Sbjct: 247 RDEALHLNSTQHILSIMQGGKDDPEMGEIAAECQQEAFDLFFKAAEQEKEWAKYLFKDGS 306 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96 +GLN QY++FI N+R + L + NP PWM Sbjct: 307 MIGLNEQILCQYVEFITNQRMKSVNLPQPYPEITNPLPWM 346 >gi|42543283|pdb|1PIY|A Chain A, Ribonucleotide Reductase R2 Soaked With Ferrous Ion At Neutral Ph gi|42543284|pdb|1PIY|B Chain B, Ribonucleotide Reductase R2 Soaked With Ferrous Ion At Neutral Ph gi|42543506|pdb|1R65|A Chain A, Crystal Structure Of Ferrous Soaked Ribonucleotide Reductase R2 Subunit (Wildtype) At Ph 5 From E. Coli gi|42543507|pdb|1R65|B Chain B, Crystal Structure Of Ferrous Soaked Ribonucleotide Reductase R2 Subunit (Wildtype) At Ph 5 From E. Coli Length = 375 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F NP PW++ Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWIN 336 >gi|295098106|emb|CBK87196.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 420 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 281 RDEALHLTGTQHMLNLLRSGADDPEMAAIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 340 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 341 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 381 >gi|325914792|ref|ZP_08177129.1| ribonucleotide reductase, beta subunit [Xanthomonas vesicatoria ATCC 35937] gi|325538985|gb|EGD10644.1| ribonucleotide reductase, beta subunit [Xanthomonas vesicatoria ATCC 35937] Length = 349 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I EN L + A LE + E + G G++ Sbjct: 221 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWTAEVL-DGIDGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++ Sbjct: 280 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 339 >gi|217973230|ref|YP_002357981.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella baltica OS223] gi|304408853|ref|ZP_07390474.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS183] gi|307302856|ref|ZP_07582611.1| Ribonucleoside-diphosphate reductase [Shewanella baltica BA175] gi|217498365|gb|ACK46558.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS223] gi|304352674|gb|EFM17071.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS183] gi|306913216|gb|EFN43638.1| Ribonucleoside-diphosphate reductase [Shewanella baltica BA175] gi|315267707|gb|ADT94560.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS678] Length = 376 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 5/100 (5%) Query: 2 RDESLHLNFG--IDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN I I Q ++P + E QQ++ + +A E +A G Sbjct: 237 RDEALHLNSTQHILSIMQGGKDDPEMGEIAAECQQEAFDLFFKAAEQEKEWAKYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96 +GLN QY++FI N+R + L + NP PWM Sbjct: 297 MIGLNEQILCQYVEFITNQRMKSVNLPQPYPEITNPLPWM 336 >gi|91227184|ref|ZP_01261643.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio alginolyticus 12G01] gi|262393879|ref|YP_003285733.1| ribonucleotide reductase of class Ia (aerobic) subunit beta [Vibrio sp. Ex25] gi|269967067|ref|ZP_06181135.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio alginolyticus 40B] gi|91188712|gb|EAS75000.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio alginolyticus 12G01] gi|262337473|gb|ACY51268.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio sp. Ex25] gi|269828326|gb|EEZ82592.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio alginolyticus 40B] Length = 377 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +IN ++ +E +Q + EA E +A G Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFTFMQIAEEAKQDCFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GL + + T NP PW++ Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATTNPIPWIN 338 >gi|494379|pdb|1MRR|A Chain A, Substitution Of Manganese For Iron In Ribonucleotide Reductase From Escherichia Coli. Spectroscopic And Crystallographic Characterization gi|494380|pdb|1MRR|B Chain B, Substitution Of Manganese For Iron In Ribonucleotide Reductase From Escherichia Coli. Spectroscopic And Crystallographic Characterization gi|494553|pdb|1RIB|A Chain A, Structure And Function Of The Escherichia Coli Ribonucleotide Reductase Protein R2 gi|494554|pdb|1RIB|B Chain B, Structure And Function Of The Escherichia Coli Ribonucleotide Reductase Protein R2 Length = 375 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F NP PW++ Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWIN 336 >gi|33358114|pdb|1PIM|A Chain A, Dithionite Reduced E. Coli Ribonucleotide Reductase R2 Subunit, D84e Mutant gi|33358115|pdb|1PIM|B Chain B, Dithionite Reduced E. Coli Ribonucleotide Reductase R2 Subunit, D84e Mutant gi|33358116|pdb|1PIU|A Chain A, Oxidized Ribonucleotide Reductase R2-D84e Mutant Containing Oxo-Bridged Diferric Cluster gi|33358117|pdb|1PIU|B Chain B, Oxidized Ribonucleotide Reductase R2-D84e Mutant Containing Oxo-Bridged Diferric Cluster gi|42543285|pdb|1PIZ|A Chain A, Ribonucleotide Reductase R2 D84e Mutant Soaked With Ferrous Ions At Neutral Ph gi|42543286|pdb|1PIZ|B Chain B, Ribonucleotide Reductase R2 D84e Mutant Soaked With Ferrous Ions At Neutral Ph Length = 375 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F NP PW++ Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWIN 336 >gi|42543287|pdb|1PJ0|A Chain A, Ribonucleotide Reductase R2-D84eW48F MUTANT SOAKED WITH Ferrous Ions At Neutral Ph gi|42543288|pdb|1PJ0|B Chain B, Ribonucleotide Reductase R2-D84eW48F MUTANT SOAKED WITH Ferrous Ions At Neutral Ph gi|42543289|pdb|1PJ1|A Chain A, Ribonucleotide Reductase R2-D84eW48F SOAKED WITH FERROUS Ions At Ph 5 gi|42543290|pdb|1PJ1|B Chain B, Ribonucleotide Reductase R2-D84eW48F SOAKED WITH FERROUS Ions At Ph 5 Length = 375 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F NP PW++ Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWIN 336 >gi|113200701|ref|YP_717864.1| ribonucleotide reductase subunit B [Synechococcus phage syn9] gi|76574600|gb|ABA47165.1| ribonucleotide reductase subunit B [Synechococcus phage syn9] Length = 387 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVINQIK-IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 RDE+ HL +++N+ + ++P + KE + M E +A G Sbjct: 247 RDENQHLVITQNILNKWREGDDPEMAIIAKEEEVNVVDMFKRTVNEEKRWADYLFKDGSM 306 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114 +GLN Y+++IANRR IGL+P++ NP PW ++ K ++N ET + Sbjct: 307 IGLNDRLLHNYVEWIANRRMKAIGLKPIYDIPAKNNPLPWTEHWLNSKGQQNAPQETEIE 366 Query: 115 EYQQGA 120 Y G Sbjct: 367 SYVVGG 372 >gi|328474726|gb|EGF45531.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio parahaemolyticus 10329] Length = 377 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +IN ++ +E +Q + EA E +A G Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFSFMQIAEEAKQDCFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GL + + T NP PW++ Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATTNPIPWIN 338 >gi|42543295|pdb|1PM2|A Chain A, Crystal Structure Of Manganese Substituted R2-D84e (D84e Mutant Of The R2 Subunit Of E. Coli Ribonucleotide Reductase) gi|42543296|pdb|1PM2|B Chain B, Crystal Structure Of Manganese Substituted R2-D84e (D84e Mutant Of The R2 Subunit Of E. Coli Ribonucleotide Reductase) Length = 339 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F NP PW++ Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWIN 336 >gi|28898709|ref|NP_798314.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio parahaemolyticus RIMD 2210633] gi|153839553|ref|ZP_01992220.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio parahaemolyticus AQ3810] gi|260363692|ref|ZP_05776476.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio parahaemolyticus K5030] gi|260879741|ref|ZP_05892096.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio parahaemolyticus AN-5034] gi|260898785|ref|ZP_05907226.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio parahaemolyticus Peru-466] gi|260901598|ref|ZP_05909993.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio parahaemolyticus AQ4037] gi|28806927|dbj|BAC60198.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio parahaemolyticus RIMD 2210633] gi|149746934|gb|EDM57922.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio parahaemolyticus AQ3810] gi|308086689|gb|EFO36384.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio parahaemolyticus Peru-466] gi|308093260|gb|EFO42955.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio parahaemolyticus AN-5034] gi|308108691|gb|EFO46231.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio parahaemolyticus AQ4037] gi|308113401|gb|EFO50941.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio parahaemolyticus K5030] Length = 377 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +IN ++ +E +Q + EA E +A G Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFSFMQIAEEAKQDCFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GL + + T NP PW++ Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATTNPIPWIN 338 >gi|212635281|ref|YP_002311806.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella piezotolerans WP3] gi|212556765|gb|ACJ29219.1| Ribonucleoside-diphosphate reductase, beta subunit [Shewanella piezotolerans WP3] Length = 376 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 5/100 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN ++ + ++P + KE +Q + + +A E +A G Sbjct: 237 RDEALHLNSTQHILKIMHAGKDDPEMAEIAKECEQTAIDIFVKAAEQEKEWAKYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96 +GLN QY+++I N R + LE + NP PWM Sbjct: 297 MIGLNEQILCQYVEYITNERMKAVNLESPYAEQSNPLPWM 336 >gi|238797463|ref|ZP_04640962.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia mollaretii ATCC 43969] gi|238718734|gb|EEQ10551.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia mollaretii ATCC 43969] Length = 376 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ ++P + +E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHIINLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F NP PW++ Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGVPFNTRTNPIPWIN 337 >gi|262274472|ref|ZP_06052283.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Grimontia hollisae CIP 101886] gi|262221035|gb|EEY72349.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Grimontia hollisae CIP 101886] Length = 360 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + KE +Q + A E +A G Sbjct: 220 RDEALHLTSTQHMLNILRSGDDDPEMAEIAKECEQVCFDLFKNAAEQEKEWAEYLFKDGS 279 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL+P ++ +NP PW++ Sbjct: 280 MIGLNKDILCQYVEYITNLRMAAVGLKPAYQGANQNPIPWIN 321 >gi|262165506|ref|ZP_06033243.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio mimicus VM223] gi|262025222|gb|EEY43890.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio mimicus VM223] Length = 377 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ +E +Q+S + +A E +A G Sbjct: 237 RDEALHLTGTQHMINILRNGMDDFTFLQVAEECKQESFDLFKQAAEQEKEWASYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GLEP + NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAAVNNPIPWIN 338 >gi|238761950|ref|ZP_04622923.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia kristensenii ATCC 33638] gi|238699678|gb|EEP92422.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia kristensenii ATCC 33638] Length = 400 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ ++P + +E QQ+ + A E +A G Sbjct: 261 RDEALHLTGTQHIINLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 320 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F NP PW++ Sbjct: 321 MIGLNKEILCQYVEYITNIRMQAVGLGVPFNTRTNPIPWIN 361 >gi|262171721|ref|ZP_06039399.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio mimicus MB-451] gi|261892797|gb|EEY38783.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio mimicus MB-451] Length = 377 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ +E +Q+S + +A E +A G Sbjct: 237 RDEALHLTGTQHMINILRNGMDDFTFLQVAEECKQESFDLFKQAAEQEKEWASYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GLEP + NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAAVNNPIPWIN 338 >gi|238751211|ref|ZP_04612705.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia rohdei ATCC 43380] gi|238710485|gb|EEQ02709.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia rohdei ATCC 43380] Length = 399 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E QQ+ + A E +A G Sbjct: 260 RDEALHLTGTQHILNLMRSGEDDPEMAEIAVECQQQCYDLFVLAAEQEKEWAEYLFRDGS 319 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL FK NP PW++ Sbjct: 320 MIGLNKEILCQYVEYITNIRMQAVGLGTPFKTRTNPIPWIN 360 >gi|309379219|emb|CBX22176.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 384 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + +E Q++ + +A E +A G Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDPEMAEIAEELQEECFKLFKKAAEQEKEWAAYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL F+ +NP PW++ Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 345 >gi|221105497|ref|XP_002169241.1| PREDICTED: similar to ribonucleoside-diphosphate reductase small chain [Hydra magnipapillata] Length = 363 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 11/120 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 +DE +H FG + I ++ F++ M EA + ++ + + +G+N Sbjct: 236 KDEGMHTIFGCVIYTFI------IYRLSFEEICELM-KEAVEICKSFTKDAICVDMIGMN 288 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENP--FPWMSEVIDLKKEKNFFETRVTEYQQG 119 Y++++A+R +G E +F T+ P F +M + L K+ NFFE R TEYQ+ Sbjct: 289 VELMYNYIEYVADRLMVYLGYEKIF-MTKIPDQFQFMDTIGFLNKD-NFFERRATEYQKA 346 >gi|253989035|ref|YP_003040391.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211638141|emb|CAR66767.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotid reductase 1) (b2 protein) (r2 protein) [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780485|emb|CAQ83647.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotid reductase 1) (b2 protein) (r2 protein) [Photorhabdus asymbiotica] Length = 376 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E +Q+ + +A E +A +G Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIANECEQQCYDLFVQAAEQEKEWADYLFSEGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNRDILCQYVEYITNIRMQAVGLKLPFETRSNPIPWIN 337 >gi|126174279|ref|YP_001050428.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella baltica OS155] gi|125997484|gb|ABN61559.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Shewanella baltica OS155] Length = 376 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 5/100 (5%) Query: 2 RDESLHLNFG--IDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN I I Q ++P + E QQ++ + +A E +A G Sbjct: 237 RDEALHLNSTQHILSIMQGGKDDPEMGEIAAECQQEAFDLFFKAAEQEKEWAKYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96 +GLN QY++FI N+R + L + NP PWM Sbjct: 297 MIGLNEQILCQYVEFITNQRMKSVNLPQPYLEITNPLPWM 336 >gi|293401949|ref|ZP_06646089.1| ribonucleoside-diphosphate reductase, beta subunit [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304607|gb|EFE45856.1| ribonucleoside-diphosphate reductase, beta subunit [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 347 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +++ E P L+T ++ + ML EI + + GL Sbjct: 219 RDENTHLWLFRSMILELQKEEPQLFTPALVEEYKDMLRYGVEEEIRWGSYVIGNDIEGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117 +Y+ ++ N R +G L++ Y + P W+S + K +FFE R + Y Sbjct: 279 MQMVREYIYYLGNLRSTSLGFGTLYEGYEKEPASMEWVSMYANANLIKTDFFEARSSAYA 338 Query: 118 QGAEL 122 + + L Sbjct: 339 KSSAL 343 >gi|149911236|ref|ZP_01899859.1| ribonucleotide-diphosphate reductase beta subunit [Moritella sp. PE36] gi|149805690|gb|EDM65689.1| ribonucleotide-diphosphate reductase beta subunit [Moritella sp. PE36] Length = 376 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + + E Q+++ + +A E +A G Sbjct: 237 RDEALHLTSTQHILNLMADGKDDPEMQEISIECFQETQKIFTDAAQQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN Y+++I N R +GL F+ NP PW++ Sbjct: 297 MIGLNKDILSDYIEYITNTRMAAVGLPKAFEVKSNPLPWIN 337 >gi|258620211|ref|ZP_05715250.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus VM573] gi|258587569|gb|EEW12279.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus VM573] Length = 381 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ +E +Q+S + +A E +A G Sbjct: 241 RDEALHLTGTQHMINILRNGMDDFTFLQVAEECKQESFDLFKQAAEQEKEWASYLFKDGS 300 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GLEP + NP PW++ Sbjct: 301 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAAVNNPIPWIN 342 >gi|258624428|ref|ZP_05719375.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus VM603] gi|258583275|gb|EEW08077.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus VM603] Length = 381 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ +E +Q+S + +A E +A G Sbjct: 241 RDEALHLTGTQHMINILRNGMDDFTFLQVAEECKQESFDLFKQAAEQEKEWASYLFKDGS 300 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GLEP + NP PW++ Sbjct: 301 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAAVNNPIPWIN 342 >gi|284799957|ref|ZP_05985309.2| ribonucleoside-diphosphate reductase, beta subunit [Neisseria subflava NJ9703] gi|284796454|gb|EFC51801.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria subflava NJ9703] Length = 377 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E Q + + +A E +A G Sbjct: 237 RDEALHLTSTQHMLNLMRAGADDPEMAEIANELQDECFNLFKKAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL F+ T+NP PW++ Sbjct: 297 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWIN 338 >gi|172054963|ref|YP_001806290.1| ribonucleoside-diphosphate reductase subunit beta [Cyanothece sp. ATCC 51142] gi|171701244|gb|ACB54224.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp. ATCC 51142] Length = 347 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%) Query: 45 EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVID 101 EI + + +G++ S E Y +++AN R IG+ ++ ENP+ W Sbjct: 259 EIEWTNHIFDGQILGVSEASTEAYTKYLANLRLKAIGISAIYPEVENPYAHLDWADFKGI 318 Query: 102 LKKEKNFFETRVTEYQQGAELK 123 K + FFET VT Y Q +K Sbjct: 319 GKSKAAFFETEVTGYAQPTAVK 340 >gi|268591162|ref|ZP_06125383.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia rettgeri DSM 1131] gi|291313388|gb|EFE53841.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia rettgeri DSM 1131] Length = 378 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E +Q+ + +A E +A +G Sbjct: 239 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEQECYDLFVQAAEQEKEWADYLFSEGS 298 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 299 MIGLNKDILCQYVEYITNIRMQAVGLKLPFETRSNPIPWIN 339 >gi|238753722|ref|ZP_04615083.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia ruckeri ATCC 29473] gi|238707958|gb|EEQ00315.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia ruckeri ATCC 29473] Length = 376 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHILNLMRSGEDDPEMAEIAVECQQQCYDLFVLAAEQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL FK NP PW++ Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGTPFKTRTNPIPWIN 337 >gi|225075859|ref|ZP_03719058.1| hypothetical protein NEIFLAOT_00882 [Neisseria flavescens NRL30031/H210] gi|224952805|gb|EEG34014.1| hypothetical protein NEIFLAOT_00882 [Neisseria flavescens NRL30031/H210] Length = 388 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E Q + + +A E +A G Sbjct: 248 RDEALHLTSTQHMLNLMRAGADDPEMAEIANELQDECFNLFKKAAEQEKEWAAYLFKDGS 307 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL F+ T+NP PW++ Sbjct: 308 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWIN 349 >gi|117920413|ref|YP_869605.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp. ANA-3] gi|117612745|gb|ABK48199.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Shewanella sp. ANA-3] Length = 391 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 5/100 (5%) Query: 2 RDESLHLNFG--IDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN I I Q ++P + E QQ++ + +A E +A G Sbjct: 252 RDEALHLNSTQHILTIMQGGKDDPEMAEIAAECQQEAYNLFLKAAEQEKEWAKYLFKDGS 311 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96 +GLN QY+++I N+R + L + NP PWM Sbjct: 312 MIGLNEQILCQYVEYITNQRMKSVNLPLPYAELSNPLPWM 351 >gi|317164437|gb|ADV07978.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae TCDC-NG08107] Length = 377 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + E Q + + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL F+ +NP PW++ Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLSAGFEGANQNPIPWIN 338 >gi|121730673|ref|ZP_01682814.1| ATP-dependent Zn proteases [Vibrio cholerae V52] gi|121627739|gb|EAX60372.1| ATP-dependent Zn proteases [Vibrio cholerae V52] Length = 129 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%) Query: 27 TKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPL 85 +E +Q+S + EA E +A G +GLN QY+++I N R +GLEP Sbjct: 18 AEECKQESFDLFKEAAEQEKEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLEPA 77 Query: 86 F-KYTENPFPWMS 97 + T NP PW++ Sbjct: 78 YPAATNNPIPWIN 90 >gi|319638203|ref|ZP_07992966.1| ribonucleoside diphosphate reductase subunit I beta [Neisseria mucosa C102] gi|317400476|gb|EFV81134.1| ribonucleoside diphosphate reductase subunit I beta [Neisseria mucosa C102] Length = 384 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E Q + + +A E +A G Sbjct: 244 RDEALHLTSTQHMLNLMRAGADDPEMAEIANELQDECFNLFKKAAEQEKEWAAYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL F+ T+NP PW++ Sbjct: 304 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWIN 345 >gi|9629745|ref|NP_045237.1| ribonucleotide reductase subunit 2 [Equid herpesvirus 4] gi|2605963|gb|AAC59535.1| 20 [Equid herpesvirus 4] Length = 320 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 12/120 (10%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLH----EATLLEIAYAHETMPKGF 57 RDE++H N + N + F++ + T ++ EA +E + PK Sbjct: 202 RDEAIHTNASCCIYNN--------YLGGFEKPAPTRIYALFSEAVNIECEFLLSHAPKST 253 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 L+ + Y+++ A+R +IGL PLF + P + + ++K NFFE R T Y Sbjct: 254 HLLDIEAIICYVRYSADRLLGEIGLSPLFNAPKPPPSFPLAFMTVEKHTNFFERRSTAYS 313 >gi|311977695|ref|YP_003986815.1| ribonucleoside-diphosphate reductase small chain [Acanthamoeba polyphaga mimivirus] gi|77416594|sp|Q7T6Y9|RIR2_MIMIV RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|55664859|gb|AAQ09571.2| ribonucleotide reductase small subunit [Acanthamoeba polyphaga mimivirus] gi|308204332|gb|ADO18133.1| ribonucleoside-diphosphate reductase small chain [Acanthamoeba polyphaga mimivirus] Length = 417 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 2/70 (2%) Query: 50 HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 109 ++++P +G+N+ QY++++A+R +G F +NPF +M + ID+ + NFF Sbjct: 336 NDSLPCKLLGMNSELMSQYIKYVADRLLVDLGYRKKFN-VDNPFEYMKK-IDVFVKANFF 393 Query: 110 ETRVTEYQQG 119 E R Y Sbjct: 394 EKRNDAYSNA 403 >gi|51557509|ref|YP_068343.1| ribonucleotide reductase subunit 2 [Suid herpesvirus 1] gi|1710400|sp|P50645|RIR2_SUHVK RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|437737|emb|CAA50977.1| ribonucleotide reductase [Suid herpesvirus 1] gi|525265|emb|CAA56776.1| ribonucleotid reductase, small subunit [Suid herpesvirus 1] gi|40253968|tpg|DAA02163.1| TPA_exp: small subunit of ribonucleotide reductase [Suid herpesvirus 1] gi|1090510|prf||2019240B ribonucleotide reductase:SUBUNIT=small Length = 303 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 4/115 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + + N + P Q + EA +E + P+ + L+ Sbjct: 185 RDEAIHTSASCCIYNNYLGDAPRPDEARIHQ----LFAEAVEIECEFLRARAPRDSLLLD 240 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 P+ Y+++ A+R IG PLF + ++ +K NFFE R T Y Sbjct: 241 LPAIISYVRYSADRLLQAIGASPLFGAPAPAADFPMALMVAEKHTNFFERRSTNY 295 >gi|269963956|ref|ZP_06178265.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio harveyi 1DA3] gi|269831299|gb|EEZ85449.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio harveyi 1DA3] Length = 377 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +IN ++ +E +Q + EA E +A G Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFTFMQIAEEAKQDCFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GL + + T NP PW++ Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPMAYPEATSNPIPWIN 338 >gi|294625675|ref|ZP_06704297.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294664800|ref|ZP_06730124.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292600044|gb|EFF44159.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605431|gb|EFF48758.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 347 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I EN L + A LE + E + G G++ Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++ Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337 >gi|1710396|sp|P50644|RIR2_EHV4 RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|515833|emb|CAA53101.1| ribonucleoside-diphosphate reductase [Equid herpesvirus 4] Length = 320 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 12/120 (10%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLH----EATLLEIAYAHETMPKGF 57 RDE++H N + N + F++ + T ++ EA +E + PK Sbjct: 202 RDEAIHTNASCCIYNN--------YLGGFEKPAPTRIYALFSEAVNIECEFLLSHAPKSS 253 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 L+ + Y+++ A+R +IGL PLF + P + + ++K NFFE R T Y Sbjct: 254 HLLDIEAIICYVRYSADRLLGEIGLSPLFNAPKPPPSFPLAFMTVEKHTNFFERRSTAYS 313 >gi|289670858|ref|ZP_06491933.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 349 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I EN L + A LE + E + G G++ Sbjct: 221 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++ Sbjct: 280 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 339 >gi|261867684|ref|YP_003255606.1| ribonucleotide-diphosphate reductase subunit beta [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413016|gb|ACX82387.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter actinomycetemcomitans D11S-1] Length = 376 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q++ + A E +A G Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQEKDWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F+ NP PW++ Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWIN 337 >gi|156933156|ref|YP_001437072.1| ribonucleotide-diphosphate reductase subunit beta [Cronobacter sakazakii ATCC BAA-894] gi|156531410|gb|ABU76236.1| hypothetical protein ESA_00966 [Cronobacter sakazakii ATCC BAA-894] Length = 376 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGEDDPEMAAIAEECKQECYDLFVLAAQQEKEWAEYLFQGGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ FK NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFKTRSNPIPWIN 337 >gi|293392273|ref|ZP_06636607.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952807|gb|EFE02926.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter actinomycetemcomitans D7S-1] Length = 376 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q++ + A E +A G Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAKIAEECKQEAYDLFLAAAEQEKDWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F+ NP PW++ Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWIN 337 >gi|91793308|ref|YP_562959.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella denitrificans OS217] gi|91715310|gb|ABE55236.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Shewanella denitrificans OS217] Length = 376 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 5/100 (5%) Query: 2 RDESLHLNFG--IDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN I + Q ++P + E QQ++ + ++A E +A G Sbjct: 237 RDEALHLNSTQHILALMQGGKDDPEMAEIAIECQQQAYDLFYKAAEQEKEWAKYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96 +GLN QY+++I N+R + L + NP PWM Sbjct: 297 MIGLNEQILCQYVEYITNQRMKSVHLPQPYAEISNPLPWM 336 >gi|85711601|ref|ZP_01042658.1| ribonucleotide-diphosphate reductase beta subunit [Idiomarina baltica OS145] gi|85694461|gb|EAQ32402.1| ribonucleotide-diphosphate reductase beta subunit [Idiomarina baltica OS145] Length = 377 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 6/105 (5%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE++HL +IN Q ++P + +E ++ + A E +AH G Sbjct: 237 RDENVHLTSTQHMINLWQDGEDDPEMAEIAEELADEAYEIFMTAVKQEKQWAHYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVI 100 +GLN QY+++IAN R IG + P + NP PWM++ + Sbjct: 297 MIGLNESMLCQYVEYIANLRMQAIGYDAPFPEQRSNPLPWMNKYL 341 >gi|329298015|ref|ZP_08255351.1| ribonucleotide-diphosphate reductase subunit beta [Plautia stali symbiont] Length = 376 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT----MLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ KE + R + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRTGEDDPEMKEIAAECRDECFDLFKKAAEQEKEWAEYLFSGGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 >gi|260598671|ref|YP_003211242.1| ribonucleotide-diphosphate reductase subunit beta [Cronobacter turicensis z3032] gi|260217848|emb|CBA32365.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Cronobacter turicensis z3032] Length = 376 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGEDDPEMAIIAEECKQECYDLFVLAAQQEKEWAEYLFQGGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ FK NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFKTRSNPIPWIN 337 >gi|317048919|ref|YP_004116567.1| ribonucleoside-diphosphate reductase [Pantoea sp. At-9b] gi|316950536|gb|ADU70011.1| Ribonucleoside-diphosphate reductase [Pantoea sp. At-9b] Length = 376 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT----MLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ KE + R + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRTGEDDPEMKEIAAECRDECYDLFKKAAEQEKEWAEYLFSGGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 >gi|76875271|emb|CAI86492.1| ribonucleoside-diphosphate reductase 1, beta subunit [Pseudoalteromonas haloplanktis TAC125] Length = 359 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHLWTKEFQQKSRT--MLHEATLLEIAYAHETMPKG- 56 RDE+LHL+ ++N Q ++P + Q + M +A E +A G Sbjct: 220 RDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCRDEAIKMFVDAAEQEKEWAEYLFKDGS 279 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R IG FK NP PW++ Sbjct: 280 MIGLNKHILCQYVEYITNARMTAIGFPAQFKNNSNPIPWIN 320 >gi|269213593|ref|ZP_05982340.2| ribonucleoside-diphosphate reductase, beta subunit [Neisseria cinerea ATCC 14685] gi|269146056|gb|EEZ72474.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria cinerea ATCC 14685] Length = 377 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + +E Q++ + +A E +A G Sbjct: 237 RDEALHLTSTQHMLNLMRSGVDDPEMAEIAEELQEECFKLFKKAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL F+ +NP PW++ Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPIGFEGANQNPIPWIN 338 >gi|162139926|ref|YP_339935.2| ribonucleotide-diphosphate reductase subunit beta [Pseudoalteromonas haloplanktis TAC125] Length = 376 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHLWTKEFQQKSRT--MLHEATLLEIAYAHETMPKG- 56 RDE+LHL+ ++N Q ++P + Q + M +A E +A G Sbjct: 237 RDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCRDEAIKMFVDAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R IG FK NP PW++ Sbjct: 297 MIGLNKHILCQYVEYITNARMTAIGFPAQFKNNSNPIPWIN 337 >gi|251792451|ref|YP_003007177.1| ribonucleotide-diphosphate reductase subunit beta [Aggregatibacter aphrophilus NJ8700] gi|315634378|ref|ZP_07889665.1| ribonucleotide-diphosphate reductase beta subunit [Aggregatibacter segnis ATCC 33393] gi|247533844|gb|ACS97090.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter aphrophilus NJ8700] gi|315476968|gb|EFU67713.1| ribonucleotide-diphosphate reductase beta subunit [Aggregatibacter segnis ATCC 33393] Length = 376 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q++ + A E +A G Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQEKDWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F+ NP PW++ Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWIN 337 >gi|117530173|ref|YP_851016.1| ribonucleoside-diphosphate reductase beta subunit [Microcystis phage Ma-LMM01] gi|86990305|dbj|BAE79256.1| ribonucleoside-diphosphate reductase beta subunit [Microcystis phage Ma-LMM01] gi|117165785|dbj|BAF36093.1| ribonucleoside-diphosphate reductase beta subunit [Microcystis phage Ma-LMM01] gi|124270949|dbj|BAF45776.1| ribonucleoside-diphosphate reductase beta subunit [Cyanophage Ma-LMM02] gi|124270951|dbj|BAF45777.1| ribonucleoside-diphosphate reductase beta subunit [Cyanophage Ma-LMM03] gi|124270953|dbj|BAF45778.1| ribonucleoside-diphosphate reductase beta subunit [Cyanophage Ma-HPM05] Length = 348 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 15/134 (11%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I E +W + + + +A EI + + G G+N Sbjct: 218 RDEQTHLKLISNIIRTGLAEGTLMWDTD---EIIDLFRKAAEYEIEWGLH-IGLGVNGIN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVI-----DLKKEKNFFETRV 113 A + EQY +++ N R IGL +F +Y+ NP+ + D NFFE+ V Sbjct: 274 ATTIEQYAKYLCNIRARAIGLPTVFEGRQYSRNPYAHLERFAATTGEDSITRDNFFESGV 333 Query: 114 TEYQQGAEL--KWD 125 Y+ A++ WD Sbjct: 334 I-YRNPAKVVDGWD 346 >gi|113461104|ref|YP_719172.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus somnus 129PT] gi|170717681|ref|YP_001784756.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus somnus 2336] gi|112823147|gb|ABI25236.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Haemophilus somnus 129PT] gi|168825810|gb|ACA31181.1| Ribonucleoside-diphosphate reductase [Haemophilus somnus 2336] Length = 376 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q++ + A E +A G Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYELFVAAAEQEKEWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F+ NP PW++ Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWIN 337 >gi|89074073|ref|ZP_01160574.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium sp. SKA34] gi|89050211|gb|EAR55722.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium sp. SKA34] Length = 377 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E +Q + A E +A G Sbjct: 237 RDEALHLTGTQHILNLLRNGHDDPEMVEIATECEQDCFDLFKAAAEQEKEWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL P ++ T+NP PW++ Sbjct: 297 MIGLNKQILCQYVEYITNLRMVAVGLRPAYEGATQNPIPWIN 338 >gi|332534563|ref|ZP_08410398.1| ribonucleotide reductase of class Ia (aerobic), beta subunit [Pseudoalteromonas haloplanktis ANT/505] gi|332035983|gb|EGI72462.1| ribonucleotide reductase of class Ia (aerobic), beta subunit [Pseudoalteromonas haloplanktis ANT/505] Length = 376 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHLWTKEFQQKSRT--MLHEATLLEIAYAHETMPKG- 56 RDE+LHL+ ++N Q ++P + Q + M +A E +A G Sbjct: 237 RDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCRDEAIKMFVDAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R IGL F+ NP PW++ Sbjct: 297 MIGLNKHILCQYVEYITNARMTAIGLPAQFENNSNPIPWIN 337 >gi|261400675|ref|ZP_05986800.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria lactamica ATCC 23970] gi|269209585|gb|EEZ76040.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria lactamica ATCC 23970] Length = 377 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + E Q + + +A E +A G Sbjct: 237 RDEALHLTSTQHMLNLMRSGVDDPEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL F+ +NP PW++ Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 338 >gi|315126539|ref|YP_004068542.1| ribonucleotide-diphosphate reductase subunit beta [Pseudoalteromonas sp. SM9913] gi|315015053|gb|ADT68391.1| ribonucleotide-diphosphate reductase subunit beta [Pseudoalteromonas sp. SM9913] Length = 376 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHLWTKEFQ--QKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL+ ++N Q ++P + Q +++ M +A E +A G Sbjct: 237 RDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCREEAIKMFVDAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R IGL F NP PW++ Sbjct: 297 MIGLNKHILCQYVEYITNARMTAIGLPAQFDNNSNPIPWIN 337 >gi|284009345|emb|CBA76525.1| ribonucleoside-diphosphate reductase 1, beta subunit [Arsenophonus nasoniae] Length = 378 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + KE ++ + +A E +A G Sbjct: 239 RDEALHLTGTQHMLNLMRSGQDDPEMAIIAKECEEACYRLFVQAAEQEKEWAEYLFSGGS 298 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 299 MIGLNKDILCQYIEYITNIRMQAVGLKLPFETRSNPIPWIN 339 >gi|90412217|ref|ZP_01220223.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium profundum 3TCK] gi|90326941|gb|EAS43326.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium profundum 3TCK] Length = 377 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+ + EA E +A G Sbjct: 237 RDEALHLTGTQHILNLLRGRHDDPEMADIAQECQQECFEIFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GL+ + +NP PW++ Sbjct: 297 MIGLNKEILCQYVEYITNLRMKAVGLDQAYPGANQNPIPWIN 338 >gi|161572976|ref|YP_207754.2| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae FA 1090] gi|194098862|ref|YP_002001926.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae NCCP11945] gi|239999147|ref|ZP_04719071.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae 35/02] gi|240013945|ref|ZP_04720858.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae DGI18] gi|240016387|ref|ZP_04722927.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae FA6140] gi|240080506|ref|ZP_04725049.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae FA19] gi|240113126|ref|ZP_04727616.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae MS11] gi|240115882|ref|ZP_04729944.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae PID18] gi|240118180|ref|ZP_04732242.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae PID1] gi|240121514|ref|ZP_04734476.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae PID24-1] gi|240123728|ref|ZP_04736684.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae PID332] gi|240125919|ref|ZP_04738805.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae SK-92-679] gi|240128431|ref|ZP_04741092.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae SK-93-1035] gi|193934152|gb|ACF29976.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria gonorrhoeae NCCP11945] Length = 377 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + E Q + + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL F+ +NP PW++ Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 338 >gi|24373963|ref|NP_718006.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella oneidensis MR-1] gi|24348405|gb|AAN55450.1|AE015682_5 ribonucleoside-diphosphate reductase, beta subunit [Shewanella oneidensis MR-1] Length = 376 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 5/100 (5%) Query: 2 RDESLHLNFG--IDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN I I Q ++P + E QQ++ + +A E +A G Sbjct: 237 RDEALHLNSTQHILTIMQGGKDDPEMGEIAIECQQEAYNLFLKAAEQEKEWAKYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96 +GLN QY+++I N+R + L + NP PWM Sbjct: 297 MIGLNEQILCQYVEYITNQRMKSVNLPQPYAEQTNPLPWM 336 >gi|270262779|ref|ZP_06191050.1| ribonucleoside-diphosphate reductase 1 subunit beta [Serratia odorifera 4Rx13] gi|270043463|gb|EFA16556.1| ribonucleoside-diphosphate reductase 1 subunit beta [Serratia odorifera 4Rx13] Length = 359 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E QQ+ + A E +A G Sbjct: 220 RDEALHLTGTQHILNLMRSGADDPEMAEIAVECQQQCYDLFVLAAQQEKEWAEYLFRDGS 279 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F+ NP PW++ Sbjct: 280 MIGLNKDILCQYVEYITNIRMQAVGLGLPFETRSNPIPWIN 320 >gi|212638239|ref|YP_002314759.1| ribonucleotide-diphosphate reductase subunit beta [Anoxybacillus flavithermus WK1] gi|212559719|gb|ACJ32774.1| Ribonucleotide reductase, beta subunit [Anoxybacillus flavithermus WK1] Length = 345 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 30/126 (23%), Positives = 58/126 (46%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL-WTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +DE H F ++ + ENP + F + EA E ++ + + G+ Sbjct: 216 KDELCHSYFISQLVRAVLWENPQIDENGAFSAWIYDYIDEAIRYETEWSRFVL-RDIDGI 274 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM----SEVIDLKKEKNFFETRVTEY 116 + E+Y++++ N+R +GL+ + EN PW+ E ++L K +FFE R Y Sbjct: 275 DVIEMEKYIEYLGNKRLRMLGLDDRYDADENSMPWIRVFSDENVNLGK-TDFFEARPRSY 333 Query: 117 QQGAEL 122 + ++ Sbjct: 334 TKTTDV 339 >gi|149190928|ref|ZP_01869191.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio shilonii AK1] gi|148835283|gb|EDL52257.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio shilonii AK1] Length = 377 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ +E +Q + EA E +A G Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQDCFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I+N R +GL+ + + T NP PW++ Sbjct: 297 MIGLNKDILCQYVEYISNVRMQAVGLDAAYPEATSNPIPWIN 338 >gi|90581239|ref|ZP_01237037.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio angustum S14] gi|90437610|gb|EAS62803.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio angustum S14] Length = 377 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E +Q+ + A E +A G Sbjct: 237 RDEALHLTGTQHILNLLRNGHDDPEMAEIAAECEQECFDIFKAAAEQEKEWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL P + T+NP PW++ Sbjct: 297 MIGLNKQILCQYVEYITNLRMVAVGLRPAYDGATQNPIPWIN 338 >gi|15602584|ref|NP_245656.1| ribonucleotide-diphosphate reductase subunit beta [Pasteurella multocida subsp. multocida str. Pm70] gi|12721013|gb|AAK02803.1| NrdB [Pasteurella multocida subsp. multocida str. Pm70] Length = 376 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q++ + A E +A G Sbjct: 237 RDEALHLTGTQHILNIMASGQDDPEMAEIVEECKQEAYDLFVAAAEQEKEWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F+ NP PW++ Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWIN 337 >gi|119472403|ref|ZP_01614521.1| ribonucleotide-diphosphate reductase beta subunit [Alteromonadales bacterium TW-7] gi|119444925|gb|EAW26223.1| ribonucleotide-diphosphate reductase beta subunit [Alteromonadales bacterium TW-7] Length = 376 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHLWTKEFQQKSRT--MLHEATLLEIAYAHETMPKG- 56 RDE+LHL+ ++N Q ++P + Q + M +A E +A G Sbjct: 237 RDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCRDEAIKMFVQAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R IGL F+ NP PW++ Sbjct: 297 MIGLNKHILCQYVEYITNARMTAIGLPAQFENNSNPIPWIN 337 >gi|93005945|ref|YP_580382.1| ribonucleotide-diphosphate reductase subunit beta [Psychrobacter cryohalolentis K5] gi|92393623|gb|ABE74898.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Psychrobacter cryohalolentis K5] Length = 377 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++I ++P + KE ++S + +A E +A G Sbjct: 237 RDEALHLTGTQHILNLMRIGRDDPEMVDIAKECYEESIEIFRKAAEQEKEWAGYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS 97 +GLN QY+++I N R +GL F ++ NP PW++ Sbjct: 297 MIGLNKDILCQYIEYITNLRMEAVGLPVAFPNSKSNPIPWIN 338 >gi|255065945|ref|ZP_05317800.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sicca ATCC 29256] gi|255049856|gb|EET45320.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sicca ATCC 29256] Length = 377 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E Q + + +A E +A G Sbjct: 237 RDEALHLTSTQHMLNLMRAGSDDPEMAEIAVELQDECFKLFKKAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL F+ T+NP PW++ Sbjct: 297 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWIN 338 >gi|254493923|ref|ZP_05107094.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae 1291] gi|260440303|ref|ZP_05794119.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae DGI2] gi|268594982|ref|ZP_06129149.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria gonorrhoeae 35/02] gi|268596639|ref|ZP_06130806.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria gonorrhoeae FA19] gi|268599210|ref|ZP_06133377.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae MS11] gi|268601557|ref|ZP_06135724.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID18] gi|268603896|ref|ZP_06138063.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID1] gi|268682359|ref|ZP_06149221.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID332] gi|268684517|ref|ZP_06151379.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae SK-92-679] gi|268686827|ref|ZP_06153689.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae SK-93-1035] gi|291043595|ref|ZP_06569311.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria gonorrhoeae DGI2] gi|293398906|ref|ZP_06643071.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria gonorrhoeae F62] gi|59717937|gb|AAW89342.1| putative ribonucleoside diphosphate reductase I beta chain [Neisseria gonorrhoeae FA 1090] gi|226512963|gb|EEH62308.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae 1291] gi|268548371|gb|EEZ43789.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria gonorrhoeae 35/02] gi|268550427|gb|EEZ45446.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria gonorrhoeae FA19] gi|268583341|gb|EEZ48017.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae MS11] gi|268585688|gb|EEZ50364.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID18] gi|268588027|gb|EEZ52703.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID1] gi|268622643|gb|EEZ55043.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID332] gi|268624801|gb|EEZ57201.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae SK-92-679] gi|268627111|gb|EEZ59511.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae SK-93-1035] gi|291012058|gb|EFE04047.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria gonorrhoeae DGI2] gi|291610320|gb|EFF39430.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria gonorrhoeae F62] Length = 384 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + E Q + + +A E +A G Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL F+ +NP PW++ Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 345 >gi|313668429|ref|YP_004048713.1| ribonucleoside diphosphate reductase I beta chain [Neisseria lactamica ST-640] gi|313005891|emb|CBN87347.1| ribonucleoside diphosphate reductase I beta chain [Neisseria lactamica 020-06] Length = 377 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + E Q + + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFRLFKKAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL F+ +NP PW++ Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 338 >gi|296103863|ref|YP_003614009.1| ribonucleotide-diphosphate reductase beta subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058322|gb|ADF63060.1| ribonucleotide-diphosphate reductase beta subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 376 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVLAAQQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 >gi|325103985|ref|YP_004273639.1| ribonucleotide reductase [Pedobacter saltans DSM 12145] gi|324972833|gb|ADY51817.1| ribonucleotide reductase [Pedobacter saltans DSM 12145] Length = 324 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GLN 61 DE LH N GI +IN+IK E P + +Q+ ++ E+ +E G + +N Sbjct: 194 DEQLHANAGIYIINKIKEEFPEYIDEAVEQEIYDIVTESINIEDEILGWIFENGDLEHIN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +M++ + QIG + L+ +E +P W E I +FF R EY + Sbjct: 254 RRDLLNFMKYRIDVSLQQIGFKKLYNVSETEYSPMVWFEEEIFANSLDDFFAKRPVEYTK 313 >gi|241760495|ref|ZP_04758588.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria flavescens SK114] gi|241318999|gb|EER55501.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria flavescens SK114] Length = 377 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E Q + + +A E +A G Sbjct: 237 RDEALHLTSTQHMLNLMRAGADDPEMAEIAVELQDECFKLFKKAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL F+ T+NP PW++ Sbjct: 297 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWIN 338 >gi|59711808|ref|YP_204584.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio fischeri ES114] gi|197336251|ref|YP_002156001.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio fischeri MJ11] gi|59479909|gb|AAW85696.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like protein [Vibrio fischeri ES114] gi|197317741|gb|ACH67188.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio fischeri MJ11] Length = 377 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDESLHL ++N ++ ++P E +Q+ + A E +A+ G Sbjct: 237 RDESLHLTSTQHMLNLLRTGQDDPEFVEIAAECEQECFDLFKAAAEQEKQWANYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL ++ T+NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNLRMKAVGLNSAYEGATQNPIPWIN 338 >gi|260913913|ref|ZP_05920387.1| ribonucleoside-diphosphate reductase [Pasteurella dagmatis ATCC 43325] gi|260632000|gb|EEX50177.1| ribonucleoside-diphosphate reductase [Pasteurella dagmatis ATCC 43325] Length = 376 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q++ + A E +A G Sbjct: 237 RDEALHLTGTQHILNIMASGQDDPEMAEIVEECKQEAYDLFVAAAEQEKEWASYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F+ NP PW++ Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWIN 337 >gi|332162349|ref|YP_004298926.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606422|emb|CBY27920.1| ribonucleotide reductase of class Ia (aerobic),beta subunit [Yersinia enterocolitica subsp. palearctica Y11] gi|325666579|gb|ADZ43223.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330864218|emb|CBX74276.1| ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia enterocolitica W22703] Length = 376 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHILNLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F NP PW++ Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGVPFNTRTNPIPWIN 337 >gi|325578589|ref|ZP_08148689.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus parainfluenzae ATCC 33392] gi|325159825|gb|EGC71955.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus parainfluenzae ATCC 33392] Length = 376 Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q++ + A E +A G Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQEKEWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F NP PW++ Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFGARSNPIPWIN 337 >gi|301156451|emb|CBW15922.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Haemophilus parainfluenzae T3T1] Length = 376 Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q++ + A E +A G Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQEKEWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F NP PW++ Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFGARSNPIPWIN 337 >gi|312885176|ref|ZP_07744856.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio caribbenthicus ATCC BAA-2122] gi|309367189|gb|EFP94761.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio caribbenthicus ATCC BAA-2122] Length = 377 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKDAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GL+ + + T NP PW++ Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLDAAYPEATSNPIPWIN 338 >gi|298368555|ref|ZP_06979873.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sp. oral taxon 014 str. F0314] gi|298282558|gb|EFI24045.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sp. oral taxon 014 str. F0314] Length = 384 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E Q + + +A E +A G Sbjct: 244 RDEALHLTSTQHMLNLMRAGADDPEMAEIAVELQDECFKLFKKAAEQEKEWAAYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL F+ T+NP PW++ Sbjct: 304 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWIN 345 >gi|261868068|ref|YP_003255990.1| ribonucleoside-diphosphate reductase subunit beta [Aggregatibacter actinomycetemcomitans D11S-1] gi|293389919|ref|ZP_06634253.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter actinomycetemcomitans D7S-1] gi|261413400|gb|ACX82771.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter actinomycetemcomitans D11S-1] gi|290950453|gb|EFE00572.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter actinomycetemcomitans D7S-1] Length = 329 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 4/121 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60 ++E +H FGI + + ++ E P L+T EF + + + +A E A G + L Sbjct: 198 KEEEIHGRFGISLYHLLREEQPELFTDEFYAELKELAEQAFNAEKAILDWIFEDGELSFL 257 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117 + + E Y+ N +GLEP++ + W I KE +FF R T+Y Sbjct: 258 SKATVENYIANRYNNSLVTLGLEPIYNISPAQLKETEWFDIEILSTKETDFFNKRSTDYS 317 Query: 118 Q 118 + Sbjct: 318 K 318 >gi|261364564|ref|ZP_05977447.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria mucosa ATCC 25996] gi|288567131|gb|EFC88691.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria mucosa ATCC 25996] Length = 384 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E Q + + +A E +A G Sbjct: 244 RDEALHLTSTQHMLNLMRAGSDDPEMAEIAVELQDECFELFKKAAEQEKEWAAYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL F+ T+NP PW++ Sbjct: 304 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWIN 345 >gi|294140834|ref|YP_003556812.1| ribonucleoside-diphosphate reductase subunit beta [Shewanella violacea DSS12] gi|293327303|dbj|BAJ02034.1| ribonucleoside-diphosphate reductase, beta subunit [Shewanella violacea DSS12] Length = 376 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 5/100 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN ++ ++ ++P + KE +Q + + +A E +A G Sbjct: 237 RDEALHLNSTQHILKIMRAGADDPEMGEIAKECEQLAYDIFVKAAEQEKEWAQYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96 +GLN QY+++I N R + L + NP PWM Sbjct: 297 MIGLNQAILCQYVEYITNERMKSVNLPCHYDEITNPLPWM 336 >gi|269865122|ref|XP_002651812.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220063829|gb|EED42244.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] Length = 336 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 9/103 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H + ++ EA +E + E++P +G+N Sbjct: 219 RDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMN 269 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 104 QY++F+A+R +G ++ + + W + V K+ Sbjct: 270 CKLMCQYIEFVADRLLFALGERKIYTFLTHSISWKTSVCKAKQ 312 >gi|4389291|pdb|1BIQ|A Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain Mutant E238a Length = 375 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RD +LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDAALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 336 >gi|4389292|pdb|1BIQ|B Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain Mutant E238a gi|40889714|pdb|1RSV|A Chain A, Azide Complex Of The Diferrous E238a Mutant R2 Subunit Of Ribonucleotide Reductase gi|40889715|pdb|1RSV|B Chain B, Azide Complex Of The Diferrous E238a Mutant R2 Subunit Of Ribonucleotide Reductase Length = 375 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RD +LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDAALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 336 >gi|123441721|ref|YP_001005705.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088682|emb|CAL11484.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 376 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHILNLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F NP PW++ Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGIPFNTRTNPIPWIN 337 >gi|27366311|ref|NP_761839.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio vulnificus CMCP6] gi|37679427|ref|NP_934036.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio vulnificus YJ016] gi|320156821|ref|YP_004189200.1| ribonucleotide reductase of class Ia (aerobic), subunit beta [Vibrio vulnificus MO6-24/O] gi|27362512|gb|AAO11366.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Vibrio vulnificus CMCP6] gi|37198171|dbj|BAC94007.1| ribonucleotide reductase, beta subunit [Vibrio vulnificus YJ016] gi|319932133|gb|ADV86997.1| ribonucleotide reductase of class Ia (aerobic), beta subunit [Vibrio vulnificus MO6-24/O] Length = 377 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +IN ++ +E +Q+ + EA E +A G Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFSFMQIAEEAKQQCFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GL + T NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPVAYPNATSNPIPWIN 338 >gi|251790602|ref|YP_003005323.1| ribonucleotide-diphosphate reductase subunit beta [Dickeya zeae Ech1591] gi|247539223|gb|ACT07844.1| ribonucleotide reductase [Dickeya zeae Ech1591] Length = 376 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRAGQDDPEMAQVAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFETRTNPIPWIN 337 >gi|238788616|ref|ZP_04632408.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia frederiksenii ATCC 33641] gi|238723211|gb|EEQ14859.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia frederiksenii ATCC 33641] Length = 383 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+ + A E +A G Sbjct: 244 RDEALHLTGTQHILNLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F NP PW++ Sbjct: 304 MIGLNKEILCQYVEYITNIRMQAVGLGIPFNTRTNPIPWIN 344 >gi|319779630|ref|YP_004130543.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Taylorella equigenitalis MCE9] gi|317109654|gb|ADU92400.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Taylorella equigenitalis MCE9] Length = 377 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + E + + + A E A+A G Sbjct: 237 RDEALHLTSTQHMLNIMSSGADDPEMAHIASELKNQCFELFKSAAEQEKAWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GLE F + +NP PW++ Sbjct: 297 MIGLNKEILIQYVEYITNIRMSAVGLEEAFPQSKQNPIPWIN 338 >gi|271499642|ref|YP_003332667.1| ribonucleotide reductase [Dickeya dadantii Ech586] gi|270343197|gb|ACZ75962.1| ribonucleotide reductase [Dickeya dadantii Ech586] Length = 376 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRAGQDDPEMAQIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFETRTNPIPWIN 337 >gi|282600304|ref|ZP_05973774.2| ribonucleoside-diphosphate reductase, beta subunit [Providencia rustigianii DSM 4541] gi|282565783|gb|EFB71318.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia rustigianii DSM 4541] Length = 380 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E +++ + +A E +A +G Sbjct: 241 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEEQCYQLFVDAAEQEKEWAEYLFSEGS 300 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 301 MIGLNKEILCQYVEYITNIRMQAVGLKLPFEARSNPIPWIN 341 >gi|307129979|ref|YP_003881995.1| Ribonucleotide reductase of class Ia (aerobic), subunit beta [Dickeya dadantii 3937] gi|306527508|gb|ADM97438.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Dickeya dadantii 3937] Length = 376 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRAGQDDPEMAKIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFETRTNPIPWIN 337 >gi|152971181|ref|YP_001336290.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206577425|ref|YP_002237361.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella pneumoniae 342] gi|262043285|ref|ZP_06016416.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288934289|ref|YP_003438348.1| ribonucleotide reductase [Klebsiella variicola At-22] gi|330000612|ref|ZP_08303755.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp. MS 92-3] gi|150956030|gb|ABR78060.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206566483|gb|ACI08259.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella pneumoniae 342] gi|259039384|gb|EEW40524.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288889018|gb|ADC57336.1| ribonucleotide reductase [Klebsiella variicola At-22] gi|328537954|gb|EGF64133.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp. MS 92-3] Length = 376 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVLAAQQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 >gi|269102947|ref|ZP_06155644.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Photobacterium damselae subsp. damselae CIP 102761] gi|268162845|gb|EEZ41341.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Photobacterium damselae subsp. damselae CIP 102761] Length = 377 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + KE + + + A E +A G Sbjct: 237 RDEALHLTGTQHILNLLRNGHDDPEMAEIAKESEAECFDIFKRAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R + +GLE + T+NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNLRMNAVGLEHAYTGATQNPIPWIN 338 >gi|242238482|ref|YP_002986663.1| ribonucleotide-diphosphate reductase subunit beta [Dickeya dadantii Ech703] gi|242130539|gb|ACS84841.1| ribonucleotide reductase [Dickeya dadantii Ech703] Length = 376 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGQDDPEMAKVAEECQQQCYDLFVMAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFETRTNPIPWIN 337 >gi|327198722|emb|CCA61423.1| unnamed protein product [Diadromus pulchellus ascovirus 4a] Length = 395 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 1/80 (1%) Query: 40 EATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSE 98 E + +AY + F+ ++ +QY++FIAN+R + + P + ++NP P Sbjct: 303 EDEFINLAYDEYADDEVFMNISKTKLKQYIRFIANKRMEAMRYDHPFPEASDNPLPEFEI 362 Query: 99 VIDLKKEKNFFETRVTEYQQ 118 +I+ NFFE R T+Y + Sbjct: 363 MINAPINTNFFENRSTDYAR 382 >gi|290508492|ref|ZP_06547863.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella sp. 1_1_55] gi|289777886|gb|EFD85883.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella sp. 1_1_55] Length = 405 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + A E +A G Sbjct: 266 RDEALHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVLAAQQEKEWADYLFRDGS 325 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 326 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 366 >gi|326536452|ref|YP_004300883.1| NrdB aerobic ribonucleoside diphosphate reductase small subunit [Aeromonas phage 65] gi|312262798|gb|ADQ53054.1| NrdB aerobic ribonucleoside diphosphate reductase small subunit [Aeromonas phage 65] Length = 376 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 5/102 (4%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETM-PKG 56 RDE+LHL +I+ Q ++P + K + K+ ++ E E +A M K Sbjct: 237 RDENLHLKATQTIISRWQTGKDDPEMVEIAKRLEGKAVSIFEEVVAQEKEWAEYLMGDKS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE 98 GLN Y++++A+ R GL + +NP PW+++ Sbjct: 297 LNGLNRDVLCNYIEYLADNRMRSAGLPSSYAKRKNPLPWVTK 338 >gi|238895770|ref|YP_002920506.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella pneumoniae NTUH-K2044] gi|238548088|dbj|BAH64439.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 396 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + A E +A G Sbjct: 257 RDEALHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVLAAQQEKEWADYLFRDGS 316 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 317 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 357 >gi|50120137|ref|YP_049304.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium atrosepticum SCRI1043] gi|49610663|emb|CAG74108.1| ribonucleoside-diphosphate reductase 1 beta chain [Pectobacterium atrosepticum SCRI1043] Length = 376 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQGVGLSLPFQTRTNPIPWIN 337 >gi|332974578|gb|EGK11498.1| ribonucleotide-diphosphate reductase beta subunit [Kingella kingae ATCC 23330] Length = 384 Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 18/108 (16%) Query: 2 RDESLHLNF----------GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 51 RDE+LHL G+D ++ +I E Q + + +A E +A Sbjct: 244 RDEALHLTSTQHMLNLMRSGVDDLDMAEI------AAELQDECFELFKKAAEQEKEWAAY 297 Query: 52 TMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 G +GLN QY+++I N R +GL+ F + T+NP PW++ Sbjct: 298 LFKDGSMIGLNKDILCQYVEYITNHRMLAVGLQAAFPQATQNPIPWIN 345 >gi|190150315|ref|YP_001968840.1| ribonucleoside-diphosphate reductase subunit beta [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303253584|ref|ZP_07339722.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307245900|ref|ZP_07527985.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307247988|ref|ZP_07530018.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307254872|ref|ZP_07536697.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259315|ref|ZP_07541044.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307263658|ref|ZP_07545269.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189915446|gb|ACE61698.1| ribonucleoside-diphosphate reductase subunit beta [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302647504|gb|EFL77722.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306853260|gb|EFM85480.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306855503|gb|EFM87676.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306862169|gb|EFM94138.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866682|gb|EFM98541.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306871035|gb|EFN02768.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 376 Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE LHL +++N I ++P + +E +Q++ + A E +A G Sbjct: 237 RDEYLHLTGTQNMLNIIASGQDDPEMAEIAEECKQEAYDLFVAAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN +Y+++I N R +GL F + NP PW++ Sbjct: 297 MIGLNEDILVKYVEYITNIRMQAVGLPRPFAASSNPIPWIN 337 >gi|172058301|ref|YP_001814761.1| ribonucleotide-diphosphate reductase subunit beta [Exiguobacterium sibiricum 255-15] gi|171990822|gb|ACB61744.1| Ribonucleoside-diphosphate reductase [Exiguobacterium sibiricum 255-15] Length = 347 Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust. Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 6/122 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 RDE H F ++ + E+P + F + A LEI ++ E + + GL Sbjct: 217 RDELQHSYFISQLLRAVLTEHPDIDADGSFTKFVYATFERAVDLEIEWS-EYVLRDLDGL 275 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLK---KEKNFFETRVTEY 116 + Y++++AN+R IGL+ L++ + E+ PW+ D + +FFE + Y Sbjct: 276 DVSEMRDYVKYLANKRLRVIGLDDLYEGHDEDVMPWIRAYSDDSMNATKSDFFEQKSRSY 335 Query: 117 QQ 118 + Sbjct: 336 AK 337 >gi|126208467|ref|YP_001053692.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus pleuropneumoniae L20] gi|165976419|ref|YP_001652012.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303251074|ref|ZP_07337260.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307250239|ref|ZP_07532194.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307252630|ref|ZP_07534523.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307261475|ref|ZP_07543145.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|126097259|gb|ABN74087.1| ribonucleoside-diphosphate reductase subunit beta [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165876520|gb|ABY69568.1| ribonucleoside-diphosphate reductase, beta chain [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302650084|gb|EFL80254.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306857725|gb|EFM89826.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306859875|gb|EFM91895.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306868827|gb|EFN00634.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 376 Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE LHL +++N I ++P + +E +Q++ + A E +A G Sbjct: 237 RDEYLHLTGTQNMLNIIASGQDDPEMAEIAEECKQEAYDLFVAAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN +Y+++I N R +GL F + NP PW++ Sbjct: 297 MIGLNEDILVKYVEYITNIRMQAVGLPRPFAASSNPIPWIN 337 >gi|310830452|ref|YP_003965553.1| Ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus polymyxa SC2] gi|309249919|gb|ADO59485.1| Ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus polymyxa SC2] Length = 342 Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 1/100 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ H F ++ Q+ I+ P L T++ + + EA E +A E + G G++ Sbjct: 214 RDENQHCYFFAELYKQLLIDFPQLNTEQNKTFVYNFMDEAVRHETEWA-EYVLDGIEGID 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101 Y++ IAN R +GL ++ N PW+ D Sbjct: 273 LDEFRGYIRHIANNRLRLMGLPAAYEGVSNTMPWIRPFSD 312 >gi|253687496|ref|YP_003016686.1| ribonucleotide reductase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754074|gb|ACT12150.1| ribonucleotide reductase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 376 Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFQTRTNPIPWIN 337 >gi|114563305|ref|YP_750818.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella frigidimarina NCIMB 400] gi|114334598|gb|ABI71980.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Shewanella frigidimarina NCIMB 400] Length = 376 Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 5/100 (5%) Query: 2 RDESLHLNFG--IDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN I + Q ++P + E +Q++ + +A E +A G Sbjct: 237 RDEALHLNSTQHILALMQGGKDDPEMGEIAAECKQEAYDLFVKAAEQEKEWAKYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96 +GLN QY++FI N+R + L + NP PWM Sbjct: 297 MIGLNEQILCQYVEFITNQRMKSVHLPQPYDEQSNPLPWM 336 >gi|294788520|ref|ZP_06753762.1| ribonucleoside-diphosphate reductase, beta subunit [Simonsiella muelleri ATCC 29453] gi|294483397|gb|EFG31082.1| ribonucleoside-diphosphate reductase, beta subunit [Simonsiella muelleri ATCC 29453] Length = 384 Score = 42.7 bits (99), Expect = 0.019, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E + + +A E +A G Sbjct: 244 RDEALHLTSTQHMLNLMRNGTDDPEMAEIAAELHDECVALFKKAAAQEKEWAAYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GL F K +NP PW++ Sbjct: 304 MIGLNKDILGQYVEYITNLRMSAVGLPQAFPKALQNPIPWIN 345 >gi|227114436|ref|ZP_03828092.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 376 Score = 42.7 bits (99), Expect = 0.019, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFQTRTNPIPWIN 337 >gi|227328222|ref|ZP_03832246.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 376 Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFQTRTNPIPWIN 337 >gi|317492553|ref|ZP_07950980.1| ribonucleotide reductase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919303|gb|EFV40635.1| ribonucleotide reductase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 376 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E +Q+ + A E +A G Sbjct: 237 RDEALHLTGTQHILNLMRSGQDDPEMAEVAVECEQQCYDLFVLAAEQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLKLPFQTRSNPIPWIN 337 >gi|127512873|ref|YP_001094070.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella loihica PV-4] gi|126638168|gb|ABO23811.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Shewanella loihica PV-4] Length = 376 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 5/100 (5%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN ++ Q ++P + KE +Q + + +A E +A G Sbjct: 237 RDEALHLNSTQHILKLMQGGKDDPEMAEIAKECEQTAIDIFVKAAEQEKEWAKYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96 +GLN QY+++I N R + L + NP PWM Sbjct: 297 MIGLNEQILCQYVEYITNERMKSVNLVSPYADQSNPLPWM 336 >gi|261822457|ref|YP_003260563.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium wasabiae WPP163] gi|261606470|gb|ACX88956.1| ribonucleotide reductase [Pectobacterium wasabiae WPP163] Length = 376 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F+ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFQTRTNPIPWIN 337 >gi|183599610|ref|ZP_02961103.1| hypothetical protein PROSTU_03095 [Providencia stuartii ATCC 25827] gi|188021860|gb|EDU59900.1| hypothetical protein PROSTU_03095 [Providencia stuartii ATCC 25827] Length = 378 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E + + + +A E +A +G Sbjct: 239 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEDECYKLFVDAAEQEKEWAEYLFSEGS 298 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 299 MIGLNKDILCQYVEYITNIRMQAVGLKLPFEARSNPIPWIN 339 >gi|328722535|ref|XP_001944897.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like [Acyrthosiphon pisum] Length = 345 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 28/112 (25%), Positives = 56/112 (50%), Gaps = 9/112 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++ +A +E + + VG++ Sbjct: 232 RDEGLHTDFACLLFK-------HLDQKPPLTVITHIICKAVTIEQYFLTNALLVKMVGMS 284 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 113 +Y++F+A+R +++G +++ + NPFP+M +++ + + N FE RV Sbjct: 285 CEKMAEYIEFVADRLLNELGCPAVYR-SSNPFPFM-DLLSQQGKTNGFEKRV 334 >gi|193062401|ref|ZP_03043496.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli E22] gi|192932067|gb|EDV84666.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli E22] Length = 393 Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E + + + +A E +A G Sbjct: 254 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKLECYDLFVQAAQQEKDWADYLFRDGS 313 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 314 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 354 >gi|229542075|ref|ZP_04431135.1| Ribonucleoside-diphosphate reductase [Bacillus coagulans 36D1] gi|229326495|gb|EEN92170.1| Ribonucleoside-diphosphate reductase [Bacillus coagulans 36D1] Length = 347 Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust. Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 4/124 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I + E+P L T F E+ LE ++ E + + G++ Sbjct: 219 RDELEHGRFISELIRAVLSEHPELNTPAFSDWVYARFRESVDLETEWS-EYVLQDVEGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 ++++ AN+ IGL L+ ++ ENP W+ D + +FFE + Y + Sbjct: 278 LEEMAGFIKYRANKMLRMIGLSELYPEHVENPMKWIRAYADNFDATKTDFFEQKSRSYTK 337 Query: 119 GAEL 122 ++L Sbjct: 338 VSDL 341 >gi|225023977|ref|ZP_03713169.1| hypothetical protein EIKCOROL_00844 [Eikenella corrodens ATCC 23834] gi|224943002|gb|EEG24211.1| hypothetical protein EIKCOROL_00844 [Eikenella corrodens ATCC 23834] Length = 384 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E + + +A E +A G Sbjct: 244 RDEALHLTSTQHMLNLMRSGTDDPEMAEIAAELENDCFELFKKAAEQEKEWAEYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GL F T+NP PW++ Sbjct: 304 MIGLNKDILCQYVEYITNHRMMAVGLNAAFPAATQNPIPWIN 345 >gi|209695249|ref|YP_002263178.1| ribonucleotide-diphosphate reductase subunit beta [Aliivibrio salmonicida LFI1238] gi|208009201|emb|CAQ79455.1| ribonucleoside-diphosphate reductase 1 beta chain [Aliivibrio salmonicida LFI1238] Length = 377 Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P E +Q + A E +A+ G Sbjct: 237 RDEALHLTSTQHMVNLLRTGQDDPEFVEIAAECEQDCFDLFKAAAEQEKEWANYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL + T+NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNLRMKAVGLSGAYDGATQNPIPWIN 338 >gi|307257037|ref|ZP_07538813.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306864521|gb|EFM96428.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 376 Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE LHL +++N I ++P + +E +Q++ + A E +A G Sbjct: 237 RDEYLHLTGTQNMLNIIASGQDDPEMAEIAEECKQEAYDLFVAAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN +Y+++I N R +GL F NP PW++ Sbjct: 297 MIGLNEDILVKYVEYITNIRMQAVGLPRPFATASNPIPWIN 337 >gi|238794995|ref|ZP_04638591.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia intermedia ATCC 29909] gi|238725698|gb|EEQ17256.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia intermedia ATCC 29909] Length = 376 Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHILNLMRSGEDDPEMAEIAIECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F NP PW++ Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGVPFATRTNPIPWIN 337 >gi|315930891|gb|EFV09876.1| ribonucleotide reductase, small chain family protein [Campylobacter jejuni subsp. jejuni 305] Length = 305 Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 40/85 (47%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+ E K M +A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF 86 E+Y+ ++ ++R I L+ L+ Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLY 300 >gi|237747538|ref|ZP_04578018.1| ribonucleotide-diphosphate reductase subunit beta [Oxalobacter formigenes OXCC13] gi|229378900|gb|EEO28991.1| ribonucleotide-diphosphate reductase subunit beta [Oxalobacter formigenes OXCC13] Length = 376 Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + KE +++S + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMGSGEDDPDMAEIAKECREQSIDLFVRAAEQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +G+ F+ NP PW++ Sbjct: 297 MIGLNRDILCQYVEYITNTRMQAVGMPLPFEIRSNPIPWIN 337 >gi|238760194|ref|ZP_04621340.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia aldovae ATCC 35236] gi|238701573|gb|EEP94144.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia aldovae ATCC 35236] Length = 376 Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHILNLMRAGEDDPEMAEIAIECQQQCYDLFVLAAEQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F NP PW++ Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGIPFATRTNPIPWIN 337 >gi|325268103|ref|ZP_08134749.1| ribonucleotide-diphosphate reductase beta subunit [Kingella denitrificans ATCC 33394] gi|324980488|gb|EGC16154.1| ribonucleotide-diphosphate reductase beta subunit [Kingella denitrificans ATCC 33394] Length = 384 Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL-WTK---EFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ + W + + QQ+ + +A E +A G Sbjct: 244 RDEALHLTSTQHMLNLMRGGSEGTEWAQIAQDLQQECFDLFVKAAEQEKEWASYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GL F K T+NP PW++ Sbjct: 304 MIGLNKDILCQYVEYITNHRMLAVGLPVAFPKSTQNPIPWIN 345 >gi|294637129|ref|ZP_06715438.1| ribonucleoside-diphosphate reductase, beta subunit [Edwardsiella tarda ATCC 23685] gi|291089663|gb|EFE22224.1| ribonucleoside-diphosphate reductase, beta subunit [Edwardsiella tarda ATCC 23685] Length = 376 Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E + + + +A E +A G Sbjct: 237 RDEALHLTGTQHILNLMRSGQDDPEMAEIAAECETQCYDLFVQAAQQEKDWASYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F+ NP PW++ Sbjct: 297 MIGLNRDILCQYVEYITNIRMQAVGLSLPFETRSNPIPWIN 337 >gi|167623961|ref|YP_001674255.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella halifaxensis HAW-EB4] gi|167353983|gb|ABZ76596.1| Ribonucleoside-diphosphate reductase [Shewanella halifaxensis HAW-EB4] Length = 376 Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 5/100 (5%) Query: 2 RDESLHLNFG--IDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN I I Q ++P + KE +Q + + +A E +A G Sbjct: 237 RDEALHLNSTQHILKIMQGGKDDPEMAEIAKECEQTAIDIFVKAAEQEKEWAKYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96 +GLN QY+++I N R + + NP PWM Sbjct: 297 MIGLNETILCQYVEYITNERMKSVNFASPYAEQTNPLPWM 336 >gi|215275540|sp|P0C8I2|RIR2_ASFWA RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit Length = 327 Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 11/120 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE---IAYAHETMPKGFV 58 RDE +H +F +I+ P ++ +L EA L I+YA + Sbjct: 196 RDEGVHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFISYAFDKARGRVP 249 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117 G + QY+++ + C + + ++K NPFP M++ + EK NFFE R T+YQ Sbjct: 250 GFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEKTNFFELRPTQYQ 308 >gi|323494790|ref|ZP_08099889.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio brasiliensis LMG 20546] gi|323310983|gb|EGA64148.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio brasiliensis LMG 20546] Length = 377 Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKDAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GL+ + + T NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDAAYPEATSNPIPWIN 338 >gi|157371509|ref|YP_001479498.1| ribonucleotide-diphosphate reductase subunit beta [Serratia proteamaculans 568] gi|157323273|gb|ABV42370.1| Ribonucleoside-diphosphate reductase [Serratia proteamaculans 568] Length = 376 Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGADDPEMAEIAVECQQQCYDLFVLAAEQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGLPFATRSNPIPWIN 337 >gi|269139684|ref|YP_003296385.1| ribonucleotide reductase, beta subunit [Edwardsiella tarda EIB202] gi|267985345|gb|ACY85174.1| ribonucleotide reductase, beta subunit [Edwardsiella tarda EIB202] gi|304559553|gb|ADM42217.1| Ribonucleotide reductase of class Ia, beta subunit [Edwardsiella tarda FL6-60] Length = 376 Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E + + + +A E +A G Sbjct: 237 RDEALHLTGTQHILNLMRSGQDDPEMAEIAAECEDQCYDLFVQAAQQEKEWAGYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F+ NP PW++ Sbjct: 297 MIGLNRDILCQYVEYITNIRMQAVGLSLPFETRSNPIPWIN 337 >gi|260778827|ref|ZP_05887719.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio coralliilyticus ATCC BAA-450] gi|260604991|gb|EEX31286.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio coralliilyticus ATCC BAA-450] Length = 377 Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKDAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GL+ + + T NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDAAYPEATSNPIPWIN 338 >gi|326783875|ref|YP_004324269.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM7] gi|310003887|gb|ADO98282.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM7] Length = 388 Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 10/110 (9%) Query: 2 RDESLHLNFGIDVI-NQIKIENPHLWTKEFQQKSRT----MLHEATLLEIAYAHETMPKG 56 RDE+ HL +++ N + ++P + K+ + R M A E +A G Sbjct: 248 RDENQHLVLTQNILKNWMNGDDPEM--KQIADEERNNVIGMFRNAVEEEKEWAEYLFSGG 305 Query: 57 -FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK--YTENPFPWMSEVIDLK 103 +GLN QY+++IAN+R +G +P++ NP PW I K Sbjct: 306 SMIGLNDKLLNQYVEWIANKRMKALGFDPIYDQPLRNNPLPWTQHWISSK 355 >gi|119774862|ref|YP_927602.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella amazonensis SB2B] gi|119767362|gb|ABL99932.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Shewanella amazonensis SB2B] Length = 391 Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 5/100 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEF----QQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN ++N ++ E QQ++ + A E +A G Sbjct: 252 RDEALHLNSTQHILNIMQGGKDDAEMAEIAIECQQEAYDLFLRAAEQEKEWAKYLFKDGS 311 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96 +GLN QY+++I N+R + L + + NP PWM Sbjct: 312 MIGLNEQILCQYVEYITNQRMKSVNLPLPYPESTNPLPWM 351 >gi|323145837|gb|ADX32078.1| hypothetical protein [Pseudomonas phage P3_CHA] gi|323146023|gb|ADX32263.1| hypothetical protein [Pseudomonas phage PAK_P3] Length = 344 Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust. Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 1/120 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 + DE+ H+ I V+ ++ + Q+ R ++ + E+ Y KG Sbjct: 205 LADETDHVEKNIRVLKAMRKDLTPEENSILDQEIRYLIEDYREAEVKYLVLAFEKGPQHD 264 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L +Y+ ++ R + L + ENP PWM +I+ + NFFE +VT+Y Sbjct: 265 LTFEQTVEYIDYLCRLRLFECELLKEHQVGENPLPWMEWMINAARHDNFFEKKVTDYSHS 324 >gi|322514736|ref|ZP_08067762.1| ribonucleotide-diphosphate reductase beta subunit [Actinobacillus ureae ATCC 25976] gi|322119331|gb|EFX91447.1| ribonucleotide-diphosphate reductase beta subunit [Actinobacillus ureae ATCC 25976] Length = 376 Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE LHL +++N + ++P + +E +Q++ + A E +A G Sbjct: 237 RDEYLHLTGTQNMLNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN +Y+++I N R +GL F + NP PW++ Sbjct: 297 MIGLNEDILVKYVEYITNIRMQAVGLPRPFATSSNPIPWIN 337 >gi|330971158|gb|EGH71224.1| hypothetical protein PSYAR_11719 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 25 Score = 42.0 bits (97), Expect = 0.032, Method: Compositional matrix adjust. Identities = 17/20 (85%), Positives = 19/20 (95%) Query: 91 NPFPWMSEVIDLKKEKNFFE 110 NPFPWMSE+I LKKE+NFFE Sbjct: 2 NPFPWMSEIIALKKERNFFE 21 >gi|238785708|ref|ZP_04629683.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia bercovieri ATCC 43970] gi|238713393|gb|EEQ05430.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia bercovieri ATCC 43970] Length = 376 Score = 41.6 bits (96), Expect = 0.033, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E Q + + A E +A G Sbjct: 237 RDEALHLTGTQHILNLMRSGEDDPEMAEIAEECQSQCYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F NP PW++ Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGVPFNTRSNPIPWIN 337 >gi|327198239|ref|YP_004306815.1| putative ribonucleotide reductase B subunit [Pseudomonas phage KPP10] gi|297591765|dbj|BAJ09185.1| putative ribonucleotide reductase B subunit [Pseudomonas phage KPP10] Length = 339 Score = 41.6 bits (96), Expect = 0.035, Method: Compositional matrix adjust. Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 1/120 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 + DE+ H+ I V+ ++ + Q+ R ++ + E+ Y KG Sbjct: 200 LADETDHVEKNIRVLKAMRKDLTPEENAILDQEIRYLIEDYREAEVKYLVLAFEKGPQHD 259 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L +Y+ ++ R + L + ENP PWM +I+ + NFFE +VT+Y Sbjct: 260 LTFEQTVEYIDYLCRLRLFECELLKEHQVGENPLPWMEWMINAARHDNFFEKKVTDYSHS 319 >gi|261253084|ref|ZP_05945657.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio orientalis CIP 102891] gi|260936475|gb|EEX92464.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio orientalis CIP 102891] Length = 377 Score = 41.6 bits (96), Expect = 0.035, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ +E +Q+ + EA E +A G Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GL + + T NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGAAYPEATSNPIPWIN 338 >gi|84386981|ref|ZP_00990005.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio splendidus 12B01] gi|86148466|ref|ZP_01066756.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp. MED222] gi|218709927|ref|YP_002417548.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio splendidus LGP32] gi|84378271|gb|EAP95130.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio splendidus 12B01] gi|85833763|gb|EAQ51931.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp. MED222] gi|218322946|emb|CAV19123.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio splendidus LGP32] Length = 377 Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ +E +Q+ + EA E +A G Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFEFMQIAEECKQECFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GL + + T NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGTAYPEATSNPIPWIN 338 >gi|323497713|ref|ZP_08102728.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio sinaloensis DSM 21326] gi|323317189|gb|EGA70185.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio sinaloensis DSM 21326] Length = 377 Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ +E +Q+ + EA E +A G Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GL + + T NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGAAYPEATSNPIPWIN 338 >gi|27904669|ref|NP_777795.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|38605263|sp|Q89AS5|RIR2_BUCBP RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit gi|27904066|gb|AAO26900.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 376 Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQI----KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + E +KE ++ + + E +A G Sbjct: 237 RDEALHLTSTQHILNILHNDKNNEGMSDISKECYEECYHLFIRVSDQEKIWAKYLFQNGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R IGL FK NP PW++ Sbjct: 297 MLGLNQEILSQYIEYITNIRMKAIGLPSPFKILSNPIPWIN 337 >gi|21672460|ref|NP_660527.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25091143|sp|Q8K9W4|RIR2_BUCAP RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit gi|21623075|gb|AAM67738.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 376 Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 25/42 (59%) Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R H IG + F+ T NP PW++ Sbjct: 296 SMLGLNKDILCQYIEYITNIRMHAIGFKMPFEKTSNPIPWIN 337 >gi|148978906|ref|ZP_01815226.1| ribonucleotide-diphosphate reductase beta subunit [Vibrionales bacterium SWAT-3] gi|145962104|gb|EDK27390.1| ribonucleotide-diphosphate reductase beta subunit [Vibrionales bacterium SWAT-3] Length = 377 Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ +E +Q+ + EA E +A G Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFAFMQIAEECKQECFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GL + + T NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGTAYPEATSNPIPWIN 338 >gi|294505968|ref|YP_003570026.1| Ribonucleoside-diphosphate reductase beta subunit [Salinibacter ruber M8] gi|294342296|emb|CBH23074.1| Ribonucleoside-diphosphate reductase beta subunit [Salinibacter ruber M8] Length = 324 Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 4/121 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60 ++E +H FG++++N I+ E+P + F+Q+ R EA E G + L Sbjct: 193 KEEQIHGLFGVELMNIIREEHPEWFGPAFEQEVRAACEEAYDAEQKVLDWIFADGELDFL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117 P + +++ N + ++P+F+ W E I L K +FF R T Y Sbjct: 253 PRPVVDAFLRDKFNESLKNVDVDPIFEVDPEHLGETRWFYEEILLTKGNDFFSKRSTSYS 312 Query: 118 Q 118 + Sbjct: 313 K 313 >gi|91775577|ref|YP_545333.1| ribonucleotide-diphosphate reductase subunit beta [Methylobacillus flagellatus KT] gi|91709564|gb|ABE49492.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Methylobacillus flagellatus KT] Length = 377 Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P E Q + M A E +A G Sbjct: 237 RDEALHLTGTQHMLNIMRSGQDDPEFAGIASELQDECFEMFKRAAEQEKKWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS 97 +GLN QY+++I N R +GL F + NP PW++ Sbjct: 297 MIGLNRDILCQYVEYITNNRMASVGLSAAFPNAKNNPIPWIN 338 >gi|163786628|ref|ZP_02181076.1| ribonucleoside-diphosphate reductase , beta subunit 1 [Flavobacteriales bacterium ALC-1] gi|159878488|gb|EDP72544.1| ribonucleoside-diphosphate reductase , beta subunit 1 [Flavobacteriales bacterium ALC-1] Length = 429 Score = 41.2 bits (95), Expect = 0.048, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 18/128 (14%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEI--------AYAHETM 53 ++E++H +FGID+I IK ENP + E + R + EA E A E + Sbjct: 298 KEENIHGDFGIDIIKIIKAENPTWFDAEHNEIVRELCREAFASESELVDWIFEAGELEFL 357 Query: 54 PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFE 110 PK + ++++ N IG+E +F E W + I K +FF Sbjct: 358 PKDVIN-------EFLKNRFNNSLESIGIEKVFDVDETLLTQTEWFDDEIIGTKHGDFFV 410 Query: 111 TRVTEYQQ 118 R Y + Sbjct: 411 KRSINYSK 418 >gi|162849427|emb|CAN10392.1| Ribonucleotide reductase small subunit [African swine fever virus OURT 88/3] gi|291289488|emb|CBH29145.1| BA71V-F334L [African swine fever virus E75] gi|303398729|emb|CBW46710.1| F334L [African swine fever virus Georgia 2007/1] Length = 334 Score = 41.2 bits (95), Expect = 0.049, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 11/120 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE---IAYAHETMPKGFV 58 RDE +H +F +I+ P ++ +L EA L I YA + Sbjct: 203 RDEGMHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFINYAFDKARGRVP 256 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117 G + QY+++ + C + + ++K NPFP M++ + EK NFFE R T+YQ Sbjct: 257 GFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEKTNFFELRPTQYQ 315 >gi|86140897|ref|ZP_01059456.1| ribonucleoside-diphosphate reductase, beta subunit 1 [Leeuwenhoekiella blandensis MED217] gi|85832839|gb|EAQ51288.1| ribonucleoside-diphosphate reductase, beta subunit 1 [Leeuwenhoekiella blandensis MED217] Length = 427 Score = 41.2 bits (95), Expect = 0.052, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 4/121 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60 ++E +H +FG+D+IN IK ENP + +E + M + E KG + L Sbjct: 296 KEEQIHGDFGVDIINIIKKENPEWFDEEHNNLIKEMCLNSFEAESKVVDWIFEKGELDFL 355 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQ 117 ++++ N+ IGLE LF E W + I K +FF R Y Sbjct: 356 PKAVINEFLKNRFNKSLEAIGLEKLFDIDEALLQETEWFDDEIIGTKHGDFFVKRSINYS 415 Query: 118 Q 118 + Sbjct: 416 K 416 >gi|238920521|ref|YP_002934036.1| ribonucleotide-diphosphate reductase subunit beta [Edwardsiella ictaluri 93-146] gi|238870090|gb|ACR69801.1| ribonucleoside-diphosphate reductase, beta subunit, putative [Edwardsiella ictaluri 93-146] Length = 376 Score = 41.2 bits (95), Expect = 0.054, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E + + +A E +A G Sbjct: 237 RDEALHLTGTQHILNLMRAGQDDPEMAEIATECASQCYDLFVQAAQQEKEWAGYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL F+ NP PW++ Sbjct: 297 MIGLNRDILCQYVEYITNIRMQAVGLPLPFETRSNPIPWIN 337 >gi|116326775|ref|YP_803312.1| hypothetical protein TNAV2c_gp089 [Trichoplusia ni ascovirus 2c] gi|102231783|gb|ABF70606.1| hypothetical protein [Trichoplusia ni ascovirus 2c] Length = 269 Score = 41.2 bits (95), Expect = 0.054, Method: Compositional matrix adjust. Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 8/91 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N + + P+ + +L EA ++E + + +P +G+N Sbjct: 172 RDEGLHTDFACLMYNYVVQKPPN-------SRVIEILKEAVVIEKDFLTDALPVRLLGMN 224 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENP 92 QY++F+A+R +++ E + +NP Sbjct: 225 CDLMSQYIEFVADRLLYELIGEKYYN-AKNP 254 >gi|33152746|ref|NP_874099.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus ducreyi 35000HP] gi|33148970|gb|AAP96488.1| ribonucleoside-diphosphate reductase, beta chain [Haemophilus ducreyi 35000HP] Length = 376 Score = 40.8 bits (94), Expect = 0.055, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE LHL ++N I ++P + E QQ++ + A E +A G Sbjct: 237 RDEYLHLAGTQQMLNIIASGQDDPEMAEIAIECQQEAYDLFVAAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN +Y+++I N R +GL F NP PW++ Sbjct: 297 MIGLNKEILVKYVEYITNIRMQSVGLPLPFATQSNPIPWIN 337 >gi|162849254|emb|CAN10143.1| Ribonucleotide reductase small subunit [African swine fever virus Benin 97/1] Length = 327 Score = 40.8 bits (94), Expect = 0.056, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 11/120 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE---IAYAHETMPKGFV 58 RDE +H +F +I+ P ++ +L EA L I YA + Sbjct: 196 RDEGMHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFINYAFDKARGRVP 249 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117 G + QY+++ + C + + ++K NPFP M++ + EK NFFE R T+YQ Sbjct: 250 GFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEKTNFFELRPTQYQ 308 >gi|9628152|ref|NP_042738.1| ribonucleotide reductase small subunit [African swine fever virus] gi|1172939|sp|P42492|RIR2_ASFB7 RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|780414|gb|AAA65274.1| ribonucleotide reductase small subunit [African swine fever virus] gi|1097433|prf||2113434AT ribonucleotide reductase:SUBUNIT=small Length = 334 Score = 40.8 bits (94), Expect = 0.062, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 11/120 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE---IAYAHETMPKGFV 58 RDE +H +F +I+ P ++ +L EA L I YA + Sbjct: 203 RDEGVHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFINYAFDKARGRVP 256 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117 G + QY+++ + C + + ++K NPFP M++ + EK NFFE R T+YQ Sbjct: 257 GFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEKTNFFELRPTQYQ 315 >gi|148688624|gb|EDL20571.1| mCG140327 [Mus musculus] Length = 65 Score = 40.8 bits (94), Expect = 0.062, Method: Compositional matrix adjust. Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 2/49 (4%) Query: 70 QFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +F+A+ ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 1 EFVADMLMLELGFNKIFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 47 >gi|215275539|sp|P0C8I1|RIR2_ASFP4 RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit Length = 327 Score = 40.8 bits (94), Expect = 0.065, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 11/120 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE---IAYAHETMPKGFV 58 RDE +H +F +I+ P ++ +L EA L I YA + Sbjct: 196 RDEGVHCSFACFLISNYVYNIPE------ERIIHKILKEAVELVDEFINYAFDKARGRVP 249 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117 G + QY+++ + C + + ++K NPFP M++ + EK NFFE R T+YQ Sbjct: 250 GFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEKTNFFELRPTQYQ 308 >gi|83814991|ref|YP_444284.1| ribonucleoside-diphosphate reductase, beta subunit [Salinibacter ruber DSM 13855] gi|83756385|gb|ABC44498.1| ribonucleoside-diphosphate reductase, beta subunit [Salinibacter ruber DSM 13855] Length = 324 Score = 40.8 bits (94), Expect = 0.065, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 4/121 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60 ++E +H FG++++N I+ E+P + F+Q+ R EA E G + L Sbjct: 193 KEEQIHGLFGVELMNIIREEHPEWFGPAFEQEVRAACEEAYDAEQKVLDWIFADGELDFL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117 P + +++ N + ++P+F+ W E + L K +FF R T Y Sbjct: 253 PRPVVDAFLRDKFNESLKNVDVDPIFEVDPEHLGETRWFYEEVLLTKGNDFFSKRSTSYS 312 Query: 118 Q 118 + Sbjct: 313 K 313 >gi|48696741|ref|YP_024565.1| ORF20 [Ostreid herpesvirus 1] gi|81986458|sp|Q6R7K3|RIR2_OSHVF RecName: Full=Ribonucleoside-diphosphate reductase small chain gi|41352405|gb|AAS00912.1| ORF20 [Ostreid herpesvirus 1] Length = 579 Score = 40.4 bits (93), Expect = 0.073, Method: Compositional matrix adjust. Identities = 28/120 (23%), Positives = 61/120 (50%), Gaps = 13/120 (10%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+LH F +++ ++ + P ++ +L EAT +E+ +A +P+G + Sbjct: 256 RDETLHFRFYAELL-RLMPDRPS------DERIAELLTEATEIELEFAEYVVPEGVKYIT 308 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-----KYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 Q+++ N+ C + + P++ +P +M+ ++ +++ NFFE + TEY Sbjct: 309 KDRLIQHVKANTNQVCEMLDINPIYFDQKGNVLLSPLLYMN-TLESEQKINFFEGKATEY 367 >gi|149197800|ref|ZP_01874849.1| ribonucleotide-diphosphate reductase beta subunit [Lentisphaera araneosa HTCC2155] gi|149139021|gb|EDM27425.1| ribonucleotide-diphosphate reductase beta subunit [Lentisphaera araneosa HTCC2155] Length = 376 Score = 40.4 bits (93), Expect = 0.074, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 7/102 (6%) Query: 2 RDESLHLNFGIDVINQIKIE---NPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG 56 RDE+LHL G + QI E +P + E + + + A E +A G Sbjct: 237 RDEALHLT-GTQQMIQIFREGKDDPEMAEIAAECEGQVYQIFSSAAEQEKEWAKFLFRDG 295 Query: 57 -FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLNA Y+++I N R G + +F T+NP PWM+ Sbjct: 296 SMIGLNADILGDYVEYITNVRLKASGYKNVFPTTQNPLPWMN 337 >gi|157961884|ref|YP_001501918.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella pealeana ATCC 700345] gi|157846884|gb|ABV87383.1| Ribonucleoside-diphosphate reductase [Shewanella pealeana ATCC 700345] Length = 376 Score = 40.4 bits (93), Expect = 0.076, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 5/100 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN ++ + ++P + KE +Q + + +A E +A G Sbjct: 237 RDEALHLNSTQHILKIMHAGKDDPEMAEIAKECEQTAIDIFIKAAEQEKEWAKYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96 +GLN QY+++I N R + + NP PWM Sbjct: 297 MIGLNETILCQYVEYITNERMKAVNFASPYAEQTNPLPWM 336 >gi|218768312|ref|YP_002342824.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria meningitidis Z2491] gi|121052320|emb|CAM08650.1| ribonucleoside diphosphate reductase I beta chain [Neisseria meningitidis Z2491] gi|261392428|emb|CAX49973.1| ribonucleoside-diphosphate reductase beta subunit (ribonucleotide reductase) [Neisseria meningitidis 8013] Length = 377 Score = 40.4 bits (93), Expect = 0.076, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++ + E Q + + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL F+ +NP PW++ Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 338 >gi|297250515|ref|ZP_06864465.2| ribonucleoside-diphosphate reductase, beta subunit [Neisseria polysaccharea ATCC 43768] gi|296838835|gb|EFH22773.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria polysaccharea ATCC 43768] Length = 377 Score = 40.4 bits (93), Expect = 0.076, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++ + E Q + + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL F+ +NP PW++ Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 338 >gi|161353784|ref|NP_274308.2| ribonucleotide-diphosphate reductase subunit beta [Neisseria meningitidis MC58] gi|304387414|ref|ZP_07369605.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria meningitidis ATCC 13091] gi|304338507|gb|EFM04626.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria meningitidis ATCC 13091] gi|316984078|gb|EFV63056.1| ribonucleoside-diphosphate reductase 1 subunit beta [Neisseria meningitidis H44/76] gi|325134468|gb|EGC57113.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis M13399] gi|325140485|gb|EGC63006.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis CU385] gi|325144569|gb|EGC66868.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis M01-240013] gi|325200084|gb|ADY95539.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis H44/76] gi|325204292|gb|ADY99745.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis M01-240355] gi|325205936|gb|ADZ01389.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis M04-240196] Length = 377 Score = 40.4 bits (93), Expect = 0.076, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++ + E Q + + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL F+ +NP PW++ Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 338 >gi|82492124|gb|ABB77921.1| ribonucleotide reductase beta chain [Environmental halophage 1 AAJ-2005] Length = 358 Score = 40.4 bits (93), Expect = 0.077, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 4/121 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60 ++E +H FG +++ I+ ENP L+ +F + + +A E + G + L Sbjct: 227 KEEQIHGLFGQELVETIREENPDLFDDDFTDEIQDACQQAYEAESEILDWILEDGELDFL 286 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117 + +++ N+ G++P+F E+ W E I + KE +FF R T Y Sbjct: 287 PREHIDAFLKDRFNQSLDNAGVDPVFDPDEDVVDETRWFDEDIMMTKENDFFSKRSTTYN 346 Query: 118 Q 118 + Sbjct: 347 K 347 >gi|121635003|ref|YP_975248.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria meningitidis FAM18] gi|120866709|emb|CAM10461.1| ribonucleoside diphosphate reductase I beta chain [Neisseria meningitidis FAM18] gi|325128288|gb|EGC51172.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis N1568] gi|325130346|gb|EGC53112.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis OX99.30304] gi|325132508|gb|EGC55201.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis M6190] gi|325136206|gb|EGC58814.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis M0579] gi|325138282|gb|EGC60851.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis ES14902] gi|325142424|gb|EGC64828.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis 961-5945] gi|325198443|gb|ADY93899.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis G2136] gi|325201998|gb|ADY97452.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis M01-240149] Length = 377 Score = 40.4 bits (93), Expect = 0.079, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++ + E Q + + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL F+ +NP PW++ Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 338 >gi|319410557|emb|CBY90925.1| ribonucleoside-diphosphate reductase beta subunit (ribonucleotide reductase) [Neisseria meningitidis WUE 2594] gi|325208250|gb|ADZ03702.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis NZ-05/33] Length = 384 Score = 40.4 bits (93), Expect = 0.082, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++ + E Q + + +A E +A G Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL F+ +NP PW++ Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 345 >gi|161870162|ref|YP_001599332.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria meningitidis 053442] gi|161595715|gb|ABX73375.1| ribonucleoside diphosphate reductase I beta chain [Neisseria meningitidis 053442] Length = 384 Score = 40.4 bits (93), Expect = 0.082, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++ + E Q + + +A E +A G Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL F+ +NP PW++ Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 345 >gi|260768282|ref|ZP_05877216.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio furnissii CIP 102972] gi|260616312|gb|EEX41497.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio furnissii CIP 102972] gi|315179989|gb|ADT86903.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio furnissii NCTC 11218] Length = 377 Score = 40.4 bits (93), Expect = 0.084, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMINLLRNGMDDFEFLQIAEECKQECFDLFKQAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLN QY+++I N R +GL+ + T NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDAAYPSATTNPIPWIN 338 >gi|308389409|gb|ADO31729.1| ribonucleoside diphosphate reductase I beta chain [Neisseria meningitidis alpha710] Length = 384 Score = 40.4 bits (93), Expect = 0.085, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++ + E Q + + +A E +A G Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL F+ +NP PW++ Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 345 >gi|254805092|ref|YP_003083313.1| ribonucleoside-diphosphate reductase beta chain [Neisseria meningitidis alpha14] gi|254668634|emb|CBA06257.1| ribonucleoside-diphosphate reductase beta chain [Neisseria meningitidis alpha14] Length = 384 Score = 40.4 bits (93), Expect = 0.085, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++ + E Q + + +A E +A G Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL F+ +NP PW++ Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 345 >gi|7226528|gb|AAF41664.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis MC58] gi|254670476|emb|CBA06168.1| ribonucleoside-diphosphate reductase beta chain [Neisseria meningitidis alpha153] Length = 384 Score = 40.4 bits (93), Expect = 0.086, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++ + E Q + + +A E +A G Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL F+ +NP PW++ Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 345 >gi|295134784|ref|YP_003585460.1| ribonucleotide reductase [Zunongwangia profunda SM-A87] gi|294982799|gb|ADF53264.1| ribonucleotide reductase [Zunongwangia profunda SM-A87] Length = 324 Score = 40.4 bits (93), Expect = 0.089, Method: Compositional matrix adjust. Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 12/124 (9%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQK-----SRTMLHEATLLEIAYAHETMPKGF 57 DE +H N GI +INQI+ E P + +E +K +R++ E +L+ + + + Sbjct: 194 DEQIHANAGIYIINQIREEYPDYFNEEMTRKLTDVVTRSIEVEEEILDWIFENGQLE--- 250 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVT 114 +N + +M+F + IGL + T P W E + +FF R Sbjct: 251 -NINKKNLMDFMKFRLDDSLKSIGLPKQYNITAAEYQPMLWFEEEVFANSLDDFFARRPV 309 Query: 115 EYQQ 118 +Y + Sbjct: 310 DYTK 313 >gi|322515075|ref|ZP_08068083.1| ribonucleoside-diphosphate reductase beta subunit [Actinobacillus ureae ATCC 25976] gi|322118955|gb|EFX91132.1| ribonucleoside-diphosphate reductase beta subunit [Actinobacillus ureae ATCC 25976] Length = 326 Score = 40.4 bits (93), Expect = 0.091, Method: Compositional matrix adjust. Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 8/123 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60 ++E +H FGI + ++ E+ L+T EF ++ +T+ +A E +G + + Sbjct: 195 KEEEIHGKFGIALYEILRDEHSELFTPEFFEELKTLSTQAFEAECGILDWIFEEGDLSFI 254 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENP-----FPWMSEVIDLKKEKNFFETRVTE 115 + + E Y++ N +GLEP Y NP W I KE +FF R T+ Sbjct: 255 SREAVENYIRSRYNNSLMTLGLEP--PYDVNPELLKETEWFDIEILSTKETDFFNKRSTD 312 Query: 116 YQQ 118 Y + Sbjct: 313 YSK 315 >gi|228926484|ref|ZP_04089556.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228833308|gb|EEM78873.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 322 Score = 40.4 bits (93), Expect = 0.093, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 5/117 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AYA E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYAEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP D K +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304 >gi|34419511|ref|NP_899524.1| aerobic ribonucleoside diphosphate reductase small subunit [Vibrio phage KVP40] gi|34333192|gb|AAQ64347.1| aerobic ribonucleoside diphosphate reductase small subunit [Vibrio phage KVP40] Length = 374 Score = 40.4 bits (93), Expect = 0.093, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 5/100 (5%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKGF 57 RDE LHL +I+ Q ++P + + Q ++ + + E +AH +G Sbjct: 235 RDEQLHLKGTQALISIWQNYKDDPEMAEISLRLQPEAEKIFMQVVDQEKEWAHSLFSQGT 294 Query: 58 V-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96 V GLNA +Y++++A+ R +GL + ++P PW+ Sbjct: 295 VPGLNAQILCEYVEYLADSRMRSVGLNSPYPRRKHPLPWI 334 >gi|332974193|gb|EGK11127.1| ribonucleotide-diphosphate reductase beta subunit [Psychrobacter sp. 1501(2011)] Length = 377 Score = 40.0 bits (92), Expect = 0.096, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN + ++P + ++ +++S + +A E +A G Sbjct: 237 RDEALHLTSTQHMINILASGKDDPEMAEIAEDCREESIEIFRKAAEQEKEWAGYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS 97 +GLN QY+++I N R +GL +F ++ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNLRMEAVGLPSIFPDSKSNPIPWIN 338 >gi|269862698|ref|XP_002650940.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220065381|gb|EED43116.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] Length = 332 Score = 40.0 bits (92), Expect = 0.099, Method: Compositional matrix adjust. Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 10/95 (10%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H + ++ EA +E + E++P +G+N Sbjct: 247 RDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMN 297 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96 QY++F+A+R +G + ++ + PF +M Sbjct: 298 CKLMCQYIEFVADRLLFALGEKKIYNVS-TPFDFM 331 >gi|254672337|emb|CBA05511.1| ribonucleoside-diphosphate reductase beta chain [Neisseria meningitidis alpha275] Length = 345 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++ + E Q + + +A E +A G Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL F+ +NP PW++ Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 345 >gi|319957101|ref|YP_004168364.1| ribonucleoside-diphosphate reductase [Nitratifractor salsuginis DSM 16511] gi|319419505|gb|ADV46615.1| Ribonucleoside-diphosphate reductase [Nitratifractor salsuginis DSM 16511] Length = 337 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 15/128 (11%) Query: 2 RDE-SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH---ETMPKGF 57 RDE + HL ++ I EN K+ M+ EA +E+ Y E P Sbjct: 210 RDEINTHLPLFANIFKTIYKENK--IPASIVDKAYEMIQEAVDIELEYGKYLLENYP--I 265 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID--LKK---EKNFFETR 112 +GL E+ + AN R ++IGLEP+F+ E P ++ ++++ LK NFFE+ Sbjct: 266 MGLTDELMEKTVYNYANDRLNKIGLEPIFE--ETPQTYLQKLVEKHLKMNDVRSNFFESN 323 Query: 113 VTEYQQGA 120 V Y + + Sbjct: 324 VANYAKNS 331 >gi|237808189|ref|YP_002892629.1| ribonucleotide-diphosphate reductase subunit beta [Tolumonas auensis DSM 9187] gi|237500450|gb|ACQ93043.1| ribonucleotide reductase [Tolumonas auensis DSM 9187] Length = 377 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKIEN--PHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ N P + +E + + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNILREGNDDPEMAEIARELHDECFALFKKAAEQEKEWASYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMS 97 +GLN QY++FI N R +GL F +NP PW++ Sbjct: 297 MLGLNKDILCQYVEFITNVRMQGVGLPLAFDADRQNPLPWIN 338 >gi|251792578|ref|YP_003007304.1| ribonucleoside-diphosphate reductase subunit beta [Aggregatibacter aphrophilus NJ8700] gi|247533971|gb|ACS97217.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter aphrophilus NJ8700] Length = 329 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 8/123 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60 ++E +H FGI + + ++ E P L+T F + + + +A E + G + L Sbjct: 198 KEEEIHGRFGITLYSILREEQPELFTDAFFTELKELADQAFTAEKEILNWIFEDGELDFL 257 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENP-----FPWMSEVIDLKKEKNFFETRVTE 115 + + E Y+ N +GLEP Y NP W I KE +FF R T+ Sbjct: 258 SKATVENYIANRYNNSLQALGLEP--AYNINPEQLKETEWFDIEILSTKETDFFNKRSTD 315 Query: 116 YQQ 118 Y + Sbjct: 316 YSK 318 >gi|296316020|ref|YP_003662484.1| ribonucleotide reductase subunit 2 [Bovine herpesvirus 5] gi|40456143|gb|AAR86121.1| UL40 ribonucleotide reductase small subunit [Bovine herpesvirus 5] Length = 315 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 15/120 (12%) Query: 2 RDESLHLNFGIDVINQ-IKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 RDE++H + N + E P + R + EA +E + P+G L Sbjct: 198 RDEAVHTTASCCIFNNYLGGERPP------PDRVRKLFREAVEIEREFIWSRAPRGSHIL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY----TENPFPWMSEVIDLKKEKNFFETRVTEY 116 + + Y+++ A+R I L PLF T+ P M+ +K NFFE R T Y Sbjct: 252 DVEAISAYVEYSADRLLAAIHLPPLFGTPPPGTDFPLALMTA----EKHTNFFERRSTTY 307 >gi|157955336|gb|ABW06046.1| NrdF [Bacillus thuringiensis serovar kurstaki] Length = 322 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 5/124 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E + +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSVEEQQEVQKETQELLMELSEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +++++ AN+ +GLEP F+ E NP D K +FF + Y + Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVKA 307 Query: 120 AELK 123 ++ Sbjct: 308 TNVE 311 >gi|38638230|ref|NP_944413.1| ribonucleotide reductase subunit 2 [Psittacid herpesvirus 1] gi|81987371|sp|Q6UDJ1|RIR2_PSHV1 RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|34500236|gb|AAQ73719.1| unknown [Psittacid herpesvirus 1] Length = 313 Score = 39.7 bits (91), Expect = 0.16, Method: Compositional matrix adjust. Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 10/119 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N +P K Q + EA +E + PK ++ Sbjct: 195 RDETIHTTASCCIYNNWLKGHPKPSVKRIHQ----LFKEAVEIECDFLVARAPKAARLID 250 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117 + + +++F ANR IG+ ++ ++P P + ++ L+K NFFE R T Y Sbjct: 251 IDAIQSFVRFTANRWLSMIGVPTIY---DDPAPDPTFPLALMSLEKNVNFFEHRSTAYS 306 >gi|182682906|ref|YP_001837030.1| putative aerobic ribonucleoside diphosphate reductase, small subunit [Enterobacteria phage EPS7] gi|182630618|gb|ACB97550.1| putative aerobic ribonucleoside diphosphate reductase, small subunit [Enterobacteria phage EPS7] Length = 381 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 4/104 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGL 60 +DE+LH +I + + E K+ T L + EI + H + +GL Sbjct: 237 KDEALHTQMSKAIIQIMFQQFDKDLVDEALAKAPTQLLKTLKTEIEWGHFIFKGRSLIGL 296 Query: 61 NAPSCEQYMQFIANRRCHQIGLE---PLFKYTENPFPWMSEVID 101 NA E+Y+ F+ IG+E L T+NP PW+ +D Sbjct: 297 NAELLEEYLYFVGRNAFMHIGVEWPSHLPVITKNPIPWIMNWLD 340 >gi|294338336|emb|CBJ94375.1| Probable ribonucleotide reductase (small subunit) [Campylobacter phage CPt10] Length = 369 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 10/124 (8%) Query: 2 RDESLHLNFGIDVINQIKIENP-----HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56 RDE+LHL ++I +I +P + W + L EA E + KG Sbjct: 226 RDENLHLAITQNLI-KILSRSPEEGFINAWNSIKDNITDRYL-EAADQEFKWIDYLFSKG 283 Query: 57 -FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRV 113 F+G+ + Y++++ N+R IG + +F + +NP PW+ I+ K + E+ + Sbjct: 284 AFLGMTPELAKNYIKYLINKRLKAIGFKEVFAGFNKNPIPWVETYINYDKNEVLPQESEI 343 Query: 114 TEYQ 117 T Y+ Sbjct: 344 TNYK 347 >gi|294338139|emb|CBJ93977.1| Probable ribonucleotide reductase (small subunit) [Campylobacter phage CP220] Length = 369 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 10/124 (8%) Query: 2 RDESLHLNFGIDVINQIKIENP-----HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56 RDE+LHL ++I +I +P + W + L EA E + KG Sbjct: 226 RDENLHLAITQNLI-KILSRSPEEGFINAWNSIKDNITDRYL-EAADQEFKWIDYLFSKG 283 Query: 57 -FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRV 113 F+G+ + Y++++ N+R IG + +F + +NP PW+ I+ K + E+ + Sbjct: 284 AFLGMTPELAKNYIKYLINKRLKAIGFKEVFAGFNKNPIPWVETYINYDKNEVLPQESEI 343 Query: 114 TEYQ 117 T Y+ Sbjct: 344 TNYK 347 >gi|254362523|ref|ZP_04978626.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia haemolytica PHL213] gi|153094123|gb|EDN75022.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia haemolytica PHL213] Length = 293 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 12/125 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60 ++E +H FGI + ++ E+ L+T EF + +T+ ++A E +G + + Sbjct: 162 KEEEIHGKFGIALYEILRDEHSELFTPEFFEDLQTLANQAFEAERGILDWIFEEGDLSFI 221 Query: 61 NAPSCEQYMQFIANRRCHQIGLEP-------LFKYTENPFPWMSEVIDLKKEKNFFETRV 113 + E Y++ N +GLEP L K TE W I KE +FF R Sbjct: 222 TKATVENYIKNRYNNSLSILGLEPPHDIDPELLKETE----WFDIEILSTKETDFFNKRS 277 Query: 114 TEYQQ 118 T+Y + Sbjct: 278 TDYSK 282 >gi|261494146|ref|ZP_05990649.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261310312|gb|EEY11512.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 325 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 12/125 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60 ++E +H FGI + ++ E+ L+T EF + +T+ ++A E +G + + Sbjct: 194 KEEEIHGKFGIALYEILRDEHSELFTPEFFEDLQTLANQAFEAERGILDWIFEEGDLSFI 253 Query: 61 NAPSCEQYMQFIANRRCHQIGLEP-------LFKYTENPFPWMSEVIDLKKEKNFFETRV 113 + E Y++ N +GLEP L K TE W I KE +FF R Sbjct: 254 TKATVENYIKNRYNNSLSILGLEPPHDIDPELLKETE----WFDIEILSTKETDFFNKRS 309 Query: 114 TEYQQ 118 T+Y + Sbjct: 310 TDYSK 314 >gi|132618|sp|P26713|RIR2_ASFM2 RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit Length = 327 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 11/120 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE---IAYAHETMPKGFV 58 RDE +H +F +I+ P ++ +L EA L I YA + Sbjct: 196 RDEGMHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFINYAFDKARGRVP 249 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117 G + QY+++ + C + + ++ NPFP M++ + EK NFFE R T+YQ Sbjct: 250 GFSKEMLFQYIRYFTDNLCFMMQCKSIYN-VGNPFPQMTKFFLNEVEKTNFFELRPTQYQ 308 >gi|53728876|ref|ZP_00348266.1| COG0208: Ribonucleotide reductase, beta subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207635|ref|YP_001052860.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus pleuropneumoniae L20] gi|165975603|ref|YP_001651196.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190149418|ref|YP_001967943.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303249851|ref|ZP_07336055.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303251971|ref|ZP_07338142.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247133|ref|ZP_07529185.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307249355|ref|ZP_07531349.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307251676|ref|ZP_07533581.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307253912|ref|ZP_07535764.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307256172|ref|ZP_07537959.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307258366|ref|ZP_07540107.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307260605|ref|ZP_07542297.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307262736|ref|ZP_07544363.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|126096427|gb|ABN73255.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165875704|gb|ABY68752.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189914549|gb|ACE60801.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302649401|gb|EFL79586.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302651418|gb|EFL81570.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306856382|gb|EFM88533.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306858649|gb|EFM90711.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306860873|gb|EFM92881.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306863116|gb|EFM95058.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865353|gb|EFM97249.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306867550|gb|EFM99397.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306869682|gb|EFN01467.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306871881|gb|EFN03598.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 325 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 8/123 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60 ++E +H FGI + ++ E+ L+T EF + +T+ +A E +G + + Sbjct: 194 KEEEIHGKFGIALYEILREEHSELFTPEFFEDLKTLSSQAFEAECGILDWIFEEGDLSFI 253 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENP-----FPWMSEVIDLKKEKNFFETRVTE 115 + E Y++ N +GLEP Y NP W I KE +FF R T+ Sbjct: 254 SREEVENYIRSRYNNSLMTLGLEP--PYDVNPELLKETEWFDIEILSTKETDFFNKRSTD 311 Query: 116 YQQ 118 Y + Sbjct: 312 YSK 314 >gi|238897538|ref|YP_002923217.1| ribonucleoside-diphosphate reductase 1, beta subunit [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465295|gb|ACQ67069.1| ribonucleoside-diphosphate reductase 1, beta subunit [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 376 Score = 39.3 bits (90), Expect = 0.21, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 7/102 (6%) Query: 2 RDESLHL---NFGIDVINQIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56 RDE+LHL +D++ K ++P + +E QQ+ + A E +A G Sbjct: 237 RDEALHLMGTQHMLDLMRSGK-DDPEMADIAQECQQECSDLFLLAAQQEKEWAAYLFRDG 295 Query: 57 -FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY++++ N R + L+ F NP PW++ Sbjct: 296 SMIGLNQDILCQYIEYMTNIRMQAVKLDAPFSIRTNPIPWIN 337 >gi|255683173|ref|YP_003084381.1| UL40 [Duck enteritis virus] gi|158343199|gb|ABW35292.1| ribonucleotide reductase subunit 2 [Anatid herpesvirus 1] gi|208401182|gb|ACI26683.1| UL40 [Anatid herpesvirus 1] gi|254839988|gb|ACT83534.1| UL40 [Anatid herpesvirus 1] Length = 355 Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust. Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 8/117 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59 RDE++H + N+ HL + K + + EA LE + P Sbjct: 237 RDETIHTKASCVIYNK------HLQKYKKPSTCRIYKLFSEAVKLECEFLRARAPSDSAI 290 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 ++ + Y++F A+R IGL PLF + + ++ NFFE R T Y Sbjct: 291 IDTEAICSYVRFNADRLLSDIGLAPLFDEPPPKHDFPLAFMATSQQTNFFERRNTTY 347 >gi|152991848|ref|YP_001357569.1| ribonucleoside-diphosphate reductase, beta subunit [Sulfurovum sp. NBC37-1] gi|151423709|dbj|BAF71212.1| ribonucleoside-diphosphate reductase, beta subunit [Sulfurovum sp. NBC37-1] Length = 337 Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust. Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 11/126 (8%) Query: 2 RDE-SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59 RDE + HL ++ I+ EN ++ T + M+ +A +E+ Y H + + +G Sbjct: 210 RDELNTHLPLFANIFKTIQKEN-NIATSTIDAAYK-MIQDAVKIELEYGHYLLDQFPIMG 267 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-----KNFFETRVT 114 + EQ + AN R +IGL+P+F E+ ++ +++ E NFFE+ V+ Sbjct: 268 VTHELMEQTVYNYANDRLKKIGLDPIFD--ESATTYLQKLVTKHLEMNEVKSNFFESNVS 325 Query: 115 EYQQGA 120 Y + + Sbjct: 326 NYAKSS 331 >gi|218233288|ref|YP_002366135.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus B4264] gi|229149653|ref|ZP_04277884.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus m1550] gi|157955328|gb|ABW06040.1| NrdF [Bacillus thuringiensis serovar entomocidus] gi|157955388|gb|ABW06085.1| NrdF [Bacillus thuringiensis serovar subtoxicus] gi|157955409|gb|ABW06101.1| NrdF [Bacillus cereus] gi|218161245|gb|ACK61237.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus B4264] gi|228633863|gb|EEK90461.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus m1550] Length = 322 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQDLLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP D K +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304 >gi|94676795|ref|YP_588829.1| ribonucleotide-diphosphate reductase subunit beta [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219945|gb|ABF14104.1| ribonucleoside-diphosphate reductase, beta subunit [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 376 Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 5/101 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N +++ ++P + E Q S + A E +A G Sbjct: 237 RDEALHLAGTQHMLNLMRLGKDDPEMADIALECQHDSYHLFLXAANQEKDWASYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R + L+ F NP PW++ Sbjct: 297 MIGLNEEILCQYIEYITNIRMQAVLLDLPFATRSNPIPWIN 337 >gi|229189534|ref|ZP_04316550.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus ATCC 10876] gi|228593979|gb|EEK51782.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus ATCC 10876] Length = 322 Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAKEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP D K +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304 >gi|228990454|ref|ZP_04150419.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus pseudomycoides DSM 12442] gi|228996556|ref|ZP_04156195.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides Rock3-17] gi|229004206|ref|ZP_04162007.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides Rock1-4] gi|228757067|gb|EEM06311.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides Rock1-4] gi|228763188|gb|EEM12096.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides Rock3-17] gi|228768980|gb|EEM17578.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus pseudomycoides DSM 12442] Length = 322 Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAEFSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP D K +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPRFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304 >gi|312130784|ref|YP_003998124.1| ribonucleotide reductase [Leadbetterella byssophila DSM 17132] gi|311907330|gb|ADQ17771.1| ribonucleotide reductase [Leadbetterella byssophila DSM 17132] Length = 324 Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust. Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 4/120 (3%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LN 61 DE +H N GI ++N I+ E P + E + + E+ +E +G + + Sbjct: 194 DEQIHANGGIYIVNTIRDEFPDFFDPETITQIEDTVRESIEVEERILDWIFSEGEIEIIK 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +M+F + +IG PLF + P W E + +FF R +Y + Sbjct: 254 KKDLLNFMKFRIDDSMKKIGFSPLFHVSSADYQPIAWFEEEVFANSLDDFFAKRPVDYTK 313 >gi|213420352|ref|ZP_03353418.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 88 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 15/42 (35%), Positives = 24/42 (57%) Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 8 SMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 49 >gi|213855386|ref|ZP_03383626.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 80 Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 24/41 (58%) Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 1 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 41 >gi|228907084|ref|ZP_04070948.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis IBL 200] gi|157955401|gb|ABW06095.1| NrdF [Bacillus thuringiensis serovar toumanoffi] gi|228852588|gb|EEM97378.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis IBL 200] Length = 322 Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP D K +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304 >gi|228938567|ref|ZP_04101175.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971446|ref|ZP_04132072.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978059|ref|ZP_04138438.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis Bt407] gi|157955340|gb|ABW06049.1| NrdF [Bacillus thuringiensis serovar thuringiensis] gi|157955368|gb|ABW06070.1| NrdF [Bacillus thuringiensis serovar galechiae] gi|157955384|gb|ABW06082.1| NrdF [Bacillus thuringiensis serovar sotto] gi|228781720|gb|EEM29919.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis Bt407] gi|228788313|gb|EEM36266.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821165|gb|EEM67182.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326939076|gb|AEA14972.1| ribonucleotide-diphosphate reductase [Bacillus thuringiensis serovar chinensis CT-43] Length = 322 Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP D K +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304 >gi|75759355|ref|ZP_00739452.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218896385|ref|YP_002444796.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus G9842] gi|228900033|ref|ZP_04064269.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis IBL 4222] gi|228920164|ref|ZP_04083513.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228964415|ref|ZP_04125529.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar sotto str. T04001] gi|74493187|gb|EAO56306.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|157955348|gb|ABW06055.1| NrdF [Bacillus thuringiensis serovar alesti] gi|157955356|gb|ABW06061.1| NrdF [Bacillus thuringiensis serovar dakota] gi|157955360|gb|ABW06064.1| NrdF [Bacillus thuringiensis serovar darmstadiensis] gi|157955364|gb|ABW06067.1| NrdF [Bacillus thuringiensis serovar dendrolimus] gi|157955380|gb|ABW06079.1| NrdF [Bacillus thuringiensis serovar ostriniae] gi|218545942|gb|ACK98336.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus G9842] gi|228795272|gb|EEM42764.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar sotto str. T04001] gi|228839620|gb|EEM84912.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228859647|gb|EEN04071.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis IBL 4222] Length = 322 Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP D K +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304 >gi|229177859|ref|ZP_04305232.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus 172560W] gi|228605650|gb|EEK63098.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus 172560W] Length = 322 Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP D K +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304 >gi|229057079|ref|ZP_04196471.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus AH603] gi|228720220|gb|EEL71799.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus AH603] Length = 322 Score = 38.9 bits (89), Expect = 0.27, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 5/124 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q +++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFTELSAKEQQEVQTETQELLMELYEIELAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +++++ AN+ +GLEP F+ E NP D K +FF + Y + Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVKA 307 Query: 120 AELK 123 ++ Sbjct: 308 TNVE 311 >gi|157955376|gb|ABW06076.1| NrdF [Bacillus thuringiensis serovar morrisoni] Length = 322 Score = 38.9 bits (89), Expect = 0.27, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 5/124 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +++++ AN+ +GLEP F+ E NP D K +FF + Y + Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVKA 307 Query: 120 AELK 123 ++ Sbjct: 308 TNVE 311 >gi|213581345|ref|ZP_03363171.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 90 Score = 38.9 bits (89), Expect = 0.27, Method: Compositional matrix adjust. Identities = 15/42 (35%), Positives = 24/42 (57%) Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 10 SMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 51 >gi|330004285|ref|ZP_08304843.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp. MS 92-3] gi|328536657|gb|EGF62979.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp. MS 92-3] Length = 380 Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust. Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 8/103 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIA-----YAHETMPKG 56 RDE+LH ++ ++ L K+ ++ +++ T+L++A +A G Sbjct: 239 RDEALHCEGTERMLRNMRNGREGLLWKQIAEEEEPFVYQ-TMLDVAEQEMRWADYLFKDG 297 Query: 57 -FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97 +GLNA +QY+++ N ++ L PLF T +P PWM+ Sbjct: 298 SMIGLNAKILKQYVKYRTNLAMKRLHLNPLFDDVTFDPLPWMN 340 >gi|307244959|ref|ZP_07527056.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306854124|gb|EFM86332.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 325 Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust. Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 8/123 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60 ++E +H FGI + ++ E+ L+T EF + +T+ +A E +G + + Sbjct: 194 KEEEIHGKFGIVLYEILREEHSELFTPEFFEDLKTLSSQAFEAECGILDWIFEEGDLSFI 253 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENP-----FPWMSEVIDLKKEKNFFETRVTE 115 + E Y++ N +GLEP Y NP W I KE +FF R T+ Sbjct: 254 SREEVENYIRSRYNNSLMTLGLEP--PYDVNPELLKETEWFDIEILSTKETDFFNKRSTD 311 Query: 116 YQQ 118 Y + Sbjct: 312 YSK 314 >gi|30019505|ref|NP_831136.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus ATCC 14579] gi|229043194|ref|ZP_04190917.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus AH676] gi|229078637|ref|ZP_04211194.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus Rock4-2] gi|229108909|ref|ZP_04238513.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus Rock1-15] gi|229126769|ref|ZP_04255781.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus BDRD-Cer4] gi|229144056|ref|ZP_04272472.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus BDRD-ST24] gi|296502033|ref|YP_003663733.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus thuringiensis BMB171] gi|29895049|gb|AAP08337.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus ATCC 14579] gi|157955310|gb|ABW06026.1| NrdF [Bacillus thuringiensis serovar canadensis] gi|157955392|gb|ABW06088.1| NrdF [Bacillus thuringiensis serovar thompsoni] gi|157955396|gb|ABW06091.1| NrdF [Bacillus thuringiensis serovar tohokuensis] gi|228639453|gb|EEK95867.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus BDRD-ST24] gi|228656709|gb|EEL12535.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus BDRD-Cer4] gi|228674565|gb|EEL29805.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus Rock1-15] gi|228704707|gb|EEL57136.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus Rock4-2] gi|228726156|gb|EEL77390.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus AH676] gi|296323085|gb|ADH06013.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus thuringiensis BMB171] Length = 322 Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP D K +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304 >gi|304373620|ref|YP_003858365.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB16] gi|299829576|gb|ADJ55369.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB16] Length = 391 Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 5/102 (4%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHLWTKEFQ--QKSRTMLHEATLLEIAYAHETMPKGF 57 RDE+LH I Q+ ++P + FQ +++ + E E +A G Sbjct: 249 RDEALHQKGTQSKIRLWQMGKDDPEMAEIAFQYEEEATQIFLEVYEQEKEWAEHLFSIGD 308 Query: 58 V-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE 98 V G++ S Y++ + ++R +GL+ FK + NP+PWM++ Sbjct: 309 VDGVSLKSTIAYIEHLTDQRMRAVGLQSPFKPSPNPYPWMNK 350 >gi|148653376|ref|YP_001280469.1| ribonucleotide-diphosphate reductase subunit beta [Psychrobacter sp. PRwf-1] gi|148572460|gb|ABQ94519.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Psychrobacter sp. PRwf-1] Length = 377 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN + ++P + + + +S + +A E +A G Sbjct: 237 RDEALHLTSTQHMINIMASGKDDPEMAEISAQCHNESIEIFRKAAEQEKEWAGYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS 97 +GLN QY+++I N R +GL +F ++ NP PW++ Sbjct: 297 MIGLNKDILCQYVEYITNLRMEAVGLPGIFPESKSNPIPWIN 338 >gi|157955319|gb|ABW06033.1| NrdF [Bacillus thuringiensis serovar pakistani] Length = 322 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 5/124 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSTEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +++++ AN+ +GLEP F+ E NP D K +FF + Y + Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVKA 307 Query: 120 AELK 123 ++ Sbjct: 308 TNVE 311 >gi|229084444|ref|ZP_04216723.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus Rock3-44] gi|228698872|gb|EEL51578.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus Rock3-44] Length = 322 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTDEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP D K +FF + Y Sbjct: 250 -VEEVNRFVRYNANKGLMNLGLEPRFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304 >gi|146329200|ref|YP_001209518.1| ribonucleotide reductase, beta subunit [Dichelobacter nodosus VCS1703A] gi|146232670|gb|ABQ13648.1| ribonucleotide reductase, beta subunit [Dichelobacter nodosus VCS1703A] Length = 325 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 4/121 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60 ++E +H FGI + + IK E+P L+T F +T+ +A E + G + L Sbjct: 194 KEEEIHGRFGIALYHIIKEEHPDLFTDSFYHHLKTLADQALAAERGILNWIFENGDLPFL 253 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117 + E Y+ N +G+E + E W I KE +FF R T+Y Sbjct: 254 QQKTVENYIVNRYNNSLSVLGIESPYTVDEERLKETQWFDIEILSGKENDFFYKRSTDYS 313 Query: 118 Q 118 + Sbjct: 314 K 314 >gi|30261453|ref|NP_843830.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus anthracis str. Ames] gi|47526645|ref|YP_017994.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus anthracis str. 'Ames Ancestor'] gi|49184287|ref|YP_027539.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus anthracis str. Sterne] gi|49477196|ref|YP_035577.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus thuringiensis serovar konkukian str. 97-27] gi|65318723|ref|ZP_00391682.1| COG0208: Ribonucleotide reductase, beta subunit [Bacillus anthracis str. A2012] gi|118476922|ref|YP_894073.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus thuringiensis str. Al Hakam] gi|165870361|ref|ZP_02215016.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. A0488] gi|167634337|ref|ZP_02392658.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. A0442] gi|167639338|ref|ZP_02397610.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. A0193] gi|170686782|ref|ZP_02878002.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. A0465] gi|170706310|ref|ZP_02896771.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. A0389] gi|177651561|ref|ZP_02934350.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. A0174] gi|190568085|ref|ZP_03020995.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis Tsiankovskii-I] gi|196035278|ref|ZP_03102683.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus W] gi|196046555|ref|ZP_03113780.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus 03BB108] gi|218902561|ref|YP_002450395.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus AH820] gi|225863317|ref|YP_002748695.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus 03BB102] gi|227815798|ref|YP_002815807.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. CDC 684] gi|228914025|ref|ZP_04077647.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228932735|ref|ZP_04095607.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228945050|ref|ZP_04107411.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229090407|ref|ZP_04221650.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus Rock3-42] gi|229120993|ref|ZP_04250235.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus 95/8201] gi|229183646|ref|ZP_04310869.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus BGSC 6E1] gi|229602752|ref|YP_002865867.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. A0248] gi|254682483|ref|ZP_05146344.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus anthracis str. CNEVA-9066] gi|254726146|ref|ZP_05187928.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus anthracis str. A1055] gi|254733899|ref|ZP_05191613.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus anthracis str. Western North America USA6153] gi|254740411|ref|ZP_05198102.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus anthracis str. Kruger B] gi|254753802|ref|ZP_05205837.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus anthracis str. Vollum] gi|254758897|ref|ZP_05210924.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus anthracis str. Australia 94] gi|301052993|ref|YP_003791204.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus anthracis CI] gi|30255307|gb|AAP25316.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. Ames] gi|47501793|gb|AAT30469.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. 'Ames Ancestor'] gi|49178214|gb|AAT53590.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. Sterne] gi|49328752|gb|AAT59398.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus thuringiensis serovar konkukian str. 97-27] gi|72414680|emb|CAG28950.1| ribonucleoside-diphosphate reductase class Ib beta chain [Bacillus anthracis] gi|118416147|gb|ABK84566.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Bacillus thuringiensis str. Al Hakam] gi|157955314|gb|ABW06029.1| NrdF [Bacillus thuringiensis serovar finitimus] gi|164713856|gb|EDR19378.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. A0488] gi|167512777|gb|EDR88151.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. A0193] gi|167530225|gb|EDR92951.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. A0442] gi|170128844|gb|EDS97710.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. A0389] gi|170669305|gb|EDT20048.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. A0465] gi|172082839|gb|EDT67902.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. A0174] gi|190560819|gb|EDV14794.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis Tsiankovskii-I] gi|195991955|gb|EDX55918.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus W] gi|196022739|gb|EDX61421.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus 03BB108] gi|218537212|gb|ACK89610.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus AH820] gi|225785957|gb|ACO26174.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus 03BB102] gi|227004217|gb|ACP13960.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. CDC 684] gi|228599889|gb|EEK57486.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus BGSC 6E1] gi|228662653|gb|EEL18251.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus 95/8201] gi|228692990|gb|EEL46708.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus Rock3-42] gi|228814719|gb|EEM60979.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228826940|gb|EEM72702.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228845630|gb|EEM90659.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229267160|gb|ACQ48797.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. A0248] gi|300375162|gb|ADK04066.1| ribonucleotide-diphosphate reductase beta subunit [Bacillus cereus biovar anthracis str. CI] gi|324325470|gb|ADY20730.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus thuringiensis serovar finitimus YBT-020] Length = 322 Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 5/124 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +++++ AN+ +GLEP F+ E NP D K +FF + Y + Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVKA 307 Query: 120 AELK 123 ++ Sbjct: 308 TNVE 311 >gi|163939261|ref|YP_001644145.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus weihenstephanensis KBAB4] gi|229010750|ref|ZP_04167947.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides DSM 2048] gi|229132251|ref|ZP_04261107.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus BDRD-ST196] gi|229166287|ref|ZP_04294046.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus AH621] gi|163861458|gb|ABY42517.1| Ribonucleoside-diphosphate reductase [Bacillus weihenstephanensis KBAB4] gi|228617232|gb|EEK74298.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus AH621] gi|228651189|gb|EEL07168.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus BDRD-ST196] gi|228750424|gb|EEM00253.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides DSM 2048] Length = 322 Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 5/124 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q +++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFTELSAEEQQEVQTETQELLMELYEIELAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +++++ AN+ +GLEP F+ E NP D K +FF + Y + Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVKA 307 Query: 120 AELK 123 ++ Sbjct: 308 TNVE 311 >gi|193206379|ref|NP_500944.2| hypothetical protein F58F9.1 [Caenorhabditis elegans] Length = 581 Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust. Identities = 20/73 (27%), Positives = 43/73 (58%), Gaps = 2/73 (2%) Query: 37 MLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96 +++E+ L+E + E++P +G+N +Y++F+A+ ++G + T+N F +M Sbjct: 511 IINESVLVEQDFVRESLPTNLIGMNQHMMCKYVEFVADLLLEELGYSKRYN-TKNLFDFM 569 Query: 97 SEVIDLKKEKNFF 109 E I ++ + NFF Sbjct: 570 -ENISIEGKTNFF 581 >gi|47566242|ref|ZP_00237270.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus G9241] gi|47556795|gb|EAL15126.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus G9241] Length = 322 Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP D K +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304 >gi|302321458|gb|ADL16651.1| RNR2 [Abalone herpesvirus Victoria/AUS/2007] Length = 642 Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 62/121 (51%), Gaps = 14/121 (11%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DE+LH +F + N + + +K + ++ +A +EIA+A + + +N Sbjct: 249 DETLHGSFYAALHNIMP-------DRASPEKVKEIIVKAVEIEIAFAMSIVTEDLEHINP 301 Query: 63 PSCEQYMQFIANRRCHQIGLEPLF--KYTE----NPFPWMSEVIDLKKEKNFFETRVTEY 116 S + +++ AN C +G+EP++ ++T+ +P +M+ L+K NFFE R +Y Sbjct: 302 SSMQLHIKATANLCCEFLGVEPIYFDRWTKLPVVSPLSYMNNYETLQK-FNFFEVRNMDY 360 Query: 117 Q 117 Sbjct: 361 S 361 >gi|52143985|ref|YP_082843.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus E33L] gi|228984529|ref|ZP_04144706.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229155020|ref|ZP_04283134.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus ATCC 4342] gi|51977454|gb|AAU19004.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus E33L] gi|157955324|gb|ABW06037.1| NrdF [Bacillus thuringiensis serovar tochigiensis] gi|228628578|gb|EEK85291.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus ATCC 4342] gi|228775232|gb|EEM23621.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 322 Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP D K +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304 >gi|42780545|ref|NP_977792.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus ATCC 10987] gi|42736465|gb|AAS40400.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus ATCC 10987] Length = 322 Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 5/124 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +++++ AN+ +GLEP F+ E NP D K +FF + Y + Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVKA 307 Query: 120 AELK 123 ++ Sbjct: 308 TNVE 311 >gi|229102053|ref|ZP_04232765.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus Rock3-28] gi|228681373|gb|EEL35538.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus Rock3-28] Length = 322 Score = 38.5 bits (88), Expect = 0.35, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + Q+ E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQLFAELSAEDQQEVQKETQVLLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP D K +FF + Y Sbjct: 250 -VDDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304 >gi|157955305|gb|ABW06022.1| NrdF [Bacillus thuringiensis serovar aizawai] gi|157955352|gb|ABW06058.1| NrdF [Bacillus thuringiensis serovar colmeri] gi|157955372|gb|ABW06073.1| NrdF [Bacillus thuringiensis serovar indiana] gi|157955405|gb|ABW06098.1| NrdF [Bacillus thuringiensis serovar wuhanensis] Length = 322 Score = 38.1 bits (87), Expect = 0.38, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 5/124 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSVEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +++++ AN+ +GLEP F+ E NP D K +FF + Y + Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVKA 307 Query: 120 AELK 123 ++ Sbjct: 308 TNVE 311 >gi|157955332|gb|ABW06043.1| NrdF [Bacillus thuringiensis serovar galleriae] gi|157955344|gb|ABW06052.1| NrdF [Bacillus thuringiensis serovar tolworthi] Length = 322 Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 5/124 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSVEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +++++ AN+ +GLEP F+ E NP D K +FF + Y + Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVKA 307 Query: 120 AELK 123 ++ Sbjct: 308 TNVE 311 >gi|212712302|ref|ZP_03320430.1| hypothetical protein PROVALCAL_03388 [Providencia alcalifaciens DSM 30120] gi|212685048|gb|EEB44576.1| hypothetical protein PROVALCAL_03388 [Providencia alcalifaciens DSM 30120] Length = 380 Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust. Identities = 15/42 (35%), Positives = 24/42 (57%) Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 +GLN QY+++I N R +GL+ F+ NP PW++ Sbjct: 300 SMIGLNKDILCQYVEYITNIRMQAVGLKLPFEARSNPIPWIN 341 >gi|152974880|ref|YP_001374397.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023632|gb|ABS21402.1| Ribonucleoside-diphosphate reductase [Bacillus cytotoxicus NVH 391-98] Length = 322 Score = 38.1 bits (87), Expect = 0.42, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 7/118 (5%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59 +RDES+H F + QI E ++ Q++++ +L E +E AY E G VG Sbjct: 192 IRDESIHGVFVGLLAQQIFAELSAEEQEDVQKETQDLLMELYEIETAYTEEIYASIGLVG 251 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP D K +FF + Y Sbjct: 252 ----EVNRFVRYNANKGLMNLGLEPRFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304 >gi|255535950|ref|YP_003096321.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Flavobacteriaceae bacterium 3519-10] gi|255342146|gb|ACU08259.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Flavobacteriaceae bacterium 3519-10] Length = 324 Score = 38.1 bits (87), Expect = 0.43, Method: Compositional matrix adjust. Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 4/120 (3%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GLN 61 DE +H N GI +IN+I+ E P L T + T++ + LE G + ++ Sbjct: 194 DEQIHANAGIYLINKIREEQPDLLTDSDIEDIYTLVDHSIELEAEILDWIFEMGEIDNVS 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + +M++ + +IG++ + + + P W E + +FF R +Y + Sbjct: 254 KENLLNFMKYRVDDSLKKIGMQTRYNVSGDEYRPMVWFEEEVFANSMDDFFAKRPVDYTK 313 >gi|307171465|gb|EFN63309.1| Ribonucleoside-diphosphate reductase subunit M2 [Camponotus floridanus] Length = 343 Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust. Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 7/82 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + I ++ P ++ ++++ +A +E + + +P +G+N Sbjct: 243 RDEGLHCDFACLMFKHI-VQKPSF------ERVKSIIMDAVEIEQEFLTQALPVQLIGMN 295 Query: 62 APSCEQYMQFIANRRCHQIGLE 83 Y++F+A+R +G E Sbjct: 296 CTLMCSYIEFVADRLFVALGFE 317 >gi|294669616|ref|ZP_06734683.1| hypothetical protein NEIELOOT_01517 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308529|gb|EFE49772.1| hypothetical protein NEIELOOT_01517 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 81 Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97 +GLN QY+++I N R +GL F+ T+NP PW++ Sbjct: 1 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWIN 42 >gi|229172094|ref|ZP_04299659.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus MM3] gi|228611437|gb|EEK68694.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus MM3] Length = 133 Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 5/117 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 ++DES+H F + Q+ +E +E Q++++ +L E +E+AY E +GL Sbjct: 3 VKDESIHGVFVGILAQQLFVELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 60 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP D K +FF + Y Sbjct: 61 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTDTKN-HDFFSVKGNGY 115 >gi|167856024|ref|ZP_02478769.1| ribonucleotide-diphosphate reductase subunit alpha [Haemophilus parasuis 29755] gi|219871494|ref|YP_002475869.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus parasuis SH0165] gi|167852863|gb|EDS24132.1| ribonucleotide-diphosphate reductase subunit alpha [Haemophilus parasuis 29755] gi|219691698|gb|ACL32921.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus parasuis SH0165] Length = 325 Score = 37.7 bits (86), Expect = 0.47, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 12/125 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60 ++E +H FGI + + E+ L+T EF ++ +T+ +A E +G + + Sbjct: 194 KEEEIHGRFGIALYEILSDEHSELFTPEFFEELKTLSQQAFEAERGILDWIFEEGDLSFI 253 Query: 61 NAPSCEQYMQFIANRRCHQIGLEP-------LFKYTENPFPWMSEVIDLKKEKNFFETRV 113 + + E Y+ N +GLEP L K TE W I KE +FF R Sbjct: 254 SRKTVENYIMNRYNNSLSILGLEPPYDVDPELLKETE----WFDIEIISTKETDFFNKRS 309 Query: 114 TEYQQ 118 T+Y + Sbjct: 310 TDYSK 314 >gi|30984468|ref|NP_851900.1| ribonucleotide reductase subunit 2 [Macacine herpesvirus 1] gi|28804676|dbj|BAC58080.1| ribonucleotide reductase small subunit [Cercopithecine herpesvirus 1] gi|30844282|gb|AAP41458.1| small subunit of ribonucleotide reductase [Macacine herpesvirus 1] Length = 338 Score = 37.7 bits (86), Expect = 0.49, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 11/120 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59 RDE++H I N +L K ++ + EA +EI + P Sbjct: 217 RDEAVH------TTASCYIYNNYLGGHRKPTAERVYRLFREAVDIEIGFIRSQAPANSRV 270 Query: 60 LNAPS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 L+A + E Y++F A+R I ++PLF + ++ +K NFFE R T Y Sbjct: 271 LDAAALDAIENYVRFSADRLLVLIKMKPLFGAPAPAPSFPLSLMSTEKHTNFFECRSTAY 330 >gi|261496013|ref|ZP_05992423.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308263|gb|EEY09556.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia haemolytica serotype A2 str. OVINE] Length = 325 Score = 37.7 bits (86), Expect = 0.51, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 12/125 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60 ++E +H FGI + ++ E+ L+T EF + +T+ ++A E +G + + Sbjct: 194 KEEEIHGKFGIALYEILRDEHSELFTPEFFEDLQTLANQAFEAERGILDWIFEEGDLSFI 253 Query: 61 NAPSCEQYMQFIANRRCHQIGLEP-------LFKYTENPFPWMSEVIDLKKEKNFFETRV 113 + E Y++ N +GLEP K TE W I KE +FF R Sbjct: 254 TKATVENYIKNRYNNSLSILGLEPPHDIDPEFLKETE----WFDIEILSTKETDFFNKRS 309 Query: 114 TEYQQ 118 T+Y + Sbjct: 310 TDYSK 314 >gi|149369595|ref|ZP_01889447.1| ribonucleoside-diphosphate reductase, beta subunit [unidentified eubacterium SCB49] gi|149357022|gb|EDM45577.1| ribonucleoside-diphosphate reductase, beta subunit [unidentified eubacterium SCB49] Length = 424 Score = 37.7 bits (86), Expect = 0.52, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 4/121 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60 ++E +H +FGID+I +K E+P +T E+ + + + +A E+ +G + L Sbjct: 293 KEEQIHGDFGIDLILILKDEHPEWFTPEYHENIKRLCLDAYEAEVDLVDWIFEEGELDFL 352 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQ 117 ++++ N+ IG+E +F E W + I K +FF R Y Sbjct: 353 PKTVINEFLKNRFNKSLESIGVEKVFDVDEALVIQTEWFDDEIIGTKHGDFFVKRSVNYS 412 Query: 118 Q 118 + Sbjct: 413 K 413 >gi|46401830|ref|YP_006922.1| putative aerobic ribonucleoside diphosphate reductase, small subunit [Enterobacteria phage T5] gi|45775008|gb|AAS77140.1| putative aerobic ribonucleoside diphosphate reductase, small subunit [Enterobacteria phage T5] gi|51512032|gb|AAU05231.1| ribonucleotide reductase beta subunit [Enterobacteria phage T5] gi|59897231|gb|AAX12026.1| ribonucleoside diphosphate reductase I beta chain [Enterobacteria phage T5] Length = 381 Score = 37.7 bits (86), Expect = 0.54, Method: Compositional matrix adjust. Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 4/104 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGL 60 +DE+LH +I + + E K+ L + EI + H + +GL Sbjct: 237 KDEALHTQMSKAIIQIMFQQFDKDLVDEAVAKAPAQLLKTLKTEIEWGHFIFKGRSLIGL 296 Query: 61 NAPSCEQYMQFIANRRCHQIGLE---PLFKYTENPFPWMSEVID 101 NA E+Y+ F+ IG+E L T+NP PW+ +D Sbjct: 297 NAELLEEYLYFVGRNAFMHIGVEWPSHLPVITKNPIPWIMNWLD 340 >gi|229029125|ref|ZP_04185222.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus AH1271] gi|228732183|gb|EEL83068.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus AH1271] Length = 322 Score = 37.7 bits (86), Expect = 0.56, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 5/124 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + Q+ E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQLFTELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +++++ AN+ +GLEP F+ E NP D K +FF + Y + Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVKA 307 Query: 120 AELK 123 ++ Sbjct: 308 TNVE 311 >gi|229095937|ref|ZP_04226913.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus Rock3-29] gi|229114891|ref|ZP_04244304.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus Rock1-3] gi|228668583|gb|EEL24012.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus Rock1-3] gi|228687447|gb|EEL41349.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus Rock3-29] Length = 322 Score = 37.7 bits (86), Expect = 0.60, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + Q+ E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQLFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP D K +FF + Y Sbjct: 250 -VDDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304 >gi|325955614|ref|YP_004239274.1| ribonucleotide reductase [Weeksella virosa DSM 16922] gi|323438232|gb|ADX68696.1| ribonucleotide reductase [Weeksella virosa DSM 16922] Length = 324 Score = 37.4 bits (85), Expect = 0.63, Method: Compositional matrix adjust. Identities = 26/120 (21%), Positives = 53/120 (44%), Gaps = 4/120 (3%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GLN 61 DE +H N GI ++N+IK E P +++E Q+ + ++ + +E +G + + Sbjct: 194 DEQIHANAGIYIVNKIKEEFPDFFSEETIQEIKNVVTHSIEVESQILDWIFEQGEIETIK 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +M++ + +IG ++ T P W E + +FF R +Y + Sbjct: 254 KKDLLNFMKYRVDESMLKIGFGKIYNITAEQYQPMVWFEEEVFANSLDDFFAKRPVDYTK 313 >gi|229160405|ref|ZP_04288403.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus R309803] gi|228623129|gb|EEK79957.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus R309803] Length = 322 Score = 37.4 bits (85), Expect = 0.67, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + Q+ E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQLFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP D K +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304 >gi|66391516|ref|YP_239041.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB43] gi|62288604|gb|AAX78587.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB43] Length = 391 Score = 37.4 bits (85), Expect = 0.68, Method: Compositional matrix adjust. Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 5/102 (4%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKGF 57 RDE+LH I Q+ ++P + ++++++ + E E +A G Sbjct: 249 RDEALHQKGTQSKIRLWQMGKDDPEMAEIAYQYEEEATQIFLEVYEQEKEWAEHLFSIGD 308 Query: 58 V-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE 98 V G+ S Y++ + ++R +GL+ FK + NP+PWM++ Sbjct: 309 VDGVTLKSTIAYIEHLTDQRMRAVGLQSPFKPSPNPYPWMNK 350 >gi|228957728|ref|ZP_04119472.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus thuringiensis serovar pakistani str. T13001] gi|228801971|gb|EEM48844.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus thuringiensis serovar pakistani str. T13001] Length = 133 Score = 37.4 bits (85), Expect = 0.68, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 ++DES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 3 VKDESIHGVFVGILAQQIFAELSTEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 60 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP D K +FF + Y Sbjct: 61 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTDTKN-HDFFSVKGNGY 115 >gi|196040733|ref|ZP_03108032.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus NVH0597-99] gi|206977638|ref|ZP_03238531.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus H3081.97] gi|217958931|ref|YP_002337479.1| ribonucleoside-diphosphate reductase, subunit beta [Bacillus cereus AH187] gi|222095088|ref|YP_002529148.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus Q1] gi|229138142|ref|ZP_04266740.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus BDRD-ST26] gi|229195652|ref|ZP_04322418.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus m1293] gi|196028523|gb|EDX67131.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus NVH0597-99] gi|206744211|gb|EDZ55625.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus H3081.97] gi|217064629|gb|ACJ78879.1| ribonucleoside-diphosphate reductase, subunit beta [Bacillus cereus AH187] gi|221239146|gb|ACM11856.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus Q1] gi|228587901|gb|EEK45953.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus m1293] gi|228645487|gb|EEL01721.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus BDRD-ST26] Length = 133 Score = 37.4 bits (85), Expect = 0.71, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 ++DES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 3 VKDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 60 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP D K +FF + Y Sbjct: 61 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTDTKN-HDFFSVKGNGY 115 >gi|216905873|ref|YP_002333501.1| ribonucleotide reductase subunit 2 [Equid herpesvirus 9] gi|216410027|dbj|BAH02445.1| small subunit of ribonucleotide reductase [Equid herpesvirus 9] Length = 321 Score = 37.4 bits (85), Expect = 0.73, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 16/122 (13%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT--MLHEATLLEIAYAHETMPKGFVG 59 RDE++H I N +L E + R + EA +E + P+ Sbjct: 203 RDEAIHTR------ASCCIYNNYLGGFEKPEPKRIYELFSEAVNIECEFLLSHAPQNSHL 256 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKY----TENPFPWMSEVIDLKKEKNFFETRVTE 115 L+ Y+++ A+R +IGL PLF T P +M+ ++K NFFE R T Sbjct: 257 LDIGEIISYVRYSADRLLGEIGLSPLFNAPKPSTSFPLAFMT----VEKHTNFFERRSTA 312 Query: 116 YQ 117 Y Sbjct: 313 YS 314 >gi|256422447|ref|YP_003123100.1| ribonucleotide reductase [Chitinophaga pinensis DSM 2588] gi|256037355|gb|ACU60899.1| ribonucleotide reductase [Chitinophaga pinensis DSM 2588] Length = 324 Score = 37.4 bits (85), Expect = 0.77, Method: Compositional matrix adjust. Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 4/120 (3%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LN 61 DE +H N GI +IN+I+ E P ++ + + ++ E+ +E +G + ++ Sbjct: 194 DEQIHANAGIYLINKIREEYPEMFDEATITRVSNLVKESIEVESNILDWIFSEGKIDTVS 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +M++ A+ +I L LF + P W E + +FF R +Y + Sbjct: 254 KEHLVNFMKYRADDSLKKINLPALFNISTEDNKPMLWFEEEVFANSLDDFFAKRPVDYTK 313 >gi|242012701|ref|XP_002427066.1| Ribonucleoside-diphosphate reductase M2 subunit, putative [Pediculus humanus corporis] gi|212511324|gb|EEB14328.1| Ribonucleoside-diphosphate reductase M2 subunit, putative [Pediculus humanus corporis] Length = 304 Score = 37.0 bits (84), Expect = 0.82, Method: Compositional matrix adjust. Identities = 18/84 (21%), Positives = 43/84 (51%), Gaps = 7/84 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ P + + ++ +A +E + E +P +G+N Sbjct: 226 RDEGLHCDFACLMFKYV-VQKPT------EDEICDIIKDAVAIEQEFLTEALPVNLIGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPL 85 ++Y++F+A+R ++G + + Sbjct: 279 CSLMKKYIEFVADRLLVELGCKKV 302 >gi|45478633|ref|NP_995489.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis biovar Microtus str. 91001] gi|52788092|ref|YP_093920.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis] gi|145597234|ref|YP_001154698.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis Pestoides F] gi|162417832|ref|YP_001604568.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis Angola] gi|229896974|ref|ZP_04512133.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit [Yersinia pestis Pestoides A] gi|45357286|gb|AAS58680.1| putative ribonucleoside-diphosphate reductase beta subunit [Yersinia pestis biovar Microtus str. 91001] gi|52538021|emb|CAG27446.1| putative ribonucleoside-diphosphate reductase beta subunit [Yersinia pestis] gi|145213002|gb|ABP42407.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Yersinia pestis Pestoides F] gi|162350804|gb|ABX84753.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis Angola] gi|229700010|gb|EEO88050.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit [Yersinia pestis Pestoides A] Length = 380 Score = 37.0 bits (84), Expect = 0.93, Method: Compositional matrix adjust. Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 8/104 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIA-----YAHETMPKG 56 RDE+LH +I ++ L K + + +++ T++++A +A G Sbjct: 239 RDEALHCEGTERMIRFMRTGREGLMWKMIAAEEESFIYQ-TMMDVAGQEMRWADYLFKDG 297 Query: 57 -FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSE 98 +GLNA + Y+++ N ++GL PLF + ++P WM++ Sbjct: 298 SMIGLNADILKSYVKYRTNLAMRRLGLRPLFPEIKDDPLVWMNK 341 >gi|206968346|ref|ZP_03229302.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus AH1134] gi|228951834|ref|ZP_04113932.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229069005|ref|ZP_04202298.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus F65185] gi|206737266|gb|EDZ54413.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus AH1134] gi|228714117|gb|EEL65999.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus F65185] gi|228807757|gb|EEM54278.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 133 Score = 37.0 bits (84), Expect = 0.94, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 ++DES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 3 VKDESIHGVFVGILAQQIFAELSVEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 60 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP D K +FF + Y Sbjct: 61 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTDTKN-HDFFSVKGNGY 115 >gi|323512793|gb|ADX88247.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage ICP1_2006_D] gi|323513021|gb|ADX88474.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage ICP1_2006_C] gi|323513246|gb|ADX88698.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage ICP1_2006_B] gi|323513473|gb|ADX88924.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage ICP1_2006_A] gi|323513704|gb|ADX89154.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage ICP1_2005_A] Length = 450 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 8/108 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQ---KSRTMLHEATLLEIAYAHETMPKG- 56 M DE++H +IN + +W K F+ + ++ E++++ +G Sbjct: 229 MIDETIHTRMDEAIINILL--GDEVWLKTFEDIKPDIKEIVDSVYKQELSWSEYIFSEGR 286 Query: 57 -FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDL 102 VGLN ++++Q+ + ++G+E P NP PWM +D+ Sbjct: 287 SIVGLNTSLLKEWVQYKSQVVYKKLGIEQPFEDVINNPLPWMENWLDI 334 >gi|325171172|ref|YP_004251147.1| ribonucleoside diphosphate reductase, beta chain [Vibrio phage ICP1] gi|323512567|gb|ADX88022.1| ribonucleoside diphosphate reductase, beta chain [Vibrio phage ICP1] gi|323513935|gb|ADX89384.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage ICP1_2001_A] gi|323514163|gb|ADX89611.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage ICP1_2004_A] Length = 450 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 8/108 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQ---KSRTMLHEATLLEIAYAHETMPKG- 56 M DE++H +IN + +W K F+ + ++ E++++ +G Sbjct: 229 MIDETIHTRMDEAIINILL--GDEVWLKTFEDIKPDIKEIVDSVYKQELSWSEYIFSEGR 286 Query: 57 -FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDL 102 VGLN ++++Q+ + ++G+E P NP PWM +D+ Sbjct: 287 SIVGLNTSLLKEWVQYKSQVVYKKLGIEQPFEDVINNPLPWMENWLDI 334 >gi|417659|sp|P32209|RIR2_SWPVK RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|347472|gb|AAC37857.1| ribonucleotide reductase [Swinepox virus] Length = 274 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 7/82 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ +++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFAC-------LMFKHLLHPPSKEVITSIIIDAVNIEKEFLTVAIPVDLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLE 83 QY++F+A+R ++G E Sbjct: 248 CCLMSQYIEFVADRLLTELGCE 269 >gi|10834911|ref|NP_066872.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 3] gi|5102912|dbj|BAA78729.1| UL40 protein [Marek's disease virus serotype 2 MDV2] gi|5689312|dbj|BAA82936.1| UL40 product homolog [Marek's disease virus serotype 2 MDV2] gi|10800005|dbj|BAB16550.1| UL40 protein [Gallid herpesvirus 3] Length = 353 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 25/116 (21%), Positives = 46/116 (39%), Gaps = 5/116 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+ + N K + + + EA LE A+ P+ L+ Sbjct: 236 RDEAIHVEASCCIFKNYIAGN-----KPSTARIQALFSEAVDLECAFLRAAAPRDSRLLD 290 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 S Y+++ A+R + + P++ + ++ NFFE R T Y Sbjct: 291 IGSICSYVRYSADRLLRMLDVPPIYGEPSPAADFPLSLMSASNNTNFFERRSTAYS 346 >gi|327409820|ref|YP_004347240.1| ribonucleoside-diphosphate reductase small chain [Lausannevirus] gi|326784994|gb|AEA07128.1| ribonucleoside-diphosphate reductase small chain [Lausannevirus] Length = 319 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 27/121 (22%), Positives = 57/121 (47%), Gaps = 3/121 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+LH F +V+ ++ ++ + Q++ +L A + ++ V ++ Sbjct: 191 RDEALHKKFA-EVLYNFLVDELKVFERVSQERCHEILTSAIEAVTDFIKYSLRLDNVNID 249 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A YM+ + + E ++ EN +M +I L+ + NFFE +T+Y +G + Sbjct: 250 ADRMLGYMKRAVDDLATGLKYEKVYN-AENTLDYML-LIGLENKGNFFEGVITDYSKGMD 307 Query: 122 L 122 + Sbjct: 308 M 308 >gi|59912|emb|CAA24930.1| unnamed protein product [Human herpesvirus 2] Length = 337 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 30/120 (25%), Positives = 49/120 (40%), Gaps = 11/120 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT--MLHEATLLEIAYAHETMPKGFVG 59 RDE++H I N +L + +R + EA +EI + P Sbjct: 216 RDEAVH------TTASCYIYNNYLGDHAKPEAARVYRLFREAVDIEIGFIRSQAPTDSSI 269 Query: 60 LNA---PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 L+ + E Y++F A+R I ++PL+ + ++ K NFFE R T Y Sbjct: 270 LSPGALAAIENYVRFSADRLLGLIHMQPLYSAPAPDASFPLSLMSTDKHTNFFECRSTSY 329 >gi|326632980|ref|YP_004306569.1| putative aerobic ribonucleoside diphosphate reductase small subunit [Enterobacteria phage SPC35] gi|321272174|gb|ADW80066.1| putative aerobic ribonucleoside diphosphate reductase small subunit [Enterobacteria phage SPC35] Length = 381 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 4/104 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGL 60 +DE+LH +I + + E K+ L + EI + H + +GL Sbjct: 237 KDEALHTQMSKAIIQIMFQQFDKDLVNEAVAKAPAQLLKTLKTEIEWGHFIFKGRSLIGL 296 Query: 61 NAPSCEQYMQFIANRRCHQIGLE---PLFKYTENPFPWMSEVID 101 NA E+Y+ F+ IG++ L T+NP PW+ +D Sbjct: 297 NAELLEEYLYFVGRNAFMHIGVKWPSHLPVITKNPIPWIMNWLD 340 >gi|294661479|ref|YP_003579932.1| NrdB ribonucleotide reductase B subunit [Klebsiella phage KP15] gi|292660640|gb|ADE34888.1| NrdB ribonucleotide reductase B subunit [Klebsiella phage KP15] Length = 402 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 15/107 (14%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHLWTKEFQQKSRTMLHEATLL-------EIAYAHET 52 RDE+LH I Q+ ++P E + SR + EAT + E +A Sbjct: 260 RDEALHQKGTQSKIRLWQMGKDDP-----EMVEISRRLKKEATAIFLEVYEQEKEWAEHL 314 Query: 53 MPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE 98 G V G++ S Y++ + ++R +GL+ F NP+PWM++ Sbjct: 315 FSVGDVEGVSLKSTIAYIEHLTDQRMRAVGLDSPFTPIPNPYPWMNK 361 >gi|12084869|ref|NP_073334.1| ribonucleotide reductase subunit 2 [Meleagrid herpesvirus 1] gi|11095873|gb|AAG30080.1|AF282130_43 UL40 ribonucleotide reductase small subunit [Meleagrid herpesvirus 1] gi|12025152|gb|AAG45778.1|AF291866_45 UL40 ribonucleotide reductase, small subunit [Meleagrid herpesvirus 1] Length = 355 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 25/116 (21%), Positives = 48/116 (41%), Gaps = 5/116 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+ + +N K + T+ EA LE + P+ +N Sbjct: 238 RDEAIHVEASCCIF-----KNYLAGPKPTTARIHTLFKEAVRLECEFLRTAAPRTSNIIN 292 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + Y+++ A+R + + P++ + P + ++ NFFE R T Y Sbjct: 293 IDAICSYVRYSADRLLRALDILPIYDEPKPPADFPLVLMSAASNTNFFERRNTAYS 348 >gi|50313261|ref|YP_053065.1| ribonucleotide reductase subunit 2 [Equid herpesvirus 1] gi|132625|sp|P28847|RIR2_EHV1B RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|42795147|gb|AAS45904.1| small subunit of ribonucleotide reductase [Equid herpesvirus 1] gi|49617004|gb|AAT67277.1| ribonucleotide reductase RR2 [Equid herpesvirus 1] Length = 321 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 8/118 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT--MLHEATLLEIAYAHETMPKGFVG 59 RDE++H I N +L E + R + EA +E + P+ Sbjct: 203 RDEAIHTR------ASCCIYNNYLGGFEKPEPKRIYELFSEAVNIECEFLLSHAPQYSHL 256 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 L+ + Y+++ A+R +IGL PLF + + + ++K NFFE R T Y Sbjct: 257 LDIGAIISYVRYSADRLLGEIGLSPLFNAPKPSPSFPLAFMTVEKHTNFFERRSTAYS 314 >gi|159146681|gb|ABW90785.1| ribonucleotide reductase subunit 2 [Leporid herpesvirus 4] Length = 316 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 15/122 (12%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG---FV 58 RDE++H + N + + K ++ + + A +EIA+ P Sbjct: 195 RDEAVHTTASCCLYNNYLGQ----YAKPPSERIKQLFSNAVEIEIAFIKAKAPANSRILD 250 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENP----FPWMSEVIDLKKEKNFFETRVT 114 G + E Y++F A+R IG LF E P FP ++ +K NFFE R T Sbjct: 251 GAAIAAIESYVRFSADRLLKLIGEPALFD--EPPPNDGFPL--RLMSTEKHTNFFECRST 306 Query: 115 EY 116 Y Sbjct: 307 AY 308 >gi|703073|gb|AAA80557.1| ribonucleotide reductase small subunit [Gallid herpesvirus 2] Length = 354 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 24/116 (20%), Positives = 48/116 (41%), Gaps = 5/116 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+ + +N K + T+ EA +E + P+ +N Sbjct: 237 RDEAIHVEASCCIF-----KNYLAGPKPTTARIHTLFKEAVTVECEFLRTAAPRTSNIIN 291 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + Y+++ A+R + + P++ + P + ++ NFFE R T Y Sbjct: 292 IDAICSYVRYSADRLLRALDILPIYDEPKPPADFPLVLMSAASNTNFFERRNTAYS 347 >gi|326336655|ref|ZP_08202823.1| ribonucleoside-diphosphate reductase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691125|gb|EGD33096.1| ribonucleoside-diphosphate reductase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 319 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 5/120 (4%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LN 61 DE +H N GI ++ I ENP TK ++++ + E LLE +G + Sbjct: 190 DEQVHANAGIYILKTIFEENPEFRTKA-KEEATQFIREYILLEDKMLDWIFEEGELDFFT 248 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 YM++ + Q+ L F T P W E + + + +FF R T Y + Sbjct: 249 KKDLANYMRYRLDDALTQLDLGKPFGITAEEAKPMLWFEEEVFVNELDDFFAKRPTAYTK 308 >gi|301750612|gb|ADK88940.1| ribonucleotide reductase subunit 2 [Leporid herpesvirus 4] Length = 316 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 15/122 (12%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG---FV 58 RDE++H + N + + K ++ + + A +EIA+ P Sbjct: 195 RDEAVHTTASCCLYNNYLGQ----YAKPPSERIKQLFSNAVEIEIAFIKAKAPANSRILD 250 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENP----FPWMSEVIDLKKEKNFFETRVT 114 G + E Y++F A+R IG LF E P FP ++ +K NFFE R T Sbjct: 251 GAAIAAIESYVRFSADRLLKLIGEPALFD--EPPPNDGFPL--RLMSTEKHTNFFECRST 306 Query: 115 EY 116 Y Sbjct: 307 AY 308 >gi|228473186|ref|ZP_04057941.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga gingivalis ATCC 33624] gi|228275336|gb|EEK14128.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga gingivalis ATCC 33624] Length = 319 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 5/120 (4%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGLN 61 DE +H N GI ++ I ENP TK ++++ + E LLE +G + Sbjct: 190 DEQVHANAGIYILKTIFDENPEFRTKA-KKEATEFIREYILLEDKMLDWIFEEGELEFFS 248 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 YM++ + Q+ L F T P W E + + + +FF R T Y + Sbjct: 249 KKDLANYMRYRLDDALTQLDLGKPFGITAEEAKPMLWFEEEVFVNELDDFFAKRPTAYTK 308 >gi|293411957|ref|ZP_06654682.1| ribonucleoside-diphosphate reductase [Escherichia coli B354] gi|309797907|ref|ZP_07692288.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 145-7] gi|220980068|emb|CAP72260.1| Ribonucleoside-diphosphate reductase subunit beta [Escherichia coli LF82] gi|291469512|gb|EFF12001.1| ribonucleoside-diphosphate reductase [Escherichia coli B354] gi|308118515|gb|EFO55777.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 145-7] gi|323934216|gb|EGB30640.1| ribonucleotide reductase [Escherichia coli E1520] Length = 380 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 8/104 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIA-----YAHETMPKG 56 RDE+LH +I ++ L KE ++++ T+ +A +A G Sbjct: 239 RDEALHCEGTERMIRFMRTGREGLLWKEIAADEENVIYD-TMKSVAEQEMNWADYLFKDG 297 Query: 57 -FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSE 98 +GLNA + Y+++ N +++GL+ LF + T +P WM++ Sbjct: 298 SMIGLNADILKTYVKYRTNLAMNRLGLKALFPEVTTDPLVWMNK 341 >gi|147800139|emb|CAN68817.1| hypothetical protein VITISV_036653 [Vitis vinifera] Length = 924 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%) Query: 89 TENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 ENPF WM E I L+ NFF+ R+ +YQ+ + Sbjct: 755 VENPFDWM-EFISLQGNANFFQRRMGDYQKAS 785 >gi|256820037|ref|YP_003141316.1| ribonucleotide reductase [Capnocytophaga ochracea DSM 7271] gi|315225453|ref|ZP_07867266.1| ribonucleoside-diphosphate reductase [Capnocytophaga ochracea F0287] gi|256581620|gb|ACU92755.1| ribonucleotide reductase [Capnocytophaga ochracea DSM 7271] gi|314944551|gb|EFS96587.1| ribonucleoside-diphosphate reductase [Capnocytophaga ochracea F0287] Length = 319 Score = 35.0 bits (79), Expect = 3.9, Method: Compositional matrix adjust. Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 5/120 (4%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LN 61 DE LH N GI ++ +I ENP + K ++ + T + LE +G + + Sbjct: 190 DEQLHANAGIYILKKIFEENPEMKAKA-EEDATTFIRSYITLEDKMLDWIFEQGELEFFS 248 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 YM++ + Q+GL F + P W E + + +FF R T Y + Sbjct: 249 KKDLSNYMRYRLDDSLTQLGLGKPFGISGEEAKPMMWFEEEVFSNELDDFFAKRPTAYTK 308 >gi|45259565|dbj|BAD12265.1| p53-inducible ribonucleotide reductase small subunit 2 short form beta [Homo sapiens] Length = 66 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 18/32 (56%), Positives = 23/32 (71%), Gaps = 1/32 (3%) Query: 89 TENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 20 AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 50 >gi|56694763|ref|YP_164483.1| ribonucleotide reductase subunit 2 [Cercopithecine herpesvirus 2] gi|52843315|gb|AAU88106.1| small subunit of ribonucleotide reductase [Cercopithecine herpesvirus 2] Length = 325 Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 7/118 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N + H K ++ + EA +EI + P L+ Sbjct: 204 RDEAVHTTASCYIYNNY-LAGHH---KPEPERVYRLFREAVEIEIGFIRSQAPADSRILD 259 Query: 62 APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 A + E Y++F A+R I ++PLF + ++ +K NFFE R T Y Sbjct: 260 AAALAAIENYVRFSADRLLALIRMKPLFGAPAPAPSFPLSLMSTEKHTNFFECRSTAY 317 >gi|326804582|ref|YP_004327453.1| Ribonucleotide-diphosphate reductase beta subunit [Salmonella phage Vi01] gi|301795232|emb|CBW37950.1| Ribonucleotide-diphosphate reductase beta subunit [Salmonella phage Vi01] Length = 367 Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 4/106 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPH--LWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FV 58 RDE HL +N++ + +P + +E + + M + E +A+ G + Sbjct: 232 RDEQDHLILTQTFLNRLPLLDPDFGIIREELRGEMTQMYVDVVNQEKEWANYLFKDGSML 291 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDLK 103 GLNA Q + ++A R IG P +NP PW++E +D K Sbjct: 292 GLNANILHQMVDWLATHRMGAIGHPYPGQARKDNPVPWINEWLDNK 337 >gi|146301802|ref|YP_001196393.1| ribonucleotide reductase [Flavobacterium johnsoniae UW101] gi|146156220|gb|ABQ07074.1| ribonucleotide reductase [Flavobacterium johnsoniae UW101] Length = 324 Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust. Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 4/120 (3%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GLN 61 DE +H N GI +IN+I+ E P + +E R + ++ +E +G + + Sbjct: 194 DEQIHANGGIYIINKIREEFPDYFDEETLALVRETVKDSIAVESDILDWIFEEGEIESIK 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQQ 118 +M+F + QI + +F + W E + +FF R EY + Sbjct: 254 KGDLVNFMKFRIDESLKQINIPVIFDVKVEDYKALAWFEEEVFANSLDDFFAKRPVEYTK 313 >gi|161622513|ref|YP_001595352.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage JS98] gi|160213819|gb|ABX11158.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage JS98] Length = 379 Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 7/107 (6%) Query: 2 RDESLHLNFGIDVINQIKI-ENPHLWTK---EFQQKSRTMLHEATLLEIAYAHETMPKGF 57 RDE LHL +I Q+++ + W K E +Q++ + E E +A G Sbjct: 236 RDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQEKEWAAHLFKDGT 295 Query: 58 V-GLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101 GLN + ++ ++ R Q GL P+ T +P+PW+ E ++ Sbjct: 296 CPGLNTQNMGAFVDYLTVSRMKQCGLPCPITDAPTRHPYPWIREYLN 342 >gi|238695377|ref|YP_002922570.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage JS10] gi|220029513|gb|ACL78447.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage JS10] Length = 379 Score = 34.3 bits (77), Expect = 6.6, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 7/107 (6%) Query: 2 RDESLHLNFGIDVINQIKI-ENPHLWTK---EFQQKSRTMLHEATLLEIAYAHETMPKGF 57 RDE LHL +I Q+++ + W K E +Q++ + E E +A G Sbjct: 236 RDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQEKEWAGHLFKDGT 295 Query: 58 V-GLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101 GLN + ++ ++ R Q GL P+ T +P+PW+ E ++ Sbjct: 296 CPGLNTQNMGAFVDYLTVSRMKQCGLPCPITDAPTRHPYPWIREYLN 342 >gi|159040974|ref|YP_001540226.1| Alpha-L-fucosidase [Caldivirga maquilingensis IC-167] gi|157919809|gb|ABW01236.1| Alpha-L-fucosidase [Caldivirga maquilingensis IC-167] Length = 484 Score = 34.3 bits (77), Expect = 6.6, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 10/97 (10%) Query: 20 IENPH----LWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV---GLNAPSCEQYMQFI 72 I+ PH LW + + L++ L I + P+ F + PS E Y++F Sbjct: 193 IKEPHEQGKLWPQPVEPPGEAFLNDWLLRAIELVDKYRPQLFYFDWWIEYPSFEPYLRFF 252 Query: 73 AN---RRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK 106 R +Q GLE Y N P + V+D+++ K Sbjct: 253 TAYYYNRAYQWGLEVAINYKHNAMPSWAGVLDVERGK 289 >gi|257464834|ref|ZP_05629205.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus minor 202] gi|257450494|gb|EEV24537.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus minor 202] Length = 326 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 16/127 (12%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 ++E +H FGI + ++ E+ L+T F ++ +T+ ++A E +G L+ Sbjct: 195 KEEEIHGKFGIALYEILRDEHSELFTPAFFEELQTLANQAFEAEKGILDWIFEEG--DLS 252 Query: 62 APSCEQYMQFIANRRCHQI---GLEP-------LFKYTENPFPWMSEVIDLKKEKNFFET 111 S E + +I +R + + GLEP L K T W I KE +FF Sbjct: 253 FISKETVLNYIKSRYNNSLVTLGLEPPHNINPELLKET----AWFDIEILSTKETDFFNK 308 Query: 112 RVTEYQQ 118 R T+Y + Sbjct: 309 RSTDYSK 315 >gi|299779174|ref|YP_003734368.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage IME08] gi|298105903|gb|ADI55547.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage IME08] Length = 389 Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 7/107 (6%) Query: 2 RDESLHLNFGIDVINQIKI-ENPHLWTK---EFQQKSRTMLHEATLLEIAYAHETMPKGF 57 RDE LHL +I Q+++ + W K E +Q++ + E E +A G Sbjct: 246 RDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQEKEWATHLFKDGT 305 Query: 58 V-GLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101 GLN + ++ ++ R Q GL P+ T +P+PW+ E ++ Sbjct: 306 CPGLNTQNMGAFVDYLTVSRMKQCGLPCPITDAPTRHPYPWIREYLN 352 >gi|109290088|ref|YP_656337.1| hypothetical protein PHG25ORF102c [Aeromonas phage 25] gi|104345761|gb|ABF72661.1| hypothetical protein PHG25ORF102c [Aeromonas phage 25] Length = 332 Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust. Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 6/80 (7%) Query: 39 HEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP-WMS 97 HE+ ++++ +A + G+ A +++ N +G EP+F+ NP W Sbjct: 246 HESGIIDLVFA-----EPIDGITADELRVFVKSRINLCLENLGYEPIFEIENNPIADWFY 300 Query: 98 EVIDLKKEKNFFETRVTEYQ 117 I+ KK +FF +EY Sbjct: 301 RTINAKKFHDFFTGSGSEYN 320 >gi|37651592|ref|NP_932466.1| hypothetical protein 44RRORF111c [Aeromonas phage 44RR2.8t] gi|66391913|ref|YP_238838.1| hypothetical protein PHG31p109 [Aeromonas phage 31] gi|34732892|gb|AAQ81430.1| hypothetical protein 44RRORF111c [Aeromonas phage 44RR2.8t] gi|62114750|gb|AAX63598.1| hypothetical protein PHG31p109 [Aeromonas phage 31] Length = 323 Score = 33.9 bits (76), Expect = 8.0, Method: Compositional matrix adjust. Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 10/88 (11%) Query: 39 HEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP-WMS 97 HE+ ++++ +A + G+ A +++ N +G +P+F+ NP W Sbjct: 237 HESGIIDLVFA-----EPIDGITADELRIFVKSRINLCLENLGYDPIFEIESNPIASWFY 291 Query: 98 EVIDLKKEKNFFETRVTEYQQGAELKWD 125 I+ KK +FF +EY + WD Sbjct: 292 RTINAKKFHDFFTGSGSEYN----INWD 315 >gi|300776394|ref|ZP_07086252.1| ribonucleoside-diphosphate reductase [Chryseobacterium gleum ATCC 35910] gi|300501904|gb|EFK33044.1| ribonucleoside-diphosphate reductase [Chryseobacterium gleum ATCC 35910] Length = 371 Score = 33.9 bits (76), Expect = 8.5, Method: Compositional matrix adjust. Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 4/120 (3%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GLN 61 DE +H N GI +IN+I+ E P L T + T++ E+ E G + ++ Sbjct: 241 DEQIHANAGIYLINKIREEQPDLLTDSDIEDIYTLVDESIAREGDILSWIFELGEIDNVS 300 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +M++ + +I ++ + T P W E + +FF R +Y + Sbjct: 301 KEDLLNFMKYRVDDSLKKINMKTRYNITPEQYRPMVWFEEEVFANSLDDFFAKRPVDYTK 360 >gi|310722361|ref|YP_003969185.1| hypothetical protein phiAS4_ORF0167 [Aeromonas phage phiAS4] gi|306021204|gb|ADM79739.1| hypothetical protein phiAS4_ORF0167 [Aeromonas phage phiAS4] Length = 332 Score = 33.5 bits (75), Expect = 9.2, Method: Compositional matrix adjust. Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 6/80 (7%) Query: 39 HEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP-WMS 97 HE+ ++++ +A G+ A +++ N +G EP+F+ NP W Sbjct: 246 HESGIIDLVFAEPID-----GITADELRVFVKSRINLCLENLGYEPIFEIENNPIADWFY 300 Query: 98 EVIDLKKEKNFFETRVTEYQ 117 I+ KK +FF +EY Sbjct: 301 RTINAKKFHDFFTGSGSEYN 320 >gi|240950330|ref|ZP_04754600.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus minor NM305] gi|240295141|gb|EER45960.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus minor NM305] Length = 326 Score = 33.5 bits (75), Expect = 9.3, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 16/127 (12%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 ++E +H FGI + ++ E+ L+T F ++ +T+ +A E +G L+ Sbjct: 195 KEEEIHGKFGIALYEILRDEHSELFTPAFFEELQTLASQAFEAEKGILDWIFEEG--DLS 252 Query: 62 APSCEQYMQFIANRRCHQI---GLEP-------LFKYTENPFPWMSEVIDLKKEKNFFET 111 S E + +I +R + + GLEP L K T W I KE +FF Sbjct: 253 FISKETVLNYIKSRYNNSLVTLGLEPPHDINPELLKET----AWFDIEILSTKETDFFNK 308 Query: 112 RVTEYQQ 118 R T+Y + Sbjct: 309 RSTDYSK 315 >gi|83722609|ref|YP_443887.1| ribonucleotide reductase subunit 2 [Papiine herpesvirus 2] gi|75905762|gb|ABA29294.1| UL40 [Papiine herpesvirus 2] Length = 339 Score = 33.5 bits (75), Expect = 9.3, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 7/118 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N + K ++ + EA +EI + P L+ Sbjct: 218 RDEAVHTTASCYIYNNYLAGH----RKPEPERVYRLFREAVEIEIGFIRSQAPADSRILD 273 Query: 62 APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 A + E Y++F A+R I ++PLF + ++ +K NFFE R T Y Sbjct: 274 AAALAAIENYVRFSADRLLALIEMKPLFGAPAPAPSFPLNLMSTEKHTNFFERRSTAY 331 >gi|125745092|ref|YP_001033969.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 2] gi|327488446|sp|Q77MS0|RIR2_GAHVM RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|7673151|gb|AAF66775.1|AF147806_39 ribonucleotide reductase small subunit [Gallid herpesvirus 2] gi|10180745|gb|AAG14233.1|AF243438_48 UL40 ribonucleotide reductase small subunit-like protein [Gallid herpesvirus 2] gi|104304005|gb|ABF72280.1| HSV-1 UL40-like protein [Gallid herpesvirus 2] gi|148806369|gb|ABR13125.1| UL40 [Gallid herpesvirus 2] gi|194346388|gb|ACF49570.1| UL40 [synthetic construct] gi|194750382|gb|ACF94859.1| UL40 [Gallid herpesvirus 2] gi|237626230|gb|ACR02753.1| UL40 [synthetic construct] gi|237626404|gb|ACR02926.1| UL40 [synthetic construct] Length = 343 Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust. Identities = 23/116 (19%), Positives = 50/116 (43%), Gaps = 5/116 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+ + +N + K + + + EA +E A+ P+ L+ Sbjct: 226 RDEAIHVEASCCIF-----KNYLMGPKPSIGRVQELFKEAVQIECAFLRTAAPRNSQLLD 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + Y+++ A+R ++ + P++ + + ++ NFFE R T Y Sbjct: 281 VEAICSYVRYSADRLLKELDMPPIYNEPKPTADFPLALMTASNNTNFFERRNTAYS 336 Searching..................................................done Results from round 2 >gi|260220050|emb|CBA27200.1| Ribonucleoside-diphosphate reductase subunit alpha [Curvibacter putative symbiont of Hydra magnipapillata] Length = 1306 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 78/125 (62%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENPHLWT EF+ + + + +A LE YA +TMP+G +G+ Sbjct: 1182 LRDESMHCNFGIDLINQLKLENPHLWTPEFKAEIKALFEKAVELEYRYAEDTMPRGVLGM 1241 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLEPLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 1242 NASMFKGYLRYIANRRATQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 1301 Query: 121 ELKWD 125 L WD Sbjct: 1302 ALSWD 1306 >gi|288941383|ref|YP_003443623.1| Ribonucleoside-diphosphate reductase [Allochromatium vinosum DSM 180] gi|288896755|gb|ADC62591.1| Ribonucleoside-diphosphate reductase [Allochromatium vinosum DSM 180] Length = 458 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 86/125 (68%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIKIENPHLWT EF+Q+ M+ EA LE YAH+TMP+G +GL Sbjct: 334 LRDESMHMNFGIDVINQIKIENPHLWTPEFRQELVGMIREAVELEARYAHDTMPRGVLGL 393 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y+ FIANRRC QIGL + NPFPWMSEV+DLKKEKNFFETRVTEYQ G Sbjct: 394 NAQMFEDYLHFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 453 Query: 121 ELKWD 125 L WD Sbjct: 454 ALNWD 458 >gi|187479453|ref|YP_787478.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella avium 197N] gi|115424040|emb|CAJ50593.1| ribonucleoside-diphosphate reductase beta chain [Bordetella avium 197N] Length = 394 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN IK+ENPHLWT EF+++ R + +A LE AYA +TMP+G +GL Sbjct: 270 LRDESMHCNFGIDLINTIKLENPHLWTPEFREEIRELFRKAVELEYAYAEDTMPRGVLGL 329 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FIANRRC QIG+EPL+ ENPFPWM+E+IDLKKE+NFFETRV EYQ G Sbjct: 330 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 389 Query: 121 ELKWD 125 L W+ Sbjct: 390 TLSWE 394 >gi|238026167|ref|YP_002910398.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia glumae BGR1] gi|237875361|gb|ACR27694.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia glumae BGR1] Length = 407 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL Sbjct: 283 LRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIRELFKRAVELEYRYAEDTMPRGVLGL 342 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FIANRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 343 NAAMFKSYLRFIANRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 402 Query: 121 ELKWD 125 L W+ Sbjct: 403 ALSWE 407 >gi|209521089|ref|ZP_03269819.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. H160] gi|209498472|gb|EDZ98597.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. H160] Length = 411 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 287 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRAIFQQAVELEYRYAEDTMPRGVLGL 346 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 347 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 406 Query: 121 ELKWD 125 L W+ Sbjct: 407 ALSWE 411 >gi|295677726|ref|YP_003606250.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1002] gi|295437569|gb|ADG16739.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1002] Length = 411 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 287 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRAIFQQAVELEYRYAEDTMPRGVLGL 346 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 347 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 406 Query: 121 ELKWD 125 L W+ Sbjct: 407 ALSWE 411 >gi|313200886|ref|YP_004039544.1| ribonucleoside-diphosphate reductase [Methylovorus sp. MP688] gi|312440202|gb|ADQ84308.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. MP688] Length = 381 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 75/125 (60%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN +K+ENPHLWT EF+++ + ++ +A LE YA +TMP+G +GL Sbjct: 257 LRDESMHCNFGIDLINTLKLENPHLWTPEFREEIKRLMQQAVELEYRYAEDTMPRGVLGL 316 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA ++Y++FIANRR QIG++ L+ NPFPWMSE++DLKKEKNFFETRVTEYQ G Sbjct: 317 NAAMFKEYLRFIANRRMQQIGIDALYPGASNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 376 Query: 121 ELKWD 125 L WD Sbjct: 377 ALSWD 381 >gi|254253304|ref|ZP_04946622.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia dolosa AUO158] gi|124895913|gb|EAY69793.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia dolosa AUO158] Length = 403 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 339 NASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398 Query: 121 ELKWD 125 L W+ Sbjct: 399 ALSWE 403 >gi|33593916|ref|NP_881560.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella pertussis Tohama I] gi|33598411|ref|NP_886054.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella parapertussis 12822] gi|33603351|ref|NP_890911.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella bronchiseptica RB50] gi|33563990|emb|CAE43255.1| ribonucleoside-diphosphate reductase beta chain [Bordetella pertussis Tohama I] gi|33574540|emb|CAE39187.1| ribonucleoside-diphosphate reductase beta chain [Bordetella parapertussis] gi|33577475|emb|CAE34740.1| ribonucleoside-diphosphate reductase beta chain [Bordetella bronchiseptica RB50] gi|332383335|gb|AEE68182.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella pertussis CS] Length = 398 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 81/125 (64%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN IK+ENPHLWT EF+++ R + +A LE AYA +TMP+G +GL Sbjct: 274 LRDESMHCNFGIDLINTIKLENPHLWTPEFREEIRELFRKAVELEYAYAEDTMPRGVLGL 333 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FIANRRC QIG+EPLF ENPFPWM+E+IDLKKE+NFFETRV EYQ G Sbjct: 334 NAPMFKSYLRFIANRRCQQIGIEPLFPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 393 Query: 121 ELKWD 125 L W+ Sbjct: 394 TLSWE 398 >gi|161525957|ref|YP_001580969.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia multivorans ATCC 17616] gi|160343386|gb|ABX16472.1| Ribonucleoside-diphosphate reductase [Burkholderia multivorans ATCC 17616] Length = 396 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 272 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 331 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 332 NASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 391 Query: 121 ELKWD 125 L W+ Sbjct: 392 ALSWE 396 >gi|253998799|ref|YP_003050862.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. SIP3-4] gi|253985478|gb|ACT50335.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. SIP3-4] Length = 383 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 75/125 (60%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN +K+ENPHLWT EF+++ + ++ +A LE YA +TMP+G +GL Sbjct: 259 LRDESMHCNFGIDLINTLKLENPHLWTPEFREEIKRLMQQAVELEYRYAEDTMPRGVLGL 318 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA ++Y++FIANRR QIG++ L+ NPFPWMSE++DLKKEKNFFETRVTEYQ G Sbjct: 319 NAAMFKEYLRFIANRRMQQIGIDALYPGASNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 378 Query: 121 ELKWD 125 L WD Sbjct: 379 ALSWD 383 >gi|170699976|ref|ZP_02891003.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria IOP40-10] gi|170135124|gb|EDT03425.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria IOP40-10] Length = 403 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398 Query: 121 ELKWD 125 L W+ Sbjct: 399 ALSWE 403 >gi|78065156|ref|YP_367925.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia sp. 383] gi|77965901|gb|ABB07281.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. 383] Length = 403 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398 Query: 121 ELKWD 125 L W+ Sbjct: 399 ALSWE 403 >gi|115350552|ref|YP_772391.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia ambifaria AMMD] gi|172059584|ref|YP_001807236.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia ambifaria MC40-6] gi|115280540|gb|ABI86057.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria AMMD] gi|171992101|gb|ACB63020.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria MC40-6] Length = 403 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398 Query: 121 ELKWD 125 L W+ Sbjct: 399 ALSWE 403 >gi|171318520|ref|ZP_02907672.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria MEX-5] gi|171096306|gb|EDT41212.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria MEX-5] Length = 403 Score = 206 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398 Query: 121 ELKWD 125 L W+ Sbjct: 399 ALSWE 403 >gi|163854887|ref|YP_001629185.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella petrii DSM 12804] gi|163258615|emb|CAP40914.1| ribonucleoside-diphosphate reductase beta chain [Bordetella petrii] Length = 396 Score = 206 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN IK+ENPHLWT EF+++ R + +A LE AYA +TMP+G +GL Sbjct: 272 LRDESMHCNFGIDLINTIKLENPHLWTPEFREEIRGLFQKAVELEYAYAEDTMPRGVLGL 331 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FIANRRC QIG+EPL+ ENPFPWM+E+IDLKKE+NFFETRV EYQ G Sbjct: 332 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 391 Query: 121 ELKWD 125 L W+ Sbjct: 392 TLSWE 396 >gi|91785256|ref|YP_560462.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia xenovorans LB400] gi|91689210|gb|ABE32410.1| Ribonucleoside-diphosphate reductase [Burkholderia xenovorans LB400] Length = 411 Score = 206 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 78/125 (62%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENP LWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 287 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 346 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 347 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 406 Query: 121 ELKWD 125 L W+ Sbjct: 407 ALTWE 411 >gi|207744360|ref|YP_002260752.1| transmembrane ribonucleoside reductase (small chain) protein [Ralstonia solanacearum IPO1609] gi|206595765|emb|CAQ62692.1| transmembrane ribonucleoside reductase (small chain) protein [Ralstonia solanacearum IPO1609] Length = 410 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 83/125 (66%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL Sbjct: 286 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 345 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FI NRRC QIGLEPLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 346 NAPMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 405 Query: 121 ELKWD 125 L WD Sbjct: 406 ALSWD 410 >gi|83746810|ref|ZP_00943858.1| Ribonucleoside-diphosphate reductase beta chain [Ralstonia solanacearum UW551] gi|207721465|ref|YP_002251905.1| transmembrane ribonucleoside reductase (small chain) protein [Ralstonia solanacearum MolK2] gi|83726579|gb|EAP73709.1| Ribonucleoside-diphosphate reductase beta chain [Ralstonia solanacearum UW551] gi|206586625|emb|CAQ17211.1| transmembrane ribonucleoside reductase (small chain) protein [Ralstonia solanacearum MolK2] Length = 402 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 83/125 (66%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FI NRRC QIGLEPLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 338 NAPMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397 Query: 121 ELKWD 125 L WD Sbjct: 398 ALSWD 402 >gi|300703002|ref|YP_003744604.1| ribonucleoside diphosphate reductase 1 subunit beta, ferritin-like [Ralstonia solanacearum CFBP2957] gi|299070665|emb|CBJ41960.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Ralstonia solanacearum CFBP2957] Length = 402 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 83/125 (66%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FI NRRC QIGLEPLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 338 NAPMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397 Query: 121 ELKWD 125 L WD Sbjct: 398 ALSWD 402 >gi|307731037|ref|YP_003908261.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1003] gi|307585572|gb|ADN58970.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1003] Length = 411 Score = 206 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 78/125 (62%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENP LWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 287 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 346 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 347 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 406 Query: 121 ELKWD 125 L W+ Sbjct: 407 ALTWE 411 >gi|296160506|ref|ZP_06843322.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. Ch1-1] gi|295889255|gb|EFG69057.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. Ch1-1] Length = 415 Score = 206 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 78/125 (62%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENP LWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 291 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 351 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L W+ Sbjct: 411 ALTWE 415 >gi|170731918|ref|YP_001763865.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia cenocepacia MC0-3] gi|169815160|gb|ACA89743.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia MC0-3] Length = 403 Score = 206 bits (525), Expect = 8e-52, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398 Query: 121 ELKWD 125 L W+ Sbjct: 399 ALSWE 403 >gi|224825450|ref|ZP_03698555.1| Ribonucleoside-diphosphate reductase [Lutiella nitroferrum 2002] gi|224602371|gb|EEG08549.1| Ribonucleoside-diphosphate reductase [Lutiella nitroferrum 2002] Length = 360 Score = 206 bits (525), Expect = 8e-52, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN +K ENP LWT+EF+ + + A LE AYA +TMP+G +GL Sbjct: 236 LRDESMHCNFGIDLINTVKQENPQLWTEEFKAEITGLFKHAVELEYAYAEDTMPRGVLGL 295 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA ++Y++FIANRR QIGLEP+F NPFPWMSE+IDLKKEKNFFETRVTEYQ G Sbjct: 296 NAAMFKEYLRFIANRRMQQIGLEPMFPGVTNPFPWMSEMIDLKKEKNFFETRVTEYQTGG 355 Query: 121 ELKWD 125 L WD Sbjct: 356 ALSWD 360 >gi|34497739|ref|NP_901954.1| ribonucleotide-diphosphate reductase subunit beta [Chromobacterium violaceum ATCC 12472] gi|34103595|gb|AAQ59956.1| ribonucleoside-diphosphate reductase system [Chromobacterium violaceum ATCC 12472] Length = 360 Score = 206 bits (525), Expect = 9e-52, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN IK+ENP LWT F+ + + +A LE AYA +TMP+G +GL Sbjct: 236 LRDESMHCNFGIDLINTIKLENPLLWTDSFKAEIVDLFKQAVELEYAYAEDTMPRGVLGL 295 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA ++Y++FIANRR QIGL+PLF NPFPWMSE+IDLKKEKNFFETRVTEYQ G Sbjct: 296 NASMFKEYLRFIANRRMQQIGLDPLFPGVNNPFPWMSEMIDLKKEKNFFETRVTEYQTGG 355 Query: 121 ELKWD 125 L WD Sbjct: 356 ALSWD 360 >gi|332530699|ref|ZP_08406630.1| ribonucleotide-diphosphate reductase subunit beta [Hylemonella gracilis ATCC 19624] gi|332039867|gb|EGI76262.1| ribonucleotide-diphosphate reductase subunit beta [Hylemonella gracilis ATCC 19624] Length = 399 Score = 206 bits (525), Expect = 9e-52, Method: Composition-based stats. Identities = 78/125 (62%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENP LWT EF+ + R + +A LE YA +TMP+G +G+ Sbjct: 275 LRDESMHCNFGIDLINQIKLENPQLWTPEFKAEIRGLFEKAVELEYRYAEDTMPRGVLGM 334 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 335 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 394 Query: 121 ELKWD 125 L WD Sbjct: 395 ALSWD 399 >gi|134294683|ref|YP_001118418.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia vietnamiensis G4] gi|134137840|gb|ABO53583.1| Ribonucleoside-diphosphate reductase [Burkholderia vietnamiensis G4] Length = 403 Score = 206 bits (525), Expect = 9e-52, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVELEYRYAEDTMPRGVLGL 338 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398 Query: 121 ELKWD 125 L W+ Sbjct: 399 ALSWE 403 >gi|220935777|ref|YP_002514676.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp. HL-EbGR7] gi|219997087|gb|ACL73689.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp. HL-EbGR7] Length = 408 Score = 206 bits (525), Expect = 9e-52, Method: Composition-based stats. Identities = 83/125 (66%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIK+ENPHLWT F+++ RTM+ +A LE YA +TMP+G +G+ Sbjct: 284 LRDESMHMNFGIDVINQIKVENPHLWTAAFKEEMRTMIRDAVELEAQYARDTMPRGVLGM 343 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+ FIANRRC QIGL ++ ENPFPWMSEV+DLKKEKNFFETRVTEYQ G Sbjct: 344 NAAMFEEYLHFIANRRCAQIGLAEIYPGAENPFPWMSEVLDLKKEKNFFETRVTEYQTGG 403 Query: 121 ELKWD 125 L WD Sbjct: 404 ALSWD 408 >gi|189349324|ref|YP_001944952.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia multivorans ATCC 17616] gi|221213238|ref|ZP_03586213.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia multivorans CGD1] gi|189333346|dbj|BAG42416.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia multivorans ATCC 17616] gi|221166690|gb|EED99161.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia multivorans CGD1] Length = 403 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 339 NASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398 Query: 121 ELKWD 125 L W+ Sbjct: 399 ALSWE 403 >gi|330815478|ref|YP_004359183.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia gladioli BSR3] gi|327367871|gb|AEA59227.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia gladioli BSR3] Length = 407 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL Sbjct: 283 LRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIRELFKHAVELEYRYAEDTMPRGVLGL 342 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FIANRRC QIGL+ L+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 343 NASMFKSYLRFIANRRCQQIGLDALYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 402 Query: 121 ELKWD 125 L W+ Sbjct: 403 ALSWE 407 >gi|187925407|ref|YP_001897049.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia phytofirmans PsJN] gi|187716601|gb|ACD17825.1| Ribonucleoside-diphosphate reductase [Burkholderia phytofirmans PsJN] Length = 415 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 78/125 (62%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENP LWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 291 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 351 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L W+ Sbjct: 411 ALTWE 415 >gi|107021673|ref|YP_620000.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia cenocepacia AU 1054] gi|116688619|ref|YP_834242.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia cenocepacia HI2424] gi|105891862|gb|ABF75027.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia AU 1054] gi|116646708|gb|ABK07349.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia HI2424] Length = 382 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 258 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 317 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 318 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 377 Query: 121 ELKWD 125 L W+ Sbjct: 378 ALSWE 382 >gi|186477386|ref|YP_001858856.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia phymatum STM815] gi|184193845|gb|ACC71810.1| Ribonucleoside-diphosphate reductase [Burkholderia phymatum STM815] Length = 407 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 78/125 (62%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL Sbjct: 283 LRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIREIFKHAVDLEYRYAEDTMPRGVLGL 342 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIG++PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 343 NASMFKSYLRFICNRRCQQIGIDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 402 Query: 121 ELKWD 125 L W+ Sbjct: 403 ALSWE 407 >gi|206561765|ref|YP_002232530.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia cenocepacia J2315] gi|254246390|ref|ZP_04939711.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia cenocepacia PC184] gi|124871166|gb|EAY62882.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia cenocepacia PC184] gi|198037807|emb|CAR53751.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia cenocepacia J2315] Length = 403 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398 Query: 121 ELKWD 125 L W+ Sbjct: 399 ALSWE 403 >gi|325519933|gb|EGC99191.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia sp. TJI49] Length = 403 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398 Query: 121 ELKWD 125 L W+ Sbjct: 399 ALSWE 403 >gi|332286774|ref|YP_004418685.1| ribonucleoside-diphosphate reductase beta chain [Pusillimonas sp. T7-7] gi|330430727|gb|AEC22061.1| ribonucleoside-diphosphate reductase beta chain [Pusillimonas sp. T7-7] Length = 387 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 81/125 (64%), Positives = 100/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN IK+ENPHLWT EF+++ R + +A LE AYA +TMP+G +GL Sbjct: 263 LRDESMHCNFGIDLINTIKLENPHLWTAEFREELRELFKKAVDLEYAYAEDTMPRGVLGL 322 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FIANRRC QIGLEPLF ENPFPWM+E+IDLKKE+NFFETRV EYQ G Sbjct: 323 NASMFKSYLRFIANRRCQQIGLEPLFGQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 382 Query: 121 ELKWD 125 L W+ Sbjct: 383 ALSWE 387 >gi|92112799|ref|YP_572727.1| ribonucleotide-diphosphate reductase subunit beta [Chromohalobacter salexigens DSM 3043] gi|91795889|gb|ABE58028.1| Ribonucleoside-diphosphate reductase [Chromohalobacter salexigens DSM 3043] Length = 420 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 82/125 (65%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFG+D+INQIKIENPHLWT EFQ + M+ E T LEIAYA ++MP+G +G+ Sbjct: 296 LRDESMHLNFGVDMINQIKIENPHLWTPEFQDEVTQMIIEGTELEIAYARDSMPRGVLGM 355 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+ FI NRR QIGL+ + ENPFPWMSE+IDL+KEKNFFETRVTEYQ G Sbjct: 356 NAAIMEEYLHFICNRRLAQIGLKEQYPGAENPFPWMSEIIDLRKEKNFFETRVTEYQVGG 415 Query: 121 ELKWD 125 L WD Sbjct: 416 ALSWD 420 >gi|121595925|ref|YP_987821.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax sp. JS42] gi|222112113|ref|YP_002554377.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax ebreus TPSY] gi|120608005|gb|ABM43745.1| Ribonucleoside-diphosphate reductase [Acidovorax sp. JS42] gi|221731557|gb|ACM34377.1| Ribonucleoside-diphosphate reductase [Acidovorax ebreus TPSY] Length = 396 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 77/125 (61%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENPHLWT EF+ + + + +A LE YA +TMP+G +G+ Sbjct: 272 LRDESMHCNFGIDLINQLKLENPHLWTAEFKDEIKALFIKAVELEYRYAEDTMPRGVLGM 331 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 332 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 391 Query: 121 ELKWD 125 L WD Sbjct: 392 ALSWD 396 >gi|317402620|gb|EFV83180.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter xylosoxidans C54] Length = 399 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN +K+ENPHLWT EF+++ R + +A LE AYA +TMP+G +GL Sbjct: 275 LRDESMHCNFGIDLINTVKLENPHLWTPEFREEIRELFRKAVELEYAYAEDTMPRGVLGL 334 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FIANRRC QIG+EPL+ ENPFPWM+E+IDLKKE+NFFETRV EYQ G Sbjct: 335 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 394 Query: 121 ELKWD 125 L W+ Sbjct: 395 TLSWE 399 >gi|297538242|ref|YP_003674011.1| Ribonucleoside-diphosphate reductase [Methylotenera sp. 301] gi|297257589|gb|ADI29434.1| Ribonucleoside-diphosphate reductase [Methylotenera sp. 301] Length = 376 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGIDVIN IK+ENPHLWT EF+++ +T++ + LE YA TMP+G +GL Sbjct: 252 LRDESMHCNFGIDVINTIKLENPHLWTAEFREEIKTLMQKGVELEYQYAEATMPRGVLGL 311 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA ++Y++FIANRRC QIGL+ L+ NPFPWMSE++DLKKEKNFFETRVTEYQ G Sbjct: 312 NATMFKEYLRFIANRRCTQIGLDVLYPGATNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 371 Query: 121 ELKWD 125 L WD Sbjct: 372 ALSWD 376 >gi|192360823|ref|YP_001982048.1| ribonucleotide-diphosphate reductase subunit beta [Cellvibrio japonicus Ueda107] gi|190686988|gb|ACE84666.1| ribonucleoside reductase, beta subunit [Cellvibrio japonicus Ueda107] Length = 429 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 82/125 (65%), Positives = 100/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+ENPHLWT EFQQ+ M+ E T LEI YA ++MP+G +G+ Sbjct: 305 LRDESMHLNFGIDVINQIKLENPHLWTAEFQQEVLQMILEGTELEIQYARDSMPRGVLGM 364 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+ FIANRRC Q+GL+ F +NPFPWMSE++DL+KEKNFFETRV EYQ G Sbjct: 365 NAAMMEEYLHFIANRRCAQLGLKEQFPGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 424 Query: 121 ELKWD 125 L WD Sbjct: 425 ALSWD 429 >gi|113869188|ref|YP_727677.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia eutropha H16] gi|113527964|emb|CAJ94309.1| Ribonucleoside-diphosphate reductase beta subunit [Ralstonia eutropha H16] Length = 395 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 81/125 (64%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL Sbjct: 271 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 330 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FI NRRC QIGL+ LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 331 NAPMFKSYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 390 Query: 121 ELKWD 125 L WD Sbjct: 391 ALSWD 395 >gi|94312018|ref|YP_585228.1| ribonucleotide-diphosphate reductase subunit beta [Cupriavidus metallidurans CH34] gi|93355870|gb|ABF09959.1| Ribonucleoside-diphosphate reductase beta subunit [Cupriavidus metallidurans CH34] Length = 395 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 81/125 (64%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL Sbjct: 271 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 330 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FI NRRC QIGL+ LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 331 NAPMFKGYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 390 Query: 121 ELKWD 125 L WD Sbjct: 391 ALSWD 395 >gi|73542624|ref|YP_297144.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia eutropha JMP134] gi|72120037|gb|AAZ62300.1| Ribonucleoside-diphosphate reductase [Ralstonia eutropha JMP134] Length = 394 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 81/125 (64%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL Sbjct: 270 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 329 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FI NRRC QIGL+ LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 330 NAPMFKSYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 389 Query: 121 ELKWD 125 L WD Sbjct: 390 ALSWD 394 >gi|221202418|ref|ZP_03575450.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia multivorans CGD2M] gi|221208122|ref|ZP_03581127.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia multivorans CGD2] gi|221172025|gb|EEE04467.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia multivorans CGD2] gi|221177695|gb|EEE10110.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia multivorans CGD2M] Length = 372 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 248 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 307 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 308 NASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 367 Query: 121 ELKWD 125 L W+ Sbjct: 368 ALSWE 372 >gi|170695324|ref|ZP_02886470.1| Ribonucleoside-diphosphate reductase [Burkholderia graminis C4D1M] gi|170139724|gb|EDT07906.1| Ribonucleoside-diphosphate reductase [Burkholderia graminis C4D1M] Length = 414 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 78/125 (62%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENP LWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 290 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 349 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 350 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 409 Query: 121 ELKWD 125 L W+ Sbjct: 410 ALTWE 414 >gi|254282900|ref|ZP_04957868.1| ribonucleoside-diphosphate reductase, beta subunit [gamma proteobacterium NOR51-B] gi|219679103|gb|EED35452.1| ribonucleoside-diphosphate reductase, beta subunit [gamma proteobacterium NOR51-B] Length = 421 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+ENPHLWT EFQ++ M+ E T LEI YA +TMP+G +G+ Sbjct: 297 LRDESMHLNFGIDVINQIKLENPHLWTAEFQEEVVQMILEGTQLEIEYARDTMPRGVLGM 356 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+QFI NRR +Q+GL + +NPFPWMSE++DL+KEKNFFETRV EYQ G Sbjct: 357 NAAMMEEYLQFICNRRLNQLGLSEQYPGVQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 416 Query: 121 ELKWD 125 L WD Sbjct: 417 ALTWD 421 >gi|299533977|ref|ZP_07047329.1| ribonucleotide-diphosphate reductase subunit beta [Comamonas testosteroni S44] gi|298717886|gb|EFI58891.1| ribonucleotide-diphosphate reductase subunit beta [Comamonas testosteroni S44] Length = 363 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 78/125 (62%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENPHLWT EF+Q+ + +A LE YA +TMP+G +G+ Sbjct: 239 LRDESMHCNFGIDLINQLKLENPHLWTAEFKQEITELFQKAVELEYRYAEDTMPRGVLGM 298 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 299 NASMFKGYLRYIANRRATQIGLEELFPGEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 358 Query: 121 ELKWD 125 L WD Sbjct: 359 ALSWD 363 >gi|253997287|ref|YP_003049351.1| Ribonucleoside-diphosphate reductase [Methylotenera mobilis JLW8] gi|253983966|gb|ACT48824.1| Ribonucleoside-diphosphate reductase [Methylotenera mobilis JLW8] Length = 377 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGIDVIN IK+ENPHLWT EF+ + + ++ LE YA TMP+G +GL Sbjct: 253 LRDESMHCNFGIDVINTIKLENPHLWTAEFRDEIKGLIQHGVELEYRYAEATMPRGVLGL 312 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA ++Y++FIANRRC QIGL+ L++ NPFPWMSE+IDLKKEKNFFETRVTEYQ G Sbjct: 313 NATMFKEYLRFIANRRCQQIGLDVLYQGATNPFPWMSEMIDLKKEKNFFETRVTEYQTGG 372 Query: 121 ELKWD 125 L WD Sbjct: 373 ALSWD 377 >gi|323527395|ref|YP_004229548.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1001] gi|323384397|gb|ADX56488.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1001] Length = 414 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 78/125 (62%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENP LWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 290 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 349 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 350 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 409 Query: 121 ELKWD 125 L W+ Sbjct: 410 ALTWE 414 >gi|326315613|ref|YP_004233285.1| ribonucleoside-diphosphate reductase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372449|gb|ADX44718.1| Ribonucleoside-diphosphate reductase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 387 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 77/125 (61%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENPHLWT EF+++ + + +A LE YA +TMP+G +G+ Sbjct: 263 LRDESMHCNFGIDLINQLKLENPHLWTAEFKEEIKGLFMKAVELEYQYAEDTMPRGVLGM 322 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 323 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 382 Query: 121 ELKWD 125 L WD Sbjct: 383 ALSWD 387 >gi|221065168|ref|ZP_03541273.1| Ribonucleoside-diphosphate reductase [Comamonas testosteroni KF-1] gi|220710191|gb|EED65559.1| Ribonucleoside-diphosphate reductase [Comamonas testosteroni KF-1] Length = 363 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 78/125 (62%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENPHLWT EF+Q+ + A LE YA +TMP+G +G+ Sbjct: 239 LRDESMHCNFGIDLINQLKLENPHLWTAEFKQEITELFQRAVELEYRYAEDTMPRGVLGM 298 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 299 NASMFKGYLRYIANRRATQIGLEELFPGEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 358 Query: 121 ELKWD 125 L WD Sbjct: 359 ALSWD 363 >gi|121598515|ref|YP_991780.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia mallei SAVP1] gi|124385654|ref|YP_001027273.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia mallei NCTC 10229] gi|126439848|ref|YP_001060484.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia pseudomallei 668] gi|126451145|ref|YP_001082790.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia mallei NCTC 10247] gi|126453692|ref|YP_001067748.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia pseudomallei 1106a] gi|134280207|ref|ZP_01766918.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei 305] gi|166998593|ref|ZP_02264451.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei PRL-20] gi|167721297|ref|ZP_02404533.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia pseudomallei DM98] gi|167740266|ref|ZP_02413040.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia pseudomallei 14] gi|167817486|ref|ZP_02449166.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia pseudomallei 91] gi|167847373|ref|ZP_02472881.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia pseudomallei B7210] gi|167895962|ref|ZP_02483364.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia pseudomallei 7894] gi|167904346|ref|ZP_02491551.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia pseudomallei NCTC 13177] gi|167912606|ref|ZP_02499697.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia pseudomallei 112] gi|217420440|ref|ZP_03451945.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei 576] gi|226196790|ref|ZP_03792369.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei Pakistan 9] gi|237813879|ref|YP_002898330.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei MSHR346] gi|238561262|ref|ZP_00442338.2| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei GB8 horse 4] gi|242316188|ref|ZP_04815204.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei 1106b] gi|254178822|ref|ZP_04885476.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei ATCC 10399] gi|254199038|ref|ZP_04905453.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei S13] gi|254202774|ref|ZP_04909137.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei FMH] gi|254259655|ref|ZP_04950709.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei 1710a] gi|254299327|ref|ZP_04966777.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei 406e] gi|121227325|gb|ABM49843.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei SAVP1] gi|124293674|gb|ABN02943.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei NCTC 10229] gi|126219341|gb|ABN82847.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei 668] gi|126227334|gb|ABN90874.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei 1106a] gi|126244015|gb|ABO07108.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei NCTC 10247] gi|134248214|gb|EBA48297.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei 305] gi|147747021|gb|EDK54098.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei FMH] gi|157808756|gb|EDO85926.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei 406e] gi|160694736|gb|EDP84744.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei ATCC 10399] gi|169656868|gb|EDS88265.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei S13] gi|217395852|gb|EEC35869.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei 576] gi|225931050|gb|EEH27058.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei Pakistan 9] gi|237506031|gb|ACQ98349.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei MSHR346] gi|238524965|gb|EEP88395.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei GB8 horse 4] gi|242139427|gb|EES25829.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei 1106b] gi|243065276|gb|EES47462.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei PRL-20] gi|254218344|gb|EET07728.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei 1710a] Length = 403 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 338 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398 Query: 121 ELKWD 125 L W+ Sbjct: 399 ALSWE 403 >gi|312795100|ref|YP_004028022.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia rhizoxinica HKI 454] gi|312166875|emb|CBW73878.1| Ribonucleoside-diphosphate reductase beta chain (EC 1.17.4.1) [Burkholderia rhizoxinica HKI 454] Length = 416 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT F+++ + A LE YA +TMP+G +GL Sbjct: 292 LRDESMHCNFGIDLINQIKLENPHLWTPAFREEICGLFKHAVELEYRYAEDTMPRGVLGL 351 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIGLEPLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 352 NAGMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 411 Query: 121 ELKWD 125 L W+ Sbjct: 412 ALSWE 416 >gi|311103857|ref|YP_003976710.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter xylosoxidans A8] gi|310758546|gb|ADP13995.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter xylosoxidans A8] Length = 399 Score = 203 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN +K+ENPHLWT EF+++ R + +A LE AYA +TMP+G +GL Sbjct: 275 LRDESMHCNFGIDLINTVKLENPHLWTPEFREEIRELFRKAVELEYAYAEDTMPRGVLGL 334 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FIANRRC QIG+EPL+ ENPFPWM+E+IDLKKE+NFFETRV EYQ G Sbjct: 335 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 394 Query: 121 ELKWD 125 L W+ Sbjct: 395 TLSWE 399 >gi|289208615|ref|YP_003460681.1| ribonucleoside-diphosphate reductase [Thioalkalivibrio sp. K90mix] gi|288944246|gb|ADC71945.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp. K90mix] Length = 412 Score = 203 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 82/125 (65%), Positives = 102/125 (81%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIK+ENPHLWT+EF+ + RT++ +A LE YA +TMP+G +G+ Sbjct: 288 LRDESMHMNFGIDVINQIKVENPHLWTEEFKNEMRTLISDAVELEAQYARDTMPRGVLGM 347 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+ FIANRRC QIGL ++ +NPFPWMSEV+DLKKEKNFFETRVTEYQ G Sbjct: 348 NAQMFEEYLHFIANRRCAQIGLAEMYPGADNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 407 Query: 121 ELKWD 125 L WD Sbjct: 408 ALSWD 412 >gi|83719302|ref|YP_441701.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia thailandensis E264] gi|83653127|gb|ABC37190.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia thailandensis E264] Length = 377 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL Sbjct: 253 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 312 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 313 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 372 Query: 121 ELKWD 125 L W+ Sbjct: 373 ALSWE 377 >gi|91787004|ref|YP_547956.1| ribonucleotide-diphosphate reductase subunit beta [Polaromonas sp. JS666] gi|91696229|gb|ABE43058.1| Ribonucleoside-diphosphate reductase [Polaromonas sp. JS666] Length = 406 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 78/125 (62%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENPHLWT EF+ + + + +A LE YA +TMP+G +GL Sbjct: 282 LRDESMHCNFGIDLINQLKLENPHLWTAEFKAEIKALFLKAVELEYRYAEDTMPRGVLGL 341 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 342 NASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 401 Query: 121 ELKWD 125 L WD Sbjct: 402 ALSWD 406 >gi|76808925|ref|YP_334881.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia pseudomallei 1710b] gi|254208116|ref|ZP_04914466.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei JHU] gi|76578378|gb|ABA47853.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia pseudomallei 1710b] gi|147752010|gb|EDK59077.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei JHU] Length = 376 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL Sbjct: 252 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 311 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 312 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 371 Query: 121 ELKWD 125 L W+ Sbjct: 372 ALSWE 376 >gi|82703584|ref|YP_413150.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosospira multiformis ATCC 25196] gi|82411649|gb|ABB75758.1| Ribonucleoside-diphosphate reductase [Nitrosospira multiformis ATCC 25196] Length = 408 Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats. Identities = 81/125 (64%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGIDV+NQIK+ENPHLWTKEF+ + ++ +A LE YA +TMP+G +GL Sbjct: 284 LRDESMHCNFGIDVVNQIKMENPHLWTKEFRSEISALMQKAVELEYRYAEDTMPRGVLGL 343 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP ++Y+++IANRRC QIGL+ L+ NPFPWMSE+IDLKKEKNFFETRVTEYQ G Sbjct: 344 NAPMFKEYLRYIANRRCQQIGLDILYPGASNPFPWMSEMIDLKKEKNFFETRVTEYQTGG 403 Query: 121 ELKWD 125 L WD Sbjct: 404 VLNWD 408 >gi|319791701|ref|YP_004153341.1| ribonucleoside-diphosphate reductase [Variovorax paradoxus EPS] gi|315594164|gb|ADU35230.1| Ribonucleoside-diphosphate reductase [Variovorax paradoxus EPS] Length = 411 Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats. Identities = 76/125 (60%), Positives = 95/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENP LWT EF+ + + + A LE YA +TMP+G +G+ Sbjct: 287 LRDESMHCNFGIDLINQLKLENPGLWTPEFKAEIKDLFMRAVELEYKYAEDTMPRGVLGM 346 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 347 NASMFKGYLRYIANRRAQQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 406 Query: 121 ELKWD 125 L WD Sbjct: 407 ALSWD 411 >gi|307546480|ref|YP_003898959.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas elongata DSM 2581] gi|307218504|emb|CBV43774.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas elongata DSM 2581] Length = 415 Score = 202 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 82/125 (65%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFG+D+INQIKIENPHLWT EFQ + M+ E T LEIAYA ++MP+G +G+ Sbjct: 291 LRDESMHLNFGVDMINQIKIENPHLWTPEFQDECTQMILEGTELEIAYARDSMPRGVLGM 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+ FI NRR QIGL+ F +NPFPWMSE+IDL+KEKNFFETRVTEYQ G Sbjct: 351 NAAIMEEYLHFICNRRLAQIGLKEQFPGAQNPFPWMSEIIDLRKEKNFFETRVTEYQVGG 410 Query: 121 ELKWD 125 L WD Sbjct: 411 ALSWD 415 >gi|293603286|ref|ZP_06685715.1| ribonucleotide-diphosphate reductase subunit beta subunit [Achromobacter piechaudii ATCC 43553] gi|292818321|gb|EFF77373.1| ribonucleotide-diphosphate reductase subunit beta subunit [Achromobacter piechaudii ATCC 43553] Length = 398 Score = 202 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 78/125 (62%), Positives = 100/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN +K+ENPHLWT F+++ R + +A LE AYA +TMP+G +GL Sbjct: 274 LRDESMHCNFGIDLINTVKLENPHLWTPAFREEIRELFRKAVELEYAYAEDTMPRGVLGL 333 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FIANRRC QIG+EPL+ ENPFPWM+E+IDLKKE+NFFETRV EYQ G Sbjct: 334 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 393 Query: 121 ELKWD 125 L W+ Sbjct: 394 TLSWE 398 >gi|149927167|ref|ZP_01915424.1| ribonucleotide-diphosphate reductase beta subunit [Limnobacter sp. MED105] gi|149824106|gb|EDM83327.1| ribonucleotide-diphosphate reductase beta subunit [Limnobacter sp. MED105] Length = 399 Score = 202 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 74/125 (59%), Positives = 94/125 (75%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES H FGID+IN +K+ENPHLWT EF+++ + M +A LE AYA +TMP+G +GL Sbjct: 275 LRDESAHCTFGIDLINTVKLENPHLWTPEFKEEIKAMFRKAVELEHAYAVDTMPRGVLGL 334 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 N+ +YM+FI NRR +QIGL L++ NPFPWMSE++DLKKE NFFE RVTEYQ G Sbjct: 335 NSAQFMEYMKFICNRRSNQIGLGTLYEGATNPFPWMSEMMDLKKETNFFERRVTEYQTGG 394 Query: 121 ELKWD 125 L WD Sbjct: 395 ALSWD 399 >gi|299065648|emb|CBJ36820.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Ralstonia solanacearum CMR15] Length = 398 Score = 202 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL Sbjct: 274 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 333 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FI NRRC QIGL+ LF +NPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 334 NAPMFKGYLRFICNRRCQQIGLDALFPNEDNPFPWMSEMIDLKKERNFFETRVIEYQTGG 393 Query: 121 ELKWD 125 L WD Sbjct: 394 ALSWD 398 >gi|17547523|ref|NP_520925.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia solanacearum GMI1000] gi|17429827|emb|CAD16511.1| putative transmembrane ribonucleoside reductase (small chain) oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 400 Score = 202 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL Sbjct: 276 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 335 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FI NRRC QIGL+ LF +NPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 336 NAPMFKGYLRFICNRRCQQIGLDALFPNEDNPFPWMSEMIDLKKERNFFETRVIEYQTGG 395 Query: 121 ELKWD 125 L WD Sbjct: 396 ALSWD 400 >gi|167586060|ref|ZP_02378448.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia ubonensis Bu] Length = 403 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVDLEYRYAEDTMPRGVLGL 338 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 339 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398 Query: 121 ELKWD 125 L W+ Sbjct: 399 ALSWE 403 >gi|167574685|ref|ZP_02367559.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia oklahomensis C6786] Length = 369 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL Sbjct: 245 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 304 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 305 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 364 Query: 121 ELKWD 125 L W+ Sbjct: 365 ALSWE 369 >gi|88705571|ref|ZP_01103281.1| ribonucleoside-diphosphate reductase, beta subunit [Congregibacter litoralis KT71] gi|88700084|gb|EAQ97193.1| ribonucleoside-diphosphate reductase, beta subunit [Congregibacter litoralis KT71] Length = 469 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 82/125 (65%), Positives = 100/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+ENP LWT+EF+Q++ M+ E T LEI YA +TMP+G +G+ Sbjct: 345 LRDESMHLNFGIDVINQIKLENPQLWTEEFKQEAIQMILEGTQLEIEYARDTMPRGVLGM 404 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+QFIANRR QIGL F +NPFPWMSE++DL+KEKNFFETRV EYQ G Sbjct: 405 NAAMMEEYLQFIANRRLSQIGLPEQFPGVQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 464 Query: 121 ELKWD 125 L WD Sbjct: 465 ALSWD 469 >gi|264680215|ref|YP_003280125.1| ribonucleotide reductase [Comamonas testosteroni CNB-2] gi|262210731|gb|ACY34829.1| ribonucleotide reductase [Comamonas testosteroni CNB-2] Length = 336 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 78/125 (62%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENPHLWT EF+Q+ + +A LE YA +TMP+G +G+ Sbjct: 212 LRDESMHCNFGIDLINQLKLENPHLWTAEFKQEITELFQKAVELEYRYAEDTMPRGVLGM 271 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 272 NASMFKGYLRYIANRRATQIGLEELFPGEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 331 Query: 121 ELKWD 125 L WD Sbjct: 332 ALSWD 336 >gi|167825888|ref|ZP_02457359.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia pseudomallei 9] gi|167924622|ref|ZP_02511713.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia pseudomallei BCC215] gi|254180586|ref|ZP_04887184.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei 1655] gi|254190977|ref|ZP_04897483.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei Pasteur 52237] gi|157938651|gb|EDO94321.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei Pasteur 52237] gi|184211125|gb|EDU08168.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia pseudomallei 1655] Length = 372 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL Sbjct: 248 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 307 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 308 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 367 Query: 121 ELKWD 125 L W+ Sbjct: 368 ALSWE 372 >gi|254516739|ref|ZP_05128798.1| ribonucleoside-diphosphate reductase, beta subunit [gamma proteobacterium NOR5-3] gi|219675162|gb|EED31529.1| ribonucleoside-diphosphate reductase, beta subunit [gamma proteobacterium NOR5-3] Length = 441 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 83/125 (66%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+ENPHLWT+EF+Q++ M+ E T LEI YA +TMP+G +G+ Sbjct: 317 LRDESMHLNFGIDVINQIKLENPHLWTEEFKQEAIQMILEGTQLEIEYARDTMPRGVLGM 376 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+QFIANRR QIGL F +NPFPWMSE++DL+KEKNFFETRV EYQ G Sbjct: 377 NAAMMEEYLQFIANRRLSQIGLPEQFPGVQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 436 Query: 121 ELKWD 125 L WD Sbjct: 437 ALSWD 441 >gi|194290770|ref|YP_002006677.1| ribonucleotide-diphosphate reductase subunit beta [Cupriavidus taiwanensis LMG 19424] gi|193224605|emb|CAQ70616.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Cupriavidus taiwanensis LMG 19424] Length = 396 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 81/125 (64%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL Sbjct: 272 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 331 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FI NRRC QIGL+ LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 332 NAPMFKSYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 391 Query: 121 ELKWD 125 L WD Sbjct: 392 ALSWD 396 >gi|330983931|gb|EGH82034.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. lachrymans str. M301315] Length = 388 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 81/125 (64%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLWT E ++++ M+ + T LEIAYA +TMP+G +G+ Sbjct: 264 LRDESMHLNFGIDMINQIKIENPHLWTDELKREATVMIIQGTQLEIAYARDTMPRGVLGM 323 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+QFIANRR QIGL ++ +NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 324 NAAMMEEYLQFIANRRLTQIGLPEVYAGAKNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 383 Query: 121 ELKWD 125 L WD Sbjct: 384 ALSWD 388 >gi|239813962|ref|YP_002942872.1| ribonucleotide-diphosphate reductase subunit beta [Variovorax paradoxus S110] gi|239800539|gb|ACS17606.1| Ribonucleoside-diphosphate reductase [Variovorax paradoxus S110] Length = 391 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 76/125 (60%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENP LWT EF+ + + + +A LE YA +TMP+G +G+ Sbjct: 267 LRDESMHCNFGIDLINQLKLENPGLWTPEFKAEIKALFLKAVELEYKYAEDTMPRGVLGM 326 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 327 NASMFKGYLRYIANRRAQQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 386 Query: 121 ELKWD 125 L WD Sbjct: 387 ALSWD 391 >gi|167564160|ref|ZP_02357076.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia oklahomensis EO147] Length = 369 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL Sbjct: 245 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 304 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 305 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 364 Query: 121 ELKWD 125 L W+ Sbjct: 365 ALSWE 369 >gi|254780845|ref|YP_003065258.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Liberibacter asiaticus str. psy62] gi|254780964|ref|YP_003065377.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Liberibacter asiaticus str. psy62] gi|254040522|gb|ACT57318.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Liberibacter asiaticus str. psy62] gi|254040641|gb|ACT57437.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Liberibacter asiaticus str. psy62] Length = 352 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 125/125 (100%), Positives = 125/125 (100%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL Sbjct: 228 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 287 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA Sbjct: 288 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 347 Query: 121 ELKWD 125 ELKWD Sbjct: 348 ELKWD 352 >gi|120609557|ref|YP_969235.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax citrulli AAC00-1] gi|120588021|gb|ABM31461.1| Ribonucleoside-diphosphate reductase [Acidovorax citrulli AAC00-1] Length = 387 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 77/125 (61%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENPHLWT EF+++ + + +A LE YA +TMP+G +G+ Sbjct: 263 LRDESMHCNFGIDLINQLKLENPHLWTAEFKEEIKGLFMKAVELEYQYAEDTMPRGVLGM 322 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 323 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 382 Query: 121 ELKWD 125 L WD Sbjct: 383 ALSWD 387 >gi|72163401|ref|YP_291058.1| ribonucleotide-diphosphate reductase subunit beta [Thermobifida fusca YX] gi|71917133|gb|AAZ57035.1| ribonucleoside-diphosphate reductase [Thermobifida fusca YX] Length = 354 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 91/125 (72%), Positives = 104/125 (83%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLWT+EFQ + RTML EA LE AY ETMP+G +GL Sbjct: 230 LRDESIHLNFGIDVINQIKIENPHLWTEEFQDEVRTMLIEACELEAAYGRETMPRGILGL 289 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CEQYM+FI +RR Q+GL P+F TENPFPWMSE++DLKKEKNFFETRV EYQ G+ Sbjct: 290 NAKLCEQYMRFITDRRAEQLGLAPIFGETENPFPWMSEMMDLKKEKNFFETRVIEYQTGS 349 Query: 121 ELKWD 125 L WD Sbjct: 350 GLSWD 354 >gi|241764092|ref|ZP_04762129.1| Ribonucleoside-diphosphate reductase [Acidovorax delafieldii 2AN] gi|241366556|gb|EER61044.1| Ribonucleoside-diphosphate reductase [Acidovorax delafieldii 2AN] Length = 398 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 77/125 (61%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENPHLWT EF+ + + + A LE YA +TMP+G +G+ Sbjct: 274 LRDESMHCNFGIDLINQLKLENPHLWTAEFKAEIKALFMRAVELEYRYAEDTMPRGVLGM 333 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 334 NASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 393 Query: 121 ELKWD 125 L WD Sbjct: 394 ALSWD 398 >gi|226940720|ref|YP_002795794.1| ribonucleotide-diphosphate reductase subunit beta [Laribacter hongkongensis HLHK9] gi|226715647|gb|ACO74785.1| Ribonucleoside-diphosphate reductase beta chain [Laribacter hongkongensis HLHK9] Length = 357 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 83/125 (66%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN IK ENPHLWT EFQ++ + +A LE AYA +TMP+G +GL Sbjct: 233 LRDESMHCNFGIDLINSIKQENPHLWTVEFQEELYGLFRKAIDLEYAYAEDTMPRGVLGL 292 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA ++Y+ FIANRR QIGLEPLF + +NPFPWMSE+IDLKKEKNFFETRVTEYQ G Sbjct: 293 NAAMFKEYLDFIANRRMQQIGLEPLFTHVDNPFPWMSEMIDLKKEKNFFETRVTEYQSGG 352 Query: 121 ELKWD 125 L WD Sbjct: 353 ALDWD 357 >gi|226945386|ref|YP_002800459.1| ribonucleotide-diphosphate reductase subunit beta [Azotobacter vinelandii DJ] gi|226720313|gb|ACO79484.1| Ribonucleoside-diphosphate reductase beta subunit [Azotobacter vinelandii DJ] Length = 416 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 78/125 (62%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLW E + ++ M+ + T LEI YA +TMP+G +G+ Sbjct: 292 LRDESMHLNFGIDMINQIKIENPHLWDAEMKDEATQMILQGTQLEIEYARDTMPRGVLGM 351 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR Q+GL + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 352 NATMMEDYLKFIANRRLSQLGLPEQYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411 Query: 121 ELKWD 125 L WD Sbjct: 412 ALSWD 416 >gi|332526550|ref|ZP_08402662.1| ribonucleotide-diphosphate reductase subunit beta [Rubrivivax benzoatilyticus JA2] gi|332110818|gb|EGJ10995.1| ribonucleotide-diphosphate reductase subunit beta [Rubrivivax benzoatilyticus JA2] Length = 385 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 76/125 (60%), Positives = 94/125 (75%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENP LWT F+ + R + A LE YA +TMP+G +G+ Sbjct: 261 LRDESMHCNFGIDLINQIKLENPQLWTPAFKAEIRALFERAVELEYRYAEDTMPRGVLGM 320 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV +YQ G Sbjct: 321 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIDYQSGG 380 Query: 121 ELKWD 125 L WD Sbjct: 381 ALSWD 385 >gi|241664219|ref|YP_002982579.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia pickettii 12D] gi|309783064|ref|ZP_07677783.1| ribonucleoside-diphosphate reductase, beta subunit [Ralstonia sp. 5_7_47FAA] gi|240866246|gb|ACS63907.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D] gi|308918172|gb|EFP63850.1| ribonucleoside-diphosphate reductase, beta subunit [Ralstonia sp. 5_7_47FAA] Length = 402 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FI NRRC QIGL+ LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 338 NAPMFKGYLRFICNRRCQQIGLDALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397 Query: 121 ELKWD 125 L W+ Sbjct: 398 ALSWE 402 >gi|89902117|ref|YP_524588.1| ribonucleotide-diphosphate reductase subunit beta [Rhodoferax ferrireducens T118] gi|89346854|gb|ABD71057.1| Ribonucleoside-diphosphate reductase [Rhodoferax ferrireducens T118] Length = 400 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 76/125 (60%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENP LWT EF+ + + + +A LE YA +TMP+G +G+ Sbjct: 276 LRDESMHCNFGIDLINQLKLENPQLWTSEFKAEIKALFEQAVELEYRYAEDTMPRGVLGM 335 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 336 NASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 395 Query: 121 ELKWD 125 L WD Sbjct: 396 ALSWD 400 >gi|331006663|ref|ZP_08329944.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma proteobacterium IMCC1989] gi|330419531|gb|EGG93916.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma proteobacterium IMCC1989] Length = 444 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 78/125 (62%), Positives = 100/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIK+ENPHLWT+EF+ + M+ E T LEIAYA +TMP+G +G+ Sbjct: 320 LRDESMHLNFGIDIINQIKLENPHLWTEEFKAEVTQMVLEGTELEIAYARDTMPRGVLGM 379 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+QFI+NRR Q+GL + +NPFPWMSE++DL+KEKNFFETRV EYQ G Sbjct: 380 NAAMMEEYLQFISNRRLAQLGLTEQYPGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 439 Query: 121 ELKWD 125 L W+ Sbjct: 440 ALTWE 444 >gi|124268397|ref|YP_001022401.1| ribonucleotide-diphosphate reductase subunit beta [Methylibium petroleiphilum PM1] gi|124261172|gb|ABM96166.1| Ribonucleoside-diphosphate reductase [Methylibium petroleiphilum PM1] Length = 403 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 78/125 (62%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENP LWT EF+ + + + +A LE YA +TMP+G +GL Sbjct: 279 LRDESMHCNFGIDLINQIKLENPQLWTAEFKAEIKALFMKAVELEYRYAEDTMPRGVLGL 338 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 339 NASMFKGYLRYIANRRATQIGLEELFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 398 Query: 121 ELKWD 125 L WD Sbjct: 399 ALSWD 403 >gi|90022104|ref|YP_527931.1| ribonucleotide-diphosphate reductase subunit beta [Saccharophagus degradans 2-40] gi|89951704|gb|ABD81719.1| Class Ia ribonucleoside-diphosphate reductase beta subunit [Saccharophagus degradans 2-40] Length = 423 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+ENPHLWT+EFQ +++ M+ E T LEIAYA +TMP+G +G+ Sbjct: 299 LRDESMHLNFGIDVINQIKLENPHLWTEEFQAETKQMILEGTELEIAYARDTMPRGVLGM 358 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+ FIANRR Q+GL + +NPFPWMSE++DL+KEKNFFETRV EYQ G Sbjct: 359 NAAMMEEYLHFIANRRMAQLGLAEAYPGAKNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 418 Query: 121 ELKWD 125 L W+ Sbjct: 419 ALSWE 423 >gi|53720599|ref|YP_109585.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia pseudomallei K96243] gi|53726102|ref|YP_104055.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia mallei ATCC 23344] gi|52211013|emb|CAH37001.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia pseudomallei K96243] gi|52429525|gb|AAU50118.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei ATCC 23344] Length = 350 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL Sbjct: 226 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 285 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 286 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 345 Query: 121 ELKWD 125 L W+ Sbjct: 346 ALSWE 350 >gi|167580513|ref|ZP_02373387.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia thailandensis TXDOH] gi|167618621|ref|ZP_02387252.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia thailandensis Bt4] gi|257137870|ref|ZP_05586132.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia thailandensis E264] Length = 350 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL Sbjct: 226 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 285 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 286 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 345 Query: 121 ELKWD 125 L W+ Sbjct: 346 ALSWE 350 >gi|187930114|ref|YP_001900601.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia pickettii 12J] gi|187727004|gb|ACD28169.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12J] Length = 402 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FI NRRC QIGL+ LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 338 NAPMFKGYLRFICNRRCQQIGLDALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397 Query: 121 ELKWD 125 L W+ Sbjct: 398 ALSWE 402 >gi|293609145|ref|ZP_06691448.1| ribonucleoside-diphosphate reductase [Acinetobacter sp. SH024] gi|292829718|gb|EFF88080.1| ribonucleoside-diphosphate reductase [Acinetobacter sp. SH024] Length = 427 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 79/124 (63%), Positives = 97/124 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+ Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVVQMIVEGTMLEIEYARDTMPRGVLGM 363 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423 Query: 121 ELKW 124 L W Sbjct: 424 ALSW 427 >gi|300690381|ref|YP_003751376.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Ralstonia solanacearum PSI07] gi|299077441|emb|CBJ50067.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Ralstonia solanacearum PSI07] Length = 402 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FI NRRC QIGL+ LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 338 NAPMFKGYLRFICNRRCQQIGLDALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397 Query: 121 ELKWD 125 L W+ Sbjct: 398 ALSWE 402 >gi|171057074|ref|YP_001789423.1| ribonucleotide-diphosphate reductase subunit beta [Leptothrix cholodnii SP-6] gi|170774519|gb|ACB32658.1| Ribonucleoside-diphosphate reductase [Leptothrix cholodnii SP-6] Length = 402 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 77/125 (61%), Positives = 95/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN IK+ENPHLWT F+ + + + +A LE YA +TMP+G +GL Sbjct: 278 LRDESMHCNFGIDLINAIKLENPHLWTPAFKAEIKALFLKAVELEYRYAEDTMPRGVLGL 337 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 338 NASMFKGYLRYIANRRATQIGLEELFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 397 Query: 121 ELKWD 125 L WD Sbjct: 398 ALSWD 402 >gi|134097869|ref|YP_001103530.1| ribonucleotide-diphosphate reductase subunit beta [Saccharopolyspora erythraea NRRL 2338] gi|291007412|ref|ZP_06565385.1| ribonucleotide-diphosphate reductase subunit beta [Saccharopolyspora erythraea NRRL 2338] gi|133910492|emb|CAM00605.1| ribonucleoside-diphosphate reductase, beta subunit [Saccharopolyspora erythraea NRRL 2338] Length = 360 Score = 201 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 90/125 (72%), Positives = 103/125 (82%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID INQIKIENPHLWT EFQ++ RTML EA LE+AY +TMP+G +GL Sbjct: 236 LRDESIHLNFGIDCINQIKIENPHLWTPEFQEEVRTMLTEACELEVAYGRDTMPRGILGL 295 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CE+YM+FI NRRC Q+GLEP+F T NPFPWMSE +DLKKEKNFFETRV EYQ G Sbjct: 296 NAGLCEEYMRFITNRRCAQLGLEPVFPETANPFPWMSEAMDLKKEKNFFETRVIEYQSGG 355 Query: 121 ELKWD 125 L WD Sbjct: 356 ALDWD 360 >gi|325983070|ref|YP_004295472.1| ribonucleoside-diphosphate reductase [Nitrosomonas sp. AL212] gi|325532589|gb|ADZ27310.1| Ribonucleoside-diphosphate reductase [Nitrosomonas sp. AL212] Length = 381 Score = 201 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 78/125 (62%), Positives = 100/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGIDVINQIK+ENP LWTK F+++ ++ +A LE YA +TMP+G +G+ Sbjct: 257 LRDESMHCNFGIDVINQIKMENPQLWTKAFREEIAALMQKAVALEYRYAEDTMPRGVLGM 316 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP ++Y+++IANRRC QIGL+ L+ NPFPWMSE++DLKKEKNFFETRVTEYQ G Sbjct: 317 NAPMFKEYLRYIANRRCQQIGLDTLYPNANNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 376 Query: 121 ELKWD 125 L WD Sbjct: 377 ALSWD 381 >gi|160896947|ref|YP_001562529.1| ribonucleotide-diphosphate reductase subunit beta [Delftia acidovorans SPH-1] gi|160362531|gb|ABX34144.1| Ribonucleoside-diphosphate reductase [Delftia acidovorans SPH-1] Length = 363 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 76/125 (60%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENP LWT EF+++ + +A LE YA +TMP+G +G+ Sbjct: 239 LRDESMHCNFGIDLINQLKLENPQLWTPEFKEEITALFVKAVELEYRYAEDTMPRGVLGM 298 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 299 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 358 Query: 121 ELKWD 125 L WD Sbjct: 359 ALSWD 363 >gi|184157022|ref|YP_001845361.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter baumannii ACICU] gi|183208616|gb|ACC56014.1| Ribonucleotide reductase, beta subunit [Acinetobacter baumannii ACICU] Length = 427 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 79/124 (63%), Positives = 97/124 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+ Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423 Query: 121 ELKW 124 L W Sbjct: 424 ALSW 427 >gi|169797064|ref|YP_001714857.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter baumannii AYE] gi|213156529|ref|YP_002318190.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter baumannii AB0057] gi|215484526|ref|YP_002326761.1| ribonucleotide-diphosphate reductase small chain [Acinetobacter baumannii AB307-0294] gi|239501302|ref|ZP_04660612.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter baumannii AB900] gi|260555643|ref|ZP_05827863.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter baumannii ATCC 19606] gi|301345633|ref|ZP_07226374.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter baumannii AB056] gi|301512780|ref|ZP_07238017.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter baumannii AB058] gi|301596291|ref|ZP_07241299.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter baumannii AB059] gi|169149991|emb|CAM87885.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter baumannii AYE] gi|193076530|gb|ABO11186.2| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter baumannii ATCC 17978] gi|213055689|gb|ACJ40591.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter baumannii AB0057] gi|213987168|gb|ACJ57467.1| ribonucleotide-diphosphate reductase small chain [Acinetobacter baumannii AB307-0294] gi|260410554|gb|EEX03852.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter baumannii ATCC 19606] Length = 427 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 79/124 (63%), Positives = 97/124 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+ Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423 Query: 121 ELKW 124 L W Sbjct: 424 ALSW 427 >gi|260551040|ref|ZP_05825245.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter sp. RUH2624] gi|260405988|gb|EEW99475.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter sp. RUH2624] Length = 427 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 79/124 (63%), Positives = 97/124 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+ Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423 Query: 121 ELKW 124 L W Sbjct: 424 ALSW 427 >gi|110635036|ref|YP_675244.1| ribonucleotide-diphosphate reductase subunit beta [Mesorhizobium sp. BNC1] gi|110286020|gb|ABG64079.1| ribonucleotide reductase [Chelativorans sp. BNC1] Length = 369 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 91/125 (72%), Positives = 102/125 (81%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK ENPHLWT EFQ++ R ML +A LE AY +TMP+GF+GL Sbjct: 245 LRDESIHLNFGIDVINQIKHENPHLWTPEFQEELRRMLKDAAELEAAYGRDTMPRGFLGL 304 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CEQYM FIANRRC Q+GL P+F TENPFPWMSE +DLKKEKNFFETRV EYQ G Sbjct: 305 NAGQCEQYMHFIANRRCAQLGLPPVFPETENPFPWMSEAMDLKKEKNFFETRVIEYQNGG 364 Query: 121 ELKWD 125 L WD Sbjct: 365 ALSWD 369 >gi|291615085|ref|YP_003525242.1| ribonucleoside-diphosphate reductase [Sideroxydans lithotrophicus ES-1] gi|291585197|gb|ADE12855.1| Ribonucleoside-diphosphate reductase [Sideroxydans lithotrophicus ES-1] Length = 382 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 78/125 (62%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFG+DVINQIK+ENPHLWT F+++ R ++ + LE YA +TMP+G +GL Sbjct: 258 LRDESMHLNFGVDVINQIKLENPHLWTPAFREEVRGLIQKGVELEYRYAEDTMPRGVLGL 317 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA ++Y++FIANRRC QIG++ L++ NPFPWM+E+IDLKKEKNFFETRVTEYQ G Sbjct: 318 NAGMFKEYLRFIANRRCQQIGVDMLYQGATNPFPWMAEMIDLKKEKNFFETRVTEYQTGG 377 Query: 121 ELKWD 125 L WD Sbjct: 378 ALSWD 382 >gi|330811278|ref|YP_004355740.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379386|gb|AEA70736.1| Ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 415 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L WD Sbjct: 411 ALSWD 415 >gi|70731866|ref|YP_261608.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas fluorescens Pf-5] gi|68346165|gb|AAY93771.1| ribonucleoside-diphosphate reductase, beta subunit, putative [Pseudomonas fluorescens Pf-5] Length = 415 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L WD Sbjct: 411 ALSWD 415 >gi|262373382|ref|ZP_06066661.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter junii SH205] gi|262313407|gb|EEY94492.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter junii SH205] Length = 427 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 79/124 (63%), Positives = 97/124 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+ Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423 Query: 121 ELKW 124 L W Sbjct: 424 ALSW 427 >gi|74317993|ref|YP_315733.1| ribonucleotide-diphosphate reductase subunit beta [Thiobacillus denitrificans ATCC 25259] gi|74057488|gb|AAZ97928.1| ribonucleoside-diphosphate reductase beta chain [Thiobacillus denitrificans ATCC 25259] Length = 376 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 77/125 (61%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN IK ENPHLWT EF+ + RT++ + LE YA +TMP+G +GL Sbjct: 252 LRDESMHCNFGIDLINTIKQENPHLWTSEFKAEIRTLIQKGVELEFRYAEDTMPRGVLGL 311 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 N+ ++Y++FI+NRRC QIGL+ +F NPFPWM+E+IDLKKEKNFFETRVTEYQ G Sbjct: 312 NSAQFKEYLRFISNRRCQQIGLDEMFPGVSNPFPWMAEMIDLKKEKNFFETRVTEYQTGG 371 Query: 121 ELKWD 125 L WD Sbjct: 372 ALSWD 376 >gi|169634186|ref|YP_001707922.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter baumannii SDF] gi|169152978|emb|CAP02026.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter baumannii] Length = 427 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 79/124 (63%), Positives = 97/124 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+ Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423 Query: 121 ELKW 124 L W Sbjct: 424 ALSW 427 >gi|329902475|ref|ZP_08273120.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Oxalobacteraceae bacterium IMCC9480] gi|327548767|gb|EGF33404.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Oxalobacteraceae bacterium IMCC9480] Length = 416 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 78/125 (62%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID++N IK+ENPHLWT EF+ + + + A LE YA +TMP+G +GL Sbjct: 292 LRDESMHCNFGIDLVNTIKMENPHLWTPEFRDEIKALFLTAVELEYRYAEDTMPRGVLGL 351 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FIANRR QIGLEP+F+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 352 NAPMFKGYLRFIANRRAQQIGLEPMFENEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 411 Query: 121 ELKWD 125 L W+ Sbjct: 412 ALSWE 416 >gi|329893650|ref|ZP_08269784.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma proteobacterium IMCC3088] gi|328923577|gb|EGG30889.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma proteobacterium IMCC3088] Length = 432 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+ENPHLWT++FQ++ ML E T +EI YA +TMP+G +G+ Sbjct: 308 LRDESMHLNFGIDVINQIKLENPHLWTEDFQKEVIQMLLEGTQIEIEYARDTMPRGVLGM 367 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+QFI NRR Q+GL F +NPFPWMSE++DL+KEKNFFETRV EYQ G Sbjct: 368 NAAMMEEYLQFICNRRLAQLGLPEQFPGVQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 427 Query: 121 ELKWD 125 L WD Sbjct: 428 ALSWD 432 >gi|53804295|ref|YP_114081.1| ribonucleotide-diphosphate reductase subunit beta [Methylococcus capsulatus str. Bath] gi|53758056|gb|AAU92347.1| ribonucleoside-diphosphate reductase, beta subunit [Methylococcus capsulatus str. Bath] Length = 403 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 83/125 (66%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDES+H+NFGIDVINQIK+ENPHLWT F+ + M+ EA +E YA++TMP+G +GL Sbjct: 279 MRDESMHMNFGIDVINQIKVENPHLWTDGFKVEMVQMIREAVDIETQYAYDTMPRGILGL 338 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP ++Y+QFIANRRC QIGL + NPFPWMSEV+DLKKEKNFFETRVTEYQ G Sbjct: 339 NAPMFKEYLQFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 398 Query: 121 ELKWD 125 L WD Sbjct: 399 TLSWD 403 >gi|158341282|ref|YP_001522354.1| ribonucleotide-diphosphate reductase subunit beta [Acaryochloris marina MBIC11017] gi|158311523|gb|ABW33134.1| ribonucleoside-diphosphate reductase, beta subunit [Acaryochloris marina MBIC11017] Length = 384 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 76/125 (60%), Positives = 95/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID++N IK ENPHLWT EF ++ R + A LE YA +TMP+G +GL Sbjct: 260 LRDESMHCNFGIDLVNAIKQENPHLWTPEFCEEIRDLFKRAVELEYRYAEDTMPRGVLGL 319 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGL+P+F ENPFPWMSE++DLKKE+NFFETRV EYQ G Sbjct: 320 NASMFKSYLRYIANRRSQQIGLDPIFASEENPFPWMSEMVDLKKERNFFETRVLEYQTGG 379 Query: 121 ELKWD 125 L WD Sbjct: 380 ALSWD 384 >gi|50083944|ref|YP_045454.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter sp. ADP1] gi|49529920|emb|CAG67632.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter sp. ADP1] Length = 427 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 78/124 (62%), Positives = 98/124 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGID+INQIKIENPHLWT EFQQ+ M+ E TLLEI YA +TMP+G +G+ Sbjct: 304 LRDESMHVNFGIDMINQIKIENPHLWTAEFQQEVIQMIVEGTLLEIEYARDTMPRGVLGM 363 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL ++ NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 364 NAAMMEEYLKFICNRRLAQLGLPEQYRGVNNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423 Query: 121 ELKW 124 L W Sbjct: 424 ALSW 427 >gi|292490774|ref|YP_003526213.1| ribonucleoside-diphosphate reductase [Nitrosococcus halophilus Nc4] gi|291579369|gb|ADE13826.1| Ribonucleoside-diphosphate reductase [Nitrosococcus halophilus Nc4] Length = 415 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 85/125 (68%), Positives = 102/125 (81%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDES+H+NFGIDVINQIKIENPHLWT F+Q++ M+ EA LE YA++TMP+G +GL Sbjct: 291 MRDESMHMNFGIDVINQIKIENPHLWTDSFKQETIQMIREAVSLETQYAYDTMPRGVLGL 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP ++Y++FIANRRC QIGL + NPFPWMSE++DLKKEKNFFETRVTEYQ G Sbjct: 351 NAPMFDEYLKFIANRRCAQIGLPEQYPGASNPFPWMSEILDLKKEKNFFETRVTEYQTGG 410 Query: 121 ELKWD 125 LKWD Sbjct: 411 ALKWD 415 >gi|134095932|ref|YP_001101007.1| ribonucleotide-diphosphate reductase subunit beta [Herminiimonas arsenicoxydans] gi|133739835|emb|CAL62886.1| Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide reductase small subunit) [Herminiimonas arsenicoxydans] Length = 395 Score = 199 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 78/125 (62%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN IK+ENPHLWT +F+ + + + A LE YA +TMP+G +GL Sbjct: 271 LRDESMHCNFGIDLINTIKLENPHLWTPQFRDEIKALFLRAVELEYRYAEDTMPRGVLGL 330 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FIANRR QIGLEP+F+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 331 NAPMFKGYLRFIANRRAQQIGLEPMFEQEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 390 Query: 121 ELKWD 125 L W+ Sbjct: 391 ALNWE 395 >gi|332872596|ref|ZP_08440564.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter baumannii 6014059] gi|332739125|gb|EGJ69984.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter baumannii 6014059] Length = 440 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 79/124 (63%), Positives = 97/124 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+ Sbjct: 317 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 376 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 377 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 436 Query: 121 ELKW 124 L W Sbjct: 437 ALSW 440 >gi|332852155|ref|ZP_08433982.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter baumannii 6013150] gi|332867554|ref|ZP_08437707.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter baumannii 6013113] gi|332729527|gb|EGJ60866.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter baumannii 6013150] gi|332733971|gb|EGJ65116.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter baumannii 6013113] Length = 440 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 79/124 (63%), Positives = 97/124 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+ Sbjct: 317 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 376 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 377 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 436 Query: 121 ELKW 124 L W Sbjct: 437 ALSW 440 >gi|330892405|gb|EGH25066.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. mori str. 301020] Length = 415 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L WD Sbjct: 411 ALSWD 415 >gi|66046950|ref|YP_236791.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. syringae B728a] gi|237798938|ref|ZP_04587399.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. oryzae str. 1_6] gi|237806191|ref|ZP_04592895.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. oryzae str. 1_6] gi|63257657|gb|AAY38753.1| Ribonucleoside-diphosphate reductase [Pseudomonas syringae pv. syringae B728a] gi|330980156|gb|EGH78342.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. aptata str. DSM 50252] gi|331021792|gb|EGI01849.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027304|gb|EGI07359.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. oryzae str. 1_6] Length = 415 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L WD Sbjct: 411 ALSWD 415 >gi|28868867|ref|NP_791486.1| ribonucleoside-diphosphate reductase subunit beta [Pseudomonas syringae pv. tomato str. DC3000] gi|213969520|ref|ZP_03397656.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas syringae pv. tomato T1] gi|301385974|ref|ZP_07234392.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. tomato Max13] gi|302058701|ref|ZP_07250242.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. tomato K40] gi|302134408|ref|ZP_07260398.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28852106|gb|AAO55181.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas syringae pv. tomato str. DC3000] gi|213925616|gb|EEB59175.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas syringae pv. tomato T1] gi|330960626|gb|EGH60886.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. maculicola str. ES4326] gi|331016758|gb|EGH96814.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 415 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L WD Sbjct: 411 ALSWD 415 >gi|255019898|ref|ZP_05291973.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Acidithiobacillus caldus ATCC 51756] gi|254970678|gb|EET28165.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Acidithiobacillus caldus ATCC 51756] Length = 374 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 74/125 (59%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENP LWT+ FQ++ +++ + LE AYA +TMP+G +GL Sbjct: 250 LRDESMHCNFGIDLINQIKVENPDLWTEPFQEEIVSLIRKGVELECAYADDTMPRGVLGL 309 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y+++I NRR Q+GL + +NPFPWMSE++DLKKEKNFFETRVTEYQ G Sbjct: 310 NAPIFKDYVKYIGNRRLQQLGLPVQWAGIQNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 369 Query: 121 ELKWD 125 L WD Sbjct: 370 ALSWD 374 >gi|320323423|gb|EFW79511.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. glycinea str. B076] gi|320327620|gb|EFW83632.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. glycinea str. race 4] gi|330876273|gb|EGH10422.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. glycinea str. race 4] Length = 415 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L WD Sbjct: 411 ALSWD 415 >gi|312960686|ref|ZP_07775192.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas fluorescens WH6] gi|311285212|gb|EFQ63787.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas fluorescens WH6] Length = 416 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 352 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411 Query: 121 ELKWD 125 L WD Sbjct: 412 ALSWD 416 >gi|71737432|ref|YP_275887.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. phaseolicola 1448A] gi|257485935|ref|ZP_05639976.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289628680|ref|ZP_06461634.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648392|ref|ZP_06479735.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. aesculi str. 2250] gi|298487941|ref|ZP_07005980.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|302184861|ref|ZP_07261534.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. syringae 642] gi|71557985|gb|AAZ37196.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157492|gb|EFH98573.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330866023|gb|EGH00732.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330896997|gb|EGH28545.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. japonica str. M301072PT] gi|330986742|gb|EGH84845.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010341|gb|EGH90397.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 415 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L WD Sbjct: 411 ALSWD 415 >gi|209885874|ref|YP_002289731.1| ribonucleoside-diphosphate reductase, beta subunit [Oligotropha carboxidovorans OM5] gi|209874070|gb|ACI93866.1| ribonucleoside-diphosphate reductase, beta subunit [Oligotropha carboxidovorans OM5] Length = 377 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 92/125 (73%), Positives = 102/125 (81%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+ENPHLWTK FQ + R M+ EA LE AY +TMP+GF+GL Sbjct: 253 LRDESIHLNFGIDVINQIKLENPHLWTKAFQDEVRGMISEAAGLEAAYGRDTMPRGFLGL 312 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CEQYM FIANRRC QIGL P+F TENPFPWMSE +DLKKEKNFFETRV EYQ G Sbjct: 313 NAALCEQYMHFIANRRCAQIGLAPVFAETENPFPWMSEAMDLKKEKNFFETRVIEYQNGG 372 Query: 121 ELKWD 125 L WD Sbjct: 373 ALSWD 377 >gi|119504228|ref|ZP_01626308.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma proteobacterium HTCC2080] gi|119459736|gb|EAW40831.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma proteobacterium HTCC2080] Length = 419 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 82/125 (65%), Positives = 100/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+ENP LWT EFQQ++ M+ E T LEIAYA +TMP+G +G+ Sbjct: 295 LRDESMHLNFGIDVINQIKLENPLLWTPEFQQEAIQMILEGTELEIAYARDTMPRGVLGM 354 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+QFI NRR +Q+GL F +NPFPWMSE++DL+KEKNFFETRV EYQ G Sbjct: 355 NAAMMEEYLQFICNRRLNQVGLPEQFPGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 414 Query: 121 ELKWD 125 L WD Sbjct: 415 ALTWD 419 >gi|54294662|ref|YP_127077.1| ribonucleotide-diphosphate reductase subunit beta [Legionella pneumophila str. Lens] gi|53754494|emb|CAH15978.1| hypothetical protein lpl1739 [Legionella pneumophila str. Lens] Length = 367 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 95/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIKIENPHLWT EF+ + ++ E LE YA +TMP G +G+ Sbjct: 241 LRDESMHMNFGIDVINQIKIENPHLWTPEFKNEIIQLIREGVELEYQYARDTMPHGILGM 300 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+ FIANRR +QIGL + ENPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 301 NAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFFETRVIEYQAGG 360 Query: 121 ELKWD 125 L WD Sbjct: 361 TLSWD 365 >gi|121606275|ref|YP_983604.1| ribonucleotide-diphosphate reductase subunit beta [Polaromonas naphthalenivorans CJ2] gi|120595244|gb|ABM38683.1| Ribonucleoside-diphosphate reductase [Polaromonas naphthalenivorans CJ2] Length = 387 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 77/125 (61%), Positives = 95/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENP LWT EF+ + + +A LE YA +TMP+G +GL Sbjct: 263 LRDESMHCNFGIDLINQLKLENPQLWTAEFKAEINALFMKAVELEYRYAEDTMPRGVLGL 322 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 323 NASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 382 Query: 121 ELKWD 125 L WD Sbjct: 383 ALSWD 387 >gi|148546452|ref|YP_001266554.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas putida F1] gi|148510510|gb|ABQ77370.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida F1] Length = 415 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 351 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L WD Sbjct: 411 ALSWD 415 >gi|319764328|ref|YP_004128265.1| ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans BC] gi|330826374|ref|YP_004389677.1| ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans K601] gi|317118889|gb|ADV01378.1| Ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans BC] gi|329311746|gb|AEB86161.1| Ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans K601] Length = 396 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 74/125 (59%), Positives = 95/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQ+K+ENP LWT F+ + + + +A LE YA +TMP+G +G+ Sbjct: 272 LRDESMHCNFGIDLINQLKLENPQLWTPAFKDEIKGLFLKAVDLEYRYAEDTMPRGVLGM 331 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGL+ LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 332 NASMFKGYLRYIANRRATQIGLDALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 391 Query: 121 ELKWD 125 L WD Sbjct: 392 ALSWD 396 >gi|330880140|gb|EGH14289.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330966559|gb|EGH66819.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. actinidiae str. M302091] Length = 415 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L WD Sbjct: 411 ALSWD 415 >gi|229590245|ref|YP_002872364.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas fluorescens SBW25] gi|229362111|emb|CAY49013.1| putative ribonucleoside-diphosphate reductase beta chain [Pseudomonas fluorescens SBW25] Length = 416 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 352 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411 Query: 121 ELKWD 125 L WD Sbjct: 412 ALSWD 416 >gi|54297688|ref|YP_124057.1| ribonucleotide-diphosphate reductase subunit beta [Legionella pneumophila str. Paris] gi|53751473|emb|CAH12891.1| hypothetical protein lpp1739 [Legionella pneumophila str. Paris] Length = 367 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 95/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIKIENPHLWT EF+ + ++ E LE YA +TMP G +G+ Sbjct: 241 LRDESMHMNFGIDVINQIKIENPHLWTPEFKNEIIQLIREGVELEYQYARDTMPHGILGM 300 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+ FIANRR +QIGL + ENPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 301 NAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFFETRVIEYQAGG 360 Query: 121 ELKWD 125 L WD Sbjct: 361 TLSWD 365 >gi|300113307|ref|YP_003759882.1| ribonucleoside-diphosphate reductase [Nitrosococcus watsonii C-113] gi|299539244|gb|ADJ27561.1| Ribonucleoside-diphosphate reductase [Nitrosococcus watsonii C-113] Length = 412 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 85/125 (68%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDES+H+NFGIDVINQIK+ENPHLW+ F+Q++ M+ EA LE YAH+TMP+G +GL Sbjct: 288 MRDESMHMNFGIDVINQIKLENPHLWSDSFKQETLRMIQEAVSLETQYAHDTMPRGVLGL 347 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP E+Y++FIANRRC QIGL + NPFPWMSEV+DLKKEKNFFETRVTEYQ G Sbjct: 348 NAPMFEEYLKFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 407 Query: 121 ELKWD 125 L WD Sbjct: 408 ALSWD 412 >gi|167837963|ref|ZP_02464822.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia thailandensis MSMB43] Length = 303 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL Sbjct: 179 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 238 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 239 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 298 Query: 121 ELKWD 125 L W+ Sbjct: 299 ALSWE 303 >gi|327480258|gb|AEA83568.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas stutzeri DSM 4166] Length = 415 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLW E + ++ M+ + T LEI YA +TMP+G +G+ Sbjct: 291 LRDESMHLNFGIDMINQIKIENPHLWNAEMKDEATQMILQGTQLEIEYARDTMPRGVLGM 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 351 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L WD Sbjct: 411 ALSWD 415 >gi|254496936|ref|ZP_05109775.1| ribonucleotide-diphosphate reductase subunit beta [Legionella drancourtii LLAP12] gi|254353845|gb|EET12541.1| ribonucleotide-diphosphate reductase subunit beta [Legionella drancourtii LLAP12] Length = 369 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 77/125 (61%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIKIENPHLWT EF+++ ++ + +E YA +TMP G +G+ Sbjct: 240 LRDESMHMNFGIDVINQIKIENPHLWTPEFKEEIIQLIKDGVAMEYQYAKDTMPHGILGM 299 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+ FIANRR +QIGL + ENPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 300 NAEMFEEYLHFIANRRLNQIGLPEQYPGAENPFPWMSEMMDLKKEKNFFETRVIEYQAGG 359 Query: 121 ELKWD 125 L WD Sbjct: 360 TLSWD 364 >gi|229592166|ref|YP_002874285.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas fluorescens SBW25] gi|229364032|emb|CAY51597.1| ribonucleoside-diphosphate reductase beta chain [Pseudomonas fluorescens SBW25] Length = 416 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 352 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411 Query: 121 ELKWD 125 L WD Sbjct: 412 ALSWD 416 >gi|254483523|ref|ZP_05096750.1| ribonucleoside-diphosphate reductase, beta subunit [marine gamma proteobacterium HTCC2148] gi|214036244|gb|EEB76924.1| ribonucleoside-diphosphate reductase, beta subunit [marine gamma proteobacterium HTCC2148] Length = 425 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+ENP+LWT+ FQQ+ M+ E T +EI YA +TMP+G +G+ Sbjct: 301 LRDESMHLNFGIDVINQIKLENPNLWTETFQQEVIQMILEGTEIEIQYARDTMPRGVLGM 360 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+ FIANRR Q+GL F +NPFPWMSE++DL+KEKNFFETRV EYQ G Sbjct: 361 NAAIMEEYLHFIANRRLSQLGLPEQFAGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 420 Query: 121 ELKWD 125 L WD Sbjct: 421 ALSWD 425 >gi|255318309|ref|ZP_05359544.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter radioresistens SK82] gi|262379054|ref|ZP_06072210.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter radioresistens SH164] gi|255304621|gb|EET83803.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter radioresistens SK82] gi|262298511|gb|EEY86424.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter radioresistens SH164] Length = 427 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 79/124 (63%), Positives = 98/124 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+ Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEIIQMILEGTMLEIEYARDTMPRGVLGM 363 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR +Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 364 NAAMMEEYLKFICNRRLNQLGLPEQFAGVNNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423 Query: 121 ELKW 124 L W Sbjct: 424 ALSW 427 >gi|300309722|ref|YP_003773814.1| transmembrane ribonucleoside reductase small subunit [Herbaspirillum seropedicae SmR1] gi|300072507|gb|ADJ61906.1| transmembrane ribonucleoside reductase (small chain) protein [Herbaspirillum seropedicae SmR1] Length = 388 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 78/125 (62%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN +K+ENPHLWT EF+++ +++ A LE YA +TMP+G +GL Sbjct: 264 LRDESMHCNFGIDLINTVKMENPHLWTPEFREEIKSLFLRAVELEYRYAEDTMPRGVLGL 323 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FIANRR QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 324 NAPMFKSYLRFIANRRAQQIGLDPLFAQEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 383 Query: 121 ELKWD 125 L W+ Sbjct: 384 ALSWE 388 >gi|256822964|ref|YP_003146927.1| Ribonucleoside-diphosphate reductase [Kangiella koreensis DSM 16069] gi|256796503|gb|ACV27159.1| Ribonucleoside-diphosphate reductase [Kangiella koreensis DSM 16069] Length = 421 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 81/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFG+D+INQIK+ENPHLWT EF+Q+ M+ E T LEI YA +TMP+G +G+ Sbjct: 297 LRDESMHLNFGVDIINQIKLENPHLWTAEFKQEVLQMILEGTQLEIEYARDTMPRGVLGM 356 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+QFI NRR Q+GL FK NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 357 NAGMMEEYLQFICNRRLAQLGLPEQFKNVSNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 416 Query: 121 ELKWD 125 L WD Sbjct: 417 ALSWD 421 >gi|261855609|ref|YP_003262892.1| ribonucleoside-diphosphate reductase [Halothiobacillus neapolitanus c2] gi|261836078|gb|ACX95845.1| Ribonucleoside-diphosphate reductase [Halothiobacillus neapolitanus c2] Length = 398 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 88/124 (70%), Positives = 100/124 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDES+H+NFGIDVINQIKIENPHLWT++F+ + ML EA LEIAYA +TMP G +GL Sbjct: 275 MRDESIHMNFGIDVINQIKIENPHLWTEDFKAEVTRMLKEAAELEIAYARDTMPHGLLGL 334 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA C +Y+ FIANRRC+QIGL LF NPFPWMSEVIDLKKEKNFFETRVT+YQ G Sbjct: 335 NAEMCAEYLHFIANRRCNQIGLAELFPGATNPFPWMSEVIDLKKEKNFFETRVTDYQTGG 394 Query: 121 ELKW 124 L W Sbjct: 395 ALNW 398 >gi|254784923|ref|YP_003072351.1| ribonucleotide-diphosphate reductase subunit beta [Teredinibacter turnerae T7901] gi|237687536|gb|ACR14800.1| ribonucleoside-diphosphate reductase [Teredinibacter turnerae T7901] Length = 453 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 79/124 (63%), Positives = 99/124 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+ENPHLWT+ FQQ+ + M+ E T LEI YA +TMP+G +G+ Sbjct: 330 LRDESMHLNFGIDVINQIKLENPHLWTESFQQEVKQMVLEGTELEIGYARDTMPRGVLGM 389 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+ FIANRR Q+GL+ + +NPFPWMSE++DL+KEKNFFETRV EYQ G Sbjct: 390 NAAIMEEYLHFIANRRLAQLGLKEAYPGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 449 Query: 121 ELKW 124 L W Sbjct: 450 ALSW 453 >gi|77165986|ref|YP_344511.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosococcus oceani ATCC 19707] gi|254436303|ref|ZP_05049809.1| ribonucleoside-diphosphate reductase, beta subunit [Nitrosococcus oceani AFC27] gi|76884300|gb|ABA58981.1| Ribonucleoside-diphosphate reductase [Nitrosococcus oceani ATCC 19707] gi|207087993|gb|EDZ65266.1| ribonucleoside-diphosphate reductase, beta subunit [Nitrosococcus oceani AFC27] Length = 412 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 85/125 (68%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDES+H+NFGIDVINQIK+ENPHLW+ F+Q++ M+ EA LE YAH+TMP+G +GL Sbjct: 288 MRDESMHMNFGIDVINQIKLENPHLWSDSFKQETLRMIQEAVSLETQYAHDTMPRGVLGL 347 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP E+Y++FIANRRC QIGL + NPFPWMSEV+DLKKEKNFFETRVTEYQ G Sbjct: 348 NAPMFEEYLKFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 407 Query: 121 ELKWD 125 L WD Sbjct: 408 ALSWD 412 >gi|77460516|ref|YP_350023.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas fluorescens Pf0-1] gi|77384519|gb|ABA76032.1| ribonucleoside-diphosphate reductase beta chain [Pseudomonas fluorescens Pf0-1] Length = 416 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEASQMILQGTQLEIEYARDTMPRGVLGM 351 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 352 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411 Query: 121 ELKWD 125 L WD Sbjct: 412 ALSWD 416 >gi|325272776|ref|ZP_08139120.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas sp. TJI-51] gi|324102083|gb|EGB99585.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas sp. TJI-51] Length = 416 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411 Query: 121 ELKWD 125 L WD Sbjct: 412 ALSWD 416 >gi|297563527|ref|YP_003682501.1| ribonucleoside-diphosphate reductase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847975|gb|ADH69995.1| Ribonucleoside-diphosphate reductase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 360 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 88/125 (70%), Positives = 102/125 (81%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW++EFQ + R ML EA LE+AY ETMP+G +GL Sbjct: 236 LRDESIHLNFGIDVINQIKIENPHLWSEEFQAEVRQMLTEACELEVAYGRETMPRGVLGL 295 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CE+YM FI +RR QIGL P+F TENPFPWMSE++DL+KEKNFFETRV EYQ G Sbjct: 296 NAELCEKYMHFITDRRAEQIGLAPIFGETENPFPWMSEMMDLQKEKNFFETRVIEYQTGG 355 Query: 121 ELKWD 125 L WD Sbjct: 356 GLDWD 360 >gi|170720377|ref|YP_001748065.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas putida W619] gi|169758380|gb|ACA71696.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida W619] Length = 416 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411 Query: 121 ELKWD 125 L WD Sbjct: 412 ALSWD 416 >gi|226953559|ref|ZP_03824023.1| ribonucleotide reductase, beta subunit [Acinetobacter sp. ATCC 27244] gi|294649451|ref|ZP_06726876.1| ribonucleotide-diphosphate reductase beta subunit [Acinetobacter haemolyticus ATCC 19194] gi|226835696|gb|EEH68079.1| ribonucleotide reductase, beta subunit [Acinetobacter sp. ATCC 27244] gi|292824656|gb|EFF83434.1| ribonucleotide-diphosphate reductase beta subunit [Acinetobacter haemolyticus ATCC 19194] Length = 427 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 78/124 (62%), Positives = 96/124 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLWT FQQ+ M+ E T+LEI YA +TMP+G +G+ Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTATFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 364 NASMMEEYLKFICNRRLAQLGLPEQFAGVTNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423 Query: 121 ELKW 124 L W Sbjct: 424 ALSW 427 >gi|104780527|ref|YP_607025.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas entomophila L48] gi|95109514|emb|CAK14215.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas entomophila L48] Length = 415 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 351 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L WD Sbjct: 411 ALSWD 415 >gi|152980709|ref|YP_001354668.1| ribonucleotide-diphosphate reductase subunit beta [Janthinobacterium sp. Marseille] gi|151280786|gb|ABR89196.1| ribonucleoside-diphosphate reductase beta chain [Janthinobacterium sp. Marseille] Length = 392 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 100/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+IN IK+ENPHLWT +F+++ +T+ A LE YA +TMP+G +GL Sbjct: 268 LRDESMHCNFGIDLINTIKLENPHLWTPQFREEIKTLFLRAVELEYRYAEDTMPRGVLGL 327 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y++FIANRR QIGLEP+F+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 328 NAPMFKGYLRFIANRRAQQIGLEPMFEQEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 387 Query: 121 ELKWD 125 L W+ Sbjct: 388 ALNWE 392 >gi|148359319|ref|YP_001250526.1| ribonucleoside-diphosphate reductase subunit beta [Legionella pneumophila str. Corby] gi|296107366|ref|YP_003619066.1| ribonucleoside-diphosphate reductase beta chain [Legionella pneumophila 2300/99 Alcoy] gi|148281092|gb|ABQ55180.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella pneumophila str. Corby] gi|295649267|gb|ADG25114.1| ribonucleoside-diphosphate reductase beta chain [Legionella pneumophila 2300/99 Alcoy] gi|307610475|emb|CBX00047.1| hypothetical protein LPW_18021 [Legionella pneumophila 130b] Length = 367 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 95/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIKIENPHLWT EF+ + ++ E LE YA +TMP G +G+ Sbjct: 241 LRDESMHMNFGIDVINQIKIENPHLWTPEFKNEMIQLIREGVELEYQYARDTMPHGILGM 300 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+ FIANRR +QIGL + ENPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 301 NAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFFETRVIEYQAGG 360 Query: 121 ELKWD 125 L WD Sbjct: 361 TLSWD 365 >gi|262280153|ref|ZP_06057938.1| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter calcoaceticus RUH2202] gi|262260504|gb|EEY79237.1| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter calcoaceticus RUH2202] Length = 427 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 78/124 (62%), Positives = 97/124 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLW+ EFQQ+ M+ E T+LEI YA +TMP+G +G+ Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWSAEFQQEVVQMIVEGTMLEIEYARDTMPRGVLGM 363 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423 Query: 121 ELKW 124 L W Sbjct: 424 ALSW 427 >gi|262369327|ref|ZP_06062655.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter johnsonii SH046] gi|262315395|gb|EEY96434.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter johnsonii SH046] Length = 427 Score = 197 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 77/124 (62%), Positives = 96/124 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENP LWT EFQ++ M+ E T+LEI YA +TMP+G +G+ Sbjct: 304 LRDESMHLNFGIDMINQIKIENPSLWTAEFQEEIIQMILEGTMLEIEYARDTMPRGVLGM 363 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 364 NAAMMEEYLKFICNRRLAQLGLPEQFAGVNNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423 Query: 121 ELKW 124 L W Sbjct: 424 ALSW 427 >gi|52842002|ref|YP_095801.1| ribonucleotide-diphosphate reductase subunit beta [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629113|gb|AAU27854.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 381 Score = 197 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 95/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIKIENPHLWT EF+ + ++ E LE YA +TMP G +G+ Sbjct: 255 LRDESMHMNFGIDVINQIKIENPHLWTPEFKNEMIQLIREGVELEYQYARDTMPHGILGM 314 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+ FIANRR +QIGL + ENPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 315 NAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFFETRVIEYQAGG 374 Query: 121 ELKWD 125 L WD Sbjct: 375 TLSWD 379 >gi|26987912|ref|NP_743337.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas putida KT2440] gi|167035231|ref|YP_001670462.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas putida GB-1] gi|24982621|gb|AAN66801.1|AE016309_3 ribonucleoside reductase, beta subunit [Pseudomonas putida KT2440] gi|166861719|gb|ABZ00127.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida GB-1] gi|313497534|gb|ADR58900.1| NrdB [Pseudomonas putida BIRD-1] Length = 416 Score = 197 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411 Query: 121 ELKWD 125 L WD Sbjct: 412 ALSWD 416 >gi|255019430|ref|ZP_05291537.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Acidithiobacillus caldus ATCC 51756] gi|254971128|gb|EET28583.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Acidithiobacillus caldus ATCC 51756] Length = 345 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 75/125 (60%), Positives = 100/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENP LWT+ FQQ+ ++ + LE AYA +TMP+G +GL Sbjct: 220 LRDESMHCNFGIDLINQIKLENPQLWTEGFQQEIVGLIRQGVELECAYADDTMPRGILGL 279 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP ++Y+++I NRR QIGL+P ++ +NPFPWMSE++DLKKEKNFFE+RVT+YQ G Sbjct: 280 NAPMFKEYVRYIGNRRLSQIGLKPQWENVQNPFPWMSEMMDLKKEKNFFESRVTDYQTGG 339 Query: 121 ELKWD 125 L WD Sbjct: 340 ALSWD 344 >gi|330504346|ref|YP_004381215.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas mendocina NK-01] gi|328918632|gb|AEB59463.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas mendocina NK-01] Length = 416 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW + + ++ M+ + T LEI YA +TMP+G +G+ Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAQMKDEATQMILQGTQLEIEYARDTMPRGVLGM 351 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411 Query: 121 ELKWD 125 L WD Sbjct: 412 ALSWD 416 >gi|146308172|ref|YP_001188637.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas mendocina ymp] gi|145576373|gb|ABP85905.1| Ribonucleoside-diphosphate reductase [Pseudomonas mendocina ymp] Length = 416 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW + + ++ M+ + T LEI YA +TMP+G +G+ Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAQMKDEATQMILQGTQLEIEYARDTMPRGVLGM 351 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411 Query: 121 ELKWD 125 L WD Sbjct: 412 ALSWD 416 >gi|146282010|ref|YP_001172163.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas stutzeri A1501] gi|145570215|gb|ABP79321.1| ribonucleoside reductase, small chain [Pseudomonas stutzeri A1501] Length = 415 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLW E + ++ M+ + T LEI YA +TMP+G +G+ Sbjct: 291 LRDESMHLNFGIDMINQIKIENPHLWDAEMKDEATQMILQGTQLEIEYARDTMPRGVLGM 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 351 NASMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L WD Sbjct: 411 ALSWD 415 >gi|299771426|ref|YP_003733452.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter sp. DR1] gi|298701514|gb|ADI92079.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter sp. DR1] Length = 427 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 78/124 (62%), Positives = 97/124 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLW+ EFQQ+ M+ E T+LEI YA +TMP+G +G+ Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWSAEFQQEVVQMIVEGTMLEIEYARDTMPRGVLGM 363 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423 Query: 121 ELKW 124 L W Sbjct: 424 ALSW 427 >gi|30250346|ref|NP_842416.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosomonas europaea ATCC 19718] gi|30181141|emb|CAD86334.1| Ribonucleotide reductase [Nitrosomonas europaea ATCC 19718] Length = 382 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 82/125 (65%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGIDVINQIK+ENPHLWT+EF+++ ++ +A LE YA +TMP+G +GL Sbjct: 258 LRDESMHCNFGIDVINQIKLENPHLWTREFREEISALMRKAVELEYRYAEDTMPRGVLGL 317 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP ++Y++FI NRR HQIGL+PLF NPFPWMSE+IDLKKEKNFFETRV EYQ G Sbjct: 318 NAPMFKEYLRFIINRRSHQIGLDPLFPEAGNPFPWMSEMIDLKKEKNFFETRVIEYQTGG 377 Query: 121 ELKWD 125 L WD Sbjct: 378 VLSWD 382 >gi|226227154|ref|YP_002761260.1| ribonucleoside-diphosphate reductase beta subunit [Gemmatimonas aurantiaca T-27] gi|226090345|dbj|BAH38790.1| ribonucleoside-diphosphate reductase beta subunit [Gemmatimonas aurantiaca T-27] Length = 371 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 89/125 (71%), Positives = 102/125 (81%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+ENPHLW+ FQ++ R ML EA LE+AY +TMP+GF+GL Sbjct: 247 LRDESIHLNFGIDVINQIKVENPHLWSAAFQEEVRQMLAEACELEVAYGRDTMPRGFLGL 306 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CE YM FI NRRC Q+GL P+F T+NPFPWMSE IDLKKEKNFFETRV EYQ G Sbjct: 307 NAALCETYMHFITNRRCAQLGLAPVFPETDNPFPWMSEAIDLKKEKNFFETRVIEYQNGG 366 Query: 121 ELKWD 125 LKWD Sbjct: 367 ALKWD 371 >gi|262376783|ref|ZP_06070011.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter lwoffii SH145] gi|262308493|gb|EEY89628.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter lwoffii SH145] Length = 427 Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 78/124 (62%), Positives = 97/124 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENP LWT EFQ++ M+ E T+LEI YA +TMP+G +G+ Sbjct: 304 LRDESMHLNFGIDMINQIKIENPGLWTTEFQEEIIQMILEGTMLEIEYARDTMPRGVLGM 363 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FIANRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 364 NAGMMEEYLKFIANRRLAQLGLPEQFAGVNNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423 Query: 121 ELKW 124 L W Sbjct: 424 ALSW 427 >gi|325121074|gb|ADY80597.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter calcoaceticus PHEA-2] Length = 370 Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 79/124 (63%), Positives = 97/124 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+ Sbjct: 247 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVVQMIVEGTMLEIEYARDTMPRGVLGM 306 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 307 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 366 Query: 121 ELKW 124 L W Sbjct: 367 ALSW 370 >gi|324998522|ref|ZP_08119634.1| ribonucleoside-diphosphate reductase beta chain [Pseudonocardia sp. P1] Length = 358 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 87/125 (69%), Positives = 103/125 (82%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID INQIKIENPHLWT+EF + R MLHEA LE+AYA +TMP+G +GL Sbjct: 234 LRDESIHLNFGIDCINQIKIENPHLWTEEFAAEIRAMLHEACELEVAYARDTMPRGMLGL 293 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A SCEQY++FI +RR QIGL PLF +NPFPWMSE +DL+KEKNFFETRVTEY+ G Sbjct: 294 TAESCEQYLRFITDRRAEQIGLAPLFGQADNPFPWMSEAMDLRKEKNFFETRVTEYRTGG 353 Query: 121 ELKWD 125 L+WD Sbjct: 354 SLEWD 358 >gi|15596352|ref|NP_249846.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas aeruginosa PAO1] gi|107100605|ref|ZP_01364523.1| hypothetical protein PaerPA_01001630 [Pseudomonas aeruginosa PACS2] gi|116049087|ref|YP_792111.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas aeruginosa UCBPP-PA14] gi|152988648|ref|YP_001349579.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas aeruginosa PA7] gi|218892881|ref|YP_002441750.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas aeruginosa LESB58] gi|254239525|ref|ZP_04932847.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa 2192] gi|296390475|ref|ZP_06879950.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas aeruginosa PAb1] gi|313106126|ref|ZP_07792381.1| NrdB, tyrosyl radical-harboring component of class Ia ribonucleotide reductase [Pseudomonas aeruginosa 39016] gi|9947077|gb|AAG04544.1|AE004545_7 NrdB, tyrosyl radical-harboring component of class Ia ribonucleotide reductase [Pseudomonas aeruginosa PAO1] gi|115584308|gb|ABJ10323.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa UCBPP-PA14] gi|126192903|gb|EAZ56966.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa 2192] gi|150963806|gb|ABR85831.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa PA7] gi|187939552|gb|ACD38699.1| ribonucleoside reductase small chain [Pseudomonas aeruginosa] gi|218773109|emb|CAW28921.1| NrdB, tyrosyl radical-harboring component of class Ia ribonucleotide reductase [Pseudomonas aeruginosa LESB58] gi|310878883|gb|EFQ37477.1| NrdB, tyrosyl radical-harboring component of class Ia ribonucleotide reductase [Pseudomonas aeruginosa 39016] Length = 415 Score = 196 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW + + ++ M+ + T LEI YA +TMP+G +G+ Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAQMKDEATQMILQGTQLEIEYARDTMPRGVLGM 350 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 351 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410 Query: 121 ELKWD 125 L WD Sbjct: 411 ALSWD 415 >gi|302525965|ref|ZP_07278307.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces sp. AA4] gi|302434860|gb|EFL06676.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces sp. AA4] Length = 357 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 86/125 (68%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID INQIKIENPHLWT+EFQ + R ML EA LE+ YA +TMP+G +GL Sbjct: 233 LRDESIHLNFGIDCINQIKIENPHLWTEEFQAEVRGMLQEACELEVKYARDTMPRGMLGL 292 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A CEQYM FI +RR QIGL P++ ENPFPWMSE +DLKKEKNFFETRV EYQ G Sbjct: 293 SADLCEQYMHFITDRRAQQIGLPPIYGENENPFPWMSEAMDLKKEKNFFETRVIEYQSGG 352 Query: 121 ELKWD 125 L WD Sbjct: 353 ALDWD 357 >gi|160871658|ref|ZP_02061790.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsiella grylli] gi|159120457|gb|EDP45795.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsiella grylli] Length = 362 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 77/125 (61%), Positives = 92/125 (73%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+ENPHLWT EF++ ++ E LE YA +T+P+G +GL Sbjct: 237 LRDESMHLNFGIDVINQIKLENPHLWTPEFKRYVINLIKEGVDLEYQYALDTLPRGILGL 296 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA Y++FI NRR QIGL + NP PWMSE+IDLKKEKNFFETRVTEYQ G Sbjct: 297 NANLMWDYLRFIGNRRFTQIGLAEQYPGVSNPLPWMSEIIDLKKEKNFFETRVTEYQTGG 356 Query: 121 ELKWD 125 L WD Sbjct: 357 SLNWD 361 >gi|315122301|ref|YP_004062790.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495703|gb|ADR52302.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 372 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 94/125 (75%), Positives = 109/125 (87%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDES+HLNFGID+INQIKIENPHLWT++FQQ+ R ML EA LLE+AY +TMPK F+G+ Sbjct: 248 MRDESVHLNFGIDMINQIKIENPHLWTEDFQQEVRKMLQEAALLEVAYGKDTMPKPFLGI 307 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CE+YM FI NRRC QIGL+P+F+ TENPFPWMSEVIDL+KEKNFFETRVTEYQ+G Sbjct: 308 NANLCEKYMYFITNRRCTQIGLDPVFEKTENPFPWMSEVIDLQKEKNFFETRVTEYQKGT 367 Query: 121 ELKWD 125 L WD Sbjct: 368 SLDWD 372 >gi|302877617|ref|YP_003846181.1| Ribonucleoside-diphosphate reductase [Gallionella capsiferriformans ES-2] gi|302580406|gb|ADL54417.1| Ribonucleoside-diphosphate reductase [Gallionella capsiferriformans ES-2] Length = 365 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 78/125 (62%), Positives = 102/125 (81%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFG+D+INQIK+ENPHLWT F+++ R ++ + LE AYA +TMP+G +GL Sbjct: 241 LRDESMHLNFGVDLINQIKMENPHLWTAAFREEIRGLMQKGVELEYAYAEDTMPRGILGL 300 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA ++Y++FIANRRC QIG++ L++ NPFPWMSE+IDLKKEKNFFE+RVTEYQ G Sbjct: 301 NATMFKEYLRFIANRRCQQIGVDILYQGATNPFPWMSEMIDLKKEKNFFESRVTEYQTGG 360 Query: 121 ELKWD 125 L WD Sbjct: 361 TLSWD 365 >gi|256377255|ref|YP_003100915.1| ribonucleoside-diphosphate reductase [Actinosynnema mirum DSM 43827] gi|255921558|gb|ACU37069.1| Ribonucleoside-diphosphate reductase [Actinosynnema mirum DSM 43827] Length = 358 Score = 196 bits (500), Expect = 8e-49, Method: Composition-based stats. Identities = 91/125 (72%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID INQIKIENPHLW + FQ + RTML EA LEIAY +TMP G +GL Sbjct: 234 LRDESIHLNFGIDAINQIKIENPHLWGEAFQAEVRTMLAEACELEIAYGRDTMPNGLLGL 293 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CEQYM+FI NRRC Q+GLEP+F TENPFPWMSE +DLKKEKNFFETRVTEY G Sbjct: 294 NAELCEQYMRFITNRRCAQLGLEPVFAATENPFPWMSEAVDLKKEKNFFETRVTEYASGG 353 Query: 121 ELKWD 125 L WD Sbjct: 354 TLDWD 358 >gi|212212091|ref|YP_002303027.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella burnetii CbuG_Q212] gi|212010501|gb|ACJ17882.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii CbuG_Q212] Length = 401 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 81/125 (64%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIKIENPHLW K FQ++ M+ E LE YA +TMP+G +GL Sbjct: 276 LRDESMHVNFGIDVINQIKIENPHLWNKNFQKEVIEMILEGVELEYQYAKDTMPRGILGL 335 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+Q+IANRRC QIGL F +N FPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 336 NANMFKDYLQYIANRRCAQIGLPEQFPGAKNTFPWMSEMMDLKKEKNFFETRVIEYQAGG 395 Query: 121 ELKWD 125 LKWD Sbjct: 396 TLKWD 400 >gi|110833571|ref|YP_692430.1| ribonucleotide-diphosphate reductase subunit beta [Alcanivorax borkumensis SK2] gi|110646682|emb|CAL16158.1| ribonucleoside reductase, beta subunit [Alcanivorax borkumensis SK2] Length = 430 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIK+ENPHLW + + K+ M+ E T LEI YA +TMP+G +G+ Sbjct: 306 LRDESMHVNFGIDVINQIKLENPHLWDAQMRDKATQMILEGTELEIQYARDTMPRGVLGM 365 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+QFIANRR Q+GL FK NPFPWMSE++DL+KEKNFFETRVTEYQ G Sbjct: 366 NAAMMEEYLQFIANRRLAQLGLPEQFKGVNNPFPWMSEIMDLRKEKNFFETRVTEYQVGG 425 Query: 121 ELKWD 125 L W+ Sbjct: 426 ALSWE 430 >gi|270156779|ref|ZP_06185436.1| ribonucleotide-diphosphate reductase beta subunit [Legionella longbeachae D-4968] gi|289164772|ref|YP_003454910.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella longbeachae NSW150] gi|269988804|gb|EEZ95058.1| ribonucleotide-diphosphate reductase beta subunit [Legionella longbeachae D-4968] gi|288857945|emb|CBJ11805.1| putative ribonucleoside-diphosphate reductase, beta subunit [Legionella longbeachae NSW150] Length = 366 Score = 196 bits (499), Expect = 9e-49, Method: Composition-based stats. Identities = 77/125 (61%), Positives = 95/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIKIENPHLWT EF+++ ++ + LE YA +TMP+G +G+ Sbjct: 240 LRDESMHMNFGIDVINQIKIENPHLWTSEFKEEIIQLIRQGVDLEYQYAKDTMPQGILGM 299 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+ FIANRR QIGL + NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 300 NAEMFEEYLHFIANRRLTQIGLAEQYPGAVNPFPWMSEMMDLKKEKNFFETRVIEYQAGG 359 Query: 121 ELKWD 125 L WD Sbjct: 360 TLSWD 364 >gi|92119123|ref|YP_578852.1| ribonucleotide-diphosphate reductase subunit beta [Nitrobacter hamburgensis X14] gi|91802017|gb|ABE64392.1| Ribonucleoside-diphosphate reductase [Nitrobacter hamburgensis X14] Length = 416 Score = 196 bits (499), Expect = 9e-49, Method: Composition-based stats. Identities = 88/125 (70%), Positives = 100/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW+K FQ++ R ML A LE AY +TMP+GF+GL Sbjct: 292 LRDESIHLNFGIDVINQIKIENPHLWSKPFQEEVRAMLKNAAELEAAYGRDTMPRGFLGL 351 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CEQYM IANRRC Q+GL P+F +NPFPWMSE +DLKKEKNFFETRV EYQ G Sbjct: 352 NAALCEQYMHVIANRRCAQLGLAPVFAEADNPFPWMSEAMDLKKEKNFFETRVIEYQNGG 411 Query: 121 ELKWD 125 L WD Sbjct: 412 ALAWD 416 >gi|289677030|ref|ZP_06497920.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. syringae FF5] Length = 243 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 119 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 178 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 179 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 238 Query: 121 ELKWD 125 L WD Sbjct: 239 ALSWD 243 >gi|254780136|ref|YP_003064549.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Liberibacter asiaticus str. psy62] gi|254781006|ref|YP_003065419.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Liberibacter asiaticus str. psy62] gi|254039813|gb|ACT56609.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Liberibacter asiaticus str. psy62] gi|254040683|gb|ACT57479.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Liberibacter asiaticus str. psy62] Length = 125 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 125/125 (100%), Positives = 125/125 (100%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL Sbjct: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA Sbjct: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 Query: 121 ELKWD 125 ELKWD Sbjct: 121 ELKWD 125 >gi|300784783|ref|YP_003765074.1| ribonucleoside-diphosphate reductase beta chain [Amycolatopsis mediterranei U32] gi|299794297|gb|ADJ44672.1| ribonucleoside-diphosphate reductase beta chain [Amycolatopsis mediterranei U32] Length = 357 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 87/125 (69%), Positives = 100/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID INQIKIENPHLWT+EFQ + R ML EA LE+ YA +TMP+G +GL Sbjct: 233 LRDESIHLNFGIDCINQIKIENPHLWTEEFQAEVRGMLKEACELEVKYARDTMPRGMLGL 292 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A CEQYM F+ +RR QIGL P+F TENPFPWMSE +DLKKEKNFFETRV EYQ G Sbjct: 293 SAQLCEQYMHFVTDRRAQQIGLAPIFGETENPFPWMSEAMDLKKEKNFFETRVIEYQSGG 352 Query: 121 ELKWD 125 L WD Sbjct: 353 ALDWD 357 >gi|29654845|ref|NP_820537.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella burnetii RSA 493] gi|154705923|ref|YP_001423853.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella burnetii Dugway 5J108-111] gi|161831080|ref|YP_001597389.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella burnetii RSA 331] gi|29542113|gb|AAO91051.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii RSA 493] gi|154355209|gb|ABS76671.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii Dugway 5J108-111] gi|161762947|gb|ABX78589.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella burnetii RSA 331] Length = 401 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 81/125 (64%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIKIENPHLW K FQ++ M+ E LE YA +TMP+G +GL Sbjct: 276 LRDESMHVNFGIDVINQIKIENPHLWNKNFQKEVIEMILEGVELEYQYAKDTMPRGILGL 335 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+Q+IANRRC QIGL F +N FPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 336 NANMFKDYLQYIANRRCAQIGLPEQFPGAKNTFPWMSEMMDLKKEKNFFETRVIEYQAGG 395 Query: 121 ELKWD 125 LKWD Sbjct: 396 TLKWD 400 >gi|145588393|ref|YP_001154990.1| ribonucleotide-diphosphate reductase subunit beta [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046799|gb|ABP33426.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 394 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 75/125 (60%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENP LWT F+ + +++ +A LE YA +TMP+G +GL Sbjct: 270 LRDESMHCNFGIDLINQIKLENPQLWTSAFKDEIKSIFEKAVELEYRYAEDTMPRGVLGL 329 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + Y+++I NRRC QIGL+ +F ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 330 NAPMFKGYLRYICNRRCLQIGLDAMFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 389 Query: 121 ELKWD 125 L W+ Sbjct: 390 ALSWE 394 >gi|299134880|ref|ZP_07028072.1| Ribonucleoside-diphosphate reductase [Afipia sp. 1NLS2] gi|298590690|gb|EFI50893.1| Ribonucleoside-diphosphate reductase [Afipia sp. 1NLS2] Length = 373 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 89/125 (71%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+EN HLWTK FQ+ R M+ +A LE AY +TMP+GF+GL Sbjct: 249 LRDESIHLNFGIDVINQIKLENQHLWTKAFQEDVRGMIRDAAELEAAYGRDTMPRGFLGL 308 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CEQYM FIANRRC QIGL P+F TENPFPWMSE +DLKKEKNFFETRV EYQ G Sbjct: 309 NAALCEQYMHFIANRRCAQIGLTPVFPETENPFPWMSEAMDLKKEKNFFETRVIEYQNGG 368 Query: 121 ELKWD 125 L W+ Sbjct: 369 ALSWE 373 >gi|126640804|ref|YP_001083788.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter baumannii ATCC 17978] gi|322506921|gb|ADX02375.1| nrdB [Acinetobacter baumannii 1656-2] gi|323516789|gb|ADX91170.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter baumannii TCDC-AB0715] Length = 361 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 79/124 (63%), Positives = 97/124 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+ Sbjct: 238 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 297 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G Sbjct: 298 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 357 Query: 121 ELKW 124 L W Sbjct: 358 ALSW 361 >gi|114321252|ref|YP_742935.1| ribonucleotide-diphosphate reductase subunit beta [Alkalilimnicola ehrlichii MLHE-1] gi|114227646|gb|ABI57445.1| Ribonucleoside-diphosphate reductase [Alkalilimnicola ehrlichii MLHE-1] Length = 354 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 83/125 (66%), Positives = 102/125 (81%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQI+ ENP LWT +F+Q+ TML EA LE+AYA +TMP+G +GL Sbjct: 230 LRDESIHLNFGIDVINQIRHENPELWTNDFEQEVLTMLREAVELEVAYARDTMPRGMLGL 289 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CE+YM FI NRRC Q+GL+ L+ NPFPWMSEV+DL+KEKNFFETRVT+Y+ G Sbjct: 290 NADMCEEYMHFITNRRCAQLGLKELYPGATNPFPWMSEVMDLQKEKNFFETRVTDYRTGG 349 Query: 121 ELKWD 125 L+WD Sbjct: 350 ALQWD 354 >gi|153208286|ref|ZP_01946665.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella burnetii 'MSU Goat Q177'] gi|165919229|ref|ZP_02219315.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella burnetii RSA 334] gi|212219268|ref|YP_002306055.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella burnetii CbuK_Q154] gi|120576070|gb|EAX32694.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella burnetii 'MSU Goat Q177'] gi|165917090|gb|EDR35694.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella burnetii RSA 334] gi|212013530|gb|ACJ20910.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii CbuK_Q154] Length = 401 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 81/125 (64%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIKIENPHLW K FQ++ M+ E LE YA +TMP+G +GL Sbjct: 276 LRDESMHVNFGIDVINQIKIENPHLWNKNFQKEVIEMILEGVELEYQYAKDTMPRGILGL 335 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+Q+IANRRC QIGL F +N FPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 336 NANMFKDYLQYIANRRCAQIGLPEQFPGAKNTFPWMSEMMDLKKEKNFFETRVIEYQAGG 395 Query: 121 ELKWD 125 LKWD Sbjct: 396 TLKWD 400 >gi|114332419|ref|YP_748641.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosomonas eutropha C91] gi|114309433|gb|ABI60676.1| Ribonucleoside-diphosphate reductase [Nitrosomonas eutropha C91] Length = 377 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 81/125 (64%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGIDVINQIK+ENPHLWT+EF+++ ++ +A LE YA +TMP+G +GL Sbjct: 253 LRDESMHCNFGIDVINQIKLENPHLWTREFREEISALMRKAVELEYRYAEDTMPRGVLGL 312 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP ++Y++FI NRR HQIGL+PLF NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 313 NAPMFKEYLRFIINRRSHQIGLDPLFPEAGNPFPWMSEMVDLKKEKNFFETRVIEYQTGG 372 Query: 121 ELKWD 125 L WD Sbjct: 373 VLSWD 377 >gi|198284354|ref|YP_002220675.1| ribonucleotide-diphosphate reductase subunit beta [Acidithiobacillus ferrooxidans ATCC 53993] gi|198248875|gb|ACH84468.1| Ribonucleoside-diphosphate reductase [Acidithiobacillus ferrooxidans ATCC 53993] Length = 374 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 73/125 (58%), Positives = 94/125 (75%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+ NQIK+ENP LWT+ FQQ+ ++ LE AYA +TMP+G +GL Sbjct: 250 LRDESMHCNFGIDMANQIKVENPQLWTEAFQQEIIDLIRRGVELECAYADDTMPRGVLGL 309 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP +Y+++I NRR Q+GL + +NPFPWMSE++DLKKEKNFFETRVTEYQ G Sbjct: 310 NAPVFREYVKYIGNRRLVQLGLPQQYPGVQNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 369 Query: 121 ELKWD 125 L W+ Sbjct: 370 ALSWE 374 >gi|121608466|ref|YP_996273.1| ribonucleotide-diphosphate reductase subunit beta [Verminephrobacter eiseniae EF01-2] gi|121553106|gb|ABM57255.1| Ribonucleoside-diphosphate reductase [Verminephrobacter eiseniae EF01-2] Length = 399 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 75/125 (60%), Positives = 92/125 (73%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENP LWT F+ + + +A LE YA +TMP G +G+ Sbjct: 275 LRDESMHCNFGIDLINQIKLENPLLWTTAFKAEIEALFLQAVELEYRYAEDTMPHGVLGM 334 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y+++IANRR QIGLE LF NPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 335 NASMFKGYLRYIANRRATQIGLETLFPQETNPFPWMSEMIDLKKERNFFETRVIEYQSGG 394 Query: 121 ELKWD 125 L WD Sbjct: 395 ALCWD 399 >gi|119713586|gb|ABL97637.1| ribonucleotide-diphosphate reductase beta subunit [uncultured marine bacterium EB0_39H12] Length = 412 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 79/125 (63%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIK+ENPHLW ++ + ++ M+ E T LEI YA +TMP+G +G+ Sbjct: 288 LRDESMHLNFGIDMINQIKLENPHLWDEQMRHEAAQMILEGTELEIQYARDTMPRGILGM 347 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+QFIANRR QIGLE F+ NPFPWMSE++DL+KEKNFFETRV EYQ G Sbjct: 348 NAGMMEEYLQFIANRRLVQIGLEEEFEGASNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 407 Query: 121 ELKWD 125 L WD Sbjct: 408 ALTWD 412 >gi|218665361|ref|YP_002427016.1| ribonucleoside-diphosphate reductase, beta subunit [Acidithiobacillus ferrooxidans ATCC 23270] gi|218517574|gb|ACK78160.1| ribonucleoside-diphosphate reductase, beta subunit [Acidithiobacillus ferrooxidans ATCC 23270] Length = 380 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 73/125 (58%), Positives = 94/125 (75%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+ NQIK+ENP LWT+ FQQ+ ++ LE AYA +TMP+G +GL Sbjct: 256 LRDESMHCNFGIDMANQIKVENPQLWTEAFQQEIIDLIRRGVELECAYADDTMPRGVLGL 315 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP +Y+++I NRR Q+GL + +NPFPWMSE++DLKKEKNFFETRVTEYQ G Sbjct: 316 NAPVFREYVKYIGNRRLVQLGLPQQYPGVQNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 375 Query: 121 ELKWD 125 L W+ Sbjct: 376 ALSWE 380 >gi|294339031|emb|CAZ87378.1| putative Ribonucleoside-diphosphate reductase (ribonucleoside diphosphate reductase, beta subunit) [Thiomonas sp. 3As] Length = 410 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 77/125 (61%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID++NQIK+ENPHLWT EF+++ + H+A LE YA +TMP+G +GL Sbjct: 286 LRDESMHTNFGIDLVNQIKLENPHLWTPEFKRELTGLFHQAVELEYRYAEDTMPRGVLGL 345 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FIANRR QIGL+ +F ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 346 NASMFKGYLRFIANRRAVQIGLDAIFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 405 Query: 121 ELKWD 125 L W+ Sbjct: 406 ALSWE 410 >gi|75677068|ref|YP_319489.1| ribonucleotide-diphosphate reductase subunit beta [Nitrobacter winogradskyi Nb-255] gi|74421938|gb|ABA06137.1| ribonucleotide reductase [Nitrobacter winogradskyi Nb-255] Length = 391 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 86/125 (68%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENPHLW+K FQ++ R ML A LE AY +TMP+GF+GL Sbjct: 267 LRDESIHLNFGIDIINQIKIENPHLWSKPFQEEVRAMLKNAADLEAAYGRDTMPRGFLGL 326 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CE YM IANRRC Q+GL P+F +NPFPWMSE +DLKKEKNFFETRV EYQ G Sbjct: 327 NATLCETYMHVIANRRCAQLGLAPVFPDADNPFPWMSEAMDLKKEKNFFETRVIEYQNGG 386 Query: 121 ELKWD 125 L WD Sbjct: 387 ALAWD 391 >gi|296135014|ref|YP_003642256.1| Ribonucleoside-diphosphate reductase [Thiomonas intermedia K12] gi|295795136|gb|ADG29926.1| Ribonucleoside-diphosphate reductase [Thiomonas intermedia K12] Length = 402 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 77/125 (61%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID++NQIK+ENPHLWT EF+++ + H+A LE YA +TMP+G +GL Sbjct: 278 LRDESMHTNFGIDLVNQIKLENPHLWTPEFKRELTGLFHQAVELEYRYAEDTMPRGVLGL 337 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA + Y++FIANRR QIGL+ +F ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 338 NASMFKGYLRFIANRRAVQIGLDAIFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 397 Query: 121 ELKWD 125 L W+ Sbjct: 398 ALSWE 402 >gi|284032753|ref|YP_003382684.1| Ribonucleoside-diphosphate reductase [Kribbella flavida DSM 17836] gi|283812046|gb|ADB33885.1| Ribonucleoside-diphosphate reductase [Kribbella flavida DSM 17836] Length = 354 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 85/125 (68%), Positives = 94/125 (75%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLHLNFGID INQIK+ENPHLWT FQ + R ML EA LE+AY T+P G +GL Sbjct: 230 LRDESLHLNFGIDCINQIKLENPHLWTPAFQAEVRRMLTEACELEVAYGRATLPNGMLGL 289 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A CEQYM FI +RR Q+GL PLF T NPF WMSEV+DLKKEKNFFETRV EYQ G Sbjct: 290 TAELCEQYMHFITDRRAEQLGLAPLFGETRNPFGWMSEVMDLKKEKNFFETRVIEYQSGG 349 Query: 121 ELKWD 125 L WD Sbjct: 350 GLSWD 354 >gi|254429337|ref|ZP_05043044.1| ribonucleoside-diphosphate reductase, beta subunit [Alcanivorax sp. DG881] gi|196195506|gb|EDX90465.1| ribonucleoside-diphosphate reductase, beta subunit [Alcanivorax sp. DG881] Length = 355 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 78/125 (62%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIK+ENPHLW + + K+ M+ E LEI YA +TMP+G +G+ Sbjct: 231 LRDESMHVNFGIDVINQIKLENPHLWDAQMRDKATQMILEGAELEIQYARDTMPRGVLGM 290 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+QFIANRR Q+GL FK NPFPWMSE++DL+KEKNFFETRVTEYQ G Sbjct: 291 NAAMMEEYLQFIANRRLAQLGLPEQFKGVNNPFPWMSEIMDLRKEKNFFETRVTEYQVGG 350 Query: 121 ELKWD 125 L W+ Sbjct: 351 ALSWE 355 >gi|257055668|ref|YP_003133500.1| ribonucleotide reductase, beta subunit [Saccharomonospora viridis DSM 43017] gi|256585540|gb|ACU96673.1| ribonucleotide reductase, beta subunit [Saccharomonospora viridis DSM 43017] Length = 349 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 87/125 (69%), Positives = 103/125 (82%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFG+D INQIK ENPHLWT EFQQ+ R ML EA LE+AYAH+TMP+ +GL Sbjct: 225 LRDESIHLNFGVDCINQIKAENPHLWTPEFQQQVRDMLVEACELEVAYAHDTMPRPMLGL 284 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A CEQYM FI +RR Q+GL+P+F ENPFPWMSEVIDL+KEKNFFETRVT+Y+ GA Sbjct: 285 SAELCEQYMHFITDRRAAQLGLDPVFGERENPFPWMSEVIDLRKEKNFFETRVTDYRSGA 344 Query: 121 ELKWD 125 L WD Sbjct: 345 ALAWD 349 >gi|312962626|ref|ZP_07777115.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas fluorescens WH6] gi|311283001|gb|EFQ61593.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas fluorescens WH6] Length = 136 Score = 192 bits (490), Expect = 9e-48, Method: Composition-based stats. Identities = 80/125 (64%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 12 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 71 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 72 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 131 Query: 121 ELKWD 125 L WD Sbjct: 132 ALSWD 136 >gi|119478322|ref|ZP_01618353.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma proteobacterium HTCC2143] gi|119448662|gb|EAW29907.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma proteobacterium HTCC2143] Length = 422 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 76/125 (60%), Positives = 101/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+ENP LW+++FQQ+ M+ E T LEI YA ++MP+G +G+ Sbjct: 298 LRDESMHLNFGIDVINQIKLENPQLWSEKFQQEIIQMILEGTQLEIEYARDSMPRGVLGM 357 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y+QFI+NRR +Q+GL ++ +NPFPWMSE++DL+KEKNFFETRV EYQ G Sbjct: 358 NAAMMEEYLQFISNRRLNQLGLPEQYQGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 417 Query: 121 ELKWD 125 L W+ Sbjct: 418 ALNWE 422 >gi|85714830|ref|ZP_01045816.1| ribonucleotide reductase [Nitrobacter sp. Nb-311A] gi|85698316|gb|EAQ36187.1| ribonucleotide reductase [Nitrobacter sp. Nb-311A] Length = 389 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 89/125 (71%), Positives = 99/125 (79%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLWTK FQ + R ML A LE AY +TMP+GF+GL Sbjct: 265 LRDESIHLNFGIDVINQIKIENPHLWTKTFQDEVRAMLKNAAELEAAYGRDTMPRGFLGL 324 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CE YM IANRRC Q+GL P+F T+NPFPWMSE +DLKKEKNFFETRV EYQ G Sbjct: 325 NAALCETYMHVIANRRCAQLGLAPVFAETDNPFPWMSEAMDLKKEKNFFETRVIEYQNGG 384 Query: 121 ELKWD 125 L WD Sbjct: 385 ALAWD 389 >gi|90425007|ref|YP_533377.1| ribonucleotide-diphosphate reductase subunit beta [Rhodopseudomonas palustris BisB18] gi|90107021|gb|ABD89058.1| Ribonucleoside-diphosphate reductase [Rhodopseudomonas palustris BisB18] Length = 386 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 89/125 (71%), Positives = 100/125 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENP LWT FQ++ R ML EA LE AY+ +TMP+GF+GL Sbjct: 262 LRDESIHLNFGIDVINQIKIENPKLWTAGFQEELRGMLQEAAELEAAYSRDTMPRGFLGL 321 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CEQYM FI NRRC Q+GL P+F ENPFPWMSE +DLKKEKNFFETRV EYQ G Sbjct: 322 NAALCEQYMHFITNRRCAQLGLAPIFAEVENPFPWMSETMDLKKEKNFFETRVIEYQNGG 381 Query: 121 ELKWD 125 L WD Sbjct: 382 ALTWD 386 >gi|115525181|ref|YP_782092.1| ribonucleotide reductase [Rhodopseudomonas palustris BisA53] gi|115519128|gb|ABJ07112.1| ribonucleotide reductase [Rhodopseudomonas palustris BisA53] Length = 223 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 88/125 (70%), Positives = 98/125 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+INQIKIENP LWT FQ++ R ML EA LE AY +TMP+GF GL Sbjct: 99 LRDESIHLNFGIDIINQIKIENPELWTAGFQEELRGMLREAAELEAAYCRDTMPRGFFGL 158 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CEQYM FI NRRC Q+GL P+F ENPFPWMSE +DLKKEKNFFETRV EYQ G Sbjct: 159 NAALCEQYMHFITNRRCAQLGLAPIFAEVENPFPWMSETMDLKKEKNFFETRVIEYQNGG 218 Query: 121 ELKWD 125 L WD Sbjct: 219 ALTWD 223 >gi|300022335|ref|YP_003754946.1| ribonucleoside-diphosphate reductase [Hyphomicrobium denitrificans ATCC 51888] gi|299524156|gb|ADJ22625.1| Ribonucleoside-diphosphate reductase [Hyphomicrobium denitrificans ATCC 51888] Length = 374 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 85/125 (68%), Positives = 97/125 (77%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK EN HLW+K FQ + R ML +A LE AY +TMP G +GL Sbjct: 250 LRDESIHLNFGIDVINQIKAENAHLWSKAFQDEVRGMLRDAAQLEAAYGRDTMPTGLLGL 309 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 N EQYM+FIANRRC Q+GL P+FK ENPFPWMSE +DLKKEKNFFETRV EYQ G Sbjct: 310 NPGLTEQYMEFIANRRCAQLGLTPVFKDRENPFPWMSEAMDLKKEKNFFETRVIEYQNGG 369 Query: 121 ELKWD 125 L W+ Sbjct: 370 ALSWE 374 >gi|192291019|ref|YP_001991624.1| ribonucleotide-diphosphate reductase subunit beta [Rhodopseudomonas palustris TIE-1] gi|192284768|gb|ACF01149.1| Ribonucleoside-diphosphate reductase [Rhodopseudomonas palustris TIE-1] Length = 373 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 84/125 (67%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK+EN +WT FQ R M+H+A LE AY +TMP G +GL Sbjct: 249 LRDESIHLNFGIDVINQIKLENAAVWTASFQDDIRGMIHDAAELEAAYGRDTMPHGLLGL 308 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA CE YM FIANRRC Q+GL P+F T+NPFPWMSE +DLKKEKNFFETRV EYQ G Sbjct: 309 NAALCESYMHFIANRRCVQLGLRPVFAETDNPFPWMSETMDLKKEKNFFETRVIEYQNGG 368 Query: 121 ELKWD 125 L WD Sbjct: 369 ALDWD 373 >gi|171463021|ref|YP_001797134.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192559|gb|ACB43520.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 394 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 73/125 (58%), Positives = 95/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H NFGID+INQIK+ENP LW F+ + +++ +A LE YA +TMP+G +GL Sbjct: 270 LRDESMHCNFGIDLINQIKLENPQLWISAFKDEIKSIFEKAVELEYRYAEDTMPRGVLGL 329 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NAP + +++I NRRC QIGL+ +F ENPFPWMSE+IDLKKE+NFFETRV EYQ G Sbjct: 330 NAPMFKGCLRYICNRRCLQIGLDAMFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 389 Query: 121 ELKWD 125 L W+ Sbjct: 390 ALSWE 394 >gi|166154172|ref|YP_001654290.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis 434/Bu] gi|166155047|ref|YP_001653302.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335416|ref|ZP_07223660.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis L2tet1] gi|165930160|emb|CAP03644.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia trachomatis 434/Bu] gi|165931035|emb|CAP06598.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 346 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 72/124 (58%), Positives = 92/124 (74%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP +WT E QQ+ ++ A LEI YA + +P+G +GL Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGL 283 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A Y+Q IA+RR +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRVTEYQ A Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVTEYQHAA 342 Query: 121 ELKW 124 L W Sbjct: 343 SLTW 346 >gi|282890382|ref|ZP_06298910.1| hypothetical protein pah_c016o114 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499764|gb|EFB42055.1| hypothetical protein pah_c016o114 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 350 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 74/124 (59%), Positives = 92/124 (74%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGID+IN IK ENP +WT EF+ + M+ EA LEI YA + +P G +GL Sbjct: 228 LRDESIHLNFGIDLINTIKEENPEVWTPEFKDQIIDMVKEAVELEIQYAADCLPNGILGL 287 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA Y+ +IA+RR +IGL+P + T NPFPWMSEV+DL KEKNFFETRVT+YQ GA Sbjct: 288 NAALFRDYVGYIADRRLERIGLKPQYN-TANPFPWMSEVMDLDKEKNFFETRVTQYQSGA 346 Query: 121 ELKW 124 L W Sbjct: 347 ALVW 350 >gi|325110864|ref|YP_004271932.1| ribonucleotide reductase [Planctomyces brasiliensis DSM 5305] gi|324971132|gb|ADY61910.1| ribonucleotide reductase [Planctomyces brasiliensis DSM 5305] Length = 353 Score = 184 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 72/125 (57%), Positives = 91/125 (72%), Gaps = 1/125 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE+ HLNFGID+IN IK ENP +WT++FQQ+ ++ EA LEI YA + +P+G +GL Sbjct: 230 LRDETTHLNFGIDLINGIKHENPDIWTEKFQQEIIDLVKEAVELEIDYARDCLPRGVLGL 289 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 N Y+Q IA+RR +IGL L+ + NPFPWMSE +DL KEKNFFETRVTEYQ G Sbjct: 290 NGNLFRDYVQHIADRRLERIGLPTLYN-SSNPFPWMSETMDLAKEKNFFETRVTEYQTGG 348 Query: 121 ELKWD 125 L WD Sbjct: 349 TLSWD 353 >gi|268316001|ref|YP_003289720.1| Ribonucleoside-diphosphate reductase [Rhodothermus marinus DSM 4252] gi|262333535|gb|ACY47332.1| Ribonucleoside-diphosphate reductase [Rhodothermus marinus DSM 4252] Length = 347 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 75/125 (60%), Positives = 99/125 (79%), Gaps = 1/125 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP LWT EFQ++ + ++ EA LE+AYA++ +P+G +GL Sbjct: 223 LRDETIHLNFGIDLINGIKAENPELWTPEFQREVQQLIEEAVELEVAYAYDCLPRGVLGL 282 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 AP +Y+Q+IA+RR +IGL+ + ++NPFPWMSE IDL KEKNFFETRVTEYQQ A Sbjct: 283 TAPMFREYVQYIADRRLERIGLKARY-GSKNPFPWMSETIDLLKEKNFFETRVTEYQQAA 341 Query: 121 ELKWD 125 L WD Sbjct: 342 ALSWD 346 >gi|112489977|pdb|2ANI|A Chain A, Crystal Structure Of The F127y Mutant Of Ribonucleotide Reductase R2 From Chlamydia Trachomatis Length = 346 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 71/124 (57%), Positives = 91/124 (73%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP +WT E QQ+ ++ A LEI YA + +P+G +GL Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGL 283 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A Y+Q IA+RR +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRV EYQ A Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVIEYQHAA 342 Query: 121 ELKW 124 L W Sbjct: 343 SLTW 346 >gi|15605563|ref|NP_220349.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis D/UW-3/CX] gi|255311668|ref|ZP_05354238.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis 6276] gi|255317969|ref|ZP_05359215.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis 6276s] gi|14195107|sp|O84835|RIR2_CHLTR RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit gi|51247460|pdb|1SYY|A Chain A, Crystal Structure Of The R2 Subunit Of Ribonucleotide Reductase From Chlamydia Trachomatis gi|3329298|gb|AAC68425.1| Ribonucleoside Reductase, Small Chain [Chlamydia trachomatis D/UW-3/CX] gi|296436383|gb|ADH18557.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis G/9768] gi|296437314|gb|ADH19484.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis G/11222] gi|296438242|gb|ADH20403.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis G/11074] gi|297140743|gb|ADH97501.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis G/9301] gi|297748957|gb|ADI51503.1| Ribonucleoside-diphosphate reductase beta chain [Chlamydia trachomatis D-EC] gi|297749837|gb|ADI52515.1| Ribonucleoside-diphosphate reductase beta chain [Chlamydia trachomatis D-LC] Length = 346 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 71/124 (57%), Positives = 91/124 (73%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP +WT E QQ+ ++ A LEI YA + +P+G +GL Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGL 283 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A Y+Q IA+RR +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRV EYQ A Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVIEYQHAA 342 Query: 121 ELKW 124 L W Sbjct: 343 SLTW 346 >gi|33242353|ref|NP_877294.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila pneumoniae TW-183] gi|33236864|gb|AAP98951.1| ribonucleoside reductase small chain [Chlamydophila pneumoniae TW-183] Length = 365 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 66/124 (53%), Positives = 91/124 (73%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP +WT E Q++ ++ +A LEI YA + +P+G +GL Sbjct: 243 LRDETIHLNFGIDLINGIKEENPEVWTTELQEEIVALIEKAVELEIEYAKDCLPRGILGL 302 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + Y++ IA+RR +IGL+P++ ++ NPFPWMSE +DL KEKNFFETRVTEYQ Sbjct: 303 RSSMFIDYVRHIADRRLERIGLKPIY-HSRNPFPWMSETMDLNKEKNFFETRVTEYQTAG 361 Query: 121 ELKW 124 L W Sbjct: 362 NLSW 365 >gi|88812072|ref|ZP_01127324.1| ribonucleotide-diphosphate reductase beta subunit [Nitrococcus mobilis Nb-231] gi|88790576|gb|EAR21691.1| ribonucleotide-diphosphate reductase beta subunit [Nitrococcus mobilis Nb-231] Length = 370 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 78/125 (62%), Positives = 96/125 (76%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIK ENPHLWT EFQ ++ + E+ LE+ YA +T+P+G +GL Sbjct: 246 LRDESIHLNFGIDVINQIKQENPHLWTAEFQATAQRTILESMALEVDYARDTLPRGVLGL 305 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA E+Y++FI NRR QIGL F ENP PWMSE++DLKKEKNFFETRVTEY+ G Sbjct: 306 NAAMIEEYLRFITNRRLAQIGLTEAFPGAENPLPWMSELVDLKKEKNFFETRVTEYRTGG 365 Query: 121 ELKWD 125 L W+ Sbjct: 366 ALSWE 370 >gi|329943118|ref|ZP_08291892.1| ribonucleotide reductase, small chain family protein [Chlamydophila psittaci Cal10] gi|332287701|ref|YP_004422602.1| ribonucleotide reductase subunit beta [Chlamydophila psittaci 6BC] gi|325507260|gb|ADZ18898.1| ribonucleotide reductase subunit beta [Chlamydophila psittaci 6BC] gi|328814665|gb|EGF84655.1| ribonucleotide reductase, small chain family protein [Chlamydophila psittaci Cal10] gi|328914953|gb|AEB55786.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila psittaci 6BC] Length = 346 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 68/124 (54%), Positives = 91/124 (73%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP +WT E Q + ++ +A LEI YA + +P+G +GL Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEVWTPELQSEIIALIEKAVDLEIEYARDCLPRGILGL 283 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A Y++ IA+RR +IGL+P++ +++NPFPWMSE IDL KEKNFFETRV EYQ A Sbjct: 284 KASMFIDYVRHIADRRLERIGLKPIY-HSKNPFPWMSETIDLNKEKNFFETRVIEYQTAA 342 Query: 121 ELKW 124 L W Sbjct: 343 NLSW 346 >gi|62185356|ref|YP_220141.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila abortus S26/3] gi|62148423|emb|CAH64191.1| putative ibonucleoside reductase small subunit [Chlamydophila abortus S26/3] Length = 349 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 68/124 (54%), Positives = 91/124 (73%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP +WT E Q + ++ +A LEI YA + +P+G +GL Sbjct: 227 LRDETIHLNFGIDLINGIKEENPEVWTPELQSEIIALIEKAVDLEIEYARDCLPRGILGL 286 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A Y++ IA+RR +IGL+P++ +++NPFPWMSE IDL KEKNFFETRV EYQ A Sbjct: 287 KASMFIDYVRHIADRRLERIGLKPIY-HSKNPFPWMSETIDLNKEKNFFETRVIEYQTAA 345 Query: 121 ELKW 124 L W Sbjct: 346 NLSW 349 >gi|15834835|ref|NP_296594.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia muridarum Nigg] gi|270285001|ref|ZP_06194395.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia muridarum Nigg] gi|270289024|ref|ZP_06195326.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia muridarum Weiss] gi|301336399|ref|ZP_07224601.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia muridarum MopnTet14] gi|14195147|sp|Q9PL92|RIR2_CHLMU RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit gi|7190253|gb|AAF39087.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydia muridarum Nigg] Length = 346 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 72/124 (58%), Positives = 92/124 (74%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFG+D+IN IK ENP +WT E QQ+ M+ A LEI YA + +P+G +GL Sbjct: 224 LRDETIHLNFGVDLINGIKEENPEIWTTELQQEIIEMIQRAVDLEIDYARDCLPRGILGL 283 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A Y+Q IA+RR +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRVTEYQ A Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVTEYQHAA 342 Query: 121 ELKW 124 L W Sbjct: 343 SLTW 346 >gi|29840533|ref|NP_829639.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila caviae GPIC] gi|29834882|gb|AAP05517.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila caviae GPIC] Length = 346 Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 67/124 (54%), Positives = 92/124 (74%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP +W++E Q + ++ +A LEI YA + +P+G +GL Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEVWSQELQDEIIALIQKAVDLEIEYAKDCLPRGILGL 283 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + Y++ IA+RR +IGL+P++ Y++NPFPWMSE IDL KEKNFFETRVTEYQ Sbjct: 284 KSSMFIDYVRHIADRRLERIGLKPIY-YSKNPFPWMSETIDLNKEKNFFETRVTEYQTSG 342 Query: 121 ELKW 124 L W Sbjct: 343 NLSW 346 >gi|15618893|ref|NP_225179.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila pneumoniae CWL029] gi|15836516|ref|NP_301040.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila pneumoniae J138] gi|16752043|ref|NP_445409.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila pneumoniae AR39] gi|14195165|sp|Q9Z6S4|RIR2_CHLPN RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit gi|4377313|gb|AAD19122.1| Ribonucleoside Reductase, Small Chain [Chlamydophila pneumoniae CWL029] gi|7189783|gb|AAF38660.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila pneumoniae AR39] gi|8979358|dbj|BAA99192.1| ribonucleoside reductase, small chain [Chlamydophila pneumoniae J138] gi|269302786|gb|ACZ32886.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila pneumoniae LPCoLN] Length = 346 Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 66/124 (53%), Positives = 91/124 (73%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP +WT E Q++ ++ +A LEI YA + +P+G +GL Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEVWTTELQEEIVALIEKAVELEIEYAKDCLPRGILGL 283 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + Y++ IA+RR +IGL+P++ ++ NPFPWMSE +DL KEKNFFETRVTEYQ Sbjct: 284 RSSMFIDYVRHIADRRLERIGLKPIY-HSRNPFPWMSETMDLNKEKNFFETRVTEYQTAG 342 Query: 121 ELKW 124 L W Sbjct: 343 NLSW 346 >gi|313848275|emb|CBY17276.1| putative ibonucleoside reductase small subunit [Chlamydophila psittaci RD1] Length = 349 Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 68/124 (54%), Positives = 91/124 (73%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP +WT E Q + ++ +A LEI YA + +P+G +GL Sbjct: 227 LRDETIHLNFGIDLINGIKEENPEVWTPELQSEIIALIEKAVDLEIEYARDCLPRGILGL 286 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A Y++ IA+RR +IGL+P++ +++NPFPWMSE IDL KEKNFFETRV EYQ A Sbjct: 287 KASMFIDYVRHIADRRLERIGLKPIY-HSKNPFPWMSETIDLNKEKNFFETRVIEYQTAA 345 Query: 121 ELKW 124 L W Sbjct: 346 NLSW 349 >gi|76789573|ref|YP_328659.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis A/HAR-13] gi|237803260|ref|YP_002888454.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis B/Jali20/OT] gi|237805181|ref|YP_002889335.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis B/TZ1A828/OT] gi|255349232|ref|ZP_05381239.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis 70] gi|255503769|ref|ZP_05382159.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis 70s] gi|255507450|ref|ZP_05383089.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis D(s)2923] gi|76168103|gb|AAX51111.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia trachomatis A/HAR-13] gi|231273481|emb|CAX10397.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia trachomatis B/TZ1A828/OT] gi|231274494|emb|CAX11290.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia trachomatis B/Jali20/OT] gi|289525874|emb|CBJ15356.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia trachomatis Sweden2] gi|296435459|gb|ADH17637.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis E/150] gi|296439176|gb|ADH21329.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia trachomatis E/11023] Length = 346 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 71/124 (57%), Positives = 91/124 (73%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP +WT E QQ+ ++ A LEI YA + +P+G +GL Sbjct: 224 LRDETIHLNFGIDLINGIKEENPGIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGL 283 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A Y+Q IA+RR +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRV EYQ A Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVIEYQHAA 342 Query: 121 ELKW 124 L W Sbjct: 343 SLTW 346 >gi|330443801|ref|YP_004376787.1| ribonucleoside-diphosphate reductase subunit beta [Chlamydophila pecorum E58] gi|328806911|gb|AEB41084.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila pecorum E58] Length = 346 Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 68/124 (54%), Positives = 92/124 (74%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP +W+KE Q++ ++ A LEI YA + +PKG +GL Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEVWSKELQEEIIALIETAVGLEIDYAKDCLPKGILGL 283 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + Y++ IA+RR +IGL+P++ ++NPFPWMSE +DL KEKNFFETRVTEYQ A Sbjct: 284 KSSMFIDYVRHIADRRLERIGLKPIYN-SKNPFPWMSETMDLNKEKNFFETRVTEYQTAA 342 Query: 121 ELKW 124 L W Sbjct: 343 SLSW 346 >gi|89898045|ref|YP_515155.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila felis Fe/C-56] gi|89331417|dbj|BAE81010.1| ribonucleoside-diphosphate reductase beta chain [Chlamydophila felis Fe/C-56] Length = 349 Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 66/124 (53%), Positives = 92/124 (74%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP +W+++ Q + ++ +A LEI YA + +P+G +GL Sbjct: 227 LRDETIHLNFGIDLINGIKEENPEVWSQQLQDEIVDLIQKAVDLEIEYARDCLPRGILGL 286 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + Y++ IA+RR +IGL+P++ ++NPFPWMSE IDL KEKNFFETRVTEYQ A Sbjct: 287 RSSMFIDYVRHIADRRLERIGLKPIYN-SKNPFPWMSETIDLNKEKNFFETRVTEYQTAA 345 Query: 121 ELKW 124 L W Sbjct: 346 NLNW 349 >gi|298243909|ref|ZP_06967716.1| Ribonucleoside-diphosphate reductase [Ktedonobacter racemifer DSM 44963] gi|297556963|gb|EFH90827.1| Ribonucleoside-diphosphate reductase [Ktedonobacter racemifer DSM 44963] Length = 361 Score = 179 bits (456), Expect = 8e-44, Method: Composition-based stats. Identities = 72/125 (57%), Positives = 94/125 (75%), Gaps = 1/125 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP LWT EFQ ++ A LEIAYA++ +P G +GL Sbjct: 238 LRDETIHLNFGIDLINGIKAENPELWTTEFQAHIYDLIKRAVELEIAYAYDCLPNGILGL 297 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA S Y+Q +A+RR +IGL P+F ++ +PFPWMSE +DL KEKNFFETRVTEYQ + Sbjct: 298 NAESFRSYVQHVADRRLERIGLAPIF-HSSHPFPWMSETMDLSKEKNFFETRVTEYQAAS 356 Query: 121 ELKWD 125 L+W+ Sbjct: 357 TLEWE 361 >gi|189219089|ref|YP_001939730.1| ribonucleotide-diphosphate reductase subunit beta [Methylacidiphilum infernorum V4] gi|189185947|gb|ACD83132.1| Ribonucleotide reductase, beta subunit [Methylacidiphilum infernorum V4] Length = 361 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 68/124 (54%), Positives = 94/124 (75%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN I+ ENP +WT FQ++ M+ E+ LE AYA + +P+G +GL Sbjct: 239 LRDETIHLNFGIDLINGIREENPEIWTAGFQKEIEEMIDESVRLEYAYARDCLPRGILGL 298 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 N+ + Y+++IA+RR +IG + + ++NPFPWMSEV+DL KEKNFFETRVTEYQ GA Sbjct: 299 NSALFKDYVEYIADRRLERIGFKAKY-GSKNPFPWMSEVMDLVKEKNFFETRVTEYQSGA 357 Query: 121 ELKW 124 L W Sbjct: 358 VLNW 361 >gi|283779060|ref|YP_003369815.1| ribonucleoside-diphosphate reductase [Pirellula staleyi DSM 6068] gi|283437513|gb|ADB15955.1| Ribonucleoside-diphosphate reductase [Pirellula staleyi DSM 6068] Length = 357 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 69/125 (55%), Positives = 90/125 (72%), Gaps = 1/125 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN ++ ENP +WT +FQ++ ++ EA LE+AYA + +P+G VGL Sbjct: 234 LRDETIHLNFGIDLINGVRAENPGIWTADFQERVIKLVREAVELEVAYAWDCLPRGIVGL 293 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 N Y+Q IA+RR +IGL + NPFPWMSE +DL KEKNFFETRVTEYQ A Sbjct: 294 NGELFRDYVQHIADRRLERIGLPTQYGSA-NPFPWMSETMDLGKEKNFFETRVTEYQSAA 352 Query: 121 ELKWD 125 L WD Sbjct: 353 SLAWD 357 >gi|149173739|ref|ZP_01852368.1| ribonucleotide-diphosphate reductase beta subunit [Planctomyces maris DSM 8797] gi|148847269|gb|EDL61603.1| ribonucleotide-diphosphate reductase beta subunit [Planctomyces maris DSM 8797] Length = 359 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 71/125 (56%), Positives = 85/125 (68%), Gaps = 1/125 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP LWT EFQQ + A LEI YA + +P G +GL Sbjct: 236 LRDETIHLNFGIDLINGIKQENPDLWTPEFQQLIIDRMKYAAELEIEYAKDCLPTGILGL 295 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 N +Y+Q IA+RR +IGL + NPFPWMSE +DL KEKNFFETRVTEYQ Sbjct: 296 NGELFREYVQHIADRRLERIGLPAQYGSA-NPFPWMSETMDLSKEKNFFETRVTEYQSSG 354 Query: 121 ELKWD 125 L WD Sbjct: 355 SLNWD 359 >gi|159899093|ref|YP_001545340.1| ribonucleotide-diphosphate reductase subunit beta [Herpetosiphon aurantiacus ATCC 23779] gi|159892132|gb|ABX05212.1| Ribonucleoside-diphosphate reductase [Herpetosiphon aurantiacus ATCC 23779] Length = 342 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 69/125 (55%), Positives = 92/125 (73%), Gaps = 1/125 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFG+D+IN IK ENP +WT EFQ + ++ ++ LE YA E +P+G +GL Sbjct: 219 LRDETIHLNFGVDLINGIKAENPAIWTNEFQAEIVQLIRQSVELEAQYAAECLPRGVMGL 278 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A Y+Q+IA+RR +IGL + ++NPFPWMSE IDL KEKNFFETRVTEYQ A Sbjct: 279 HAAMFRDYVQYIADRRLQRIGLAIQY-GSQNPFPWMSETIDLTKEKNFFETRVTEYQSAA 337 Query: 121 ELKWD 125 L+WD Sbjct: 338 SLEWD 342 >gi|297621807|ref|YP_003709944.1| ribonucleoside-diphosphate reductase beta subunit [Waddlia chondrophila WSU 86-1044] gi|297377108|gb|ADI38938.1| ribonucleoside-diphosphate reductase beta subunit [Waddlia chondrophila WSU 86-1044] Length = 344 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 69/125 (55%), Positives = 92/125 (73%), Gaps = 1/125 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP +W ++ + ++ +A LEIAYA E +P G +GL Sbjct: 221 LRDETIHLNFGIDLINGIKAENPEIWNEDLTDEINGLVQQAVELEIAYAKECLPHGVLGL 280 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA +Y+Q++A+RR +IGL ++K + NPFPWMSE +DL KEKNFFETRVTEYQ A Sbjct: 281 NAGLFVEYVQYVADRRLERIGLSAIYK-SSNPFPWMSETMDLTKEKNFFETRVTEYQSAA 339 Query: 121 ELKWD 125 L WD Sbjct: 340 VLSWD 344 >gi|269839640|ref|YP_003324332.1| ribonucleoside-diphosphate reductase [Thermobaculum terrenum ATCC BAA-798] gi|269791370|gb|ACZ43510.1| Ribonucleoside-diphosphate reductase [Thermobaculum terrenum ATCC BAA-798] Length = 353 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 69/125 (55%), Positives = 89/125 (71%), Gaps = 1/125 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP WT+E ++ M+ +A EIAYA E +P G +GL Sbjct: 230 LRDETVHLNFGIDLINTIKEENPEAWTEELRRDLVGMIRQAVEYEIAYARECLPNGVLGL 289 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA +Y+Q+IA+RR +I L ++ + NPFPWMSE +DL KEKNFFETRVTEYQ Sbjct: 290 NADLFREYVQYIADRRLERIELPVQYR-SRNPFPWMSETMDLPKEKNFFETRVTEYQNAG 348 Query: 121 ELKWD 125 L WD Sbjct: 349 TLVWD 353 >gi|15791173|ref|NP_280997.1| ribonucleotide-diphosphate reductase subunit beta [Halobacterium sp. NRC-1] gi|169236929|ref|YP_001690129.1| ribonucleotide-diphosphate reductase subunit beta [Halobacterium salinarum R1] gi|10581791|gb|AAG20477.1| ribonucleoside reductase small chain [Halobacterium sp. NRC-1] gi|167727995|emb|CAP14783.1| ribonucleoside-diphosphate reductase beta subunit [Halobacterium salinarum R1] Length = 331 Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 58/125 (46%), Positives = 89/125 (71%), Gaps = 1/125 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDESLHLNFG+D+INQI+ E+P +WT +F+ + +++ +A LE YA + P +G+ Sbjct: 208 MRDESLHLNFGVDLINQIRDEHPDVWTADFEAEVNSLMRDAVDLEQLYARDACPDDLLGM 267 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 ++ Y++++A+RR Q+ ++P++ T+NPFPWM+E +DL E NFFE V+EYQQG Sbjct: 268 SSEQFADYVEYVADRRFQQLRMDPVY-GTDNPFPWMTEQVDLNTETNFFERNVSEYQQGG 326 Query: 121 ELKWD 125 L WD Sbjct: 327 SLDWD 331 >gi|257053403|ref|YP_003131236.1| ribonucleotide-diphosphate reductase subunit beta [Halorhabdus utahensis DSM 12940] gi|256692166|gb|ACV12503.1| Ribonucleoside-diphosphate reductase [Halorhabdus utahensis DSM 12940] Length = 330 Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats. Identities = 64/124 (51%), Positives = 86/124 (69%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDESLH+ FG+D+I+QI+ ENP +WT EF + ++ EA LE YA E P+ +G+ Sbjct: 208 MRDESLHVGFGVDLIDQIRTENPGVWTDEFDSEVIDLIKEAVELEQIYAREACPEEILGM 267 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + Y+++IA+RR Q+ L + TENPFPWMSE +DL KEKNFFET+VTEYQ G Sbjct: 268 SGSQFADYVEYIADRRLDQLDLPEQY-GTENPFPWMSEQVDLNKEKNFFETQVTEYQSGG 326 Query: 121 ELKW 124 L+W Sbjct: 327 SLEW 330 >gi|325181522|emb|CCA15972.1| ribonucleosidediphosphate reductase small chain put [Albugo laibachii Nc14] Length = 1611 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 67/121 (55%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +++ + P ++ +A ++E + +++P +G+N Sbjct: 264 RDEGLHCDFACLMYSKLVNKLPE-------ASIHAIISDAVVIEQEFVRDSLPVELIGMN 316 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R H +G+ L+ +T NPF WM +I L+ + NFFE RV EY + Sbjct: 317 SSLMGQYIEFVADRLLHALGVSKLY-HTSNPFDWMD-MISLQGKTNFFEKRVGEYAKSGT 374 Query: 122 L 122 + Sbjct: 375 I 375 >gi|316971821|gb|EFV55552.1| ribonucleotide reductase R2 subunit [Trichinella spiralis] Length = 366 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 37/123 (30%), Positives = 67/123 (54%), Gaps = 9/123 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +K K + + R ++ EA +E + + +P +G+N Sbjct: 241 RDEGLHCDFACLLYSHLKK-------KPTEDRVRQIITEAVSIEQEFLTDALPVRLIGMN 293 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++++A+R ++G ++ +ENPF +M E+I L+ + NFFE RV EYQ+ Sbjct: 294 CVLMSQYIEYVADRLLVELGCSKVYN-SENPFDFM-EMISLEGKTNFFEKRVGEYQKAGV 351 Query: 122 LKW 124 + Sbjct: 352 MAD 354 >gi|159465291|ref|XP_001690856.1| ribonucleoside-diphosphate reductase small subunit [Chlamydomonas reinhardtii] gi|158279542|gb|EDP05302.1| ribonucleoside-diphosphate reductase small subunit [Chlamydomonas reinhardtii] Length = 493 Score = 169 bits (430), Expect = 9e-41, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +++ ++ EA LE + E + +G+N Sbjct: 360 RDEGLHCDFACCLYS-------HLKNRLSRERVLQIVDEAVQLEDEFCTEALSCELLGMN 412 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G E + T NPF WM E+I L+ + NFFE RV EYQ+ Sbjct: 413 ADLMRQYIRFVADRLLVSLGYEKHYN-TRNPFDWM-EMISLQGKANFFERRVGEYQRAGV 470 Query: 122 L 122 + Sbjct: 471 M 471 >gi|284043177|ref|YP_003393517.1| ribonucleoside-diphosphate reductase [Conexibacter woesei DSM 14684] gi|283947398|gb|ADB50142.1| Ribonucleoside-diphosphate reductase [Conexibacter woesei DSM 14684] Length = 364 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 54/122 (44%), Positives = 81/122 (66%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES H+ ++ ++ ENP +WT EF+ + R ++ EA LE + + +P VGL Sbjct: 235 LRDESNHIELFRRLLRELVAENPEIWTAEFRDELRELMREAVALEQRFIDDCLPVEGVGL 294 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA QY+ +IA+RR +GLEPL ENP PW++E++D++KE+NFFE RVTEYQ+ + Sbjct: 295 NADEFAQYIDYIADRRLEGVGLEPLKPGVENPLPWLAELMDVRKEQNFFEGRVTEYQKAS 354 Query: 121 EL 122 L Sbjct: 355 AL 356 >gi|313117005|ref|YP_004038129.1| ribonucleotide reductase, beta subunit [Halogeometricum borinquense DSM 11551] gi|312294957|gb|ADQ68993.1| ribonucleotide reductase, beta subunit [Halogeometricum borinquense DSM 11551] Length = 330 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 63/124 (50%), Positives = 85/124 (68%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDESLH+ FG+D+INQI+ ENP WT EF + R ++ +A LE YA E P +G+ Sbjct: 208 MRDESLHVGFGVDLINQIRAENPDAWTDEFGAEVRDLIEKAVDLEQIYAREACPDDVLGM 267 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + +Y++ +A+RR Q+ L+ + T+NPFPWMSE +DL KEKNFFET+VTEYQ G Sbjct: 268 SPDQFAEYVEHVADRRLGQLDLDASY-GTDNPFPWMSEAVDLNKEKNFFETQVTEYQSGG 326 Query: 121 ELKW 124 L W Sbjct: 327 SLDW 330 >gi|1710401|sp|P49730|RIR2_TOBAC RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleoside-diphosphate reductase R2 subunit; AltName: Full=Ribonucleotide reductase small subunit gi|1044912|emb|CAA63194.1| ribonucleotide reductase R2 [Nicotiana tabacum] Length = 329 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 69/122 (56%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ TK +++ + ++ +A +E + + +P VG+N Sbjct: 200 RDEGLHCDFACLLYSLLR-------TKLTEERVKGIVADAVEIEREFVCDALPCALVGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +Y++F+A+R +G + L+ +NPF WM E+I L+ + NFFE RV EYQ+ + Sbjct: 253 GDLMSKYIEFVADRLLDALGYDKLYN-AQNPFDWM-ELISLQGKTNFFEKRVGEYQKASV 310 Query: 122 LK 123 + Sbjct: 311 MS 312 >gi|291220709|ref|XP_002730368.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like [Saccoglossus kowalevskii] Length = 402 Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL K QQ+ ++ +A +E + + +P +G+N Sbjct: 277 RDEGLHCDFACLMFS-------HLTNKPSQQRIIEIIRDAVKIEQEFLTDALPVSLIGMN 329 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R +G ++ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 330 KDLMKQYIEFVADRLLLDLGCNKIYN-KENPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 387 Query: 122 LK 123 + Sbjct: 388 MS 389 >gi|322368525|ref|ZP_08043093.1| ribonucleotide-diphosphate reductase subunit beta [Haladaptatus paucihalophilus DX253] gi|320551809|gb|EFW93455.1| ribonucleotide-diphosphate reductase subunit beta [Haladaptatus paucihalophilus DX253] Length = 330 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 62/124 (50%), Positives = 85/124 (68%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH+ FG+D+IN+I+ ENP+ WT F + ++ A LE YA+E P +G+ Sbjct: 208 LRDESLHVGFGVDLINEIRAENPNAWTDAFGDEVTDLITNAVELEKIYAYEACPDEILGM 267 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A +Y++ IA+RR Q+ L+ + TENPFPWMSE +DL KEKNFFET+VTEYQ G Sbjct: 268 SAAQFAEYVEHIADRRLAQLDLDEQY-GTENPFPWMSEQVDLNKEKNFFETQVTEYQSGG 326 Query: 121 ELKW 124 L W Sbjct: 327 SLDW 330 >gi|28393533|gb|AAO42187.1| putative ribonucleoside-diphosphate reductase small chain [Arabidopsis thaliana] Length = 243 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ TK + + + ++ +A +E + + + VG+N Sbjct: 111 RDEGLHCDFACLIYSLLR-------TKFDEDRLKAIVCDAVEIEREFVCDALSCALVGMN 163 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G ++ T NPF WM E+I L+ + NFFE RV EYQ+ + Sbjct: 164 RELMSQYIEFVADRLLAALGCGKVYGVT-NPFDWM-ELISLQGKTNFFEKRVGEYQKASV 221 Query: 122 LK 123 + Sbjct: 222 MS 223 >gi|297668213|ref|XP_002812343.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like [Pongo abelii] Length = 449 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A +E + E +P +G+N Sbjct: 324 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 376 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 377 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 434 Query: 122 LK 123 + Sbjct: 435 MS 436 >gi|260064013|ref|NP_001159403.1| ribonucleoside-diphosphate reductase subunit M2 isoform 1 [Homo sapiens] Length = 449 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A +E + E +P +G+N Sbjct: 324 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 376 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 377 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 434 Query: 122 LK 123 + Sbjct: 435 MS 436 >gi|119621373|gb|EAX00968.1| hCG23833, isoform CRA_b [Homo sapiens] gi|119621374|gb|EAX00969.1| hCG23833, isoform CRA_b [Homo sapiens] Length = 449 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A +E + E +P +G+N Sbjct: 324 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 376 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 377 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 434 Query: 122 LK 123 + Sbjct: 435 MS 436 >gi|291412327|ref|XP_002722439.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Oryctolagus cuniculus] Length = 400 Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N Sbjct: 275 RDEGLHCDFACLMFK-------HLVHKPSEQRVQEIIVNAVRIEQEFLTEALPVKLIGMN 327 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 328 CALMKQYIEFVADRLLLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 385 Query: 122 LK 123 + Sbjct: 386 MS 387 >gi|126303832|ref|XP_001381111.1| PREDICTED: similar to hCG23833, [Monodelphis domestica] Length = 493 Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++K + ++ A +E + E +P +G+N Sbjct: 368 RDEGLHCDFACLMFK-------HLVHKPSEEKVKEIIINAVRIEQEFLTEALPVKLIGMN 420 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 421 CTLMKQYIEFVADRLMLELGFSKIFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 478 Query: 122 LK 123 + Sbjct: 479 MS 480 >gi|300709535|ref|YP_003735349.1| ribonucleotide-diphosphate reductase subunit beta [Halalkalicoccus jeotgali B3] gi|299123218|gb|ADJ13557.1| ribonucleotide-diphosphate reductase subunit beta [Halalkalicoccus jeotgali B3] Length = 330 Score = 166 bits (422), Expect = 9e-40, Method: Composition-based stats. Identities = 62/124 (50%), Positives = 87/124 (70%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDESLHLNFG+D+IN ++ EN +WT F+ + +L EA LE YA E P+ +G+ Sbjct: 208 MRDESLHLNFGVDLINTVREENSGIWTDVFEAEIEGLLREAVELERTYAREACPEEVLGM 267 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +Y++++A+RR Q+G+EP++ T+NPFPWM+E +DL KEKNFFET V EYQ G Sbjct: 268 GPAQFAEYVEYVADRRLDQLGMEPVYD-TDNPFPWMAEQVDLNKEKNFFETNVAEYQSGG 326 Query: 121 ELKW 124 L+W Sbjct: 327 SLEW 330 >gi|289177074|ref|NP_001165948.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 2 [Homo sapiens] Length = 423 Score = 166 bits (422), Expect = 9e-40, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N Sbjct: 298 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 350 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 351 CILMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 408 Query: 122 L 122 + Sbjct: 409 M 409 >gi|297805560|ref|XP_002870664.1| ribonucleoside-diphosphate reductase [Arabidopsis lyrata subsp. lyrata] gi|297316500|gb|EFH46923.1| ribonucleoside-diphosphate reductase [Arabidopsis lyrata subsp. lyrata] Length = 333 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 69/122 (56%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ TK +++ ++++ +A +E + + +P VG+N Sbjct: 201 RDEGLHCDFACLIYSLLR-------TKLDEERLKSIVCDAVEIEREFVCDALPCALVGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G ++ + NPF WM E+I L+ + NFFE RV EYQ+ + Sbjct: 254 RELMSQYIEFVADRLLTALGCGKVYGVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKASV 311 Query: 122 LK 123 + Sbjct: 312 MS 313 >gi|219126374|ref|XP_002183434.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217405190|gb|EEC45134.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 296 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 9/124 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++++ + P + ++ +A +E + + +P +G+N Sbjct: 172 RDEGLHCDFACLLYSKLQNQLP-------VARIVEIITDAVTIEQEFVQDALPVELIGMN 224 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +Y++F A+R +G +K NPF WM E+I L+ + NFFE RV EY + Sbjct: 225 STLMCRYIEFCADRLLVALGCPKHYKAV-NPFDWM-EMISLQGKTNFFEKRVGEYAKSGV 282 Query: 122 LKWD 125 + D Sbjct: 283 GEKD 286 >gi|241166485|ref|XP_002409876.1| ribonucleotide reductase, beta subunit, putative [Ixodes scapularis] gi|215494664|gb|EEC04305.1| ribonucleotide reductase, beta subunit, putative [Ixodes scapularis] Length = 376 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 39/121 (32%), Positives = 69/121 (57%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL K Q + R ++ +A ++E + + +P +G+N Sbjct: 251 RDEGLHTDFACLMFS-------HLVNKPSQARVRQIICDAVVIEQEFLTDALPVALIGMN 303 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 ++Y++F+A+R ++G E ++ +ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 304 CELMKRYIEFVADRLLVELGCEKVYN-SENPFDFM-EHISLEGKTNFFEKRVGEYQKAGV 361 Query: 122 L 122 + Sbjct: 362 M 362 >gi|189501948|ref|YP_001957665.1| hypothetical protein Aasi_0535 [Candidatus Amoebophilus asiaticus 5a2] gi|189497389|gb|ACE05936.1| hypothetical protein Aasi_0535 [Candidatus Amoebophilus asiaticus 5a2] Length = 355 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ +A +E + + +P +G+N Sbjct: 226 RDEGLHCDFACLLYAN------HLQNKLPEERVREIITDAVAIEKEFVTDALPVKLIGMN 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R ++G ++ T NPF +M E+I L+ + NFFE RV EYQ+ Sbjct: 280 ADLMSQYIEFVADRLLLELGCSKVYNAT-NPFDFM-EMISLQGKTNFFEKRVGEYQKAGV 337 Query: 122 LK 123 +K Sbjct: 338 MK 339 >gi|224055741|ref|XP_002298630.1| predicted protein [Populus trichocarpa] gi|222845888|gb|EEE83435.1| predicted protein [Populus trichocarpa] Length = 329 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ EA +E + +++P VG+N Sbjct: 200 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKEAVDIEREFVVDSLPCALVGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EYQ+ + Sbjct: 253 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFFEKRVGEYQKASV 310 Query: 122 LK 123 + Sbjct: 311 MS 312 >gi|929959|gb|AAA74020.1| ribonuleotide reductase small subunit [Urechis caupo] Length = 399 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL K Q++ ++ +A +E ++ E +P +G+N Sbjct: 271 RDEGLHCDFACLMFS-------HLKNKPSQERVYDIIRDAVRIEQSFLTEALPVNLIGMN 323 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R ++G ++ ENPF +M I L+ + NFFE RV EYQ+ Sbjct: 324 CKLMAQYIEFVADRLLLELGCPKIWN-VENPFDFMD-NISLEGKTNFFEKRVGEYQKMGV 381 Query: 122 LK 123 + Sbjct: 382 MS 383 >gi|52077136|dbj|BAD46182.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group] gi|52077275|dbj|BAD46317.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group] gi|186920364|gb|ACC95435.1| ribonucleotide diphosphate reductase small subunit 1 [Oryza sativa Japonica Group] Length = 339 Score = 165 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K + + R ++ +A +E + + +P VG+N Sbjct: 209 RDEGLHCDFACLLYDLLRG-------KLDEARVREIVADAVDIEREFVCDALPVALVGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G + ++ NPF WM E+I L+ + NFFE RV +YQ+ + Sbjct: 262 GDLMSQYIEFVADRLLMALGCKKMYNVA-NPFDWM-ELISLQGKTNFFEKRVGDYQKASV 319 Query: 122 LK 123 + Sbjct: 320 MS 321 >gi|224129040|ref|XP_002328875.1| predicted protein [Populus trichocarpa] gi|222839305|gb|EEE77642.1| predicted protein [Populus trichocarpa] Length = 329 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 200 RDEGLHCDFACLLYSLLRK-------KLSEEQVKGIVKDAVDIEREFVVDALPCALVGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EYQ+ + Sbjct: 253 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFFEKRVGEYQKASV 310 Query: 122 LK 123 + Sbjct: 311 MS 312 >gi|332247268|ref|XP_003272775.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like isoform 1 [Nomascus leucogenys] Length = 434 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A +E + E +P +G+N Sbjct: 309 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 361 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 362 CILMKQYIEFVADRLMLELGFGKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 419 Query: 122 LK 123 + Sbjct: 420 MS 421 >gi|156545974|ref|XP_001606963.1| PREDICTED: similar to ENSANGP00000013211 [Nasonia vitripennis] Length = 388 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 9/123 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K +++ +++ +A +E + + +P +G+N Sbjct: 261 RDEGLHCDFACLMFK-------HIVQKPSEERVISIIKDAVTIEQEFLTDALPVEMIGMN 313 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R ++G ++ +ENPF +M E I L+ + NFFE +V EYQ+ Sbjct: 314 CRLMCQYIEFVADRLLGELGCPKVYN-SENPFDFM-EHISLEGKTNFFEKKVGEYQKWGV 371 Query: 122 LKW 124 ++ Sbjct: 372 MQD 374 >gi|312889900|ref|ZP_07749444.1| Ribonucleoside-diphosphate reductase [Mucilaginibacter paludis DSM 18603] gi|311297432|gb|EFQ74557.1| Ribonucleoside-diphosphate reductase [Mucilaginibacter paludis DSM 18603] Length = 343 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 38/124 (30%), Positives = 67/124 (54%), Gaps = 9/124 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H F + + L K ++ T++ +A +E + + +P +G+N Sbjct: 217 RDEGMHCEFACLLYSM-------LSNKLSKEAVTTIIADAVEIEKEFVTDALPVNLIGMN 269 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R ++G + L+ + NPF +M E+I L+ + NFFE RV +YQ+ Sbjct: 270 AKLMSQYIEFVADRWLQELGYDKLY-HATNPFDFM-EMISLQGKTNFFEKRVGDYQKSGV 327 Query: 122 LKWD 125 L D Sbjct: 328 LNND 331 >gi|298713498|emb|CBJ27053.1| Ribonucleoside-diphosphate reductase small chain [Ectocarpus siliculosus] Length = 504 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 9/118 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + L K ++ ++ EA +E ++ +P +G+N Sbjct: 374 RDEGLHCDFACQLF-------ASLENKPSRETVMAIVREAVEVEKSFICGALPCSLIGMN 426 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 A QY++F+A+R +G + T+NPF WM +I L+ + NFFE RV EYQ+ Sbjct: 427 AGVMSQYIEFVADRLLGSLGYGKSY-GTQNPFDWMD-LISLQGKTNFFEKRVGEYQKA 482 >gi|125554800|gb|EAZ00406.1| hypothetical protein OsI_22421 [Oryza sativa Indica Group] Length = 244 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K + + R ++ +A +E + + +P VG+N Sbjct: 114 RDEGLHCDFACLLYDLLRG-------KLDEARVREIVADAVDIEREFVCDALPVALVGMN 166 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G + ++ NPF WM E+I L+ + NFFE RV +YQ+ + Sbjct: 167 GDLMSQYIEFVADRLLMALGCKKMYNVA-NPFDWM-ELISLQGKTNFFEKRVGDYQKASV 224 Query: 122 LK 123 + Sbjct: 225 MS 226 >gi|224000239|ref|XP_002289792.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220975000|gb|EED93329.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 335 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 73/121 (60%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +++K+ K Q++ +T+++EA +E ++ + +P +G+N Sbjct: 197 RDEGLHCSFACQLYSKLKL-------KLSQEEIQTIINEAVDVEKSFICDALPVSLIGMN 249 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G + ++ ++NPF WM +I L+ + NFFE RV EYQ+ Sbjct: 250 SRLMAQYIEFVADRMLTDLGYQAMY-GSKNPFDWMD-MISLEGKTNFFEKRVGEYQKSGV 307 Query: 122 L 122 + Sbjct: 308 M 308 >gi|330941350|gb|EGH44202.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. pisi str. 1704B] Length = 109 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 66/109 (60%), Positives = 82/109 (75%) Query: 17 QIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRR 76 QIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+NA E Y++FIANRR Sbjct: 1 QIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRR 60 Query: 77 CHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAELKWD 125 QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G L WD Sbjct: 61 LSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGGALSWD 109 >gi|218197485|gb|EEC79912.1| hypothetical protein OsI_21460 [Oryza sativa Indica Group] Length = 345 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K + + + ++ +A +E + + +P VG+N Sbjct: 215 RDEGLHCDFACLLYDLLRG-------KLDESRVQEIVADAVDIEREFVCDALPVALVGMN 267 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G + ++ NPF WM E+I L+ + NFFE RV +YQ+ + Sbjct: 268 GELMSQYIEFVADRLLMALGCKKMYNVA-NPFDWM-ELISLQGKTNFFEKRVGDYQKASV 325 Query: 122 LK 123 + Sbjct: 326 MS 327 >gi|237845387|ref|XP_002371991.1| ribonucleotide-diphosphate reductase, small subunit, putative [Toxoplasma gondii ME49] gi|211969655|gb|EEB04851.1| ribonucleotide-diphosphate reductase, small subunit, putative [Toxoplasma gondii ME49] gi|221501644|gb|EEE27410.1| ribonucleotide-diphosphate reductase, small subunit, putative [Toxoplasma gondii VEG] Length = 391 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 9/123 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +Q+K + P + + M+ EA +E A+ E +P +G+N Sbjct: 266 RDEGLHADFACLLYSQLKHKLPD-------KVVQDMVREAVTVERAFICEALPVDLIGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++F+A+R +G+ +F + NPF WM E+I L+ + NFFE RV EYQ+ Sbjct: 319 NRSMAQYIEFVADRLLTSLGVPKIF-FATNPFDWM-ELISLQGKTNFFEKRVGEYQKAGV 376 Query: 122 LKW 124 + Sbjct: 377 MAD 379 >gi|225451453|ref|XP_002269951.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|147804660|emb|CAN64484.1| hypothetical protein VITISV_012640 [Vitis vinifera] Length = 329 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 68/122 (55%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ ++ +E + + +P VG+N Sbjct: 200 RDEGLHCDFACLLYSLLR-------NKLSEERVKAIVADSVDIEREFVCDALPCALVGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G ++ + NPF WM E+I L+ + NFFE RV EYQ+ + Sbjct: 253 SALMSQYIEFVADRLLGALGYGKMYNVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKASV 310 Query: 122 LK 123 + Sbjct: 311 MS 312 >gi|325119319|emb|CBZ54873.1| hypothetical protein NCLIV_052980 [Neospora caninum Liverpool] Length = 392 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 9/123 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +Q+K + P + + M+ EA +E A+ E +P +G+N Sbjct: 267 RDEGLHADFACLLYSQLKNKLPD-------KVVQDMVREAVTVERAFICEALPVDLIGMN 319 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++F+A+R +G+ +F + NPF WM E+I L+ + NFFE RV EYQ+ Sbjct: 320 NRSMAQYIEFVADRLLTSLGVPKIF-FATNPFDWM-ELISLQGKTNFFEKRVGEYQKAGV 377 Query: 122 LKW 124 + Sbjct: 378 MAD 380 >gi|221480670|gb|EEE19110.1| ribonucleotide-diphosphate reductase, small subunit, putative [Toxoplasma gondii GT1] Length = 391 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 9/123 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +Q+K + P + + M+ EA +E A+ E +P +G+N Sbjct: 266 RDEGLHADFACLLYSQLKHKLPD-------KVVQDMVREAVTVERAFICEALPVDLIGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++F+A+R +G+ +F + NPF WM E+I L+ + NFFE RV EYQ+ Sbjct: 319 NRSMAQYIEFVADRLLTSLGVPKIF-FATNPFDWM-ELISLQGKTNFFEKRVGEYQKAGV 376 Query: 122 LKW 124 + Sbjct: 377 MAD 379 >gi|289582310|ref|YP_003480776.1| ribonucleoside-diphosphate reductase [Natrialba magadii ATCC 43099] gi|289531863|gb|ADD06214.1| Ribonucleoside-diphosphate reductase [Natrialba magadii ATCC 43099] Length = 330 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 62/124 (50%), Positives = 86/124 (69%), Gaps = 1/124 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDESLH+ FG+D+I+QI++ENP +WT F + ++ EA LE YA+E P +G+ Sbjct: 208 MRDESLHVGFGVDLIDQIRMENPDVWTDAFGDEVVELITEAVELEKIYAYEACPDEILGM 267 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A +Y++ IA+RR Q+ L + T+NPFPW+SE +DL KEKNFFET+VTEYQ G Sbjct: 268 SADQFAEYVEHIADRRLGQLDLPTQY-GTDNPFPWLSEQVDLNKEKNFFETQVTEYQSGG 326 Query: 121 ELKW 124 L W Sbjct: 327 SLDW 330 >gi|115466138|ref|NP_001056668.1| Os06g0127900 [Oryza sativa Japonica Group] gi|55296211|dbj|BAD67929.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group] gi|113594708|dbj|BAF18582.1| Os06g0127900 [Oryza sativa Japonica Group] gi|186920368|gb|ACC95437.1| ribonucleotide diphosphate reductase small subunit 2 [Oryza sativa Japonica Group] gi|215706414|dbj|BAG93270.1| unnamed protein product [Oryza sativa Japonica Group] gi|222634884|gb|EEE65016.1| hypothetical protein OsJ_19968 [Oryza sativa Japonica Group] Length = 345 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K + + + ++ +A +E + + +P VG+N Sbjct: 215 RDEGLHCDFACLLYDLLRG-------KLDESRVQEIVADAVDIEREFVCDALPVALVGMN 267 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G + ++ NPF WM E+I L+ + NFFE RV +YQ+ + Sbjct: 268 GELMSQYIEFVADRLLMALGCKKMYNVA-NPFDWM-ELISLQGKTNFFEKRVGDYQKASV 325 Query: 122 LK 123 + Sbjct: 326 MS 327 >gi|212723480|ref|NP_001131892.1| hypothetical protein LOC100193273 [Zea mays] gi|194692834|gb|ACF80501.1| unknown [Zea mays] gi|195624040|gb|ACG33850.1| ribonucleoside-diphosphate reductase small chain [Zea mays] Length = 339 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 69/122 (56%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ +K + + RT++ +A +E + + +P VG+N Sbjct: 209 RDEGLHCDFACLLYDVLR-------SKLDEARVRTIVADAVDIEREFVCDALPVSLVGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G + ++ T NPF WM E+I L+ + NFFE RV +YQ+ + Sbjct: 262 GDLMSQYIEFVADRLLMALGCKKMYNVT-NPFDWM-ELISLQGKTNFFEKRVGDYQKASV 319 Query: 122 LK 123 + Sbjct: 320 MN 321 >gi|75224904|sp|Q6Y657|RIR2B_ARATH RecName: Full=Putative ribonucleoside-diphosphate reductase small chain B; AltName: Full=Ribonucleoside-diphosphate reductase R2B subunit; AltName: Full=Ribonucleotide reductase small subunit B gi|37729626|gb|AAO62422.1| ribonucleotide reductase small subunit [Arabidopsis thaliana] Length = 333 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ TK + + + ++ +A +E + + +P VG+N Sbjct: 201 RDEGLHCDFACLIYSLLR-------TKLDEDRLKAIVCDAVEIEREFVCDALPCALVGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G ++ + NPF WM E+I L+ + NFFE RV EYQ+ + Sbjct: 254 RELMSQYIEFVADRLLAALGCAKVYGVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKASI 311 Query: 122 LK 123 + Sbjct: 312 MS 313 >gi|255536887|ref|XP_002509510.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus communis] gi|223549409|gb|EEF50897.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus communis] Length = 329 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +K K +++ + ++ +A +E + + +P VG+N Sbjct: 200 RDEGLHCDFACLIYSLLKK-------KLSEERVKGIVRDAVNIEREFVCDALPCALVGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G + + NPF WM E+I L+ + NFFE RV EYQ+ A Sbjct: 253 GELMSQYIEFVADRLLGALGCGKEYNVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKAAV 310 Query: 122 LK 123 + Sbjct: 311 MS 312 >gi|308806626|ref|XP_003080624.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus tauri] gi|116059085|emb|CAL54792.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus tauri] Length = 241 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + L K ++ R ++ EA +E + +++P VG+N Sbjct: 113 RDEGLHRDFACLLYQM-------LNNKPDEEVVRKIVTEAVEIEKEFVCDSLPCALVGMN 165 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A Y++++A+ +G+ + T NPF WM E+I L+ + NFFE RV EYQ+ Sbjct: 166 AGMMSDYIEYVADHLFTSLGMPKEYN-TANPFDWM-ELISLQGKTNFFEKRVGEYQKAGV 223 Query: 122 LK 123 + Sbjct: 224 MN 225 >gi|256081213|ref|XP_002576867.1| ribonucleoside-diphosphate reductase small chain [Schistosoma mansoni] gi|238662153|emb|CAZ33104.1| ribonucleoside-diphosphate reductase small chain, putative [Schistosoma mansoni] Length = 365 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + I + P +++ +++ EA L+E + E +P +G+N Sbjct: 237 RDEGLHCDFACLLFKHIIKKPP-------KERVESIIREAVLIEQEFLSEALPVSLIGMN 289 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++FIA+R ++G E ++ +++NPF +M E I ++ + NFFE RV EYQ+ Sbjct: 290 CKLMCQYIEFIADRLLVELGYEKMY-HSDNPFDFM-ENISIEGKTNFFEKRVGEYQRAGV 347 Query: 122 LK 123 + Sbjct: 348 MS 349 >gi|307110551|gb|EFN58787.1| hypothetical protein CHLNCDRAFT_34102 [Chlorella variabilis] Length = 335 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ + +++ ++ +A +E + + +P +G+N Sbjct: 207 RDEGLHTDFACLLYR-------HIHNRLSEERVAEIVTQAVEIEKEFICDALPVDLIGMN 259 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G ++ + NPF WM E+I L+ + NFFE RV +YQ+ Sbjct: 260 SRLMGQYIEFVADRLLVALGNPKVYNVS-NPFDWM-ELISLQGKTNFFEKRVGDYQKAGV 317 Query: 122 LK 123 + Sbjct: 318 MN 319 >gi|15229476|ref|NP_189000.1| RNR2A (RIBONUCLEOTIDE REDUCTASE 2A); ribonucleoside-diphosphate reductase [Arabidopsis thaliana] gi|27735240|sp|P50651|RIR2A_ARATH RecName: Full=Ribonucleoside-diphosphate reductase small chain A; AltName: Full=Ribonucleoside-diphosphate reductase R2A subunit; Short=AtRNR2; Short=Protein R2at; AltName: Full=Ribonucleotide reductase small subunit A gi|13937232|gb|AAK50108.1|AF372971_1 AT3g23580/MDB19_7 [Arabidopsis thaliana] gi|9294514|dbj|BAB02776.1| ribonucleotide reductase [Arabidopsis thaliana] gi|23505945|gb|AAN28832.1| At3g23580/MDB19_7 [Arabidopsis thaliana] gi|332643258|gb|AEE76779.1| Ribonucleoside-diphosphate reductase small chain A [Arabidopsis thaliana] Length = 341 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ + P +K ++HEA +E + + +P +G+N Sbjct: 212 RDEGLHCDFACLLYSLLQKQLP-------LEKVYQIVHEAVEIETEFVCKALPCDLIGMN 264 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY+QF+A+R +G E +K ENPF WM E I L+ + NFFE RV EYQ+ + Sbjct: 265 SNLMSQYIQFVADRLLVTLGCERTYK-AENPFDWM-EFISLQGKTNFFEKRVGEYQKASV 322 Query: 122 LK 123 + Sbjct: 323 MS 324 >gi|242076364|ref|XP_002448118.1| hypothetical protein SORBIDRAFT_06g021460 [Sorghum bicolor] gi|241939301|gb|EES12446.1| hypothetical protein SORBIDRAFT_06g021460 [Sorghum bicolor] Length = 339 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K + + R ++ +A +E + + +P VG+N Sbjct: 209 RDEGLHCDFACLLYDLLRG-------KLDESRVREIVADAVDIEREFVCDALPVALVGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G + ++ NPF WM E+I L+ + NFFE RV EYQ+ + Sbjct: 262 GALMSQYIEFVADRLLMALGHKKMYNVA-NPFDWM-ELISLQGKTNFFEKRVGEYQKASV 319 Query: 122 LK 123 + Sbjct: 320 MS 321 >gi|297831106|ref|XP_002883435.1| RNR2/RNR2A [Arabidopsis lyrata subsp. lyrata] gi|297329275|gb|EFH59694.1| RNR2/RNR2A [Arabidopsis lyrata subsp. lyrata] Length = 341 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ + P +K ++HEA +E + + +P +G+N Sbjct: 212 RDEGLHCDFACLLYSLLQKQLP-------LEKVYQIVHEAVEIETEFVCKALPCDLIGMN 264 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY+QF+A+R +G E +K ENPF WM E I L+ + NFFE RV EYQ+ + Sbjct: 265 SNLMSQYIQFVADRLLVTLGCERRYK-AENPFDWM-EFISLQGKTNFFEKRVGEYQKASV 322 Query: 122 LK 123 + Sbjct: 323 MS 324 >gi|225684487|gb|EEH22771.1| ribonucleoside-diphosphate reductase small chain A [Paracoccidioides brasiliensis Pb03] Length = 413 Score = 164 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + + + ++ EA +E + + +P +G+N Sbjct: 274 RDEGLHTDFACLLFS-------HLRHRPSPEAVQKIITEAVAIEQEFLTDALPCALLGMN 326 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G + ++ + NPF +M I L + NFFE RV +YQ+ Sbjct: 327 AKLMCQYIEFVADRLLVALGNKKVYN-STNPFDFMD-NISLTGKTNFFEKRVGDYQKAGV 384 Query: 122 L 122 + Sbjct: 385 M 385 >gi|330921941|ref|XP_003299625.1| hypothetical protein PTT_10664 [Pyrenophora teres f. teres 0-1] gi|311326599|gb|EFQ92269.1| hypothetical protein PTT_10664 [Pyrenophora teres f. teres 0-1] Length = 410 Score = 164 bits (415), Expect = 6e-39, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + L + ++ R ++ EA +E + + +P +G+N Sbjct: 267 RDEGMHTDFACLLFSL-------LNNRPSKESVRAIITEAVEIEQEFLSDALPCALLGMN 319 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G ++ T NPF +M E I L + NFFE RV +YQ+ Sbjct: 320 ATLMCQYIEFVADRLLLALGNTKVYNAT-NPFDFM-ENISLAGKTNFFEKRVGDYQKAGV 377 Query: 122 L 122 + Sbjct: 378 M 378 >gi|169860861|ref|XP_001837065.1| ribonucleotide reductase small subunit [Coprinopsis cinerea okayama7#130] gi|116501787|gb|EAU84682.1| ribonucleotide reductase small subunit [Coprinopsis cinerea okayama7#130] Length = 414 Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 9/120 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + +K PH + ++ EA +E + + +P +G+N Sbjct: 278 RDEGMHTDFACLLFSHLK-RRPH------PDVVKRIITEAVAIEQEFLTDALPVKLIGMN 330 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G E ++ + NPF +M +I L+ + NFFE RV++Y + Sbjct: 331 AELMCQYIEFVADRLLVSLGNEKVYN-STNPFDFMD-MISLQGKTNFFEKRVSDYAKAGV 388 >gi|156387375|ref|XP_001634179.1| predicted protein [Nematostella vectensis] gi|156221259|gb|EDO42116.1| predicted protein [Nematostella vectensis] Length = 384 Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats. Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 9/123 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K ++ R ++ +A ++E + +P +G+N Sbjct: 259 RDEGLHCDFACLMYK-------YLVNKPDEETVRGIIKDAVVIEQEFLTSALPVKLIGMN 311 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R + + ++ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 312 CALMRQYIEFVADRLLVALNCQKVYN-AENPFDFM-ENISLEGKTNFFEKRVGEYQKSGV 369 Query: 122 LKW 124 + Sbjct: 370 MSD 372 >gi|149408710|ref|XP_001506085.1| PREDICTED: similar to 5,10-methenyltetrahydrofolate synthetase [Ornithorhynchus anatinus] Length = 394 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ + ++ A +E + E +P +G+N Sbjct: 269 RDEGLHCDFACLMFK-------HLVHKPSEERVKEIIINAVRIEQEFLTEALPVKLIGMN 321 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +FK ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 322 CTLMKQYIEFVADRLLLELGFSKIFK-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 379 Query: 122 LK 123 + Sbjct: 380 MS 381 >gi|198420293|ref|XP_002130242.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase subunit M2 (Ribonucleotide reductase small subunit) (Ribonucleotide reductase small chain) [Ciona intestinalis] Length = 393 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K + + ++ +A +E + + +P +G+N Sbjct: 268 RDEGLHCDFACLMFK-------HLLHKPSEARVVEIVKDAVTIEQEFLTDALPVALIGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +FK ENPF +M E+I L+ + NFFE RV EYQ+ Sbjct: 321 NKLMKQYIEFVADRLLVELGCSKVFK-VENPFDFM-ELISLEGKTNFFEKRVGEYQKAGV 378 Query: 122 L 122 + Sbjct: 379 M 379 >gi|840719|emb|CAA54549.1| ribonucleotide reductase R2 [Arabidopsis thaliana] Length = 340 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F +I+ +++ P +K ++HEA +E + + +P +G+N Sbjct: 211 RDEGLHCDFACLLISLLQLHVP-------LEKVYQIVHEAVEIETEFVCKALPCDLIGMN 263 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY+QF+A+R +G E +K ENPF WM E I L+ + NFFE RV EYQ+ + Sbjct: 264 SNLMSQYIQFVADRLLVTLGCERTYK-AENPFDWM-EFISLQGKTNFFEKRVGEYQKASV 321 Query: 122 LK 123 + Sbjct: 322 MS 323 >gi|242095388|ref|XP_002438184.1| hypothetical protein SORBIDRAFT_10g009290 [Sorghum bicolor] gi|241916407|gb|EER89551.1| hypothetical protein SORBIDRAFT_10g009290 [Sorghum bicolor] Length = 339 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++ +K + + R ++ +A +E + + +P VG+N Sbjct: 209 RDEGLHCDFACLLYELLR-------SKLDEARVREIVADAVDIEREFVCDALPVALVGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G + ++ T NPF WM E+I L+ + NFFE RV +YQ+ + Sbjct: 262 GGLMSQYIEFVADRLLMALGCKKMYNAT-NPFDWM-ELISLQGKTNFFEKRVGDYQKASV 319 Query: 122 LK 123 + Sbjct: 320 MN 321 >gi|327261313|ref|XP_003215475.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like isoform 3 [Anolis carolinensis] Length = 391 Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A +E + E +P +G+N Sbjct: 266 RDEGLHCDFACLMFK-------HLVHKPSEERVREIITNAVRIEQEFLTEALPVNLIGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G ++K ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 319 CTLMKQYIEFVADRLILELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 376 Query: 122 LK 123 + Sbjct: 377 MS 378 >gi|322491821|emb|CBZ27094.1| ribonucleoside-diphosphate reductase small chain,putative [Leishmania mexicana MHOM/GT/2001/U1103] Length = 392 Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N Sbjct: 265 RDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G E + T+ PF +M E+I L+ + NFFE +V EYQ+ Sbjct: 319 AELMAQYIEFVADRLLVSLGEEKHYNSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAGV 376 Query: 122 LK 123 + Sbjct: 377 MS 378 >gi|149637725|ref|XP_001508783.1| PREDICTED: similar to Ribonucleotide reductase M2 B (TP53 inducible) [Ornithorhynchus anatinus] Length = 401 Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + K + K + ++ +A +E + E +P G +G+N Sbjct: 276 RDEGLHCDFACLMFQYLVK-------KPSEDKVKEIIIDAVEIEQEFLTEALPVGLIGMN 328 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F +++NPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 329 CTLMKQYIEFVADRLLVELGFSKVF-HSDNPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 386 Query: 122 LK 123 + Sbjct: 387 MS 388 >gi|327261309|ref|XP_003215473.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like isoform 1 [Anolis carolinensis] Length = 394 Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A +E + E +P +G+N Sbjct: 269 RDEGLHCDFACLMFK-------HLVHKPSEERVREIITNAVRIEQEFLTEALPVNLIGMN 321 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G ++K ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 322 CTLMKQYIEFVADRLILELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 379 Query: 122 LK 123 + Sbjct: 380 MS 381 >gi|225432510|ref|XP_002279943.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 340 Score = 163 bits (413), Expect = 9e-39, Method: Composition-based stats. Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ + P QK ++HEA +E + E +P +G+N Sbjct: 212 RDEGLHCDFACLLYSLLQKQLPW-------QKVHHIVHEAVEIETQFVCEALPCALIGMN 264 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G E + ENPF WM E I L+ + NFFE RV +YQ+ + Sbjct: 265 ATLMSQYIKFVADRLLVALGYERKYN-VENPFDWM-EFISLQGKANFFERRVGDYQKASI 322 Query: 122 LK 123 + Sbjct: 323 MS 324 >gi|255551489|ref|XP_002516790.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus communis] gi|223543878|gb|EEF45404.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus communis] Length = 342 Score = 163 bits (413), Expect = 9e-39, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ + QK + ++HEA +E + + +P +G+N Sbjct: 213 RDEGLHCDFACLLYSLLQKQLQW-------QKVQQIVHEAVEIETEFVCDALPCALIGMN 265 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G + + ENPF WM E I L+ + NFFE RV +YQ+ + Sbjct: 266 STLMSQYIKFVADRLLVALGYQRKYN-VENPFDWM-EFISLQGKANFFERRVGDYQKASV 323 Query: 122 LK 123 + Sbjct: 324 MS 325 >gi|18859327|ref|NP_571525.1| ribonucleoside-diphosphate reductase subunit M2 [Danio rerio] gi|292624782|ref|XP_002665783.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like [Danio rerio] gi|3914657|sp|P79733|RIR2_DANRE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2; AltName: Full=Ribonucleotide reductase protein R2 class I; AltName: Full=Ribonucleotide reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|1695831|gb|AAB37103.1| ribonucleotide reductase protein R2 class I [Danio rerio] gi|27881838|gb|AAH44355.1| Ribonucleotide reductase M2 polypeptide [Danio rerio] gi|56207929|emb|CAI21240.1| ribonucleotide reductase M2 polypeptide [Danio rerio] gi|182889152|gb|AAI64707.1| Rrm2 protein [Danio rerio] Length = 386 Score = 163 bits (413), Expect = 9e-39, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++ + ++ A +E + + +P +G+N Sbjct: 261 RDEGLHCDFACLMFK-------HLINKPSEETVKKIIMNAVEIEQEFLTDALPVKLIGMN 313 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G + +++ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 314 CDLMKQYIEFVADRLLLELGFDKVYR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 371 Query: 122 LK 123 + Sbjct: 372 MS 373 >gi|226528734|ref|NP_001150842.1| ribonucleoside-diphosphate reductase small chain [Zea mays] gi|195642302|gb|ACG40619.1| ribonucleoside-diphosphate reductase small chain [Zea mays] Length = 339 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++ K + + R ++ +A +E + + +P VG+N Sbjct: 209 RDEGLHCDFACLLYELLR-------NKLDEARVREIVADAVDIEREFVCDALPVALVGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G + ++ T NPF WM E+I L + NFFE RV +YQ+ + Sbjct: 262 GDLMSQYIEFVADRLLMALGCKKMYNVT-NPFDWM-ELISLMGKTNFFEKRVGDYQKASV 319 Query: 122 LK 123 + Sbjct: 320 MN 321 >gi|212274629|ref|NP_001130908.1| hypothetical protein LOC100192012 [Zea mays] gi|195636980|gb|ACG37958.1| ribonucleoside-diphosphate reductase small chain [Zea mays] Length = 339 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K + + R ++ +A +E + + +P VG+N Sbjct: 209 RDEGLHCDFACLLYDLLRG-------KLDESRVREIVADAVDIEREFVCDALPVALVGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EYQ+ + Sbjct: 262 GGLMSQYIEFVADRLLMALGHRKMYNVA-NPFDWM-ELISLQGKTNFFEKRVGEYQKASV 319 Query: 122 LK 123 + Sbjct: 320 MS 321 >gi|194690416|gb|ACF79292.1| unknown [Zea mays] gi|194704028|gb|ACF86098.1| unknown [Zea mays] gi|195619132|gb|ACG31396.1| ribonucleoside-diphosphate reductase small chain [Zea mays] gi|223943167|gb|ACN25667.1| unknown [Zea mays] Length = 339 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K + + R ++ +A +E + + +P VG+N Sbjct: 209 RDEGLHCDFACLLYDLLRG-------KLDESRVREIVADAVDIEREFVCDALPVALVGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EYQ+ + Sbjct: 262 GGLMSQYIEFVADRLLMALGHRKMYNVA-NPFDWM-ELISLQGKTNFFEKRVGEYQKASV 319 Query: 122 LK 123 + Sbjct: 320 MS 321 >gi|291244313|ref|XP_002742041.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like [Saccoglossus kowalevskii] Length = 463 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 68/122 (55%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL K +++ R ++ +A +E + +E +P G +G+N Sbjct: 337 RDEGLHCDFACLIFS-------HLTYKPSKERIRNIITQAVDIEKEFWNEALPVGLIGMN 389 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 Y++F+A+R ++ + ++ + ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 390 VTLMNYYVEFVADRLLLELNCDKVY-HRENPFDFM-ENISLEGKTNFFEKRVGEYQKANV 447 Query: 122 LK 123 + Sbjct: 448 MS 449 >gi|56118690|ref|NP_001007890.1| ribonucleotide reductase M2, gene 2 [Xenopus (Silurana) tropicalis] gi|51258920|gb|AAH80161.1| ribonucleotide reductase M2 polypeptide [Xenopus (Silurana) tropicalis] Length = 386 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ ++ +A +E + E +P +G+N Sbjct: 261 RDEGLHCDFACLMFK-------HLVNKPSEERVVQLITDAVQIEQEFLTEALPVNLIGMN 313 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +FK T NPF +M E I L+ + NFFE +V EYQ+ Sbjct: 314 CTLMKQYIEFVADRLLLELGFNKVFKAT-NPFDFM-ENISLEGKTNFFEKKVGEYQKMGV 371 Query: 122 LK 123 + Sbjct: 372 MS 373 >gi|89268988|emb|CAJ81953.1| ribonucleotide reductase m2 polypeptide [Xenopus (Silurana) tropicalis] gi|89269815|emb|CAJ81580.1| ribonucleotide reductase m2 polypeptide [Xenopus (Silurana) tropicalis] Length = 386 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ ++ +A +E + E +P +G+N Sbjct: 261 RDEGLHCDFACLMFK-------HLVNKPSEERVVQLITDAVQIEQEFLTEALPVNLIGMN 313 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +FK T NPF +M E I L+ + NFFE +V EYQ+ Sbjct: 314 CTLMKQYIEFVADRLLLELGFNKVFKAT-NPFDFM-ENISLEGKTNFFEKKVGEYQKMGV 371 Query: 122 LK 123 + Sbjct: 372 MS 373 >gi|189199548|ref|XP_001936111.1| ribonucleoside-diphosphate reductase subunit M2 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187983210|gb|EDU48698.1| ribonucleoside-diphosphate reductase subunit M2 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 410 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + L + ++ R ++ EA +E + + +P +G+N Sbjct: 267 RDEGMHTDFACLLFSL-------LNNRPSNEEVRAIITEAVEIEQEFLSDALPCALLGMN 319 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G ++ T NPF +M E I L + NFFE RV +YQ+ Sbjct: 320 ATLMCQYIEFVADRLLLALGNTKVYNAT-NPFDFM-ENISLAGKTNFFEKRVGDYQKAGV 377 Query: 122 L 122 + Sbjct: 378 M 378 >gi|72008642|ref|XP_780110.1| PREDICTED: similar to ribonucleotide reductase protein R2 class I isoform 1 [Strongylocentrotus purpuratus] gi|115928579|ref|XP_001179668.1| PREDICTED: similar to ribonucleotide reductase protein R2 class I [Strongylocentrotus purpuratus] Length = 412 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 67/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++ + ++ EA +E + + +P +G+N Sbjct: 282 RDEGLHCDFACLMFK-------HLNNKPDEEHVQGIIKEAVAIEQEFLTDALPCSLIGMN 334 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A ++Y++F+A+R ++G ++K ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 335 AVLMKRYIEFVADRLLVELGCGKIWK-VENPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 392 Query: 122 LK 123 + Sbjct: 393 MS 394 >gi|154337607|ref|XP_001565036.1| ribonucleoside-diphosphate reductase small chain [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062075|emb|CAM45178.1| putative ribonucleoside-diphosphate reductase small chain [Leishmania braziliensis MHOM/BR/75/M2904] Length = 392 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N Sbjct: 265 RDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G E + T+ PF +M E+I L+ + NFFE +V EYQ+ Sbjct: 319 AELMAQYIEFVADRLLVSLGEEKHYNATQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAGV 376 Query: 122 LK 123 + Sbjct: 377 MS 378 >gi|327261311|ref|XP_003215474.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like isoform 2 [Anolis carolinensis] Length = 390 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A +E + E +P +G+N Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPSEERVREIITNAVRIEQEFLTEALPVNLIGMN 317 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G ++K ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 318 CTLMKQYIEFVADRLILELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 375 Query: 122 LK 123 + Sbjct: 376 MS 377 >gi|266918|sp|P07201|RIR2_SPISO RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit; AltName: Full=p41 gi|10342|emb|CAA38919.1| M2 (small) subunit of ribonucleotide reductase [Spisula solidissima] Length = 384 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL K Q++ ++ EA +E + E +P +G+N Sbjct: 256 RDEGLHCDFACLMFS-------HLVNKPSQERIHQIIDEAVKIEQVFLTEALPCRLIGMN 308 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R ++ + L+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 309 CDLMRQYIEFVADRLLLELKCDKLYN-KENPFDFM-EHISLEGKTNFFEKRVGEYQKMGV 366 Query: 122 LK 123 + Sbjct: 367 MS 368 >gi|313675915|ref|YP_004053911.1| ribonucleoside-diphosphate reductase [Marivirga tractuosa DSM 4126] gi|312942613|gb|ADR21803.1| Ribonucleoside-diphosphate reductase [Marivirga tractuosa DSM 4126] Length = 331 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 69/122 (56%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N HL K ++K ++ +A +E + +++P +G+N Sbjct: 202 RDEGLHCDFACLLYN------DHLVNKLSKEKVTAIITDAVEIEKEFVTDSLPVKLIGMN 255 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R ++ + ++ + NPF +M E+I L+ + NFFE RV +YQ+ Sbjct: 256 ADLMCQYIEFVADRLLQELRCDKVY-GSSNPFDFM-EMISLQGKTNFFEKRVGDYQKAGV 313 Query: 122 LK 123 +K Sbjct: 314 MK 315 >gi|322493026|emb|CBZ28311.1| ribonucleoside-diphosphate reductase small chain,putative [Leishmania mexicana MHOM/GT/2001/U1103] Length = 388 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N Sbjct: 261 RDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 314 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G E + T+ PF +M E+I L+ + NFFE +V EYQ+ Sbjct: 315 AELMAQYIEFVADRLLVSLGEEKHYNSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAGV 372 Query: 122 LK 123 + Sbjct: 373 MS 374 >gi|312216546|emb|CBX96496.1| similar to ribonucleoside-diphosphate reductase subunit M2 [Leptosphaeria maculans] Length = 410 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + L T+ ++ + ++ EA +E + + +P +G+N Sbjct: 266 RDEGMHTDFACLLFSL-------LNTRPSKESVQAIITEAVEIEKEFLSDALPCALLGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G + T NPF +M E I L + NFFE RV +YQ+ Sbjct: 319 ATLMCQYIEFVADRLLLSLGNTKFYNAT-NPFDFM-ENISLAGKTNFFEKRVGDYQKAGV 376 Query: 122 L 122 + Sbjct: 377 M 377 >gi|291336894|gb|ADD96423.1| hypothetical protein [uncultured organism MedDCM-OCT-S09-C426] Length = 147 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 58/125 (46%), Positives = 83/125 (66%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH+NFG +IN +K + P +WTK+F++++ + +A LEI YAH+ +P+G +GL Sbjct: 22 LRDESLHINFGTYLINTLKEQYPTIWTKKFEEETIEHIKKAVQLEINYAHDVLPRGILGL 81 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA YM +I NRR IGL+ F+ NPFPW+SEV+D NFFE +V +YQ Sbjct: 82 NADMFVDYMHYIGNRRLEGIGLDYRFESDTNPFPWLSEVVDTGAMTNFFERKVKDYQNSG 141 Query: 121 ELKWD 125 L+ D Sbjct: 142 VLEDD 146 >gi|154340038|ref|XP_001565976.1| ribonucleoside-diphosphate reductase small chain [Leishmania braziliensis MHOM/BR/75/M2904] gi|134063294|emb|CAM45500.1| putative ribonucleoside-diphosphate reductase small chain [Leishmania braziliensis MHOM/BR/75/M2904] Length = 388 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N Sbjct: 261 RDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 314 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G E + T+ PF +M E+I L+ + NFFE +V EYQ+ Sbjct: 315 AELMAQYIEFVADRLLVSLGEEKHYNATQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAGV 372 Query: 122 LK 123 + Sbjct: 373 MS 374 >gi|121713826|ref|XP_001274524.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus clavatus NRRL 1] gi|119402677|gb|EAW13098.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus clavatus NRRL 1] Length = 405 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ ++ EA +E + + +P +G+N Sbjct: 268 RDEGLHTDFACLLFS-------HLNNRPDKKVVEDIIVEAVAIEQEFLTDALPVALLGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G + + + NPF +M E I L + NFFE RV +YQ+ Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYYN-SPNPFDFM-ESISLAGKTNFFEKRVGDYQKAGV 378 Query: 122 L 122 + Sbjct: 379 M 379 >gi|326917964|ref|XP_003205263.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like [Meleagris gallopavo] Length = 353 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +L + +++ R ++ A +E + E +P G +G+N Sbjct: 228 RDEGLHCDFACLMFH-------YLVNRPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F + ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 281 CTLMKQYIEFVADRLLMELGFSKVF-HAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 338 Query: 122 L 122 + Sbjct: 339 M 339 >gi|212533263|ref|XP_002146788.1| ribonucleotide reductase small subunit RnrA, putative [Penicillium marneffei ATCC 18224] gi|210072152|gb|EEA26241.1| ribonucleotide reductase small subunit RnrA, putative [Penicillium marneffei ATCC 18224] Length = 406 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL T+ + ++ +A +E + + +P +G+N Sbjct: 268 RDEGLHTDFACMLFS-------HLNTRPNPKVIEDIIVDAVAIEQEFLTDALPCALLGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G + + T NPF +M E I L + NFFE RV +YQ+ Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYYNAT-NPFDFM-ENISLAGKTNFFEKRVGDYQKAGV 378 Query: 122 LK 123 + Sbjct: 379 MN 380 >gi|146090952|ref|XP_001466403.1| ribonucleoside-diphosphate reductase small chain [Leishmania infantum JPCM5] gi|321399462|emb|CBZ08664.1| putative ribonucleoside-diphosphate reductase small chain [Leishmania infantum JPCM5] Length = 392 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N Sbjct: 265 RDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G E ++ T+ PF +M E+I L+ + NFFE +V EYQ+ Sbjct: 319 AELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAGV 376 Query: 122 LK 123 + Sbjct: 377 MS 378 >gi|4557845|ref|NP_001025.1| ribonucleoside-diphosphate reductase subunit M2 isoform 2 [Homo sapiens] gi|400979|sp|P31350|RIR2_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase subunit M2; AltName: Full=Ribonucleotide reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|36155|emb|CAA42181.1| small subunit ribonucleotide reductase [Homo sapiens] gi|251637|gb|AAA09577.1| ribonucleotide reductase R2 subunit [Homo sapiens] gi|12804875|gb|AAH01886.1| Ribonucleotide reductase M2 polypeptide [Homo sapiens] gi|14029165|gb|AAK51163.1| ribonucleotide reductase M2 subunit [Homo sapiens] gi|20988810|gb|AAH30154.1| Ribonucleotide reductase M2 polypeptide [Homo sapiens] gi|62702173|gb|AAX93099.1| unknown [Homo sapiens] gi|123981920|gb|ABM82789.1| ribonucleotide reductase M2 polypeptide [synthetic construct] gi|123996753|gb|ABM85978.1| ribonucleotide reductase M2 polypeptide [synthetic construct] gi|189053955|dbj|BAG36462.1| unnamed protein product [Homo sapiens] gi|261861600|dbj|BAI47322.1| ribonucleotide reductase M2 [synthetic construct] Length = 389 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A +E + E +P +G+N Sbjct: 264 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 316 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 317 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 374 Query: 122 LK 123 + Sbjct: 375 MS 376 >gi|148705043|gb|EDL36990.1| ribonucleotide reductase M2 [Mus musculus] Length = 411 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ R ++ A +E + E +P +G+N Sbjct: 286 RDEGLHCDFACLMFK-------HLVHKPAEQRVREIITNAVRIEQEFLTEALPVKLIGMN 338 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 339 CTLMKQYIEFVADRLMLELGFNKIFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 396 Query: 122 LK 123 + Sbjct: 397 MS 398 >gi|2500209|sp|Q60561|RIR2_MESAU RecName: Full=Ribonucleoside-diphosphate reductase subunit M2; AltName: Full=Ribonucleotide reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|49650|emb|CAA48232.1| ribonucleotide reductase [Mesocricetus auratus] Length = 386 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPSEQRVQEIITNAVRIEQEFLTEALPVKLIGMN 317 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +FK ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIFK-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 375 Query: 122 LK 123 + Sbjct: 376 MS 377 >gi|294055010|ref|YP_003548668.1| Ribonucleoside-diphosphate reductase [Coraliomargarita akajimensis DSM 45221] gi|293614343|gb|ADE54498.1| Ribonucleoside-diphosphate reductase [Coraliomargarita akajimensis DSM 45221] Length = 360 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 53/122 (43%), Positives = 81/122 (66%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES H+ ++I + EN +WT EF+++ R ++ EA LE + + +P VGL Sbjct: 231 LRDESNHIEVFRNLIMDLIEENEDVWTPEFREELRDLMREAVTLEKDFIRDCLPVNSVGL 290 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A QY+ +IA+RR +GL PL +NPFPW++E++D+KKE+NFFE RVTEYQ+ + Sbjct: 291 SADEFCQYIDYIADRRLEGVGLAPLSPGVDNPFPWLAEMMDIKKEQNFFEGRVTEYQKAS 350 Query: 121 EL 122 L Sbjct: 351 AL 352 >gi|224007863|ref|XP_002292891.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220971753|gb|EED90087.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 297 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 9/120 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +++ + P + ++ A +E + + +P +G+N Sbjct: 172 RDEGLHCDFACLLYSKLVNKLPE-------SRITKIITVAVEIEKEFVSDALPVELIGMN 224 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y++F A+R +G + T NPF WM E+I L+ + NFFE RV EY + Sbjct: 225 SKLMCDYIEFCADRLLGALGCSKFYNAT-NPFEWM-EMISLQGKTNFFEKRVGEYAKSGV 282 >gi|148230557|ref|NP_001080772.1| ribonucleotide reductase M2 polypeptide [Xenopus laevis] gi|28839018|gb|AAH47975.1| Rrm2-prov protein [Xenopus laevis] Length = 386 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ ++ A +E + E +P +G+N Sbjct: 261 RDEGLHCDFACLMFR-------HLVHKPSEERVVQLITNAVQIEQEFLTEALPVNLIGMN 313 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +FK NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 314 CTLMKQYIEFVADRLLLELGFNKVFK-ASNPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 371 Query: 122 LK 123 + Sbjct: 372 MS 373 >gi|255530602|ref|YP_003090974.1| Ribonucleoside-diphosphate reductase [Pedobacter heparinus DSM 2366] gi|255343586|gb|ACU02912.1| Ribonucleoside-diphosphate reductase [Pedobacter heparinus DSM 2366] Length = 324 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F + +K K Q++ ++ +A +E + + +P +G+N Sbjct: 197 RDEGSHCEFACLLYGMLK-------NKLSQEQVHGIIRDAVEIEKEFVTDALPVALIGMN 249 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R ++G ++ T NPF +M E+I L+ + NFFE RV +YQ+ Sbjct: 250 AKLMSQYIEFVADRWLQELGYSKIYNAT-NPFDFM-EMISLQGKTNFFEKRVGDYQKSGV 307 Query: 122 LK 123 L Sbjct: 308 LT 309 >gi|242777635|ref|XP_002479074.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces stipitatus ATCC 10500] gi|218722693|gb|EED22111.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces stipitatus ATCC 10500] Length = 406 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + + ++ +A +E + + +P +G+N Sbjct: 268 RDEGLHTDFACLLFS-------HLNNRPNPKVIEDIIVDAVAIEQEFLTDALPCSLLGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G + + + NPF +M E I L + NFFE RV +YQ+ Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYYN-STNPFDFM-ENISLAGKTNFFEKRVGDYQKAGV 378 Query: 122 LK 123 + Sbjct: 379 MN 380 >gi|49899161|gb|AAH75746.1| Ribonucleotide reductase M2 polypeptide [Danio rerio] Length = 386 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL +K ++ + ++ A +E + + +P +G+N Sbjct: 261 RDEGLHCDFACLMFK-------HLISKPSEETVKKIIMNAVEIEQEFLTDALPVKLIGMN 313 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G + +++ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 314 CDLMKQYIEFVADRLLLELGFDKVYR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 371 Query: 122 LK 123 + Sbjct: 372 MS 373 >gi|119174781|ref|XP_001239725.1| hypothetical protein CIMG_09346 [Coccidioides immitis RS] Length = 408 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + + + ++ EA +E + + +P +G+N Sbjct: 272 RDEGLHTDFACLLFS-------HLRHRPGPEAVQAIITEAVEIEKEFLTDALPCALLGMN 324 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G + + T NPF +M I L + NFFE RV +YQ+ Sbjct: 325 SKLMCQYIEFVADRLLVALGNKKFYNAT-NPFDFMD-NISLSGKTNFFEKRVGDYQKAGV 382 Query: 122 L 122 + Sbjct: 383 M 383 >gi|110636874|ref|YP_677081.1| ribonucleoside-diphosphate reductase 1 subunit beta [Cytophaga hutchinsonii ATCC 33406] gi|110279555|gb|ABG57741.1| ribonucleoside-diphosphate reductase 1, beta subunit [Cytophaga hutchinsonii ATCC 33406] Length = 324 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 8/121 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + + K ++ ++ EA +E + +++P +G+N Sbjct: 198 RDEGLHCDFACLLYTKY------INNKLPAERVIQIILEAVEIEKEFVTDSLPVDLIGMN 251 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A +QY++F+A+R +G+ F T NPF +M E+I L+ + NFFE RV+EYQ+ Sbjct: 252 ARLMQQYIEFVADRLLVALGVPKQFNAT-NPFDFM-EMISLQGKTNFFEKRVSEYQKSGV 309 Query: 122 L 122 + Sbjct: 310 M 310 >gi|159465835|ref|XP_001691128.1| ribonucleoside-diphosphate reductase small chain [Chlamydomonas reinhardtii] gi|158279814|gb|EDP05574.1| ribonucleoside-diphosphate reductase small chain [Chlamydomonas reinhardtii] Length = 394 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + L T+ + + + ++ EA +E + E +P +G+N Sbjct: 267 RDEGLHCDFACMLFSM-------LNTRIDETRVKQIIVEAVEIEQEFCTEALPVDLIGMN 319 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY+QF+A+R +G + NPF +M E+I L+ + NFFE RV +YQ+ Sbjct: 320 SRLMAQYIQFVADRLLVSLGCAKQYNVV-NPFEFM-EMISLQGKTNFFEKRVGDYQKNGV 377 Query: 122 L 122 + Sbjct: 378 M 378 >gi|303314521|ref|XP_003067269.1| ribonucleoside-diphosphate reductase small chain, putative [Coccidioides posadasii C735 delta SOWgp] gi|240106937|gb|EER25124.1| ribonucleoside-diphosphate reductase small chain, putative [Coccidioides posadasii C735 delta SOWgp] gi|320037571|gb|EFW19508.1| ribonucleoside-diphosphate reductase small subunit [Coccidioides posadasii str. Silveira] Length = 408 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + + + ++ EA +E + + +P +G+N Sbjct: 272 RDEGLHTDFACLLFS-------HLRHRPGPEAVQAIITEAVEIEKEFLTDALPCALLGMN 324 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G + + T NPF +M I L + NFFE RV +YQ+ Sbjct: 325 SKLMCQYIEFVADRLLVALGNKKFYNAT-NPFDFMD-NISLSGKTNFFEKRVGDYQKAGV 382 Query: 122 L 122 + Sbjct: 383 M 383 >gi|76630263|ref|XP_880783.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 3 [Bos taurus] gi|297480612|ref|XP_002691528.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 2 [Bos taurus] gi|296482362|gb|DAA24477.1| ribonucleotide reductase M2 polypeptide isoform 2 [Bos taurus] Length = 341 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N Sbjct: 216 RDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMN 268 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 269 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 326 Query: 122 LK 123 + Sbjct: 327 MS 328 >gi|3220181|gb|AAC23560.1| ribonucleotide reductase M2 subunit [Leishmania amazonensis] Length = 354 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N Sbjct: 227 RDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G E + T+ PF +M E+I L+ + NFFE +V EYQ+ Sbjct: 281 AELMAQYIEFVADRLLVSLGEEKHYNSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAGV 338 Query: 122 LK 123 + Sbjct: 339 MS 340 >gi|73544537|ref|XP_848163.1| ribonucleoside-diphosphate reductase small chain [Leishmania major strain Friedlin] gi|321438516|emb|CBZ12275.1| putative ribonucleoside-diphosphate reductase small chain [Leishmania major strain Friedlin] Length = 388 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N Sbjct: 261 RDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 314 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G E ++ T+ PF +M E+I L+ + NFFE RV EYQ+ Sbjct: 315 AELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFFEKRVGEYQKAGV 372 Query: 122 LK 123 + Sbjct: 373 MS 374 >gi|118087248|ref|XP_418364.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 353 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +L + +++ R ++ A +E + E +P G +G+N Sbjct: 228 RDEGLHCDFACLMFH-------YLVNRPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F + ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 281 CTLMKQYIEFVADRLLMELGFSKVF-HAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 338 Query: 122 L 122 + Sbjct: 339 M 339 >gi|88682973|gb|AAI05512.1| RRM2 protein [Bos taurus] Length = 338 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N Sbjct: 213 RDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMN 265 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 266 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 323 Query: 122 LK 123 + Sbjct: 324 MS 325 >gi|226294144|gb|EEH49564.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides brasiliensis Pb18] Length = 325 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + + + ++ EA +E + + +P +G+N Sbjct: 186 RDEGLHTDFACLLFS-------HLRHRPSPEAVQKIITEAVAIEQEFLTDALPCALLGMN 238 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G + ++ + NPF +M I L + NFFE RV +YQ+ Sbjct: 239 AKLMCQYIEFVADRLLVALGNKKVYN-STNPFDFMD-NISLTGKTNFFEKRVGDYQKAGV 296 Query: 122 L 122 + Sbjct: 297 M 297 >gi|312381384|gb|EFR27142.1| hypothetical protein AND_06323 [Anopheles darlingi] Length = 390 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 67/121 (55%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ ++ +A ++E + + +P +G+N Sbjct: 265 RDEGLHCDFACLMFK-------YLVQKPSRKRVTDIIRDAVMIEQEFLTKALPVDMLGMN 317 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R ++G E ++ T+NPF +M E I L+ + NFFE +V EYQ+ Sbjct: 318 CELMSQYIEFVADRLLVELGCEKVYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQKWGV 375 Query: 122 L 122 + Sbjct: 376 M 376 >gi|145349720|ref|XP_001419276.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579507|gb|ABO97569.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 329 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + L K ++ R ++ EA +E + +++P VG+N Sbjct: 201 RDEGLHRDFACLLFSM-------LNNKPSEETIRKIVTEAVEIEKEFVCDSLPCALVGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A Y++++A+ +GL + T NPF WM E+I L+ + NFFE RV EYQ+ Sbjct: 254 AGMMSDYIEYVADHLFCSLGLAKEYN-TTNPFDWM-ELISLQGKTNFFEKRVGEYQKAGV 311 Query: 122 LK 123 + Sbjct: 312 MN 313 >gi|149728153|ref|XP_001502384.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase subunit M2 (Ribonucleotide reductase small subunit) (Ribonucleotide reductase small chain) [Equus caballus] Length = 425 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N Sbjct: 300 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIIINAVRIEQEFLTEALPVRLIGMN 352 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 353 CALMKQYIEFVADRLLLELGFNKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 410 Query: 122 LK 123 + Sbjct: 411 MS 412 >gi|169613737|ref|XP_001800285.1| hypothetical protein SNOG_10001 [Phaeosphaeria nodorum SN15] gi|111061216|gb|EAT82336.1| hypothetical protein SNOG_10001 [Phaeosphaeria nodorum SN15] Length = 409 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + L T+ + + ++ EA +E + E +P +G+N Sbjct: 267 RDEGMHTDFACLLFSL-------LNTRPSKDAVKAIITEAVEIEQEFLTEALPCALLGMN 319 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G ++ T NPF +M E I L + NFFE RV +YQ+ Sbjct: 320 STLMCQYIEFVADRLLLALGNTKVYNAT-NPFDFM-ENISLAGKTNFFEKRVGDYQKAGV 377 Query: 122 L 122 + Sbjct: 378 M 378 >gi|3914644|sp|O46310|RIR2_LEIAM RecName: Full=Ribonucleoside-diphosphate reductase small subunit; AltName: Full=Ribonucleotide reductase M2 subunit; AltName: Full=Ribonucleotide reductase small subunit gi|2828563|gb|AAC08302.1| ribonucleotide reductase M2 subunit [Leishmania amazonensis] Length = 345 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N Sbjct: 218 RDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 271 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G E ++ T+ PF +M E+I L+ + NFFE RV EYQ+ Sbjct: 272 AELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFFEKRVGEYQKAGV 329 Query: 122 LK 123 + Sbjct: 330 MS 331 >gi|302409182|ref|XP_003002425.1| ribonucleoside-diphosphate reductase small chain [Verticillium albo-atrum VaMs.102] gi|261358458|gb|EEY20886.1| ribonucleoside-diphosphate reductase small chain [Verticillium albo-atrum VaMs.102] Length = 414 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +Q + ++ +A +E + E +P G +G+N Sbjct: 276 RDEGLHTDFACLLFS-------HLNNRPSKQTVQDIVTDAVNIEQEFLTEALPCGLLGMN 328 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A +QY++F+A+R +G E ++K T NPF +M E I L + NFFE RV +YQ+ Sbjct: 329 ATLMKQYIEFVADRLLVALGNEKVYKAT-NPFDFM-ENISLGGKTNFFEKRVADYQKAGV 386 Query: 122 L 122 + Sbjct: 387 M 387 >gi|301772278|ref|XP_002921557.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like [Ailuropoda melanoleuca] Length = 393 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ R ++ A +E + E +P +G+N Sbjct: 268 RDEGLHCDFACLMFK-------HLVHKPSEQRVREIIINAVRIEQEFLTEALPVKLIGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 321 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 378 Query: 122 LK 123 + Sbjct: 379 MS 380 >gi|289620013|emb|CBI53457.1| unnamed protein product [Sordaria macrospora] Length = 410 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +Q + ++ +A +E + E +P +G+N Sbjct: 272 RDEGLHTDFACLLFS-------HLNNRPSKQLIQDIIVDAVRIEQEFLTEALPCALLGMN 324 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A +QY++F+A+R +G E +++ + NPF +M E I L + NFFE RV +YQ+ Sbjct: 325 ADLMKQYIEFVADRLLVALGNEKVYR-STNPFDFM-ENISLGGKTNFFEKRVADYQKAGV 382 Query: 122 LK 123 + Sbjct: 383 MN 384 >gi|7106399|ref|NP_033130.1| ribonucleoside-diphosphate reductase subunit M2 [Mus musculus] gi|132626|sp|P11157|RIR2_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2; AltName: Full=Ribonucleotide reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|22218698|pdb|1H0N|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase To Model The Reactive Diferrous State gi|22218699|pdb|1H0O|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase To Model The Reactive Diferrous State gi|52696260|pdb|1W68|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase Subunit R2 Under Oxidizing Conditions. A Fully Occupied Dinuclear Iron Cluster. gi|52696261|pdb|1W69|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase Subunit R2 Under Reducing Conditions. A Fully Occupied Dinuclear Iron Cluster And Bound Acetate. gi|157834262|pdb|1XSM|A Chain A, Protein R2 Of Ribonucleotide Reductase From Mouse gi|50720|emb|CAA33707.1| M2 ribonucleotide reductase [Mus musculus] gi|200768|gb|AAA40062.1| ribonucleotide reductase subunit M2 [Mus musculus] gi|26354034|dbj|BAC40647.1| unnamed protein product [Mus musculus] gi|54887418|gb|AAH85136.1| Ribonucleotide reductase M2 [Mus musculus] gi|74139292|dbj|BAE40793.1| unnamed protein product [Mus musculus] gi|74151119|dbj|BAE27683.1| unnamed protein product [Mus musculus] gi|74179887|dbj|BAE36508.1| unnamed protein product [Mus musculus] gi|74188932|dbj|BAE39238.1| unnamed protein product [Mus musculus] gi|74189151|dbj|BAE39331.1| unnamed protein product [Mus musculus] gi|74206394|dbj|BAE24918.1| unnamed protein product [Mus musculus] gi|74211991|dbj|BAE40165.1| unnamed protein product [Mus musculus] Length = 390 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ R ++ A +E + E +P +G+N Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPAEQRVREIITNAVRIEQEFLTEALPVKLIGMN 317 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 375 Query: 122 LK 123 + Sbjct: 376 MS 377 >gi|293343290|ref|XP_002725449.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like [Rattus norvegicus] gi|293355176|ref|XP_002728627.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Rattus norvegicus] Length = 390 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIITNAVRIEQEFLTEALPVKLIGMN 317 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +FK ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIFK-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 375 Query: 122 LK 123 + Sbjct: 376 MS 377 >gi|145249942|ref|XP_001401310.1| ribonucleoside-diphosphate reductase small chain [Aspergillus niger CBS 513.88] gi|134081995|emb|CAK46680.1| unnamed protein product [Aspergillus niger] Length = 396 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +Q ++ EA +E + + +P +G+N Sbjct: 263 RDEGLHTDFACLLFS-------HLNNRPSKQVVEDIIVEAVGIEQEFLTDALPVALLGMN 315 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G + + T NPF +M E I L + NFFE RV +YQ+ Sbjct: 316 SKLMCQYIEFVADRLLVALGNKKYYNAT-NPFDFM-ESISLAGKTNFFEKRVGDYQKAGV 373 Query: 122 L 122 + Sbjct: 374 M 374 >gi|116191729|ref|XP_001221677.1| hypothetical protein CHGG_05582 [Chaetomium globosum CBS 148.51] gi|88181495|gb|EAQ88963.1| hypothetical protein CHGG_05582 [Chaetomium globosum CBS 148.51] Length = 409 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +Q ++ +A +E + E +P +G+N Sbjct: 271 RDEGLHTDFACLLFS-------HLNNRPSKQIIEDIIVDAVRIEQEFLTEALPCALLGMN 323 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +QY++F+A+R +G E +++ + NPF +M E I L + NFFE RV EYQ+ Sbjct: 324 SNLMKQYIEFVADRLLVALGNEKVYR-STNPFDFM-ENISLGGKTNFFEKRVGEYQKAGV 381 Query: 122 L 122 + Sbjct: 382 M 382 >gi|295670491|ref|XP_002795793.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides brasiliensis Pb01] gi|226284878|gb|EEH40444.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides brasiliensis Pb01] Length = 325 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + + + ++ EA +E + + +P +G+N Sbjct: 186 RDEGLHTDFACLLFS-------HLRHRPSPEAVQKIITEAVAIEQEFLTDALPCALLGMN 238 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G + ++ + NPF +M I L + NFFE RV +YQ+ Sbjct: 239 AKLMCQYIEFVADRLLVALGNKKVYN-STNPFDFMD-NISLTGKTNFFEKRVGDYQKAGV 296 Query: 122 L 122 + Sbjct: 297 M 297 >gi|85109237|ref|XP_962820.1| ribonucleoside-diphosphate reductase M2 subunit [Neurospora crassa OR74A] gi|30316285|sp|Q9C167|RIR2_NEUCR RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|16273691|gb|AAK14804.2| small subunit of ribonucleotide reductase [Neurospora crassa] gi|28924456|gb|EAA33584.1| ribonucleoside-diphosphate reductase M2 subunit [Neurospora crassa OR74A] Length = 410 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +Q + ++ +A +E + E +P +G+N Sbjct: 272 RDEGLHTDFACLLFS-------HLNNRPSKQLIQEIIVDAVRIEQEFLTEALPCALLGMN 324 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A +QY++F+A+R +G E +++ + NPF +M E I L + NFFE RV +YQ+ Sbjct: 325 ADLMKQYIEFVADRLLVALGNEKIYR-STNPFDFM-ENISLGGKTNFFEKRVGDYQKAGV 382 Query: 122 LK 123 + Sbjct: 383 MN 384 >gi|110763195|ref|XP_397443.3| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 isoform 1 [Apis mellifera] Length = 384 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 9/123 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K ++ +++ +A +E + + +P +G+N Sbjct: 259 RDEGLHCDFACLMFK-------HIVQKPSCERVTSIIKDAVKIEQEFLTDALPVEMIGMN 311 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R ++G + ++ +ENPF +M E I L+ + NFFE +V EYQ+ Sbjct: 312 CKLMCQYIEFVADRLLVELGCKKIY-MSENPFDFM-EHISLEGKTNFFEKKVGEYQKWGV 369 Query: 122 LKW 124 ++ Sbjct: 370 MQD 372 >gi|148232385|ref|NP_001085389.1| ribonucleotide reductase M2, gene 1 [Xenopus laevis] gi|48735122|gb|AAH72071.1| MGC78958 protein [Xenopus laevis] Length = 406 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K +Q+ R ++ +A +E + E +P +G+N Sbjct: 281 RDEGLHTDFACLLFK-------HVVHKPSEQRVREIIIDAVKIEQEFLTEALPVELIGMN 333 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G + +FK +ENPF +M E I L+ + NFFE +V EYQ+ Sbjct: 334 CTLMKQYIEFVADRLLLELGFKKIFK-SENPFDFM-ENISLEGKTNFFEKKVGEYQKMGV 391 Query: 122 L 122 + Sbjct: 392 M 392 >gi|328855581|gb|EGG04707.1| hypothetical protein MELLADRAFT_49061 [Melampsora larici-populina 98AG31] Length = 385 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + + PH T + ++ +A +E + + +P +G+N Sbjct: 248 RDEGLHTDFACLLFSHL-ERRPHPDT------VQAIISQAVEIEKEFLSDALPCKLIGMN 300 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G + + ENPF +M E+I L + NFFE RV++Y + Sbjct: 301 ADLMCQYIEFVADRLLVALGNDKFYN-AENPFDFM-EMISLSGKTNFFEKRVSDYAKAGV 358 Query: 122 LK 123 + Sbjct: 359 MT 360 >gi|301774462|ref|XP_002922647.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like [Ailuropoda melanoleuca] Length = 387 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ A +E + E +P G +G+N Sbjct: 262 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 314 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ A Sbjct: 315 CVLMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVAEYQRFAV 372 Query: 122 L 122 + Sbjct: 373 M 373 >gi|74207686|dbj|BAE40088.1| unnamed protein product [Mus musculus] Length = 390 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ R ++ A +E + E +P +G+N Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPAEQRVREIITNAVRIEQEFLTEALPVKLIGMN 317 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 375 Query: 122 LK 123 + Sbjct: 376 MS 377 >gi|326437649|gb|EGD83219.1| ribonucleotide reductase M2 B [Salpingoeca sp. ATCC 50818] Length = 408 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 68/121 (56%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + + + P +++ ++ +A +E + E +P +G+N Sbjct: 280 RDEGLHCDFACLMFSMLHKKPP-------KERVIGIIMDAVEIEQEFLTEALPVSLLGMN 332 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +Y++F+++R +G + ++ T NPFP+M E I ++ + NFFE RV+EYQ+ Sbjct: 333 STLMREYIEFVSDRLLVSLGYDKVYNAT-NPFPFM-ENISIEGKTNFFERRVSEYQKSGV 390 Query: 122 L 122 + Sbjct: 391 M 391 >gi|8101697|gb|AAF72618.1|AF252539_2 ribonucleotide reductase small subunit M2 [Leishmania amazonensis] Length = 345 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N Sbjct: 218 RDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 271 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G E ++ T+ PF +M E+I L+ + NFFE RV EYQ+ Sbjct: 272 AELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFFEKRVGEYQKAGV 329 Query: 122 LK 123 + Sbjct: 330 MS 331 >gi|327403795|ref|YP_004344633.1| Ribonucleoside-diphosphate reductase [Fluviicola taffensis DSM 16823] gi|327319303|gb|AEA43795.1| Ribonucleoside-diphosphate reductase [Fluviicola taffensis DSM 16823] Length = 324 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 67/122 (54%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +++ + ++ +A +E + + +P +G+N Sbjct: 198 RDEGLHCDFACLLYTK------HLIHQLSKEQVQEIILDAVEIEKEFVTDALPVKLIGMN 251 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R ++G +F T NPF +M +I ++ + NFFE RV EYQ+ Sbjct: 252 ADLMAQYIEFVADRLLTELGNPKVFN-TTNPFDFMD-MISIQGKTNFFEKRVAEYQKSGV 309 Query: 122 LK 123 + Sbjct: 310 MS 311 >gi|301097698|ref|XP_002897943.1| ribonucleoside-diphosphate reductase small chain [Phytophthora infestans T30-4] gi|262106388|gb|EEY64440.1| ribonucleoside-diphosphate reductase small chain [Phytophthora infestans T30-4] Length = 360 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 65/120 (54%), Gaps = 9/120 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + +++ + P + ++ +A +E + +++P +G+N Sbjct: 235 RDEGMHTDFACLMYSKLVNKLPE-------SRVHEIIRDAVAIEHEFVCDSLPVELIGMN 287 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R + +G+ ++ +NPF WM +I L+ + NFFE RV EY + Sbjct: 288 SALMCQYIEFVADRLLYSLGVSKIYN-VKNPFDWMD-MISLQGKTNFFEKRVGEYSKAGV 345 >gi|156387377|ref|XP_001634180.1| predicted protein [Nematostella vectensis] gi|156221260|gb|EDO42117.1| predicted protein [Nematostella vectensis] Length = 341 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K ++ R ++ +A ++E + +P +G+N Sbjct: 216 RDEGLHCDFACLMYK-------YLVNKPDEETVRGIIKDAVVIEQEFLTSALPVKLIGMN 268 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R + + ++ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 269 CALMRQYIEFVADRLLVALNCQKVYN-VENPFDFM-ENISLEGKTNFFEKRVGEYQKSGV 326 Query: 122 LK 123 + Sbjct: 327 MS 328 >gi|76630259|ref|XP_584910.2| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos taurus] gi|297480610|ref|XP_002691527.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos taurus] gi|296482361|gb|DAA24476.1| ribonucleotide reductase M2 polypeptide isoform 1 [Bos taurus] Length = 389 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N Sbjct: 264 RDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMN 316 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 317 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 374 Query: 122 LK 123 + Sbjct: 375 MS 376 >gi|322709430|gb|EFZ01006.1| ribonucleoside-diphosphate reductase M2 subunit [Metarhizium anisopliae ARSEF 23] Length = 414 Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +Q ++ +A +E + E +P +G+N Sbjct: 276 RDEGLHTDFACLL-------HSHLKNRASKQVIYDIITDAVAIEQEFLTEALPCALLGMN 328 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +QY++F+A+R +G E ++K T NPF +M E I L + NFFE RV +YQ+ Sbjct: 329 SNLMKQYIEFVADRLLVALGNEKVYK-TSNPFDFM-ENISLGGKTNFFEKRVGDYQKAGV 386 Query: 122 L 122 L Sbjct: 387 L 387 >gi|146090970|ref|XP_001466408.1| ribonucleoside-diphosphate reductase small chain [Leishmania infantum JPCM5] gi|134070770|emb|CAM69127.1| putative ribonucleoside-diphosphate reductase small chain [Leishmania infantum JPCM5] Length = 388 Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N Sbjct: 261 RDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 314 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G E ++ T+ PF +M E+I L+ + NFFE +V EYQ+ Sbjct: 315 AELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAGV 372 Query: 122 LK 123 + Sbjct: 373 MS 374 >gi|45360749|ref|NP_989048.1| ribonucleotide reductase M2, gene 1 [Xenopus (Silurana) tropicalis] gi|38174078|gb|AAH61353.1| ribonucleotide reductase M2 polypeptide [Xenopus (Silurana) tropicalis] Length = 378 Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 69/122 (56%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K +Q+ R ++ +A +E + E +P +G+N Sbjct: 253 RDEGLHTDFACLLFK-------HVVHKPSEQRVREIIIDAVKIEQEFLTEALPVELIGMN 305 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G + +FK +ENPF +M E I L+ + NFFE +V EYQ+ Sbjct: 306 CKLMKQYIEFVADRLLLELGFKKIFK-SENPFDFM-ENISLEGKTNFFEKKVAEYQKMGV 363 Query: 122 LK 123 + Sbjct: 364 MS 365 >gi|302843870|ref|XP_002953476.1| hypothetical protein VOLCADRAFT_109884 [Volvox carteri f. nagariensis] gi|300261235|gb|EFJ45449.1| hypothetical protein VOLCADRAFT_109884 [Volvox carteri f. nagariensis] Length = 400 Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + + + + + ++ EA +E + + +P +G+N Sbjct: 273 RDEGLHCDFACLLYGMLSK-------QLEESRIKEIICEAVDIENEFCTDALPVDLIGMN 325 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G + T NPF +M +I L+ + NFFE RV +YQ+ Sbjct: 326 SRLMAQYIEFVADRLLVALGCSKAYNVT-NPFDFMD-MISLQGKTNFFEKRVGDYQKSGV 383 Query: 122 L 122 + Sbjct: 384 M 384 >gi|321476700|gb|EFX87660.1| hypothetical protein DAPPUDRAFT_306462 [Daphnia pulex] Length = 378 Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ +++ A +E + + +P +G+N Sbjct: 251 RDEGLHTDFACVMFK-------HLVNKPPKERIIEIINNAVKIEQEFLTDALPVEMIGMN 303 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R ++G L+ +ENPF +M E I L+ + NFFE +V EYQ+ Sbjct: 304 CRLMRQYIEFVADRLLLELGCTKLYN-SENPFDFM-EHISLEGKTNFFEKKVGEYQKAGV 361 Query: 122 LK 123 + Sbjct: 362 MN 363 >gi|115387427|ref|XP_001211219.1| ribonucleoside-diphosphate reductase small chain [Aspergillus terreus NIH2624] gi|114195303|gb|EAU37003.1| ribonucleoside-diphosphate reductase small chain [Aspergillus terreus NIH2624] Length = 401 Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +Q ++ EA +E + + +P +G+N Sbjct: 267 RDEGLHTDFACLLFS-------HLNNRPSKQVVEDIIVEAVAIEKEFLTDALPVALLGMN 319 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G F ++ NPF +M E I L + NFFE RV +YQ+ Sbjct: 320 SKLMCQYIEFVADRLLVALGNNKYF-HSTNPFDFM-ESISLAGKTNFFEKRVGDYQKAGV 377 Query: 122 L 122 + Sbjct: 378 M 378 >gi|300676950|gb|ADK26821.1| ribonucleotide reductase M2 [Zonotrichia albicollis] Length = 390 Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A L+E + E +P +G+N Sbjct: 265 RDEGLHCDFACLMFK-------HLIHKPSEERVREIIMNAVLIEQEFLTEALPVKLIGMN 317 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G ++K ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 375 Query: 122 LK 123 + Sbjct: 376 MS 377 >gi|145537171|ref|XP_001454302.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124422057|emb|CAK86905.1| unnamed protein product [Paramecium tetraurelia] Length = 507 Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K Q+ ++ A +E + E +P +G+N Sbjct: 382 RDEGLHTDFACLLYK-------HMINKLSIQRVHEIISSAVEIEKEFISEALPVELIGMN 434 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +QY++F+A+R +G ++ ++NPF WM +I L+ + NFFE RV +YQ+ Sbjct: 435 SNLMKQYIEFVADRLIFALGAPKIYN-SKNPFEWMD-MISLQGKTNFFERRVGDYQKAGV 492 Query: 122 LK 123 + Sbjct: 493 MS 494 >gi|75076588|sp|Q4R741|RIR2B_MACFA RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B gi|67969468|dbj|BAE01083.1| unnamed protein product [Macaca fascicularis] Length = 351 Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVQIEQEFLTEALPVGLIGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 279 CILMKQYIEFVADRLLVELGFSKIF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336 Query: 122 L 122 + Sbjct: 337 M 337 >gi|47213105|emb|CAF89525.1| unnamed protein product [Tetraodon nigroviridis] Length = 198 Score = 160 bits (407), Expect = 5e-38, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K Q ++ A +E + E +P +G+N Sbjct: 73 RDEGLHCDFACLMFK-------HLLHKPSAQTVGAIIRNAVEIEQEFLTEALPVKLIGMN 125 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 ++Y++F+A+R ++G +++ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 126 CQLMKRYIEFVADRLLLELGFAKIYR-AENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 183 Query: 122 L 122 + Sbjct: 184 M 184 >gi|225561749|gb|EEH10029.1| ribonucleotide reductase M2 B [Ajellomyces capsulatus G186AR] gi|240275354|gb|EER38868.1| ribonucleoside-diphosphate reductase subunit small [Ajellomyces capsulatus H143] gi|325091193|gb|EGC44503.1| ribonucleoside-diphosphate reductase subunit small [Ajellomyces capsulatus H88] Length = 413 Score = 160 bits (407), Expect = 5e-38, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + + ++ EA +E + + +P +G+N Sbjct: 274 RDEGLHTDFACLLFS-------HLRHRPSPEAVEKIITEAVTIEQEFLSDALPVALLGMN 326 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G + ++ + NPF +M I L + NFFE RV +YQ+ Sbjct: 327 AKLMCQYIEFVADRLLVALGNKKVYN-STNPFDFMD-NISLAGKTNFFEKRVGDYQKAGV 384 Query: 122 L 122 + Sbjct: 385 M 385 >gi|75076796|sp|Q4R7Q7|RIR2_MACFA RecName: Full=Ribonucleoside-diphosphate reductase subunit M2; AltName: Full=Ribonucleotide reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|67969020|dbj|BAE00865.1| unnamed protein product [Macaca fascicularis] Length = 389 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A +E + E +P +G+N Sbjct: 264 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRVEQEFLTEALPVKLIGMN 316 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 317 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 374 Query: 122 LK 123 + Sbjct: 375 MS 376 >gi|73979721|ref|XP_540076.2| PREDICTED: similar to Ribonucleoside-diphosphate reductase M2 chain (Ribonucleotide reductase small chain) isoform 1 [Canis familiaris] Length = 394 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N Sbjct: 269 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIIINAVRIEQEFLTEALPVKLIGMN 321 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 322 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 379 Query: 122 LK 123 + Sbjct: 380 MS 381 >gi|213511642|ref|NP_001133495.1| Ribonucleoside-diphosphate reductase subunit M2 [Salmo salar] gi|209154228|gb|ACI33346.1| Ribonucleoside-diphosphate reductase subunit M2 [Salmo salar] Length = 387 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++ ++ A +E + + +P +G+N Sbjct: 262 RDEGLHCDFACLMFK-------HLVHKPSKETVTKLIRNAVEIEQEFLTKALPVKLIGMN 314 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R ++G + +++ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 315 CDLMTQYIEFVADRLMLELGFDKIYR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 372 Query: 122 LK 123 + Sbjct: 373 MS 374 >gi|296421312|ref|XP_002840209.1| hypothetical protein [Tuber melanosporum Mel28] gi|295636423|emb|CAZ84400.1| unnamed protein product [Tuber melanosporum] Length = 397 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N HL + QQ + ++ EA +E + E +P +G+N Sbjct: 262 RDEGLHTDFACLLFN-------HLNNRPSQQAVQDIIVEAVGIEQEFLTEALPCALLGMN 314 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +QY++F+A+R +G + T NPF +M E I L + NFFE RV +YQ+ Sbjct: 315 SKLMKQYIEFVADRLLLSLGNPKFYNAT-NPFDFM-ESISLAGKTNFFEKRVGDYQKAGV 372 Query: 122 L 122 + Sbjct: 373 M 373 >gi|223996990|ref|XP_002288168.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220975276|gb|EED93604.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 335 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 9/120 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +++ + P + ++ A +E + + +P +G+N Sbjct: 210 RDEGLHCDFACLIYSKLVNQLPE-------SRIEEIITNAVEIEKEFVSDALPVELIGMN 262 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F A+R +G + + NPF WM E+I L+ + NFFE RV EY + Sbjct: 263 SKLMCQYIEFCADRLLGALGCKKHYMAV-NPFEWM-EMISLQGKTNFFEKRVGEYAKSGV 320 >gi|326403282|ref|YP_004283363.1| ribonucleoside-diphosphate reductase beta subunit [Acidiphilium multivorum AIU301] gi|325050143|dbj|BAJ80481.1| ribonucleoside-diphosphate reductase beta subunit [Acidiphilium multivorum AIU301] Length = 338 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59 +RDESLH N I + ENP +WT+E +++ E A+ G Sbjct: 208 VRDESLHCNSVIKLFRTFVAENPEIWTEELRREIYLCCATIVDHEDAFIDLAFEFGAVEG 267 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A ++Y+++IA+RR Q+GL PLF +NP PW+ E+++ + NFFE R TEY + Sbjct: 268 LTAEEVKRYIRYIADRRLLQLGLNPLFHVDKNPLPWLDEMLNAVEHTNFFENRATEYSKA 327 Query: 120 A-ELKWD 125 + WD Sbjct: 328 STAGSWD 334 >gi|148259750|ref|YP_001233877.1| ribonucleotide-diphosphate reductase subunit beta [Acidiphilium cryptum JF-5] gi|146401431|gb|ABQ29958.1| Ribonucleoside-diphosphate reductase [Acidiphilium cryptum JF-5] Length = 338 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59 +RDESLH N I + ENP +WT+E +++ E A+ G Sbjct: 208 VRDESLHCNSVIKLFRTFVAENPEIWTEELRREIYLCCATIVDHEDAFIDLAFEFGAVEG 267 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A ++Y+++IA+RR Q+GL PLF +NP PW+ E+++ + NFFE R TEY + Sbjct: 268 LTAEEVKRYIRYIADRRLLQLGLNPLFHVDKNPLPWLDEMLNAVEHTNFFENRATEYSKA 327 Query: 120 A-ELKWD 125 + WD Sbjct: 328 STAGSWD 334 >gi|148234092|ref|NP_001079369.1| ribonucleotide reductase M2 B (TP53 inducible) [Xenopus laevis] gi|27371032|gb|AAH41209.1| MGC52676 protein [Xenopus laevis] Length = 386 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + K +++ ++ +A +E + E +P +G+N Sbjct: 261 RDEGLHCDFACLMFKHLIR-------KPSEERVVELITDAVQIEQEFLTEALPVNLIGMN 313 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G + +FK T NPF +M E I L+ + NFFE +V EYQ+ Sbjct: 314 CTLMKQYIEFVADRLLLELGFKKVFKAT-NPFDFM-ENISLEGKTNFFEKKVGEYQKMGV 371 Query: 122 LK 123 + Sbjct: 372 MS 373 >gi|118383611|ref|XP_001024960.1| ribonucleoside-diphosphate reductase, beta subunit family protein [Tetrahymena thermophila] gi|89306727|gb|EAS04715.1| ribonucleoside-diphosphate reductase, beta subunit family protein [Tetrahymena thermophila SB210] Length = 376 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + + K +++ ++ EA +E + E +P +G+N Sbjct: 251 RDEGLHTDFACLLYSMLNK-------KLTKEEIYEIITEAVEIEKEFISEALPVELIGMN 303 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +QY++F+A+R +G+ + ++NPF WM +I ++ + NFFE RV EYQ+ Sbjct: 304 SNMMKQYLEFVADRLLFALGVPKFYN-SKNPFEWMD-MISIQGKTNFFEKRVGEYQKANV 361 Query: 122 LK 123 + Sbjct: 362 MS 363 >gi|4894211|gb|AAD32302.1| ribonucleotide reductase small subunit [Glycine max] Length = 339 Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ + ++HEA +E + + +P +G+N Sbjct: 210 RDEGLHCDFACLLYSLLRK-------PLISDQVHKLVHEAVEIETEFVCDALPCALIGMN 262 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G + + ENPF WM E I L+ + NFFE RV +YQ+ + Sbjct: 263 SVLMSQYIKFVADRLLVALGYQRKYN-VENPFDWM-EFISLQGKANFFERRVGDYQKASV 320 Query: 122 LK 123 + Sbjct: 321 MS 322 >gi|258567064|ref|XP_002584276.1| ribonucleoside-diphosphate reductase small chain [Uncinocarpus reesii 1704] gi|237905722|gb|EEP80123.1| ribonucleoside-diphosphate reductase small chain [Uncinocarpus reesii 1704] Length = 401 Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + I+ + ++ EA +E + + +P +G+N Sbjct: 265 RDEGLHTDFACLLFSHIRH-------RPTPAAVEAIITEAVEIEKEFLTDALPCALLGMN 317 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G + + + NPF +M I L + NFFE RV +YQ+ Sbjct: 318 SKLMCQYIEFVADRLLVALGNKKFY-HATNPFDFMD-NISLAGKTNFFEKRVGDYQKAGV 375 Query: 122 L 122 + Sbjct: 376 M 376 >gi|149279601|ref|ZP_01885730.1| ribonucleoside-diphosphate reductase 1, beta subunit [Pedobacter sp. BAL39] gi|149229637|gb|EDM35027.1| ribonucleoside-diphosphate reductase 1, beta subunit [Pedobacter sp. BAL39] Length = 324 Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F + + +K K ++ ++ +A +E + + +P +G+N Sbjct: 197 RDEGSHCEFACLLYSMLK-------NKLSEEHVHGIIRDAVEIEKEFVTDALPVALIGMN 249 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R ++G ++ + NPF +M E+I L+ + NFFE RV +YQ+ Sbjct: 250 AKLMSQYIEFVADRWLQELGYTKIY-HATNPFDFM-EMISLQGKTNFFEKRVGDYQKSGV 307 Query: 122 LK 123 L Sbjct: 308 LT 309 >gi|118089009|ref|XP_001231545.1| PREDICTED: similar to small subunit ribonucleotide reductase isoform 1 [Gallus gallus] Length = 392 Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + K +++ + ++ A L+E + E +P +G+N Sbjct: 267 RDEGLHCDFACLMFKHLIR-------KPSEERVKEIIMNAVLIEQEFLTEALPVKLIGMN 319 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G ++K ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 320 CTLMKQYIEFVADRLMLELGFRKIYK-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 377 Query: 122 LK 123 + Sbjct: 378 MS 379 >gi|310798394|gb|EFQ33287.1| ribonucleotide reductase [Glomerella graminicola M1.001] Length = 413 Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +Q + ++ +A +E + E +P +G+N Sbjct: 275 RDEGLHTDFACLLYS-------HLKNRPSKQVIQDIIVDAVQIEQEFLTEALPCALLGMN 327 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +QY++F+A+R +G + ++K + NPF +M E I L + NFFE RV +YQ+ Sbjct: 328 SNLMKQYIEFVADRLLVALGNDKVYK-SSNPFDFM-ENISLGGKTNFFEKRVADYQKAGV 385 Query: 122 LK 123 + Sbjct: 386 MN 387 >gi|266919|sp|P29883|RIR2_VACCP RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|335710|gb|AAA48294.1| F14 [Vaccinia virus] Length = 319 Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305 Query: 122 LK 123 + Sbjct: 306 MS 307 >gi|56713400|gb|AAW23440.1| ribonucleoside-diphosphate reductase [Vaccinia virus] gi|56713684|gb|AAW23722.1| ribonucleoside-diphosphate reductase [Vaccinia virus] gi|88854075|gb|ABD52493.1| ribonucleoside-diphosphate reductase subunit [Vaccinia virus] gi|167412519|gb|ABZ79953.1| ribonucleotide reductase small subunit [Vaccinia virus GLV-1h68] Length = 319 Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305 Query: 122 LK 123 + Sbjct: 306 MS 307 >gi|119478853|ref|XP_001259462.1| ribonucleotide reductase small subunit RnrA, putative [Neosartorya fischeri NRRL 181] gi|119407616|gb|EAW17565.1| ribonucleotide reductase small subunit RnrA, putative [Neosartorya fischeri NRRL 181] Length = 405 Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ ++ EA +E + E +P +G+N Sbjct: 268 RDEGLHTDFACLLFS-------HLNHRPDKKVVEDIIVEAVAIEQEFLTEALPVALLGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G + + + NPF +M E I L + NFFE RV +YQ+ Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYYN-SSNPFDFM-ESISLAGKTNFFEKRVGDYQKAGV 378 Query: 122 L 122 + Sbjct: 379 M 379 >gi|20178418|ref|NP_619839.1| CPXV051 protein [Cowpox virus] gi|20153036|gb|AAM13497.1|AF482758_48 CPXV051 protein [Cowpox virus] Length = 333 Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 209 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 262 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 319 Query: 122 LK 123 + Sbjct: 320 MS 321 >gi|10432587|dbj|BAB13815.1| ribonucleotide reductase small subunit [Lentinula edodes] Length = 418 Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 9/120 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + ++ PH T ++ EA +E + + +P +G+N Sbjct: 287 RDEGMHTDFACLLFSHLR-RRPHPDT------VERIIKEAVAIEQEFLTDALPVSLIGMN 339 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G + L+ + NPF +M +I L+ + NFFE RV++Y + Sbjct: 340 ATLMCQYIEFVADRLLVALGNKKLYN-STNPFDFMD-MISLQGKTNFFEKRVSDYSKAGV 397 >gi|10344|emb|CAA26307.1| unnamed protein product [Spisula solidissima] Length = 300 Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL K Q++ ++ EA +E + E +P +G+N Sbjct: 172 RDEGLHCDFACLMFS-------HLVNKPSQERIHQIIDEAVKIEQVFLTEALPCRLIGMN 224 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R ++ + L+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 225 CDLMRQYIEFVADRLLLELKCDKLYN-KENPFDFM-EHISLEGKTNFFEKRVGEYQKMGV 282 Query: 122 LK 123 + Sbjct: 283 MS 284 >gi|70997335|ref|XP_753417.1| ribonucleotide reductase small subunit RnrA [Aspergillus fumigatus Af293] gi|66851053|gb|EAL91379.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus fumigatus Af293] gi|159126856|gb|EDP51972.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus fumigatus A1163] Length = 405 Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ ++ EA +E + + +P +G+N Sbjct: 268 RDEGLHTDFACLLFS-------HLNHRPDKKVIEDIIVEAVAIEQEFLTDALPVALLGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G + F + NPF +M E I L + NFFE RV +YQ+ Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYFN-SPNPFDFM-ESISLAGKTNFFEKRVGDYQKAGV 378 Query: 122 L 122 + Sbjct: 379 M 379 >gi|327269406|ref|XP_003219485.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like [Anolis carolinensis] Length = 414 Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ A +E + E +P G +G+N Sbjct: 289 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 341 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 342 CTLMKQYIEFVADRLLLELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 399 Query: 122 L 122 + Sbjct: 400 M 400 >gi|326797773|ref|YP_004315592.1| ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21] gi|326548537|gb|ADZ76922.1| Ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21] Length = 323 Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 67/120 (55%), Gaps = 9/120 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH F + + ++ + P +++ + ++ +A +E + + +P +G+N Sbjct: 198 RDEGLHCEFACLLYSMLEAKLP-------KERVQEIIIDAVEIEKEFITDALPVKLIGMN 250 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A +QY++F+A+R ++G + T NPF +M E+I L+ + NFFE RV +YQ+ Sbjct: 251 ADLMKQYIEFVADRWLVELGNSKYYNAT-NPFDFM-ELISLQGKTNFFEKRVGDYQKSGV 308 >gi|67515571|ref|XP_657671.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4] gi|40746089|gb|EAA65245.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4] gi|259489743|tpe|CBF90266.1| TPA: Ribonucleotide reductase [Source:UniProtKB/TrEMBL;Acc:Q9HEW8] [Aspergillus nidulans FGSC A4] Length = 406 Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ ++ EA +E + + +P +G+N Sbjct: 269 RDEGLHTDFACLLFS-------HLNWRPSKKVVEDIIVEAVAIEKEFLTDALPCALLGMN 321 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G + F T NPF +M E I L + NFFE RV +YQ+ Sbjct: 322 AKLMCQYIEFVADRLLVALGNKKYFNAT-NPFDFM-ESISLAGKTNFFEKRVGDYQKAGV 379 Query: 122 L 122 + Sbjct: 380 M 380 >gi|41054952|ref|NP_955770.1| ribonucleoside-diphosphate reductase subunit M2 B [Mus musculus] gi|81885688|sp|Q6PEE3|RIR2B_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B; AltName: Full=TP53-inducible ribonucleotide reductase M2 B; AltName: Full=p53-inducible ribonucleotide reductase small subunit 2-like protein; Short=p53R2 gi|34786000|gb|AAH58103.1| Ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus] gi|74218244|dbj|BAE23760.1| unnamed protein product [Mus musculus] Length = 351 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K + + R ++ +A +E + E +P G +G+N Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEDRVREIIADAVQIEQEFLTEALPVGLIGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 279 CVLMKQYIEFVADRLLGELGFSKIFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336 Query: 122 L 122 + Sbjct: 337 M 337 >gi|332876813|ref|ZP_08444570.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332685239|gb|EGJ58079.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 324 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 8/120 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++ R ++ +A +E + + +P +G+N Sbjct: 197 RDEGLHCDFACLLY------VNHLQNKLSEETIREIIVDAVAIEKEFVTDALPVKLIGMN 250 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G ++ T NPF +M E+I L+ + NFFE RV EYQ+ Sbjct: 251 AELMCQYIEFVADRLLVALGCNKVWNAT-NPFDFM-ELISLQGKTNFFERRVGEYQKTGV 308 >gi|42544136|ref|NP_056528.2| ribonucleoside-diphosphate reductase subunit M2 B isoform 1 [Homo sapiens] gi|114621161|ref|XP_001153916.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B isoform 2 [Pan troglodytes] gi|74727333|sp|Q7LG56|RIR2B_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B; AltName: Full=TP53-inducible ribonucleotide reductase M2 B; AltName: Full=p53-inducible ribonucleotide reductase small subunit 2-like protein; Short=p53R2 gi|261278726|pdb|3HF1|A Chain A, Crystal Structure Of Human P53r2 gi|261278727|pdb|3HF1|B Chain B, Crystal Structure Of Human P53r2 gi|7229086|dbj|BAA92434.1| ribonucleotide reductase [Homo sapiens] gi|7229115|dbj|BAA92493.1| ribonucleotide reductase [Homo sapiens] gi|45259569|dbj|BAD12267.1| p53-inducible ribonucleotide reductase small subunit 2 [Homo sapiens] gi|52545612|emb|CAB70703.2| hypothetical protein [Homo sapiens] gi|63055293|gb|AAY29059.1| ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens] gi|80473666|gb|AAI08262.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens] gi|109659128|gb|AAI17497.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens] gi|119612247|gb|EAW91841.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_b [Homo sapiens] gi|120660296|gb|AAI30629.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens] gi|190689549|gb|ACE86549.1| ribonucleotide reductase M2 B (TP53 inducible) protein [synthetic construct] gi|190690911|gb|ACE87230.1| ribonucleotide reductase M2 B (TP53 inducible) protein [synthetic construct] gi|261859014|dbj|BAI46029.1| ribonucleotide reductase M2 B [synthetic construct] gi|313882916|gb|ADR82944.1| ribonucleotide reductase M2 B (TP53 inducible) [synthetic construct] Length = 351 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 70/121 (57%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 279 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336 Query: 122 L 122 + Sbjct: 337 M 337 >gi|77748199|gb|AAI06683.1| MGC78958 protein [Xenopus laevis] Length = 406 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K +Q+ R ++ +A +E + E +P +G+N Sbjct: 281 RDEGLHTDFACLLFK-------HVVHKPSEQRVREIIIDAVKIEQEFLIEALPVELIGMN 333 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G + +FK +ENPF +M E I L+ + NFFE +V EYQ+ Sbjct: 334 CTLMKQYIEFVADRLLLELGFKKIFK-SENPFDFM-ENISLEGKTNFFEKKVGEYQKMGV 391 Query: 122 L 122 + Sbjct: 392 M 392 >gi|71648907|ref|XP_813233.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma cruzi strain CL Brener] gi|70878098|gb|EAN91382.1| ribonucleoside-diphosphate reductase small chain, putative [Trypanosoma cruzi] Length = 337 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++ K +++ R ++ A +E + + +P +G+N Sbjct: 210 RDEGLHTDFACLLY------ENYIVNKLPKERIREIICSAVDIEREFICDAIPVRLLGMN 263 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A Y++F+A+R +G E + ++NPF +M E+I L+ + NFFE +V EYQ+ Sbjct: 264 ADLMSTYIEFVADRLLVALGNERHYN-SKNPFDFM-EMISLQGKTNFFEKKVGEYQKAGV 321 Query: 122 LK 123 + Sbjct: 322 MS 323 >gi|322693757|gb|EFY85606.1| ribonucleoside-diphosphate reductase M2 subunit [Metarhizium acridum CQMa 102] Length = 411 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +Q ++ +A +E + E +P +G+N Sbjct: 273 RDEGLHTDFACLL-------HSHLKNRASKQIIHDIITDAVAIEKEFLTEALPCALLGMN 325 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +QY++F+A+R +G E ++K T NPF +M E I L + NFFE RV +YQ+ Sbjct: 326 SNLMKQYIEFVADRLLVALGNEKVYK-TSNPFDFM-ENISLGGKTNFFEKRVGDYQKAGV 383 Query: 122 L 122 L Sbjct: 384 L 384 >gi|38229183|ref|NP_938276.1| 20L [Yaba monkey tumor virus] gi|38000454|gb|AAR07377.1| 20L [Yaba monkey tumor virus] Length = 325 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL + R ++ EA +E + E MP +G+N Sbjct: 200 RDEGLHCDFACMMFK-------HLSNPPLENVIRDIVIEAVDIEKNFLTEAMPVKLIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G + + ++NPF +M E I L+ + NFFE RV+EYQ+ + Sbjct: 253 CDLMKQYIEFVADRLLLELGCKK-YYCSKNPFDFM-ENISLEGKTNFFEKRVSEYQKMSV 310 Query: 122 LK 123 + Sbjct: 311 MS 312 >gi|329113329|ref|ZP_08242110.1| Ribonucleoside-diphosphate reductase subunit beta [Acetobacter pomorum DM001] gi|326697154|gb|EGE48814.1| Ribonucleoside-diphosphate reductase subunit beta [Acetobacter pomorum DM001] Length = 339 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH I + ENP LWT++ + + + E A+ G G Sbjct: 204 VRDETLHCLSIIRLFRVFIQENPELWTEQLRTELTDICRTIVEHEEAFIDLAFEMGAVEG 263 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 LNA + Y+ FIA+RR Q+GLEP++ T NP PW+ ++++ + NFFE R TEY + Sbjct: 264 LNAEQVKTYIHFIADRRLTQLGLEPIYNTTTNPLPWLDDMLNAVEHTNFFENRSTEYSRA 323 Query: 120 A-ELKWD 125 + W+ Sbjct: 324 STAGTWE 330 >gi|90660281|gb|ABD97395.1| ribonucleotide reductase small subunit [Cowpox virus] Length = 333 Score = 159 bits (404), Expect = 8e-38, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 209 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 262 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 319 Query: 122 LK 123 + Sbjct: 320 MS 321 >gi|331245491|ref|XP_003335382.1| ribonucleoside-diphosphate reductase subunit M2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309314372|gb|EFP90963.1| ribonucleoside-diphosphate reductase subunit M2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 380 Score = 159 bits (404), Expect = 8e-38, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + PH T + ++ +A +E + + +P +G+N Sbjct: 243 RDEGLHTDFACLLFTHL-ERRPHPDT------VQAIIAQAVEIEKEFLSDALPCKLIGMN 295 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G E + T NPF +M E+I L + NFFE RV++Y + Sbjct: 296 ADLMCQYIEFVADRLLVALGNEKFYNAT-NPFDFM-EMISLSGKTNFFEKRVSDYAKAGV 353 Query: 122 LK 123 + Sbjct: 354 MT 355 >gi|302665732|ref|XP_003024474.1| hypothetical protein TRV_01368 [Trichophyton verrucosum HKI 0517] gi|291188529|gb|EFE43863.1| hypothetical protein TRV_01368 [Trichophyton verrucosum HKI 0517] Length = 529 Score = 159 bits (404), Expect = 8e-38, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ EA +E + + +P +G+N Sbjct: 393 RDEGLHTDFACLLFS-------HLNYRPDPSAVEAIITEAVTIEQEFLTDALPCALLGMN 445 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G + + T NPF +M I L + NFFE RV +YQ+ Sbjct: 446 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMD-NISLAGKTNFFEKRVGDYQKAGV 503 Query: 122 L 122 + Sbjct: 504 M 504 >gi|171687074|ref|XP_001908478.1| hypothetical protein [Podospora anserina S mat+] gi|170943498|emb|CAP69151.1| unnamed protein product [Podospora anserina S mat+] Length = 409 Score = 159 bits (404), Expect = 8e-38, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +Q ++ +A +E + E +P +G+N Sbjct: 271 RDEGLHTDFACLLFS-------HLNNRPSKQLVEDIIRDAVTIEQEFLTEALPCALLGMN 323 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +QY++F+A+R +G + +++ + NPF +M E I L + NFFE RV EYQ+ Sbjct: 324 SNLMKQYIEFVADRLLVALGNDKIYR-STNPFDFM-ENISLGGKTNFFEKRVGEYQKAGV 381 Query: 122 LK 123 + Sbjct: 382 MN 383 >gi|56404698|sp|O57175|RIR2_VACCA RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|2772676|gb|AAB96415.1| ribonucleotide reductase, small subunit [Vaccinia virus] gi|47088360|gb|AAT10430.1| ribonucleotide reductase small subunit [Vaccinia virus] gi|160857924|emb|CAM58212.1| ribonucleotide reductase small subunit [Vaccinia virus Ankara] Length = 319 Score = 159 bits (404), Expect = 9e-38, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305 Query: 122 LK 123 + Sbjct: 306 MS 307 >gi|167519412|ref|XP_001744046.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778008|gb|EDQ91624.1| predicted protein [Monosiga brevicollis MX1] Length = 329 Score = 159 bits (404), Expect = 9e-38, Method: Composition-based stats. Identities = 37/123 (30%), Positives = 68/123 (55%), Gaps = 9/123 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +K + +++ ++ +A +E + +P G +G+N Sbjct: 204 RDEGLHTDFACLMFSMLKK-------RPSKERVTGIIMDAVEIEQDFLTNALPCGLLGMN 256 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A +QY++F+++R +G E +F +ENPF +M E I ++ + NFFE RV EYQ+ Sbjct: 257 ATLMKQYIEFVSDRLLVALGCEKIFN-SENPFDFM-ESISIEGKTNFFEKRVGEYQKAGV 314 Query: 122 LKW 124 + Sbjct: 315 MAD 317 >gi|66275840|ref|YP_232925.1| ribonucleotide reductase small subunit [Vaccinia virus] gi|132629|sp|P11158|RIR2_VACCV RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|335624|gb|AAA48244.1| F4L protein [Vaccinia virus] gi|335809|gb|AAA88680.1| ribonucleotide reductase (EC 1.17.4.1) small subunit [Vaccinia virus] gi|29692149|gb|AAO89322.1| ribonucleotide reductase small subunit [Vaccinia virus WR] Length = 319 Score = 159 bits (404), Expect = 9e-38, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305 Query: 122 LK 123 + Sbjct: 306 MS 307 >gi|302833193|ref|XP_002948160.1| hypothetical protein VOLCADRAFT_101784 [Volvox carteri f. nagariensis] gi|300266380|gb|EFJ50567.1| hypothetical protein VOLCADRAFT_101784 [Volvox carteri f. nagariensis] Length = 354 Score = 159 bits (404), Expect = 9e-38, Method: Composition-based stats. Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 9/124 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL + +++ ++ EA LE + E + +G+N Sbjct: 219 RDEGLHCDFACCLY-------GHLKNRLSRERVVKIVDEAVRLEDEFCTEALSCELLGMN 271 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G + + NPF WM E+I L+ + NFFE RV EYQ+ Sbjct: 272 ADLMRQYIRFVADRLLVSLGYDKYYNTV-NPFDWM-EMISLQGKANFFERRVGEYQRACV 329 Query: 122 LKWD 125 + D Sbjct: 330 MAGD 333 >gi|197101489|ref|NP_001125944.1| ribonucleoside-diphosphate reductase subunit M2 B [Pongo abelii] gi|75041724|sp|Q5R9G0|RIR2B_PONAB RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B gi|55729743|emb|CAH91600.1| hypothetical protein [Pongo abelii] Length = 351 Score = 159 bits (404), Expect = 9e-38, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 279 CILMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336 Query: 122 L 122 + Sbjct: 337 M 337 >gi|298707394|emb|CBJ30029.1| conserved unknown protein [Ectocarpus siliculosus] Length = 380 Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 9/120 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++ + P ++ ++ +A +E + +P +G+N Sbjct: 255 RDEGLHTDFACLLFRKLVNKLP-------VERVAEIICDAVDIEKEFITSALPVELIGMN 307 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F A+R ++G E + + NPF WM E+I L+ + NFFE RV EY + Sbjct: 308 SALMRQYIEFCADRLLMELGCEKKYN-STNPFDWM-EMISLQGKTNFFEKRVGEYSKSGV 365 >gi|71043760|ref|NP_001020911.1| ribonucleoside-diphosphate reductase subunit M2 [Rattus norvegicus] gi|77416595|sp|Q4KLN6|RIR2_RAT RecName: Full=Ribonucleoside-diphosphate reductase subunit M2; AltName: Full=Ribonucleotide reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|68533806|gb|AAH99082.1| Ribonucleotide reductase M2 [Rattus norvegicus] gi|149051013|gb|EDM03186.1| rCG61374 [Rattus norvegicus] Length = 390 Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ + ++ + +E + E +P +G+N Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIITNSVRIEQEFLTEALPVKLIGMN 317 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +FK ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIFK-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 375 Query: 122 LK 123 + Sbjct: 376 MS 377 >gi|194673004|ref|XP_607398.4| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos taurus] gi|297482473|ref|XP_002692807.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like [Bos taurus] gi|296480530|gb|DAA22645.1| ribonucleotide reductase M2 polypeptide-like [Bos taurus] Length = 351 Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ A +E + E +P G +G+N Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 279 CVLMKQYIEFVADRLLTELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336 Query: 122 L 122 + Sbjct: 337 M 337 >gi|124010268|ref|ZP_01694921.1| ribonucleoside-diphosphate reductase, beta subunit [Microscilla marina ATCC 23134] gi|123983653|gb|EAY24093.1| ribonucleoside-diphosphate reductase, beta subunit [Microscilla marina ATCC 23134] Length = 330 Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 8/120 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N K + +++ A +E + + +P +G+N Sbjct: 200 RDEGLHCDFACLLYNSYIK------NKLPNETVVSIIKNAVEIEKEFVTDALPVKLIGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +Y++F+A+R ++G E + T NPF +M E+I L+ + NFFE RV+EY + Sbjct: 254 SDLMSEYIEFVADRLLVELGCEKQYN-TANPFDFM-EMISLEGKTNFFEKRVSEYSKAGV 311 >gi|330994651|ref|ZP_08318574.1| putative ribonucleoside-diphosphate reductase small subunit [Gluconacetobacter sp. SXCC-1] gi|329758292|gb|EGG74813.1| putative ribonucleoside-diphosphate reductase small subunit [Gluconacetobacter sp. SXCC-1] Length = 365 Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDESLH + + ENP +WT + R + + E A+ + G G Sbjct: 234 VRDESLHCDSMARLFRVFVQENPEIWTDTLRDDIRQICRDIVEHEDAFIDLSFEMGAVEG 293 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L+A ++Y++F+ANRR Q+GL+ ++ NP PW+ E+++ + NFFE R TEY + Sbjct: 294 LDAGQVKRYIRFVANRRLGQLGLDGIYDIATNPLPWVDEMVNAVEHANFFENRATEYSRA 353 Query: 120 A-ELKWD 125 + WD Sbjct: 354 STTGTWD 360 >gi|150863757|ref|XP_001382334.2| small subunit of ribonucleotide reductase [Scheffersomyces stipitis CBS 6054] gi|149385013|gb|ABN64305.2| small subunit of ribonucleotide reductase [Scheffersomyces stipitis CBS 6054] Length = 417 Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + + ++ EA +E + + +P +G+N Sbjct: 286 RDEGLHTDFACLLFS-------HLQNRPDAEIVEKIITEAVKIEKEFFTDALPSSLLGMN 338 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G + ++ T NPF +M E I L + NFFE RV++YQ+ Sbjct: 339 AELMCQYVEFVADRLLVALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 396 Query: 122 L 122 + Sbjct: 397 M 397 >gi|311748425|ref|ZP_07722210.1| ribonucleoside-diphosphate reductase, beta subunit [Algoriphagus sp. PR1] gi|126576938|gb|EAZ81186.1| ribonucleoside-diphosphate reductase, beta subunit [Algoriphagus sp. PR1] Length = 326 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 66/122 (54%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + H+ ++ R ++ +A +E + + +P +G+N Sbjct: 196 RDEGLHCDFACHLYTK------HVVNPLPKETVREIIIDAVKIEKEFVTDALPVRLIGMN 249 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R ++ E ++ + NPF +M +I L+ + NFFE RV +YQ+ Sbjct: 250 SDLMCQYIEFVADRLLLELDCEKVWN-STNPFDFMD-MISLQGKTNFFEKRVGDYQKAGV 307 Query: 122 LK 123 +K Sbjct: 308 MK 309 >gi|39977011|ref|XP_369893.1| hypothetical protein MGG_06408 [Magnaporthe oryzae 70-15] gi|145016179|gb|EDK00669.1| hypothetical protein MGG_06408 [Magnaporthe oryzae 70-15] Length = 403 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + L + ++ + ++ +A +E + E +P +G+N Sbjct: 260 RDEGLHTDFACLLFSL-------LNNRPNKEVVKEIVVDAVKIEQEFLTEALPCALLGMN 312 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A +QY++F+A+R +G E +++ T NPF +M E I L + NFFE RV EYQ+ Sbjct: 313 ANLMKQYIEFVADRLLVALGNEKVYRAT-NPFDFM-ENISLGGKTNFFEKRVGEYQKAGV 370 Query: 122 L 122 + Sbjct: 371 M 371 >gi|158286793|ref|XP_308927.4| AGAP006818-PA [Anopheles gambiae str. PEST] gi|157020637|gb|EAA04227.4| AGAP006818-PA [Anopheles gambiae str. PEST] Length = 400 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ ++ +A L+E + + +P +G+N Sbjct: 275 RDEGLHCDFACLMFK-------YLVQKPSKERVTEIIRDAVLIEQEFLTKALPVDMLGMN 327 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R ++G E ++ +T+NPF +M E I L+ + NFFE +V EYQ+ Sbjct: 328 CDLMSQYIEFVADRLLLELGCEKIY-HTKNPFSFM-EFISLEGKTNFFEKKVGEYQKWGV 385 Query: 122 L 122 + Sbjct: 386 M 386 >gi|145553335|ref|XP_001462342.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124430181|emb|CAK94969.1| unnamed protein product [Paramecium tetraurelia] Length = 355 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K Q+ ++ A +E + E +P +G+N Sbjct: 230 RDEGLHTDFACLLYK-------HLVNKMSNQRIHEIISSAVEIEKEFISEALPVELIGMN 282 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +QY++F+A+R +G ++ ++NPF WM +I L+ + NFFE RV +YQ+ Sbjct: 283 SNLMKQYIEFVADRLIFALGAPKIYN-SKNPFEWMD-MISLQGKTNFFERRVGDYQKAGV 340 Query: 122 LK 123 + Sbjct: 341 MS 342 >gi|224048725|ref|XP_002196356.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Taeniopygia guttata] Length = 390 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ + ++ A L+E + E +P +G+N Sbjct: 265 RDEGLHCDFACLMFK-------HLIHKPSEERVKEIIMNAVLIEQEFLTEALPVKLIGMN 317 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G ++K ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 375 Query: 122 LK 123 + Sbjct: 376 MS 377 >gi|224046583|ref|XP_002198998.1| PREDICTED: hypothetical protein [Taeniopygia guttata] Length = 362 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 39/121 (32%), Positives = 68/121 (56%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +L + +++ ++ A +E + E +P G +G+N Sbjct: 237 RDEGLHCDFACLMFH-------YLVNRPSEERVCEIIVNAVEIEQEFLTEALPVGLIGMN 289 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 290 CTLMKQYIEFVADRLLMELGFSKVFN-VENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 347 Query: 122 L 122 + Sbjct: 348 M 348 >gi|91081999|ref|XP_969259.1| PREDICTED: similar to AGAP006818-PA [Tribolium castaneum] gi|270007377|gb|EFA03825.1| hypothetical protein TcasGA2_TC013940 [Tribolium castaneum] Length = 374 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 68/120 (56%), Gaps = 9/120 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL K +++ ++++ +A +E + E +P +G+N Sbjct: 250 RDEGLHCDFACLMFS-------HLVQKPSKERIQSIIQDAVKIEKEFLTEALPVSMIGMN 302 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R ++G E ++ ++NPF +M+ +I + + NFFE +V EYQ+ Sbjct: 303 CALMCQYIEFVADRLLGELGCEKIYN-SQNPFDFMT-IISNEGKTNFFEKKVGEYQKSGV 360 >gi|261189551|ref|XP_002621186.1| ribonucleotide reductase small subunit RnrA [Ajellomyces dermatitidis SLH14081] gi|239591422|gb|EEQ74003.1| ribonucleotide reductase small subunit RnrA [Ajellomyces dermatitidis SLH14081] gi|239613047|gb|EEQ90034.1| ribonucleotide reductase small subunit RnrA [Ajellomyces dermatitidis ER-3] gi|327356917|gb|EGE85774.1| ribonucleotide reductase M2 B [Ajellomyces dermatitidis ATCC 18188] Length = 413 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + + ++ EA +E + + +P +G+N Sbjct: 274 RDEGLHTDFACLLFS-------HLRHRPSPEAVERIITEAVTIEQEFLSDALPVALLGMN 326 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G + ++ + NPF +M I L + NFFE RV +YQ+ Sbjct: 327 AKLMCQYIEFVADRLLVALGNKKVYN-STNPFDFMD-NISLAGKTNFFEKRVGDYQKAGV 384 Query: 122 L 122 + Sbjct: 385 M 385 >gi|261335316|emb|CBH18310.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma brucei gambiense DAL972] Length = 337 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++ K + + ++ A +E + + +P +G+N Sbjct: 210 RDEGLHTDFACLLY------EKYIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G + + ++NPF +M +I L+ + NFFE +V EYQ+ Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFMD-MISLQGKTNFFEKKVGEYQKAGV 321 Query: 122 LK 123 + Sbjct: 322 MS 323 >gi|289177076|ref|NP_001165949.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 3 [Homo sapiens] gi|55631160|ref|XP_528204.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B isoform 3 [Pan troglodytes] gi|42794058|dbj|BAD11774.1| p53-inducible ribonucleotide reductase small subunit 2 long form [Homo sapiens] gi|119612246|gb|EAW91840.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_a [Homo sapiens] Length = 299 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N Sbjct: 174 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 226 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 227 CILMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 284 Query: 122 L 122 + Sbjct: 285 M 285 >gi|157869457|ref|XP_001683280.1| ribonucleoside-diphosphate reductase small chain [Leishmania major strain Friedlin] gi|68224164|emb|CAJ04657.1| putative ribonucleoside-diphosphate reductase small chain [Leishmania major strain Friedlin] Length = 392 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N Sbjct: 265 RDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G E + T+ PF +M E+I L+ + NFFE +V EYQ+ Sbjct: 319 AELMAQYIEFVADRLLVSLGEEKHYHSTQ-PFEFM-EMISLQGKTNFFERKVGEYQKAGV 376 Query: 122 LK 123 + Sbjct: 377 MS 378 >gi|323450429|gb|EGB06310.1| hypothetical protein AURANDRAFT_65685 [Aureococcus anophagefferens] Length = 349 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 9/120 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + ++++ + P + ++ +A +E + +P +G+N Sbjct: 224 RDEGMHCDFACLLYSKLRNKLP-------VETINALIGDAVTIEKEFVVSALPVELIGMN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + + QY++F A+R +G L++ T NPF WM E+I L+ + NFFE RV EY + Sbjct: 277 SRTMCQYIEFCADRLLLALGCPKLYEAT-NPFDWM-ELISLQGKTNFFEKRVGEYAKSGV 334 >gi|260950985|ref|XP_002619789.1| hypothetical protein CLUG_00948 [Clavispora lusitaniae ATCC 42720] gi|238847361|gb|EEQ36825.1| hypothetical protein CLUG_00948 [Clavispora lusitaniae ATCC 42720] Length = 419 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ EA +E Y + +P +G+N Sbjct: 289 RDEGLHTDFACLLFS-------HLNNRPNPAIVEKIITEAVTIEKEYFTDALPASLLGMN 341 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G + ++ T NPF +M E I L + NFFE RV++YQ+ Sbjct: 342 CDLMCQYVEFVADRLLVALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 399 Query: 122 L 122 + Sbjct: 400 M 400 >gi|291388369|ref|XP_002710634.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like [Oryctolagus cuniculus] Length = 339 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ A +E + E +P G +G+N Sbjct: 214 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 266 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 267 CILMKQYIEFVADRLLMELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 324 Query: 122 L 122 + Sbjct: 325 M 325 >gi|156058956|ref|XP_001595401.1| hypothetical protein SS1G_03490 [Sclerotinia sclerotiorum 1980] gi|154701277|gb|EDO01016.1| hypothetical protein SS1G_03490 [Sclerotinia sclerotiorum 1980 UF-70] Length = 407 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 66/121 (54%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +K + +Q + ++ EA +E + E +P +G+N Sbjct: 266 RDEGLHTDFACLLFSHLKH-------RPSKQAVQDVITEAVEIEQEFLTEALPCALLGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +QY++F+A+R +G + ++K NPF +M E I L + NFFE RV +YQ+ Sbjct: 319 STLMKQYIEFVADRLLVTLGNDKVYKSA-NPFDFM-ENISLAGKTNFFEKRVGDYQKAGV 376 Query: 122 L 122 + Sbjct: 377 M 377 >gi|126322530|ref|XP_001380256.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 361 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 72/121 (59%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +L K +++ + ++ A +E + + +P G +G+N Sbjct: 236 RDEGLHCDFACLMFH-------YLVNKPSEERVKEIIINAVEIEQEFLTDALPVGLIGIN 288 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +QY++F+A+R ++G +F+ ++NPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 289 STLMKQYIEFVADRLLVELGFSKVFQ-SDNPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 346 Query: 122 L 122 + Sbjct: 347 M 347 >gi|118089007|ref|XP_419948.2| PREDICTED: similar to small subunit ribonucleotide reductase isoform 2 [Gallus gallus] Length = 384 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + K +++ + ++ A L+E + E +P +G+N Sbjct: 259 RDEGLHCDFACLMFKHLIR-------KPSEERVKEIIMNAVLIEQEFLTEALPVKLIGMN 311 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G ++K ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 312 CTLMKQYIEFVADRLMLELGFRKIYK-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 369 Query: 122 LK 123 + Sbjct: 370 MS 371 >gi|2465173|emb|CAA71741.1| ribonucleotide reductase (Class I) [Trypanosoma brucei brucei] Length = 337 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++ K + + ++ A +E + + +P +G+N Sbjct: 210 RDEGLHTDFACLLY------EKYIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G + + ++NPF +M +I L+ + NFFE +V EYQ+ Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFMD-MISLQGKTNFFEKKVGEYQKAGV 321 Query: 122 LK 123 + Sbjct: 322 MS 323 >gi|194036959|ref|XP_001925036.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Sus scrofa] Length = 351 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K + + R ++ A +E + E +P G +G+N Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEARVREIIVNAVEIEQEFLTEALPVGLIGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 279 CVLMKQYIEFVADRLLTELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336 Query: 122 L 122 + Sbjct: 337 M 337 >gi|148676854|gb|EDL08801.1| ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus] Length = 297 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K + + R ++ +A +E + E +P G +G+N Sbjct: 172 RDEGLHCDFACLMFQ-------YLVNKPSEDRVREIIADAVQIEQEFLTEALPVGLIGMN 224 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 225 CVLMKQYIEFVADRLLGELGFSKIF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 282 Query: 122 L 122 + Sbjct: 283 M 283 >gi|12085003|ref|NP_073405.1| 20L protein [Yaba-like disease virus] gi|56404692|sp|Q9DHU2|RIR2_YLDV RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|12056179|emb|CAC21258.1| 20L protein [Yaba-like disease virus] Length = 325 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL R ++ EA +E + E +P +G+N Sbjct: 200 RDEGLHCDFACIMFK-------HLLNPPLNSVVRDIIIEAVNIEKNFLTEAIPVKLIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G + + ++NPF +M E I L+ + NFFE RV+EYQ+ + Sbjct: 253 CDLMKQYIEFVADRLLLELGCDK-YYCSKNPFDFM-ENISLEGKTNFFEKRVSEYQKMSV 310 Query: 122 LK 123 + Sbjct: 311 MS 312 >gi|44971395|gb|AAS49745.1| RPXV032 [Rabbitpox virus] Length = 319 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305 Query: 122 LK 123 + Sbjct: 306 MS 307 >gi|114621164|ref|XP_001153859.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes] gi|332214017|ref|XP_003256123.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like [Nomascus leucogenys] gi|332830969|ref|XP_003311933.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Pan troglodytes] gi|119612248|gb|EAW91842.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_c [Homo sapiens] gi|194385642|dbj|BAG65196.1| unnamed protein product [Homo sapiens] Length = 297 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N Sbjct: 172 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 224 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 225 CILMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 282 Query: 122 L 122 + Sbjct: 283 M 283 >gi|22164633|ref|NP_671546.1| EVM028 [Ectromelia virus] gi|22123774|gb|AAM92332.1|AF523264_28 EVM028 [Ectromelia virus] Length = 319 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y++FIA+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFIADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305 Query: 122 LK 123 + Sbjct: 306 MS 307 >gi|3914640|sp|O15910|RIR2_TRYBB RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase R2 subunit; AltName: Full=Ribonucleotide reductase small subunit gi|2411479|gb|AAB70705.1| ribonucleotide reductase small subunit [Trypanosoma brucei] gi|261335314|emb|CBH18308.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma brucei gambiense DAL972] Length = 337 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++ K + + ++ A +E + + +P +G+N Sbjct: 210 RDEGLHTDFACLLY------EKYIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G + + ++NPF +M +I L+ + NFFE +V EYQ+ Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFMD-MISLQGKTNFFEKKVGEYQKAGV 321 Query: 122 LK 123 + Sbjct: 322 MS 323 >gi|256421019|ref|YP_003121672.1| ribonucleoside-diphosphate reductase [Chitinophaga pinensis DSM 2588] gi|256035927|gb|ACU59471.1| Ribonucleoside-diphosphate reductase [Chitinophaga pinensis DSM 2588] Length = 323 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH F + ++ P ++ T++ +A +E + + +P +G+N Sbjct: 198 RDEGLHCEFACLLYGMLENRLPE-------EQVHTIIRDAVAIEKEFITDALPVALIGMN 250 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +Y++F+A+R ++G +F T NPF +M E+I L+ + NFFE RV +YQ+ Sbjct: 251 SKLMSEYIEFVADRWLSELGYTKIFN-TANPFDFM-EMISLQGKTNFFEKRVGDYQKAGV 308 Query: 122 LK 123 + Sbjct: 309 MS 310 >gi|255037048|ref|YP_003087669.1| Ribonucleoside-diphosphate reductase [Dyadobacter fermentans DSM 18053] gi|254949804|gb|ACT94504.1| Ribonucleoside-diphosphate reductase [Dyadobacter fermentans DSM 18053] Length = 331 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH F + + H+ + Q++ ++ +A +E + E +P +G+N Sbjct: 201 RDEGLHCEFACLLYTK------HILNQLPQERVIEIMLDAVEIEKEFVSEALPVSLIGMN 254 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A +QY+++IA+ ++G F NPF +M E+I L + NFFE RV EYQ+ Sbjct: 255 ADLMKQYIEYIADFWLERLGCPKQFGSA-NPFDFM-ELISLPGKTNFFEKRVGEYQKAGV 312 Query: 122 LK 123 + Sbjct: 313 MS 314 >gi|50949848|emb|CAH10473.1| hypothetical protein [Homo sapiens] Length = 297 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N Sbjct: 172 RDEGLHCDFACLMFQ-------YLVNKPPEERVREIIVDAVKIEQEFLTEALPVGLIGMN 224 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 225 CILMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 282 Query: 122 L 122 + Sbjct: 283 M 283 >gi|74025550|ref|XP_829341.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma brucei] gi|70834727|gb|EAN80229.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma brucei] gi|261335315|emb|CBH18309.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma brucei gambiense DAL972] Length = 337 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++ K + + ++ A +E + + +P +G+N Sbjct: 210 RDEGLHTDFACLLY------EKYIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G + + ++NPF +M +I L+ + NFFE +V EYQ+ Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFMD-MISLQGKTNFFEKKVGEYQKAGV 321 Query: 122 LK 123 + Sbjct: 322 MS 323 >gi|190896512|gb|ACE96769.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896530|gb|ACE96778.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFFEKRVGEY 223 >gi|301117384|ref|XP_002906420.1| ribonucleoside-diphosphate reductase small chain [Phytophthora infestans T30-4] gi|262107769|gb|EEY65821.1| ribonucleoside-diphosphate reductase small chain [Phytophthora infestans T30-4] Length = 379 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 34/120 (28%), Positives = 67/120 (55%), Gaps = 9/120 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + ++ L TK + + ++ +A +E + +++P +G+N Sbjct: 254 RDEGMHTDFACLLYSK-------LVTKLPESRVHEIVRDAVTIEHEFVRDSLPVELIGMN 306 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R + +G+ ++ + +NPF WM +I L+ + NFFE RV EY + Sbjct: 307 SGLMCQYIEFVADRLLYSLGVSKIY-HAKNPFDWMD-MISLQGKTNFFEKRVGEYSKAGV 364 >gi|294945135|ref|XP_002784568.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus ATCC 50983] gi|239897674|gb|EER16364.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus ATCC 50983] Length = 238 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 8/121 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N + +T+ ++ ++ A +E + E++P +G+N Sbjct: 96 RDEGLHADFACLLYNMMH------YTRLPDERVHEIVRGAVDVERVFISESLPVSLIGMN 149 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +Y++F+A+R +G L+ T NPF WM +I L+ + NFFE RV EYQ+G Sbjct: 150 SQLMCRYIEFVADRLLVALGHPKLYNAT-NPFDWMK-MISLQGKTNFFEKRVGEYQKGGV 207 Query: 122 L 122 + Sbjct: 208 M 208 >gi|255079598|ref|XP_002503379.1| predicted protein [Micromonas sp. RCC299] gi|226518645|gb|ACO64637.1| predicted protein [Micromonas sp. RCC299] Length = 335 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + I K + R ++ EA +E + + +P VG+N Sbjct: 208 RDEGLHRDFACLLYSYINK-------KPNESVVRQIVKEAVEIEKEFVCDALPCALVGMN 260 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A +Y++F+A+ Q+G+ + NPF WM E+I L+ + NFFE RV EYQ+ Sbjct: 261 ADLMSEYIEFVADHLLGQLGMSKEYNAA-NPFDWM-ELISLQGKTNFFEKRVGEYQKSGV 318 Query: 122 LK 123 + Sbjct: 319 MN 320 >gi|315041979|ref|XP_003170366.1| ribonucleoside-diphosphate reductase small subunit [Arthroderma gypseum CBS 118893] gi|311345400|gb|EFR04603.1| ribonucleoside-diphosphate reductase small subunit [Arthroderma gypseum CBS 118893] Length = 408 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ EA +E + + +P +G+N Sbjct: 272 RDEGLHTDFACLLFS-------HLNHRPEPSAVEAIITEAVTIEQEFLTDALPCALLGMN 324 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G + + T NPF +M I L + NFFE RV +YQ+ Sbjct: 325 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMD-NISLAGKTNFFEKRVGDYQKAGV 382 Query: 122 L 122 + Sbjct: 383 M 383 >gi|74025554|ref|XP_829343.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma brucei] gi|70834729|gb|EAN80231.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma brucei] Length = 337 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++ K + + ++ A +E + + +P +G+N Sbjct: 210 RDEGLHTDFACLLY------EKYIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G + + ++NPF +M +I L+ + NFFE +V EYQ+ Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFMD-MISLQGKTNFFEKKVGEYQKAGV 321 Query: 122 LK 123 + Sbjct: 322 MS 323 >gi|294950175|ref|XP_002786498.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus ATCC 50983] gi|239900790|gb|EER18294.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus ATCC 50983] Length = 350 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 39/121 (32%), Positives = 67/121 (55%), Gaps = 8/121 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N +K +T+ ++ ++ A +E + E++P +G+N Sbjct: 208 RDEGLHADFACLLYNMLK------YTRLPDERVHEIVRGAVEVERVFISESLPVSLIGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +Y++F+A+R +G L+ T NPF WM +I L+ + NFFE RV EYQ+G Sbjct: 262 SQLMCRYIEFVADRLLVALGHPKLYNAT-NPFDWMK-MISLQGKTNFFEKRVGEYQKGGV 319 Query: 122 L 122 + Sbjct: 320 M 320 >gi|11878241|gb|AAG40862.1| ribonucleotide reductase [Emericella nidulans] Length = 406 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ ++ EA +E + + +P +G+N Sbjct: 269 RDEGLHTDFACLLFS-------HLNWRPSKKVVEDIIVEAVAIEKEFLTDALPCALLGMN 321 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G + F T NPF +M E I L + NFFE RV +YQ+ Sbjct: 322 AKLMCQYIEFVADRLLVALGNKEYFNAT-NPFDFM-ESISLAGKTNFFEKRVGDYQKAGV 379 Query: 122 L 122 + Sbjct: 380 M 380 >gi|50545856|ref|XP_500466.1| YALI0B03630p [Yarrowia lipolytica] gi|49646332|emb|CAG82692.1| YALI0B03630p [Yarrowia lipolytica] Length = 403 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ ++ EA +E + + +P G +G+N Sbjct: 272 RDEGLHTDFACLLFS-------HLENRPSKKIVEDVIVEAVGIEQEFLTDALPCGLLGMN 324 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G ++ + NPF +M E I L + NFFE RV++YQ+ Sbjct: 325 AKLMCQYIEFVADRLLVALGNSKVYN-STNPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 382 Query: 122 L 122 + Sbjct: 383 M 383 >gi|111184227|gb|ABH08147.1| HSPV044 [Horsepox virus] Length = 319 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305 Query: 122 LK 123 + Sbjct: 306 MS 307 >gi|324519017|gb|ADY47264.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum] Length = 376 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 9/124 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +K K +++ ++ EA +E Y E +P G +G+N Sbjct: 251 RDEGLHRDFACLMFSHLKK-------KPNKERIYEIIREAVKIEQEYLTEALPVGLIGMN 303 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++++A+ ++ L+ ENPF +M+ I ++ + NFFE RV+EYQ+ Sbjct: 304 CELMSQYIEYVADHLLTELKCPKLYNM-ENPFDFMAR-ISIEAKTNFFEKRVSEYQKAGV 361 Query: 122 LKWD 125 L D Sbjct: 362 LSTD 365 >gi|27769295|gb|AAH42468.1| Similar to ribonucleotide reductase M2 polypeptide [Homo sapiens] Length = 285 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N Sbjct: 160 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 212 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 213 CILMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 270 Query: 122 L 122 + Sbjct: 271 M 271 >gi|149721713|ref|XP_001493623.1| PREDICTED: ribonucleotide reductase M2 B (TP53 inducible) [Equus caballus] Length = 351 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 67/121 (55%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ A +E + E +P +G+N Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVDLIGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 279 CVLMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336 Query: 122 L 122 + Sbjct: 337 M 337 >gi|18079279|ref|NP_525111.1| ribonucleoside diphosphate reductase small subunit [Drosophila melanogaster] gi|12644287|sp|P48592|RIR2_DROME RecName: Full=Ribonucleoside-diphosphate reductase subunit M2; AltName: Full=Ribonucleotide reductase small subunit gi|10727628|gb|AAF58599.2| ribonucleoside diphosphate reductase small subunit [Drosophila melanogaster] gi|15292183|gb|AAK93360.1| LD41588p [Drosophila melanogaster] gi|220946286|gb|ACL85686.1| CG8975-PA [synthetic construct] gi|220955972|gb|ACL90529.1| RnrS-PA [synthetic construct] Length = 393 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 67/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +++ ++ +A +E + + +P +G+N Sbjct: 268 RDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R ++G+ ++ T+NPF +M E+I L + NFFE +V EYQ+ Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVGEYQRMGV 378 Query: 122 LK 123 + Sbjct: 379 VS 380 >gi|113195221|ref|YP_717351.1| ribonucleotide reductase small subunit [Taterapox virus] gi|90660497|gb|ABD97610.1| ribonucleotide reductase small subunit [Taterapox virus] Length = 319 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305 Query: 122 LK 123 + Sbjct: 306 MS 307 >gi|1808636|emb|CAA64118.1| G4L protein [Cowpox virus] Length = 319 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ ++++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVKSIITDAVSIEQEFLTAALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305 Query: 122 LK 123 + Sbjct: 306 MS 307 >gi|132628|sp|P20493|RIR2_VACCC RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|335366|gb|AAA48018.1| putative F4L [Vaccinia virus Copenhagen] Length = 319 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305 Query: 122 LK 123 + Sbjct: 306 MS 307 >gi|156386903|ref|XP_001634150.1| predicted protein [Nematostella vectensis] gi|156221230|gb|EDO42087.1| predicted protein [Nematostella vectensis] Length = 384 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K ++ R ++ +A ++E + +P +G+N Sbjct: 259 RDEGLHCDFACLMYK-------YLVNKPDEETVRGIIKDAVVIEQEFLTSALPVKLIGMN 311 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R + + ++ ENPF +M E I L+ + NF+E RV EYQ+ Sbjct: 312 CALMRQYIEFVADRLLVALNCQKVYN-VENPFDFM-ENISLEGKTNFYEKRVGEYQKSGV 369 Query: 122 LK 123 + Sbjct: 370 MS 371 >gi|20809684|gb|AAH28932.1| Similar to ribonucleotide reductase protein r2 class I [Homo sapiens] Length = 172 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A +E + E +P +G+N Sbjct: 47 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 99 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 100 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 157 Query: 122 LK 123 + Sbjct: 158 MS 159 >gi|169779219|ref|XP_001824074.1| ribonucleoside-diphosphate reductase small chain [Aspergillus oryzae RIB40] gi|238499845|ref|XP_002381157.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus flavus NRRL3357] gi|83772813|dbj|BAE62941.1| unnamed protein product [Aspergillus oryzae] gi|220692910|gb|EED49256.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus flavus NRRL3357] Length = 405 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + Q ++ EA +E + + +P +G+N Sbjct: 269 RDEGLHTDFACLLFS-------HLNNRPDPQIVEDVIVEAVSIEKEFLTDALPCALLGMN 321 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G F T NPF +M I L + NFFE RV +YQ+ Sbjct: 322 SNLMCQYIEFVADRLLVALGNNKYFNAT-NPFDFMD-NISLAGKTNFFEKRVGDYQKAGV 379 Query: 122 L 122 + Sbjct: 380 M 380 >gi|313213932|emb|CBY40745.1| unnamed protein product [Oikopleura dioica] Length = 418 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 65/121 (53%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K Q++ ++ +A +E + + +P +G+N Sbjct: 287 RDEGLHTDFACLMYK-------HMVQKPSQEQIIAIIRDAVSIEQEFLTDALPVRLIGMN 339 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y++F+A+R ++ ++K ENPF +M E+I L+ + NFFE +V+EY + Sbjct: 340 CDLMKTYIEFVADRLLVELDCPKIYK-VENPFDFM-EMISLEGKTNFFEKKVSEYARAGV 397 Query: 122 L 122 + Sbjct: 398 M 398 >gi|438946|gb|AAA60776.1| homolog of vaccinia virus CDS F4L (ribonucleotide reductase, small chain); putative [Variola major virus] gi|94484491|gb|ABF23604.1| ribonucleotide reductase small subunit [Variola virus] gi|94484688|gb|ABF23800.1| ribonucleotide reductase small subunit [Variola virus] gi|94484886|gb|ABF23997.1| ribonucleotide reductase small subunit [Variola virus] gi|109724274|gb|ABG43399.1| ribonucleotide reductase small subunit [Variola virus] Length = 333 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 209 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 262 CEMMKTYIKFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 319 Query: 122 LK 123 + Sbjct: 320 MS 321 >gi|885759|gb|AAA69374.1| E4L [Variola virus] gi|5830589|emb|CAB54628.1| E4L protein [Variola minor virus] gi|94483674|gb|ABF22791.1| ribonucleotide reductase small subunit [Variola virus] gi|94484287|gb|ABF23401.1| ribonucleotide reductase small subunit [Variola virus] gi|94485692|gb|ABF24799.1| ribonucleotide reductase small subunit [Variola virus] gi|94486095|gb|ABF25200.1| ribonucleotide reductase small subunit [Variola virus] gi|94486298|gb|ABF25402.1| ribonucleotide reductase small subunit [Variola virus] gi|94486501|gb|ABF25604.1| ribonucleotide reductase small subunit [Variola virus] gi|94486703|gb|ABF25805.1| ribonucleotide reductase small subunit [Variola virus] gi|94486906|gb|ABF26007.1| ribonucleotide reductase small subunit [Variola virus] gi|94487312|gb|ABF26411.1| ribonucleotide reductase small subunit [Variola virus] gi|94487921|gb|ABF27017.1| ribonucleotide reductase small subunit [Variola virus] gi|94489931|gb|ABF29017.1| ribonucleotide reductase small subunit [Variola virus] gi|109724476|gb|ABG43600.1| ribonucleotide reductase small subunit [Variola virus] gi|156635085|gb|ABU91534.1| ribonucleotide reductase small subunit [Variola virus] Length = 319 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305 Query: 122 LK 123 + Sbjct: 306 MS 307 >gi|170089003|ref|XP_001875724.1| ribonucleotide reductase, beta subunit [Laccaria bicolor S238N-H82] gi|164648984|gb|EDR13226.1| ribonucleotide reductase, beta subunit [Laccaria bicolor S238N-H82] Length = 422 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + +K PH + + ++ EA +E + + +P +G+N Sbjct: 281 RDEGMHTDFACLLFSHLK-RRPH------PEVVKHIIVEAVKIEQEFLTDALPVKLIGMN 333 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A QY++F+A+R +G E + T NPF +M +I L+ + NFFE RV++Y + Sbjct: 334 ADLMCQYIEFVADRLLVSLGNEKHYNKT-NPFDFMD-MISLQGKTNFFEKRVSDYSKAG 390 >gi|322817571|gb|EFZ25271.1| ribonucleoside-diphosphate reductase small chain, putative [Trypanosoma cruzi] Length = 337 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++ K ++ R ++ A +E + +++P +G+N Sbjct: 210 RDEGLHTDFACLLY------ENYIVNKLPTERIREIICSAVDIEREFICDSIPVRLLGMN 263 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A Y++F+A+R +G E + ++NPF +M E+I L+ + NFFE +V EYQ+ Sbjct: 264 ADLMSTYIEFVADRLLVALGNERHYN-SKNPFDFM-EMISLQGKTNFFEKKVGEYQKAGV 321 Query: 122 LK 123 + Sbjct: 322 MS 323 >gi|190896544|gb|ACE96785.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFFEKRVGEY 223 >gi|219110949|ref|XP_002177226.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411761|gb|EEC51689.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 409 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 12/127 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++++ K + ++ EA +E + + +P G +G+N Sbjct: 278 RDEGLHCSFACQLYSKLER-------KLSETDMHKLIGEAVEVEKGFVCDALPVGLIGMN 330 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA- 120 A QY++F+A+R H +G L+ ++NPF WM +I L+ + NFFE RV EYQ+ Sbjct: 331 ASLMSQYVEFVADRLLHDLGYRTLY-GSKNPFDWMD-MISLEGKTNFFEKRVGEYQKSGV 388 Query: 121 --ELKWD 125 L D Sbjct: 389 MASLSDD 395 >gi|190896528|gb|ACE96777.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFFEKRVGEY 223 >gi|170032272|ref|XP_001844006.1| ribonucleoside-diphosphate reductase small chain [Culex quinquefasciatus] gi|167872122|gb|EDS35505.1| ribonucleoside-diphosphate reductase small chain [Culex quinquefasciatus] Length = 391 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 67/121 (55%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ ++ EA ++E + + +P +G+N Sbjct: 266 RDEGLHTDFACLMFR-------YLVQKPSKERVLEIIREAVVIEQEFLTKALPVDLLGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R ++G E ++ T+NPF +M E I L+ + NFFE +V EYQ+ Sbjct: 319 CELMSQYIEFVADRLLLELGNEKIYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQKWGV 376 Query: 122 L 122 + Sbjct: 377 M 377 >gi|296227440|ref|XP_002759377.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like isoform 1 [Callithrix jacchus] Length = 351 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G F ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 279 CILMKQYIEFVADRLLVELGFSKFF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336 Query: 122 L 122 + Sbjct: 337 M 337 >gi|146418573|ref|XP_001485252.1| hypothetical protein PGUG_02981 [Meyerozyma guilliermondii ATCC 6260] gi|146390725|gb|EDK38883.1| hypothetical protein PGUG_02981 [Meyerozyma guilliermondii ATCC 6260] Length = 418 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + + ++ EA +E + + +P +G+N Sbjct: 286 RDEGLHTDFACLLFS-------HLQNRPDPEIVEKIITEAVDIEKEFFTDALPISLLGMN 338 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G + ++ NPF +M E I L + NFFE RV++YQ+ Sbjct: 339 CKLMCQYVEFVADRLLVALGNKKIYNVA-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 396 Query: 122 L 122 + Sbjct: 397 M 397 >gi|885717|gb|AAA69333.1| C8L [Variola virus] gi|885826|gb|AAA69439.1| C8L [Variola virus] gi|94483878|gb|ABF22994.1| ribonucleotide reductase small subunit [Variola virus] gi|94484081|gb|ABF23196.1| ribonucleotide reductase small subunit [Variola virus] gi|94485084|gb|ABF24194.1| ribonucleotide reductase small subunit [Variola virus] gi|94485286|gb|ABF24395.1| ribonucleotide reductase small subunit [Variola virus] gi|94485489|gb|ABF24597.1| ribonucleotide reductase small subunit [Variola virus] gi|94485894|gb|ABF25000.1| ribonucleotide reductase small subunit [Variola virus] gi|94487109|gb|ABF26209.1| ribonucleotide reductase small subunit [Variola virus] gi|94487515|gb|ABF26613.1| ribonucleotide reductase small subunit [Variola virus] gi|94487716|gb|ABF26813.1| ribonucleotide reductase small subunit [Variola virus] gi|94488123|gb|ABF27218.1| ribonucleotide reductase small subunit [Variola virus] gi|94488323|gb|ABF27417.1| ribonucleotide reductase small subunit [Variola virus] gi|94488523|gb|ABF27616.1| ribonucleotide reductase small subunit [Variola virus] gi|94488724|gb|ABF27816.1| ribonucleotide reductase small subunit [Variola virus] gi|94488925|gb|ABF28016.1| ribonucleotide reductase small subunit [Variola virus] gi|94489125|gb|ABF28215.1| ribonucleotide reductase small subunit [Variola virus] gi|94489324|gb|ABF28413.1| ribonucleotide reductase small subunit [Variola virus] gi|94489527|gb|ABF28615.1| ribonucleotide reductase small subunit [Variola virus] gi|94489726|gb|ABF28813.1| ribonucleotide reductase small subunit [Variola virus] gi|94490135|gb|ABF29220.1| ribonucleotide reductase small subunit [Variola virus] gi|109724070|gb|ABG43196.1| ribonucleotide reductase small subunit [Variola virus] gi|109724681|gb|ABG43804.1| ribonucleotide reductase small subunit [Variola virus] gi|109724885|gb|ABG44007.1| ribonucleotide reductase small subunit [Variola virus] gi|109725088|gb|ABG44209.1| ribonucleotide reductase small subunit [Variola virus] gi|109725293|gb|ABG44413.1| ribonucleotide reductase small subunit [Variola virus] gi|109725496|gb|ABG44615.1| ribonucleotide reductase small subunit [Variola virus] gi|109725700|gb|ABG44818.1| ribonucleotide reductase small subunit [Variola virus] gi|109725903|gb|ABG45020.1| ribonucleotide reductase small subunit [Variola virus] gi|109726107|gb|ABG45223.1| ribonucleotide reductase small subunit [Variola virus] gi|109726310|gb|ABG45425.1| ribonucleotide reductase small subunit [Variola virus] gi|109726513|gb|ABG45627.1| ribonucleotide reductase small subunit [Variola virus] gi|156635013|gb|ABU91466.1| ribonucleotide reductase small subunit [Variola virus] gi|156635031|gb|ABU91483.1| ribonucleotide reductase small subunit [Variola virus] gi|156635049|gb|ABU91500.1| ribonucleotide reductase small subunit [Variola virus] gi|156635067|gb|ABU91517.1| ribonucleotide reductase small subunit [Variola virus] gi|156635103|gb|ABU91551.1| ribonucleotide reductase small subunit [Variola virus] gi|156635121|gb|ABU91568.1| ribonucleotide reductase small subunit [Variola virus] gi|156635139|gb|ABU91585.1| ribonucleotide reductase small subunit [Variola virus] gi|156635158|gb|ABU91603.1| ribonucleotide reductase small subunit [Variola virus] gi|156635176|gb|ABU91620.1| ribonucleotide reductase small subunit [Variola virus] gi|156635194|gb|ABU91637.1| ribonucleotide reductase small subunit [Variola virus] gi|156635212|gb|ABU91654.1| ribonucleotide reductase small subunit [Variola virus] gi|156635230|gb|ABU91671.1| ribonucleotide reductase small subunit [Variola virus] gi|156635248|gb|ABU91688.1| ribonucleotide reductase small subunit [Variola virus] gi|156635266|gb|ABU91705.1| ribonucleotide reductase small subunit [Variola virus] gi|156635284|gb|ABU91722.1| ribonucleotide reductase small subunit [Variola virus] gi|156635320|gb|ABU91756.1| ribonucleotide reductase small subunit [Variola virus] gi|156635338|gb|ABU91773.1| ribonucleotide reductase small subunit [Variola virus] gi|156635356|gb|ABU91790.1| ribonucleotide reductase small subunit [Variola virus] gi|156635374|gb|ABU91807.1| ribonucleotide reductase small subunit [Variola virus] gi|156635392|gb|ABU91824.1| ribonucleotide reductase small subunit [Variola virus] gi|157739431|gb|ABU91739.1| ribonucleotide reductase small subunit [Variola virus] Length = 319 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIKFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305 Query: 122 LK 123 + Sbjct: 306 MS 307 >gi|157939640|ref|YP_001497012.1| ribonucleotide reductase [Tanapox virus] gi|146746356|gb|ABQ43492.1| ribonucleotide reductase [Tanapox virus] gi|146746512|gb|ABQ43647.1| ribonucleotide reductase [Tanapox virus] Length = 325 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL R ++ EA +E + E +P +G+N Sbjct: 200 RDEGLHCDFACIMFK-------HLLNPPLNSVVRDIIIEAVNIEKNFLTEAIPVKLIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G + ++NPF +M E I L+ + NFFE RV+EYQ+ + Sbjct: 253 CDLMKQYIEFVADRLLLELGCNK-YYCSKNPFDFM-ENISLEGKTNFFEKRVSEYQKMSV 310 Query: 122 LK 123 + Sbjct: 311 MS 312 >gi|190896536|gb|ACE96781.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896560|gb|ACE96793.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896566|gb|ACE96796.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFFEKRVGEY 223 >gi|73974198|ref|XP_539109.2| PREDICTED: similar to ribonucleotide reductase M2 B (TP53 inducible) isoform 2 [Canis familiaris] Length = 351 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ A +E + E +P G +G+N Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV EYQ+ A Sbjct: 279 CVLMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVAEYQRFAV 336 Query: 122 L 122 + Sbjct: 337 M 337 >gi|190896524|gb|ACE96775.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896534|gb|ACE96780.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFFEKRVGEY 223 >gi|195485577|ref|XP_002091148.1| GE13485 [Drosophila yakuba] gi|194177249|gb|EDW90860.1| GE13485 [Drosophila yakuba] Length = 393 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 67/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +++ ++ +A +E + + +P +G+N Sbjct: 268 RDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R ++G+ ++ T+NPF +M E+I L + NFFE +V EYQ+ Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVGEYQRMGV 378 Query: 122 LK 123 + Sbjct: 379 VS 380 >gi|281340156|gb|EFB15740.1| hypothetical protein PANDA_011632 [Ailuropoda melanoleuca] Length = 336 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ A +E + E +P G +G+N Sbjct: 211 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 263 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV EYQ+ A Sbjct: 264 CVLMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVAEYQRFAV 321 Query: 122 L 122 + Sbjct: 322 M 322 >gi|74025552|ref|XP_829342.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma brucei] gi|70834728|gb|EAN80230.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma brucei] Length = 337 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 64/122 (52%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++ K + + ++ A L+E + + +P +G+N Sbjct: 210 RDEGLHTDFACLLY------EKYIVNKLPRDRVLEIICNAVLIEREFICDALPVRLIGMN 263 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G + + ++NPF +M +I L+ + NFFE +V EYQ+ Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFMD-MISLQGKTNFFEKKVGEYQKAGV 321 Query: 122 LK 123 + Sbjct: 322 MS 323 >gi|145580571|pdb|2UW2|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase Subunit R2 Length = 332 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A +E + E +P +G+N Sbjct: 207 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 259 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 260 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 317 Query: 122 LK 123 + Sbjct: 318 MS 319 >gi|157126966|ref|XP_001654749.1| ribonucleoside-diphosphate reductase small chain [Aedes aegypti] gi|15638625|gb|AAL05057.1|AF411297_1 ribonucleotide reductase 2 [Aedes aegypti] gi|82469974|gb|ABB77235.1| ribonucleotide reductase small subunit R2 [Aedes aegypti] gi|108873070|gb|EAT37295.1| ribonucleoside-diphosphate reductase small chain [Aedes aegypti] Length = 397 Score = 157 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K Q++ ++ EA L+E + + +P +G+N Sbjct: 272 RDEGLHTDFACLMFK-------YLVQKPSQERVIEIIREAVLIEQEFLTKALPVDLLGMN 324 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R ++G++ ++ T+NPF +M E I L+ + NFFE +V EYQ+ Sbjct: 325 CDLMSQYIEFVADRLLLELGIDKIYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQKWGV 382 Query: 122 L 122 + Sbjct: 383 M 383 >gi|71416121|ref|XP_810103.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma cruzi strain CL Brener] gi|70874586|gb|EAN88252.1| ribonucleoside-diphosphate reductase small chain, putative [Trypanosoma cruzi] Length = 337 Score = 157 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++ K ++ R ++ A +E + +++P +G+N Sbjct: 210 RDEGLHTDFACLLY------ENYIVNKLPTERIREIICSAVDIEREFICDSIPVRLLGMN 263 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A Y++F+A+R +G E + ++NPF +M E+I L+ + NFFE +V EYQ+ Sbjct: 264 ADLMSTYIEFVADRLLVALGNERHYN-SKNPFDFM-EMISLQGKTNFFEKKVGEYQKAGV 321 Query: 122 LK 123 + Sbjct: 322 MS 323 >gi|296227442|ref|XP_002759378.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like isoform 2 [Callithrix jacchus] Length = 299 Score = 157 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N Sbjct: 174 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 226 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G F ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 227 CILMKQYIEFVADRLLVELGFSKFF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 284 Query: 122 L 122 + Sbjct: 285 M 285 >gi|258542157|ref|YP_003187590.1| ribonucleotide-diphosphate reductase subunit beta [Acetobacter pasteurianus IFO 3283-01] gi|256633235|dbj|BAH99210.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter pasteurianus IFO 3283-01] gi|256636294|dbj|BAI02263.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter pasteurianus IFO 3283-03] gi|256639347|dbj|BAI05309.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter pasteurianus IFO 3283-07] gi|256642403|dbj|BAI08358.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter pasteurianus IFO 3283-22] gi|256645458|dbj|BAI11406.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter pasteurianus IFO 3283-26] gi|256648511|dbj|BAI14452.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter pasteurianus IFO 3283-32] gi|256651564|dbj|BAI17498.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654555|dbj|BAI20482.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter pasteurianus IFO 3283-12] Length = 339 Score = 157 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH I + ENP LWT++ + + + E A+ G G Sbjct: 204 VRDETLHCLSIIRLFRVFIQENPELWTEQLRTELTDICRTIVEHEEAFIDLAFEMGAVEG 263 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 LNA + Y+ FIA+RR Q+GLEP++ T NP PW+ ++++ + NFFE R TEY + Sbjct: 264 LNAEQVKTYIHFIADRRLTQLGLEPIYNTTTNPLPWLDDMLNAVEHTNFFENRATEYSRA 323 Query: 120 A-ELKWD 125 + W+ Sbjct: 324 STSGTWE 330 >gi|149248382|ref|XP_001528578.1| ribonucleoside-diphosphate reductase small chain [Lodderomyces elongisporus NRRL YB-4239] gi|146448532|gb|EDK42920.1| ribonucleoside-diphosphate reductase small chain [Lodderomyces elongisporus NRRL YB-4239] Length = 422 Score = 157 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 64/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + + ++ EA +E + + +P +G+N Sbjct: 294 RDEGLHTDFACLLFS-------HLENRPDPKIVEKIISEAVEIEKEFFTDALPVSLLGMN 346 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G E ++K T NPF +M E I L + NFFE RV++YQ+ Sbjct: 347 CKLMCQYVEFVADRLLVALGNEKIYKVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 404 Query: 122 L 122 + Sbjct: 405 M 405 >gi|313235850|emb|CBY19835.1| unnamed protein product [Oikopleura dioica] Length = 382 Score = 157 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 65/121 (53%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K Q++ ++ +A +E + + +P +G+N Sbjct: 251 RDEGLHTDFACLMYK-------HMVQKPSQEQIIAIIRDAVSIEQEFLTDALPVRLIGMN 303 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y++F+A+R ++ ++K ENPF +M E+I L+ + NFFE +V+EY + Sbjct: 304 CDLMKTYIEFVADRLLVELDCPKIYK-VENPFDFM-EMISLEGKTNFFEKKVSEYARAGV 361 Query: 122 L 122 + Sbjct: 362 M 362 >gi|326472581|gb|EGD96590.1| ribonucleotide reductase small subunit RnrA [Trichophyton tonsurans CBS 112818] Length = 408 Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ EA +E + + +P +G+N Sbjct: 272 RDEGLHTDFACLLFS-------HLNYRPDPNAVEAIITEAVTIEQEFLTDALPCALLGMN 324 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G + + T NPF +M I L + NFFE RV +YQ+ Sbjct: 325 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMD-NISLAGKTNFFEKRVGDYQKAGV 382 Query: 122 L 122 + Sbjct: 383 M 383 >gi|254572986|ref|XP_002493602.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR) complex [Pichia pastoris GS115] gi|238033401|emb|CAY71423.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR) complex [Pichia pastoris GS115] gi|328354568|emb|CCA40965.1| ribonucleoside-diphosphate reductase subunit M2 [Pichia pastoris CBS 7435] Length = 400 Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ ++ EA +E Y + +P +G+N Sbjct: 271 RDEGLHTDFACLLFS-------HLNNRASEEIVEKIITEAVEIEKRYFTDALPVSLLGMN 323 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G + ++ NPF +M E I L + NFFE RV++YQ+ Sbjct: 324 CSLMCQYVEFVADRLLVALGNKKVYN-VNNPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381 Query: 122 L 122 + Sbjct: 382 M 382 >gi|154296564|ref|XP_001548712.1| ribonucleotide reductase small subunit [Botryotinia fuckeliana B05.10] gi|150843273|gb|EDN18466.1| ribonucleotide reductase small subunit [Botryotinia fuckeliana B05.10] Length = 407 Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +K + +Q + ++ EA +E + E +P +G+N Sbjct: 266 RDEGLHTDFACLLFSHLKH-------RPSKQAVQDVITEAVEIEQEFLTEALPCALLGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +QY++F+A+R +G + +K NPF +M E I L + NFFE RV +YQ+ Sbjct: 319 SNLMKQYIEFVADRLLLSLGNDKYYKSA-NPFDFM-ENISLAGKTNFFEKRVGDYQKAGV 376 Query: 122 L 122 + Sbjct: 377 M 377 >gi|38232564|gb|AAR15079.1| ribonucleotide reductase R2 subunit variant [Aedes albopictus] Length = 219 Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K Q++ ++ EA L+E + + +P +G+N Sbjct: 94 RDEGLHTDFACLMFK-------YLVQKPSQERVIEIIREAVLIEQEFLTKALPVDLLGMN 146 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R ++G++ ++ T+NPF +M E I L+ + NFFE +V EYQ+ Sbjct: 147 CELMSQYIEFVADRLLLELGIDKIYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQKWGV 204 Query: 122 L 122 + Sbjct: 205 M 205 >gi|195333568|ref|XP_002033462.1| GM20395 [Drosophila sechellia] gi|195582581|ref|XP_002081105.1| GD25870 [Drosophila simulans] gi|194125432|gb|EDW47475.1| GM20395 [Drosophila sechellia] gi|194193114|gb|EDX06690.1| GD25870 [Drosophila simulans] Length = 393 Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 67/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +++ ++ +A +E + + +P +G+N Sbjct: 268 RDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R ++G+ ++ T+NPF +M E+I L + NFFE +V EYQ+ Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVAEYQRMGV 378 Query: 122 LK 123 + Sbjct: 379 VS 380 >gi|302904131|ref|XP_003049009.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256729943|gb|EEU43296.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 389 Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +K + +Q + ++ +A +E + E +P +G+N Sbjct: 252 RDEGLHTDFACLLHSHLKG-------RASKQVIQDIITDAVTIEQEFLTEALPCALLGMN 304 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A +QY++F+A+R +G E ++K NPF +M E I L + NFFE RV +YQ+ Sbjct: 305 ADLMKQYIEFVADRLLVALGNEKVYKSA-NPFDFM-ENISLGGKTNFFEKRVGDYQKAGV 362 Query: 122 L 122 L Sbjct: 363 L 363 >gi|227541|prf||1706181A ribonucleotide reductase Length = 290 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A +E + E +P +G+N Sbjct: 165 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 217 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 218 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 275 Query: 122 LK 123 + Sbjct: 276 MS 277 >gi|168031987|ref|XP_001768501.1| predicted protein [Physcomitrella patens subsp. patens] gi|162680214|gb|EDQ66652.1| predicted protein [Physcomitrella patens subsp. patens] Length = 331 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + K +++ ++ EA +E + E + VG+N Sbjct: 201 RDEGLHCDFACLLYTLLI-------NKLSEERVYEIVCEAVEIEREFVCEALSCDLVGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +Y+ F+A+R +G + NPF WM E+I L+ + NFFE RV EYQ+ + Sbjct: 254 KILMSEYIDFVADRLLVSLGYRKKYNAL-NPFDWM-ELISLQGKTNFFEKRVGEYQKASV 311 Query: 122 LK 123 + Sbjct: 312 MS 313 >gi|302497417|ref|XP_003010709.1| hypothetical protein ARB_03411 [Arthroderma benhamiae CBS 112371] gi|291174252|gb|EFE30069.1| hypothetical protein ARB_03411 [Arthroderma benhamiae CBS 112371] Length = 408 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ EA +E + + +P +G+N Sbjct: 272 RDEGLHTDFACLLFS-------HLNYRPDPSAVEAIITEAVTIEQEFLTDALPCALLGMN 324 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G + + T NPF +M I L + NFFE RV +YQ+ Sbjct: 325 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMD-NISLAGKTNFFEKRVGDYQKAGV 382 Query: 122 L 122 + Sbjct: 383 M 383 >gi|326916502|ref|XP_003204546.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like [Meleagris gallopavo] Length = 339 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + K +++ + ++ A L+E + E +P +G+N Sbjct: 214 RDEGLHCDFACLMFKHLIR-------KPSEERVKEIIMNAVLIEQEFLTEALPVKLIGMN 266 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G ++K ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 267 CTLMKQYIEFVADRLMLELGFRKIYK-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 324 Query: 122 LK 123 + Sbjct: 325 MS 326 >gi|327298815|ref|XP_003234101.1| ribonucleotide reductase small subunit RnrA [Trichophyton rubrum CBS 118892] gi|326464279|gb|EGD89732.1| ribonucleotide reductase small subunit RnrA [Trichophyton rubrum CBS 118892] Length = 408 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ EA +E + + +P +G+N Sbjct: 272 RDEGLHTDFACLLFS-------HLNYRPDPSAVEAIITEAVTIEQEFLTDALPCALLGMN 324 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G + + T NPF +M I L + NFFE RV +YQ+ Sbjct: 325 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMD-NISLAGKTNFFEKRVGDYQKAGV 382 Query: 122 L 122 + Sbjct: 383 M 383 >gi|7023557|dbj|BAA92005.1| unnamed protein product [Homo sapiens] Length = 351 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 70/121 (57%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGVN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 279 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336 Query: 122 L 122 + Sbjct: 337 M 337 >gi|190896570|gb|ACE96798.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896582|gb|ACE96804.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEEQVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNAA-NPFDWM-ELISLQGKTNFFEKRVGEY 223 >gi|168015485|ref|XP_001760281.1| predicted protein [Physcomitrella patens subsp. patens] gi|162688661|gb|EDQ75037.1| predicted protein [Physcomitrella patens subsp. patens] Length = 330 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + L K + + ++ EA ++E + E + VG+N Sbjct: 200 RDEGLHCDFACLLYTL-------LNNKLSEDRVYEIVCEAVVIEQEFVCEALSCDLVGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +Y+ F+A+R +G + + NPF WM E+I L+ + NFFE RV EYQ+ + Sbjct: 253 KTLMSEYIDFVADRLLVSLGYPKKYN-SHNPFDWM-ELISLQGKTNFFEKRVGEYQKASV 310 Query: 122 LK 123 + Sbjct: 311 MS 312 >gi|37551487|gb|AAQ93139.1| ribonucleotide reductase small subunit [Vaccinia virus] gi|38348909|gb|AAR17885.1| ribonucleotide reductase small subunit [Vaccinia virus] gi|88900660|gb|ABD57572.1| VACV040 [Vaccinia virus] gi|90819703|gb|ABD98513.1| VACV-DUKE-051 [Vaccinia virus] Length = 319 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R ++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRYIITDAVSIEQEFLTAALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305 Query: 122 LK 123 + Sbjct: 306 MS 307 >gi|193784694|dbj|BAG53847.1| unnamed protein product [Homo sapiens] gi|193787382|dbj|BAG52588.1| unnamed protein product [Homo sapiens] Length = 297 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A +E + E +P +G+N Sbjct: 172 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 224 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 225 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 282 Query: 122 LK 123 + Sbjct: 283 MS 284 >gi|190896572|gb|ACE96799.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896574|gb|ACE96800.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896576|gb|ACE96801.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896578|gb|ACE96802.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEEQVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFFEKRVGEY 223 >gi|296809816|ref|XP_002845246.1| ribonucleotide reductase [Arthroderma otae CBS 113480] gi|238842634|gb|EEQ32296.1| ribonucleotide reductase [Arthroderma otae CBS 113480] Length = 405 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ EA +E + + +P +G+N Sbjct: 269 RDEGLHTDFACLLFS-------HLNYRPDPTAVEAIITEAVSIEQEFLTDALPCALLGMN 321 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G + + T NPF +M I L + NFFE RV +YQ+ Sbjct: 322 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMD-NISLAGKTNFFEKRVGDYQKAGV 379 Query: 122 L 122 + Sbjct: 380 M 380 >gi|325953830|ref|YP_004237490.1| ribonucleoside-diphosphate reductase [Weeksella virosa DSM 16922] gi|323436448|gb|ADX66912.1| Ribonucleoside-diphosphate reductase [Weeksella virosa DSM 16922] Length = 323 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 39/120 (32%), Positives = 65/120 (54%), Gaps = 8/120 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++ + ++ +A +E + E +P +G+N Sbjct: 196 RDEGLHCDFACLLY------VNHLKNKLPEETVQKIIADAVEVEKEFVTEALPVRLIGMN 249 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G + ++ T NPF +M E+I L+ + NFFE RV EYQ+ Sbjct: 250 AELMCQYIEFVADRLLDALGCKKVWNAT-NPFDFM-ELISLQGKTNFFERRVGEYQKSGV 307 >gi|255954081|ref|XP_002567793.1| Pc21g07530 [Penicillium chrysogenum Wisconsin 54-1255] gi|211589504|emb|CAP95650.1| Pc21g07530 [Penicillium chrysogenum Wisconsin 54-1255] Length = 400 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + H+ + + ++ EA +E + + +P +G+N Sbjct: 264 RDEGLHTDFACLLFS-------HMNHRPDPKVVEEIIVEAVGIEQEFLTDALPCALLGMN 316 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G + + NPF +M E I L + NFFE RV +YQ+ Sbjct: 317 SKLMCQYIEFVADRLLVALGNKKYYNSA-NPFDFM-ESISLAGKTNFFEKRVGDYQKAGV 374 Query: 122 L 122 + Sbjct: 375 M 375 >gi|190896568|gb|ACE96797.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896580|gb|ACE96803.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEEQVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNAA-NPFDWM-ELISLQGKTNFFEKRVGEY 223 >gi|168049349|ref|XP_001777126.1| predicted protein [Physcomitrella patens subsp. patens] gi|162671569|gb|EDQ58119.1| predicted protein [Physcomitrella patens subsp. patens] Length = 325 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + L K + + ++ EA +E + E + VG+N Sbjct: 197 RDEGLHCDFACLLYTL-------LNNKLSEDRVHEIVCEAVDIEREFVCEALSCDLVGMN 249 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +Y+ F+A+R +G + NPF WM E+I L+ + NFFE RV EYQ+ + Sbjct: 250 KIMMSEYIDFVADRLLVSLGYNKRYN-ARNPFDWM-ELISLQGKTNFFEKRVGEYQKASV 307 Query: 122 LK 123 + Sbjct: 308 MS 309 >gi|332247270|ref|XP_003272776.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like isoform 2 [Nomascus leucogenys] gi|332247272|ref|XP_003272777.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like isoform 3 [Nomascus leucogenys] Length = 297 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +++ R ++ A +E + E +P +G+N Sbjct: 172 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 224 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 225 CILMKQYIEFVADRLMLELGFGKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 282 Query: 122 LK 123 + Sbjct: 283 MS 284 >gi|294890631|ref|XP_002773236.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus ATCC 50983] gi|239878288|gb|EER05052.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus ATCC 50983] Length = 350 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 8/121 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N + +T+ ++ ++ A +E + E++P +G+N Sbjct: 208 RDEGLHADFACLLYNMMH------YTRLPDERVHEIVRGAVDVERVFISESLPVSLIGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +Y++F+A+R +G L+ T NPF WM +I L+ + NFFE RV EYQ+G Sbjct: 262 SQLMCRYIEFVADRLLVALGHPKLYNAT-NPFDWMK-MISLQGKTNFFEKRVGEYQKGGV 319 Query: 122 L 122 + Sbjct: 320 M 320 >gi|46446983|ref|YP_008348.1| ribonucleoside-diphosphate reductase small chain [Candidatus Protochlamydia amoebophila UWE25] gi|46400624|emb|CAF24073.1| probable ribonucleoside-diphosphate reductase small chain [Candidatus Protochlamydia amoebophila UWE25] Length = 323 Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +Q+ + P + + ++ A +E + + +P +G+N Sbjct: 198 RDEGLHCDFACLLYSQLNNKLP-------LETLQAIISHAVAIEKEFVQDALPVRLIGMN 250 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G L+ +NPF +M +I + + NFFE RV+EYQ+ Sbjct: 251 ATLMCQYIEFVADRLLVALGSPKLYN-VDNPFDFMD-LISMPGKTNFFERRVSEYQKSGV 308 Query: 122 LK 123 + Sbjct: 309 MS 310 >gi|241951066|ref|XP_002418255.1| ribonucleoside-diphosphate reductase small chain 1, putative; ribonucleotide reductase r2 subunit 1, putative; ribonucleotide reductase small subunit 1, putative [Candida dubliniensis CD36] gi|223641594|emb|CAX43555.1| ribonucleoside-diphosphate reductase small chain 1, putative [Candida dubliniensis CD36] Length = 413 Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL + + ++ EA +E Y + +P +G+N Sbjct: 285 RDEGLHTDFACLLF-------AHLQNRPSPEIVEKIITEAVDVEKEYFTDALPVSLLGMN 337 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G + ++ T NPF +M E I L + NFFE RV++YQ+ Sbjct: 338 CNLMCQYIEFVADRLLLALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 395 Query: 122 L 122 + Sbjct: 396 M 396 >gi|194474072|ref|NP_001124015.1| ribonucleoside-diphosphate reductase subunit M2 B [Rattus norvegicus] gi|149066498|gb|EDM16371.1| ribonucleotide reductase M2 B (TP53 inducible) (predicted) [Rattus norvegicus] Length = 351 Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 68/121 (56%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ ++ +A +E + E +P G +G+N Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVMEIIVDAVKIEQEFLTEALPVGLIGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 279 CVLMKQYIEFVADRLLGELGFSKIF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336 Query: 122 L 122 + Sbjct: 337 M 337 >gi|224100309|ref|XP_002311826.1| predicted protein [Populus trichocarpa] gi|222851646|gb|EEE89193.1| predicted protein [Populus trichocarpa] Length = 342 Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ + QK ++ EA +E + E +P +G+N Sbjct: 213 RDEGLHCDFACLLYSLLQRQLHW-------QKVYHIVGEAVEIETKFVCEALPCALIGMN 265 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A Y++F+A+R +G + + ENPF WM E I L+ + NFFE RV +YQ+ + Sbjct: 266 ATLMGDYIKFVADRLLVALGYQKKYN-VENPFDWM-EFISLQGKANFFERRVGDYQKASV 323 Query: 122 LK 123 + Sbjct: 324 MS 325 >gi|45184688|ref|NP_982406.1| AAL136Cp [Ashbya gossypii ATCC 10895] gi|44980034|gb|AAS50230.1| AAL136Cp [Ashbya gossypii ATCC 10895] Length = 422 Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K + ++ EA +E Y + +P +G+N Sbjct: 292 RDEGLHTDFACLLF-------AHLNNKPDTEIVEKIITEAVEIEKRYFQDAIPVALLGMN 344 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G + + + NPF +M E I L + NFFE RV++YQ+ Sbjct: 345 SSLMNQYVEFVADRLLVALGNKKYYNVS-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 402 Query: 122 L 122 + Sbjct: 403 M 403 >gi|254442775|ref|ZP_05056251.1| ribonucleoside-diphosphate reductase, beta subunit [Verrucomicrobiae bacterium DG1235] gi|198257083|gb|EDY81391.1| ribonucleoside-diphosphate reductase, beta subunit [Verrucomicrobiae bacterium DG1235] Length = 361 Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 50/123 (40%), Positives = 76/123 (61%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES H+ ++ + ENP +WT EF+ + R + EA LE + + +P +GL Sbjct: 232 LRDESNHIELLRNLFMDLIEENPDVWTPEFKAELRDAMSEAIALEKEFIADCLPVDSIGL 291 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 QY+ +IA+RR GL+PL NP PW++E++D+KKE+NFFE RVTEYQ+ + Sbjct: 292 RKEDFVQYIDYIADRRLEGCGLDPLTPGVTNPLPWLAEMMDIKKEQNFFEGRVTEYQKAS 351 Query: 121 ELK 123 L+ Sbjct: 352 SLE 354 >gi|17974949|ref|NP_536463.1| C10L [Monkeypox virus Zaire-96-I-16] gi|17529816|gb|AAL40494.1|AF380138_36 C10L [Monkeypox virus Zaire-96-I-16] gi|51342196|gb|AAU01240.1| MPXV-WRAIR030 [Monkeypox virus] gi|58220500|gb|AAW67788.1| MPXV-SL-030 [Monkeypox virus] gi|59858836|gb|AAX09131.1| MPXV-COP-030 [Monkeypox virus] gi|68448710|gb|AAY96833.1| ribonucleotide reductase small subunit [Monkeypox virus] gi|68448912|gb|AAY97034.1| ribonucleotide reductase small subunit [Monkeypox virus] gi|68449113|gb|AAY97234.1| ribonucleotide reductase small subunit [Monkeypox virus] gi|68449313|gb|AAY97433.1| ribonucleotide reductase small subunit [Monkeypox virus] gi|68449512|gb|AAY97631.1| ribonucleotide reductase small subunit [Monkeypox virus] gi|300872658|gb|ADK39060.1| ribonucleotide reductase small subunit [Monkeypox virus] Length = 319 Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R ++ A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRFIITNAVSIEQEFLTVALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305 Query: 122 LK 123 + Sbjct: 306 MS 307 >gi|323098642|gb|ADX22879.1| ribonucleotide reductase small subunit [Monkeypox virus] Length = 319 Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R ++ A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRFIITNAVSIEQEFLTVALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305 Query: 122 LK 123 + Sbjct: 306 MS 307 >gi|322499081|emb|CBZ34153.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 269 Score = 156 bits (396), Expect = 9e-37, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 8/119 (6%) Query: 5 SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPS 64 LH +F + N H+ K +++ ++ +A +E + + +P +G+NA Sbjct: 145 GLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMNAEL 198 Query: 65 CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAELK 123 QY++F+A+R +G E ++ T+ PF +M E+I L+ + NFFE +V EYQ+ + Sbjct: 199 MAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAGVMS 255 >gi|323098445|gb|ADX22683.1| ribonucleotide reductase small subunit [Monkeypox virus] Length = 319 Score = 156 bits (396), Expect = 9e-37, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R ++ A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRFIITNAVSIEQEFLTVALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305 Query: 122 LK 123 + Sbjct: 306 MS 307 >gi|328771482|gb|EGF81522.1| hypothetical protein BATDEDRAFT_16297 [Batrachochytrium dendrobatidis JAM81] Length = 336 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + L K + ++HEA +E ++ E++P +G+N Sbjct: 210 RDEGLHTDFACLLFTL-------LNNKPTDSVIQQIIHEAVTIEQEFSTESLPVALIGMN 262 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A +QY++F+A+R ++G+ + NPF +M +I L+ + NFFE RV EYQ+ Sbjct: 263 ANLMKQYIEFVADRLFIELGMPKKY-GVGNPFDFMD-MISLQGKTNFFEKRVGEYQKSGV 320 Query: 122 LK 123 + Sbjct: 321 MN 322 >gi|196233679|ref|ZP_03132520.1| Ribonucleoside-diphosphate reductase [Chthoniobacter flavus Ellin428] gi|196222349|gb|EDY16878.1| Ribonucleoside-diphosphate reductase [Chthoniobacter flavus Ellin428] Length = 390 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 50/123 (40%), Positives = 71/123 (57%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES H+ G ++ Q+ ENP +WT EF+ + + E LE + + +P+ VG+ Sbjct: 260 LRDESNHIELGRYILTQLIAENPDIWTPEFRAELVEFMREGVELEKEFVRDCLPEDGVGM 319 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 Y+++ A+RR + L L NPF W+ EVI L+KEKNFFETRVTEYQ Sbjct: 320 TQADFLTYVEYNADRRLAGLDLPALSGVKTNPFAWLDEVIFLRKEKNFFETRVTEYQTSG 379 Query: 121 ELK 123 LK Sbjct: 380 SLK 382 >gi|50311465|ref|XP_455757.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49644893|emb|CAG98465.1| KLLA0F15103p [Kluyveromyces lactis] Length = 401 Score = 155 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K + ++ EA +E Y + +P +G+N Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPNPEIVEKIITEAVEIEKRYFMDALPVSLLGMN 323 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G + F T NPF +M E I L + NFFE RV++YQ+ Sbjct: 324 ADLMNQYVEFVADRLLVALGNKKYFNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381 Query: 122 L 122 + Sbjct: 382 I 382 >gi|71083845|ref|YP_266565.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Pelagibacter ubique HTCC1062] gi|71062958|gb|AAZ21961.1| ribonucleoside-diphosphate reductase beta chain [Candidatus Pelagibacter ubique HTCC1062] Length = 337 Score = 155 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 1/122 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH N I + + ENP +WT E + + E A+ G G Sbjct: 207 VRDETLHCNSMIRLFKEFIHENPEIWTPELKAELYKACRTIIEHEDAFIDLAFEMGPMQG 266 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A + Y++FIANRR Q+GLEP++ +NP W+ +++ + NFFE R TEY + Sbjct: 267 LTAQDVKLYIRFIANRRLSQLGLEPIYDVDKNPLTWLDSMLNAVEHMNFFEGRSTEYSKA 326 Query: 120 AE 121 A Sbjct: 327 AT 328 >gi|58040422|ref|YP_192386.1| ribonucleotide-diphosphate reductase subunit beta [Gluconobacter oxydans 621H] gi|58002836|gb|AAW61730.1| Ribonucleoside-diphosphate reductase beta chain [Gluconobacter oxydans 621H] Length = 339 Score = 155 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 39/127 (30%), Positives = 69/127 (54%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH I + EN +WT EF+++ + E A+ G G Sbjct: 204 VRDETLHCLSMIRLFRTFVRENSEIWTPEFREELTQICRTTVEHEDAFIDLCFEMGPVEG 263 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +++ ++Y++FIA+RR Q+GL+P++ NP PW+ ++++ + NFFE R TEY + Sbjct: 264 MSSEDVKRYIRFIADRRLTQLGLDPVYGQESNPLPWIDDMLNAVEHANFFENRSTEYSRA 323 Query: 120 A-ELKWD 125 + W+ Sbjct: 324 STSGTWE 330 >gi|68481406|ref|XP_715342.1| hypothetical protein CaO19.5801 [Candida albicans SC5314] gi|68481537|ref|XP_715277.1| hypothetical protein CaO19.13223 [Candida albicans SC5314] gi|46436893|gb|EAK96248.1| hypothetical protein CaO19.13223 [Candida albicans SC5314] gi|46436961|gb|EAK96315.1| hypothetical protein CaO19.5801 [Candida albicans SC5314] gi|238882096|gb|EEQ45734.1| ribonucleoside-diphosphate reductase small chain 1 [Candida albicans WO-1] Length = 413 Score = 155 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL + + ++ EA +E Y + +P +G+N Sbjct: 285 RDEGLHTDFACLLF-------AHLQNRPSPEIVERIITEAVDVEKEYFTDALPVSLLGMN 337 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G + ++ T NPF +M E I L + NFFE RV++YQ+ Sbjct: 338 CNLMCQYIEFVADRLLLALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 395 Query: 122 L 122 + Sbjct: 396 M 396 >gi|91763118|ref|ZP_01265082.1| ribonucleotide-diphosphate reductase beta subunit [Candidatus Pelagibacter ubique HTCC1002] gi|91717531|gb|EAS84182.1| ribonucleotide-diphosphate reductase beta subunit [Candidatus Pelagibacter ubique HTCC1002] Length = 342 Score = 155 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 1/122 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH N I + + ENP +WT E + + E A+ G G Sbjct: 212 VRDETLHCNSMIRLFKEFIHENPEIWTPELKAELYKACRTIIEHEDAFIDLAFEMGPMQG 271 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A + Y++FIANRR Q+GLEP++ +NP W+ +++ + NFFE R TEY + Sbjct: 272 LTAQDVKLYIRFIANRRLSQLGLEPIYDVDKNPLTWLDSMLNAVEHMNFFEGRSTEYSKA 331 Query: 120 AE 121 A Sbjct: 332 AT 333 >gi|303272255|ref|XP_003055489.1| predicted protein [Micromonas pusilla CCMP1545] gi|226463463|gb|EEH60741.1| predicted protein [Micromonas pusilla CCMP1545] Length = 322 Score = 155 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 66/121 (54%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +K ++ + ++ +A +E + + + VG+N Sbjct: 192 RDEGLHCDFACLLYSMLKH-------PLEPERLQEIVKDAVEIEKEFVCDALSCALVGMN 244 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A +Y++F+A+R Q+G++ ++ T NPF WM E I L+ + NFFE RV EYQ+ Sbjct: 245 ADLMSEYIEFVADRLLVQLGVDKVWN-TPNPFDWM-ESISLQGKTNFFERRVGEYQRNGV 302 Query: 122 L 122 + Sbjct: 303 M 303 >gi|307192386|gb|EFN75622.1| Ribonucleoside-diphosphate reductase subunit M2 [Harpegnathos saltator] Length = 344 Score = 155 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K ++ +T++ +A +E + + +P +G+N Sbjct: 214 RDEGLHCDFACLMFK-------HVIQKPSFERVKTIIMDAVEIEKEFLTQALPVKLIGMN 266 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 Y++F+A+R +G + ++ +ENPF +M I L+ + NFFE +V EY++ Sbjct: 267 CTLMCTYIEFVADRLFVALGFDKVYN-SENPFSFMD-FISLEGKTNFFEKKVGEYKKFGV 324 Query: 122 LK 123 ++ Sbjct: 325 ME 326 >gi|195436539|ref|XP_002066225.1| GK22247 [Drosophila willistoni] gi|194162310|gb|EDW77211.1| GK22247 [Drosophila willistoni] Length = 395 Score = 155 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 66/121 (54%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +++ ++ +A +E + +P +G+N Sbjct: 270 RDEGLHCDFAVLMFQ-------HLVQRPSRERIIEIIRDAVQIEQEFLTVALPVNLIGMN 322 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R ++G+ ++ T+NPF +M E+I L + NFFE +V EYQ+ Sbjct: 323 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFSFM-EMISLDGKTNFFEKKVGEYQRMGV 380 Query: 122 L 122 + Sbjct: 381 V 381 >gi|46122063|ref|XP_385585.1| hypothetical protein FG05409.1 [Gibberella zeae PH-1] Length = 399 Score = 155 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +K + +Q + ++ +A +E + E +P +G+N Sbjct: 262 RDEGLHTDFACLLHSHLKG-------RASKQMIQDIITDAVSIEQEFLTEALPCALLGMN 314 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +QY++F+A+R +G E ++K + NPF +M E I L + NFFE RV +YQ+ Sbjct: 315 SNLMKQYIEFVADRLLVALGNEKVYK-STNPFDFM-ENISLGGKTNFFEKRVADYQKAGV 372 Query: 122 L 122 L Sbjct: 373 L 373 >gi|79160106|gb|AAI08038.1| Rrm2b protein [Danio rerio] Length = 349 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH NF + + + K + ++ +A +E + E +P +G+N Sbjct: 224 RDEGLHCNFACLMYSYLVK-------KPSVDRVNDIIAKAVSIEQEFLTEALPVNLIGMN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R +GL + +ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 277 CSLMKQYIEFVADRLLTDLGLPKAY-CSENPFDFM-ESISLEGKTNFFEKRVAEYQRLGV 334 Query: 122 LK 123 + Sbjct: 335 MS 336 >gi|301166951|emb|CBW26530.1| putative ribonucleoside-diphosphate reductase small chain subunit [Bacteriovorax marinus SJ] Length = 322 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 7/123 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH F + + E + ++ ++ EA +E + E +P +G+N Sbjct: 195 RDEGLHCEFACHIHELLTPEE-----QLNKETITQIITEAVSIEKEFITEAIPVSLIGMN 249 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A +Y++F+A+ +++G E + TENPF WM E+I L+ + NFFE RV+EYQ+ Sbjct: 250 ADMMSRYIEFVADYWLNRLGCEKAYN-TENPFDWM-ELISLEGKTNFFEKRVSEYQKPGV 307 Query: 122 LKW 124 L Sbjct: 308 LGD 310 >gi|195172750|ref|XP_002027159.1| GL20023 [Drosophila persimilis] gi|198459455|ref|XP_001361381.2| GA21447 [Drosophila pseudoobscura pseudoobscura] gi|194112972|gb|EDW35015.1| GL20023 [Drosophila persimilis] gi|198136695|gb|EAL25959.2| GA21447 [Drosophila pseudoobscura pseudoobscura] Length = 391 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 68/122 (55%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + + HL + +++ ++ +A +E + E +P +G+N Sbjct: 266 RDEGLHCDFAVLMYH-------HLVQRPKRERIIEIIRDAVEIEQEFLTEALPVNLIGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R ++G+ ++ T+NPF +M E+I L + NFFE +V EYQ+ Sbjct: 319 CVLMSQYIEFVADRLLGELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVAEYQRMGV 376 Query: 122 LK 123 + Sbjct: 377 VT 378 >gi|322795965|gb|EFZ18591.1| hypothetical protein SINV_11129 [Solenopsis invicta] Length = 426 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + I K + ++++ +A +E + + +P +G+N Sbjct: 296 RDEGLHCDFACLIFKHIIQ-------KPSFEHVKSIIMDAVEIEKEFLTQALPVELIGMN 348 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 Y++F+A+R +G E ++ +ENPF +M+ I L+ + NFFE +V EY++ Sbjct: 349 CSLMCNYIEFVADRLFVALGFEKVYN-SENPFSFMN-FISLEGKTNFFEKKVGEYKKFGV 406 Query: 122 LK 123 ++ Sbjct: 407 VE 408 >gi|302783485|ref|XP_002973515.1| hypothetical protein SELMODRAFT_173451 [Selaginella moellendorffii] gi|302787555|ref|XP_002975547.1| hypothetical protein SELMODRAFT_175019 [Selaginella moellendorffii] gi|300156548|gb|EFJ23176.1| hypothetical protein SELMODRAFT_175019 [Selaginella moellendorffii] gi|300158553|gb|EFJ25175.1| hypothetical protein SELMODRAFT_173451 [Selaginella moellendorffii] Length = 347 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 64/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + + + K +++ + ++ +A +E + E + VG+N Sbjct: 217 RDEGLHCDFACLLYSLLNV-------KLDEKRVKEIVSDAVEIERQFVCEALSCDLVGMN 269 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY+ F+A+R +G LF NPF WM +I L+ + NFFE RV EYQ+ + Sbjct: 270 ARLMSQYIDFVADRLMVVLGYNKLFNAI-NPFDWMD-LISLQGKTNFFEKRVGEYQKASV 327 Query: 122 L 122 + Sbjct: 328 M 328 >gi|18640273|ref|NP_570429.1| CMLV039 [Camelpox virus] gi|18482949|gb|AAL73746.1|AF438165_36 ribonucleotide reductase small subunit [Camelpox virus M-96] gi|19717972|gb|AAG37497.1| CMP39L [Camelpox virus CMS] Length = 319 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ +++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVISIITDAVSIEQEFLTVALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y++F+A+R ++G + ++ NPF +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVI-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305 Query: 122 LK 123 + Sbjct: 306 MS 307 >gi|55742360|ref|NP_001007164.1| ribonucleoside-diphosphate reductase subunit M2 B [Danio rerio] gi|29561808|emb|CAD87804.1| novel protein similar to vertebrate ribonucleotide reductase M2 B (TP53 inducible) (RRM2B) [Danio rerio] Length = 349 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH NF + + + K + ++ +A +E + E +P +G+N Sbjct: 224 RDEGLHCNFACLIYSYLVK-------KPSVDRVNDIIAKAVSIEQEFLTEALPVNLIGMN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+A+R +GL + +ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 277 CSLMKQYIEFVADRLLTDLGLPKAY-CSENPFDFM-ESISLEGKTNFFEKRVAEYQRLGV 334 Query: 122 LK 123 + Sbjct: 335 MS 336 >gi|255711354|ref|XP_002551960.1| KLTH0B03938p [Lachancea thermotolerans] gi|238933338|emb|CAR21522.1| KLTH0B03938p [Lachancea thermotolerans] Length = 403 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++ EA +E Y + +P +G+N Sbjct: 273 RDEGLHTDFACLLF-------AHLKNKPDPAIIERIITEAVEIEQRYFRDALPVSLLGMN 325 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G + + T NPF +M E I L + NFFE RV++YQ+ Sbjct: 326 ADLMNQYVEFVADRLLVALGNQKFYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 383 Query: 122 L 122 + Sbjct: 384 M 384 >gi|110802082|ref|YP_699620.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium perfringens SM101] gi|110682583|gb|ABG85953.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium perfringens SM101] Length = 344 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I ++K E P ++TKE +++ R M+ EIA+ H + G+N Sbjct: 218 RDENTHLWLFRSIIKELKEEIPEVFTKELKEELREMMRTGVEHEIAWGHYVIGDNVTGIN 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119 E+Y+++I N R IGLEPLF+ Y ENP PW+ D + + +FFE + T Y + Sbjct: 278 KNLIERYIKYIGNLRAKAIGLEPLFEGYNENPAPWVDYYADANQVKTDFFEAKSTAYAKA 337 Query: 120 AELKWD 125 L D Sbjct: 338 GALIDD 343 >gi|221120499|ref|XP_002159812.1| PREDICTED: similar to hCG23833 [Hydra magnipapillata] Length = 387 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 67/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K +++ + ++ +A +EI + E++P +G+N Sbjct: 255 RDEGLHCDFACLMYK-------HIVNKPSEERVKQIIRDAVAIEIEFLTESLPCDLLGMN 307 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y++F A+R + +G + ENPF +M E I L ++ NFFE+RV++YQ+ Sbjct: 308 KSLMKTYIEFCADRLINALGYSKEWN-VENPFDFM-ENISLARKANFFESRVSDYQKAGV 365 Query: 122 LK 123 + Sbjct: 366 MD 367 >gi|302696699|ref|XP_003038028.1| hypothetical protein SCHCODRAFT_12788 [Schizophyllum commune H4-8] gi|300111725|gb|EFJ03126.1| hypothetical protein SCHCODRAFT_12788 [Schizophyllum commune H4-8] Length = 377 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 9/120 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H F + + HL + + ++ EA +E + + +P +G+N Sbjct: 257 RDEGMHTEFACLLFS-------HLRHRPHPSVVQRIVKEAVAIEHEFLSDALPVSLIGMN 309 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R + +G ++ T NPF +M +I L+ + NFFE RV+EY + Sbjct: 310 AALMRQYIEFVADRLLYSLGQNKIYNAT-NPFDFMD-MISLQGKTNFFEKRVSEYAKANV 367 >gi|195119943|ref|XP_002004488.1| GI19586 [Drosophila mojavensis] gi|193909556|gb|EDW08423.1| GI19586 [Drosophila mojavensis] Length = 393 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +++ ++ +A +E + + +P +G+N Sbjct: 268 RDEGLHCDFAVMMFR-------HLVQRPSRERIIEIISDAVTIEQEFLTDALPVNLIGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R ++G+ ++ T+NPF +M E+I L + NFFE +V EYQ+ Sbjct: 321 CALMSQYIEFVADRLLVELGVGKIYN-TKNPFTFM-EMISLDGKTNFFEKKVGEYQRMGV 378 Query: 122 LK 123 Sbjct: 379 TS 380 >gi|156087150|ref|XP_001610982.1| ribonucleoside-diphosphate reductase small subunit [Babesia bovis T2Bo] gi|154798235|gb|EDO07414.1| ribonucleoside-diphosphate reductase small subunit, putative [Babesia bovis] Length = 339 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 73/121 (60%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +FG + +++K + P + + ++ EA +E + +++P +G+N Sbjct: 214 RDEGLHADFGCFIYSKLKHKLP-------AECVQQIIKEAVAVERVFVCDSLPTDLIGMN 266 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G+ P++K T+NPF WM E+I ++ + NFFE RV EYQ+ Sbjct: 267 SMLMAQYIEFVADRLLQALGVPPVYK-TKNPFEWM-ELISVQGKTNFFEKRVGEYQKSGI 324 Query: 122 L 122 L Sbjct: 325 L 325 >gi|194883840|ref|XP_001976005.1| GG22616 [Drosophila erecta] gi|190659192|gb|EDV56405.1| GG22616 [Drosophila erecta] Length = 393 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + + H ++ ++ +A +E + + +P +G+N Sbjct: 268 RDEGLHCDFAVLMFQHLVQRPKH-------ERIIEIIRDAVAIEQEFLTDALPVNLIGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R ++G+ ++ T+NPF +M E+I L + NFFE +V EYQ+ Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVAEYQRMGV 378 Query: 122 LK 123 Sbjct: 379 AS 380 >gi|303278144|ref|XP_003058365.1| predicted protein [Micromonas pusilla CCMP1545] gi|226459525|gb|EEH56820.1| predicted protein [Micromonas pusilla CCMP1545] Length = 338 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +L K R ++ EA +E + + +P VG+N Sbjct: 208 RDEGLHRDFACLLYS-------YLQNKPDVSIVRQIVCEAVEIEKEFVCDALPVSLVGMN 260 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +Y++F+A+ Q+GLE + NPF +M E+I L+ + NFFE RV EYQ+ Sbjct: 261 KDLMSEYIEFVADHLLGQLGLEKEYNTV-NPFEFM-ELISLQGKTNFFEKRVGEYQKSGV 318 Query: 122 L 122 + Sbjct: 319 M 319 >gi|74025548|ref|XP_829340.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma brucei] gi|70834726|gb|EAN80228.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma brucei] Length = 337 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 62/122 (50%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++ K + + ++ A +E + + +P +G+N Sbjct: 210 RDEGLHTDFACLLY------EKYIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G + ++NPF +M +I L+ + NFFE +V EYQ+ Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHCN-SKNPFDFMD-MISLQGKTNFFEKKVGEYQKAGV 321 Query: 122 LK 123 + Sbjct: 322 MS 323 >gi|4836362|gb|AAD30422.1|AF117061_1 ribonucleotide reductase R2 subunit [Aedes albopictus] Length = 398 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K Q++ ++ EA L+E + + +P +G+N Sbjct: 273 RDEGLHTDFACLMFK-------YLVQKPSQERVIEIIREAVLIEQEFLTKALPVDLLGMN 325 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F A+R ++G++ ++ T+NPF +M E I L+ + NFFE +V EYQ+ Sbjct: 326 CELMSQYIEFEADRLLLELGIDKIYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQKWGV 383 Query: 122 L 122 + Sbjct: 384 M 384 >gi|290977320|ref|XP_002671386.1| predicted protein [Naegleria gruberi] gi|284084954|gb|EFC38642.1| predicted protein [Naegleria gruberi] Length = 338 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 68/122 (55%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +K +TK QQ +++ EA +E + E++P +G+N Sbjct: 212 RDEGLHTDFACLLYSTLK------FTKLPQQVVHSLVSEAVEIEKEFICESLPVDLIGMN 265 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +QY++ +A+R +G + ++ + NPF WM+ +I + + NFFE +V EY + Sbjct: 266 SRLMQQYIEMVADRLLVSLGYDKIYN-SPNPFDWMN-IISVSGKTNFFEKKVGEYAKANI 323 Query: 122 LK 123 + Sbjct: 324 MS 325 >gi|320164906|gb|EFW41805.1| ribonucleotide reductase m2 polypeptide [Capsaspora owczarzaki ATCC 30864] Length = 352 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + L + ++ +A +E + + +P +G+N Sbjct: 227 RDEGLHCDFACMLFGL-------LNNRPSNADVLAIIKDAVAIEQEFLTDALPVALIGMN 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y++F+A+R +G E +K ENPF +M +I L+ + NFFE RV EYQ+ Sbjct: 280 GGLMKTYIEFVADRLLVALGQEKHYK-VENPFDFMD-LISLQGKTNFFERRVGEYQKPGV 337 Query: 122 LK 123 + Sbjct: 338 MS 339 >gi|281200507|gb|EFA74725.1| ribonucleotide reductase small subunit [Polysphondylium pallidum PN500] Length = 335 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +++ K T++ +A E + E++P +G+N Sbjct: 201 RDEGLHCDFACLLYQKLQ-------NKLDNNTIETIIRDAVACEKEFITESLPVDLIGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + S QY++F A+R +G + ++ + NPF WM E+I L+++ NFFE +V+EYQ+ Sbjct: 254 SRSMSQYIEFCADRLLLSLGYKKIYN-SSNPFDWM-EMISLQRKTNFFEGKVSEYQKSGV 311 Query: 122 LK 123 K Sbjct: 312 AK 313 >gi|68069763|ref|XP_676793.1| ribonucleotide reductase small subunit [Plasmodium berghei strain ANKA] gi|56496646|emb|CAI04349.1| ribonucleotide reductase small subunit, putative [Plasmodium berghei] Length = 158 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 69/121 (57%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ + P + + ++ EA +E ++ E++P +G+N Sbjct: 33 RDEGLHTDFNCLIYSLLENKLPE-------EVVQNIVKEAVEVERSFICESLPCDLIGMN 85 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G +F +++NPF WM +I L+ + NFFE RV +YQ+ Sbjct: 86 SRLMSQYIEFVADRLLECLGCSKVF-HSKNPFNWMD-LISLQGKTNFFEKRVADYQKSGV 143 Query: 122 L 122 + Sbjct: 144 M 144 >gi|254586079|ref|XP_002498607.1| ZYRO0G14388p [Zygosaccharomyces rouxii] gi|238941501|emb|CAR29674.1| ZYRO0G14388p [Zygosaccharomyces rouxii] Length = 412 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL + ++ EA +E Y + +P +G+N Sbjct: 284 RDEGLHTDFACLLF-------AHLKNRPSPDIVERIITEAVSIEKRYFEDALPVALLGMN 336 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G E + T NPF +M E I L + NFFE RV++YQ+ Sbjct: 337 AALMNQYVEFVADRLLVALGNEKYYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 394 Query: 122 LK 123 + Sbjct: 395 MS 396 >gi|164659270|ref|XP_001730759.1| hypothetical protein MGL_1758 [Malassezia globosa CBS 7966] gi|159104657|gb|EDP43545.1| hypothetical protein MGL_1758 [Malassezia globosa CBS 7966] Length = 397 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 9/124 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +K + ++ EA +E + + +P +G+N Sbjct: 266 RDEGLHTDFACLLFSHLKK-------RAHPDTVNRIITEAVDIEQDFLTDALPVSLIGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G + + NPF +M E I L+ + NFFE RV +Y + Sbjct: 319 ARLMCQYIEFVADRLLVALGNPKHYN-STNPFDFM-ENISLQGKSNFFERRVGDYAKAGV 376 Query: 122 LKWD 125 + D Sbjct: 377 ARAD 380 >gi|160942848|ref|ZP_02090088.1| hypothetical protein FAEPRAM212_00325 [Faecalibacterium prausnitzii M21/2] gi|158445900|gb|EDP22903.1| hypothetical protein FAEPRAM212_00325 [Faecalibacterium prausnitzii M21/2] Length = 347 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I +++ E P L+T E Q R M+ E EIA+ H + GLN Sbjct: 219 RDENTHLWLFRNIITELQKEQPELFTAESVQALREMMREGVEQEIAWGHYVIGDDIPGLN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y++++ N R +G L+ E W+S+ D + +FFE R T Y Sbjct: 279 RQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVKTDFFEARSTAYA 338 Query: 118 QGAELKWD 125 + L D Sbjct: 339 KSTALIDD 346 >gi|195401438|ref|XP_002059320.1| GJ18335 [Drosophila virilis] gi|194142326|gb|EDW58732.1| GJ18335 [Drosophila virilis] Length = 394 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +++ ++ +A +E + + +P +G+N Sbjct: 269 RDEGLHCDFAVLMFQ-------HLVQRPCRERIIEIISDAVTIEQEFLTDALPVNLIGMN 321 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +Y++F+A+R ++G+ L+ T+NPF +M E+I L + NFFE +V EYQ+ Sbjct: 322 CALMSEYIEFVADRLLVELGVGKLYN-TKNPFTFM-EMISLDGKTNFFEKKVGEYQRMGV 379 Query: 122 LK 123 Sbjct: 380 TS 381 >gi|15232077|ref|NP_189342.1| TSO2 (TSO meaning 'ugly' in Chinese); oxidoreductase/ ribonucleoside-diphosphate reductase/ transition metal ion binding [Arabidopsis thaliana] gi|75273949|sp|Q9LSD0|RIR2C_ARATH RecName: Full=Ribonucleoside-diphosphate reductase small chain C; AltName: Full=Ribonucleoside-diphosphate reductase TSO2 subunit; AltName: Full=Ribonucleotide reductase small subunit C gi|9279629|dbj|BAB01087.1| ribonucleotide reductase [Arabidopsis thaliana] gi|17380726|gb|AAL36193.1| putative ribonucleotide reductase small subunit [Arabidopsis thaliana] gi|21436297|gb|AAM51287.1| putative ribonucleotide reductase small subunit [Arabidopsis thaliana] gi|332643740|gb|AEE77261.1| Ribonucleoside-diphosphate reductase small chain C [Arabidopsis thaliana] Length = 332 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + L TK +++ ++++ +A +E + + +P VG+N Sbjct: 201 RDEGLHCDFAC-------LLYTLLKTKLSEERVKSIVCDAVEIEREFVCDALPCALVGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G ++ T NPF WM E+I L+ + NFFE RV +YQ+ + Sbjct: 254 RDLMSQYIEFVADRLLGALGYGKVYGVT-NPFDWM-ELISLQGKTNFFEKRVGDYQKASV 311 Query: 122 LK 123 + Sbjct: 312 MS 313 >gi|294877483|ref|XP_002768004.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus ATCC 50983] gi|239870142|gb|EER00722.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus ATCC 50983] Length = 247 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 35/112 (31%), Positives = 63/112 (56%), Gaps = 8/112 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +FG + N +K +T+ +++ ++ A +E + + +P G +G+N Sbjct: 120 RDEGLHTDFGCLLYNMLK------FTRLPEERVEDIVRSAVNVEREFITDALPVGLIGMN 173 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 113 A +Y++F+A+R +G ++ NPF WM+ +I L+ + NFFE RV Sbjct: 174 AELMGRYIEFVADRLLVALGYAKIYNSA-NPFDWMT-MISLQGKTNFFEKRV 223 >gi|313115920|ref|ZP_07801347.1| ribonucleoside-diphosphate reductase, beta subunit [Faecalibacterium cf. prausnitzii KLE1255] gi|310621684|gb|EFQ05212.1| ribonucleoside-diphosphate reductase, beta subunit [Faecalibacterium cf. prausnitzii KLE1255] Length = 347 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I +++ E P L+T E Q R M+ E EIA+ H + GLN Sbjct: 219 RDENTHLWLFRNIITELQKEQPELFTAESVQALREMMREGVEQEIAWGHYVIGDDIPGLN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y++++ N R +G L+ E W+S+ D + +FFE R T Y Sbjct: 279 RQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVKTDFFEARSTAYA 338 Query: 118 QGAELKWD 125 + L D Sbjct: 339 KSTALIDD 346 >gi|295103295|emb|CBL00839.1| Ribonucleotide reductase, beta subunit [Faecalibacterium prausnitzii SL3/3] Length = 347 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I +++ E P L+T E Q R M+ E EIA+ H + GLN Sbjct: 219 RDENTHLWLFRNIITELQKEQPELFTAESVQALREMMREGVEQEIAWGHYVIGDDIPGLN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y++++ N R +G L+ E W+S+ D + +FFE R T Y Sbjct: 279 RQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVKTDFFEARSTAYA 338 Query: 118 QGAELKWD 125 + L D Sbjct: 339 KSTALIDD 346 >gi|18311342|ref|NP_563276.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium perfringens str. 13] gi|110801267|ref|YP_697050.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium perfringens ATCC 13124] gi|168205189|ref|ZP_02631194.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium perfringens E str. JGS1987] gi|168210336|ref|ZP_02635961.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium perfringens B str. ATCC 3626] gi|168213271|ref|ZP_02638896.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium perfringens CPE str. F4969] gi|168216675|ref|ZP_02642300.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium perfringens NCTC 8239] gi|169347055|ref|ZP_02865997.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium perfringens C str. JGS1495] gi|182625797|ref|ZP_02953564.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium perfringens D str. JGS1721] gi|18146026|dbj|BAB82066.1| ribonucleoside-diphosphate reductase beta subunit [Clostridium perfringens str. 13] gi|110675914|gb|ABG84901.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium perfringens ATCC 13124] gi|169296738|gb|EDS78867.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium perfringens C str. JGS1495] gi|170663363|gb|EDT16046.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium perfringens E str. JGS1987] gi|170711548|gb|EDT23730.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium perfringens B str. ATCC 3626] gi|170715235|gb|EDT27417.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium perfringens CPE str. F4969] gi|177908953|gb|EDT71440.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium perfringens D str. JGS1721] gi|182381151|gb|EDT78630.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium perfringens NCTC 8239] Length = 344 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I ++K E P ++TKE +++ R M+ EIA+ H + G+N Sbjct: 218 RDENTHLWLFRSIIKELKEEIPEVFTKELKEELREMVRTGVEHEIAWGHYVIGDNVTGIN 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119 E+Y+++I N R IGLEPLF+ Y ENP PW+ D + + +FFE + T Y + Sbjct: 278 KNLIERYIKYIGNLRVKAIGLEPLFEGYNENPAPWVDYYADANQVKTDFFEAKSTAYAKA 337 Query: 120 AELKWD 125 L D Sbjct: 338 GALIDD 343 >gi|312130971|ref|YP_003998311.1| ribonucleoside-diphosphate reductase [Leadbetterella byssophila DSM 17132] gi|311907517|gb|ADQ17958.1| Ribonucleoside-diphosphate reductase [Leadbetterella byssophila DSM 17132] Length = 328 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 8/120 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + + K +++ T++ +A +E + + +P +G+N Sbjct: 202 RDEGLHRDFACLLYTKY------IVNKLPEEQVYTIIKDAVEIEKEFVSDALPVSLIGMN 255 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 AP QY++F+A+ + L+ ++ T NPF +M +I L+ + NFFE RV EYQ+ Sbjct: 256 APQMCQYIEFVADHLLESLNLKKVYNAT-NPFDFMD-LISLQGKTNFFEKRVGEYQKAGV 313 >gi|18640102|ref|NP_570176.1| SPV016 ribonucleotide reductase, small subunit [Swinepox virus] gi|18448509|gb|AAL69755.1| SPV016 ribonucleotide reductase, small subunit [Swinepox virus] Length = 320 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ +++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSKEVITSIIIDAVNIEKEFLTVAIPVDLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R ++G E +F NPF +M E I L+ + NFFE RV+EYQ+ Sbjct: 248 CCLMSQYIEFVADRLLTELGCEKVFN-VYNPFSFM-EYISLEGKTNFFERRVSEYQKMGV 305 Query: 122 LK 123 Sbjct: 306 FT 307 >gi|50286273|ref|XP_445565.1| hypothetical protein [Candida glabrata CBS 138] gi|49524870|emb|CAG58476.1| unnamed protein product [Candida glabrata] Length = 400 Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K + ++ EA +E Y + +P +G+N Sbjct: 271 RDEGLHTDFACLLF-------AHLNHKPDPEVVERIVTEAVEIEQRYFLDALPVALLGMN 323 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R G + ++ ENPF +M E I L + NFFE RV++YQ+ Sbjct: 324 AQLMNQYVEFVADRLLVAFGNKKVYN-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381 Query: 122 LK 123 + Sbjct: 382 MS 383 >gi|320580024|gb|EFW94247.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR) complex [Pichia angusta DL-1] Length = 408 Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL ++ EA +E Y + +P +G+N Sbjct: 277 RDEGLHTDFACLLFS-------HLNNTPNNDIVLKIITEAVDIEKRYFTDALPVNLLGMN 329 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G + + T NPF +M E I L + NFFE RV++YQ+ Sbjct: 330 CSLMCQYVEFVADRLLLSLGCKKHYNAT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 387 Query: 122 L 122 + Sbjct: 388 M 388 >gi|297818266|ref|XP_002877016.1| hypothetical protein ARALYDRAFT_484491 [Arabidopsis lyrata subsp. lyrata] gi|297322854|gb|EFH53275.1| hypothetical protein ARALYDRAFT_484491 [Arabidopsis lyrata subsp. lyrata] Length = 329 Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + L TK +++ ++++ +A +E + + +P VG+N Sbjct: 198 RDEGLHCDFAC-------LLYTLLKTKLSEERVKSIVCDAVEIEREFVCDALPCALVGMN 250 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G ++ T NPF WM E+I L+ + NFFE RV +YQ+ + Sbjct: 251 RDLMSQYIEFVADRLLGALGYGKVYGVT-NPFDWM-ELISLQGKTNFFEKRVGDYQKASV 308 Query: 122 LK 123 + Sbjct: 309 MS 310 >gi|296536499|ref|ZP_06898590.1| ribonucleotide-diphosphate reductase subunit beta [Roseomonas cervicalis ATCC 49957] gi|296263178|gb|EFH09712.1| ribonucleotide-diphosphate reductase subunit beta [Roseomonas cervicalis ATCC 49957] Length = 343 Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59 +RDE+LH I + ENP +WT++ + + E A+ G G Sbjct: 198 VRDETLHCLSVIRLFRTFIQENPEIWTEQLKADLVEICTTIVEHEDAFIDLAFELGGVQG 257 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + +QY++FIA+RR Q+GLEP + +NP PW+ E+++ + NFFE R TEY + Sbjct: 258 MEPEDVKQYIRFIADRRLQQLGLEPHYGTEKNPLPWLDEILNAVEHMNFFEGRATEYSKA 317 Query: 120 A-ELKWD 125 + W+ Sbjct: 318 STAGTWE 324 >gi|294659365|ref|XP_461732.2| DEHA2G04268p [Debaryomyces hansenii CBS767] gi|199433907|emb|CAG90185.2| DEHA2G04268p [Debaryomyces hansenii] Length = 426 Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + ++ EA +E + + +P +G+N Sbjct: 297 RDEGLHTDFACLLFS-------HLQNRPDAVIVERIITEAVTIEKEFFVDALPISLLGMN 349 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G + ++ T NPF +M E I L + NFFE RV++YQ+ Sbjct: 350 CNLMCQYVEFVADRLLVALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 407 Query: 122 L 122 + Sbjct: 408 M 408 >gi|171913278|ref|ZP_02928748.1| ribonucleotide-diphosphate reductase subunit beta [Verrucomicrobium spinosum DSM 4136] Length = 361 Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 48/122 (39%), Positives = 74/122 (60%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES H+ ++ + ENP +WT EF+++ ++ EA LE + + +P VGL Sbjct: 232 LRDESNHIKVFRNLFMDLIDENPEIWTPEFREELVELMKEAVALEKEFIRDCLPVAAVGL 291 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A E Y+ FIA+RR +GL L NP PW++E+ D++KE+NFFE VT+YQ+ + Sbjct: 292 TAGEFELYIDFIADRRLASVGLPALTPGIVNPLPWLAEMQDIRKEQNFFEGTVTDYQKAS 351 Query: 121 EL 122 L Sbjct: 352 SL 353 >gi|148912897|ref|YP_001293211.1| hypothetical protein GTPV_gp017 [Goatpox virus Pellor] Length = 321 Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +K + +++EA +E + +P +G+N Sbjct: 196 RDEGLHCDFACLIFKHLKY-------PPSNDIIKIIINEAVSIEKEFLTNIIPVKLIGMN 248 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++FIA+R ++G + +F + NPF +M E I L+ + NFFE RV+EYQ+ Sbjct: 249 CDLMSQYIEFIADRLLLELGCDKVF-MSTNPFDFM-ENISLEGKTNFFEKRVSEYQKMGV 306 Query: 122 LK 123 + Sbjct: 307 IS 308 >gi|225320685|dbj|BAH29738.1| ribonucleoside-diphosphate reductase subunit M2 [Dicyema japonicum] Length = 337 Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats. Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +K + P + + ++ EA +LE + E +P +G+N Sbjct: 209 RDEGLHTDFACLLYHHLKKKLP-------RDRILQIITEAVVLEKEFLTEALPVALIGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R ++G + + Y +NPF +M E I L + NFFE RV EYQ+ Sbjct: 262 VNLMSQYIEFVADRLIIELGYDKHY-YAQNPFDFM-ENISLSGKTNFFEKRVGEYQRMGV 319 Query: 122 L 122 + Sbjct: 320 M 320 >gi|312075738|ref|XP_003140550.1| ribonucleotide reductase M2 B [Loa loa] gi|307764288|gb|EFO23522.1| ribonucleotide reductase M2 B [Loa loa] Length = 350 Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + IK K +++ ++ EA +E Y E +P +G+N Sbjct: 225 RDEGLHRDFACLLYTYIK-------NKPSEERIYQIIREAVDIEKEYLTEALPVDLIGIN 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++++A+ ++ ++ Y++NPF +M E I ++ + NFFE RV+EYQ+ Sbjct: 278 CKLMCQYIEYVADHLLTELHCAKMY-YSDNPFDFM-ERISIEAKTNFFEKRVSEYQKAGV 335 Query: 122 L 122 L Sbjct: 336 L 336 >gi|321263777|ref|XP_003196606.1| ribonucleoside-diphosphate reductase [Cryptococcus gattii WM276] gi|317463083|gb|ADV24819.1| Ribonucleoside-diphosphate reductase, putative [Cryptococcus gattii WM276] Length = 401 Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats. Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 9/120 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++ PH T ++ EA +E + + +P +G+N Sbjct: 269 RDEGLHTDFACLLFTHLR-RRPHPDT------IARIIKEAVSIEQEFLTDALPVSLIGMN 321 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G E ++ + NPF +M E+I L+ + NFFE+RV+ Y + Sbjct: 322 AKLMCQYIEFVADRLLVALGNEKIWN-STNPFDFM-EMISLQGKANFFESRVSAYSKSGV 379 >gi|324509007|gb|ADY43795.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum] Length = 337 Score = 153 bits (388), Expect = 7e-36, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + IK K Q++ ++ EA LE Y E +P +G+N Sbjct: 212 RDEGLHRDFACLLYKYIKH-------KPSQEQVYEIIKEAVSLEQEYLTEALPVDLIGMN 264 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++++A+ ++G ++ NPF +M E + ++ + NFFE RV+EYQ+ Sbjct: 265 CRLMSQYIEYVADHLLTELGYPKVYN-ASNPFDFM-ENLSIEAKTNFFERRVSEYQRAGV 322 Query: 122 LK 123 L Sbjct: 323 LS 324 >gi|211956300|ref|YP_002302368.1| ribonucleotide reductase small subunit [Deerpox virus W-1170-84] gi|115503095|gb|ABI99013.1| ribonucleotide reductase small subunit [Deerpox virus W-1170-84] Length = 321 Score = 153 bits (388), Expect = 8e-36, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + Q+ + ++ EA +E ++ +P +G+N Sbjct: 196 RDEGLHCDFACLMFKQLLH-------PPNPSRIINIIVEAVSIEKSFLTTALPVKLIGMN 248 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R ++G +FK +ENPF +M E I L+ + NFFE RV++YQ+ Sbjct: 249 CELMCQYIEFVADRLLSELGCTKIFK-SENPFDFM-ESISLEGKTNFFEKRVSDYQKMGI 306 Query: 122 LK 123 + Sbjct: 307 MS 308 >gi|15896521|ref|NP_349870.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium acetobutylicum ATCC 824] gi|15026352|gb|AAK81210.1|AE007823_4 Ribonucleotide reductase beta subunit [Clostridium acetobutylicum ATCC 824] gi|325510679|gb|ADZ22315.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium acetobutylicum EA 2018] Length = 344 Score = 153 bits (388), Expect = 8e-36, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 68/126 (53%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I +++ E P ++T+E +++ + M+ EI + H + G+N Sbjct: 218 RDENTHLWLFRNIIKELQKEEPDMFTEEIKKELKDMVKTGVENEITWGHYVIGDNIQGIN 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119 E Y++++ NRR IG EP+++ Y ENP W+ D + +FFE + T Y + Sbjct: 278 KKLIEDYIKYLGNRRLEAIGFEPIYEGYDENPALWVDIYADANSVKTDFFEAKSTAYAKA 337 Query: 120 AELKWD 125 + L D Sbjct: 338 STLVDD 343 >gi|290995765|ref|XP_002680453.1| predicted protein [Naegleria gruberi] gi|284094074|gb|EFC47709.1| predicted protein [Naegleria gruberi] Length = 338 Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 69/122 (56%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +K +TK QQ ++++EA +E + E++P +G+N Sbjct: 212 RDEGLHTDFACLLYSTLK------YTKLPQQVVHSLVYEAVEIEKEFISESLPVDLIGMN 265 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +QY++ +A+R IG E ++ + NPF WM+ +I + + NFFE +V EY + Sbjct: 266 SRLMQQYIEMVADRLLVSIGYEKIYN-SSNPFDWMN-IISVSGKTNFFEKKVGEYAKANI 323 Query: 122 LK 123 + Sbjct: 324 MS 325 >gi|156847978|ref|XP_001646872.1| hypothetical protein Kpol_2002p85 [Vanderwaltozyma polyspora DSM 70294] gi|156117553|gb|EDO19014.1| hypothetical protein Kpol_2002p85 [Vanderwaltozyma polyspora DSM 70294] Length = 400 Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats. Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + IK K ++ EA +E Y + +P +G+N Sbjct: 270 RDEGLHTDFACLLFSHIK-------NKPDPAIVEKIVTEAVEIEKRYFTDALPVALLGMN 322 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R G E +FK ENPF +M E I L + NFFE RV++YQ+ + Sbjct: 323 ADLMNQYVEFVADRLLVAFGNEKVFK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKASV 380 Query: 122 L 122 + Sbjct: 381 I 381 >gi|45268714|dbj|BAD12266.1| p53-inducible ribonucleotide reductase small subunit 2 short form gamma [Homo sapiens] Length = 139 Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats. Identities = 40/120 (33%), Positives = 68/120 (56%), Gaps = 9/120 (7%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DE LH +F + +L K +++ R ++ +A +E + E +P G +G+N Sbjct: 15 DEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMNC 67 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122 +QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A + Sbjct: 68 ILMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAVM 125 >gi|323453718|gb|EGB09589.1| hypothetical protein AURANDRAFT_60022 [Aureococcus anophagefferens] Length = 393 Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats. Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 7/120 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +++ + ++ ++ EA E+ + + +P VG+N Sbjct: 265 RDEGLHCDFACALYSRLPGHL-----RLSDAEATAIISEAVDTEVDFVTDALPVSLVGMN 319 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A Y++F+A+R +G ++ NPF +M E+I ++ + NFFE RV EYQ+ Sbjct: 320 AKLMTDYVKFVADRLLASLGHPKIYGAA-NPFDFM-ELISMQGKTNFFEKRVAEYQKANV 377 >gi|67585619|ref|XP_665115.1| ribonucleotide reductase R2 subunit [Cryptosporidium hominis TU502] gi|54655552|gb|EAL34885.1| ribonucleotide reductase R2 subunit [Cryptosporidium hominis] Length = 296 Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +K + P + + ++ EA +E + +++P +G+N Sbjct: 171 RDEGLHADFACLIYKALKFKLP-------APRVQQIISEAVEVERNFLCDSLPVDLIGMN 223 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R + + ++ + NPF WM +I L+ + NFFE RV EYQ Sbjct: 224 SRLMAQYIEFVADRLLFALDIPKIYNVS-NPFDWMD-LISLQGKTNFFEKRVGEYQMAGV 281 Query: 122 L 122 + Sbjct: 282 M 282 >gi|21492474|ref|NP_659593.1| Ribonucleotide reductase, small subunit [Sheeppox virus] Length = 321 Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +K + ++ EA +E + +P +G+N Sbjct: 196 RDEGLHCDFACLIFKHLKY-------PPSNEIITIIIKEAVSIEKEFLTNIIPVKLIGMN 248 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++FIA+R ++G + +F + NPF +M E I L+ + NFFE RV+EYQ+ Sbjct: 249 CDLMSQYIEFIADRLLLELGCDKVF-MSINPFDFM-ENISLEGKTNFFEKRVSEYQKMGV 306 Query: 122 LK 123 + Sbjct: 307 IS 308 >gi|190896520|gb|ACE96773.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223 >gi|58260896|ref|XP_567858.1| ribonucleoside-diphosphate reductase [Cryptococcus neoformans var. neoformans JEC21] gi|134116993|ref|XP_772723.1| hypothetical protein CNBK0970 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255341|gb|EAL18076.1| hypothetical protein CNBK0970 [Cryptococcus neoformans var. neoformans B-3501A] gi|57229939|gb|AAW46341.1| ribonucleoside-diphosphate reductase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 401 Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 9/120 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++ PH T ++ EA +E + + +P +G+N Sbjct: 269 RDEGLHTDFACLLFTHLR-RRPHPDT------IARIIKEAVTIEQEFLTDALPVSLIGMN 321 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G E ++ + NPF +M E+I L+ + NFFE+RV+ Y + Sbjct: 322 AKLMCQYIEFVADRLLVAMGNEKIWN-STNPFDFM-EMISLQGKANFFESRVSAYSKSGV 379 >gi|321263951|ref|XP_003196693.1| ribonucleotide reductase small subunit [Cryptococcus gattii WM276] gi|317463170|gb|ADV24906.1| Ribonucleotide reductase small subunit, putative [Cryptococcus gattii WM276] Length = 430 Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 9/120 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + N +K T E ++ EA ++E + + +P +G+N Sbjct: 294 RDEGMHTDFACLLYNHLKHR---CSTDE----VHRIVSEALVIEKQFLTDALPCALIGIN 346 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QYM+F+A+R +G ++ T NPF WM E+I L+ + NFFE+RV+ YQ+ Sbjct: 347 AHLMCQYMEFVADRLVVDLGYPKIYNAT-NPFDWM-ELISLQGKANFFESRVSAYQKANV 404 >gi|297209|emb|CAA48969.1| C8L [Variola virus] gi|745144|prf||2015436AF C8L gene Length = 333 Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 209 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + YM+F+A+R ++G + ++ T NP +M E I L+ + NFFE RV EYQ+ Sbjct: 262 CEMMKTYMEFVADRLISELGFKRIYNVT-NPSDFM-ENISLEGKTNFFEKRVGEYQKMGV 319 Query: 122 LK 123 + Sbjct: 320 MS 321 >gi|190896508|gb|ACE96767.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896514|gb|ACE96770.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896522|gb|ACE96774.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896540|gb|ACE96783.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896542|gb|ACE96784.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223 >gi|190896510|gb|ACE96768.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896556|gb|ACE96791.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896562|gb|ACE96794.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223 >gi|190896546|gb|ACE96786.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223 >gi|302678465|ref|XP_003028915.1| hypothetical protein SCHCODRAFT_83117 [Schizophyllum commune H4-8] gi|300102604|gb|EFI94012.1| hypothetical protein SCHCODRAFT_83117 [Schizophyllum commune H4-8] Length = 331 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 9/120 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + ++ PH R ++ EA +E + + +P +G+N Sbjct: 202 RDEGMHTDFACLLFAHLR-RRPH------PDVVRRIIMEAVTIEQEFLTDALPVSLIGMN 254 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G E ++ T NPF +M +I L+ + NFFE RV++Y+ A Sbjct: 255 STLMCQYIEFVADRLLVALGNEKVYNVT-NPFDFMD-MISLQGKTNFFEKRVSDYKMAAV 312 >gi|297157411|gb|ADI07123.1| ribonucleoside-diphosphate reductase [Streptomyces bingchenggensis BCW-1] Length = 340 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 43/126 (34%), Positives = 76/126 (60%), Gaps = 4/126 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+NF V++ ++ E P L+ E QQ+ ML EA E+ +A + +G G+N Sbjct: 214 RDETMHMNFAFQVVDTVREEEPELFDDELQQQVTDMLREAVEAELQFARDLCGEGLPGMN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119 S QY++ +A++R ++G P++ +ENPF +M E+ ++++ NFFE R + YQ Sbjct: 274 TESMRQYLECVADQRLARLGFAPVY-GSENPFSFM-ELQNVQELTNFFERRASAYQVAVE 331 Query: 120 AELKWD 125 + +D Sbjct: 332 GSVSFD 337 >gi|306478720|ref|NP_042072.2| Ribonucleoside-diphosphate reductase small chain [Variola virus] gi|464615|sp|P33799|RIR2_VAR67 RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit Length = 319 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + YM+F+A+R ++G + ++ T NP +M E I L+ + NFFE RV EYQ+ Sbjct: 248 CEMMKTYMEFVADRLISELGFKRIYNVT-NPSDFM-ENISLEGKTNFFEKRVGEYQKMGV 305 Query: 122 LK 123 + Sbjct: 306 MS 307 >gi|284039889|ref|YP_003389819.1| ribonucleoside-diphosphate reductase [Spirosoma linguale DSM 74] gi|283819182|gb|ADB41020.1| Ribonucleoside-diphosphate reductase [Spirosoma linguale DSM 74] Length = 349 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K + + ++ A +E + + +P +G+N Sbjct: 200 RDEGLHRDFACMLY------TDHIVNKLPESQIYDIIRNAVEIEQEFVADALPVSLIGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A +QY+ F+A+ +GL ++ NPF +M +I L+ + NFFE RV EYQ+G Sbjct: 254 AELMKQYIAFVADHLLVTLGLRKMYNVA-NPFDFMD-MISLQGKTNFFEKRVGEYQRGEV 311 Query: 122 LK 123 + Sbjct: 312 MS 313 >gi|544843|gb|AAB29634.1| C8L product [variola virus VAR, India-1967, Peptide, 333 aa] Length = 333 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 209 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + YM+F+A+R ++G + ++ T NP +M E I L+ + NFFE RV EYQ+ Sbjct: 262 CEMMKTYMEFVADRLISELGFKRIYNVT-NPSDFM-ENISLEGKTNFFEKRVGEYQKMGV 319 Query: 122 LK 123 + Sbjct: 320 MS 321 >gi|94986920|ref|YP_594853.1| ribonucleotide reductase, beta subunit [Lawsonia intracellularis PHE/MN1-00] gi|94731169|emb|CAJ54531.1| Ribonucleotide reductase, beta subunit [Lawsonia intracellularis PHE/MN1-00] Length = 333 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 54/125 (43%), Positives = 69/125 (55%), Gaps = 3/125 (2%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE LH FGI VI + E R + E EIAYA+ + + +G Sbjct: 212 LRDEVLHCTFGITVIKGLIEEENITLDP---TAVRQLWDEVEAAEIAYANYILHEPIIGY 268 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA +FIANRR Q+G++ F +N PW+ E +L+KEKNFFETRVTEYQ G Sbjct: 269 NADLHIGQFRFIANRRSRQLGMKEPFPGAKNVLPWLDEQSNLRKEKNFFETRVTEYQTGG 328 Query: 121 ELKWD 125 LKWD Sbjct: 329 GLKWD 333 >gi|296116311|ref|ZP_06834927.1| ribonucleotide-diphosphate reductase subunit beta [Gluconacetobacter hansenii ATCC 23769] gi|295977130|gb|EFG83892.1| ribonucleotide-diphosphate reductase subunit beta [Gluconacetobacter hansenii ATCC 23769] Length = 334 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 1/122 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH + ENP +WT++ Q R + + E A+ + G G Sbjct: 204 VRDETLHCVSMARLFRVFVQENPEIWTQKLQDDIRQICRDIVEHEDAFIDLSFEMGPVEG 263 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L+A ++Y++F+ANRR Q+GL+ L+ NP PW+ E+++ + NFFE R TEY + Sbjct: 264 LDAAQVKRYIRFVANRRLGQLGLDGLYDVATNPLPWVDEMVNAVEHANFFENRSTEYSRA 323 Query: 120 AE 121 A Sbjct: 324 AT 325 >gi|58260834|ref|XP_567827.1| ribonucleotide reductase small subunit [Cryptococcus neoformans var. neoformans JEC21] gi|134117207|ref|XP_772830.1| hypothetical protein CNBK2010 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255448|gb|EAL18183.1| hypothetical protein CNBK2010 [Cryptococcus neoformans var. neoformans B-3501A] gi|57229908|gb|AAW46310.1| ribonucleotide reductase small subunit, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 430 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 9/120 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + N +K T E ++ EA ++E + + +P +G+N Sbjct: 294 RDEGMHTDFACLLYNHLKHR---CSTDE----VHHIVSEALVIEKQFLTDALPCALIGIN 346 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QYM+F+A+R +G ++ T NPF WM E+I L+ + NFFE+RV+ YQ+ Sbjct: 347 AHLMCQYMEFVADRLVVDLGYPKIYNAT-NPFDWM-ELISLQGKANFFESRVSAYQKANV 404 >gi|190570498|ref|YP_001974856.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019257|ref|ZP_03335064.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190356770|emb|CAQ54129.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995366|gb|EEB56007.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 329 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 44/126 (34%), Positives = 70/126 (55%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60 RDE+LH N I++ N EN +W EF+++ + LE + G GL Sbjct: 193 RDETLHTNSIINLFNTFIKENNEIWNDEFKEELYSACRTIVELEDEFISLAFDLGDVEGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A Y+++IANRR Q+GL+ ++ +NP PW+ E+++ + NFFE RVTEY + A Sbjct: 253 SAEEVRNYIRYIANRRLTQLGLKSIYNVKDNPIPWLDEILNGVEHTNFFENRVTEYSRAA 312 Query: 121 -ELKWD 125 + W+ Sbjct: 313 TQGTWE 318 >gi|209877302|ref|XP_002140093.1| ribonucleotide-diphosphate reductase, small subunit [Cryptosporidium muris RN66] gi|209555699|gb|EEA05744.1| ribonucleotide-diphosphate reductase, small subunit, putative [Cryptosporidium muris RN66] Length = 346 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +FG + + P+ + + ++ EA +E A+ +++P +G+N Sbjct: 221 RDEGIHADFGCLLYKTLNNRLPYG-------RVQEIIAEAVEVERAFLCDSLPVDLIGMN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R + + ++ T NPF WM +I L+ + NFFE RV EYQ Sbjct: 274 SRLMAQYIEFVADRLLFALDVPKIYNVT-NPFDWMD-LISLQGKTNFFEKRVAEYQMAGV 331 Query: 122 L 122 + Sbjct: 332 M 332 >gi|190896516|gb|ACE96771.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223 >gi|332031690|gb|EGI71130.1| Ribonucleoside-diphosphate reductase subunit M2 [Acromyrmex echinatior] Length = 210 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 33/124 (26%), Positives = 65/124 (52%), Gaps = 9/124 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K ++ ++++ +A +E + + +P +G+N Sbjct: 81 RDEGLHCDFACLMFK-------HIVQKPSFERVKSIVMDAVEIEKEFLTQALPVELIGMN 133 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 Y++F+A+R +G E ++ +ENPF +M I + + NFFE +V EY++ Sbjct: 134 RTFMCNYIEFVADRLFVALGFEKVYN-SENPFSFMD-FISMMGKTNFFEKKVGEYKKFGV 191 Query: 122 LKWD 125 ++ D Sbjct: 192 MEED 195 >gi|190896564|gb|ACE96795.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223 >gi|146298285|ref|YP_001192876.1| ribonucleoside-diphosphate reductase [Flavobacterium johnsoniae UW101] gi|146152703|gb|ABQ03557.1| Ribonucleoside-diphosphate reductase [Flavobacterium johnsoniae UW101] Length = 325 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 39/124 (31%), Positives = 70/124 (56%), Gaps = 8/124 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + N HL K +++ + ++ +A +E + E++P +G+N Sbjct: 198 RDEGVHCDFAVHLHNH------HLVNKVPKERIKEIIVDALDIERQFVTESLPVSLIGMN 251 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R ++G E ++ NPF +M +I L+ + NFFE RV EYQ+ Sbjct: 252 AGLMTQYLEFVADRLLVELGCERVYGSA-NPFDFMD-MISLQGKTNFFEKRVAEYQKSGV 309 Query: 122 LKWD 125 + D Sbjct: 310 MNTD 313 >gi|190896552|gb|ACE96789.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223 >gi|13876672|gb|AAK43560.1| ribonucleoside reductase [lumpy skin disease virus] Length = 321 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +K +++EA +E + +P +G+N Sbjct: 196 RDEGLHCDFACLIFKHLKY-------PPSNDIITIIINEAVSIEKEFLTNIIPVKLIGMN 248 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++FIA+R ++G + +F + NPF +M E I L+ + NFFE RV+EYQ+ Sbjct: 249 CVLMSQYIEFIADRLLLELGCDKVF-MSTNPFDFM-ENISLEGKTNFFEKRVSEYQKMGV 306 Query: 122 LK 123 + Sbjct: 307 IS 308 >gi|62637405|ref|YP_227403.1| Ribonucleotide reductase small subunit [Deerpox virus W-848-83] gi|115503265|gb|ABI99183.1| ribonucleotide reductase small subunit [Deerpox virus W-848-83] Length = 321 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + Q+ + ++ EA +E ++ + +P +G+N Sbjct: 196 RDEGLHCDFACLMFKQLLY-------PPSTSRIINIIVEAVSIEKSFLTKALPVKLIGMN 248 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R ++G +FK +ENPF +M E I L+ + NFFE RV++YQ+ Sbjct: 249 CELMCQYIEFVADRLLSELGCNKIFK-SENPFDFM-ESISLEGKTNFFEKRVSDYQKMGI 306 Query: 122 LK 123 + Sbjct: 307 MS 308 >gi|22595713|gb|AAN02745.1| ribonucleotide reductase small subunit [lumpy skin disease virus] Length = 321 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +K +++EA +E + +P +G+N Sbjct: 196 RDEGLHCDFACLIFKHLKY-------PPSNDIITIIINEAVSIEKEFLTNIIPVKLIGMN 248 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++FIA+R ++G + +F + NPF +M E I L+ + NFFE RV+EYQ+ Sbjct: 249 CVLMSQYIEFIADRLLLELGCDKVF-MSTNPFDFM-ENISLEGKTNFFEKRVSEYQKMGV 306 Query: 122 LK 123 + Sbjct: 307 IS 308 >gi|266623614|ref|ZP_06116549.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium hathewayi DSM 13479] gi|288864591|gb|EFC96889.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium hathewayi DSM 13479] Length = 346 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L+T + R M+ E EIA+ H + GL Sbjct: 219 RDENTHLWLFRNMILELKNEEPELFTPDRVDVYREMIKEGCRQEIAWGHYAIGDKVPGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y+Q++ N RC +G EP+++ E W+S+ + + +FFE R T Y Sbjct: 279 KDMITDYIQYLGNLRCMSLGFEPIYEGHEKEPESMAWVSQYSNANMIKTDFFEARSTAYA 338 Query: 118 QGAELKWD 125 + + L D Sbjct: 339 KSSALVDD 346 >gi|257456224|ref|ZP_05621421.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema vincentii ATCC 35580] gi|257446310|gb|EEV21356.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema vincentii ATCC 35580] Length = 351 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I++++ E P L+T E + R+M+ E EIA+ H + GL Sbjct: 223 RDENTHLWLFRSIIHELQKEEPQLFTPENNELFRSMIREGCEQEIAWGHYVIGDDIPGLT 282 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y+Q++ N RC +G EPL++ + E P W+S+ + + +FFE + T Y Sbjct: 283 RGMVTDYIQYLGNLRCENLGFEPLYEGHREEPASMSWVSQYSNANLIKTDFFEAKSTAYA 342 Query: 118 QGAELKWD 125 + + LK D Sbjct: 343 KSSALKDD 350 >gi|195027582|ref|XP_001986661.1| GH20400 [Drosophila grimshawi] gi|193902661|gb|EDW01528.1| GH20400 [Drosophila grimshawi] Length = 393 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +++ ++ +A +E + + +P +G+N Sbjct: 268 RDEGLHCDFAVMMFQ-------HLVQRPSRERIIEIVSDAVTIEQEFLTDALPVNLIGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +Y++F+A+R ++G+ ++ T+NPF +M E+I L + NFFE +V EYQ+ Sbjct: 321 CALMSEYIEFVADRLLVELGVGKIYN-TKNPFTFM-EMISLDGKTNFFEKKVGEYQRMGV 378 Query: 122 LK 123 Sbjct: 379 TS 380 >gi|302682638|ref|XP_003031000.1| hypothetical protein SCHCODRAFT_57055 [Schizophyllum commune H4-8] gi|300104692|gb|EFI96097.1| hypothetical protein SCHCODRAFT_57055 [Schizophyllum commune H4-8] Length = 362 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 9/120 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F ++ ++ PH + ++ EA +E + + +P +G+N Sbjct: 238 RDEGMHTDFACLLLTHMR-RRPH------PEVIEMIIKEAVAIEKEFLTDALPVSLIGMN 290 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G + ++ T NPF +M +I L+ + NFFE RV++Y+ A Sbjct: 291 ADLMCQYIEFVADRLLVALGNDKVWNAT-NPFDFMD-MISLQGKTNFFEKRVSDYKIAAV 348 >gi|187607401|ref|NP_001119973.1| ribonucleotide reductase M2 B (TP53 inducible) [Xenopus (Silurana) tropicalis] gi|165971068|gb|AAI58191.1| LOC100144925 protein [Xenopus (Silurana) tropicalis] Length = 346 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + + K +++ ++ A +E + E +P +G+N Sbjct: 221 RDEGLHTDFACLMFHYLVK-------KPTEERVTEIIVNAVRIEQEFLTEALPVSLIGMN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y++F+A+R ++G FK ENPF +M E I L+ + NFFE RV+EYQ+ A Sbjct: 274 CTLMKTYIEFVADRLLVELGCSKAFK-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 331 Query: 122 L 122 + Sbjct: 332 M 332 >gi|70936723|ref|XP_739266.1| ribonucleotide reductase small subunit [Plasmodium chabaudi chabaudi] gi|56516136|emb|CAH80811.1| ribonucleotide reductase small subunit, putative [Plasmodium chabaudi chabaudi] Length = 349 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 69/121 (57%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ + P + + ++ EA +E ++ E++P +G+N Sbjct: 224 RDEGLHTDFNCLIYSLLENKLPE-------EVVQNIVKEAVEVERSFICESLPCDLIGMN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G +F +++NPF WM +I L+ + NFFE RV +YQ+ Sbjct: 277 SRLMSQYIEFVADRLLECLGCSKVF-HSKNPFSWMD-LISLQGKTNFFEKRVADYQKSGV 334 Query: 122 L 122 + Sbjct: 335 M 335 >gi|299747484|ref|XP_001837064.2| ribonucleotide reductase small subunit [Coprinopsis cinerea okayama7#130] gi|298407540|gb|EAU84681.2| ribonucleotide reductase small subunit [Coprinopsis cinerea okayama7#130] Length = 379 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 64/120 (53%), Gaps = 9/120 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + ++ PH T ++ EA +E + + +P +G+N Sbjct: 249 RDEGMHTDFACLLFAYLRK-RPHSDT------ILAIVTEAVEIEKEFFSDALPVSLIGMN 301 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G + + + +NPF +M E+I ++ + NFFE RV++Y + Sbjct: 302 SSLMNQYIEFVADRLLTSLGNDKHY-HVDNPFDFM-ELISMEGKANFFEKRVSDYAKANV 359 >gi|190896532|gb|ACE96779.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896554|gb|ACE96790.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223 >gi|88861512|ref|ZP_01136127.1| ribonucleotide-diphosphate reductase beta subunit [Pseudoalteromonas tunicata D2] gi|88816487|gb|EAR26327.1| ribonucleotide-diphosphate reductase beta subunit [Pseudoalteromonas tunicata D2] Length = 219 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 1/122 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH N I + + ENP +WT +++ E A+ G G Sbjct: 89 VRDETLHCNSMIRIFKEFIKENPEIWTPTLKKELYEACRIIVEHEDAFIDLAFEMGPMEG 148 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A + Y++FIANRR Q+GLEP++ +NP W+ +++ + NFFE R TEY + Sbjct: 149 LTAQEVKDYIRFIANRRLIQLGLEPIYDVQKNPLTWLDTMLNAVEHMNFFEGRATEYSKA 208 Query: 120 AE 121 + Sbjct: 209 ST 210 >gi|190896550|gb|ACE96788.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223 >gi|190896538|gb|ACE96782.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896548|gb|ACE96787.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896558|gb|ACE96792.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223 >gi|19113338|ref|NP_596546.1| ribonucleotide reductase small subunit Suc22 [Schizosaccharomyces pombe 972h-] gi|9297110|sp|P36603|RIR2_SCHPO RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|3378511|emb|CAA20100.1| ribonucleotide reductase small subunit Suc22 [Schizosaccharomyces pombe] Length = 391 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +K + ++ ++ EA +E Y + +P +G+N Sbjct: 261 RDEGLHTDFACLMFSHLKH-------RPGRKVVEAIIVEAVDIEKEYFTDALPVSLLGMN 313 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G + + T NPF +M E I L + NFFE +V++YQ Sbjct: 314 KDLMCQYIEFVADRLLVALGNDKYYNVT-NPFDFM-ENISLAGKTNFFEKKVSDYQIAGV 371 Query: 122 LK 123 + Sbjct: 372 MS 373 >gi|291276761|ref|YP_003516533.1| ribonucleoside-diphosphate reductase subunit beta [Helicobacter mustelae 12198] gi|290963955|emb|CBG39794.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter mustelae 12198] Length = 344 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I +K E P L+ K+ +++ M A +E A+ +GL Sbjct: 221 RDEVTHLILFQNMIRTLKKERPDLFDKDLEEEIVEMFRRAVEIEAAWGEYITQGQILGLT 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 QY+Q++A++R ++G+ L+ E+P W+ + ++ NFFE +VT Y +G+ Sbjct: 281 GEVIHQYIQYLADQRLSKVGMPKLYN-VEHPIKWVEQYASFNEQRTNFFEAKVTNYAKGS 339 Query: 121 ELKW 124 + Sbjct: 340 LIDD 343 >gi|156102402|ref|XP_001616894.1| ribonucleoside-diphosphate reductase small chain [Plasmodium vivax SaI-1] gi|148805768|gb|EDL47167.1| ribonucleoside-diphosphate reductase small chain, putative [Plasmodium vivax] Length = 349 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 68/121 (56%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ + P + + ++ EA +E ++ E++P +G+N Sbjct: 224 RDEGLHTDFNCLIYSLLENKLPE-------EVVQNIVKEAVEVERSFICESLPCDLIGMN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G +F + +NPF WM +I L+ + NFFE RV +YQ+ Sbjct: 277 SRLMSQYIEFVADRLLECLGSPKIF-HAKNPFNWMD-LISLQGKTNFFEKRVADYQKSGV 334 Query: 122 L 122 + Sbjct: 335 M 335 >gi|190896518|gb|ACE96772.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ Y NPF M E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVY-YVANPFDGM-ELISLQGKTNFFEKRVGEY 223 >gi|32266105|ref|NP_860137.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter hepaticus ATCC 51449] gi|32262154|gb|AAP77203.1| ribonucleoside diphosphate reductase [Helicobacter hepaticus ATCC 51449] Length = 349 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 65/125 (52%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I+ ++ E HL+T +++ M +A +E + +GL Sbjct: 225 RDEVTHLLLFQNMISSLRKEQGHLFTPSLEEEVVEMFKKAVEIESQWGEYITQGQILGLT 284 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120 + +Y+Q++A+ R +GL L+ ++NP W+ + + NFFE +VT Y +G+ Sbjct: 285 SEIIREYIQYLADARLKAVGLPQLY-GSKNPIKWVDQFASFNDQKTNFFEAKVTNYSKGS 343 Query: 121 ELKWD 125 + +D Sbjct: 344 -INFD 347 >gi|163753569|ref|ZP_02160692.1| ribonucleoside-diphosphate reductase 1, beta subunit [Kordia algicida OT-1] gi|161325783|gb|EDP97109.1| ribonucleoside-diphosphate reductase 1, beta subunit [Kordia algicida OT-1] Length = 326 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + N HL K +++ R ++ +A +E + E++P +G+N Sbjct: 199 RDEGVHCDFAVHL------HNNHLVNKVPKERIRAIIVDALNIEREFITESLPVSLIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+ +R ++G E + + NPF +M +I L+ + NFFE RV+EYQ+ Sbjct: 253 AKLMTQYLEFVTDRLLQELGCEKEYNVS-NPFDFMD-MISLQGKTNFFEKRVSEYQKAGV 310 Query: 122 LK 123 L Sbjct: 311 LN 312 >gi|291562343|emb|CBL41159.1| Ribonucleotide reductase, beta subunit [butyrate-producing bacterium SS3/4] Length = 346 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I +++ E P L+T Q R M+ E EIA+ H + GLN Sbjct: 218 RDENTHLWLFRNIITELQKEQPELFTAGSVQALREMMREGVEQEIAWGHYVIGDDIPGLN 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y++++ N R +G L+ E W+S+ D + +FFE R T Y Sbjct: 278 RQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVKTDFFEARSTAYA 337 Query: 118 QGAELKWD 125 + L D Sbjct: 338 KSTALIDD 345 >gi|15826569|pdb|1JK0|A Chain A, Ribonucleotide Reductase Y2y4 Heterodimer Length = 419 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++ EA +E Y + +P +G+N Sbjct: 291 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 343 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R G + +K ENPF +M E I L + NFFE RV++YQ+ Sbjct: 344 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 401 Query: 122 LK 123 + Sbjct: 402 MS 403 >gi|328872436|gb|EGG20803.1| ribonucleotide reductase small subunit [Dictyostelium fasciculatum] Length = 335 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N+ L K + +++ +A E + +++P +G+N Sbjct: 201 RDEGLHCDFACLLYNK-------LNNKLDVKTIESIIRDAVECEKEFVTDSLPVDLIGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +Y++F A+R +G + ++ NPF WM E+I L ++ NFFE +V+EY + Sbjct: 254 SREMSKYIEFCADRLLVSLGYKKIYNSA-NPFDWM-EMISLMRKANFFEGKVSEYAKAGV 311 Query: 122 LK 123 K Sbjct: 312 AK 313 >gi|71024571|ref|XP_762515.1| hypothetical protein UM06368.1 [Ustilago maydis 521] gi|46101992|gb|EAK87225.1| hypothetical protein UM06368.1 [Ustilago maydis 521] Length = 424 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 9/124 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ + ++ EA +E A+ E++P +G+N Sbjct: 289 RDEGLHTDFACLLFSHLRR-------RAHPDTVLKIITEAVEIEKAFLCESIPVALIGMN 341 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++++A+R +G P+ + PF +M+ I L+ + NFFE +V EY + Sbjct: 342 SKLMCQYIEYVADRLLVSLG-NPVHYGSTCPFDFMT-NISLEGKTNFFEKKVAEYAKAGV 399 Query: 122 LKWD 125 + D Sbjct: 400 ARKD 403 >gi|254456975|ref|ZP_05070403.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacterales bacterium GD 1] gi|207085767|gb|EDZ63051.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacterales bacterium GD 1] Length = 340 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 41/125 (32%), Positives = 64/125 (51%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+T + +++ M EA LE + +GL Sbjct: 215 RDEVTHLVLFQNLINTLRKERPDLFTDKLKEEVIAMFKEAVQLESEWGKYITQGQILGLT 274 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120 EQY++F+A+ R +G E L+ T NP W+ + + NFFE VT Y +G+ Sbjct: 275 NDIVEQYIKFLADERLTAVGFEKLYNVT-NPIKWVDDFAKFNDQKTNFFEGTVTNYSKGS 333 Query: 121 ELKWD 125 L +D Sbjct: 334 -LTFD 337 >gi|313683656|ref|YP_004061394.1| ribonucleotide reductase [Sulfuricurvum kujiense DSM 16994] gi|313156516|gb|ADR35194.1| ribonucleotide reductase [Sulfuricurvum kujiense DSM 16994] Length = 339 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 40/125 (32%), Positives = 67/125 (53%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T+E ++ M +A LE A+ +GL Sbjct: 215 RDEVTHLVLFQNIINTLRRERSDLFTEELIEEVYDMFRKAVELETAWGKYITQGQILGLT 274 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120 EQY+Q++A++R +GL+PL+ + +P W+ + + NFFE VT Y +G+ Sbjct: 275 NEIVEQYIQYLADQRLTAVGLKPLYNVS-HPIKWVDDFSKFNDQKTNFFEGTVTNYSKGS 333 Query: 121 ELKWD 125 L +D Sbjct: 334 -LSFD 337 >gi|167760514|ref|ZP_02432641.1| hypothetical protein CLOSCI_02888 [Clostridium scindens ATCC 35704] gi|167661880|gb|EDS06010.1| hypothetical protein CLOSCI_02888 [Clostridium scindens ATCC 35704] Length = 347 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +++ ++K E P L+T+ ++ R M+ E EI++ H + GLN Sbjct: 219 RDENTHLWLFRNILLELKKEEPQLFTESRIEEYREMIKEGCQQEISWGHYVIGDDIQGLN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y+Q++ N RC +G P+++ + + P W+S+ + + +FFE R T Y Sbjct: 279 RDMVTDYIQYLGNLRCTNLGFAPIYEGHVKEPDSMSWVSQFSNANMIKTDFFEARSTAYA 338 Query: 118 QGAELKWD 125 + + L D Sbjct: 339 KSSALVDD 346 >gi|68485781|ref|XP_713171.1| hypothetical protein CaO19.9424 [Candida albicans SC5314] gi|68485874|ref|XP_713125.1| hypothetical protein CaO19.1868 [Candida albicans SC5314] gi|46434604|gb|EAK94008.1| hypothetical protein CaO19.1868 [Candida albicans SC5314] gi|46434651|gb|EAK94054.1| hypothetical protein CaO19.9424 [Candida albicans SC5314] gi|238883648|gb|EEQ47286.1| ribonucleoside-diphosphate reductase small chain 1 [Candida albicans WO-1] Length = 394 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H ++ + + +K K + ++ EA +E Y + +P +G+N Sbjct: 266 RDEGIHTDYACLLFSYLK-------NKPSSEIIEKIITEAVDIEKEYFSDALPVSLLGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R G + + T NPF +M E I L + NFFE RV++YQ+ Sbjct: 319 CDLMCQYVEFVADRLLVAFGNKKYYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 376 Query: 122 LK 123 ++ Sbjct: 377 ME 378 >gi|162147608|ref|YP_001602069.1| ribonucleotide-diphosphate reductase subunit beta [Gluconacetobacter diazotrophicus PAl 5] gi|209542240|ref|YP_002274469.1| ribonucleotide-diphosphate reductase subunit beta [Gluconacetobacter diazotrophicus PAl 5] gi|161786185|emb|CAP55767.1| putative ribonucleotide reductase small subunit [Gluconacetobacter diazotrophicus PAl 5] gi|209529917|gb|ACI49854.1| Ribonucleoside-diphosphate reductase [Gluconacetobacter diazotrophicus PAl 5] Length = 353 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH + ENP +WT + + + E A+ G G Sbjct: 213 VRDETLHCLSMARLFRVFIQENPEIWTDALRADIVQICRDIVEHEDAFIDLCFEMGPVEG 272 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L+ + Y++FIA+RR + +GL+ ++ NP PW+ ++++ + NFFE R TEY + Sbjct: 273 LDGDLVKTYIRFIADRRLNLLGLDGIYDVPSNPLPWVDDMLNAVEHTNFFENRSTEYSRA 332 Query: 120 A-ELKWD 125 + W+ Sbjct: 333 STTGSWE 339 >gi|307719930|ref|YP_003891070.1| Ribonucleoside-diphosphate reductase [Sulfurimonas autotrophica DSM 16294] gi|306978023|gb|ADN08058.1| Ribonucleoside-diphosphate reductase [Sulfurimonas autotrophica DSM 16294] Length = 340 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+T E + M EA LE + +GL Sbjct: 215 RDEVTHLVLFQNLINTLRKERPDLFTDELRADVIEMFKEAVKLETEWGKYITQGQILGLT 274 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120 EQY+Q++A+ R + +G + L+ + NP W+ + + NFFE VT Y +G+ Sbjct: 275 DEIVEQYIQYLADDRLNSVGFDKLYNVS-NPIKWVDDFAKFNDQKTNFFEGTVTNYSKGS 333 Query: 121 ELKWD 125 L +D Sbjct: 334 -LSFD 337 >gi|331086748|ref|ZP_08335825.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae bacterium 9_1_43BFAA] gi|330409914|gb|EGG89349.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae bacterium 9_1_43BFAA] Length = 347 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 68/128 (53%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +++ +++ E P L+++E +++ R M+ E EIA+ H + GL+ Sbjct: 219 RDENTHLWLFTNILRELRKELPELFSEEKEKEYRQMIREGCEQEIAWGHYVIGDAVSGLS 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y++++ N RC +GL P+++ E W+S+ + + +FFE + T Y Sbjct: 279 CDMITDYVKYLGNLRCKNLGLAPIYEGHEKEPESMGWVSQFSNANMIKTDFFEAKSTAYA 338 Query: 118 QGAELKWD 125 + + L D Sbjct: 339 KSSALVDD 346 >gi|6525234|gb|AAF15363.1|AF205376_1 ribonucleotide reductase R2 subunit [Plasmodium falciparum] Length = 320 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + + + P Q + ++ EA +E ++ E++P +G+N Sbjct: 195 RDEGLHTDFNCLIYSLLDNKLPE-------QMVQNIVKEAVEVERSFICESLPCDLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G +F +++NPF WM +I L+ + NFFE RV +YQ+ Sbjct: 248 SRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWMD-LISLQGKTNFFEKRVADYQKSGV 305 Query: 122 L 122 + Sbjct: 306 M 306 >gi|1710398|sp|P50650|RIR2_PLAF4 RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase R2 subunit; AltName: Full=Ribonucleotide reductase small subunit gi|555613|gb|AAA50170.1| ribonucleotide reductase small subunit [Plasmodium falciparum] Length = 349 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + + + P Q + ++ EA +E ++ E++P +G+N Sbjct: 224 RDEGLHTDFNCLIYSLLDNKLPE-------QIIQNIVKEAVEVERSFICESLPCDLIGMN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G +F +++NPF WM +I L+ + NFFE RV +YQ+ Sbjct: 277 SRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWMD-LISLQGKTNFFEKRVADYQKSGV 334 Query: 122 L 122 + Sbjct: 335 M 335 >gi|170664480|gb|ACB28637.1| small subunit ribonucleotide reductase [Myxoma virus] gi|170664652|gb|ACB28808.1| small subunit ribonucleotide reductase [recombinant virus 6918VP60-T2] Length = 322 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +K +++ +++ EA ++E + E +P +G+N Sbjct: 198 RDEGLHCDFACLMFKHLKH-------TPSEERVASIIKEAVVIEQRFLTEALPVRLIGMN 250 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R ++G +F NPF +M E I L+ + NFFE RV++YQ+ Sbjct: 251 CELMCQYIEFVADRLIAELGYSKIF-SATNPFDFM-ENISLEGKTNFFEKRVSDYQRMGV 308 Query: 122 L 122 + Sbjct: 309 V 309 >gi|9633651|ref|NP_051729.1| ribonucleotide reductase, small subunit [Myxoma virus] gi|6523870|gb|AAF14903.1|AF170726_19 ribonucleotide reductase, small subunit [Myxoma virus] gi|301134541|gb|ADK63655.1| M015L [Myxoma virus] Length = 322 Score = 150 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +K +++ +++ EA ++E + E +P +G+N Sbjct: 198 RDEGLHCDFACLMFKHLKH-------TPSEERVASIIKEAVVIEQRFLTEALPVRLIGMN 250 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R ++G +F NPF +M E I L+ + NFFE RV++YQ+ Sbjct: 251 CELMCQYIEFVADRLIAELGYSKIF-SATNPFDFM-ENISLEGKTNFFEKRVSDYQRMGV 308 Query: 122 L 122 + Sbjct: 309 V 309 >gi|145352915|ref|XP_001420779.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144581014|gb|ABO99072.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 346 Score = 150 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + + ENP ++ ++ +A +E + + + VG+N Sbjct: 220 RDEGLHCDFACLLYSML--ENP-----LSEKVLHQLVGDAVTIEKEFVCDALSCSLVGMN 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A Y++F+A+R Q+G+ L+ NPF WM E+I L+ + NFFE RV +YQ+ Sbjct: 273 ANMMSTYIEFVADRLLLQLGVSKLYNAV-NPFDWM-ELISLQGKANFFEHRVDQYQKAGV 330 Query: 122 L 122 + Sbjct: 331 M 331 >gi|66475262|ref|XP_627447.1| ribonucleotide reductase small subunit, duplicated adjacent gene [Cryptosporidium parvum Iowa II] gi|9652154|gb|AAF91416.1|AF275635_1 ribonucleotide reductase R2 subunit [Cryptosporidium parvum] gi|46228920|gb|EAK89769.1| ribonucleotide reductase small subunit, duplicated adjacent gene [Cryptosporidium parvum Iowa II] Length = 352 Score = 150 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +K + P + + ++ EA +E + +++P +G+N Sbjct: 227 RDEGLHADFACLIYKALKFKLP-------APRVQQIISEAVEVERNFLCDSLPVDLIGMN 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R + + ++ + NPF WM +I L+ + NFFE RV EYQ Sbjct: 280 SRLMAQYIEFVADRLLFALDIPKIYNVS-NPFDWMD-LISLQGKTNFFEKRVGEYQMAGV 337 Query: 122 L 122 + Sbjct: 338 M 338 >gi|190896526|gb|ACE96776.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 223 Score = 150 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ +A +E + + +P VG+N Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 QY++F+A+R +G ++ Y NPF M E+I L+ + NFFE RV EY Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVY-YVANPFDGM-ELISLQGKTNFFEKRVGEY 223 >gi|325663145|ref|ZP_08151595.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae bacterium 4_1_37FAA] gi|325470599|gb|EGC73829.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae bacterium 4_1_37FAA] Length = 347 Score = 150 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 68/128 (53%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +++ +++ E P L+++E +++ R M+ E EIA+ H + GL+ Sbjct: 219 RDENTHLWLFTNILRELRKELPELFSEEKEKEYRQMIREGCEQEIAWGHYVIGDAVSGLS 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y++++ N RC +GL P+++ E W+S+ + + +FFE + T Y Sbjct: 279 CDMITDYVKYLGNLRCKNLGLAPIYEGHEKEPESMGWVSQFSNANMIKTDFFEAKSTAYA 338 Query: 118 QGAELKWD 125 + + L D Sbjct: 339 KSSALVDD 346 >gi|187903099|ref|YP_001883390.1| ribonucleoside diphosphate reductase small subunit, rr2 [Musca domestica salivary gland hypertrophy virus] gi|187384748|gb|ACD03521.1| ribonucleoside diphosphate reductase small subunit, rr2 [Musca domestica salivary gland hypertrophy virus] Length = 343 Score = 150 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 66/122 (54%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + + L + +++ ++ EA +E + + +P +G+N Sbjct: 211 RDEGMHCDFAVLLFKRY------LVNRPSEERVGEIVREAVTIEQEFLTDALPVSLIGMN 264 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G++ ++ T+NPF +M +I L + NFFE RV +YQ+ Sbjct: 265 CGLMSQYIEFVADRLLVDLGMKRIYN-TKNPFDFMD-MISLDGKTNFFEKRVGDYQRLGV 322 Query: 122 LK 123 K Sbjct: 323 AK 324 >gi|6969682|gb|AAF33894.1| TF4L [Vaccinia virus Tian Tan] Length = 319 Score = 150 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE L +F + HL ++ R+++ +A +E + +P +G+N Sbjct: 195 RDEGLRCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 E Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQQ Sbjct: 248 CEMMETYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQQMGV 305 Query: 122 LK 123 + Sbjct: 306 MS 307 >gi|126662515|ref|ZP_01733514.1| ribonucleoside-diphosphate reductase 1, beta subunit [Flavobacteria bacterium BAL38] gi|126625894|gb|EAZ96583.1| ribonucleoside-diphosphate reductase 1, beta subunit [Flavobacteria bacterium BAL38] Length = 325 Score = 150 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 35/124 (28%), Positives = 69/124 (55%), Gaps = 8/124 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + + H+ K +++ ++ +A +E + E++P +G+N Sbjct: 198 RDEGMHCDFAVHLHSH------HIVNKVPKERITEIIVDALNIERQFITESLPVSLIGMN 251 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+ +R ++G + ++ + NPF +M +I L+ + NFFE RV EYQ+ Sbjct: 252 ATLMTQYLEFVTDRLLVELGCDRVYN-SSNPFDFMD-MISLQGKTNFFEKRVAEYQKAGV 309 Query: 122 LKWD 125 + D Sbjct: 310 MNSD 313 >gi|124808087|ref|XP_001348226.1| ribonucleotide reductase small subunit [Plasmodium falciparum 3D7] gi|23497116|gb|AAN36665.1|AE014816_50 ribonucleotide reductase small subunit [Plasmodium falciparum 3D7] Length = 349 Score = 150 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + + + P Q + ++ EA +E ++ E++P +G+N Sbjct: 224 RDEGLHTDFNCLIYSLLDNKLPE-------QMVQNIVKEAVEVERSFICESLPCDLIGMN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G +F +++NPF WM +I L+ + NFFE RV +YQ+ Sbjct: 277 SRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWMD-LISLQGKTNFFEKRVADYQKSGV 334 Query: 122 L 122 + Sbjct: 335 M 335 >gi|268575178|ref|XP_002642568.1| C. briggsae CBR-RNR-2 protein [Caenorhabditis briggsae] gi|187023588|emb|CAP37241.1| CBR-RNR-2 protein [Caenorhabditis briggsae AF16] Length = 365 Score = 150 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 65/121 (53%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K Q++ ++ +A +E + E +P +G+N Sbjct: 240 RDEGLHRDFACLLYSMLQ-------NKLSQERIFEIIRDAVAIEQEFLTEALPVDMIGMN 292 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+ ++G + L+ +NPF +M E I + + NFFE RV+EYQ+ Sbjct: 293 CRLMSQYIEFVADHLLQELGCDKLYN-VKNPFDFM-ENISIDGKTNFFEKRVSEYQRPGV 350 Query: 122 L 122 + Sbjct: 351 M 351 >gi|215401283|ref|YP_002332587.1| ribonucleotide reductase small subunit [Helicoverpa armigera multiple nucleopolyhedrovirus] gi|198448783|gb|ACH88573.1| ribonucleotide reductase small subunit [Helicoverpa armigera multiple nucleopolyhedrovirus] Length = 313 Score = 150 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 8/123 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F N E K + M EA +E + + +P +G+N Sbjct: 191 RDEGMHTDFACLYYNTRVNE------KLSYETILDMFKEAVDIEKEFFTDALPVALLGMN 244 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A +Y++F+A+R Q+G + NPFP+M+ I L+ + NFFE RV EY+ Sbjct: 245 ADMMCEYIEFVADRLLLQLGQPKYYN-ARNPFPFMN-NISLEGKTNFFERRVGEYKMFGT 302 Query: 122 LKW 124 Sbjct: 303 GSD 305 >gi|73852496|ref|YP_293780.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi virus 86] gi|72415212|emb|CAI65449.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi virus 86] Length = 325 Score = 150 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K + ++ A LE + E +P +G+N Sbjct: 196 RDEGLHTDFACMLYRN------HIIHKLPYETVLDIITNAVELERLFICEALPVSLIGIN 249 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A S Y++F+A+R +G + NPF WM E+I L+ + NFFE RV EYQ+ Sbjct: 250 AESMSTYIKFVADRLLISLGYAKHYNVV-NPFEWM-ELISLEGKTNFFEKRVGEYQKAGV 307 Query: 122 LK 123 + Sbjct: 308 MD 309 >gi|86132508|ref|ZP_01051102.1| ribonucleoside-diphosphate reductase small chain [Dokdonia donghaensis MED134] gi|85817069|gb|EAQ38253.1| ribonucleoside-diphosphate reductase small chain [Dokdonia donghaensis MED134] Length = 328 Score = 150 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 36/123 (29%), Positives = 67/123 (54%), Gaps = 8/123 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + N HL K +++ ++ A +E + E++P +G+N Sbjct: 198 RDEGVHCDFAVHLHNH------HLVNKVPKERITEIIVNALDIEREFITESLPVSLIGMN 251 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++++ +R ++ E ++ T NPF +M +I L+ + NFFE RV EYQ+ Sbjct: 252 SNLMTQYLEYVTDRLLTELDCEKVYN-TANPFDFMD-MISLQGKTNFFEKRVGEYQKAGV 309 Query: 122 LKW 124 +K Sbjct: 310 VKD 312 >gi|255080138|ref|XP_002503649.1| predicted protein [Micromonas sp. RCC299] gi|226518916|gb|ACO64907.1| predicted protein [Micromonas sp. RCC299] Length = 324 Score = 150 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +K + + ++ +A +E + + + VG+N Sbjct: 192 RDEGLHCDFACLLYSMLKH-------PLDPARLQEIVKDAVDIEKEFVCDALSCALVGMN 244 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A +Y++F+A+R Q+G+E ++ T NPF WM E+I L+ + NFFE RV +YQ+ Sbjct: 245 ADLMSEYIEFVADRLMTQLGVEKVWN-TPNPFEWM-EMISLQGKANFFEHRVDQYQKANV 302 Query: 122 LK 123 + Sbjct: 303 MT 304 >gi|225164890|ref|ZP_03727109.1| Ribonucleoside-diphosphate reductase [Opitutaceae bacterium TAV2] gi|224800504|gb|EEG18881.1| Ribonucleoside-diphosphate reductase [Opitutaceae bacterium TAV2] Length = 362 Score = 150 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 48/123 (39%), Positives = 76/123 (61%), Gaps = 1/123 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES H+ +++ + ENP +WT F+++ R + EA LE + + +P VGL Sbjct: 232 LRDESNHIEVFRNLLMDLVEENPEIWTPGFKEELRETMREAVTLEKEFIRDCLPVNAVGL 291 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 Y+ +IA+RR +GL P+ +NP PW++E++D+KKE+NFFE RVTEYQ+ Sbjct: 292 AVDEFLTYIDYIADRRLEGVGLAPISATPIKNPLPWLAEMMDIKKEQNFFEGRVTEYQKA 351 Query: 120 AEL 122 + L Sbjct: 352 SSL 354 >gi|22549454|ref|NP_689227.1| putative ribonucleotide reductase small subunit-like protein [Mamestra configurata NPV-B] gi|22476633|gb|AAM95039.1| putative ribonucleotide reductase small subunit-like protein [Mamestra configurata NPV-B] Length = 313 Score = 150 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 8/123 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F N E K + M EA +E + + +P +G+N Sbjct: 191 RDEGMHTDFACLYYNTRVNE------KLSYETILDMFKEAVDIEKEFFTDALPVALLGMN 244 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A +Y++F+A+R Q+G + NPFP+M+ I L+ + NFFE RV EY+ Sbjct: 245 ADMMCEYIEFVADRLLLQLGQPKYYN-ARNPFPFMN-NISLEGKTNFFERRVGEYKMFGT 302 Query: 122 LKW 124 Sbjct: 303 GSD 305 >gi|17551968|ref|NP_497821.1| RiboNucleotide Reductase family member (rnr-2) [Caenorhabditis elegans] gi|1172941|sp|P42170|RIR2_CAEEL RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|3873950|emb|CAA84688.1| C. elegans protein C03C10.3, confirmed by transcript evidence [Caenorhabditis elegans] Length = 381 Score = 150 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++++ K QQ+ ++ +A +E + E +P +G+N Sbjct: 256 RDEGLHRDFACLLYSKLQK-------KLTQQRIYDIIKDAVAIEQEFLTEALPVDMIGMN 308 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+ ++G + L+K ++NPF +M E I + + NFFE RV+EYQ+ Sbjct: 309 CRLMSQYIEFVADHLLVELGCDKLYK-SKNPFDFM-ENISIDGKTNFFEKRVSEYQRPGV 366 Query: 122 L 122 + Sbjct: 367 M 367 >gi|226950223|ref|YP_002805314.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum A2 str. Kyoto] gi|226843961|gb|ACO86627.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum A2 str. Kyoto] Length = 342 Score = 150 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 70/126 (55%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I ++K ENPH++T+E +++ R M+ EI + +GLN Sbjct: 214 RDEVTHLVLFQNIIKELKNENPHIFTEELEEEFRQMMRIGVEHEIQWGQYVTNNEILGLN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119 E+Y+++++N R IGL+PL+ + ++P W+ L + +FFE +VT Y + Sbjct: 274 DELIEKYIKYLSNLRLVAIGLKPLYLEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|254455551|ref|ZP_05068980.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus Pelagibacter sp. HTCC7211] gi|207082553|gb|EDZ59979.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus Pelagibacter sp. HTCC7211] Length = 335 Score = 150 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 1/122 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH N I + + ENP +WT + +++ E A+ G G Sbjct: 205 VRDETLHCNSMIRIFKEFINENPEIWTPKLKKELYEACRTIIAHEDAFIDLAFEMGPMEG 264 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A + Y++FI NRR Q+GLEP++ +NP W+ +++ + NFFE R TEY + Sbjct: 265 LTAQEVKDYIRFIGNRRLTQLGLEPIYDVDKNPLGWLDTMLNAVEHMNFFEGRATEYSKA 324 Query: 120 AE 121 + Sbjct: 325 ST 326 >gi|290771185|emb|CAY80753.2| Rnr2p [Saccharomyces cerevisiae EC1118] Length = 399 Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++ EA +E Y + +P +G+N Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R G + +K ENPF +M E I L + NFFE RV++YQ+ Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381 Query: 122 LK 123 + Sbjct: 382 MS 383 >gi|323347997|gb|EGA82256.1| Rnr2p [Saccharomyces cerevisiae Lalvin QA23] Length = 399 Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++ EA +E Y + +P +G+N Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R G + +K ENPF +M E I L + NFFE RV++YQ+ Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381 Query: 122 LK 123 + Sbjct: 382 MS 383 >gi|6322434|ref|NP_012508.1| Rnr2p [Saccharomyces cerevisiae S288c] gi|1172946|sp|P09938|RIR2_YEAST RecName: Full=Ribonucleoside-diphosphate reductase small chain 1; AltName: Full=Ribonucleotide reductase R2 subunit 1; AltName: Full=Ribonucleotide reductase small subunit 1 gi|52695523|pdb|1SMQ|A Chain A, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer From Saccharomyces Cerevisiae gi|52695524|pdb|1SMQ|B Chain B, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer From Saccharomyces Cerevisiae gi|52695525|pdb|1SMQ|C Chain C, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer From Saccharomyces Cerevisiae gi|52695526|pdb|1SMQ|D Chain D, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer From Saccharomyces Cerevisiae gi|172450|gb|AAA34988.1| ribonucleoside diphosphate reductase small subunit [Saccharomyces cerevisiae] gi|1008142|emb|CAA89317.1| RNR2 [Saccharomyces cerevisiae] gi|285812874|tpg|DAA08772.1| TPA: Rnr2p [Saccharomyces cerevisiae S288c] Length = 399 Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++ EA +E Y + +P +G+N Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R G + +K ENPF +M E I L + NFFE RV++YQ+ Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381 Query: 122 LK 123 + Sbjct: 382 MS 383 >gi|114327552|ref|YP_744709.1| ribonucleotide-diphosphate reductase subunit beta [Granulibacter bethesdensis CGDNIH1] gi|114315726|gb|ABI61786.1| ribonucleoside-diphosphate reductase beta chain [Granulibacter bethesdensis CGDNIH1] Length = 339 Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats. Identities = 43/127 (33%), Positives = 71/127 (55%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH I + + EN +WT++ +Q+ R + E A+ G G Sbjct: 209 VRDETLHCLSIIKLFHVFIDENREIWTEDLRQEIRQICATIVEHEDAFIDLAFELGSVEG 268 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L+A + Y+++IA+RR Q+GLEPLF NP PW+ ++++ + NFFE R TEY + Sbjct: 269 LDAAQVKSYIRYIADRRLIQLGLEPLFHVERNPLPWIDDMLNAVEHANFFENRATEYSRA 328 Query: 120 AEL-KWD 125 + + W+ Sbjct: 329 STVGTWE 335 >gi|151945057|gb|EDN63308.1| ribonucleotide reductase subunit [Saccharomyces cerevisiae YJM789] gi|190409471|gb|EDV12736.1| ribonucleotide reductase subunit [Saccharomyces cerevisiae RM11-1a] gi|256271075|gb|EEU06176.1| Rnr2p [Saccharomyces cerevisiae JAY291] Length = 399 Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++ EA +E Y + +P +G+N Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R G + +K ENPF +M E I L + NFFE RV++YQ+ Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381 Query: 122 LK 123 + Sbjct: 382 MS 383 >gi|283481249|emb|CAZ69365.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi virus 99B1] Length = 325 Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K + ++ A LE + E +P +G+N Sbjct: 196 RDEGLHTDFACMLYRN------HIIHKLPYETVLDIITNAVELERLFICEALPVSLIGIN 249 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A S Y++F+A+R +G + NPF WM E+I L+ + NFFE RV EYQ+ Sbjct: 250 AESMSTYIKFVADRLLISLGYAKHYNVV-NPFEWM-ELISLEGKTNFFEKRVGEYQKAGV 307 Query: 122 LK 123 + Sbjct: 308 MD 309 >gi|239982206|ref|ZP_04704730.1| ribonucleotide-diphosphate reductase small chain [Streptomyces albus J1074] gi|291454052|ref|ZP_06593442.1| ribonucleotide-diphosphate reductase subunit small [Streptomyces albus J1074] gi|291357001|gb|EFE83903.1| ribonucleotide-diphosphate reductase subunit small [Streptomyces albus J1074] Length = 350 Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 76/126 (60%), Gaps = 4/126 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F DV++ ++ E P L+ + Q++ ML EA E+ +A + G G+N Sbjct: 224 RDETMHMSFAFDVVDTVRKEEPELFDDKLQEQVVAMLKEAVEAELQFARDLCGDGLPGMN 283 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119 S +Y++ +A++R ++G P++ ++NPF +M E+ +++ NFFE RV+ YQ Sbjct: 284 TESMREYLECVADQRLTRLGFAPVY-GSQNPFSFM-ELQGVQELTNFFERRVSAYQVAVE 341 Query: 120 AELKWD 125 + +D Sbjct: 342 GTVSFD 347 >gi|302554045|ref|ZP_07306387.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces viridochromogenes DSM 40736] gi|302471663|gb|EFL34756.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces viridochromogenes DSM 40736] Length = 341 Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 42/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F DV++ ++ E P L+ + +Q+ ML EA E+ +A + G G+N Sbjct: 215 RDETMHMSFAFDVVDTVRKEEPELFDDQLRQEVTDMLREAVEAELQFARDLCGDGLPGMN 274 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++ +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E Sbjct: 275 TESMRQYLECVADQRLTRLGFAPVY-GSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 332 Query: 122 LKWD 125 D Sbjct: 333 GTVD 336 >gi|207343947|gb|EDZ71248.1| YJL026Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 399 Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++ EA +E Y + +P +G+N Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R G + +K ENPF +M E I L + NFFE RV++YQ+ Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381 Query: 122 LK 123 + Sbjct: 382 MS 383 >gi|262263187|dbj|BAI48096.1| ribonucleotide reductase M2 [Sus scrofa] Length = 355 Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 9/114 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N Sbjct: 247 RDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMN 299 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV E Sbjct: 300 CTLMKQYIEFVADRLMLELGFGKVFR-VENPFDFM-ENISLEGKTNFFEKRVGE 351 >gi|282849773|ref|ZP_06259157.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella parvula ATCC 17745] gi|282580710|gb|EFB86109.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella parvula ATCC 17745] Length = 342 Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I +++ E P L+T E + K M+ + EIA+ +GLN Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWGQYITDDKILGLN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119 E+Y++++AN R IGL L+ + ENP W+ +L + +FFE +VT Y + Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKENPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|172448|gb|AAA34987.1| ribonucleotide reductase subunit 2 (RNR2) [Saccharomyces cerevisiae] Length = 399 Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++ EA +E Y + +P +G+N Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R G + +K ENPF +M E I L + NFFE RV++YQ+ Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381 Query: 122 LK 123 + Sbjct: 382 MS 383 >gi|323308423|gb|EGA61668.1| Rnr2p [Saccharomyces cerevisiae FostersO] Length = 399 Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++ EA +E Y + +P +G+N Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R G + +K ENPF +M E I L + NFFE RV++YQ+ Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381 Query: 122 LK 123 + Sbjct: 382 MS 383 >gi|283768723|ref|ZP_06341634.1| ribonucleoside-diphosphate reductase, beta subunit [Bulleidia extructa W1219] gi|283104509|gb|EFC05882.1| ribonucleoside-diphosphate reductase, beta subunit [Bulleidia extructa W1219] Length = 348 Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats. Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +++ +++ E P L+T Q + M+HE EIA+ + GLN Sbjct: 220 RDENTHLWLFRNILLELQKEEPELFTDSNIQMIKDMIHEGVQQEIAWGQYVIGNNIPGLN 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 + E Y++++ N R +GL L++ Y E P W+ + D + +FFE RVT Y Sbjct: 280 SQMVEDYIKYLGNTRFATLGLGNLYEGYEEEPETMRWVKQYSDANMVKTDFFEARVTAYA 339 Query: 118 QGAELKWD 125 + + ++ D Sbjct: 340 KSSAIEDD 347 >gi|221060582|ref|XP_002260936.1| ribonucleotide reductase small subunit [Plasmodium knowlesi strain H] gi|193811010|emb|CAQ42908.1| ribonucleotide reductase small subunit,putative [Plasmodium knowlesi strain H] Length = 349 Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 68/121 (56%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ + P + + ++ EA +E ++ E++P +G+N Sbjct: 224 RDEGLHTDFNCLIYSLLENKLPE-------EVVQNIVKEAVEVERSFICESLPCDLIGMN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G +F + +NPF WM +I L+ + NFFE RV +YQ+ Sbjct: 277 SRLMSQYIEFVADRLLECLGSRKIF-HAKNPFNWMD-LISLQGKTNFFEKRVADYQKSGV 334 Query: 122 L 122 + Sbjct: 335 M 335 >gi|302536805|ref|ZP_07289147.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces sp. C] gi|302445700|gb|EFL17516.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces sp. C] Length = 356 Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats. Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+NF +V++ ++ E P L+ QQ+ ML EA E+ + + G G+N Sbjct: 230 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLKEAVEAELQFGRDLCGDGLPGMN 289 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S +Y++ +A++R ++G P++ ++NPF +M E+ +++ NFFE R + YQ E Sbjct: 290 TDSMREYLECVADQRLVRLGFPPVY-GSQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 347 Query: 122 LKWD 125 D Sbjct: 348 GTVD 351 >gi|209966751|ref|YP_002299666.1| ribonucleotide-diphosphate reductase subunit beta [Rhodospirillum centenum SW] gi|209960217|gb|ACJ00854.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodospirillum centenum SW] Length = 322 Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats. Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH I + ENP +WT+ FQ++ E A+ G G Sbjct: 191 VRDETLHTLSMIKLFRTFVNENPQVWTEAFQRELTVCCETIVHHEDAFIDLAFEMGPVEG 250 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + A ++Y+++IA+RR Q+GLEP+++ +NP PWM +++ + NFFE R TEY + Sbjct: 251 MTAEDVKRYIRWIADRRLGQLGLEPVYRIEKNPLPWMDAILNGIEHTNFFENRATEYSKA 310 Query: 120 AE-LKWD 125 A WD Sbjct: 311 ATRGTWD 317 >gi|320536436|ref|ZP_08036471.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema phagedenis F0421] gi|320146705|gb|EFW38286.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema phagedenis F0421] Length = 363 Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats. Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +++ E P L+T E + R M+ E EI + H + GLN Sbjct: 235 RDENTHLWLFRSIIQELQKEEPQLFTPENIEMFRAMIKEGCEQEIKWGHYVIGDDIPGLN 294 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y+Q++ N RC +G EPL++ + E P W+S+ + + +FFE + T Y Sbjct: 295 KQMITDYIQYLGNLRCENLGFEPLYEGHREEPASMSWVSQYSNANLIKTDFFEAKSTAYA 354 Query: 118 QGAELKWD 125 + + + D Sbjct: 355 KSSAMVDD 362 >gi|29829569|ref|NP_824203.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces avermitilis MA-4680] gi|29606677|dbj|BAC70738.1| putative ribonucleoside-diphosphate reductase beta chain [Streptomyces avermitilis MA-4680] Length = 338 Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats. Identities = 42/124 (33%), Positives = 73/124 (58%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F +V++ ++ E P L+ E QQ+ ML EA E+ + + G G+N Sbjct: 212 RDETMHMSFAFEVVDTVRKEEPELFDDELQQQVTDMLREAVEAELQFGRDLCGDGLPGMN 271 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++ +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E Sbjct: 272 TESMRQYLECVADQRLQRLGFAPVY-GSENPFSFM-ELQGVQELTNFFERRASAYQVAVE 329 Query: 122 LKWD 125 D Sbjct: 330 GTVD 333 >gi|313894221|ref|ZP_07827786.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp. oral taxon 158 str. F0412] gi|313441045|gb|EFR59472.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp. oral taxon 158 str. F0412] Length = 342 Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats. Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I +++ E P L+T E ++K M+ + T EIA+ +GLN Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEEKITDMIRQGTENEIAWGQYITDDKILGLN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119 E+Y++++AN R IGL L+ + +NP W+ +L + +FFE +VT Y + Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|269798663|ref|YP_003312563.1| ribonucleotide reductase [Veillonella parvula DSM 2008] gi|294792661|ref|ZP_06757808.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp. 6_1_27] gi|269095292|gb|ACZ25283.1| ribonucleotide reductase [Veillonella parvula DSM 2008] gi|294456560|gb|EFG24923.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp. 6_1_27] Length = 342 Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I +++ E P L+T E + K M+ + EIA+ +GLN Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWGQYITDDKILGLN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119 E+Y++++AN R IGL L+ + +NP W+ +L + +FFE +VT Y + Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|182419335|ref|ZP_02950587.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium butyricum 5521] gi|237666940|ref|ZP_04526925.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376666|gb|EDT74238.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium butyricum 5521] gi|237658139|gb|EEP55694.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium butyricum E4 str. BoNT E BL5262] Length = 344 Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats. Identities = 41/126 (32%), Positives = 69/126 (54%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I +++ EN L+T+E + + R M+ EI + H + G+N Sbjct: 218 RDENTHLWLFRNIIKELQNENAELFTEEIKNELREMMKTGVEQEILWGHYVIGDKIQGIN 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119 E+Y++++ N+R +I LEPLF+ + NP PW+ + + +FFE R T Y + Sbjct: 278 KKLIEEYIKYLGNKRLKEINLEPLFEGHDVNPAPWVDRQSNANSVKTDFFEARSTAYAKA 337 Query: 120 AELKWD 125 A L D Sbjct: 338 ATLVDD 343 >gi|303228685|ref|ZP_07315510.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella atypica ACS-134-V-Col7a] gi|303230495|ref|ZP_07317254.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella atypica ACS-049-V-Sch6] gi|302514861|gb|EFL56844.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella atypica ACS-049-V-Sch6] gi|302516665|gb|EFL58582.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella atypica ACS-134-V-Col7a] Length = 342 Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I +++ E P L+T E + K M+ + EIA+ +GLN Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWGQYITDDKILGLN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119 E+Y++++AN R IGL L+ + +NP W+ +L + +FFE +VT Y + Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|224438210|ref|ZP_03659145.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter cinaedi CCUG 18818] gi|313144656|ref|ZP_07806849.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter cinaedi CCUG 18818] gi|313129687|gb|EFR47304.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter cinaedi CCUG 18818] Length = 348 Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 66/125 (52%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL +IN ++ E PHL+T +++ M +A +E + +GL Sbjct: 224 RDEVTHLLVFQQMINALRKEQPHLFTPSLEEEVIAMFQKAVEIESVWGEYITQGQILGLT 283 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120 A +Y+Q++A+ R +GL ++ +++NP W+ + + NFFE +VT Y +G+ Sbjct: 284 AEIIREYIQYLADMRLRAVGLREIY-HSKNPIKWVEQFASFNDQKTNFFEAKVTNYSKGS 342 Query: 121 ELKWD 125 + +D Sbjct: 343 -INFD 346 >gi|68161126|gb|AAY86994.1| ribonucleotide reductase M2b [Ictalurus punctatus] Length = 192 Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats. Identities = 36/114 (31%), Positives = 64/114 (56%), Gaps = 9/114 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH NF + +Q++ K + + ++ +A +E + E +P +G+N Sbjct: 88 RDEGLHCNFACLIYSQLQK-------KPSADRVKDIITKAVRIEQEFLTEALPVDLIGIN 140 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 + +QY++F+A+R +G+ +++ ENPF +M E I L+ + NFFE RV E Sbjct: 141 SYLMKQYIEFVADRLLTDLGIPKVYE-AENPFDFM-EFISLEGKTNFFEKRVAE 192 >gi|308490921|ref|XP_003107652.1| hypothetical protein CRE_13354 [Caenorhabditis remanei] gi|308250521|gb|EFO94473.1| hypothetical protein CRE_13354 [Caenorhabditis remanei] Length = 147 Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K Q++ ++ +A +E + E +P +G+N Sbjct: 22 RDEGLHRDFACLLYSMLQ-------NKLTQERIFEIIKDAVCIEQEFLTEALPVDMIGMN 74 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+ ++G + L+ +NPF +M E I + + NFFE RV+EYQ+ Sbjct: 75 CRLMSQYIEFVADHLLAELGCDKLYN-VKNPFDFM-ENISIDGKTNFFEKRVSEYQRPGV 132 Query: 122 LK 123 + Sbjct: 133 MS 134 >gi|227498392|ref|ZP_03928542.1| ribonucleoside-diphosphate reductase [Acidaminococcus sp. D21] gi|226903854|gb|EEH89772.1| ribonucleoside-diphosphate reductase [Acidaminococcus sp. D21] Length = 342 Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL +++ +++ E P L+TKE M+ + EI + +GLN Sbjct: 214 RDEVTHLILFQNILRELRHERPDLFTKEQDAHIADMIRQGAENEIKWGQYITDDKILGLN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119 E+Y++++AN R IGL PL+ + ++NP W+ +L + +FFE +VT Y + Sbjct: 274 NGLIEKYIKYLANIRLEAIGLAPLYPEISQNPMEWIESFSNLNGTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|238018468|ref|ZP_04598894.1| hypothetical protein VEIDISOL_00295 [Veillonella dispar ATCC 17748] gi|237864939|gb|EEP66229.1| hypothetical protein VEIDISOL_00295 [Veillonella dispar ATCC 17748] Length = 342 Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I +++ E P L+T E + K M+ + EIA+ +GLN Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWGQYITDDKILGLN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119 E+Y++++AN R IGL L+ + +NP W+ +L + +FFE +VT Y + Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|150024561|ref|YP_001295387.1| ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium psychrophilum JIP02/86] gi|149771102|emb|CAL42569.1| Ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium psychrophilum JIP02/86] Length = 325 Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 39/124 (31%), Positives = 71/124 (57%), Gaps = 8/124 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + N HL K +++ R+++ +A +E + E++P +G+N Sbjct: 198 RDEGVHCDFAVHLHNH------HLVNKVPKERIRSIIVDALNIEREFITESLPVSLIGMN 251 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R ++G + + T NPF +M +I L+ + NFFE +V EYQ+ Sbjct: 252 AVLMTQYLEFVADRLLVELGCDREYN-TANPFDFMD-MISLQGKTNFFEKKVAEYQKAGV 309 Query: 122 LKWD 125 + D Sbjct: 310 MNTD 313 >gi|330804590|ref|XP_003290276.1| hypothetical protein DICPUDRAFT_56591 [Dictyostelium purpureum] gi|325079602|gb|EGC33194.1| hypothetical protein DICPUDRAFT_56591 [Dictyostelium purpureum] Length = 335 Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 9/120 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH NF + ++ K + ++ +A + E + +++P +G+N Sbjct: 201 RDEGLHCNFACLLYTKLI-------NKLESKTLEAIIRDAVVCEKEFICDSLPVDLIGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + S QY++F A+R +G + ++ NPF WM E+I L+++ NFFE +V EY + Sbjct: 254 SRSMSQYIEFCADRLLVSLGYKKIYN-ASNPFDWM-EMISLQRKTNFFEGKVAEYAKTGV 311 >gi|297449|emb|CAA46231.1| ribonucleotide reductase, small subunit [Schizosaccharomyces pombe] gi|447147|prf||1913428B ribonucleotide reductase:SUBUNIT=small Length = 391 Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +K + ++ + ++ EA +E Y + +P +G+N Sbjct: 261 RDEGLHTDFACLMFSHLKH-------RPGRKLLKPIIVEAVDIEKEYFTDALPVSLLGMN 313 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G + + T NPF +M E I L + NFFE +V++YQ Sbjct: 314 KDLMCQYIEFVADRLLVALGNDKYYNVT-NPFDFM-ENISLAGKTNFFEKKVSDYQIAGV 371 Query: 122 LK 123 + Sbjct: 372 MS 373 >gi|82538850|ref|XP_723858.1| ribonucleotide reductase small chain [Plasmodium yoelii yoelii str. 17XNL] gi|145580416|pdb|2P1I|A Chain A, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2 (Py03671) gi|145580417|pdb|2P1I|B Chain B, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2 (Py03671) gi|145580418|pdb|2P1I|C Chain C, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2 (Py03671) gi|145580419|pdb|2P1I|D Chain D, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2 (Py03671) gi|145580420|pdb|2P1I|E Chain E, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2 (Py03671) gi|145580421|pdb|2P1I|F Chain F, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2 (Py03671) gi|145580422|pdb|2P1I|G Chain G, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2 (Py03671) gi|145580423|pdb|2P1I|H Chain H, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2 (Py03671) gi|23478298|gb|EAA15423.1| Ribonucleotide reductase, small chain [Plasmodium yoelii yoelii] Length = 349 Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 68/121 (56%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ + P + ++ EA +E ++ E++P +G+N Sbjct: 224 RDEGLHTDFNCLIYSLLENKLPE-------NVVQNIVKEAVEVERSFICESLPCDLIGMN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G +F +++NPF WM +I L+ + NFFE RV +YQ+ Sbjct: 277 SRLMSQYIEFVADRLLECLGCSKVF-HSKNPFNWMD-LISLQGKTNFFEKRVADYQKSGV 334 Query: 122 L 122 + Sbjct: 335 M 335 >gi|294463759|gb|ADE77404.1| unknown [Picea sitchensis] Length = 289 Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + +K + +++ + ++ +A +E + E + VG+N Sbjct: 160 RDEGLHCDFACLLYSLLKSKL-------SEERVKAIVRDAVDIEREFVCEALSCDLVGMN 212 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++FIA+R +G ++ + ENPF WM +I L+ + NFFE RV +YQ+ + Sbjct: 213 ATLMSQYIKFIADRLLVALGHGKMY-HVENPFDWMD-LISLQGKTNFFERRVGDYQKASI 270 Query: 122 LK 123 + Sbjct: 271 MS 272 >gi|86134368|ref|ZP_01052950.1| ribonucleoside-diphosphate reductase small chain [Polaribacter sp. MED152] gi|85821231|gb|EAQ42378.1| ribonucleoside-diphosphate reductase small chain [Polaribacter sp. MED152] Length = 323 Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 37/120 (30%), Positives = 68/120 (56%), Gaps = 8/120 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + N H+ + + + + ++ +A +E + E++P +G+N Sbjct: 198 RDEGMHCDFAVHL------HNNHIVNRVPKDRIKEIIVDALDIEREFVTESLPVSLIGMN 251 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+ +R + G E ++ T NPF +M E+I L+ + NFFE RV+EYQ+ Sbjct: 252 AKLMTQYLEFVTDRLLLEFGCEKVYDVT-NPFDFM-EMISLEGKTNFFEKRVSEYQKAGV 309 >gi|227871657|ref|ZP_03990072.1| ribonucleoside-diphosphate reductase [Oribacterium sinus F0268] gi|227842499|gb|EEJ52714.1| ribonucleoside-diphosphate reductase [Oribacterium sinus F0268] Length = 347 Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL F +++ ++K E P L+ + + M+ + EIA+ + GLN Sbjct: 219 RDENTHLWFFRNMLLELKKEEPELFDEAHIAEITEMVKKGVEQEIAWGQYVIGDSIPGLN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 E Y++++ N R +GL L++ Y + P W+S+ D + +FFE R T Y Sbjct: 279 GKMVEDYIRYLGNLRYRSLGLPNLYEGYEKEPESMKWVSQYADANMVKTDFFEARSTAYA 338 Query: 118 QGAELKWD 125 + ++ D Sbjct: 339 KSTAIEDD 346 >gi|213402763|ref|XP_002172154.1| ribonucleoside-diphosphate reductase small chain [Schizosaccharomyces japonicus yFS275] gi|212000201|gb|EEB05861.1| ribonucleoside-diphosphate reductase small chain [Schizosaccharomyces japonicus yFS275] Length = 392 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + +K + ++ ++ EA +E Y + +P +G+N Sbjct: 263 RDEGVHTDFACLMFSHLKH-------RPGKKVVERIIIEAVNIEKEYFTDALPVYLLGMN 315 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R +G E + T NPF +M E I L + NFFE +V++YQ Sbjct: 316 CDLMCQYIEFVADRLLLSLGNEKYYNVT-NPFDFM-ENISLAGKTNFFEKKVSDYQIAGV 373 Query: 122 L 122 + Sbjct: 374 M 374 >gi|210616053|ref|ZP_03290925.1| hypothetical protein CLONEX_03144 [Clostridium nexile DSM 1787] gi|210149961|gb|EEA80970.1| hypothetical protein CLONEX_03144 [Clostridium nexile DSM 1787] Length = 355 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +++ ++K E P L+T+++ + R+M+ E EI + H + GLN Sbjct: 227 RDENTHLWLFRNILIELKKEQPDLFTEQYIDEYRSMIKEGCEQEIKWGHYVIGDDVQGLN 286 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y+Q++ N RC +G P+++ E W+S+ + + +FFE R T Y Sbjct: 287 REMITDYVQYLGNLRCTNLGFAPIYEGHETEPESMRWVSQYSNANAIKTDFFEARSTAYA 346 Query: 118 QGAELKWD 125 + + L D Sbjct: 347 KSSALVDD 354 >gi|256785295|ref|ZP_05523726.1| ribonucleotide-diphosphate reductase small chain [Streptomyces lividans TK24] gi|289769189|ref|ZP_06528567.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces lividans TK24] gi|289699388|gb|EFD66817.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces lividans TK24] Length = 343 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 41/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F DV++ ++ E P L+ + +++ ML EA E+ +A + G G+N Sbjct: 217 RDETMHMSFAFDVVDTVRKEEPELFDDQLREQVTDMLREAVEAELQFARDLCGDGLPGMN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++ +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E Sbjct: 277 TDSMRQYLECVADQRLTRLGFAPVY-GSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 334 Query: 122 LKWD 125 D Sbjct: 335 GTVD 338 >gi|21223593|ref|NP_629372.1| ribonucleotide-diphosphate reductase small chain [Streptomyces coelicolor A3(2)] gi|7328345|emb|CAB82486.1| class I ribonucleotide-diphosphate reductase small subunit chain [Streptomyces coelicolor A3(2)] gi|8546891|emb|CAB94610.1| ribonucleotide-diphosphate reductase small chain [Streptomyces coelicolor A3(2)] Length = 343 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 41/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F DV++ ++ E P L+ + +++ ML EA E+ +A + G G+N Sbjct: 217 RDETMHMSFAFDVVDTVRKEEPELFDDQLREQVTDMLREAVEAELQFARDLCGDGLPGMN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++ +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E Sbjct: 277 TDSMRQYLECVADQRLTRLGFAPVY-GSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 334 Query: 122 LKWD 125 D Sbjct: 335 GTVD 338 >gi|282879357|ref|ZP_06288101.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella buccalis ATCC 35310] gi|282881358|ref|ZP_06290037.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella timonensis CRIS 5C-B1] gi|281298554|gb|EFA90979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella buccalis ATCC 35310] gi|281304764|gb|EFA96845.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella timonensis CRIS 5C-B1] Length = 347 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P ++T E + M+ E EIA+ + GLN Sbjct: 219 RDENTHLWLFRNIIKELKKEEPEMFTPEKVKVYEEMMREGVRQEIAWGQYVIGNDIQGLN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 A Y+ ++ N R H +G + L++ + P W+++ D + +FFE + T Y Sbjct: 279 AQMVTDYIHYLGNLRWHSLGFDYLYEDNQKEPEDMKWVAQYSDPNMVKTDFFEAKSTAYA 338 Query: 118 QGAELKWD 125 + ++ D Sbjct: 339 KSTAIEDD 346 >gi|292658982|gb|ADE34370.1| ribonucleotide reductase small chain [Turbot reddish body iridovirus] Length = 312 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + Q + K Q+ + ++ +A +E A+ E + +G+N Sbjct: 188 RDEGLHCDFACMLFRQ-------MANKPSQEDAHQIISDAVDIETAFFREALKTPLLGMN 240 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + S Y+QF+A+R +G ++ NPF +M I ++ + NFFE RV+EYQ+ Sbjct: 241 SDSMRLYIQFVADRLLDALGYAKMYNVA-NPFDFMD-NISIEGKTNFFERRVSEYQRMGV 298 Query: 122 LK 123 Sbjct: 299 FT 300 >gi|308809930|ref|XP_003082274.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus tauri] gi|116060742|emb|CAL57220.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus tauri] Length = 382 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++ + ++ +A +E + + + VG+N Sbjct: 256 RDEGLHCDFACLLYGMLQ-------NPLSEATLHHIVGDAVKIEKEFVCDALSCSLVGMN 308 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A Y++F+A+R Q+G LF NPF WM E+I L+ + NFFE RV +YQ+ Sbjct: 309 ADMMSTYIEFVADRLLIQLGASKLFNAV-NPFDWM-ELISLQGKANFFEHRVDQYQKAGV 366 Query: 122 L 122 + Sbjct: 367 M 367 >gi|288800286|ref|ZP_06405744.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp. oral taxon 299 str. F0039] gi|288332499|gb|EFC70979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp. oral taxon 299 str. F0039] Length = 347 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 6/129 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L+T + M+ E EIA+ + GLN Sbjct: 219 RDENTHLWLFRNIIQELKKEEPDLFTPDKVAVYEAMMREGVEQEIAWGQYVIGNDIQGLN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT----ENPFPWMSEVIDLKK-EKNFFETRVTEY 116 A + Y++++ N R H +G + L++ EN W+S+ + + +FFE + T Y Sbjct: 279 AQMVDDYIRYLGNLRWHSLGFDYLYEDNRTEPEN-MRWVSQYSNANMVKTDFFEAKSTAY 337 Query: 117 QQGAELKWD 125 + L+ D Sbjct: 338 AKSTALEDD 346 >gi|27923845|sp|Q9QTF2|RIR2_RSIV RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|5688956|dbj|BAA82755.1| ribonucleotide reductase small subunit [Red sea bream iridovirus] gi|327396894|dbj|BAK14260.1| ribonucleotide diphosphate reductase small subunit [Red sea bream iridovirus] Length = 312 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + Q + K Q + ++ +A +E A+ E + +G+N Sbjct: 188 RDEGLHCDFACMLFRQ-------MANKPCQDDAHQIISDAVDIETAFFREALKTPLLGMN 240 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + S + Y+QF+A+R +G ++ + NPF +M I ++ + NFFE RV+EYQ+ Sbjct: 241 SDSMKLYIQFVADRLLDALGYAKMYNVS-NPFDFMD-NISIEGKTNFFERRVSEYQRMGV 298 Query: 122 LK 123 Sbjct: 299 FT 300 >gi|225677302|ref|ZP_03788281.1| ribonucleotide-diphosphate reductase beta [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590665|gb|EEH11913.1| ribonucleotide-diphosphate reductase beta [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 329 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGL 60 RDE+LH N I + N EN +W EF+++ + LE + GL Sbjct: 193 RDETLHTNSIIMLFNTFIKENNEIWDDEFKEELYSACRTIVELEDEFIKLAFDFGDVEGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A Y+ ++ANRR Q+GLE ++ +NP PW+ E+++ + NFFE RVTEY + A Sbjct: 253 SAEEVRNYIHYVANRRLMQLGLESIYDVNDNPIPWLDEILNGVEHTNFFENRVTEYSRAA 312 Query: 121 -ELKWD 125 + W+ Sbjct: 313 TQGTWE 318 >gi|294794440|ref|ZP_06759576.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp. 3_1_44] gi|294454770|gb|EFG23143.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp. 3_1_44] Length = 342 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I +++ E P L+T E + K M+ + T EIA+ +GLN Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGTENEIAWGQYITDDKILGLN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119 E+Y++++AN R IGL L+ + +NP W+ +L + +FFE +VT Y + Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|241951880|ref|XP_002418662.1| ribonucleoside diphosphate reductase, putative [Candida dubliniensis CD36] gi|223642001|emb|CAX43965.1| ribonucleoside diphosphate reductase, putative [Candida dubliniensis CD36] Length = 394 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H ++ + + +K K + ++ EA +E Y + +P +G+N Sbjct: 266 RDEGIHTDYACLLFSYLK-------NKPSPEIIEKIITEAVTIEKKYFSDALPVSLLGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R G + + T NPF +M E I L + NFFE RV++YQ+ Sbjct: 319 CDLMCQYVEFVADRLLVAFGNKKYYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 376 Query: 122 LK 123 ++ Sbjct: 377 ME 378 >gi|58584525|ref|YP_198098.1| ribonucleotide-diphosphate reductase subunit beta [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418841|gb|AAW70856.1| Ribonucleotide reductase, beta subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 331 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 45/126 (35%), Positives = 70/126 (55%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60 RDE+LH N I++ N EN +W EF++ + LE + G GL Sbjct: 193 RDETLHTNSIINLFNTFIKENNEIWNDEFKEGLYSACRTIVGLEDEFIKLAFDLGDVEGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A Y+++IANRR Q+GL+P++ +NP PW+ E+++ + NFFE RVTEY + A Sbjct: 253 SAEEVRNYIRYIANRRLMQLGLKPIYDINDNPLPWLDEILNGVEHTNFFENRVTEYSRAA 312 Query: 121 -ELKWD 125 + W+ Sbjct: 313 TQGTWE 318 >gi|153940168|ref|YP_001392091.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum F str. Langeland] gi|170756361|ref|YP_001782419.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum B1 str. Okra] gi|152936064|gb|ABS41562.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum F str. Langeland] gi|169121573|gb|ACA45409.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum B1 str. Okra] gi|322807123|emb|CBZ04697.1| ribonucleotide reductase of class Ia (aerobic),beta subunit [Clostridium botulinum H04402 065] Length = 342 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I ++K EN H++T+E +++ R M+ EI + +GLN Sbjct: 214 RDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRMGVEHEIQWGQYVTNNEILGLN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119 E+Y+++++N R IGL+PL+ + ++P W+ L + +FFE +VT Y + Sbjct: 274 DELIEKYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|294631326|ref|ZP_06709886.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces sp. e14] gi|292834659|gb|EFF93008.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces sp. e14] Length = 339 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 42/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F DV++ ++ E P L+ + +Q+ ML EA E+ +A + G G+N Sbjct: 213 RDETMHMSFAFDVVDTVRKEEPDLFDDQLEQQVTDMLREAVEAELQFARDLCGDGLPGMN 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++ +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E Sbjct: 273 TDSMRQYLECVADQRLTRLGFAPVY-GSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 330 Query: 122 LKWD 125 D Sbjct: 331 GTVD 334 >gi|120437796|ref|YP_863482.1| ribonucleoside-diphosphate reductase small chain [Gramella forsetii KT0803] gi|117579946|emb|CAL68415.1| ribonucleoside-diphosphate reductase small chain [Gramella forsetii KT0803] Length = 325 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 40/124 (32%), Positives = 71/124 (57%), Gaps = 8/124 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + NQ HL + ++K R +L +A +E + E++P +G+N Sbjct: 198 RDEGMHCDFAVHLHNQ------HLVNQVPKEKIREILIDALNIEREFVTESLPVSLIGMN 251 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+ +R ++ E + + NPF +M +I+L+ + NFFE RV+EYQ+ Sbjct: 252 AKLMTQYLEFVTDRLLVELDCEKEYNVS-NPFDFMD-MINLQGKTNFFEKRVSEYQKAGV 309 Query: 122 LKWD 125 + D Sbjct: 310 MNKD 313 >gi|42520108|ref|NP_966023.1| ribonucleotide-diphosphate reductase subunit beta [Wolbachia endosymbiont of Drosophila melanogaster] gi|58696705|ref|ZP_00372253.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Drosophila simulans] gi|58698234|ref|ZP_00373154.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Drosophila ananassae] gi|225630036|ref|YP_002726827.1| ribonucleotide-diphosphate reductase beta subunit [Wolbachia sp. wRi] gi|42409845|gb|AAS13957.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Drosophila melanogaster] gi|58535261|gb|EAL59340.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Drosophila ananassae] gi|58537117|gb|EAL60231.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Drosophila simulans] gi|225592017|gb|ACN95036.1| ribonucleotide-diphosphate reductase beta subunit [Wolbachia sp. wRi] Length = 329 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 44/126 (34%), Positives = 69/126 (54%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60 RDE+LH N I + N EN +W EF+++ + LE + G GL Sbjct: 193 RDETLHTNSIIMLFNTFIKENNEIWDNEFKEELYSACRTIVELEDEFIKLAFDLGDVEGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A Y++++ANRR Q+GLE ++ +NP PW+ E+++ + NFFE RVTEY + A Sbjct: 253 SAEEVRNYIRYVANRRLMQLGLESIYDVNDNPIPWLDEILNGVEHTNFFENRVTEYSRAA 312 Query: 121 -ELKWD 125 + W+ Sbjct: 313 TQGTWE 318 >gi|19881429|ref|NP_612246.1| putative ribonucleotide reductase small subunit [Infectious spleen and kidney necrosis virus] gi|19773634|gb|AAL98748.1|AF371960_24 putative ribonucleotide reductase small subunit [infectious spleen and kidney necrosis virus] Length = 312 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + Q + K Q + ++ +A +E A+ E + +G+N Sbjct: 188 RDEGLHCDFACMLFRQ-------MANKPCQDDAHQIISDAVDIETAFFQEALKTPLLGMN 240 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + S Y+QF+A+R +G ++ NPF +M I ++ + NFFE RV+EYQ+ Sbjct: 241 SDSMRLYIQFVADRLLDALGYAKMYNVA-NPFDFMD-NISIEGKTNFFERRVSEYQRMGV 298 Query: 122 LK 123 Sbjct: 299 FT 300 >gi|168179222|ref|ZP_02613886.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum NCTC 2916] gi|182669722|gb|EDT81698.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum NCTC 2916] Length = 342 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I ++K EN H++T+E +++ R M+ EI + +GLN Sbjct: 214 RDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRIGVEHEIQWGQYVTNNEILGLN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119 E+Y+++++N R IGL+PL+ + ++P W+ L + +FFE +VT Y + Sbjct: 274 DELIERYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|325475472|gb|EGC78653.1| ribonucleoside-diphosphate reductase [Treponema denticola F0402] Length = 351 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +++ E P L+T + + R M+ E EIA+ + + GLN Sbjct: 223 RDENTHLWLFRSMIQELQKEEPQLFTPQNVELFRGMIREGCEQEIAWGNYVIGNDIPGLN 282 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 + Y+Q++ N RC +G P++ + E P W+S+ + + +FFE + T Y Sbjct: 283 SQMITDYIQYLGNLRCENLGFAPIYDGHKEEPQSMSWVSQYSNANLIKTDFFEAKSTAYA 342 Query: 118 QGAELKWD 125 + + + D Sbjct: 343 KSSAMVDD 350 >gi|157825769|ref|YP_001493489.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia akari str. Hartford] gi|157799727|gb|ABV74981.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia akari str. Hartford] Length = 327 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH N I + ENP +WT+ +++ E A+ G G Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFEVGGIEG 248 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A QY+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TEY + Sbjct: 249 LTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATEYSKA 308 Query: 120 A-ELKWD 125 A W+ Sbjct: 309 ATTGSWE 315 >gi|53713986|ref|YP_099978.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides fragilis YCH46] gi|52216851|dbj|BAD49444.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides fragilis YCH46] Length = 349 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L+T + + M+ E EIA+ + GLN Sbjct: 221 RDENTHLWLFRNIILELKKEEPELFTPDKVKVYEEMMREGVKQEIAWGQYVIGDQIQGLN 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y+ F+ N R +G PL++ + P W+S+ + + +FFE + T Y Sbjct: 281 RQMISDYIHFLGNLRWSSLGYTPLYEDNRKEPESMHWVSQYSNANMVKTDFFEAKSTAYA 340 Query: 118 QGAELKWD 125 + L+ D Sbjct: 341 KSTALEDD 348 >gi|290957506|ref|YP_003488688.1| ribonucleotide-diphosphate reductase small chain [Streptomyces scabiei 87.22] gi|260647032|emb|CBG70131.1| ribonucleotide-diphosphate reductase small chain [Streptomyces scabiei 87.22] Length = 355 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 39/124 (31%), Positives = 73/124 (58%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F +V++ ++ E P L+ + +Q+ ML EA E+ + + G G+N Sbjct: 229 RDETMHMSFAFEVVDTVRKEEPELFDELLRQQVTDMLKEAVEAELQFGRDLCGDGLPGMN 288 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++ +A++R ++G P++ ++NPF +M E+ +++ NFFE R + YQ E Sbjct: 289 TESMRQYLECVADQRLTRLGFAPVY-GSQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 346 Query: 122 LKWD 125 D Sbjct: 347 GTVD 350 >gi|9633826|ref|NP_051904.1| gp015L [Rabbit fibroma virus] gi|6578545|gb|AAF17899.1|AF170722_17 gp015L [Rabbit fibroma virus] Length = 322 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL + ++ ++ EA ++E + + +P +G+N Sbjct: 198 RDEGLHCDFACLMFK-------HLNHTPSETRATDIIKEAVVIEQQFLTKALPVRLIGIN 250 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R ++G +F NPF +M E I L+ + NFFE RV++YQ+ Sbjct: 251 CDLMCQYIEFVADRLVTELGYSKIF-SATNPFDFM-ENISLEGKTNFFEKRVSDYQRMGV 308 Query: 122 LK 123 Sbjct: 309 AS 310 >gi|50237508|gb|AAT71841.1| ribonucleotide reductase small chain [Rock bream iridovirus] Length = 312 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + Q + K Q + ++ +A +E A+ E + +G+N Sbjct: 188 RDEGLHCDFACMLFRQ-------MANKPCQDDAHEIISDAVDIETAFFREALKTPLLGMN 240 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + S + Y+QF+A+R +G ++ NPF +M I ++ + NFFE RV+EYQ+ Sbjct: 241 SDSMKLYIQFVADRLLDALGYAKMYN-VGNPFDFMD-NISIEGKTNFFERRVSEYQRMGV 298 Query: 122 LK 123 Sbjct: 299 FT 300 >gi|253567022|ref|ZP_04844473.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp. 3_2_5] gi|265764336|ref|ZP_06092904.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp. 2_1_16] gi|15290503|gb|AAK92210.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides fragilis 638R] gi|251944146|gb|EES84655.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp. 3_2_5] gi|263256944|gb|EEZ28290.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp. 2_1_16] gi|301163665|emb|CBW23219.1| putative ribonucleoside-diphosphate reductase beta chain [Bacteroides fragilis 638R] Length = 349 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L+T + + M+ E EIA+ + GLN Sbjct: 221 RDENTHLWLFRNIILELKKEEPELFTPDKVKVYEEMMREGVKQEIAWGQYVIGDQIQGLN 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y+ F+ N R +G PL++ + P W+S+ + + +FFE + T Y Sbjct: 281 RQMISDYIHFLGNLRWSSLGYTPLYEDNRKEPESMHWVSQYSNANMVKTDFFEAKSTAYA 340 Query: 118 QGAELKWD 125 + L+ D Sbjct: 341 KSTALEDD 348 >gi|15150459|ref|NP_150454.1| LSDV020 ribonucleotide reductase small subunit [Lumpy skin disease virus NI-2490] gi|15149031|gb|AAK84981.1| LSDV020 ribonucleotide reductase small subunit [Lumpy skin disease virus NI-2490] gi|22595554|gb|AAN02587.1| ribonucleotide reductase small subunit [Lumpy skin disease virus NW-LW] Length = 321 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +K + +++EA +E + +P +G+N Sbjct: 196 RDEGLHCDFACLIFKHLKY-------PPSNEIITIIINEAVSIEKEFLTNIIPVKLIGMN 248 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++FIA+R ++G + +F + NPF +M E I L+ + NFFE RV+EYQ+ Sbjct: 249 CDLMSQYIEFIADRLLLELGCDKVF-MSTNPFDFM-ENISLEGKTNFFEKRVSEYQKMGV 306 Query: 122 LK 123 + Sbjct: 307 IS 308 >gi|308490981|ref|XP_003107682.1| CRE-RNR-2 protein [Caenorhabditis remanei] gi|308250551|gb|EFO94503.1| CRE-RNR-2 protein [Caenorhabditis remanei] Length = 377 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K Q++ ++ +A +E + E +P +G+N Sbjct: 252 RDEGLHRDFACLLYSMLQ-------NKLTQERIFEIIRDAVCIEQEFLTEALPVDMIGMN 304 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+ ++G + L+ +NPF +M E I + + NFFE RV+EYQ+ Sbjct: 305 CRLMSQYIEFVADHLLAELGCDKLYN-VKNPFDFM-ENISIDGKTNFFEKRVSEYQRPGV 362 Query: 122 LK 123 + Sbjct: 363 MS 364 >gi|258511567|ref|YP_003185001.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478293|gb|ACV58612.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 369 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++ ++I ENP + T + +++ M+ A EIA+ VGL Sbjct: 242 RDELTHLAIFRNLYHEIIRENPGIVTPDMEEEFVEMMRTAVQHEIAWGQYVTQGKIVGLT 301 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119 + Y++++AN R + L L+ + E+P PWM + + +FFE RVT Y + Sbjct: 302 DALIDAYIKYLANLRLQSLNLPILYPEIKEHPMPWMDSFAAINSHKTDFFEQRVTNYTKA 361 Query: 120 AELKWD 125 L WD Sbjct: 362 GNLNWD 367 >gi|9631087|ref|NP_047757.1| ribonucleotide reductase small subunit homolog [Lymantria dispar MNPV] gi|3822355|gb|AAC70306.1| ribonucleotide reductase small subunit homolog [Lymantria dispar MNPV] Length = 348 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL + + R ++ +A +E + E +P +GLN Sbjct: 224 RDEGLHCDFACLLFK-------HLVQRPSAARVREIVTDAVAIEQRFLTEALPVRLLGLN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R ++ + T NP +M+ +I L+ + NFFE +V EYQ+ Sbjct: 277 CETMSQYIEFVADRLLLELVGAKHYN-TPNPLDFMN-LISLEGKTNFFEKKVGEYQKFGV 334 Query: 122 L 122 + Sbjct: 335 M 335 >gi|60682187|ref|YP_212331.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides fragilis NCTC 9343] gi|60493621|emb|CAH08410.1| putative ribonucleoside-diphosphate reductase beta chain [Bacteroides fragilis NCTC 9343] Length = 349 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L+T + + M+ E EIA+ + GLN Sbjct: 221 RDENTHLWLFRNIILELKKEEPELFTPDKVKVYEEMMREGVKQEIAWGQYVIGDQIQGLN 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y+ F+ N R +G PL++ + P W+S+ + + +FFE + T Y Sbjct: 281 RQMISDYIHFLGNLRWSSLGYTPLYEDNRKEPESMHWVSQYSNANMVKTDFFEAKSTAYA 340 Query: 118 QGAELKWD 125 + L+ D Sbjct: 341 KSTALEDD 348 >gi|168184457|ref|ZP_02619121.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum Bf] gi|237796249|ref|YP_002863801.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium botulinum Ba4 str. 657] gi|182672468|gb|EDT84429.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum Bf] gi|229263158|gb|ACQ54191.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum Ba4 str. 657] Length = 342 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I ++K EN H++T+E +++ R M+ EI + +GLN Sbjct: 214 RDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRIGVEHEIQWGQYVTNNEILGLN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119 E+Y+++++N R IGL+PL+ + ++P W+ L + +FFE +VT Y + Sbjct: 274 DELIERYIKYLSNLRLVAIGLKPLYLEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|170761039|ref|YP_001788131.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum A3 str. Loch Maree] gi|169408028|gb|ACA56439.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum A3 str. Loch Maree] Length = 342 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I ++K EN H++T+E +++ R M+ EI + +GLN Sbjct: 214 RDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRMGVEHEIQWGQYVTNNEILGLN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119 E+Y+++++N R IGL+PL+ + ++P W+ L + +FFE +VT Y + Sbjct: 274 DELIERYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDGFSKLNSTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|89890041|ref|ZP_01201552.1| ribonucleoside-diphosphate reductase small chain [Flavobacteria bacterium BBFL7] gi|89518314|gb|EAS20970.1| ribonucleoside-diphosphate reductase small chain [Flavobacteria bacterium BBFL7] Length = 330 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 68/122 (55%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + N HL K +++ ++ +A +E + E++P +G+N Sbjct: 199 RDEGMHCDFAVHLHNH------HLVNKVPKERITEIIVDALNIEREFITESLPASLIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+ +R ++ +P++ T NPF +M +I ++ + NFFE RV EYQ+ Sbjct: 253 AKLMTQYLEFVTDRLLGELECDPVYNVT-NPFDFMD-LIGMEGKTNFFEKRVGEYQKAGV 310 Query: 122 LK 123 + Sbjct: 311 MN 312 >gi|225012154|ref|ZP_03702591.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium MS024-2A] gi|225003709|gb|EEG41682.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium MS024-2A] Length = 325 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + N HL K + + +L +A +E + E++P +G+N Sbjct: 198 RDEGVHCDFAVHLHNH------HLVNKVPPARIKEILLDALTIEREFITESLPISLIGMN 251 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+ +R ++GLE F T NPF +M +I L+ + NFFE RV EYQ+ Sbjct: 252 AKLMTQYLEFVTDRLLQELGLEKEFNVT-NPFDFMD-MISLQGKTNFFEKRVGEYQKAGV 309 Query: 122 LK 123 L Sbjct: 310 LN 311 >gi|212697417|ref|ZP_03305545.1| hypothetical protein ANHYDRO_01987 [Anaerococcus hydrogenalis DSM 7454] gi|325846383|ref|ZP_08169352.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|212675609|gb|EEB35216.1| hypothetical protein ANHYDRO_01987 [Anaerococcus hydrogenalis DSM 7454] gi|325481567|gb|EGC84607.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 352 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +IN +K E P L+T E ++ ++L E EIA+ + GLN Sbjct: 224 RDENTHLWLFRSMINDLKEERPDLFTDELKEFYLSLLKEGVEQEIAWGKYAIGDEIQGLN 283 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 + E Y++++ N R +GL +++ Y E P W+SE D + + +FFE +V+ Y Sbjct: 284 SQMIEDYIKYLGNLRAKGLGLGKIYEGYEEEPQSMKWVSEYSDPNQVKTDFFEGKVSAYS 343 Query: 118 QGAELKWD 125 + + ++ D Sbjct: 344 KSSVIEDD 351 >gi|62421216|gb|AAX82336.1| ribonucleotide reductase small chain [Orange-spotted grouper iridovirus] Length = 312 Score = 147 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + Q + K Q + ++ +A +E A+ E + +G+N Sbjct: 188 RDEGLHCDFACMLFRQ-------MANKPCQDDAHEIISDAVDIETAFFREALKTPLLGMN 240 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + S + Y+QF+A+R +G ++ NPF +M I ++ + NFFE RV+EYQ+ Sbjct: 241 SDSMKLYIQFVADRLLDALGYAKMYN-VGNPFDFMD-NISIEGKTNFFERRVSEYQRMGV 298 Query: 122 LK 123 Sbjct: 299 FT 300 >gi|254388985|ref|ZP_05004216.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces clavuligerus ATCC 27064] gi|294814921|ref|ZP_06773564.1| Ribonucleoside-diphosphate reductase beta chain protein [Streptomyces clavuligerus ATCC 27064] gi|326443293|ref|ZP_08218027.1| Ribonucleoside-diphosphate reductase [Streptomyces clavuligerus ATCC 27064] gi|197702703|gb|EDY48515.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces clavuligerus ATCC 27064] gi|218078699|emb|CAB90708.3| class Ia ribonucleotide-diphosphate reductase small subunit chain [Streptomyces clavuligerus ATCC 27064] gi|294327520|gb|EFG09163.1| Ribonucleoside-diphosphate reductase beta chain protein [Streptomyces clavuligerus ATCC 27064] Length = 339 Score = 147 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 42/124 (33%), Positives = 73/124 (58%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+NF +V++ ++ E P L+ QQ+ ML EA E+ ++ + G G+N Sbjct: 213 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLKEAVEAELQFSRDLCGDGLPGMN 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S +Y+Q +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E Sbjct: 273 TESMREYLQCVADQRLARLGFAPVY-GSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 330 Query: 122 LKWD 125 D Sbjct: 331 GSVD 334 >gi|239947951|ref|ZP_04699704.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsia endosymbiont of Ixodes scapularis] gi|239922227|gb|EER22251.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsia endosymbiont of Ixodes scapularis] Length = 327 Score = 147 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH N I + IENP +WT+ +++ E A+ G G Sbjct: 189 VRDETLHTNSIITLFKTFVIENPEVWTETLRKRIYEACTTIVHFEDAFIELAFEVGGIEG 248 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A QY+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TEY + Sbjct: 249 LTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATEYSKA 308 Query: 120 A-ELKWD 125 A W+ Sbjct: 309 ATTGSWE 315 >gi|20069937|ref|NP_613141.1| ribonucleotide reductase small subunit [Mamestra configurata NPV-A] gi|20043331|gb|AAM09166.1| ribonucleotide reductase small subunit [Mamestra configurata NPV-A] gi|33331769|gb|AAQ11077.1| putative ribonucleotide reductase small subunit-like protein [Mamestra configurata NPV-A] Length = 313 Score = 147 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 8/123 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F N E K +K M EA +E + + +P +G+N Sbjct: 191 RDEGMHTDFACLYYNTRVKE------KLSYEKILDMFKEAVDIEKEFFTDALPVSLLGMN 244 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A +Y++F+A+R Q+G + NPF +M+ I L+ + NFFE RV EY+ Sbjct: 245 ATMMCEYIEFVADRLLMQLGQPKYYN-ARNPFSFMN-NISLEGKTNFFERRVGEYKMFGT 302 Query: 122 LKW 124 Sbjct: 303 GSD 305 >gi|91215505|ref|ZP_01252476.1| probable ribonucleoside-diphosphate reductase small chain [Psychroflexus torquis ATCC 700755] gi|91186457|gb|EAS72829.1| probable ribonucleoside-diphosphate reductase small chain [Psychroflexus torquis ATCC 700755] Length = 326 Score = 147 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 70/122 (57%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + N+ HL + +++ R ++ +A +E + E++P +G+N Sbjct: 198 RDEGVHCDFAVHLHNE------HLVNQVPKERIRAIIVDALTIEREFVTESLPVSLIGMN 251 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R ++G + + T NPF +M +I L+ + NFFE RV EYQ+ Sbjct: 252 SNLMTQYLEFVADRLLFELGCDKEY-GTANPFDFMD-MISLQGKTNFFEKRVGEYQKAGV 309 Query: 122 LK 123 + Sbjct: 310 MN 311 >gi|289742419|gb|ADD19957.1| ribonucleotide reductase beta subunit [Glossina morsitans morsitans] Length = 396 Score = 147 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 9/124 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH F + + HL K +++ ++ +A +E + E +P +G+N Sbjct: 271 RDEGLHCEFAVLMFK-------HLIQKPSKERILEIITDAVKIEKEFLTEALPVDLIGMN 323 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + S +Y++++A+R ++ + + ENPF +M++ I + + NFFE RV EYQ+ Sbjct: 324 SESMCKYIEYVADRLLLELDVGK-YYLAENPFEFMNK-ISIDGKTNFFEKRVGEYQKIGV 381 Query: 122 LKWD 125 D Sbjct: 382 SSDD 385 >gi|157964544|ref|YP_001499368.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia massiliae MTU5] gi|157844320|gb|ABV84821.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia massiliae MTU5] Length = 336 Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH N I + ENP +WT+ +++ E A+ G G Sbjct: 190 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFEVGGIEG 249 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A QY+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TEY + Sbjct: 250 LTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATEYSKA 309 Query: 120 A-ELKWD 125 A W+ Sbjct: 310 ATTGSWE 316 >gi|148380773|ref|YP_001255314.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum A str. ATCC 3502] gi|153932443|ref|YP_001385057.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum A str. ATCC 19397] gi|153934989|ref|YP_001388527.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum A str. Hall] gi|148290257|emb|CAL84376.1| ribonucleoside-diphosphate reductase beta chain [Clostridium botulinum A str. ATCC 3502] gi|152928487|gb|ABS33987.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum A str. ATCC 19397] gi|152930903|gb|ABS36402.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum A str. Hall] Length = 342 Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I ++K EN H++T+E +++ R M+ EI + +GLN Sbjct: 214 RDEVTHLVLFQNIIKELKNENLHIFTEELEEEFRQMMRMGVEHEIQWGQYVTNNEILGLN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119 E+Y+++++N R IGL+PL+ + ++P W+ L + +FFE +VT Y + Sbjct: 274 DELIEKYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|323452425|gb|EGB08299.1| hypothetical protein AURANDRAFT_59025 [Aureococcus anophagefferens] Length = 319 Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 34/118 (28%), Positives = 64/118 (54%), Gaps = 9/118 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++++ + + + +++ A +E ++ +P +G+N Sbjct: 194 RDEGLHCDFACLLYSKLRKKLSDV-------QVASIVGAAVDIEKSFVVSALPVELIGMN 246 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + S +Y++F A+R ++G L+ NPF WM E+I L+ + NFFE RV EY + Sbjct: 247 SKSMCKYIEFCADRLLLELGYSTLY-GATNPFDWM-ELISLQGKTNFFEKRVGEYAKA 302 >gi|67459102|ref|YP_246726.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia felis URRWXCal2] gi|67004635|gb|AAY61561.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia felis URRWXCal2] Length = 327 Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH N I + ENP +WT+ +++ E A+ G G Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFEVGGIEG 248 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A QY+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TEY + Sbjct: 249 LTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATEYSKA 308 Query: 120 A-ELKWD 125 A W+ Sbjct: 309 ATTGSWE 315 >gi|325261084|ref|ZP_08127822.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp. D5] gi|324032538|gb|EGB93815.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp. D5] Length = 347 Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++ ++K E P L+T E +K R+M+ E EI + H + GLN Sbjct: 219 RDENTHLWLFRSILMELKKEEPWLFTAEKTEKYRSMIREGCEQEIRWGHYVIGDDIQGLN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y+Q++ N RC + LEP+++ E W+S+ + + +FFE R T Y Sbjct: 279 REMITDYIQYLGNLRCRGLELEPVYEGHEKEPESMSWVSQFSNANMIKTDFFEARSTAYA 338 Query: 118 QGAELKWD 125 + + L D Sbjct: 339 KSSALVDD 346 >gi|302558498|ref|ZP_07310840.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces griseoflavus Tu4000] gi|302476116|gb|EFL39209.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces griseoflavus Tu4000] Length = 341 Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats. Identities = 42/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F DV++ ++ E P L+ ++ Q+ ML EA E+ +A + G G+N Sbjct: 215 RDETMHMSFAFDVVDTVRKEEPELFDEQLGQQVTAMLREAVEAELQFARDLCGDGLPGMN 274 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++ +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E Sbjct: 275 TESMRQYLECVADQRLVRLGFAPVY-GSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 332 Query: 122 LKWD 125 D Sbjct: 333 GTVD 336 >gi|289449785|ref|YP_003474451.1| ribonucleoside-diphosphate reductase subunit beta [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184332|gb|ADC90757.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 400 Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++++++++E P L++ E ++ R M+ E EIA+ H + GL Sbjct: 272 RDENTHLWLFRNILSELQVERPDLFSAELVEEYRAMIKEGAEQEIAWGHYVLGDDIPGLT 331 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y+Q++AN R +G ++ P W+S+ D + +FFE + T Y Sbjct: 332 RQMVTDYIQYLANLRAQNLGFAYIYPDNHSEPASMSWISQYSDANMVKTDFFEAKSTAYA 391 Query: 118 QGAELKWD 125 + + D Sbjct: 392 KSTAMIDD 399 >gi|260061082|ref|YP_003194162.1| putative ribonucleoside-diphosphate reductase small chain [Robiginitalea biformata HTCC2501] gi|88785214|gb|EAR16383.1| probable ribonucleoside-diphosphate reductase small chain [Robiginitalea biformata HTCC2501] Length = 328 Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 67/122 (54%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H ++ + + N HL K +++ ++ A +E + E++P +G+N Sbjct: 199 RDEGMHCDYAVHL------HNNHLVNKVPKERITQIITNALDIEREFITESLPVSLIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+ +R ++ E ++ + NPF +M +I L+ + NFFE RV+EYQ+ Sbjct: 253 AKLMTQYLEFVTDRLLVELECEKVYN-STNPFDFMD-MISLQGKTNFFEKRVSEYQKAGV 310 Query: 122 LK 123 + Sbjct: 311 MN 312 >gi|297192180|ref|ZP_06909578.1| ribonucleoside-diphosphate reductase subunit beta protein [Streptomyces pristinaespiralis ATCC 25486] gi|197720175|gb|EDY64083.1| ribonucleoside-diphosphate reductase subunit beta protein [Streptomyces pristinaespiralis ATCC 25486] Length = 340 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 75/126 (59%), Gaps = 4/126 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+NF +V++ ++ E P L+ E +Q+ ML EA E+ + + +G G+N Sbjct: 214 RDETMHMNFAFEVVDTVRKEEPELFDDELRQQVTDMLKEAVEAELQFGRDLCGEGLPGMN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119 S +Y+Q +A++R ++G P++ ++NPF +M E+ +++ NFFE R + YQ Sbjct: 274 TESMREYLQCVADQRLTRLGFAPVY-GSQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 331 Query: 120 AELKWD 125 + +D Sbjct: 332 GSVAFD 337 >gi|9632043|ref|NP_048832.1| hypothetical protein PBCV1_A476R [Paramecium bursaria Chlorella virus 1] gi|1620147|gb|AAC96843.1| contains ribonucleotide reductase (RR) signature; similar to tobacco RR small subunit, corresponds to Swiss-Prot Accession Number P49730 [Paramecium bursaria Chlorella virus 1] Length = 324 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 70/122 (57%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH FG + ++++ + P + + ++ EA E + + +P +G+N Sbjct: 200 RDEGLHQQFGELMYSKLQNKLPF-------ETVKQIITEAVENEKEFICDAIPCRLIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G E ++ ++NPF +M E+I L+ + NFFE RV++YQ+ Sbjct: 253 AELMGQYIEFVADRIFVALGYEKVYN-SKNPFAFM-ELISLQGKTNFFEKRVSDYQRPGV 310 Query: 122 LK 123 +K Sbjct: 311 MK 312 >gi|323486976|ref|ZP_08092290.1| hypothetical protein HMPREF9474_04041 [Clostridium symbiosum WAL-14163] gi|323399688|gb|EGA92072.1| hypothetical protein HMPREF9474_04041 [Clostridium symbiosum WAL-14163] Length = 347 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +++ E P L+++E R M+ E EIA+ + GL Sbjct: 219 RDENTHLWLFGSIIRELQTEEPSLFSREKTDCYREMIREGCEQEIAWGCYAIGDEVPGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y++++ N RC +G EPL+ Y P W+S+ + + +FFE R T Y Sbjct: 279 KQMITDYIRYLGNLRCSNLGFEPLYDGYAHEPETMAWVSQYSNANMIKTDFFEARSTAYA 338 Query: 118 QGAELKWD 125 + + L D Sbjct: 339 KSSALVDD 346 >gi|1710399|sp|P50649|RIR2_PLAFG RecName: Full=Ribonucleoside-diphosphate reductase small subunit; AltName: Full=Ribonucleotide reductase R2 subunit; AltName: Full=Ribonucleotide reductase small subunit gi|349790|gb|AAA29754.1| ribonucleotide reductase R2 subunit [Plasmodium falciparum] Length = 322 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 37/123 (30%), Positives = 68/123 (55%), Gaps = 11/123 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEA--TLLEIAYAHETMPKGFVG 59 RDE LH +F + + + + P Q + ++ EA +E ++ E++P +G Sbjct: 195 RDEGLHTDFNCLIYSLLDNKLPE-------QMVQNIVKEAGGVEVEKSFICESLPCDLIG 247 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +N+ QY++F+A+R +G +F +++NPF WM +I L+ + NFFE RV +YQ+ Sbjct: 248 MNSRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWMD-LISLQGKTNFFEKRVADYQKS 305 Query: 120 AEL 122 + Sbjct: 306 GVM 308 >gi|78776214|ref|YP_392529.1| ribonucleotide-diphosphate reductase subunit beta [Sulfurimonas denitrificans DSM 1251] gi|78496754|gb|ABB43294.1| Ribonucleoside-diphosphate reductase [Sulfurimonas denitrificans DSM 1251] Length = 340 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+ ++ +++ M EA LE+A+ +GL Sbjct: 215 RDEVTHLVLFQNLINSLRKERPDLFNEKLKEEVIEMFKEAVALEVAWGKYITGGQILGLT 274 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120 EQY+Q++A+ R +G L+ T NP W+ + + NFFE V Y +G+ Sbjct: 275 DAIIEQYIQYLADDRLTSVGFAKLYNVT-NPIKWVDDFSKFNDQKTNFFEGTVANYSKGS 333 Query: 121 ELKWD 125 L +D Sbjct: 334 -LTFD 337 >gi|328884923|emb|CCA58162.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit [Streptomyces venezuelae ATCC 10712] Length = 338 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 41/124 (33%), Positives = 72/124 (58%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+NF +V++ ++ E P L+ +Q+ ML EA E+ + + G G+N Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPELFDDALRQQVTDMLKEAVEAELQFGRDLCGDGLPGMN 271 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S +Y+Q +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E Sbjct: 272 TESMREYLQCVADQRLQRLGFAPVY-GSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329 Query: 122 LKWD 125 D Sbjct: 330 GSVD 333 >gi|253827828|ref|ZP_04870713.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter canadensis MIT 98-5491] gi|313142391|ref|ZP_07804584.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter canadensis MIT 98-5491] gi|253511234|gb|EES89893.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter canadensis MIT 98-5491] gi|313131422|gb|EFR49039.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter canadensis MIT 98-5491] Length = 341 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 69/125 (55%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN +K E+P L+TK+ +++ M EA +E A+ +GL Sbjct: 217 RDEVTHLILFQNMINSVKKESPELFTKDLEEEVIEMFREAVKVETAWGEYITQGQILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120 + ++Y++++A+ R +IGL L+ ++P W+ + + NFFE VT Y +G+ Sbjct: 277 SEIIQEYIKYLADERLRRIGLPTLYN-AKHPIKWVDSFSSFNEQKTNFFEGNVTNYAKGS 335 Query: 121 ELKWD 125 + +D Sbjct: 336 -INFD 339 >gi|218289144|ref|ZP_03493380.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus acidocaldarius LAA1] gi|218240727|gb|EED07906.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus acidocaldarius LAA1] Length = 345 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++ ++I ENP + T + +++ M+ A EIA+ VGL Sbjct: 218 RDELTHLAIFRNLYHEIVRENPGIVTPDMEEEFVEMMRTAVQHEIAWGQYVTQGKIVGLT 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119 + Y++++AN R + L L+ + E+P PWM + + +FFE RVT Y + Sbjct: 278 DALIDAYIKYLANLRLQSLNLPILYPEIKEHPMPWMDSFAAINSHKTDFFEQRVTNYTKA 337 Query: 120 AELKWD 125 L WD Sbjct: 338 GNLNWD 343 >gi|225434341|ref|XP_002276454.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 841 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 R E LH +F + + ++ + P QK ++HEA +E + E +P +G+ Sbjct: 713 RYEGLHCDFACLLYSLLQKQLPW-------QKVHHIVHEAMEIETQFICEALPCALIGMK 765 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A Y++F+ +R +G E + ENPF WM E I L+ NFF+ R+ +YQ+ + Sbjct: 766 ATLMSHYIKFVVDRLLVALGYERKYN-VENPFDWM-EFIFLQGNANFFQRRMGDYQKASI 823 Query: 122 LK 123 + Sbjct: 824 MS 825 >gi|224418874|ref|ZP_03656880.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter canadensis MIT 98-5491] Length = 340 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 69/125 (55%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN +K E+P L+TK+ +++ M EA +E A+ +GL Sbjct: 216 RDEVTHLILFQNMINSVKKESPELFTKDLEEEVIEMFREAVKVETAWGEYITQGQILGLT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120 + ++Y++++A+ R +IGL L+ ++P W+ + + NFFE VT Y +G+ Sbjct: 276 SEIIQEYIKYLADERLRRIGLPTLYN-AKHPIKWVDSFSSFNEQKTNFFEGNVTNYAKGS 334 Query: 121 ELKWD 125 + +D Sbjct: 335 -INFD 338 >gi|239929012|ref|ZP_04685965.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces ghanaensis ATCC 14672] Length = 339 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 41/124 (33%), Positives = 73/124 (58%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F DV++ ++ E P L+ + Q+ ML EA E+ +A + G G+N Sbjct: 213 RDETMHMSFAFDVVDTVRKEEPELFDERLGQQVTDMLREAVEAELQFARDLCGDGLPGMN 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++ +A++R ++G P++ ++NPF +M E+ +++ NFFE R + YQ E Sbjct: 273 TESMRQYLECVADQRLTRLGFAPVY-GSQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 330 Query: 122 LKWD 125 D Sbjct: 331 GTVD 334 >gi|15617531|ref|NP_258331.1| RR2B [Spodoptera litura NPV] gi|15553267|gb|AAL01745.1|AF325155_57 ribonucleotide reductase small subunit homolog [Spodoptera litura NPV] Length = 333 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 66/122 (54%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + H+ K + + ++ EA +E + E +P +G+N Sbjct: 206 RDEGLHTDFACLMYS-------HIVNKPTRDRILDIITEAVAIENEFVTEALPVAMLGMN 258 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +Y++F+A+R ++ E + T+NPF +M+ +I L+ + NFFE +V+EYQ+ Sbjct: 259 NDLMSKYIEFVADRLLLELIGERHYN-TKNPFDFMN-LISLEGKTNFFEKKVSEYQKYGV 316 Query: 122 LK 123 + Sbjct: 317 MS 318 >gi|323692021|ref|ZP_08106269.1| ribonucleoside-diphosphate reductase [Clostridium symbiosum WAL-14673] gi|323503944|gb|EGB19758.1| ribonucleoside-diphosphate reductase [Clostridium symbiosum WAL-14673] Length = 347 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +++ E P L+++E R M+ E EIA+ + GL Sbjct: 219 RDENTHLWLFGSIIRELQTEEPSLFSREKTDCYREMIREGCEQEIAWGCYAIGDEVPGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y++++ N RC +G EPL+ Y P W+S+ + + +FFE R T Y Sbjct: 279 KQMITDYIRYLGNLRCSNLGFEPLYDGYVHEPETMAWVSQYSNANMIKTDFFEARSTAYA 338 Query: 118 QGAELKWD 125 + + L D Sbjct: 339 KSSALVDD 346 >gi|154505112|ref|ZP_02041850.1| hypothetical protein RUMGNA_02625 [Ruminococcus gnavus ATCC 29149] gi|153794591|gb|EDN77011.1| hypothetical protein RUMGNA_02625 [Ruminococcus gnavus ATCC 29149] Length = 347 Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats. Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L+T E + + ML E EIA+ H + GL Sbjct: 219 RDENTHLWLFRNMILEMKKELPELFTPEHIEILKEMLKEGVRQEIAWGHYVIGNQIAGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 +Y+Q++ N R +G +P++ T+ P W+S+ + + +FFE + T Y Sbjct: 279 KEMITEYIQYLGNLRFTNLGFDPIYPDQTQEPDSMRWVSQYSNANMVKTDFFEAKSTAYA 338 Query: 118 QGAELKWD 125 + L D Sbjct: 339 KSTALIDD 346 >gi|308485547|ref|XP_003104972.1| hypothetical protein CRE_24501 [Caenorhabditis remanei] gi|308257293|gb|EFP01246.1| hypothetical protein CRE_24501 [Caenorhabditis remanei] Length = 323 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 9/123 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +I K ++ ++ EA +E+ + + +P +G+N Sbjct: 198 RDEGLHRDFACLLFTKI-------VDKPSREIVCEIVDEAVTIELEFLDQALPVNVIGMN 250 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++++A+ ++G E L+ +T NPF +M E I + + NFFE RV+EYQ+ Sbjct: 251 YTLMSQYIKYVADHLLEELGFEKLY-HTINPFDFM-ENISIDGKTNFFEKRVSEYQRSGV 308 Query: 122 LKW 124 + Sbjct: 309 MAD 311 >gi|31322342|gb|AAP15464.1| ribonucleotide reductase small subunit [Rickettsia rickettsii str. 'Sheila Smith'] Length = 336 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH N I + ENP +WT+ +++ E A+ G G Sbjct: 197 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFEVGGIEG 256 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A QY+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TEY + Sbjct: 257 LTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRTTEYSKA 316 Query: 120 A-ELKWD 125 A W+ Sbjct: 317 ATTGSWE 323 >gi|153814165|ref|ZP_01966833.1| hypothetical protein RUMTOR_00374 [Ruminococcus torques ATCC 27756] gi|317499963|ref|ZP_07958199.1| ribonucleoside-diphosphate reductase [Lachnospiraceae bacterium 8_1_57FAA] gi|331087814|ref|ZP_08336739.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae bacterium 3_1_46FAA] gi|145848561|gb|EDK25479.1| hypothetical protein RUMTOR_00374 [Ruminococcus torques ATCC 27756] gi|316898680|gb|EFV20715.1| ribonucleoside-diphosphate reductase [Lachnospiraceae bacterium 8_1_57FAA] gi|330409509|gb|EGG88950.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae bacterium 3_1_46FAA] Length = 353 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I +++ E+P L+ + + +L EA EI +A + GLN Sbjct: 225 RDENTHLWLFRNIIIELRKEHPELFDDHMVSEMKELLMEAVRQEIEWACYVIGNEVPGLN 284 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y++++ N R +G P++ E W+S+ + + +FFE R T Y Sbjct: 285 EKMITDYIRYLGNLRWKSLGYAPIYPGCEREPETMKWVSQYSNANMVKTDFFEARSTAYA 344 Query: 118 QGAELKWD 125 + L D Sbjct: 345 KSTALIDD 352 >gi|297202281|ref|ZP_06919678.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces sviceus ATCC 29083] gi|197710199|gb|EDY54233.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces sviceus ATCC 29083] Length = 340 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 43/124 (34%), Positives = 73/124 (58%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F DV++ ++ E P L+ QQ+ ML EA E+ +A + G G+N Sbjct: 214 RDETMHMSFAFDVVDTVRKEEPELFDDRLQQQVTDMLAEAVEAELQFARDLCGDGLPGMN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++ +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E Sbjct: 274 TESMRQYLECVADQRLTRLGFAPVY-GSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 331 Query: 122 LKWD 125 D Sbjct: 332 GTVD 335 >gi|291437353|ref|ZP_06576743.1| ribonucleotide-diphosphate reductase small chain [Streptomyces ghanaensis ATCC 14672] gi|291340248|gb|EFE67204.1| ribonucleotide-diphosphate reductase small chain [Streptomyces ghanaensis ATCC 14672] Length = 340 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 41/124 (33%), Positives = 73/124 (58%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F DV++ ++ E P L+ + Q+ ML EA E+ +A + G G+N Sbjct: 214 RDETMHMSFAFDVVDTVRKEEPELFDERLGQQVTDMLREAVEAELQFARDLCGDGLPGMN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++ +A++R ++G P++ ++NPF +M E+ +++ NFFE R + YQ E Sbjct: 274 TESMRQYLECVADQRLTRLGFAPVY-GSQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 331 Query: 122 LKWD 125 D Sbjct: 332 GTVD 335 >gi|88607783|ref|YP_505152.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma phagocytophilum HZ] gi|88598846|gb|ABD44316.1| ribonucleoside-diphosphate reductase, beta subunit [Anaplasma phagocytophilum HZ] Length = 323 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 47/126 (37%), Positives = 70/126 (55%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60 RDESLH + I + N EN +W + +Q+ +LE + G GL Sbjct: 193 RDESLHTDSIIRLFNTFVHENGEIWDDDLKQELYDACKVIVMLEDEFIDLAFALGDVEGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A ++Y++FIANRR Q+ LEP++ ENP PW+ E+++ + NFFE RVTEY + A Sbjct: 253 SACEVKRYIRFIANRRLKQLHLEPIYDVAENPLPWLDEILNGVEHTNFFENRVTEYARAA 312 Query: 121 -ELKWD 125 E W+ Sbjct: 313 TEGTWE 318 >gi|237752265|ref|ZP_04582745.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter winghamensis ATCC BAA-430] gi|229376507|gb|EEO26598.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter winghamensis ATCC BAA-430] Length = 343 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E PHL+TK+ ++ M EA +E + +GL Sbjct: 219 RDEVTHLLLFQNMINSLRKEMPHLFTKDLIEEVLEMFREAVRVESTWGEYITQGQILGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120 + +Y++++A+ R ++GL L+ +P W+ + + NFFE VT Y +G+ Sbjct: 279 SEIIHEYIRYLADNRLTRVGLPALYN-ARHPIKWVDSFSSFNEQKTNFFEGNVTNYAKGS 337 Query: 121 ELKWD 125 + +D Sbjct: 338 -INFD 341 >gi|305665630|ref|YP_003861917.1| putative ribonucleoside-diphosphate reductase small chain [Maribacter sp. HTCC2170] gi|88710386|gb|EAR02618.1| probable ribonucleoside-diphosphate reductase small chain [Maribacter sp. HTCC2170] Length = 328 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 33/124 (26%), Positives = 68/124 (54%), Gaps = 8/124 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H ++ + + H+ K +++ ++ +A +E + E++P +G+N Sbjct: 199 RDEGMHCDYAVHLHKN------HIVNKVTKERITDIIVDALNIEREFITESLPVSLIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+ +R ++ + ++ + NPF +M +I L+ + NFFE RV+EYQ+ Sbjct: 253 SKLMTQYLEFVTDRLLVELECDKVYN-SSNPFDFMD-MISLQGKTNFFEKRVSEYQKAGV 310 Query: 122 LKWD 125 L D Sbjct: 311 LNKD 314 >gi|320527966|ref|ZP_08029132.1| ribonucleoside-diphosphate reductase, beta subunit [Solobacterium moorei F0204] gi|320131592|gb|EFW24156.1| ribonucleoside-diphosphate reductase, beta subunit [Solobacterium moorei F0204] Length = 349 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES HL +++ +++ E P L+T E Q R M++ EIA+ H + GLN Sbjct: 221 RDESTHLWLFRNILVELQKEEPELFTPENIQMIREMMNTGVEQEIAWGHYVIGDEIPGLN 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y++++ N R +G L+ +Y E P W+ + D + +FFE R + Y Sbjct: 281 KQMVTDYIKYLGNTRFATLGFGNLYEEYAEEPESMKWVKQYSDANMVKTDFFEARPSAYA 340 Query: 118 QGAELKWD 125 + ++ D Sbjct: 341 KSGAIEDD 348 >gi|154250961|ref|YP_001411785.1| ribonucleotide-diphosphate reductase subunit beta [Parvibaculum lavamentivorans DS-1] gi|154154911|gb|ABS62128.1| Ribonucleoside-diphosphate reductase [Parvibaculum lavamentivorans DS-1] Length = 319 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60 RDE+LH + + ENP +WT+E ++ E A+ G GL Sbjct: 190 RDETLHTVSAMKLFRTFVDENPEIWTEELRRDIYKACETIIHHEDAFIDLAFEMGSIEGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A + Y+++IA+RR Q+ L+P+++ +NP PWM E+++ + NFFE R TEY + + Sbjct: 250 SAQEVKNYIRYIADRRLVQLNLQPIYRTEKNPLPWMDEMLNGIEHTNFFENRATEYSKAS 309 Query: 121 E-LKWD 125 W+ Sbjct: 310 TRGSWE 315 >gi|332519182|ref|ZP_08395649.1| Ribonucleoside-diphosphate reductase [Lacinutrix algicola 5H-3-7-4] gi|332045030|gb|EGI81223.1| Ribonucleoside-diphosphate reductase [Lacinutrix algicola 5H-3-7-4] Length = 327 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + HL K +++ R +L +A +E + E++P +G+N Sbjct: 199 RDEGMHCDFAVHL------HEHHLINKVPKERIREILVDALNIEREFITESLPVSLIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+ + +G E + T NPF +M +I L+ + NFFE RV+EYQ+ Sbjct: 253 SKLMSQYLEFVTDGLLQDLGCEKEY-GTANPFDFMD-MISLQGKTNFFEKRVSEYQKAGV 310 Query: 122 LK 123 L Sbjct: 311 LN 312 >gi|34482564|emb|CAE09564.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN [Wolinella succinogenes] Length = 283 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN +K E P L+TK +++ M +A +E A+ +GL Sbjct: 159 RDEVTHLLIFQNMINALKKERPDLFTKSLEEEVVEMFRKAVAVESAWGDYITQGQILGLT 218 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120 + +Y+Q++A+ R ++G+ L+ ++P W+ + + + NFFE VT Y +G+ Sbjct: 219 SEIIHEYIQYLADDRLKRVGMPILYN-AKHPIKWVDQFSSFNEQKTNFFEGNVTNYAKGS 277 Query: 121 ELKWD 125 + +D Sbjct: 278 -INFD 281 >gi|15604372|ref|NP_220888.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia prowazekii str. Madrid E] gi|51473694|ref|YP_067451.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia typhi str. Wilmington] gi|3861064|emb|CAA14964.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN (nrdB) [Rickettsia prowazekii] gi|51460006|gb|AAU03969.1| Ribonucleotide reductase [Rickettsia typhi str. Wilmington] gi|292572126|gb|ADE30041.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia prowazekii Rp22] Length = 324 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH N I + ENP +WT+ +++ E A+ G G Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFEVGGIEG 248 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A QY+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TEY + Sbjct: 249 LTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATEYSKA 308 Query: 120 A-ELKWD 125 A W+ Sbjct: 309 ATTGSWE 315 >gi|58700135|ref|ZP_00374651.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Drosophila ananassae] gi|58533347|gb|EAL57830.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Drosophila ananassae] Length = 225 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 43/120 (35%), Positives = 66/120 (55%), Gaps = 1/120 (0%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60 RDE+LH N I + N EN +W EF+++ + LE + G GL Sbjct: 105 RDETLHTNSIIMLFNTFIKENNEIWDNEFKEELYSACRTIVELEDEFIKLAFDLGDVEGL 164 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A Y++++ANRR Q+GLE ++ +NP PW+ E+++ + NFFE RVTEY + A Sbjct: 165 SAEEVRNYIRYVANRRLMQLGLESIYDVNDNPIPWLDEILNGVEHTNFFENRVTEYSRAA 224 >gi|156839886|ref|XP_001643629.1| hypothetical protein Kpol_478p6 [Vanderwaltozyma polyspora DSM 70294] gi|156114248|gb|EDO15771.1| hypothetical protein Kpol_478p6 [Vanderwaltozyma polyspora DSM 70294] Length = 394 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 63/121 (52%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL K ++ EA +E Y + +P +G+N Sbjct: 264 RDEGLHTDFASLLFS-------HLDNKPDPAIVEKIVTEAVEIEKRYFIDALPVALLGMN 316 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R G E +K ENPF +M E I L + NFFE RV++YQ+ + Sbjct: 317 AKLMNQYVEFVADRLLVSFGNEKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKASV 374 Query: 122 L 122 + Sbjct: 375 I 375 >gi|117928932|ref|YP_873483.1| ribonucleoside-diphosphate reductase [Acidothermus cellulolyticus 11B] gi|117649395|gb|ABK53497.1| Ribonucleoside-diphosphate reductase [Acidothermus cellulolyticus 11B] Length = 348 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 48/126 (38%), Positives = 78/126 (61%), Gaps = 4/126 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES+H+ F DVI+ ++ E P L+ E +++R ML EA E +A + + +G G++ Sbjct: 222 RDESMHMAFAFDVIDTVRREEPELFDDELARQAREMLAEAVDCETQFAEDLLGQGVPGMS 281 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ--QG 119 Y++ +A+RRC Q+GLEP++ + NPF +M E+ D+++ NFFE RV YQ Sbjct: 282 LADMRSYLEHVADRRCVQLGLEPIY-GSPNPFTFM-ELQDVQELSNFFERRVAAYQIGVS 339 Query: 120 AELKWD 125 E+ +D Sbjct: 340 GEVAFD 345 >gi|320008647|gb|ADW03497.1| Ribonucleoside-diphosphate reductase [Streptomyces flavogriseus ATCC 33331] Length = 338 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 41/126 (32%), Positives = 73/126 (57%), Gaps = 4/126 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+NF +V++ ++ E P L+ E +Q+ ML EA E+ + + G G+N Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPDLFDDELRQQVTDMLKEAVEAELQFGRDLCGDGLPGMN 271 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119 S QY++ +A++R ++G L+ +ENPF +M E+ +++ NFFE R + YQ Sbjct: 272 TESMRQYLECVADQRLTRLGFPALY-GSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329 Query: 120 AELKWD 125 + +D Sbjct: 330 GSVGFD 335 >gi|292397811|ref|YP_003517877.1| RR2b [Lymantria xylina MNPV] gi|291065528|gb|ADD73846.1| RR2b [Lymantria xylina MNPV] Length = 338 Score = 146 bits (370), Expect = 7e-34, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL + + R ++ +A +E + E +P +GLN Sbjct: 214 RDEGLHCDFACLMFK-------HLVQRPSAARVREIVTDAVAIEQRFLTEALPVRLLGLN 266 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R + + T NP +M+ +I L+ + NFFE +V EYQ+ Sbjct: 267 CETMSQYIEFVADRLLVDLIGTKHYN-TANPLDFMT-LISLEGKTNFFEKKVGEYQKFGV 324 Query: 122 L 122 + Sbjct: 325 M 325 >gi|15892574|ref|NP_360288.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia conorii str. Malish 7] gi|34580440|ref|ZP_00141920.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia sibirica 246] gi|157828524|ref|YP_001494766.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933242|ref|YP_001650031.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia rickettsii str. Iowa] gi|229586746|ref|YP_002845247.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia africae ESF-5] gi|238650260|ref|YP_002916112.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia peacockii str. Rustic] gi|15619738|gb|AAL03189.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia conorii str. Malish 7] gi|28261825|gb|EAA25329.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia sibirica 246] gi|157801005|gb|ABV76258.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908329|gb|ABY72625.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia rickettsii str. Iowa] gi|228021796|gb|ACP53504.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia africae ESF-5] gi|238624358|gb|ACR47064.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia peacockii str. Rustic] Length = 328 Score = 146 bits (370), Expect = 7e-34, Method: Composition-based stats. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH N I + ENP +WT+ +++ E A+ G G Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFEVGGIEG 248 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A QY+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TEY + Sbjct: 249 LTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRTTEYSKA 308 Query: 120 A-ELKWD 125 A W+ Sbjct: 309 ATTGSWE 315 >gi|254517517|ref|ZP_05129573.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium sp. 7_2_43FAA] gi|226911266|gb|EEH96467.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium sp. 7_2_43FAA] Length = 344 Score = 146 bits (370), Expect = 8e-34, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 66/126 (52%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +++ ++++E P ++T E + + + M+ A EI++ + + G+N Sbjct: 218 RDENTHLWLFRNILKELQLEQPEIFTDEVKNQLKEMMKTAVEHEISWGNYVIGDNIQGIN 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119 Y++++ N R IGL+ +++ + NP W+ + D + +FFE + T Y + Sbjct: 278 KNLINDYIKYLGNLRMKAIGLDAIYEGHDNNPAAWVDILSDANSVKTDFFEAKSTAYAKA 337 Query: 120 AELKWD 125 L D Sbjct: 338 GALIDD 343 >gi|224539244|ref|ZP_03679783.1| hypothetical protein BACCELL_04146 [Bacteroides cellulosilyticus DSM 14838] gi|224519126|gb|EEF88231.1| hypothetical protein BACCELL_04146 [Bacteroides cellulosilyticus DSM 14838] Length = 349 Score = 146 bits (370), Expect = 8e-34, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I ++K E P L+T + Q M+ E EI + + GLN Sbjct: 221 RDENTHLWLFRSIILELKKEEPELFTPDKVQIYENMMREGVKQEIEWGQYVIGDNIQGLN 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y+ ++ N R +G PL+++ + P W+ + + + +FFE + T Y Sbjct: 281 RQMIADYIHYLGNLRWSSLGNPPLYEHNRKEPESMHWVLQYSNANMVKTDFFEAKSTAYA 340 Query: 118 QGAELKWD 125 + L+ D Sbjct: 341 KSTALEDD 348 >gi|150005609|ref|YP_001300353.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides vulgatus ATCC 8482] gi|254884474|ref|ZP_05257184.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp. 4_3_47FAA] gi|294778581|ref|ZP_06744003.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides vulgatus PC510] gi|319640834|ref|ZP_07995547.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp. 3_1_40A] gi|149934033|gb|ABR40731.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides vulgatus ATCC 8482] gi|254837267|gb|EET17576.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp. 4_3_47FAA] gi|294447530|gb|EFG16108.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides vulgatus PC510] gi|317387646|gb|EFV68512.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp. 3_1_40A] Length = 349 Score = 146 bits (370), Expect = 8e-34, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L+T + + M+ E EI + + GLN Sbjct: 221 RDENTHLWLFRNIILELKKEEPDLFTPDKVKIYEYMMREGVKQEIEWGQYVIGDNIQGLN 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 E Y+Q++ N R +G PL++ + P W+S+ + + +FFE + T Y Sbjct: 281 RKMIEDYIQYLGNLRWSSLGFGPLYEENHKEPESMHWVSQYSNANMVKTDFFEAKSTAYA 340 Query: 118 QGAELKWD 125 + L+ D Sbjct: 341 KSTALEDD 348 >gi|152993970|ref|YP_001359691.1| ribonucleotide-diphosphate reductase subunit beta [Sulfurovum sp. NBC37-1] gi|151425831|dbj|BAF73334.1| ribonucleoside-diphosphate reductase, beta subunit [Sulfurovum sp. NBC37-1] Length = 339 Score = 146 bits (370), Expect = 9e-34, Method: Composition-based stats. Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN K E P L+TKE M +A LE + +GL Sbjct: 215 RDEVTHLLLFQNMINATKRERPELFTKELIDDVYQMFRDAVKLECEWGTYITQGQILGLT 274 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120 EQY+Q++A++R H +GLE ++ E+P W+ + NFFE VT Y +G+ Sbjct: 275 NEIIEQYIQYLADKRLHAVGLEKIYN-VEHPIKWVDNFSQFNDQKTNFFEGNVTNYSKGS 333 >gi|255008714|ref|ZP_05280840.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides fragilis 3_1_12] gi|313146449|ref|ZP_07808642.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides fragilis 3_1_12] gi|313135216|gb|EFR52576.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides fragilis 3_1_12] Length = 349 Score = 146 bits (370), Expect = 9e-34, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L+T + + M+ E EI + + GLN Sbjct: 221 RDENTHLWLFRNIILELKKEEPELFTSDRVKVYEAMMREGVKQEIEWGQYVIGDEIQGLN 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 E Y+ ++ N R +G PL++ + P W+S+ + + +FFE + T Y Sbjct: 281 KKMIEDYIHYLGNLRWTSLGFTPLYEDNLKEPESMRWVSQYSNANMVKTDFFEAKSTAYA 340 Query: 118 QGAELKWD 125 + L+ D Sbjct: 341 KSTALEDD 348 >gi|161760549|ref|NP_906664.2| ribonucleotide-diphosphate reductase subunit beta [Wolinella succinogenes DSM 1740] Length = 341 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN +K E P L+TK +++ M +A +E A+ +GL Sbjct: 217 RDEVTHLLIFQNMINALKKERPDLFTKSLEEEVVEMFRKAVAVESAWGDYITQGQILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120 + +Y+Q++A+ R ++G+ L+ ++P W+ + + + NFFE VT Y +G+ Sbjct: 277 SEIIHEYIQYLADDRLKRVGMPILYN-AKHPIKWVDQFSSFNEQKTNFFEGNVTNYAKGS 335 Query: 121 ELKWD 125 + +D Sbjct: 336 -INFD 339 >gi|99036000|ref|ZP_01315041.1| hypothetical protein Wendoof_01000112 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 329 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 44/126 (34%), Positives = 69/126 (54%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60 RDE+LH N I + N EN +W EF+++ + LE + G GL Sbjct: 193 RDETLHTNSIIMLFNTFIKENNEIWDNEFKEELYSACRTIVELEDEFIKLAFDLGDVEGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A Y++++ANRR Q+GLE ++ +NP PW+ E+++ + NFFE RVTEY + A Sbjct: 253 SAEEVRNYIRYVANRRLMQLGLESIYDVNDNPTPWLDEILNGVEHTNFFENRVTEYSRAA 312 Query: 121 -ELKWD 125 + W+ Sbjct: 313 TQGTWE 318 >gi|254384639|ref|ZP_04999978.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces sp. Mg1] gi|194343523|gb|EDX24489.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces sp. Mg1] Length = 338 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+NF +V++ ++ E P L+ QQ+ ML EA E+ + + G G+N Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLKEAVDAELQFGRDLCGDGLPGMN 271 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S +Y++ +A++R ++G P++ ++NPF +M E+ +++ NFFE R + YQ E Sbjct: 272 TESMREYLECVADQRLVRLGFAPVY-GSQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329 Query: 122 LKWD 125 D Sbjct: 330 GTVD 333 >gi|302542646|ref|ZP_07294988.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces hygroscopicus ATCC 53653] gi|302460264|gb|EFL23357.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces himastatinicus ATCC 53653] Length = 343 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 41/126 (32%), Positives = 73/126 (57%), Gaps = 4/126 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES+H+ F V++ ++ E P L+ + +++ ML EA E+ +AH+ G G+N Sbjct: 217 RDESMHMEFAFSVVDTVREEEPDLFDDDLERQVTDMLKEAVEAELQFAHDLCGDGLPGMN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119 S Y++ +A++R ++G +F +ENPF +M E+ D+++ NFFE R + YQ Sbjct: 277 TESMRAYLECVADQRLARLGFPAVF-GSENPFSFM-ELQDVQELTNFFERRASAYQVAVE 334 Query: 120 AELKWD 125 + +D Sbjct: 335 GSVSFD 340 >gi|262277047|ref|ZP_06054840.1| ribonucleoside-diphosphate reductase, beta subunit [alpha proteobacterium HIMB114] gi|262224150|gb|EEY74609.1| ribonucleoside-diphosphate reductase, beta subunit [alpha proteobacterium HIMB114] Length = 342 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 1/122 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH N I + N ENP L + +++ E A+ G G Sbjct: 209 VRDETLHCNSMIKIFNTFCAENPGLLDESLKKEITDACRTIVEHEDAFIDLAFEMGPIEG 268 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A + Y+++IANRR Q+ L+ ++ ENP W+ +++ + NFFE R TEY + Sbjct: 269 LTAQQIKDYIRWIANRRLVQLKLDEIYDVKENPLEWIDTMLNGVEHMNFFEGRATEYSKA 328 Query: 120 AE 121 + Sbjct: 329 ST 330 >gi|157803769|ref|YP_001492318.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia canadensis str. McKiel] gi|157785032|gb|ABV73533.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia canadensis str. McKiel] Length = 324 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH N I + ENP +WT+ +++ E A+ G G Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYGACTTIVHFEDAFIELAFEVGGIEG 248 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A QY+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TEY + Sbjct: 249 LTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATEYSKA 308 Query: 120 A-ELKWD 125 A W+ Sbjct: 309 ATTGSWE 315 >gi|157953769|ref|YP_001498660.1| hypothetical protein AR158_C579R [Paramecium bursaria Chlorella virus AR158] gi|156068417|gb|ABU44124.1| hypothetical protein AR158_C579R [Paramecium bursaria Chlorella virus AR158] Length = 324 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 70/122 (57%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH FG + ++++ + P + + ++ EA E + + +P +G+N Sbjct: 200 RDEGLHQQFGELMYSKLQNKLPF-------ETVKQIITEAVENEKEFICDAIPCRLIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G E ++ ++NPF +M E+I L+ + NFFE RV++YQ+ Sbjct: 253 SELMGQYIEFVADRIFIALGYEKVYN-SKNPFAFM-ELISLQGKTNFFEKRVSDYQRPGV 310 Query: 122 LK 123 +K Sbjct: 311 MK 312 >gi|238061574|ref|ZP_04606283.1| ribonucleoside-diphosphate reductase [Micromonospora sp. ATCC 39149] gi|237883385|gb|EEP72213.1| ribonucleoside-diphosphate reductase [Micromonospora sp. ATCC 39149] Length = 344 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 4/126 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES+H+ F DV++ ++ E P L+ E ++ R ML EA E +A + + +G GL+ Sbjct: 218 RDESMHMAFAFDVVDTVRHEEPDLFDDELARQVREMLAEAVECEAQFAEDLLEQGVSGLS 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119 QY+Q +A+RR Q+G+ PL+ NPF +M E+ D+++ NFFE RV+ YQ G Sbjct: 278 LDDMRQYLQHVADRRLAQLGIAPLYGSA-NPFAFM-ELQDVQELSNFFERRVSAYQVGVT 335 Query: 120 AELKWD 125 + +D Sbjct: 336 GSVTFD 341 >gi|212693366|ref|ZP_03301494.1| hypothetical protein BACDOR_02879 [Bacteroides dorei DSM 17855] gi|237710423|ref|ZP_04540904.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp. 9_1_42FAA] gi|237726931|ref|ZP_04557412.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp. D4] gi|212664010|gb|EEB24584.1| hypothetical protein BACDOR_02879 [Bacteroides dorei DSM 17855] gi|229433787|gb|EEO43864.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides dorei 5_1_36/D4] gi|229455145|gb|EEO60866.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp. 9_1_42FAA] Length = 349 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L+T + + M+ E EI + + GLN Sbjct: 221 RDENTHLWLFRNIILELKKEEPDLFTPDKVKIYEYMMREGVKQEIEWGQYVIGDNIQGLN 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 E Y+Q++ N R +G PL++ + P W+S+ + + +FFE + T Y Sbjct: 281 RKMIEDYIQYLGNLRWSSLGFGPLYEENHKEPESMHWVSQYSNANMVKTDFFEAKSTAYA 340 Query: 118 QGAELKWD 125 + L+ D Sbjct: 341 KSTALEDD 348 >gi|194755279|ref|XP_001959919.1| GF11796 [Drosophila ananassae] gi|190621217|gb|EDV36741.1| GF11796 [Drosophila ananassae] Length = 393 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 36/120 (30%), Positives = 66/120 (55%), Gaps = 9/120 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL K +++ ++ +A +E + + +P +G+N Sbjct: 268 RDEGLHCDFAVLMFQ-------HLVQKPRRERIIEIIRDAVDIEQEFLTDALPVNLIGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A+R ++G+ ++ T+NPF +M E+I L + NFFE +V EYQ+ Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVGEYQRMGV 378 >gi|42525851|ref|NP_970949.1| ribonucleotide-diphosphate reductase subunit beta [Treponema denticola ATCC 35405] gi|41815901|gb|AAS10830.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema denticola ATCC 35405] Length = 351 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +++ E P L+T + + R M+ E EIA+ + GLN Sbjct: 223 RDENTHLWLFRSMIQELQKEEPQLFTPQNVELFRAMIKEGCEQEIAWGDYVIGNDIPGLN 282 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 + Y+Q++ N RC +G P++ + E P W S+ + + +FFE + T Y Sbjct: 283 SQMITDYIQYLGNLRCENLGFAPIYDGHREEPQSMSWASQYSNANLIKTDFFEAKSTAYA 342 Query: 118 QGAELKWD 125 + + + D Sbjct: 343 KSSAMVDD 350 >gi|319902178|ref|YP_004161906.1| ribonucleotide reductase [Bacteroides helcogenes P 36-108] gi|319417209|gb|ADV44320.1| ribonucleotide reductase [Bacteroides helcogenes P 36-108] Length = 347 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L+ + + M+ E EIA+ + GL+ Sbjct: 219 RDENTHLWLFRNIILELKKEEPELFVPDKVKVYEEMMREGVKQEIAWGQYVIGDNIQGLS 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117 E Y+ ++ N R +G PL++ + W+S+ + + +FFE + T Y Sbjct: 279 RKMLEDYIHYLGNLRWKSLGYAPLYEDNQTEPESMHWVSQYSNANMVKTDFFEAKSTAYA 338 Query: 118 QGAELKWD 125 + L+ D Sbjct: 339 KSTALEDD 346 >gi|257067181|ref|YP_003153437.1| ribonucleotide-diphosphate reductase subunit beta [Anaerococcus prevotii DSM 20548] gi|256799061|gb|ACV29716.1| Ribonucleoside-diphosphate reductase [Anaerococcus prevotii DSM 20548] Length = 352 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +IN +K E L+ E Q R ML E EIA+ ++ GLN Sbjct: 224 RDENTHLWLFRSLINDLKKEREDLFVPELQNYYREMLKEGVEQEIAWGKYSIGNSIAGLN 283 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117 E Y++++ N R +GLEPL++ + W+ E D + +FFE +VT Y Sbjct: 284 EKMIEDYIKYLGNLRAKGLGLEPLYEGYKEIPESMKWVDEYSDPNGVKTDFFEAKVTAYS 343 Query: 118 QGAELKWD 125 + + ++ D Sbjct: 344 KSSIIEDD 351 >gi|66822029|ref|XP_644369.1| ribonucleotide reductase small subunit [Dictyostelium discoideum AX4] gi|66823381|ref|XP_645045.1| ribonucleotide reductase small subunit [Dictyostelium discoideum AX4] gi|41019487|sp|P42521|RIR2_DICDI RecName: Full=Ribonucleoside-diphosphate reductase small subunit; AltName: Full=Ribonucleotide reductase small subunit gi|29611978|gb|AAB72227.2| ribonucleotide reductase small subunit [Dictyostelium discoideum] gi|60472492|gb|EAL70444.1| ribonucleotide reductase small subunit [Dictyostelium discoideum AX4] gi|60472997|gb|EAL70945.1| ribonucleotide reductase small subunit [Dictyostelium discoideum AX4] Length = 338 Score = 145 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 9/120 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +++ K + M+ +A E + E++P +G+N Sbjct: 206 RDEGLHCDFACLLYTKLQR-------KLDPKVIEKMIRDAVECEKEFICESLPVDLIGMN 258 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + S QY++F A+R +G + +F + NPF WM E+I L+++ NFFE +V EY + Sbjct: 259 SRSMSQYIEFCADRLVVSLGYKKIFN-SSNPFEWM-EMISLQRKSNFFEGKVAEYAKTGV 316 >gi|258648774|ref|ZP_05736243.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella tannerae ATCC 51259] gi|260851104|gb|EEX70973.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella tannerae ATCC 51259] Length = 350 Score = 145 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++ ++K E P ++T + R M+ + EI + + GL Sbjct: 222 RDENTHLWLFRSILLELKKEAPEMFTPDKVDVYRQMIAQGVEEEIKWGEYVLGDKIEGLT 281 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 + Y++++ N R +G +PL+ Y + P W+S+ + + +FFE R T Y Sbjct: 282 SEMIRDYIKYLGNLRTTSLGFDPLYDGYDKEPPSMSWVSQYSNANMIKTDFFEARSTAYA 341 Query: 118 QGAELKWD 125 + + L D Sbjct: 342 KSSALIDD 349 >gi|256545921|ref|ZP_05473276.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus vaginalis ATCC 51170] gi|256398343|gb|EEU11965.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus vaginalis ATCC 51170] Length = 352 Score = 145 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 38/128 (29%), Positives = 68/128 (53%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +IN +K E P L+T E ++ ++L E EIA+ + GLN Sbjct: 224 RDENTHLWLFRSMINDLKEERPDLFTDELKEFYLSLLKEGVEQEIAWGKYAIGDEIQGLN 283 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-EKNFFETRVTEYQ 117 + E Y++++ N R +GL +++ E+ W+SE D + + +FFE +V+ Y Sbjct: 284 SQMIEDYIKYLGNLRAKGLGLGTIYEGYEDEPQSMKWVSEYSDPNQVKTDFFEGKVSAYS 343 Query: 118 QGAELKWD 125 + + ++ D Sbjct: 344 KSSVIEDD 351 >gi|282861024|ref|ZP_06270089.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. ACTE] gi|282563682|gb|EFB69219.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. ACTE] Length = 340 Score = 145 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 41/126 (32%), Positives = 73/126 (57%), Gaps = 4/126 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+NF +V++ ++ E P L+ QQ+ ML EA E+ + + +G G+N Sbjct: 214 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLREAVEAELQFGRDLCGEGLPGMN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119 S QY++ +A++R ++G L+ +ENPF +M E+ +++ NFFE R + YQ Sbjct: 274 TESMRQYLECVADQRLTRLGFPALY-GSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 331 Query: 120 AELKWD 125 + +D Sbjct: 332 GSVGFD 337 >gi|303237757|ref|ZP_07324316.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella disiens FB035-09AN] gi|302482043|gb|EFL45079.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella disiens FB035-09AN] Length = 349 Score = 145 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L+T E M+ E EIA+ + GL Sbjct: 221 RDENTHLWLFRNIIVELKQEQPELFTPERIAVYEEMMREGVRQEIAWGQYVIGDKVQGLT 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y+ ++ N R +G L+++ +N W+++ + K + +FFE + T Y Sbjct: 281 QQMVADYIHYLGNLRWRSLGFGNLYEHNQNEPDDMQWVAQYSNANKVKTDFFEAKSTAYA 340 Query: 118 QGAELKWD 125 + L D Sbjct: 341 KSTALIDD 348 >gi|239944172|ref|ZP_04696109.1| putative ribonucleoside-diphosphate reductase small subunit [Streptomyces roseosporus NRRL 15998] gi|239990628|ref|ZP_04711292.1| putative ribonucleoside-diphosphate reductase small subunit [Streptomyces roseosporus NRRL 11379] gi|291447643|ref|ZP_06587033.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces roseosporus NRRL 15998] gi|291350590|gb|EFE77494.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces roseosporus NRRL 15998] Length = 338 Score = 145 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 41/122 (33%), Positives = 72/122 (59%), Gaps = 2/122 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+NF +V++ ++ E P L+ E QQ+ ML EA E+ + + +G G+N Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPDLFDDELQQQVTDMLKEAVEAELQFGRDLCGEGLPGMN 271 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S QY++ +A++R ++G ++ +ENPF +M E+ +++ NFFE R + YQ E Sbjct: 272 TESMRQYLECVADQRLARLGFPTVY-GSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329 Query: 122 LK 123 Sbjct: 330 GS 331 >gi|56416698|ref|YP_153772.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma marginale str. St. Maries] gi|254994906|ref|ZP_05277096.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma marginale str. Mississippi] gi|255003042|ref|ZP_05278006.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma marginale str. Puerto Rico] gi|255004164|ref|ZP_05278965.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma marginale str. Virginia] gi|56387930|gb|AAV86517.1| ribonuceoside-diphosphate reductase beta chain [Anaplasma marginale str. St. Maries] Length = 324 Score = 145 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 44/126 (34%), Positives = 67/126 (53%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60 RDE+LH I + N EN +W + +++ LE + G GL Sbjct: 193 RDETLHTESIIRLFNTFIHENQEIWDENLREELYGACRVIVSLEDEFIDLAFALGDVEGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A ++Y+++IANRR Q+ LEP++ NP PW+ E+++ + NFFE RVTEY + A Sbjct: 253 SAAEVKRYIRYIANRRLKQLDLEPIYGDNVNPLPWLDEILNGVEHTNFFENRVTEYSRAA 312 Query: 121 -ELKWD 125 E WD Sbjct: 313 TEGTWD 318 >gi|73974202|ref|XP_858105.1| PREDICTED: similar to ribonucleotide reductase M2 B (TP53 inducible) isoform 4 [Canis familiaris] Length = 374 Score = 145 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 32/144 (22%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEI--------------- 46 RDE LH +F + +L K +++ R ++ A +E Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQVSREAYMISTSLFLE 278 Query: 47 --------AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE 98 + E +P G +G+N +QY++F+A+R ++G +F+ ENPF +M E Sbjct: 279 IATCRSKHEFLTEALPVGLIGMNCVLMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-E 336 Query: 99 VIDLKKEKNFFETRVTEYQQGAEL 122 I L+ + NFFE RV EYQ+ A + Sbjct: 337 NISLEGKTNFFEKRVAEYQRFAVM 360 >gi|114799612|ref|YP_759103.1| ribonucleotide-diphosphate reductase subunit beta [Hyphomonas neptunium ATCC 15444] gi|114739786|gb|ABI77911.1| ribonucleoside-diphosphate reductase, beta subunit [Hyphomonas neptunium ATCC 15444] Length = 345 Score = 145 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 2/122 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDESLH I + + E + T E +++ R LE + G G Sbjct: 197 IRDESLHCEGMIKLFHSFCAETG-VMTDELRERIRDCCRTVVALEDKFIELAFEMGPVEG 255 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + A + Y+++IA+ R +Q+ LEP++ T++P PW++E+++ + NFFE R TEY +G Sbjct: 256 MTADDIKNYIRYIADWRLNQLKLEPIYGVTKHPIPWLTEILNGVEHANFFEQRSTEYSKG 315 Query: 120 AE 121 A Sbjct: 316 AT 317 >gi|329939692|ref|ZP_08288993.1| ribonucleotide-diphosphate reductase small chain [Streptomyces griseoaurantiacus M045] gi|329301262|gb|EGG45157.1| ribonucleotide-diphosphate reductase small chain [Streptomyces griseoaurantiacus M045] Length = 347 Score = 145 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 42/126 (33%), Positives = 75/126 (59%), Gaps = 4/126 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F DV++ ++ E P L+ +E ++ ML EA E+ +A + G G+N Sbjct: 221 RDETMHMSFAFDVVDTVRKEEPGLFDEELGRQVTDMLREAVEAELQFARDLCGDGLPGMN 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119 S QY+Q +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ Sbjct: 281 TESMRQYLQCVADQRLVRLGFAPVY-GSENPFSFM-ELQGVQELTNFFERRASAYQVAVE 338 Query: 120 AELKWD 125 + +D Sbjct: 339 GSVGFD 344 >gi|222475064|ref|YP_002563479.1| ribonuceoside-diphosphate reductase beta chain (nrdB) [Anaplasma marginale str. Florida] gi|222419200|gb|ACM49223.1| ribonuceoside-diphosphate reductase beta chain (nrdB) [Anaplasma marginale str. Florida] Length = 343 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 44/126 (34%), Positives = 67/126 (53%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60 RDE+LH I + N EN +W + +++ LE + G GL Sbjct: 212 RDETLHTESIIRLFNTFIHENQEIWDENLREELYGACRVIVSLEDEFIDLAFALGDVEGL 271 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A ++Y+++IANRR Q+ LEP++ NP PW+ E+++ + NFFE RVTEY + A Sbjct: 272 SAAEVKRYIRYIANRRLKQLDLEPIYGDNVNPLPWLDEILNGVEHTNFFENRVTEYSRAA 331 Query: 121 -ELKWD 125 E WD Sbjct: 332 TEGTWD 337 >gi|307328555|ref|ZP_07607729.1| Ribonucleoside-diphosphate reductase [Streptomyces violaceusniger Tu 4113] gi|306885823|gb|EFN16835.1| Ribonucleoside-diphosphate reductase [Streptomyces violaceusniger Tu 4113] Length = 340 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 42/126 (33%), Positives = 74/126 (58%), Gaps = 4/126 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES+H+ F V++ ++ E P L+ E +Q+ ML EA E+ +A + G G+N Sbjct: 214 RDESMHMEFAFSVVDTVREEEPDLFDDELRQQVTDMLKEAVEAELQFARDLCGDGLPGMN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119 S ++Y+Q +A++R ++G +F +ENPF +M E+ ++++ NFFE R + YQ Sbjct: 274 TASMQEYLQCVADQRLMRLGFPAVF-GSENPFSFM-ELQNVQELTNFFERRASAYQVAVE 331 Query: 120 AELKWD 125 + +D Sbjct: 332 GSVAFD 337 >gi|157827263|ref|YP_001496327.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia bellii OSU 85-389] gi|157802567|gb|ABV79290.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia bellii OSU 85-389] Length = 324 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH N I + ENP +WT+ + + E A+ G G Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTENLRSRIYKACTTIVHFEDAFIALAFEVGGIEG 248 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A Y+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TEY + Sbjct: 249 LTADEVRLYIRYIADRRLFQLGLKDIYMVKNNPLPWLDEMLNGVEHTNFFENRATEYSKA 308 Query: 120 A-ELKWD 125 A W+ Sbjct: 309 ATTGSWE 315 >gi|91205547|ref|YP_537902.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia bellii RML369-C] gi|91069091|gb|ABE04813.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia bellii RML369-C] Length = 324 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH N I + ENP +WT+ + + E A+ G G Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTENLRSRIYKACTTIVHFEDAFIALAFEVGGIEG 248 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A Y+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TEY + Sbjct: 249 LTADEVRLYIRYIADRRLFQLGLKDIYMVKNNPLPWLDEMLNGVEHTNFFENRATEYSKA 308 Query: 120 A-ELKWD 125 A W+ Sbjct: 309 ATTGSWE 315 >gi|40556174|ref|NP_955259.1| CNPV236 ribonucleotide reductase small subunit [Canarypox virus] gi|40233999|gb|AAR83582.1| CNPV236 ribonucleotide reductase small subunit [Canarypox virus] Length = 323 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 8/122 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K Q + ++ A +E + E + +G+N Sbjct: 197 RDEGLHCDFACLLF------TNYLSHKPSQDRVYEIIDSAVSVETEFLTEALSIDLIGMN 250 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + S +Y++F+++R +G + ENPF +M E I L+ + NFFE RV+ YQ+ Sbjct: 251 SKSMIEYIKFVSDRLLVSLGFSKKYN-VENPFSFM-ENISLEGKANFFEKRVSNYQKMGV 308 Query: 122 LK 123 + Sbjct: 309 MS 310 >gi|225010999|ref|ZP_03701465.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium MS024-3C] gi|225004906|gb|EEG42862.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium MS024-3C] Length = 328 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 8/124 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H ++ + + N HL K + + R +L +A +E + E++P +G+N Sbjct: 199 RDEGMHCDYAVHLHNH------HLINKVPKARIREILVDALNIERTFITESLPASLIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+ +R ++ E + + NPF +M +I L+ + NFFE RV+EYQ+ Sbjct: 253 AKLMTQYLEFVTDRLLVELQCEKEYNVS-NPFDFMD-MISLQGKTNFFEKRVSEYQKAGV 310 Query: 122 LKWD 125 L D Sbjct: 311 LNKD 314 >gi|320585888|gb|EFW98567.1| ribonucleotide reductase small subunit [Grosmannia clavigera kw1407] Length = 378 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 9/114 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +Q ++ +A +E + E +P +G+N Sbjct: 256 RDEGLHTDFACLLFS-------HLKNRPSKQLIEEIIVDAVKIEQEFLTEALPCALLGMN 308 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115 + +QY++F+A+R +G + ++ + NPF +M E I L + NFFE RV E Sbjct: 309 STLMKQYIEFVADRLLVALGNDKVYN-STNPFDFM-ENISLGGKTNFFEKRVPE 360 >gi|68304258|ref|YP_249726.1| RR2 [Chrysodeixis chalcites nucleopolyhedrovirus] gi|67973087|gb|AAY84053.1| RR2 [Chrysodeixis chalcites nucleopolyhedrovirus] Length = 318 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 6/120 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F N+ E K + K +M EA +E + +P +G+N Sbjct: 194 RDEGLHTDFACLYYNKYIPE----KNKLSKTKVLSMFVEAVDIEKDFFTNALPVAMLGMN 249 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + S +Y++F+A+R ++G + F T NPF +M+ I L+ + NFFE RV EY++ Sbjct: 250 SQSMCEYIEFVADRLLFELGYDKHFN-TANPFEFMN-NISLEGKTNFFEKRVGEYKRFGA 307 >gi|131840053|ref|YP_001096062.1| ORF23 [Cyprinid herpesvirus 3] gi|84181618|gb|ABC55221.1| hypothetical protein [Cyprinid herpesvirus 3] gi|109706628|gb|ABG42854.1| ORF23 [Cyprinid herpesvirus 3] gi|129560539|dbj|BAF48834.1| ribonucleotide reductase small chain [Cyprinid herpesvirus 3] Length = 335 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 8/124 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL K +++ R ++ EA +E + +++P VG+N Sbjct: 208 RDEGLHRDFACLLFSS------HLRHKPSKERVRAIITEAVEIEKEFLTQSLPVSLVGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +Y+Q++A+ Q+GL L+ T PF +M E I L+ + NFFE RV +YQ Sbjct: 262 HDLMCKYIQYVADHLLCQMGLSRLYN-TPCPFDFM-ENISLEGKTNFFEKRVADYQVKTT 319 Query: 122 LKWD 125 D Sbjct: 320 STVD 323 >gi|225386408|ref|ZP_03756172.1| hypothetical protein CLOSTASPAR_00155 [Clostridium asparagiforme DSM 15981] gi|225047489|gb|EEG57735.1| hypothetical protein CLOSTASPAR_00155 [Clostridium asparagiforme DSM 15981] Length = 347 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L++ E + + M+ E EIA+ H + GL Sbjct: 219 RDENTHLWLLRNMILELKKEEPQLFSPETVEMLKAMVEEGVEQEIAWGHYVIGDRISGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 +Y++++ N R +G EPL++ Y E P W+ + + + +FFE + T Y Sbjct: 279 REMVTEYIRYLGNLRWTSLGFEPLYEGYEEEPESMKWVGQYSNANMVKTDFFEAKSTAYA 338 Query: 118 QGAELKWD 125 + L D Sbjct: 339 KSTALVDD 346 >gi|242309209|ref|ZP_04808364.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pullorum MIT 98-5489] gi|239524250|gb|EEQ64116.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pullorum MIT 98-5489] Length = 341 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN K E+P +TK+ +++ M EA +EIA+ +GL Sbjct: 217 RDEVTHLLLFQNMINSTKKESPEFFTKDLEEEVLEMFREAVKVEIAWGEYITQGQILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120 A ++Y++++A+ R ++GL L+ ++P W+ + + NFFE VT Y +G+ Sbjct: 277 AEIIQEYIKYLADDRLRRVGLPVLYN-AKHPIKWVDSFSSFNEQKTNFFEGNVTNYAKGS 335 Query: 121 ELKWD 125 + +D Sbjct: 336 -INFD 339 >gi|317472120|ref|ZP_07931452.1| ribonucleotide reductase [Anaerostipes sp. 3_2_56FAA] gi|316900524|gb|EFV22506.1| ribonucleotide reductase [Anaerostipes sp. 3_2_56FAA] Length = 347 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +++ ++K E P L+ + R M+ + EI + H + GL Sbjct: 219 RDENTHLWLFKNILLELKKEEPSLFHPDCINDYRRMIKKGCEQEIRWGHYVIGDEIQGLK 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117 E+Y++++ N RC +G EP++ +E W+S+ + + +FFE + T Y Sbjct: 279 KEMVEEYIRYLGNLRCQNLGFEPIYPGSETEPESMSWVSQFSNANMIKTDFFEAKSTAYA 338 Query: 118 QGAELKWD 125 + + L D Sbjct: 339 KSSALVDD 346 >gi|227485717|ref|ZP_03916033.1| ribonucleoside-diphosphate reductase [Anaerococcus lactolyticus ATCC 51172] gi|227236272|gb|EEI86287.1| ribonucleoside-diphosphate reductase [Anaerococcus lactolyticus ATCC 51172] Length = 352 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 43/128 (33%), Positives = 66/128 (51%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +IN +K E P L+T E R ML E EI + + GL+ Sbjct: 224 RDENTHLWLFRSLINDLKKERPDLFTPEATIVYRDMLKEGVRQEIEWGKYAIGDNIAGLS 283 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 E Y++++ N R +G +PLF+ YTE P W+ E D + + +FFE +VT Y Sbjct: 284 TTMIEDYIKYLGNLRAKGLGFDPLFEGYTEIPQSMKWVDEYSDPNRVKTDFFEAKVTAYS 343 Query: 118 QGAELKWD 125 + + ++ D Sbjct: 344 KSSIIEDD 351 >gi|325286576|ref|YP_004262366.1| Ribonucleoside-diphosphate reductase [Cellulophaga lytica DSM 7489] gi|324322030|gb|ADY29495.1| Ribonucleoside-diphosphate reductase [Cellulophaga lytica DSM 7489] Length = 328 Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 34/120 (28%), Positives = 66/120 (55%), Gaps = 8/120 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H ++ + + N HL K +++ +L +A +E + E++P +G+N Sbjct: 199 RDEGMHCDYAVHLHNH------HLINKVPKERITEILVDALDIEREFITESLPVSLIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+ +R ++ + ++ + NPF +M +I L+ + NFFE RV EYQ+ Sbjct: 253 SKLMTQYLEFVTDRLLVELNCDKVYN-STNPFDFMD-MISLQGKTNFFEKRVAEYQKSGV 310 >gi|260589755|ref|ZP_05855668.1| ribonucleoside-diphosphate reductase, beta subunit [Blautia hansenii DSM 20583] gi|260539995|gb|EEX20564.1| ribonucleoside-diphosphate reductase, beta subunit [Blautia hansenii DSM 20583] Length = 359 Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I Q+K E P L+TKE Q + ML E EIA+ H + G++ Sbjct: 231 RDENTHLWLFRNMILQLKEEEPELFTKENIQALKEMLMEGVEQEIAWGHYVLGDDIPGIS 290 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 +Y++++ N R +G + ++ Y + P W+S + + +FFE + T Y Sbjct: 291 KEMITEYIKYLGNLRFTGLGFDVVYPGYEKEPESMKWVSYYSNANMVKTDFFEAKSTAYA 350 Query: 118 QGAELKWD 125 + L D Sbjct: 351 KSTALLDD 358 >gi|331083185|ref|ZP_08332301.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae bacterium 6_1_63FAA] gi|330404574|gb|EGG84114.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae bacterium 6_1_63FAA] Length = 347 Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I Q+K E P L+TKE Q + ML E EIA+ H + G++ Sbjct: 219 RDENTHLWLFRNMILQLKEEEPELFTKENIQALKEMLMEGVEQEIAWGHYVLGDDIPGIS 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 +Y++++ N R +G + ++ Y + P W+S + + +FFE + T Y Sbjct: 279 KEMITEYIKYLGNLRFTGLGFDVVYPGYEKEPESMKWVSYYSNANMVKTDFFEAKSTAYA 338 Query: 118 QGAELKWD 125 + L D Sbjct: 339 KSTALLDD 346 >gi|265756566|ref|ZP_06090772.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp. 3_1_33FAA] gi|263233754|gb|EEZ19369.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp. 3_1_33FAA] Length = 349 Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L+T + + M+ E EI + + GLN Sbjct: 221 RDENTHLWLFRNIILELKKEEPDLFTPDKVKIYEYMMREGVKQEIEWGQYVIGDNIQGLN 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 E Y+Q++ N R +G PL++ + P W+S+ + + +FFE + T Y Sbjct: 281 WKMIEDYIQYLGNLRWSSLGFGPLYEENHKEPESMHWVSQYSNANMVKTDFFEAKSTAYA 340 Query: 118 QGAELKWD 125 + L+ D Sbjct: 341 KSTALEDD 348 >gi|152989800|ref|YP_001355522.1| ribonucleotide-diphosphate reductase subunit beta [Nitratiruptor sp. SB155-2] gi|151421661|dbj|BAF69165.1| ribonucleoside-diphosphate reductase, beta subunit [Nitratiruptor sp. SB155-2] Length = 341 Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN +K E P L+TKE M A LE ++ +GL Sbjct: 217 RDEVTHLLIFQNMINTVKKERPELFTKELIDDVYKMFEGAVDLETSWGKYITQGQILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120 EQY++++A+ R ++GLEP++ E+P W+ + + NFFE VT Y +G+ Sbjct: 277 DEIIEQYIKYLADDRLKRVGLEPMYN-VEHPIKWVDDFSKFNDQKTNFFEGNVTNYSKGS 335 Query: 121 ELKWD 125 L +D Sbjct: 336 -LDFD 339 >gi|17158292|ref|NP_477710.1| wsv188 [Shrimp white spot syndrome virus] gi|14189948|gb|AAK55515.1|AF267731_1 ribonucleotide reductase small subunit [shrimp white spot syndrome virus] gi|15021490|gb|AAK77767.1|AF369029_98 ORF98, putative ribonucleotide reductase small subunit (RR2) [shrimp white spot syndrome virus] gi|17016586|gb|AAL33192.1| wsv188 [shrimp white spot syndrome virus] gi|19481835|gb|AAL89111.1| WSSV243 [shrimp white spot syndrome virus] Length = 413 Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 8/121 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F ++ + ++ P +++ ++ EA +E + ++P VG+N Sbjct: 250 RDEGLHRDFACMLLKKGFVDTP------SRERILEIVTEAVRIEQEFLTVSLPVKLVGMN 303 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A++ ++GLE + T NPFP+M I L+ + NFFE RV EYQ+ Sbjct: 304 CKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMD-NISLENKTNFFEKRVAEYQRAQV 361 Query: 122 L 122 + Sbjct: 362 M 362 >gi|328700093|ref|XP_001944536.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like [Acyrthosiphon pisum] Length = 361 Score = 144 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 9/120 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K Q ++ EA +E + +P VG++ Sbjct: 233 RDEGLHTDFACLLFK-------HLEQKPPQAVITHIICEAVTIEQDFLTNALPVRMVGMS 285 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 Y++F+A+R +++G +++ + NPFP+M +I + + NFFE RV +YQ+ + Sbjct: 286 CEKMAVYIEFVADRLLNELGCPTVYR-SSNPFPFMD-LISQQGKTNFFEKRVGDYQKASV 343 >gi|319953269|ref|YP_004164536.1| ribonucleoside-diphosphate reductase [Cellulophaga algicola DSM 14237] gi|319421929|gb|ADV49038.1| Ribonucleoside-diphosphate reductase [Cellulophaga algicola DSM 14237] Length = 326 Score = 144 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 34/124 (27%), Positives = 69/124 (55%), Gaps = 8/124 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + N H+ + +++ +L +A +E + E++P +G+N Sbjct: 198 RDEGMHCDFAVHL------HNKHIINQVPKERITEILVDALNIEREFITESLPASLIGMN 251 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+ +R ++ + ++ + NPF +M +I ++ + NFFE RV+EYQ+ Sbjct: 252 SKLMTQYLEFVTDRLLVELECDKVYN-STNPFDFMD-MIGMEGKTNFFEKRVSEYQKAGV 309 Query: 122 LKWD 125 L D Sbjct: 310 LNSD 313 >gi|330837704|ref|YP_004412345.1| ribonucleotide reductase [Spirochaeta coccoides DSM 17374] gi|329749607|gb|AEC02963.1| ribonucleotide reductase [Spirochaeta coccoides DSM 17374] Length = 360 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++ +++ E P ++T + R M+ + EIA+ H + VGLN Sbjct: 232 RDETTHLWLFRSILREMQKEEPAMFTPNLVDEYRAMIKQGADQEIAWGHYVIGDDIVGLN 291 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y+Q++ N RC +G +P+++ + + P W+ + + + +FFE R T Y Sbjct: 292 KDMVTDYIQYLGNLRCTDLGFQPIYEGHDKEPETMKWVGQYSNANLIKTDFFEARNTAYA 351 Query: 118 QGAELKWD 125 + L D Sbjct: 352 KSTSLLDD 359 >gi|223983469|ref|ZP_03633655.1| hypothetical protein HOLDEFILI_00935 [Holdemania filiformis DSM 12042] gi|223964641|gb|EEF68967.1| hypothetical protein HOLDEFILI_00935 [Holdemania filiformis DSM 12042] Length = 348 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +++ E P L+T E +Q R ML + EI + + GLN Sbjct: 220 RDENTHLWLFRSMILELRKEEPQLFTPEREQLYREMLKQGVEEEIEWGCAILGDEIPGLN 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y++++ N R I LE L+ E W+S+ + + +FFE R + Y Sbjct: 280 KTMIRDYIRYLGNLRAKAIHLEILYPGEEEEPASMKWVSQYANANLIKTDFFEARSSAYA 339 Query: 118 QGAELKWD 125 + + LK D Sbjct: 340 KASALKDD 347 >gi|323343338|ref|ZP_08083565.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella oralis ATCC 33269] gi|323095157|gb|EFZ37731.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella oralis ATCC 33269] Length = 349 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 6/129 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +++ ++K E P ++T E + M+ E EIA+ + GLN Sbjct: 221 RDENTHLWLFRNILQELKKEEPKMFTPEKVKVYEEMMREGVRQEIAWGQYVIGDEVPGLN 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT----ENPFPWMSEVIDLKK-EKNFFETRVTEY 116 Y+ ++ N R H +G L+ EN W+S+ + + +FFE + T Y Sbjct: 281 TKMVSDYIHYLGNLRWHSLGFGYLYDENIQEPEN-MKWVSQYSNANMVKTDFFEAKSTAY 339 Query: 117 QQGAELKWD 125 + L+ D Sbjct: 340 AKSTALEDD 348 >gi|182436093|ref|YP_001823812.1| putative ribonucleoside-diphosphate reductase small subunit [Streptomyces griseus subsp. griseus NBRC 13350] gi|326776718|ref|ZP_08235983.1| Ribonucleoside-diphosphate reductase [Streptomyces cf. griseus XylebKG-1] gi|178464609|dbj|BAG19129.1| putative ribonucleoside-diphosphate reductase small subunit [Streptomyces griseus subsp. griseus NBRC 13350] gi|326657051|gb|EGE41897.1| Ribonucleoside-diphosphate reductase [Streptomyces cf. griseus XylebKG-1] Length = 338 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 73/126 (57%), Gaps = 4/126 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+NF +V++ ++ E P L+ QQ+ ML EA E+ + + +G G+N Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPDLFDDALQQQVTDMLKEAVEAELQFGRDLCGEGLPGMN 271 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119 S QY++ +A++R ++G ++ +ENPF +M E+ +++ NFFE R + YQ Sbjct: 272 TESMRQYLECVADQRLARLGFPTVY-GSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329 Query: 120 AELKWD 125 + +D Sbjct: 330 GSVGFD 335 >gi|150015087|ref|YP_001307341.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium beijerinckii NCIMB 8052] gi|149901552|gb|ABR32385.1| Ribonucleoside-diphosphate reductase [Clostridium beijerinckii NCIMB 8052] Length = 344 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I +++ ENP L+T+E + + R M+ EI + H + G+N Sbjct: 218 RDENTHLWLFRNIIKELQNENPELFTEEVKNELRNMMKIGVEQEILWGHYVIGDKIQGIN 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119 E Y++++ N+R +I L PLF + +NP W+ + + + +FFE R T Y + Sbjct: 278 KQLIENYIKYLGNKRLKEINLSPLFKEQDKNPASWVDTLSNANSVKTDFFEARSTAYAKV 337 Query: 120 AELKWD 125 L D Sbjct: 338 TTLIDD 343 >gi|167748341|ref|ZP_02420468.1| hypothetical protein ANACAC_03085 [Anaerostipes caccae DSM 14662] gi|167652333|gb|EDR96462.1| hypothetical protein ANACAC_03085 [Anaerostipes caccae DSM 14662] Length = 358 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +++ ++K E P L+ + R M+ + EI + H + GL Sbjct: 230 RDENTHLWLFKNILLELKKEEPSLFHPDCINDYRRMIKKGCEQEIRWGHYVIGDEIQGLK 289 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117 E+Y++++ N RC +G EP++ +E W+S+ + + +FFE + T Y Sbjct: 290 KEMVEEYIRYLGNLRCQNLGFEPIYPGSETEPESMSWVSQFSNANMIKTDFFEAKSTAYA 349 Query: 118 QGAELKWD 125 + + L D Sbjct: 350 KSSALVDD 357 >gi|256391238|ref|YP_003112802.1| ribonucleoside-diphosphate reductase [Catenulispora acidiphila DSM 44928] gi|256357464|gb|ACU70961.1| Ribonucleoside-diphosphate reductase [Catenulispora acidiphila DSM 44928] Length = 331 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 4/126 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES+H+ F DV++ ++ E P L+ ++ Q+ R ML EA E +A + + G GL Sbjct: 205 RDESMHMAFAFDVVDTVRAEEPDLFDEKMAQQVREMLAEAVECETQFAGDLLGGGVSGLP 264 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ--QG 119 Y++ +A+RR Q+GLEP++ T NP +M E+ D+++ NFFE RV+ YQ G Sbjct: 265 VADMRAYLEHVADRRLEQLGLEPMY-GTANPLGFM-ELQDVQELSNFFERRVSAYQVAVG 322 Query: 120 AELKWD 125 + +D Sbjct: 323 GSVSFD 328 >gi|282174133|ref|YP_003358235.1| ORF96 [Anguillid herpesvirus 1] gi|281308976|gb|ADA57859.1| ORF96 [Anguillid herpesvirus 1] Length = 328 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 8/117 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K ++ ++ EA +E + E +P +G+N Sbjct: 202 RDEGLHCDFACLLFK------DHILGKPGYERVSQIVTEAVEIEKEFLSEALPVRLLGIN 255 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 Y++F+A+R +G + + +NPF +M E I ++ + NFFE V++Y++ Sbjct: 256 CEQMCSYIEFVADRLLAALGFPKRY-HVKNPFGFM-ESISMEGKTNFFEKNVSQYKK 310 >gi|7672989|gb|AAF66689.1|AF144620_1 ribonucleotide reductase small subunit [shrimp white spot syndrome virus] Length = 413 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 8/121 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F ++ + ++ P +++ ++ EA +E + ++P VG+N Sbjct: 250 RDEGLHRDFACMLLKKGFVDTP------SRERILEIVTEAVRIEQEFLTVSLPVKLVGMN 303 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A++ ++GLE + T NPFP+M I L+ + NFFE RV EYQ+ Sbjct: 304 CKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMD-NISLENKTNFFEKRVAEYQRAQV 361 Query: 122 L 122 + Sbjct: 362 M 362 >gi|269958883|ref|YP_003328672.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma centrale str. Israel] gi|269848714|gb|ACZ49358.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma centrale str. Israel] Length = 332 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60 RDE+LH I + N EN +W + + LE + G GL Sbjct: 201 RDETLHTESIIRLFNTFIHENQEIWDANLRAELYGACRVIVSLEDEFIDLAFALGDVEGL 260 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A ++Y+++IANRR Q+ LEP++ NP PW+ E+++ + NFFE RVTEY + A Sbjct: 261 SASEVKRYIRYIANRRLKQLDLEPIYGDNVNPLPWLDEILNGVEHTNFFENRVTEYSRAA 320 Query: 121 -ELKWD 125 E WD Sbjct: 321 TEGTWD 326 >gi|239628850|ref|ZP_04671881.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239518996|gb|EEQ58862.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 347 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I ++K E P L+T + + ML E EI + + GL Sbjct: 219 RDENTHLWLFRSMIGELKKEEPGLFTPDNVKMLEDMLREGVSQEIEWGCYVIGDEVPGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y++++ N R +G EPL++ W+++ + + +FFE + T Y Sbjct: 279 KDMVSSYIKYLGNLRWTGLGFEPLYEGYGKEPESMAWVNQYSNANMVKTDFFEAKSTAYA 338 Query: 118 QGAELKWD 125 + A + D Sbjct: 339 KSAAIIDD 346 >gi|157952945|ref|YP_001497837.1| hypothetical protein NY2A_B641R [Paramecium bursaria Chlorella virus NY2A] gi|155123172|gb|ABT15040.1| hypothetical protein NY2A_B641R [Paramecium bursaria Chlorella virus NY2A] Length = 324 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH FG + ++++ K + + ++ EA E + + +P +G+N Sbjct: 200 RDEGLHQQFGELMYSKLQ-------NKLSFETIKQIIMEAVTNEKEFICDAIPCSMIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY++F+A+R +G E ++ ++NPF +M E+I L+ + NFFE RV++YQ+ Sbjct: 253 ADLMNQYIEFVADRIFTALGYEKVYN-SKNPFAFM-ELISLEGKTNFFEKRVSDYQRPGV 310 Query: 122 LK 123 + Sbjct: 311 MN 312 >gi|168702494|ref|ZP_02734771.1| ribonucleoside-diphosphate reductase, beta subunit [Gemmata obscuriglobus UQM 2246] Length = 332 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 2/118 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES H+ F VI+ ++ E P L+ E + + ML EA E A+A + + +G GL+ Sbjct: 206 RDESAHMAFAFRVIDTVRREEPDLFDAELEAQIVAMLREAVECETAFARDVLGQGVAGLS 265 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 Y++++A+RR +G+ P+F +NPF +M + D+++ NFFE RV+ YQ G Sbjct: 266 LADLRSYLEYVADRRLESLGIAPVF-GAKNPFGFMD-LQDVQELTNFFERRVSAYQLG 321 >gi|325478871|gb|EGC81981.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus prevotii ACS-065-V-Col13] Length = 352 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +IN ++ E L+TKE ++ R ML E EIA+ + GL+ Sbjct: 224 RDENTHLWLFRSLINDLRKEREDLFTKEHKEYYRNMLKEGVEQEIAWGKYAIGDNIAGLS 283 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 E Y++++ N R +GLE L++ YTE P W+ E D + +FFE +VT Y Sbjct: 284 EKMIEDYIKYLGNLRAKGLGLEALYEGYTEIPDSMKWVDEYSDPNAVKTDFFEAKVTAYS 343 Query: 118 QGAELKWD 125 + + ++ D Sbjct: 344 KSSIIEDD 351 >gi|260912588|ref|ZP_05919119.1| ribonucleoside-diphosphate reductase [Prevotella sp. oral taxon 472 str. F0295] gi|260633300|gb|EEX51459.1| ribonucleoside-diphosphate reductase [Prevotella sp. oral taxon 472 str. F0295] Length = 348 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I+++K E P +T E + M+ E EIA+ + GLN Sbjct: 220 RDENTHLWLFRNIIHEMKKEEPEYFTPEKVKLYEEMMREGVRQEIAWGQYVIGDEVQGLN 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y++++ N R +G LF+ E P W+S+ + + +FFE + T Y Sbjct: 280 GQMVNDYIRYLGNMRWRSLGFGNLFEDNIEEPENMRWVSQYANANMVKTDFFEAKSTAYA 339 Query: 118 QGAELKWD 125 + ++ D Sbjct: 340 KSTAIEDD 347 >gi|210631890|ref|ZP_03297102.1| hypothetical protein COLSTE_00992 [Collinsella stercoris DSM 13279] gi|210159815|gb|EEA90786.1| hypothetical protein COLSTE_00992 [Collinsella stercoris DSM 13279] Length = 352 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I +++ E P L+T E + R ML E EIA+ + GL Sbjct: 224 RDENTHLWLFRNIILELQKEEPQLFTSENVEMLRQMLEEGVRQEIAWGRYVLGDAIPGLT 283 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117 E Y++++ N R +G L++ W+S+ + + +FFE + T Y Sbjct: 284 GDMVEGYIKYLGNLRWSSLGFGQLYEGYRSEPEDMAWVSQYSNANMVKTDFFEAKSTAYA 343 Query: 118 QGAELKWD 125 + L D Sbjct: 344 KSTALVDD 351 >gi|255724924|ref|XP_002547391.1| ribonucleoside-diphosphate reductase small chain 1 [Candida tropicalis MYA-3404] gi|240135282|gb|EER34836.1| ribonucleoside-diphosphate reductase small chain 1 [Candida tropicalis MYA-3404] Length = 387 Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H ++ + + +L K ++ EA +E Y + +P +G+N Sbjct: 259 RDEGIHTDYACLLFS-------YLENKPDPSIIEKIITEAVSIEKKYFSDALPVSLLGMN 311 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY+++ A+R G + + T NPF +M E I L + NFFE RV++YQ+ Sbjct: 312 CDLMCQYVEYCADRLLVAFGNDKYYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQRAGV 369 Query: 122 LK 123 ++ Sbjct: 370 ME 371 >gi|291165654|gb|EFE27703.1| ribonucleoside-diphosphate reductase, beta subunit [Filifactor alocis ATCC 35896] Length = 348 Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I ++K E P L+T E + R M+ + EI +A+ + GL Sbjct: 220 RDENSHLWLFRSIILELKKEEPELFTPENIEVFRNMIRQGVEEEIKWANYVIGDHIKGLT 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117 E Y++++ N RC +G EP+++ W+SE D + +FFE +V+ Y Sbjct: 280 MQMVEDYLKYLGNLRCRGLGFEPIYEGYQREPESMSWVSEYSDPNAIKTDFFEGKVSAYA 339 Query: 118 QGAELKWD 125 + + ++ D Sbjct: 340 KSSVIEDD 347 >gi|160937686|ref|ZP_02085046.1| hypothetical protein CLOBOL_02576 [Clostridium bolteae ATCC BAA-613] gi|158439331|gb|EDP17083.1| hypothetical protein CLOBOL_02576 [Clostridium bolteae ATCC BAA-613] Length = 347 Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +++ E P L+T + R+ML E EI + + GL Sbjct: 219 RDENTHLWLFRSMIAELRKEEPQLFTPKMVDMLRSMLEEGVAQEIQWGCYVIGDDVPGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y++++ N R +G L++ Y E P W+++ + + +FFE + T Y Sbjct: 279 REMVTDYIRYLGNLRWSGLGFGTLYEGYDEEPQSMKWVNQYSNANMVKTDFFEAKSTAYA 338 Query: 118 QGAELKWD 125 + A + D Sbjct: 339 KSAAIVDD 346 >gi|311743885|ref|ZP_07717691.1| ribonucleotide-diphosphate reductase beta subunit [Aeromicrobium marinum DSM 15272] gi|311313015|gb|EFQ82926.1| ribonucleotide-diphosphate reductase beta subunit [Aeromicrobium marinum DSM 15272] Length = 357 Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats. Identities = 48/123 (39%), Positives = 73/123 (59%), Gaps = 1/123 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLHL FGI++I + ENP + T EF + + M+ +A +E AY + +P G +GL Sbjct: 236 VRDESLHLKFGINLILTVLEENPEVATAEFAAEIQQMVLDAVEMEEAYNRDLLPGGILGL 295 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA QY++++A+RR ++G P + NP WM+ D + NFFE T Y+ A Sbjct: 296 NADYINQYVRYLADRRLEELGFGPHY-GATNPAKWMATANDTLQLVNFFEATNTSYEVNA 354 Query: 121 ELK 123 +L Sbjct: 355 KLT 357 >gi|15639047|ref|NP_218493.1| ribonucleotide-diphosphate reductase subunit beta [Treponema pallidum subsp. pallidum str. Nichols] gi|189025287|ref|YP_001933059.1| ribonucleotide-diphosphate reductase subunit beta [Treponema pallidum subsp. pallidum SS14] gi|6093976|sp|O83092|RIR2_TREPA RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit gi|3322311|gb|AAC65049.1| ribonucleoside-diphosphate reductase, subunit beta (nrdB) [Treponema pallidum subsp. pallidum str. Nichols] gi|189017862|gb|ACD70480.1| ribonucleoside-diphosphate reductase, subunit beta [Treponema pallidum subsp. pallidum SS14] gi|291059468|gb|ADD72203.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema pallidum subsp. pallidum str. Chicago] Length = 351 Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +++ E P ++T + R M+ E EI + + GLN Sbjct: 223 RDENTHLWLFRSIIQELQKEEPQVFTARNVRLFRDMIREGCEQEIKWGDYVIGDQIPGLN 282 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y++++ N RC +G EPL++ W+S+ + + +FFE + T Y Sbjct: 283 RHMVADYIRYLGNLRCENLGFEPLYEGHRVEPESMSWVSQYSNANLIKTDFFEAKSTAYA 342 Query: 118 QGAELKWD 125 + + + D Sbjct: 343 KSSAMVDD 350 >gi|88658048|ref|YP_507564.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia chaffeensis str. Arkansas] gi|88599505|gb|ABD44974.1| ribonucleoside-diphosphate reductase, beta subunit [Ehrlichia chaffeensis str. Arkansas] Length = 324 Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH I + N EN +W +Q+ LE + + G G Sbjct: 192 VRDETLHTESIIRLFNTFIQENYEIWDDSLKQELYEACRIIVSLEDEFINLAFACGDVEG 251 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L++ ++Y+++IANRR Q+ LEP++ +NP W+ E+++ + NFFE RVTEY + Sbjct: 252 LSSKEVKEYIRYIANRRLLQLNLEPIYDTNKNPLLWLDEILNGVEHTNFFENRVTEYARA 311 Query: 120 A-ELKWD 125 A E W+ Sbjct: 312 ATEGTWE 318 >gi|155370982|ref|YP_001426516.1| hypothetical protein ATCV1_Z035L [Acanthocystis turfacea Chlorella virus 1] gi|155124302|gb|ABT16169.1| hypothetical protein ATCV1_Z035L [Acanthocystis turfacea Chlorella virus 1] Length = 325 Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 9/124 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH FG + ++++ K ++++ EA E + + +P +G+N Sbjct: 201 RDEGLHQQFGELLYSKLE-------NKLSLDVVKSIVEEAVANEKDFICDAIPCRMIGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G F ENPF +M E+I L+ + NFFE RV+EYQ+ Sbjct: 254 SDLMSQYIEFVADRIFTALGYPKQF-GAENPFDFM-ELISLEGKSNFFERRVSEYQKAGV 311 Query: 122 LKWD 125 + D Sbjct: 312 MNAD 315 >gi|315452596|ref|YP_004072866.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter felis ATCC 49179] gi|315131648|emb|CBY82276.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter felis ATCC 49179] Length = 347 Score = 143 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL +I+ +K E P L++K+ ++ M EA LE + + LN Sbjct: 223 RDEVTHLALFQSMIHTLKKERPDLFSKDLVEEILEMFKEAVDLESTWGRVITQGEILDLN 282 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 + Y++++A+ R H IGL ++ +T++P W+ + + NFFE RV+ Y +G+ Sbjct: 283 PVTLRAYIEYLADTRLHAIGLPKIY-HTKHPMRWVDQFSSFNSQRSNFFEARVSNYSKGS 341 >gi|260909050|gb|ACX54162.1| RR2 protein [Shrimp white spot syndrome virus] gi|260909052|gb|ACX54163.1| RR2 protein [Shrimp white spot syndrome virus] gi|260909054|gb|ACX54164.1| RR2 protein [Shrimp white spot syndrome virus] gi|260909056|gb|ACX54165.1| RR2 protein [Shrimp white spot syndrome virus] Length = 349 Score = 143 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 8/121 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F ++ + ++ P +++ ++ EA +E + ++P VG+N Sbjct: 235 RDEGLHRDFACMLLKKGFVDTP------SRERILEIVTEAVRIEQEFLTVSLPVKLVGMN 288 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY++F+A++ ++GLE + T NPFP+M I L+ + NFFE RV EYQ+ Sbjct: 289 CKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMD-NISLENKTNFFEKRVAEYQRAQV 346 Query: 122 L 122 + Sbjct: 347 M 347 >gi|302867100|ref|YP_003835737.1| ribonucleotide reductase [Micromonospora aurantiaca ATCC 27029] gi|315506490|ref|YP_004085377.1| ribonucleotide reductase [Micromonospora sp. L5] gi|302569959|gb|ADL46161.1| ribonucleotide reductase [Micromonospora aurantiaca ATCC 27029] gi|315413109|gb|ADU11226.1| ribonucleotide reductase [Micromonospora sp. L5] Length = 342 Score = 143 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 43/126 (34%), Positives = 78/126 (61%), Gaps = 4/126 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES+H+ F DV+ ++ E P L+ E +++ + ML EA E+++A + + +G G++ Sbjct: 216 RDESMHMAFAFDVVETVRAEEPDLFDDEMERQVKEMLAEAVECEVSFAEDLLGQGVPGMS 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119 +Y+Q +A+RR +G+ P++ + NPF +M E+ D+++ NFFE RV+ YQ G Sbjct: 276 LADMREYLQHVADRRLAVLGIAPMY-GSGNPFAFM-ELQDVQELSNFFERRVSAYQVGVT 333 Query: 120 AELKWD 125 + +D Sbjct: 334 GSVTFD 339 >gi|295836584|ref|ZP_06823517.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces sp. SPB74] gi|197697282|gb|EDY44215.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces sp. SPB74] Length = 345 Score = 143 bits (361), Expect = 8e-33, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 74/126 (58%), Gaps = 4/126 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F DV++ ++ E P L+ E +Q+ + ML A E+ +A + G G+N Sbjct: 219 RDETMHMSFAFDVVDTVRKEEPELFDAELEQEVKDMLDGAVNAELQFARDLCGDGLPGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119 S +Y+Q +A++R ++G P++ + NPF +M E+ +++ NFFE R + YQ Sbjct: 279 TESMREYLQCVADQRLQRLGFAPVY-GSSNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 336 Query: 120 AELKWD 125 + +D Sbjct: 337 GSVSFD 342 >gi|325831705|ref|ZP_08164922.1| ribonucleoside-diphosphate reductase, beta subunit [Eggerthella sp. HGA1] gi|325486576|gb|EGC89025.1| ribonucleoside-diphosphate reductase, beta subunit [Eggerthella sp. HGA1] Length = 347 Score = 143 bits (361), Expect = 8e-33, Method: Composition-based stats. Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +++ ++K E P L+T E ++ R M+ E EI + H + GLN Sbjct: 219 RDENTHLWLFRNILLELKEEEPELFTPELVEEYRAMIKEGCEQEIRWGHYAIGDEVAGLN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y+Q++ N RC Q+G EPL++ E W+S+ + + +FFE R T Y Sbjct: 279 KQMVTDYIQYLGNLRCTQLGFEPLYEGHEREPESMSWVSQFSNANMIKTDFFEARSTAYA 338 Query: 118 QGAELKWD 125 + + L D Sbjct: 339 KSSALVDD 346 >gi|300706309|ref|XP_002995432.1| hypothetical protein NCER_101672 [Nosema ceranae BRL01] gi|239604534|gb|EEQ81761.1| hypothetical protein NCER_101672 [Nosema ceranae BRL01] Length = 325 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 11/118 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++PH ++ EA +E + ++P +G+N Sbjct: 202 RDEGLHCDFACLLNQYLINKSPH---------ILDIVKEAVEIEKEFLGVSLPVNLIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 QY++F+A+R +GLE + T NPF +M E I L + NFF+ R ++YQ+ Sbjct: 253 CKLMCQYIEFVADRLLINLGLEKYYN-TLNPFDFM-ENISLVGKTNFFDKRESQYQKA 308 >gi|160881347|ref|YP_001560315.1| ribonucleoside-diphosphate reductase [Clostridium phytofermentans ISDg] gi|160430013|gb|ABX43576.1| Ribonucleoside-diphosphate reductase [Clostridium phytofermentans ISDg] Length = 342 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 34/126 (26%), Positives = 70/126 (55%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL +++ ++++E ++TK +++ R M+ EIA+ +G+N Sbjct: 214 RDEITHLVLFQNIMKELRVEQKEMFTKGLEEELREMMRTGVEHEIAWGQYVTDNQILGIN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119 +QY+++++N+R +GLE L+ + T++P W+ ++ + +FFE +VT Y + Sbjct: 274 NELIDQYIKYLSNQRLRAVGLEILYPEITKHPMEWIESFSNINSTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AVFDFD 339 >gi|330467634|ref|YP_004405377.1| ribonucleoside-diphosphate reductase [Verrucosispora maris AB-18-032] gi|328810605|gb|AEB44777.1| Ribonucleoside-diphosphate reductase [Verrucosispora maris AB-18-032] Length = 342 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 46/126 (36%), Positives = 77/126 (61%), Gaps = 4/126 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES+H+ F DV++ ++ E P L+ E +Q+ R ML EA E+ +A + + +G G+ Sbjct: 216 RDESMHMAFAFDVVDTVRAEEPDLFDAEMEQQVRDMLAEAVDCEVQFAADLLEQGVSGMP 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119 QY+Q +A+RR +G+ P++ + NPF +M E+ D+++ NFFE RV+ YQ G Sbjct: 276 LADMRQYLQHVADRRLAMLGIAPMY-GSTNPFAFM-ELQDVQELSNFFERRVSAYQVGVT 333 Query: 120 AELKWD 125 + +D Sbjct: 334 GTVAFD 339 >gi|159040364|ref|YP_001539617.1| ribonucleoside-diphosphate reductase [Salinispora arenicola CNS-205] gi|157919199|gb|ABW00627.1| Ribonucleoside-diphosphate reductase [Salinispora arenicola CNS-205] Length = 350 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 43/126 (34%), Positives = 78/126 (61%), Gaps = 4/126 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES+H+ F DV++ I+ E P L+ + +++ + M+ EA E +A + + +G GL+ Sbjct: 224 RDESMHMAFAFDVVDTIRAEEPDLFDADLERQIKDMVTEAVDCEAQFAEDLLEQGVSGLS 283 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119 +Y+Q +A+RR +G+ P++ ++NPF +M E+ D+++ NFFE RV+ YQ G Sbjct: 284 LADMREYLQHVADRRLVTLGIAPIY-GSQNPFAFM-ELQDVQELSNFFERRVSAYQVGVS 341 Query: 120 AELKWD 125 + +D Sbjct: 342 GSVTFD 347 >gi|167948644|ref|ZP_02535718.1| Ribonucleotide reductase, beta subunit [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 124 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 52/125 (41%), Positives = 64/125 (51%), Gaps = 3/125 (2%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDE LH +FGI V QI +E Q R M E E AYA + +G Sbjct: 3 MRDEVLHASFGIRVAKQIMLEENIAPDP---QAIREMWDECEAAEDAYAGYILRDPILGY 59 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + +++ANRR QIGL + E PW+ E +L+KEKNFFET VTEYQ G Sbjct: 60 SKDDHMGQFRYVANRRARQIGLSEPYPGAEATLPWLDEQANLRKEKNFFETTVTEYQTGG 119 Query: 121 ELKWD 125 L WD Sbjct: 120 ALNWD 124 >gi|74229799|ref|YP_309003.1| ribonucleotide reductase small subunit (rr2) [Trichoplusia ni SNPV] gi|72259713|gb|AAZ67484.1| ribonucleotide reductase small subunit (rr2) [Trichoplusia ni SNPV] Length = 318 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 6/120 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F N+ + K + K M EA +E + +P +G+N Sbjct: 194 RDEGLHTDFACLYYNKYIAKE----DKLSESKVLNMFKEAVDIEKDFFTNALPVAMLGMN 249 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A S +Y++F+A+R ++G E FK T NPF +M+ I L+ + NFFE RV EY++ Sbjct: 250 AHSMCEYIEFVADRLLIELGYEKYFK-TLNPFEFMN-NISLEGKTNFFEKRVGEYKRFGA 307 >gi|47213103|emb|CAF89523.1| unnamed protein product [Tetraodon nigroviridis] Length = 407 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 22/121 (18%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K Q ++ A +E + E +P +G+N Sbjct: 295 RDEGLHCDFACLMFK-------HLLHKPSAQTVGAIIRNAVEIEQEFLTEALPVKLIGMN 347 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 ++Y++FI ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 348 CQLMKRYIEFIYR--------------AENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 392 Query: 122 L 122 + Sbjct: 393 M 393 >gi|326792202|ref|YP_004310023.1| ribonucleotide reductase [Clostridium lentocellum DSM 5427] gi|326542966|gb|ADZ84825.1| ribonucleotide reductase [Clostridium lentocellum DSM 5427] Length = 342 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I ++K ENP L+T+ ++ R M+ EIA+ +G+N Sbjct: 214 RDEITHLVVFQNIIKELKKENPELFTESMIEEFREMMRVGVEHEIAWGQYVTANEIMGIN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119 + Y+++++N+R IGLE L+ + T +P W+ L + +FFE +VT Y + Sbjct: 274 DQLIDAYIKYLSNQRLKAIGLEELYPEITTHPMAWIDSFSKLNNTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|90023100|ref|YP_528927.1| amino acid adenylation [Saccharophagus degradans 2-40] gi|89952700|gb|ABD82715.1| Class Ia ribonucleoside-diphosphate reductase beta subunit [Saccharophagus degradans 2-40] Length = 368 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 53/125 (42%), Positives = 71/125 (56%), Gaps = 4/125 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDE++H FGI ++QI IEN T +TM EA E YA + + +G Sbjct: 248 MRDETMHCAFGIQTVSQIIIENC---TNIDVDAIKTMWEEADEAEANYARYILREPILGY 304 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A + +FIANRR Q+GLE F + PW+ E +++KEKNFFETRV EYQ Sbjct: 305 SANDHIEQFRFIANRRARQLGLEEPFPQAKCALPWLDEQANIRKEKNFFETRVIEYQ-AG 363 Query: 121 ELKWD 125 L+WD Sbjct: 364 GLEWD 368 >gi|209170936|ref|YP_002268082.1| agip52 [Agrotis ipsilon multiple nucleopolyhedrovirus] gi|208436527|gb|ACI28754.1| ribonucleotide reductase-2B [Agrotis ipsilon multiple nucleopolyhedrovirus] Length = 313 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 8/123 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F E K +M EA +E + +P +G+N Sbjct: 191 RDEGLHTDFACLYYKTRVTE------KLDSDTILSMFKEAVAIEKEFFTAALPVELLGMN 244 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A S +Y++F+A+R Q+G F NPF +M+ I L+ + NFFE RV EY++ Sbjct: 245 AQSMCEYIEFVADRLLVQLGQPKYFN-ARNPFEFMN-NISLEGKTNFFEKRVGEYKRFGA 302 Query: 122 LKW 124 + Sbjct: 303 GED 305 >gi|269865524|ref|XP_002651954.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220063427|gb|EED42101.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] Length = 205 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + I + ++ EA +E + E++P +G+N Sbjct: 83 RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 133 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 QY++F+A+R +G + ++ + NPF +M E I L+ + NFFE R YQ+G Sbjct: 134 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 189 >gi|227501022|ref|ZP_03931071.1| ribonucleoside-diphosphate reductase [Anaerococcus tetradius ATCC 35098] gi|227216795|gb|EEI82193.1| ribonucleoside-diphosphate reductase [Anaerococcus tetradius ATCC 35098] Length = 352 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +IN +K E L+ E Q R ML E EIA+ + GLN Sbjct: 224 RDENTHLWLFRSLINDLKKEREDLFVPELQNYYRNMLKEGVEQEIAWGKYAIGNEIAGLN 283 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117 E Y++++ N R +GLE L++ W+ E D + +FFE +VT Y Sbjct: 284 EKMIEDYIKYLGNLRAKGLGLEALYEGFDEIPESMKWVDEYSDPNGVKTDFFEAKVTAYS 343 Query: 118 QGAELKWD 125 + + ++ D Sbjct: 344 KSSIIEDD 351 >gi|83649535|ref|YP_437970.1| ribonucleotide reductase subunit beta [Hahella chejuensis KCTC 2396] gi|83637578|gb|ABC33545.1| Ribonucleotide reductase, beta subunit [Hahella chejuensis KCTC 2396] Length = 405 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 52/124 (41%), Positives = 68/124 (54%), Gaps = 3/124 (2%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDE +H FGI V+ QI E + +T+ EA E YAH + + +G Sbjct: 285 MRDEVMHCAFGIRVVKQIIKEEGVTLDP---KAIKTLWEEAEAAETGYAHFLLKEPILGY 341 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A + +FIANRR Q+ L+ F N PW+ E ++KEKNFFETRVTEYQ GA Sbjct: 342 TAEDHIEQFRFIANRRAKQLKLDEPFPGAGNALPWLDEQASMRKEKNFFETRVTEYQTGA 401 Query: 121 ELKW 124 L+W Sbjct: 402 SLQW 405 >gi|88856487|ref|ZP_01131145.1| ribonucleotide-diphosphate reductase beta subunit [marine actinobacterium PHSC20C1] gi|88814354|gb|EAR24218.1| ribonucleotide-diphosphate reductase beta subunit [marine actinobacterium PHSC20C1] Length = 332 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 51/116 (43%), Positives = 75/116 (64%), Gaps = 1/116 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLHL FGI++I + ENP + T+EF + R M+ +A +E AY H+ +P G +GL Sbjct: 205 VRDESLHLKFGINLILTVLEENPEIQTEEFADEIRQMILDAVEMEEAYNHDLLPGGILGL 264 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 NA QY++++A+RR ++G EP +K T NP WM+ D + NFFE+ T Y Sbjct: 265 NANYINQYVKYLADRRLEELGFEPHYKVT-NPAKWMATANDTLELVNFFESTNTSY 319 >gi|297745764|emb|CBI15820.3| unnamed protein product [Vitis vinifera] Length = 269 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 R E LH +F + + ++ + P QK ++HEA +E + E +P +G+ Sbjct: 141 RYEGLHCDFACLLYSLLQKQLPW-------QKVHHIVHEAMEIETQFICEALPCALIGMK 193 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A Y++F+ +R +G E + ENPF WM E I L+ NFF+ R+ +YQ+ + Sbjct: 194 ATLMSHYIKFVVDRLLVALGYERKYN-VENPFDWM-EFIFLQGNANFFQRRMGDYQKASI 251 Query: 122 LK 123 + Sbjct: 252 MS 253 >gi|282860353|ref|ZP_06269421.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella bivia JCVIHMP010] gi|282586851|gb|EFB92088.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella bivia JCVIHMP010] Length = 347 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L+T E M+ E EIA+ + GL Sbjct: 219 RDENTHLWLFRNMIIELKQEEPELFTPEKVAIYEAMMREGVAQEIAWGQYVIGNEVQGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y++++ N R +G + LF+ + P W+++ + + +FFE + T Y Sbjct: 279 QQMVSDYIRYLGNLRWKSLGFDYLFEDNQTEPTDMEWVAQYSNANMVKTDFFEAKSTAYA 338 Query: 118 QGAELKWD 125 + L D Sbjct: 339 KSTALIDD 346 >gi|57239055|ref|YP_180191.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia ruminantium str. Welgevonden] gi|15811135|gb|AAL08816.1|AF308664_1 hypothetical ribonucleoside reductase beta chain [Ehrlichia ruminantium] gi|57161134|emb|CAH58047.1| putative ribonucleoside-diphosphate reductase beta chain [Ehrlichia ruminantium str. Welgevonden] Length = 324 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 42/127 (33%), Positives = 69/127 (54%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH I + N EN +W + +++ LE + + G G Sbjct: 192 VRDETLHTESIIRLFNTFIQENYEIWDDDLKKELYEACSVIVTLEDEFINLAFACGDVEG 251 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L+A ++Y+++IANRR Q+ LEP++ +NP W+ E+++ + NFFE RVTEY + Sbjct: 252 LSAQEVKEYIRYIANRRLIQLNLEPIYSANKNPLLWLDEILNGVEHTNFFENRVTEYTRA 311 Query: 120 A-ELKWD 125 A E W+ Sbjct: 312 ATEGTWE 318 >gi|68171256|ref|ZP_00544659.1| Ribonucleoside-diphosphate reductase [Ehrlichia chaffeensis str. Sapulpa] gi|67999338|gb|EAM85984.1| Ribonucleoside-diphosphate reductase [Ehrlichia chaffeensis str. Sapulpa] Length = 294 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH I + N EN +W +Q+ LE + + G G Sbjct: 162 VRDETLHTESIIRLFNTFIQENYEIWDDSLKQELYEACRIIVSLEDEFINLAFACGDVEG 221 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L++ ++Y+++IANRR Q+ LEP++ +NP W+ E+++ + NFFE RVTEY + Sbjct: 222 LSSKEVKEYIRYIANRRLLQLNLEPIYDTNKNPLLWLDEILNGVEHTNFFENRVTEYARA 281 Query: 120 A-ELKWD 125 A E W+ Sbjct: 282 ATEGTWE 288 >gi|90592764|ref|YP_529717.1| RR2B [Agrotis segetum nucleopolyhedrovirus] gi|71559214|gb|AAZ38213.1| RR2B [Agrotis segetum nucleopolyhedrovirus] Length = 313 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 8/123 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F N + K +M EA +E + +P +G+N Sbjct: 191 RDEGLHTDFACLYYNT------RVHDKLAPDTVLSMFKEAVAIEKEFFTAALPAALLGMN 244 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A S Y++F+A+R Q+ F + NPF +M+ I L+ + NFFE RV EY++ Sbjct: 245 AQSMCDYIEFVADRLLVQLHQPKHF-HARNPFEFMN-NISLEGKTNFFEKRVGEYKRFGA 302 Query: 122 LKW 124 Sbjct: 303 GDD 305 >gi|260591988|ref|ZP_05857446.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella veroralis F0319] gi|260536272|gb|EEX18889.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella veroralis F0319] Length = 348 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I ++K E P ++T+E + M+ E EIA+ + GLN Sbjct: 220 RDENTHLWLFRSIILELKKEEPDMFTEEKVKVYEDMMREGVRQEIAWGQYVIGNDVQGLN 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 + Y++++ N R +G L+ + P W+ + + + +FFE R T Y Sbjct: 280 SQMVSDYIRYLGNLRWSGLGFGFLYPDNQKEPENMKWVGQYSNANMVKTDFFEARSTAYA 339 Query: 118 QGAELKWD 125 + L D Sbjct: 340 KSTALIDD 347 >gi|58578998|ref|YP_197210.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia ruminantium str. Welgevonden] gi|58417624|emb|CAI26828.1| Ribonucleoside-diphosphate reductase beta chain [Ehrlichia ruminantium str. Welgevonden] Length = 329 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 42/127 (33%), Positives = 69/127 (54%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH I + N EN +W + +++ LE + + G G Sbjct: 197 VRDETLHTESIIRLFNTFIQENYEIWDDDLKKELYEACSVIVTLEDEFINLAFACGDVEG 256 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L+A ++Y+++IANRR Q+ LEP++ +NP W+ E+++ + NFFE RVTEY + Sbjct: 257 LSAQEVKEYIRYIANRRLIQLNLEPIYSANKNPLLWLDEILNGVEHTNFFENRVTEYTRA 316 Query: 120 A-ELKWD 125 A E W+ Sbjct: 317 ATEGTWE 323 >gi|317011285|gb|ADU85032.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori SouthAfrica7] Length = 341 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E ++ +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLIDEVIEMFKKAVEIEASWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKIY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 Query: 121 ELKWD 125 D Sbjct: 336 VSFDD 340 >gi|312599293|gb|ADQ91316.1| hypothetical protein BpV2_149c [Bathycoccus sp. RCC1105 virus BpV2] Length = 387 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 68/128 (53%), Gaps = 13/128 (10%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H F +++ N +K K + ++ +A +E + + +P +G+N Sbjct: 266 RDEGMHQEFAVELFNMLK-------NKPSGEIIEEIIRDAVTIEKEFITDALPCSLIGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ--- 118 + +Y++++A+R Q+G + ++ T+NPF +M E I L + NFFE RV +Y + Sbjct: 319 SSKMSEYIEYVADRLSKQVGHDKIWN-TKNPFDFM-ENISLDGKTNFFEKRVGDYGKMDE 376 Query: 119 -GAELKWD 125 +++D Sbjct: 377 DTTSIEFD 384 >gi|51891459|ref|YP_074150.1| ribonucleoside-diphosphate reductase beta subunit [Symbiobacterium thermophilum IAM 14863] gi|51855148|dbj|BAD39306.1| ribonucleoside-diphosphate reductase beta subunit [Symbiobacterium thermophilum IAM 14863] Length = 346 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 1/125 (0%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +++N ++ E P L+T + R M+ +A E+A+A + GL+ Sbjct: 220 RDEITHVAVFQNILNGLRQERPQLFTPQLDADLRAMIRQAAEHEMAWAAYCVGNRIQGLS 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQGA 120 + Y++ +A++R +G EPL+ NP W+ +L + +FFETRVT Y + Sbjct: 280 GEVLQGYVKHLADQRARALGFEPLYGNHPNPIKWVESFSNLNQTKADFFETRVTNYAKST 339 Query: 121 ELKWD 125 + D Sbjct: 340 NIDLD 344 >gi|307565004|ref|ZP_07627521.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella amnii CRIS 21A-A] gi|307346317|gb|EFN91637.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella amnii CRIS 21A-A] Length = 347 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P L+T E M+ E EIA+ + GL Sbjct: 219 RDENTHLWLFRNIIVELKQEEPDLFTPEKVAVYEEMMREGVRQEIAWGQYVIGNDVQGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y++++ N R +G + LF+ + P W+++ + + +FFE + T Y Sbjct: 279 QQMVYDYIRYLGNLRWKSLGFDYLFEDNQAEPADMQWVAQYSNANMVKTDFFEAKSTAYA 338 Query: 118 QGAELKWD 125 + L D Sbjct: 339 KSTALIDD 346 >gi|215401441|ref|YP_002332744.1| RR2b [Spodoptera litura nucleopolyhedrovirus II] gi|209483982|gb|ACI47415.1| RR2b [Spodoptera litura nucleopolyhedrovirus II] Length = 313 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 8/123 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH NF N + + T M EA +E+ + E +P+ VG+N Sbjct: 191 RDEGLHTNFACLYYNTRVDQKLDVPT------VSDMFAEAVAIEMEFFAEALPESLVGMN 244 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A +Y++F+A+R Q+ ++ +TENPF +M+ I L+ + NFFE RV EY++ Sbjct: 245 AEMMRKYIEFVADRLLVQLKYPKIY-HTENPFEFMN-NISLEGKTNFFEKRVGEYKRFGA 302 Query: 122 LKW 124 + Sbjct: 303 GED 305 >gi|187932511|ref|YP_001884520.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium botulinum B str. Eklund 17B] gi|187720664|gb|ACD21885.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum B str. Eklund 17B] Length = 344 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 42/126 (33%), Positives = 69/126 (54%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I +++ ENP +T + + + R M+H EI + H + G+N Sbjct: 218 RDENTHLWLFRNIIKELQSENPESFTADLKNELREMMHIGVENEILWGHYVIGDKIQGIN 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119 E Y++++ N+R +IGLEPLF Y ENP W+ V + + +FFE + T Y + Sbjct: 278 KKLIEDYIKYLGNKRLKEIGLEPLFSGYEENPATWVDVVANSNSVKTDFFEAKSTAYAKV 337 Query: 120 AELKWD 125 + L D Sbjct: 338 STLIDD 343 >gi|134301991|ref|YP_001121960.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Francisella tularensis subsp. tularensis WY96-3418] gi|134049768|gb|ABO46839.1| biofunctional glutaredoxin 3 protein/Ribonucleoside-diphosphate reductase beta subunit [Francisella tularensis subsp. tularensis WY96-3418] Length = 410 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDES+H+ + ENP++ EF+++ M +A LE + G G Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 338 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A +QY++ I +RR +Q+GL+ ++ +NP W+ +++ NFFE RVTEY+ Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398 Query: 120 A-ELKWD 125 WD Sbjct: 399 GLTGSWD 405 >gi|118497575|ref|YP_898625.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Francisella tularensis subsp. novicida U112] gi|195536272|ref|ZP_03079279.1| ribonucleoside-diphosphate reductase, beta subunit domain [Francisella tularensis subsp. novicida FTE] gi|208779374|ref|ZP_03246720.1| ribonucleoside-diphosphate reductase, beta subunit domain [Francisella novicida FTG] gi|254372936|ref|ZP_04988425.1| hypothetical protein FTCG_00507 [Francisella tularensis subsp. novicida GA99-3549] gi|118423481|gb|ABK89871.1| bifunctional protein: glutaredoxin 3 /ribonucleotide reductase beta subunit [Francisella novicida U112] gi|151570663|gb|EDN36317.1| hypothetical protein FTCG_00507 [Francisella novicida GA99-3549] gi|194372749|gb|EDX27460.1| ribonucleoside-diphosphate reductase, beta subunit domain [Francisella tularensis subsp. novicida FTE] gi|208745174|gb|EDZ91472.1| ribonucleoside-diphosphate reductase, beta subunit domain [Francisella novicida FTG] gi|332678274|gb|AEE87403.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Francisella cf. novicida Fx1] Length = 410 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDES+H+ + ENP++ EF+++ M +A LE + G G Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDKFIELAYELGTIEG 338 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A +QY++ I +RR +Q+GL+ ++ +NP W+ +++ NFFE RVTEY+ Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398 Query: 120 A-ELKWD 125 WD Sbjct: 399 GLTGSWD 405 >gi|302521843|ref|ZP_07274185.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces sp. SPB78] gi|302430738|gb|EFL02554.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces sp. SPB78] Length = 345 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 73/126 (57%), Gaps = 4/126 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F DV++ ++ E P L+ + + + + ML A E+ +A + G G+N Sbjct: 219 RDETMHMSFAFDVVDTVRKEEPELFDDKLEAEVKEMLAGAVDAELQFARDLCGDGLPGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119 S +Y+Q +A++R ++G P++ + NPF +M E+ +++ NFFE R + YQ Sbjct: 279 TESMREYLQCVADQRLVRLGFSPVY-GSSNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 336 Query: 120 AELKWD 125 + +D Sbjct: 337 GSVSFD 342 >gi|225873704|ref|YP_002755163.1| ribonucleoside-diphosphate reductase, beta subunit [Acidobacterium capsulatum ATCC 51196] gi|225791613|gb|ACO31703.1| ribonucleoside-diphosphate reductase, beta subunit [Acidobacterium capsulatum ATCC 51196] Length = 340 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 2/122 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES HL F +V+N ++ + P LW + + MLHEA E +A + + G GL+ Sbjct: 214 RDESCHLEFAFEVVNVVRSQEPDLWDAQLEADIVEMLHEAVDAETQFAEDLLSGGVAGLS 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 QY+ ++A+ R ++G+ P F +NPF +M E+ D+++ NFFE RV+ YQ Sbjct: 274 VRDMRQYLGYVADSRLQRLGIAPAF-GVKNPFSFM-ELQDVQELTNFFERRVSAYQTAVA 331 Query: 122 LK 123 + Sbjct: 332 GE 333 >gi|56707665|ref|YP_169561.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Francisella tularensis subsp. tularensis SCHU S4] gi|110670136|ref|YP_666693.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Francisella tularensis subsp. tularensis FSC198] gi|187931834|ref|YP_001891819.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Francisella tularensis subsp. mediasiatica FSC147] gi|224456732|ref|ZP_03665205.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Francisella tularensis subsp. tularensis MA00-2987] gi|254370173|ref|ZP_04986179.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874478|ref|ZP_05247188.1| nrdB, biofunctional protein, glutaredoxin 3 protein/ribonucleoside-diphosphate reductase, beta subunit [Francisella tularensis subsp. tularensis MA00-2987] gi|56604157|emb|CAG45165.1| Biofunctional protein, glutaredoxin 3 protein/Ribonucleoside-diphosphate reductase, beta subunit [Francisella tularensis subsp. tularensis SCHU S4] gi|110320469|emb|CAL08548.1| Biofunctional protein, glutaredoxin 3 protein/Ribonucleoside-diphosphate reductase, beta subunit [Francisella tularensis subsp. tularensis FSC198] gi|151568417|gb|EDN34071.1| hypothetical protein FTBG_01287 [Francisella tularensis subsp. tularensis FSC033] gi|187712743|gb|ACD31040.1| bifunctional protein: glutaredoxin 3/ribonucleotide reductase beta subunit [Francisella tularensis subsp. mediasiatica FSC147] gi|254840477|gb|EET18913.1| nrdB, biofunctional protein, glutaredoxin 3 protein/ribonucleoside-diphosphate reductase, beta subunit [Francisella tularensis subsp. tularensis MA00-2987] gi|282158827|gb|ADA78218.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Francisella tularensis subsp. tularensis NE061598] Length = 410 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDES+H+ + ENP++ EF+++ M +A LE + G G Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 338 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A +QY++ I +RR +Q+GL+ ++ +NP W+ +++ NFFE RVTEY+ Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398 Query: 120 A-ELKWD 125 WD Sbjct: 399 GLTGSWD 405 >gi|318060206|ref|ZP_07978929.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SA3_actG] gi|318077113|ref|ZP_07984445.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SA3_actF] gi|333024515|ref|ZP_08452579.1| putative ribonucleoside-diphosphate reductase beta chain [Streptomyces sp. Tu6071] gi|332744367|gb|EGJ74808.1| putative ribonucleoside-diphosphate reductase beta chain [Streptomyces sp. Tu6071] Length = 345 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 73/126 (57%), Gaps = 4/126 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H++F DV++ ++ E P L+ + + + + ML A E+ +A + G G+N Sbjct: 219 RDETMHMSFAFDVVDTVRKEEPELFDDKLEAEVKEMLAGAVDAELQFARDLCGDGLPGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119 S +Y+Q +A++R ++G P++ + NPF +M E+ +++ NFFE R + YQ Sbjct: 279 TESMREYLQCVADQRLVRLGFSPVY-GSSNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 336 Query: 120 AELKWD 125 + +D Sbjct: 337 GSVSFD 342 >gi|254374389|ref|ZP_04989871.1| glutaredoxin [Francisella novicida GA99-3548] gi|151572109|gb|EDN37763.1| glutaredoxin [Francisella novicida GA99-3548] Length = 410 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDES+H+ + ENP++ EF+++ M +A LE + G G Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDKFIELAYELGTIEG 338 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A +QY++ I +RR +Q+GL+ ++ +NP W+ +++ NFFE RVTEY+ Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398 Query: 120 A-ELKWD 125 WD Sbjct: 399 GLTGSWD 405 >gi|314055235|ref|YP_004063573.1| ribonucleoside-diphosphate reductase small subunit-possible host origin [Ostreococcus tauri virus 2] gi|313575126|emb|CBI70139.1| ribonucleoside-diphosphate reductase small subunit-possible host origin [Ostreococcus tauri virus 2] Length = 408 Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 33/124 (26%), Positives = 65/124 (52%), Gaps = 12/124 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH F +++ ++ + + ++ EA +E + + +P +G+N Sbjct: 287 RDEGLHQEFAVELFKTLR-------NRPTTETIHAIVKEAVEIEKGFILDALPCNLIGMN 339 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +Y++++++R Q+G+ P++ +NPF +M E I L + NFFE RV +Y + Sbjct: 340 SEKMSEYIEYVSDRLLKQVGVPPIWN-AKNPFDFM-ENISLDGKTNFFEKRVGDY---GK 394 Query: 122 LKWD 125 L D Sbjct: 395 LDDD 398 >gi|254369307|ref|ZP_04985319.1| hypothetical protein FTAG_00272 [Francisella tularensis subsp. holarctica FSC022] gi|157122257|gb|EDO66397.1| hypothetical protein FTAG_00272 [Francisella tularensis subsp. holarctica FSC022] Length = 410 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDES+H+ + ENP++ EF+++ M +A LE + G G Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 338 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A +QY++ I +RR +Q+GL+ ++ +NP W+ +++ NFFE RVTEY+ Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398 Query: 120 A-ELKWD 125 WD Sbjct: 399 GLTGSWD 405 >gi|73666936|ref|YP_302952.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia canis str. Jake] gi|72394077|gb|AAZ68354.1| Ribonucleoside-diphosphate reductase [Ehrlichia canis str. Jake] Length = 324 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH I + N EN +W + + LE + + G G Sbjct: 192 VRDETLHTESIIRLFNTFVQENYEIWDDSLKHELYEACKIIVSLEDEFINLAFACGDVEG 251 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L+A ++Y+++IANRR Q+ LEP++ +NP W+ E+++ + NFFE RVTEY + Sbjct: 252 LSAKEVKKYIRYIANRRLLQLNLEPIYDANKNPLLWLDEILNGVEHTNFFENRVTEYARA 311 Query: 120 A-ELKWD 125 A E W+ Sbjct: 312 ATEGTWE 318 >gi|89256330|ref|YP_513692.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Francisella tularensis subsp. holarctica LVS] gi|115314778|ref|YP_763501.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Francisella tularensis subsp. holarctica OSU18] gi|156502403|ref|YP_001428469.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010840|ref|ZP_02275771.1| ribonucleotide-diphosphate reductase beta subunit [Francisella tularensis subsp. holarctica FSC200] gi|254367665|ref|ZP_04983686.1| biofunctional protein: glutaredoxin 3 protein-ribonucleoside-diphosphate reductase, beta subunit [Francisella tularensis subsp. holarctica 257] gi|290952877|ref|ZP_06557498.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Francisella tularensis subsp. holarctica URFT1] gi|295313922|ref|ZP_06804487.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Francisella tularensis subsp. holarctica URFT1] gi|89144161|emb|CAJ79423.1| Biofunctional protein, glutaredoxin 3 protein/Ribonucleoside-diphosphate reductase, beta subunit [Francisella tularensis subsp. holarctica LVS] gi|115129677|gb|ABI82864.1| ribonucleoside-diphosphate reductase [Francisella tularensis subsp. holarctica OSU18] gi|134253476|gb|EBA52570.1| biofunctional protein: glutaredoxin 3 protein-ribonucleoside-diphosphate reductase, beta subunit [Francisella tularensis subsp. holarctica 257] gi|156253006|gb|ABU61512.1| bifunctional glutaredoxin /ribonucleoside-diphosphate reductase beta subunit [Francisella tularensis subsp. holarctica FTNF002-00] Length = 410 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDES+H+ + ENP++ EF+++ M +A LE + G G Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 338 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A +QY++ I +RR +Q+GL+ ++ +NP W+ +++ NFFE RVTEY+ Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398 Query: 120 A-ELKWD 125 WD Sbjct: 399 GLTGSWD 405 >gi|288928561|ref|ZP_06422408.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp. oral taxon 317 str. F0108] gi|288331395|gb|EFC69979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp. oral taxon 317 str. F0108] Length = 348 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I+++K E P +T E + M+ E EIA+ + GLN Sbjct: 220 RDENTHLWLFRNIIHEMKKEEPEYFTPEKVKVYEEMMREGVRQEIAWGQYVIGDEVQGLN 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 A Y++++ N R +G L + E P W+++ + + +FFE + T Y Sbjct: 280 AQMVNDYIRYLGNMRWRSLGFGNLLEDNIEEPENMRWVAQYANANMVKTDFFEAKSTAYA 339 Query: 118 QGAELKWD 125 + ++ D Sbjct: 340 KSTAIEDD 347 >gi|311898297|dbj|BAJ30705.1| putative ribonucleoside-diphosphate reductase subunit beta [Kitasatospora setae KM-6054] Length = 339 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 41/126 (32%), Positives = 75/126 (59%), Gaps = 4/126 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES+H++F V++ ++ E P L+ + ++ ML EA E+ +A + +G G+N Sbjct: 213 RDESMHMDFAFSVVDTVREEEPDLFDDKMARQVTEMLEEAVEAELQFARDLCGEGLPGMN 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119 S +Y+Q +A++R ++GL P+ + NPF +M E+ ++++ NFFE RV+ YQ Sbjct: 273 TESMREYLQAVADQRLARLGL-PIRYGSTNPFGFM-ELQNVQELTNFFERRVSAYQIAVE 330 Query: 120 AELKWD 125 + +D Sbjct: 331 GSVSFD 336 >gi|304439119|ref|ZP_07399038.1| ribonucleotide-diphosphate reductase beta subunit [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372478|gb|EFM26065.1| ribonucleotide-diphosphate reductase beta subunit [Peptoniphilus duerdenii ATCC BAA-1640] Length = 347 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +K E P L+T+E ++ R +L EIA+ + GL Sbjct: 219 RDENTHLWLFRSIILDLKKEQPELFTEEKVEEYRALLKYGVEEEIAWGKYVIGDDIQGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLK-KEKNFFETRVTEYQ 117 + E Y++++ N R +G EPL++ + W+++ D+ + +FFE +VT Y Sbjct: 279 SKMVEDYIKYLGNLRATNLGFEPLYEGYDKEVESMKWVTQYADINLLKTDFFEAKVTAYS 338 Query: 118 QGAELKWD 125 + A ++ D Sbjct: 339 KSAIIEDD 346 >gi|257792030|ref|YP_003182636.1| ribonucleotide-diphosphate reductase subunit beta [Eggerthella lenta DSM 2243] gi|317488666|ref|ZP_07947206.1| ribonucleotide reductase [Eggerthella sp. 1_3_56FAA] gi|257475927|gb|ACV56247.1| Ribonucleoside-diphosphate reductase [Eggerthella lenta DSM 2243] gi|316912225|gb|EFV33794.1| ribonucleotide reductase [Eggerthella sp. 1_3_56FAA] Length = 347 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +++ ++K E P L+ E ++ R M+ E EI + H + GLN Sbjct: 219 RDENTHLWLFRNILLELKEEEPELFAPELVEEYRAMIKEGCEQEIRWGHYAIGDDVAGLN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y+Q++ N RC Q+G EPL++ E W+S+ + + +FFE R T Y Sbjct: 279 KQMVTDYIQYLGNLRCAQLGFEPLYEGHEREPESMSWVSQFSNANMIKTDFFEARSTAYA 338 Query: 118 QGAELKWD 125 + + L D Sbjct: 339 KSSALVDD 346 >gi|57339646|gb|AAW49810.1| hypothetical protein FTT0532 [synthetic construct] Length = 445 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDES+H+ + ENP++ EF+++ M +A LE + G G Sbjct: 305 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 364 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A +QY++ I +RR +Q+GL+ ++ +NP W+ +++ NFFE RVTEY+ Sbjct: 365 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 424 Query: 120 A-ELKWD 125 WD Sbjct: 425 GLTGSWD 431 >gi|189184364|ref|YP_001938149.1| ribonucleotide-diphosphate reductase subunit beta [Orientia tsutsugamushi str. Ikeda] gi|189181135|dbj|BAG40915.1| ribonucleoside-diphosphate reductase beta chain [Orientia tsutsugamushi str. Ikeda] Length = 359 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH N I + E P +WT++ + + E A+ G G Sbjct: 204 VRDETLHTNSIITLFKTFIQEYPEVWTEQLKSRIYEACCTIIHFEDAFIDLAFEVGGVEG 263 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A ++Y+++IA+RR Q+GL+ + +NP W+ ++++ + NFFE RVTEY + Sbjct: 264 LEARDVKKYIRYIADRRLLQLGLKENYLIEQNPLTWLDQILNGVEHTNFFENRVTEYTRS 323 Query: 120 A-ELKWD 125 A WD Sbjct: 324 ATTGSWD 330 >gi|317014473|gb|ADU81909.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori Gambia94/24] Length = 341 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E ++ +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKIY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 Query: 121 ELKWD 125 D Sbjct: 336 VSFDD 340 >gi|311696539|gb|ADP99412.1| ribonucleotide-diphosphate reductase beta subunit [marine bacterium HP15] Length = 352 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 3/124 (2%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H +FG+ V+NQI E + + R M E+ E AYA + +G Sbjct: 232 LRDEAMHFSFGLKVVNQIVEEENITFDP---KAVREMWDESEAAEKAYADYILRDPILGY 288 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A + +F+ANRR +GLE F +N PW+ E L+KEKNFFETRV EYQ GA Sbjct: 289 SAEYHSEQFRFVANRRARTVGLEEPFPGAKNVSPWLDEQATLRKEKNFFETRVIEYQTGA 348 Query: 121 ELKW 124 +L+W Sbjct: 349 QLEW 352 >gi|288801822|ref|ZP_06407264.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella melaninogenica D18] gi|302344783|ref|YP_003813136.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella melaninogenica ATCC 25845] gi|288335864|gb|EFC74297.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella melaninogenica D18] gi|302149273|gb|ADK95535.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella melaninogenica ATCC 25845] Length = 348 Score = 140 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I ++K E P ++T E + M+ E EIA+ + GLN Sbjct: 220 RDENTHLWLFRSIILELKKEEPDMFTPEKIKVYEDMMREGVRQEIAWGQYVIGNDVQGLN 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 A Y++++ N R +G L+ + P W+ + + + +FFE + T Y Sbjct: 280 AQMVSDYIRYLGNLRWSGLGFGFLYDDNQKEPENMKWVGQYSNANMVKTDFFEAKSTAYA 339 Query: 118 QGAELKWD 125 + L D Sbjct: 340 KSTALIDD 347 >gi|47208564|emb|CAF96041.1| unnamed protein product [Tetraodon nigroviridis] Length = 352 Score = 140 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 37/150 (24%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEI--------------- 46 RDE LH F + + + K + + + ++ +A +E Sbjct: 199 RDEGLHCTFACLLYSYLVK-------KPSEDRVKDIITKAVSIEQVGGSYRSMDGNKPNR 251 Query: 47 -------------AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF 93 + E +P +G+N +QY++F+A+R +GL ++ ENPF Sbjct: 252 EVLIKDATCFCLQEFLTEALPVDLIGMNRCLMKQYIEFVADRLFADLGLAKMYN-AENPF 310 Query: 94 PWMSEVIDLKKEKNFFETRVTEYQQGAELK 123 +M E I L+ + NFFE RV EYQ+ + Sbjct: 311 DFM-EAISLEGKTNFFEKRVAEYQRFGIMS 339 >gi|296271635|ref|YP_003654266.1| ribonucleoside-diphosphate reductase [Arcobacter nitrofigilis DSM 7299] gi|296095810|gb|ADG91760.1| Ribonucleoside-diphosphate reductase [Arcobacter nitrofigilis DSM 7299] Length = 339 Score = 140 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN + E P L+T E + K R M +A LE A+ +G Sbjct: 215 RDEVTHLLLFQNMINSTRKERPDLFTPELEVKVRAMFRKAVELEAAWGAYITQGQILGFT 274 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 QY+Q++A++R +G +P + ++P PW+ + NFFE V Y +G+ Sbjct: 275 DGIITQYIQYLADKRLDAVGYKPEYN-VKHPIPWVDGYSSFNDQRTNFFEGNVVNYSKGS 333 Query: 121 ELKWD 125 + +D Sbjct: 334 -IDFD 337 >gi|308184827|ref|YP_003928960.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori SJM180] gi|308060747|gb|ADO02643.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori SJM180] Length = 341 Score = 140 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E+++ +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEVSWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 Query: 121 ELKWD 125 D Sbjct: 336 VSFDD 340 >gi|229827460|ref|ZP_04453529.1| hypothetical protein GCWU000182_02849 [Abiotrophia defectiva ATCC 49176] gi|229788398|gb|EEP24512.1| hypothetical protein GCWU000182_02849 [Abiotrophia defectiva ATCC 49176] Length = 354 Score = 140 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I ++ ENP ++T E + + R M+ TL EI + +G+N Sbjct: 226 RDEITHLVLFQNIIRELMKENPEIFTDELKGELREMVKVGTLNEIEWGQYVTNNEILGIN 285 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119 E+Y+++++N R IGL F + TENP W+ +L + +FFE +VT Y + Sbjct: 286 NELIERYIKYLSNLRLRAIGLPVWFPEITENPMAWIESFSNLNATKTDFFEAKVTNYTKA 345 Query: 120 AELKWD 125 A +D Sbjct: 346 AAFDFD 351 >gi|315586979|gb|ADU41360.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter pylori 35A] Length = 341 Score = 140 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E ++ +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 Query: 121 ELKWD 125 D Sbjct: 336 VSFDD 340 >gi|302386033|ref|YP_003821855.1| ribonucleotide reductase [Clostridium saccharolyticum WM1] gi|302196661|gb|ADL04232.1| ribonucleotide reductase [Clostridium saccharolyticum WM1] Length = 368 Score = 140 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I +++ E P L+++E + RTM+ E EIA+ + GL Sbjct: 240 RDENTHLWLFRNIILELEKEEPKLFSRERIEVYRTMIKEGCEQEIAWGCYAIGDEVPGLT 299 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y+ ++ N RC +G +++ + + P W+++ + + +FFE + T Y Sbjct: 300 KEMITDYIMYLGNLRCASLGWGRIYEGHDKEPESMSWVNQFSNANLIKTDFFEAKSTAYA 359 Query: 118 QGAELKWD 125 + + L D Sbjct: 360 KSSALLDD 367 >gi|120556760|ref|YP_961111.1| ribonucleoside-diphosphate reductase [Marinobacter aquaeolei VT8] gi|120326609|gb|ABM20924.1| Ribonucleoside-diphosphate reductase [Marinobacter aquaeolei VT8] Length = 352 Score = 140 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 3/124 (2%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H +FG+ V+NQI E + R M E+ E+AYA+ + +G Sbjct: 232 LRDEAMHFSFGLKVVNQILEEEKITLDP---KAVREMWDESEAAEMAYANYVLRDPILGY 288 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A + +F+ANRR +GLE F +N PW+ E L+KEKNFFETRV EYQ GA Sbjct: 289 SAEYHSEQFRFVANRRARTVGLEEPFPGAKNVSPWLDEQATLRKEKNFFETRVIEYQTGA 348 Query: 121 ELKW 124 +L+W Sbjct: 349 QLEW 352 >gi|148284015|ref|YP_001248105.1| ribonucleotide-diphosphate reductase subunit beta [Orientia tsutsugamushi str. Boryong] gi|146739454|emb|CAM79093.1| ribonucleoside-diphosphate reductase beta chain [Orientia tsutsugamushi str. Boryong] Length = 329 Score = 140 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH N I + E P +WT++ + + E A+ G G Sbjct: 189 VRDETLHTNSIITLFKTFIQEYPEVWTEQLKSRIYEACCTIIHFEDAFIDLAFEVGGVEG 248 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A ++Y+++IA+RR Q+GL+ + +NP W+ ++++ + NFFE RVTEY + Sbjct: 249 LEARDVKKYIRYIADRRLLQLGLKENYLIEQNPLTWLDQILNGVEHTNFFENRVTEYTRS 308 Query: 120 A-ELKWD 125 A WD Sbjct: 309 ATTGSWD 315 >gi|58617056|ref|YP_196255.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia ruminantium str. Gardel] gi|58416668|emb|CAI27781.1| Ribonucleoside-diphosphate reductase beta chain [Ehrlichia ruminantium str. Gardel] Length = 329 Score = 140 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 42/127 (33%), Positives = 69/127 (54%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH I + N EN +W + +++ LE + + G G Sbjct: 197 VRDETLHTESIIRLFNTFIQENYEIWDGDLKKELYEACSVIVTLEDEFINLAFACGDVEG 256 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L+A ++Y+++IANRR Q+ LEP++ +NP W+ E+++ + NFFE RVTEY + Sbjct: 257 LSAQEVKEYIRYIANRRLIQLNLEPIYSANKNPLLWLDEILNGVEHTNFFENRVTEYTRA 316 Query: 120 A-ELKWD 125 A E W+ Sbjct: 317 ATEGTWE 323 >gi|254779643|ref|YP_003057749.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori B38] gi|254001555|emb|CAX29573.1| Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide reductase small subunit) [Helicobacter pylori B38] Length = 341 Score = 140 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E ++ +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 Query: 121 ELKWD 125 D Sbjct: 336 VSFDD 340 >gi|332184137|gb|AEE26391.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Francisella cf. novicida 3523] Length = 410 Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDES+H+ + ENP++ +F+++ M +A LE + G G Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNQFKKEIYLMASKAVELEDKFIELAYELGTIEG 338 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A +QY++ I +RR +Q+GL+ ++ +NP W+ +++ NFFE RVTEY+ Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398 Query: 120 A-ELKWD 125 WD Sbjct: 399 GLTGSWD 405 >gi|15612081|ref|NP_223733.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori J99] gi|11387046|sp|Q9ZKC3|RIR2_HELPJ RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit gi|4155613|gb|AAD06604.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 BETA CHAIN [Helicobacter pylori J99] gi|307637755|gb|ADN80205.1| Ribonucleotide reductase of classIa beta subunit [Helicobacter pylori 908] gi|325996356|gb|ADZ51761.1| Ribonucleotide reductase of class Ia beta subunit [Helicobacter pylori 2018] gi|325997944|gb|ADZ50152.1| Ribonucleosidase diphosphate reductase beta subunit [Helicobacter pylori 2017] Length = 341 Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E ++ +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 Query: 121 ELKWD 125 D Sbjct: 336 VSFDD 340 >gi|269866693|ref|XP_002652360.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220062665|gb|EED41696.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] Length = 211 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + I + ++ EA +E + E++P +G+N Sbjct: 89 RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 139 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 QY++F+A+R +G + ++ + NPF +M E I L+ + NFFE R YQ+G Sbjct: 140 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 195 >gi|313768358|ref|YP_004062038.1| hypothetical protein MpV1_155c [Micromonas sp. RCC1109 virus MpV1] gi|312599054|gb|ADQ91078.1| hypothetical protein MpV1_155c [Micromonas sp. RCC1109 virus MpV1] Length = 388 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 34/124 (27%), Positives = 66/124 (53%), Gaps = 12/124 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH F +++ ++ K + +++ EA +E + + +P +G+N Sbjct: 267 RDEGLHQEFAVELFKLLR-------NKPSTETIHSIVKEAVEIEKNFILDALPCNLIGMN 319 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +Y++++++R Q+G P++ ++NPF +M E I L + NFFE RV +Y + Sbjct: 320 SEKMSEYIEYVSDRLLKQVGQPPIWN-SKNPFDFM-ENISLDGKTNFFEKRVGDY---GK 374 Query: 122 LKWD 125 L D Sbjct: 375 LDDD 378 >gi|332297025|ref|YP_004438947.1| ribonucleotide reductase [Treponema brennaborense DSM 12168] gi|332180128|gb|AEE15816.1| ribonucleotide reductase [Treponema brennaborense DSM 12168] Length = 346 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E P ++T+E ML E EI + + GL Sbjct: 218 RDENTHLWLFKNIILELKKERPDMFTEEKVASYAEMLKEGVRQEIEWGEYVIGDDIPGLT 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y+ ++ N R + PL+ P W+S + + +FFE R T Y Sbjct: 278 RKMVRDYITYLGNLRWTNLDFPPLYPGFDTEPEDMAWVSAYSNANMVKTDFFEARSTAYA 337 Query: 118 QGAELKWD 125 + L D Sbjct: 338 KSTALVDD 345 >gi|269865627|ref|XP_002651990.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220063361|gb|EED42066.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] Length = 290 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 11/118 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + I + ++ EA +E + E++P +G+N Sbjct: 168 RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 218 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 QY++F+A+R +G + ++ + NPF +M E I L+ + NFFE R T YQ+G Sbjct: 219 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERRETNYQKG 274 >gi|114568952|ref|YP_755632.1| ribonucleotide-diphosphate reductase subunit beta [Maricaulis maris MCS10] gi|114339414|gb|ABI64694.1| Ribonucleoside-diphosphate reductase [Maricaulis maris MCS10] Length = 345 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 2/122 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDESLH I + + E L T+E + LE + G G Sbjct: 197 IRDESLHCEGMIKLFHAFAEETGAL-TQEVKDDITECCRTVVGLEDKFIDLAFEAGDVEG 255 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + + Y+++IA+ R Q+GL ++ E+P PW+SE+++ + NFFE R TEY +G Sbjct: 256 MTPDDIKTYIRYIADWRLGQLGLPKIYGVKEHPLPWLSEILNGVEHANFFEARATEYSKG 315 Query: 120 AE 121 A Sbjct: 316 AT 317 >gi|94495782|ref|ZP_01302361.1| ribonucleotide reductase beta subunit [Sphingomonas sp. SKA58] gi|94424474|gb|EAT09496.1| ribonucleotide reductase beta subunit [Sphingomonas sp. SKA58] Length = 350 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 2/122 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH + + + E L T + M + +E A+ G G Sbjct: 189 VRDETLHCEGIVRLFHAFVKERDCL-TASVKDDIMDMCQKTVRIEDAFVDLVFEMGPVPG 247 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + ++Y+++IA+ R Q+GL+P++ E+P PW++ +++ + NFFETR TEY + Sbjct: 248 MTPKDIKKYVRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANFFETRSTEYSKA 307 Query: 120 AE 121 A Sbjct: 308 AT 309 >gi|271967540|ref|YP_003341736.1| ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM 43021] gi|270510715|gb|ACZ88993.1| Ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM 43021] Length = 331 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 70/126 (55%), Gaps = 4/126 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES+H+ F V++ ++ E P L+ + + M+ EA E+A+A + G G+N Sbjct: 205 RDESMHMEFAFSVVDTVRAEEPDLFDDKLGAQVTQMIEEAVEAELAFAADLCGDGMSGMN 264 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119 QY++++A++R ++ + T NPF +M E+ D+++ NFFE RV+ YQ Sbjct: 265 VEQMRQYLEYVADQRLVRLRFPVRY-GTANPFAFM-ELQDVQELANFFERRVSAYQVAVE 322 Query: 120 AELKWD 125 + +D Sbjct: 323 GNVSFD 328 >gi|309775830|ref|ZP_07670824.1| ribonucleoside-diphosphate reductase, beta subunit [Erysipelotrichaceae bacterium 3_1_53] gi|308916368|gb|EFP62114.1| ribonucleoside-diphosphate reductase, beta subunit [Erysipelotrichaceae bacterium 3_1_53] Length = 347 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +++ E PHL+T+E Q+ + ML EI + + GL Sbjct: 219 RDENTHLWLFRSMILELQKEEPHLFTEELIQEYKDMLRHGVEEEIRWGEYVIGNNIEGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y+ ++ N R + +G L++ E W+S + + +FFE R + Y Sbjct: 279 MEMVSDYIHYLGNLRSNSLGFGSLYEGFESEPKSMEWVSMYANANLIKTDFFEARSSAYA 338 Query: 118 QGAELKWD 125 + + L D Sbjct: 339 KSSALVDD 346 >gi|145596896|ref|YP_001161193.1| ribonucleoside-diphosphate reductase [Salinispora tropica CNB-440] gi|145306233|gb|ABP56815.1| Ribonucleoside-diphosphate reductase [Salinispora tropica CNB-440] Length = 350 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 42/126 (33%), Positives = 77/126 (61%), Gaps = 4/126 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES+H+ F DV++ ++ E P L+ + +++ + M+ EA E+ +A + + +G GL+ Sbjct: 224 RDESMHMAFAFDVVDTVRAEEPDLFDADLERQVKEMVAEAVDCEVQFAEDLLEQGVSGLS 283 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119 +Y+Q +A+RR +G+ P++ NPF +M E+ D+++ NFFE RV+ YQ G Sbjct: 284 LADMREYLQHVADRRLVTLGIAPMYGSA-NPFAFM-ELQDVQELSNFFERRVSAYQMGVS 341 Query: 120 AELKWD 125 + +D Sbjct: 342 GSVTFD 347 >gi|288817346|ref|YP_003431693.1| ribonucleotide reductase beta subunit [Hydrogenobacter thermophilus TK-6] gi|288786745|dbj|BAI68492.1| ribonucleotide reductase beta subunit [Hydrogenobacter thermophilus TK-6] gi|308750953|gb|ADO44436.1| ribonucleotide reductase [Hydrogenobacter thermophilus TK-6] Length = 342 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++I IK ENP L+T E ++ AT EI + +G+N Sbjct: 218 RDELTHVTLFRNIIQTIKQENPELFTPELEKWVYEFFKYATDAEIKWGQYVTQNQILGIN 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119 ++Y++++AN R Q+G +PL+ + TENP W+ + + + +FF+ + Y + Sbjct: 278 NTLIDRYIKYLANLRLTQLGYKPLYPEITENPMKWIDQFRTINDTKTDFFQAKPQTYAKR 337 Query: 120 AELKW 124 +ELKW Sbjct: 338 SELKW 342 >gi|319936387|ref|ZP_08010803.1| ribonucleotide-diphosphate reductase subunit beta [Coprobacillus sp. 29_1] gi|319808502|gb|EFW05054.1| ribonucleotide-diphosphate reductase subunit beta [Coprobacillus sp. 29_1] Length = 346 Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I +++ E P L+T + + R M+ EIA+ + GL Sbjct: 218 RDENTHLWLFRNMILELQKEEPDLFTPDKIEVYRDMMKRGVEEEIAWGQYVLGDRIEGLT 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y+ ++ N R + EPLF+ W+S + + +FFE R + Y Sbjct: 278 MKMVSDYIHYLGNFRAQALNFEPLFEDYMQEPESMKWVSIYSNANDIKTDFFEARSSAYA 337 Query: 118 QGAELKWD 125 + + L+ D Sbjct: 338 KSSALEDD 345 >gi|317012862|gb|ADU83470.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori Lithuania75] Length = 341 Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E ++ +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 Query: 121 ELKWD 125 D Sbjct: 336 VSFDD 340 >gi|254492407|ref|ZP_05105579.1| ribonucleoside-diphosphate reductase, beta subunit [Methylophaga thiooxidans DMS010] gi|224462299|gb|EEF78576.1| ribonucleoside-diphosphate reductase, beta subunit [Methylophaga thiooxydans DMS010] Length = 383 Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats. Identities = 50/125 (40%), Positives = 65/125 (52%), Gaps = 3/125 (2%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDE +H +FGI V QI E +K + M EA E YA + +G Sbjct: 262 MRDEVMHASFGIRVCKQIMKEENITLDP---KKVQQMFEEADAAEETYAGYILRDPILGY 318 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + ++ ANRR Q+G E F E PW+ E +++KEKNFFET+VTEYQ G Sbjct: 319 SKEVHHGQFRYTANRRAKQLGFEEPFPGAEATLPWLDEQANMRKEKNFFETKVTEYQTGG 378 Query: 121 ELKWD 125 LKWD Sbjct: 379 GLKWD 383 >gi|118474076|ref|YP_891239.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter fetus subsp. fetus 82-40] gi|118413302|gb|ABK81722.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter fetus subsp. fetus 82-40] Length = 340 Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats. Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+T E + K M +A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFTSEVEAKIYEMFKKAGDLEIEWGKYITGNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 E+Y+ ++ + R IGL+ L+ ++P W+ + +K NFFE++VT Y +G+ Sbjct: 276 DDIIEEYIHYLVDDRLTSIGLKKLYN-AKHPIKWVDDFAKFNDQKSNFFESKVTNYSKGS 334 Query: 121 ELKWD 125 L +D Sbjct: 335 -LTFD 338 >gi|307295356|ref|ZP_07575195.1| Ribonucleoside-diphosphate reductase [Sphingobium chlorophenolicum L-1] gi|306878859|gb|EFN10078.1| Ribonucleoside-diphosphate reductase [Sphingobium chlorophenolicum L-1] Length = 351 Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 2/122 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH I + + E L T + M + +E A+ G G Sbjct: 189 VRDETLHCEGIIRLFHAFVKERDCL-TASVKDDIMDMCQKTVRIEDAFIDLVFEMGPVPG 247 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + ++Y+++IA+ R Q+GL+P++ E+P PW++ +++ + NFFETR TEY + Sbjct: 248 MTPKDIKKYVRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANFFETRATEYSKA 307 Query: 120 AE 121 A Sbjct: 308 AT 309 >gi|109947017|ref|YP_664245.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter acinonychis str. Sheeba] gi|109714238|emb|CAJ99246.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter acinonychis str. Sheeba] Length = 341 Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E ++ +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLIDEVIEMFKKAVKIEASWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKIY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 Query: 121 ELKWD 125 D Sbjct: 336 VSFDD 340 >gi|315635423|ref|ZP_07890689.1| ribonucleotide-diphosphate reductase beta subunit [Arcobacter butzleri JV22] gi|315480181|gb|EFU70848.1| ribonucleotide-diphosphate reductase beta subunit [Arcobacter butzleri JV22] Length = 339 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+T+E ++ R M +A LE ++ +G Sbjct: 215 RDEVTHLLLFQNMINSVRKERPDLFTQELEETVRAMFRKAVDLEASWGAYITQGQILGFT 274 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 QY++++A+RR +G + + ++P PW+ + NFFE V Y +G+ Sbjct: 275 DGIIRQYIEYLADRRLEAVGYKAEY-GVKHPIPWVDGYASFNDQRTNFFEGNVVNYSKGS 333 Query: 121 ELKWD 125 + +D Sbjct: 334 -IDFD 337 >gi|313900116|ref|ZP_07833616.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp. HGF2] gi|312955168|gb|EFR36836.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp. HGF2] Length = 347 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +++ E P L+T+E ++ + ML EI + + GL Sbjct: 219 RDENTHLWLFRSMILELQKEEPQLFTEELIEEYKDMLRHGVEEEIRWGEYVIGNHIEGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y+ ++ N R + +G L+ EN W+S + + +FFE R + Y Sbjct: 279 MEMVSDYIHYLGNLRSNSLGFGSLYDGFENEPKSMEWVSMYANANLIKTDFFEARSSAYA 338 Query: 118 QGAELKWD 125 + + L D Sbjct: 339 KSSALVDD 346 >gi|229816571|ref|ZP_04446870.1| hypothetical protein COLINT_03629 [Collinsella intestinalis DSM 13280] gi|229807906|gb|EEP43709.1| hypothetical protein COLINT_03629 [Collinsella intestinalis DSM 13280] Length = 352 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +++ E P L++ E R ML E EIA+ + GL Sbjct: 224 RDENTHLWLFRSIILELQKEEPQLFSNENVTMLREMLEEGVRQEIAWGRYVLGDAIPGLT 283 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 E Y++++ N R +G L++ Y P W+S+ + + +FFE + T Y Sbjct: 284 GDMVEGYIKYLGNLRWSSLGFGQLYEGYRTEPADMAWVSQYSNANMVKTDFFEAKSTAYA 343 Query: 118 QGAELKWD 125 + L D Sbjct: 344 KSTALVDD 351 >gi|165969130|ref|YP_001651030.1| ribonucleotide reductase small subunit 2 [Orgyia leucostigma NPV] gi|164663626|gb|ABY65846.1| ribonucleotide reductase small subunit 2 [Orgyia leucostigma NPV] Length = 339 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 6/123 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH NF N+ E + + E M EA +E + +P +G+N Sbjct: 215 RDEGLHTNFACLYYNEYIDERDKMSSAE----ILDMFVEAVNIEKEFFTSALPCDLLGMN 270 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + + +Y++F+A+R ++ F T NPF +M+ I L+ + NFFE RV EY++ Sbjct: 271 SRAMCEYIEFVADRLLTELQQPKHFN-TPNPFNFMN-NISLEGKTNFFERRVGEYKRFGA 328 Query: 122 LKW 124 Sbjct: 329 GAD 331 >gi|188527870|ref|YP_001910557.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori Shi470] gi|188144110|gb|ACD48527.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori Shi470] gi|308063873|gb|ADO05760.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori Sat464] Length = 341 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E ++ +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 Query: 121 ELKWD 125 D Sbjct: 336 VSFDD 340 >gi|296282225|ref|ZP_06860223.1| ribonucleotide-diphosphate reductase subunit beta [Citromicrobium bathyomarinum JL354] Length = 354 Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 2/122 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDESLH I + ++ E +TK ++ + ++ LE + G G Sbjct: 189 VRDESLHCEGIIRLFHEFVRER-DCYTKAVKEDIIDICQKSVRLEDNFIDLAFEMGPVSG 247 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + A ++Y+++IA+ R Q+GL+P++ E+P PW++ +++ + NFFE R TEY +G Sbjct: 248 MTAKEIKKYIRYIADWRLGQLGLQPIYMIDEHPLPWLTPLLNGVEHANFFEQRATEYSKG 307 Query: 120 AE 121 A Sbjct: 308 AT 309 >gi|317009697|gb|ADU80277.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori India7] Length = 341 Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E + +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEALWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 Query: 121 ELKWD 125 D Sbjct: 336 VSFDD 340 >gi|56551339|ref|YP_162178.1| ribonucleotide-diphosphate reductase subunit beta [Zymomonas mobilis subsp. mobilis ZM4] gi|241760992|ref|ZP_04759081.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753042|ref|YP_003225935.1| ribonucleotide-diphosphate reductase subunit beta [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|56542913|gb|AAV89067.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp. mobilis ZM4] gi|241374611|gb|EER64072.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552405|gb|ACV75351.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 345 Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 2/122 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDESLH I + + E L TK+ + + +E A+ G G Sbjct: 189 VRDESLHCEGIIRLFHTFCQERQCL-TKQVKDDILNICQRTVRIEDAFIDLVFEMGPVEG 247 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + ++Y+++IA+ R Q+GL P++ E+P PW++ +++ + NFFETR TEY + Sbjct: 248 MTPKEIKKYIRYIADWRLGQLGLSPIYMIEEHPLPWLTPLLNGVEHANFFETRSTEYSKA 307 Query: 120 AE 121 A Sbjct: 308 AT 309 >gi|208434985|ref|YP_002266651.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter pylori G27] gi|208432914|gb|ACI27785.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter pylori G27] Length = 341 Score = 139 bits (352), Expect = 9e-32, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E + +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEALWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 Query: 121 ELKWD 125 D Sbjct: 336 VSFDD 340 >gi|228861726|ref|YP_002854746.1| Rr2 [Euproctis pseudoconspersa nucleopolyhedrovirus] gi|226425174|gb|ACO53586.1| Rr2 [Euproctis pseudoconspersa nucleopolyhedrovirus] Length = 339 Score = 139 bits (352), Expect = 9e-32, Method: Composition-based stats. Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 6/123 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH NF N+ E K ++ M EA +E + +P +G+N Sbjct: 215 RDEGLHTNFACLYYNEYIPE----HDKLSSERILDMFIEAVEIEKEFFKTALPCSLLGMN 270 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S +Y++F+A+R + F NPF +M+ I ++ + NFFE RV EY++ Sbjct: 271 TESMCRYIEFVADRLLVDLNQPKHF-MASNPFNFMT-NISMEGKTNFFERRVGEYRRFGA 328 Query: 122 LKW 124 + Sbjct: 329 GQD 331 >gi|291303011|ref|YP_003514289.1| Ribonucleoside-diphosphate reductase [Stackebrandtia nassauensis DSM 44728] gi|290572231|gb|ADD45196.1| Ribonucleoside-diphosphate reductase [Stackebrandtia nassauensis DSM 44728] Length = 338 Score = 139 bits (352), Expect = 9e-32, Method: Composition-based stats. Identities = 37/124 (29%), Positives = 69/124 (55%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES H+NF V++ ++ E P L+ E + M+ EA E+ +A + +G G+ Sbjct: 212 RDESCHMNFAFSVVDVVRNEEPELFDDELTEAVTRMIEEAVAAELQFARDLCGEGMPGMT 271 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y++++A++R ++G+ + ++NPF +M+ + D+++ NFFE R T YQ Sbjct: 272 VNDMKSYLEYVADQRLTRLGMPVRY-GSKNPFGFMA-LQDVQELTNFFERRPTAYQVAVG 329 Query: 122 LKWD 125 D Sbjct: 330 GTVD 333 >gi|325268390|ref|ZP_08135022.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella multiformis DSM 16608] gi|324989244|gb|EGC21195.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella multiformis DSM 16608] Length = 348 Score = 139 bits (352), Expect = 9e-32, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I ++K E P ++T + + M+ E EIA+ + GLN Sbjct: 220 RDENTHLWLFRSIILELKKEEPDMFTPDRIKVYEDMMREGVRQEIAWGQYVIGNDVQGLN 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y++++ N R +G L+ + P W+ + + + +FFE + T Y Sbjct: 280 EQMVSDYIRYLGNLRWSGLGFGFLYDDNRKEPENMKWVGQYSNANMVKTDFFEAKSTAYA 339 Query: 118 QGAELKWD 125 + L D Sbjct: 340 KSTALADD 347 >gi|217032591|ref|ZP_03438080.1| hypothetical protein HPB128_159g17 [Helicobacter pylori B128] gi|298735909|ref|YP_003728434.1| ribonucleoside-diphosphate reductase subunit beta [Helicobacter pylori B8] gi|216945727|gb|EEC24352.1| hypothetical protein HPB128_159g17 [Helicobacter pylori B128] gi|298355098|emb|CBI65970.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter pylori B8] Length = 341 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E + +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEALWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 Query: 121 ELKWD 125 D Sbjct: 336 VSFDD 340 >gi|149375674|ref|ZP_01893443.1| Ribonucleotide reductase, beta subunit [Marinobacter algicola DG893] gi|149360076|gb|EDM48531.1| Ribonucleotide reductase, beta subunit [Marinobacter algicola DG893] Length = 352 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 3/124 (2%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H +FG+ V+NQI E + R M E+ E AYA+ + +G Sbjct: 232 LRDEAMHFSFGLKVVNQILEEENITLDP---KAVRDMWDESEAAETAYANYILRDPILGY 288 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A + +F+ANRR +GLE F +N PW+ E L+KEKNFFETRV EYQ GA Sbjct: 289 SAQYHSEQFRFVANRRARTVGLEEPFPGAKNVSPWLDEQATLRKEKNFFETRVIEYQTGA 348 Query: 121 ELKW 124 +L+W Sbjct: 349 QLEW 352 >gi|297380266|gb|ADI35153.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori v225d] gi|308062365|gb|ADO04253.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori Cuz20] gi|317180823|dbj|BAJ58609.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori F32] gi|332673890|gb|AEE70707.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter pylori 83] Length = 341 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E ++ +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 Query: 121 ELKWD 125 D Sbjct: 336 VSFDD 340 >gi|317178607|dbj|BAJ56395.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori F30] Length = 341 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E ++ +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 Query: 121 ELKWD 125 D Sbjct: 336 VSFDD 340 >gi|261838422|gb|ACX98188.1| ribonucleoside-diphosphate reductase 1 beta subunit [Helicobacter pylori 51] Length = 341 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E ++ +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 Query: 121 ELKWD 125 D Sbjct: 336 VSFDD 340 >gi|115378653|ref|ZP_01465803.1| ribonucleoside-diphosphate reductase, beta subunit [Stigmatella aurantiaca DW4/3-1] gi|115364319|gb|EAU63404.1| ribonucleoside-diphosphate reductase, beta subunit [Stigmatella aurantiaca DW4/3-1] Length = 288 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 2/118 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES H+ F + I + E P L+ Q M+ EA E +A + + G GL+ Sbjct: 158 RDESTHMAFAFEAIRVARQEEPDLFDARMQADVVAMMREAVECETLFAQDLLSGGVAGLS 217 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 QY++++A++R +GL P+F+ +N P+M + D+++ NFFE RV+ YQ Sbjct: 218 VQEMRQYLEYVADQRLTMLGLAPVFR-VKNSLPFMD-LQDVQELTNFFERRVSAYQVA 273 >gi|308183194|ref|YP_003927321.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori PeCan4] gi|308065379|gb|ADO07271.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori PeCan4] Length = 341 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E ++ +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 Query: 121 ELKWD 125 D Sbjct: 336 VSFDD 340 >gi|269865926|ref|XP_002652096.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220063168|gb|EED41960.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] Length = 330 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + I + ++ EA +E + E++P +G+N Sbjct: 219 RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 269 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 QY++F+A+R +G + ++ + NPF +M E I L+ + NFFE R YQ+G Sbjct: 270 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 325 >gi|269864946|ref|XP_002651751.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|269865852|ref|XP_002652068.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|269866233|ref|XP_002652201.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220062966|gb|EED41855.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220063214|gb|EED41988.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220063944|gb|EED42305.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] Length = 226 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + I + ++ EA +E + E++P +G+N Sbjct: 104 RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 154 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 QY++F+A+R +G + ++ + NPF +M E I L+ + NFFE R YQ+G Sbjct: 155 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 210 >gi|210135249|ref|YP_002301688.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori P12] gi|210133217|gb|ACJ08208.1| ribonucleoside-diphosphate reductase 1 beta subunit [Helicobacter pylori P12] Length = 341 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E ++ +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 Query: 121 ELKWD 125 D Sbjct: 336 VSFDD 340 >gi|9634266|ref|NP_037805.1| ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera exigua MNPV] gi|6960505|gb|AAF33575.1|AF169823_45 ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera exigua MNPV] Length = 313 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 8/123 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH NF N + T M EA +E+ + E +P+ VG+N Sbjct: 191 RDEGLHTNFACLYYNTRVDQKLDAPT------VNDMFSEAVAIEMEFFAEALPESLVGMN 244 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A +Y++F+A+R Q+ ++ YTENPF +M+ I L+ + NFFE RV EY++ Sbjct: 245 ANMMRKYIEFVADRLLVQLKYPKMY-YTENPFEFMN-NISLEGKTNFFEKRVGEYKRFGA 302 Query: 122 LKW 124 + Sbjct: 303 GED 305 >gi|108763495|ref|YP_633213.1| ribonucleoside-diphosphate reductase subunit beta [Myxococcus xanthus DK 1622] gi|108467375|gb|ABF92560.1| ribonucleoside-diphosphate reductase, beta subunit [Myxococcus xanthus DK 1622] Length = 349 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 38/118 (32%), Positives = 66/118 (55%), Gaps = 2/118 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES H+ F + I + E P L+ + ++ ML EA E +A + + G +GL+ Sbjct: 219 RDESAHMAFAFESIQVARKEEPDLFDAQMERDVVAMLREAVECETQFAQDLLSGGVMGLS 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 Y++++A++R +G+ P+F T+NP +M + D+++ NFFE RV+ YQ Sbjct: 279 VQDMRGYLEYVADQRLQMLGMTPVF-GTKNPLHFMD-LQDVQELTNFFERRVSSYQVA 334 >gi|225568010|ref|ZP_03777035.1| hypothetical protein CLOHYLEM_04083 [Clostridium hylemonae DSM 15053] gi|225163184|gb|EEG75803.1| hypothetical protein CLOHYLEM_04083 [Clostridium hylemonae DSM 15053] Length = 355 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++ ++K E P L+ E + R M+ E EI + H + GL Sbjct: 227 RDENTHLWLFRSMLQELKKEEPQLFAAEDIKMYRQMIREGCEQEIRWGHYVIGDKIQGLT 286 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y++++ N RC +G E +++ W+ + + + +FFE + T Y Sbjct: 287 KDMITSYIRYLGNLRCTGLGFERIYEGYDTIPESMRWVEQYSNANLIKTDFFEAKSTAYA 346 Query: 118 QGAELKWD 125 + + L D Sbjct: 347 KSSALVDD 354 >gi|313844096|ref|YP_004061759.1| hypothetical protein OlV1_126 [Ostreococcus lucimarinus virus OlV1] gi|312599481|gb|ADQ91503.1| hypothetical protein OlV1_126 [Ostreococcus lucimarinus virus OlV1] Length = 408 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 34/117 (29%), Positives = 66/117 (56%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH F +++ ++I K + +++ EA +E + + +P +G+N Sbjct: 287 RDEGLHQEFAVELFKLLRI-------KPTTETIHSIVKEAVEIEKGFILDALPCALIGMN 339 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + +Y++++++R QIG+ P++ ++NPF +M E I L + NFFE RV +Y + Sbjct: 340 SEKMSEYIEYVSDRLLKQIGVPPIWN-SKNPFDFM-ENISLDGKTNFFEKRVGDYGK 394 >gi|325859841|ref|ZP_08172971.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella denticola CRIS 18C-A] gi|325482767|gb|EGC85770.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella denticola CRIS 18C-A] Length = 348 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I ++K E P ++T + + M+ E EIA+ + GLN Sbjct: 220 RDENTHLWLFRSIILELKKEEPDMFTPDRIKVYEDMMREGVRQEIAWGQYVIGNDVQGLN 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y++++ N R +G L+ + P W+ + + + +FFE + T Y Sbjct: 280 EQMVSDYIRYLGNLRWSGLGFGFLYDDNRKEPENMKWVGQYSNANMVKTDFFEAKSTAYA 339 Query: 118 QGAELKWD 125 + L D Sbjct: 340 KSTALVDD 347 >gi|217034470|ref|ZP_03439882.1| hypothetical protein HP9810_890g15 [Helicobacter pylori 98-10] gi|216943072|gb|EEC22549.1| hypothetical protein HP9810_890g15 [Helicobacter pylori 98-10] gi|317177841|dbj|BAJ55630.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori F16] Length = 341 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E + +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIESLWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 Query: 121 ELKWD 125 D Sbjct: 336 VSFDD 340 >gi|261839822|gb|ACX99587.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori 52] Length = 341 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E + +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 Query: 121 ELKWD 125 D Sbjct: 336 VSFDD 340 >gi|108563454|ref|YP_627770.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori HPAG1] gi|107837227|gb|ABF85096.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter pylori HPAG1] Length = 341 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E + +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 Query: 121 ELKWD 125 D Sbjct: 336 VSFDD 340 >gi|330814259|ref|YP_004358498.1| ribonucleotide reductase of class Ia (aerobic), beta subunit [Candidatus Pelagibacter sp. IMCC9063] gi|327487354|gb|AEA81759.1| ribonucleotide reductase of class Ia (aerobic), beta subunit [Candidatus Pelagibacter sp. IMCC9063] Length = 345 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 1/122 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH N I + N ENP L +++ E A+ G G Sbjct: 212 VRDETLHCNSMIKIFNTFCDENPGLLDDSLKKEIYEACSTIIEHEDAFIDLAFEMGDIEG 271 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A ++Y+++IANRR Q+ L L++ ENP W+ ++++ + NFFE R TEY + Sbjct: 272 LKAEEVKKYIRWIANRRLAQLRLNDLYEVKENPLTWLDDMLNGVEHMNFFEGRATEYSKA 331 Query: 120 AE 121 + Sbjct: 332 ST 333 >gi|322378346|ref|ZP_08052803.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter suis HS1] gi|322379688|ref|ZP_08054002.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter suis HS5] gi|321147887|gb|EFX42473.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter suis HS5] gi|321149232|gb|EFX43675.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter suis HS1] Length = 342 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 2/120 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL+ ++IN ++ E L++ E + M +A LE A+ + L+ Sbjct: 218 RDELTHLHLFQNMINTLRKERSDLFSPELIAEVNEMFKQAVDLESAWGAYITQGEMLDLS 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 Y +++A+ R +GL L+ ++NP W+ + + NFFE +V+ Y +G+ Sbjct: 278 PQILRTYTEYLADTRLAVVGLPKLYN-SQNPIKWVDQFANFNSHRSNFFEAKVSNYSKGS 336 >gi|157736292|ref|YP_001488975.1| ribonucleotide-diphosphate reductase subunit beta [Arcobacter butzleri RM4018] gi|157698146|gb|ABV66306.1| ribonucleoside-diphosphate reductase, beta chain [Arcobacter butzleri RM4018] Length = 339 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+T E ++ R M +A LE ++ +G Sbjct: 215 RDEVTHLLLFQNMINSVRKERPDLFTSELEETVRAMFRKAVDLEASWGAYITQGQILGFT 274 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 QY++++A+RR +G + + ++P PW+ + NFFE V Y +G+ Sbjct: 275 DGIIRQYIEYLADRRLEAVGYKAEY-GVKHPIPWVDGYASFNDQRTNFFEGNVVNYSKGS 333 Query: 121 ELKWD 125 + +D Sbjct: 334 -IDFD 337 >gi|207092116|ref|ZP_03239903.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori HPKX_438_AG0C1] Length = 341 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E + +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 Query: 121 ELKWD 125 D Sbjct: 336 VSFDD 340 >gi|15644992|ref|NP_207162.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori 26695] gi|2500210|sp|P55983|RIR2_HELPY RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit gi|2313466|gb|AAD07432.1| ribonucleoside diphosphate reductase, beta subunit (nrdB) [Helicobacter pylori 26695] Length = 341 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E + +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 Query: 121 ELKWD 125 D Sbjct: 336 VSFDD 340 >gi|103487260|ref|YP_616821.1| ribonucleotide-diphosphate reductase subunit beta [Sphingopyxis alaskensis RB2256] gi|98977337|gb|ABF53488.1| Ribonucleoside-diphosphate reductase [Sphingopyxis alaskensis RB2256] Length = 354 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 2/122 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDESLH I + + E L TK ++ + LE A+ +G G Sbjct: 189 IRDESLHCEGIIKLFHAFTKERGCL-TKAVKEDIIDTCQKTVRLEDAFIDLAFEQGPVPG 247 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + ++Y+++IA+ R Q+G +P++ E+P PW++ +++ + NFFETR TEY +G Sbjct: 248 MTPKEIKRYIRYIADWRLGQLGFQPIYMIDEHPLPWLAPLLNGVEHANFFETRATEYSKG 307 Query: 120 AE 121 A Sbjct: 308 AT 309 >gi|317182342|dbj|BAJ60126.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori F57] Length = 341 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T + + M +A +E + +GL Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120 + EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+ Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 Query: 121 ELKWD 125 D Sbjct: 336 VSFDD 340 >gi|322510876|gb|ADX06189.1| putative ribonucleotide reductase small subunit [Organic Lake phycodnavirus 2] Length = 324 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 39/116 (33%), Positives = 71/116 (61%), Gaps = 9/116 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+LH F + + N+++ K ++K R ++ EA +E + + +P +G+N Sbjct: 201 RDEALHTEFAVYLYNRLEK-------KLNKKKVREIIEEAVTIEKEFIVDALPCRMIGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + QY++F+A+R Q+G + ++ T NPF +M E+I L+++ NFFE+RV+EY Sbjct: 254 SELMTQYIEFVADRLMMQLGCDVIY-ATNNPFDFM-ELISLEQKTNFFESRVSEYS 307 >gi|225712968|gb|ACO12330.1| Ribonucleoside-diphosphate reductase small chain [Lepeophtheirus salmonis] Length = 335 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H +F + + HL K + ++ E +E + +++P G +G+N Sbjct: 209 RDEGSHTDFACLLYS-------HLENKLDPKYVLQIIKEGVEIEKEFVADSLPVGLIGMN 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 A + Y++F+A+ + +E + +T+NPF +M I + + NFF+ RV+EYQ+ Sbjct: 262 AKMMKNYIEFVADNLLENLNIEK-YYHTKNPFNFMD-NISMTGKTNFFDKRVSEYQR 316 >gi|269864629|ref|XP_002651641.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220064151|gb|EED42415.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] Length = 277 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + I + ++ EA +E + E++P +G+N Sbjct: 155 RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 205 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 QY++F+A+R +G + ++ + NPF +M E I L+ + NFFE R YQ+G Sbjct: 206 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 261 >gi|310823070|ref|YP_003955428.1| ribonucleoside-diphosphate reductase subunit beta [Stigmatella aurantiaca DW4/3-1] gi|309396142|gb|ADO73601.1| Ribonucleoside-diphosphate reductase, beta subunit [Stigmatella aurantiaca DW4/3-1] Length = 336 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 2/118 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES H+ F + I + E P L+ Q M+ EA E +A + + G GL+ Sbjct: 206 RDESTHMAFAFEAIRVARQEEPDLFDARMQADVVAMMREAVECETLFAQDLLSGGVAGLS 265 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 QY++++A++R +GL P+F+ +N P+M + D+++ NFFE RV+ YQ Sbjct: 266 VQEMRQYLEYVADQRLTMLGLAPVFR-VKNSLPFMD-LQDVQELTNFFERRVSAYQVA 321 >gi|42523460|ref|NP_968840.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio bacteriovorus HD100] gi|39575666|emb|CAE79833.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio bacteriovorus HD100] Length = 336 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 42/126 (33%), Positives = 74/126 (58%), Gaps = 4/126 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES+H+ F I+V+ + E P L+ ++ + ML +A E+ +AH+ + G GL+ Sbjct: 210 RDESMHMAFAIEVVKTARKEEPELFNQQMEDMVVQMLEDAIECEMEFAHDVLNLGVAGLS 269 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119 A QY+++ A++R + + P + +NPF +M E+ D+++ NFFE RV+ YQ G Sbjct: 270 AKDMRQYLEYCADQRLESLNIAPRYN-VKNPFIFM-ELQDMQELANFFERRVSAYQTGVS 327 Query: 120 AELKWD 125 + +D Sbjct: 328 GAVAFD 333 >gi|167648664|ref|YP_001686327.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter sp. K31] gi|167351094|gb|ABZ73829.1| Ribonucleoside-diphosphate reductase [Caulobacter sp. K31] Length = 346 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 2/122 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDESLH I + + E T E ++E A+ G G Sbjct: 197 IRDESLHCEGIIKLYHAFNAETK-CVTPEVAADIVECCKSVVIMEDAFIDLAFEAGEIQG 255 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + +QY++FIA+ R Q+ L ++ ENP PW+ ++ + NFFE R TEY + Sbjct: 256 MTPHDIKQYIRFIADWRLRQLHLPEVYGIKENPLPWLQSLLSGVEHANFFEARATEYSKA 315 Query: 120 AE 121 A Sbjct: 316 AT 317 >gi|299472857|emb|CBN80426.1| EsV-1-128 [Ectocarpus siliculosus] Length = 419 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH + + ++ + P Q++ + A +E + +P +G++ Sbjct: 294 RDEGLHATASVLIYKHLRNKLP-------QERVHEIFEHAVSVECEFISSALPVALIGIS 346 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S +Y++F+A+ +Q+G + ++ NPF WM +I L+ + NFFE RV EY + Sbjct: 347 EKSMTEYIKFVADYWLNQLGYDKVYNCA-NPFEWMD-MISLQGKTNFFENRVAEYSKPGV 404 Query: 122 L 122 L Sbjct: 405 L 405 >gi|73979723|ref|XP_856346.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase M2 chain (Ribonucleotide reductase small chain) isoform 3 [Canis familiaris] Length = 381 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 22/122 (18%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N Sbjct: 269 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIIINAVRIEQEFLTEALPVKLIGMN 321 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+ ENPF +M E I L+ + NFFE RV EYQ+ Sbjct: 322 CTLMKQYIEFVFR--------------VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 366 Query: 122 LK 123 + Sbjct: 367 MS 368 >gi|269863618|ref|XP_002651286.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220064807|gb|EED42770.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] Length = 332 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + I + ++ EA +E + E++P +G+N Sbjct: 219 RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 269 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 QY++F+A+R +G + ++ + NPF +M E I L+ + NFFE R YQ+G Sbjct: 270 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 325 >gi|153875510|ref|ZP_02003277.1| ribonucleotide-diphosphate reductase beta subunit [Beggiatoa sp. PS] gi|152068026|gb|EDN66723.1| ribonucleotide-diphosphate reductase beta subunit [Beggiatoa sp. PS] Length = 374 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 57/125 (45%), Positives = 81/125 (64%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVGL 60 RDE+LH + G+ +I QI EN LW Q++SR ++ EA LE YAH +MP+ G VGL Sbjct: 251 RDENLHSSNGLWLIKQIIQENHELWDSTMQERSRAIVSEAVKLETDYAHASMPEGGIVGL 310 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 + ++ F+A+ C +G++PLF+ E+P PW+SE +L E NFFE RV EYQ G+ Sbjct: 311 PVKTYIKFSHFVADNICKNLGIKPLFRVREHPMPWISEY-ELNHEVNFFEGRVREYQTGS 369 Query: 121 ELKWD 125 +L WD Sbjct: 370 QLTWD 374 >gi|289425969|ref|ZP_06427716.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes SK187] gi|289153512|gb|EFD02226.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes SK187] gi|313763766|gb|EFS35130.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL013PA1] gi|313802998|gb|EFS44206.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL110PA2] gi|313816916|gb|EFS54630.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL059PA1] gi|313829718|gb|EFS67432.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL063PA2] gi|313839374|gb|EFS77088.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL086PA1] gi|314916474|gb|EFS80305.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL005PA4] gi|314932316|gb|EFS96147.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL067PA1] gi|314956590|gb|EFT00842.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL027PA1] gi|314959472|gb|EFT03574.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL002PA1] gi|314964864|gb|EFT08964.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL082PA1] gi|314968630|gb|EFT12728.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL037PA1] gi|315079174|gb|EFT51177.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL053PA2] gi|315100241|gb|EFT72217.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL059PA2] gi|315102565|gb|EFT74541.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL046PA1] gi|315109517|gb|EFT81493.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL030PA2] gi|327455890|gb|EGF02545.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL087PA3] gi|327458042|gb|EGF04697.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL083PA2] gi|328757204|gb|EGF70820.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL087PA1] gi|328757585|gb|EGF71201.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL025PA2] Length = 328 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 1/120 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLHL FG+++I + ENP + T EF + M+ + +E Y + +P+G +G+ Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGILGM 263 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA Y++++A+RR ++G EP ++ NP WM+ D + NFFE T Y+ A Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEYRVA-NPAKWMATANDTLQVVNFFEATNTSYEVNA 322 >gi|314918862|gb|EFS82693.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL050PA1] gi|314921071|gb|EFS84902.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL050PA3] Length = 328 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 1/120 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLHL FG+++I + ENP + T EF + M+ + +E Y + +P+G +G+ Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGILGM 263 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA Y++++A+RR ++G EP ++ NP WM+ D + NFFE T Y+ A Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEYRVA-NPAKWMATANDTLQVVNFFEATNTSYEVNA 322 >gi|294013210|ref|YP_003546670.1| ribonucleoside-diphosphate reductase beta chain [Sphingobium japonicum UT26S] gi|292676540|dbj|BAI98058.1| ribonucleoside-diphosphate reductase beta chain [Sphingobium japonicum UT26S] Length = 351 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 2/122 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH + + + E L T + M + +E A+ G G Sbjct: 189 VRDETLHCEGIVRLFHAFVKERDCL-TASVKDDIMDMCQKTVRIEDAFVDLVFEMGPVPG 247 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + ++Y+++IA+ R Q+GL+P++ E+P PW++ +++ + NFFETR TEY + Sbjct: 248 MTPKDIKKYVRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANFFETRATEYSKA 307 Query: 120 AE 121 A Sbjct: 308 AT 309 >gi|167756571|ref|ZP_02428698.1| hypothetical protein CLORAM_02108 [Clostridium ramosum DSM 1402] gi|237733862|ref|ZP_04564343.1| ribonucleotide-diphosphate reductase subunit beta [Mollicutes bacterium D7] gi|167702746|gb|EDS17325.1| hypothetical protein CLORAM_02108 [Clostridium ramosum DSM 1402] gi|229382943|gb|EEO33034.1| ribonucleotide-diphosphate reductase subunit beta [Coprobacillus sp. D7] Length = 346 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I +++ E P L+T E + R ML EIA+ + GL Sbjct: 218 RDENTHLWLFRNMIIELQKEEPTLFTPEKIEVYRNMLKRGVEEEIAWGQYVLGNRIEGLT 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y+ ++ N R + EPL++ E W+S + + +FFE + T Y Sbjct: 278 MDMVSDYIHYLGNLRAFSLNFEPLYEGFETEPEAMKWVSIYSNANNIKTDFFEAKSTAYA 337 Query: 118 QGAELKWD 125 + + ++ D Sbjct: 338 KSSAIEDD 345 >gi|167627842|ref|YP_001678342.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597843|gb|ABZ87841.1| Ribonucleoside-diphosphate reductase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 410 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDES+H+ + ENP++ +F+++ M +A LE + G G Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNQFKKEIYLMASKAVELEDKFIDLAYEIGTIEG 338 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A ++Y++ I +RR +Q+GL ++ +NP W+ +++ NFFE RVTEY+ Sbjct: 339 LKADEVKEYIRHITDRRLNQLGLNEIYNIDKNPLTWLEWILNGADHTNFFENRVTEYEVA 398 Query: 120 A-ELKWD 125 WD Sbjct: 399 GLTGNWD 405 >gi|155370749|ref|YP_001426283.1| hypothetical protein FR483_N651L [Paramecium bursaria Chlorella virus FR483] gi|155124069|gb|ABT15936.1| hypothetical protein FR483_N651L [Paramecium bursaria Chlorella virus FR483] Length = 348 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH FG + ++++ K + + ++ EA E + E +P +G+N Sbjct: 224 RDEGLHQQFGELLYSKLE-------NKLSLAQVKAIVEEAVANEKEFICEAIPCRMIGMN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G + T NPF +M E+I L+ + NFFE RV+EYQ+ Sbjct: 277 SELMGQYLEFVADRIFVALGHPKQYNAT-NPFDFM-ELISLEGKSNFFERRVSEYQRPGV 334 Query: 122 LK 123 + Sbjct: 335 MN 336 >gi|13242599|ref|NP_077613.1| EsV-1-128 [Ectocarpus siliculosus virus 1] gi|13177402|gb|AAK14546.1|AF204951_128 EsV-1-128 [Ectocarpus siliculosus virus 1] Length = 419 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 9/121 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH + + +K P +++ + A +E + +P +G++ Sbjct: 294 RDEGLHATASVLIYKHLKNRLP-------RERVHEIFKHAVSVECEFISSALPVALIGIS 346 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S +Y++F+A+ +Q+G + ++ NPF WM +I L+ + NFFE RV EY + Sbjct: 347 EKSMTEYIKFVADYWLNQLGYDKVYNCA-NPFEWMD-MISLQGKTNFFENRVAEYSKPGV 404 Query: 122 L 122 L Sbjct: 405 L 405 >gi|85710107|ref|ZP_01041172.1| ribonucleotide reductase beta subunit [Erythrobacter sp. NAP1] gi|85688817|gb|EAQ28821.1| ribonucleotide reductase beta subunit [Erythrobacter sp. NAP1] Length = 346 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 2/122 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH I + + E L TK ++ + + LE A+ G G Sbjct: 189 VRDETLHCEGIIKMFHTFCEERDCL-TKAVKEDIIDICQKTVRLEDAFIDLAFEMGPVEG 247 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + A ++Y+++IA+ R Q+ L+P++ E+P PW+S +++ + NFFE R TEY +G Sbjct: 248 MTAKDIKKYIRYIADWRLGQLNLQPIYMIDEHPLPWLSPLLNGVEHANFFEARATEYSKG 307 Query: 120 AE 121 A Sbjct: 308 AT 309 >gi|50843560|ref|YP_056787.1| ribonucleotide-diphosphate reductase subunit beta [Propionibacterium acnes KPA171202] gi|282854887|ref|ZP_06264221.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes J139] gi|289427904|ref|ZP_06429608.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes J165] gi|295131638|ref|YP_003582301.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes SK137] gi|50841162|gb|AAT83829.1| ribonucleoside-diphosphate reductase beta chain [Propionibacterium acnes KPA171202] gi|282582033|gb|EFB87416.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes J139] gi|289158787|gb|EFD06987.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes J165] gi|291376691|gb|ADE00546.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes SK137] gi|313771782|gb|EFS37748.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL074PA1] gi|313808408|gb|EFS46875.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL087PA2] gi|313810605|gb|EFS48319.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL083PA1] gi|313813765|gb|EFS51479.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL025PA1] gi|313818171|gb|EFS55885.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL046PA2] gi|313821029|gb|EFS58743.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL036PA1] gi|313823899|gb|EFS61613.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL036PA2] gi|313827161|gb|EFS64875.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL063PA1] gi|313831646|gb|EFS69360.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL007PA1] gi|313834800|gb|EFS72514.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL056PA1] gi|314924366|gb|EFS88197.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL001PA1] gi|314927054|gb|EFS90885.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL036PA3] gi|314961874|gb|EFT05975.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL002PA2] gi|314965892|gb|EFT09991.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL082PA2] gi|314974996|gb|EFT19091.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL053PA1] gi|314977908|gb|EFT22002.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL045PA1] gi|314979603|gb|EFT23697.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL072PA2] gi|314981613|gb|EFT25706.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL110PA3] gi|314984684|gb|EFT28776.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL005PA1] gi|314988338|gb|EFT32429.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL005PA2] gi|314990428|gb|EFT34519.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL005PA3] gi|315082361|gb|EFT54337.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL078PA1] gi|315083809|gb|EFT55785.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL027PA2] gi|315087306|gb|EFT59282.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL002PA3] gi|315089724|gb|EFT61700.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL072PA1] gi|315092253|gb|EFT64229.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL110PA4] gi|315094826|gb|EFT66802.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL060PA1] gi|315095599|gb|EFT67575.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL038PA1] gi|315104692|gb|EFT76668.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL050PA2] gi|315107754|gb|EFT79730.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL030PA1] gi|327326613|gb|EGE68401.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL096PA3] gi|327332877|gb|EGE74609.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL096PA2] gi|327335278|gb|EGE76988.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL097PA1] gi|327447704|gb|EGE94358.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL043PA2] gi|327448579|gb|EGE95233.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL043PA1] gi|327449568|gb|EGE96222.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL013PA2] gi|328757395|gb|EGF71011.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL020PA1] gi|328762002|gb|EGF75508.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL099PA1] gi|332676502|gb|AEE73318.1| ribonucleoside-diphosphate reductase subunit beta [Propionibacterium acnes 266] Length = 328 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 1/120 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLHL FG+++I + ENP + T EF + M+ + +E Y + +P+G +G+ Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGILGM 263 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA Y++++A+RR ++G EP ++ NP WM+ D + NFFE T Y+ A Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEYRVV-NPAKWMATANDTLQVVNFFEATNTSYEVNA 322 >gi|241668401|ref|ZP_04755979.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876934|ref|ZP_05249644.1| glutaredoxin 3/ribonucleotide reductase beta subunit [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842955|gb|EET21369.1| glutaredoxin 3/ribonucleotide reductase beta subunit [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 410 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 2/127 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDES+H+ + ENP++ +F+++ M +A LE + G G Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNQFKKEIYLMASKAVELEDKFIDLAYEIGTIEG 338 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A ++Y++ I +RR +Q+GL ++ +NP W+ +++ NFFE RVTEY+ Sbjct: 339 LKADEVKEYIRHITDRRLNQLGLNEIYNIDKNPLTWLEWILNGADHTNFFENRVTEYEVA 398 Query: 120 A-ELKWD 125 WD Sbjct: 399 GLTGNWD 405 >gi|118443949|ref|YP_878438.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium novyi NT] gi|118134405|gb|ABK61449.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium novyi NT] Length = 342 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I ++K ENP ++T+ ++ R M+ EI + +G+N Sbjct: 214 RDEITHLILFQNIIKELKNENPDIFTESIMEEFRMMMKMGVEHEIKWGQYVTNNEILGIN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119 E+Y+++++N R + IGLE L+ + TE+P W+ L + +FFE +VT Y + Sbjct: 274 DNLIEKYIKYLSNLRLNAIGLEVLYPEITEHPMEWIENFSKLNNTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|327328671|gb|EGE70431.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL103PA1] Length = 328 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 1/120 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLHL FG+++I + ENP + T EF + M+ + +E Y + +P+G +G+ Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGILGM 263 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA Y++++A+RR ++G EP ++ NP WM+ D + NFFE T Y+ A Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEYRIV-NPAKWMATANDTLQVVNFFEATNTSYEVNA 322 >gi|313768143|ref|YP_004061574.1| hypothetical protein BpV1_144c [Bathycoccus sp. RCC1105 virus BpV1] gi|312599750|gb|ADQ91771.1| hypothetical protein BpV1_144c [Bathycoccus sp. RCC1105 virus BpV1] Length = 387 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 34/117 (29%), Positives = 63/117 (53%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H F +++ N +K K Q ++ +A +E + + +P +G+N Sbjct: 266 RDEGMHQEFAVELFNMLK-------NKPSQNTIEEIIRDAVSIEKEFITDALPCSLIGMN 318 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + +Y++++A+R Q+G ++ T+NPF +M E I L + NFFE RV +Y + Sbjct: 319 SGKMSEYIEYVADRLSKQVGHNKIWN-TKNPFDFM-ENISLDGKTNFFEKRVGDYGK 373 >gi|256825983|ref|YP_003149943.1| ribonucleotide reductase subunit beta [Kytococcus sedentarius DSM 20547] gi|256689376|gb|ACV07178.1| ribonucleotide reductase, beta subunit [Kytococcus sedentarius DSM 20547] Length = 365 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 43/126 (34%), Positives = 72/126 (57%), Gaps = 4/126 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES+H+ F +V+ ++ E P L+ E + R ML EA E +A + + G GL+ Sbjct: 239 RDESMHMAFAFEVVETVRSEEPDLFDAEMAGQVRQMLMEAVDAEAQFAEDLLGMGVAGLS 298 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119 Y++ +A+RR Q+G+ ++ T+NP +M E+ D+++ NFFE RV+ YQ G Sbjct: 299 VADMRAYLENVADRRAVQLGMPEIY-GTKNPLAFM-ELQDVQELSNFFERRVSAYQVGVE 356 Query: 120 AELKWD 125 + +D Sbjct: 357 GSVSFD 362 >gi|302381236|ref|YP_003817059.1| ribonucleoside-diphosphate reductase [Brevundimonas subvibrioides ATCC 15264] gi|302191864|gb|ADK99435.1| Ribonucleoside-diphosphate reductase [Brevundimonas subvibrioides ATCC 15264] Length = 348 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 2/122 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDESLH + I + + E + TK LE + G + G Sbjct: 200 VRDESLHCDGIIKLYHAFNKETG-VVTKAVADDIVQCCETVVGLEDKFIDLAFEAGEING 258 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + +QY++FIA+ R Q+ L L+ ENP PW+ ++ + NFFE R TEY + Sbjct: 259 MTPEDIKQYIRFIADWRLRQLKLPELYGVKENPLPWLQSLLSGVEHANFFEARATEYSKA 318 Query: 120 AE 121 A Sbjct: 319 AT 320 >gi|254293199|ref|YP_003059222.1| ribonucleotide-diphosphate reductase subunit beta [Hirschia baltica ATCC 49814] gi|254041730|gb|ACT58525.1| Ribonucleoside-diphosphate reductase [Hirschia baltica ATCC 49814] Length = 345 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 3/126 (2%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDESLH + + + E L TK + LE + G G Sbjct: 198 VRDESLHCEGMMKMFHTYAEETGAL-TKTVKDDITDCCQTVVKLEDKFIDLAFEAGEVEG 256 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + + Y+++IA+ R Q+ L+P++ E+P PW++E+++ + NFFE R TEY +G Sbjct: 257 MTPEDIKNYIRYIADWRLKQLKLDPVYGVDEHPIPWLTEILNGVEHANFFEARATEYSKG 316 Query: 120 A-ELKW 124 A W Sbjct: 317 ATAGDW 322 >gi|50955339|ref|YP_062627.1| ribonucleotide-diphosphate reductase subunit beta [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951821|gb|AAT89522.1| ribonucleoside-diphosphate reductase, beta chain [Leifsonia xyli subsp. xyli str. CTCB07] Length = 329 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 47/124 (37%), Positives = 73/124 (58%), Gaps = 4/124 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLHL FGI++I + ENP L T EF + + M+ +A +E Y + +P G +GL Sbjct: 205 VRDESLHLKFGINLILTVLEENPDLQTPEFAAEIKQMILDAVEMEEQYNRDLLPGGILGL 264 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY---Q 117 NA QY++++A+RR ++G E +K + NP WM+ D + NFFE+ T Y Sbjct: 265 NANYINQYVKYLADRRLEELGFEAEYKVS-NPAKWMATANDTLELVNFFESTNTSYESNA 323 Query: 118 QGAE 121 + + Sbjct: 324 KASS 327 >gi|327312835|ref|YP_004328272.1| ribonucleoside-diphosphate reductase subunit beta [Prevotella denticola F0289] gi|326946303|gb|AEA22188.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella denticola F0289] Length = 348 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I ++K E P ++T + + M+ E EIA+ + GLN Sbjct: 220 RDENTHLWLFRSIILELKKEEPDMFTSDKIKVYEDMMREGVRQEIAWGQYVIGNDVQGLN 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y++++ N R +G L+ + P W+ + + + +FFE + T Y Sbjct: 280 EQMVSDYIRYLGNLRWSGLGFGFLYDDNRKEPENMKWVGQYSNANMVKTDFFEAKSTAYA 339 Query: 118 QGAELKWD 125 + L D Sbjct: 340 KSTALVDD 347 >gi|269864962|ref|XP_002651756.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|269866721|ref|XP_002652369.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220062645|gb|EED41686.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220063933|gb|EED42300.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] Length = 135 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + I + ++ EA +E + E++P +G+N Sbjct: 13 RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 63 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 QY++F+A+R +G + ++ + NPF +M E I L+ + NFFE R YQ+G Sbjct: 64 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 119 >gi|15613065|ref|NP_241368.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus halodurans C-125] gi|14195134|sp|Q9KFH7|RIR2_BACHD RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit gi|10173115|dbj|BAB04221.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus halodurans C-125] Length = 345 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 2/122 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH+ ++ ++ +E P L T+E + +T L +A LE + + G+N Sbjct: 217 RDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLMKAADLEKDWFRYIIGDKIPGIN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119 E Y+ FIAN+R Q+G+E + + NP W+ D+ + +FFE + +Y + Sbjct: 277 PEDMETYISFIANKRAVQLGMEKPYPEIKHNPMKWIRAYEDVNSGKSDFFEQKSRQYAKV 336 Query: 120 AE 121 + Sbjct: 337 SA 338 >gi|85375147|ref|YP_459209.1| ribonucleotide-diphosphate reductase subunit beta [Erythrobacter litoralis HTCC2594] gi|84788230|gb|ABC64412.1| ribonucleotide reductase beta subunit [Erythrobacter litoralis HTCC2594] Length = 356 Score = 137 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDESLH + + ++ E +TK ++ + ++ LE + G G Sbjct: 189 VRDESLHCEGIVRLFHEFVRER-DCYTKAVKEDIIDICQKSVRLEDNFIDLAFEMGPVSG 247 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + ++Y+++IA+ R Q+GL+P++ ++P PW++ +++ + NFFE R TEY +G Sbjct: 248 MTPKEIKKYIRYIADWRLGQLGLQPIYMVDDHPLPWLAPLLNGVEHANFFEQRATEYSKG 307 Query: 120 AE 121 A Sbjct: 308 AT 309 >gi|254418345|ref|ZP_05032069.1| ribonucleoside-diphosphate reductase, beta subunit [Brevundimonas sp. BAL3] gi|196184522|gb|EDX79498.1| ribonucleoside-diphosphate reductase, beta subunit [Brevundimonas sp. BAL3] Length = 349 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 2/122 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDESLH I + + E TK +E + G G Sbjct: 201 VRDESLHCEGIIKLYHAFNKETG-AVTKAVADDIVDCCKTVVNMEDRFIDLAFEMGSVQG 259 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + +QY++FIA+ R Q+ L ++ ENP PW+ ++ + NFFE R TEY + Sbjct: 260 MTPEDIKQYIRFIADWRLRQLKLPEVYGVKENPLPWLQSLLSGVEHANFFEARATEYSKA 319 Query: 120 AE 121 A Sbjct: 320 AT 321 >gi|255658865|ref|ZP_05404274.1| ribonucleoside-diphosphate reductase, beta subunit [Mitsuokella multacida DSM 20544] gi|260849270|gb|EEX69277.1| ribonucleoside-diphosphate reductase, beta subunit [Mitsuokella multacida DSM 20544] Length = 347 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +++ ++ E P L+T E ++ R M+ E EIA+ + GLN Sbjct: 219 RDENTHLWLFRNILRDLRAEEPDLFTPEREEMMREMIREGVRQEIAWGKYAIGNEVEGLN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENP--FPWMSEVIDLK-KEKNFFETRVTEYQ 117 E Y+ ++ N R IGL L++ E P W+S+ + + +F E R T Y Sbjct: 279 EKMIEDYVHYLGNARAESIGLGTLYEGFEEEPSSMRWVSQYANPNFIKTDFIEGRSTAYA 338 Query: 118 QGAELKWD 125 + L D Sbjct: 339 KSTALVDD 346 >gi|155122339|gb|ABT14207.1| hypothetical protein MT325_M653L [Paramecium bursaria chlorella virus MT325] Length = 326 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH FG + ++++ K + + ++ EA E + E +P +G+N Sbjct: 202 RDEGLHQQFGELLYSKLE-------NKLSLAQVKAIVEEAVANEKEFICEAIPCRMIGMN 254 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+A+R +G + T NPF +M E+I L+ + NFFE RV+EYQ+ Sbjct: 255 SELMGQYLEFVADRIFVALGHPKQYNAT-NPFDFM-ELISLEGKSNFFERRVSEYQRPGV 312 Query: 122 LK 123 + Sbjct: 313 MN 314 >gi|298207002|ref|YP_003715181.1| probable ribonucleoside-diphosphate reductase small chain [Croceibacter atlanticus HTCC2559] gi|83849636|gb|EAP87504.1| probable ribonucleoside-diphosphate reductase small chain [Croceibacter atlanticus HTCC2559] Length = 325 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 37/124 (29%), Positives = 68/124 (54%), Gaps = 8/124 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H +F + + N HL K +++ R ++ +A +E + E++P +G+N Sbjct: 198 RDEGMHCDFAVHL------HNKHLVNKVSKERIREIIVDALNIEREFITESLPASLIGMN 251 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY++F+ +R ++ E + T NPF +M +I L+ + NFFE RV +YQ+ Sbjct: 252 SNLMTQYLEFVTDRLLLELECEKEYN-TANPFDFMD-MISLQGKTNFFEKRVGDYQKAGV 309 Query: 122 LKWD 125 + D Sbjct: 310 MDQD 313 >gi|148273612|ref|YP_001223173.1| ribonucleotide-diphosphate reductase subunit beta [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|170782700|ref|YP_001711034.1| ribonucleotide-diphosphate reductase subunit beta [Clavibacter michiganensis subsp. sepedonicus] gi|147831542|emb|CAN02508.1| putative ribonucleoside-diphosphate reductase beta subunit [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|169157270|emb|CAQ02455.1| ribonucleoside-diphosphate reductase beta subunit [Clavibacter michiganensis subsp. sepedonicus] Length = 331 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 48/121 (39%), Positives = 74/121 (61%), Gaps = 1/121 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLHL FGI++I + ENP L T+EF + + M+ +A +E Y + +P G +GL Sbjct: 206 VRDESLHLKFGINLILTVLEENPDLQTEEFAAEIKQMILDAVEMEEQYNRDLLPNGILGL 265 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA QY++++A+RR ++G E +K + NP WM+ D + NFFE+ T Y+ A Sbjct: 266 NANYINQYVKYLADRRLEELGFEAEYKVS-NPAKWMATANDTLQLVNFFESTNTSYESNA 324 Query: 121 E 121 Sbjct: 325 S 325 >gi|333030473|ref|ZP_08458534.1| ribonucleotide reductase [Bacteroides coprosuis DSM 18011] gi|332741070|gb|EGJ71552.1| ribonucleotide reductase [Bacteroides coprosuis DSM 18011] Length = 347 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +++ E P L+T E + R M+ E E+A+ + + GL Sbjct: 219 RDENTHLWLFQSIILELRKEEPQLFTVEAIAEFRAMIKEGAEQEMAWGEYVIEEEIEGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-EKNFFETRVTEYQ 117 Y++++AN RC +G E L+ E+ W+++ + + +FFE + + Y Sbjct: 279 QEMVSDYIKYLANLRCENLGFEILYPGYEDEPASMSWVAQYSNANMIKTDFFEAKPSAYA 338 Query: 118 QGAELKWD 125 + + D Sbjct: 339 KSTSIIDD 346 >gi|299144102|ref|ZP_07037182.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518587|gb|EFI42326.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 346 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I ++K E L+T+E + + ML E EI + + G+ Sbjct: 218 RDENTHLWLFRNIIQELKKEEVELFTEERINEYKCMLMEGVRQEIEWGQYVIGDNIQGIT 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117 A + Y++++ N R IG LF N W+SE + + + +FFE +V+ Y Sbjct: 278 AQMVKDYIEYLGNLRSRSIGFGNLFDRNIEEPNSMKWVSEYSNPNEIKTDFFEGKVSAYS 337 Query: 118 QGAELKWD 125 + + + D Sbjct: 338 KSSVFEDD 345 >gi|160947324|ref|ZP_02094491.1| hypothetical protein PEPMIC_01258 [Parvimonas micra ATCC 33270] gi|158446458|gb|EDP23453.1| hypothetical protein PEPMIC_01258 [Parvimonas micra ATCC 33270] Length = 349 Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++ +++ E P L+T+E + M+ EIA+ + + GL Sbjct: 218 RDENTHLWLFKKMLLELQNEEPELFTEEKVAVYKDMIKTGVEQEIAWGKYVLGENIPGLT 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 E Y++++ N R + L+ Y E P W+SE D + +FFE + + Y Sbjct: 278 IQMVEDYIKYLGNLRSTALNFGKLYDGYDEEPESMKWVSEYSDPNAIKTDFFEAKPSAYS 337 Query: 118 QGAELKWD 125 + + + D Sbjct: 338 KSSVIDDD 345 >gi|306819883|ref|ZP_07453537.1| ribonucleotide-diphosphate reductase beta subunit [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304552130|gb|EFM40067.1| ribonucleotide-diphosphate reductase beta subunit [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 347 Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 66/128 (51%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++ ++K E H++T+E R M+ + EI +A + GL+ Sbjct: 219 RDENTHLWLFRSILLELKKEEAHIFTQENINLFRNMIKQGVEEEIRWAKYAIGDNIQGLS 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 E Y++++ N RC +G + +++ Y + P W+SE D + +FFE +V+ Y Sbjct: 279 MSMIEDYLKYLGNLRCKGLGFDNIYEGYEKEPESMSWVSEYSDPNAIKTDFFEAKVSAYA 338 Query: 118 QGAELKWD 125 + ++ D Sbjct: 339 KSTVIEDD 346 >gi|187778605|ref|ZP_02995078.1| hypothetical protein CLOSPO_02200 [Clostridium sporogenes ATCC 15579] gi|187772230|gb|EDU36032.1| hypothetical protein CLOSPO_02200 [Clostridium sporogenes ATCC 15579] Length = 342 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 70/126 (55%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I ++K ENP+++T+E +++ R M+ EI + +GLN Sbjct: 214 RDEVTHLVLFQNIIKELKSENPNIFTEELEEEFREMMRMGVEHEIKWGQYVTNNEILGLN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119 ++Y+++++N R IGL+PL+ + ++P W+ L + +FFE +VT Y + Sbjct: 274 DELIDKYIKYLSNLRLTAIGLKPLYPEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AVFDFD 339 >gi|11544904|emb|CAC17630.1| class I ribonucleotide-diphosphate reductase small subunit chain [Streptomyces jumonjinensis] Length = 322 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 38/111 (34%), Positives = 67/111 (60%), Gaps = 2/111 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+NF +V++ ++ E P L+ QQ+ ML EA E+ + + G G+N Sbjct: 213 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLQEAVEAELQFGSDLCGDGLPGMN 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 112 S +Y+Q +A++R ++G P++ +ENPF +M E+ +++ NFFE R Sbjct: 273 TESMREYLQCVADQRLTRLGFAPVY-GSENPFSFM-ELQGVQELTNFFERR 321 >gi|317122809|ref|YP_004102812.1| ribonucleoside-diphosphate reductase [Thermaerobacter marianensis DSM 12885] gi|315592789|gb|ADU52085.1| Ribonucleoside-diphosphate reductase [Thermaerobacter marianensis DSM 12885] Length = 336 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 43/121 (35%), Positives = 72/121 (59%), Gaps = 1/121 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 ++DESLHL+FGI +I + E+P L T EF ++ + ++ A LE Y +P+ +G+ Sbjct: 214 LKDESLHLSFGIHLITTLLEEHPELMTPEFAREVKGLILRAVELERDYNRALLPRPILGV 273 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A Y++++ +RR ++GL P F T NP WM+ +D+ + NFFE R Y+ A Sbjct: 274 SADYLNAYIEYVTDRRLDELGLGPHF-GTPNPAQWMATEVDVPEIVNFFEARNIHYEVAA 332 Query: 121 E 121 + Sbjct: 333 D 333 >gi|197103810|ref|YP_002129187.1| ribonucleoside-diphosphate reductase, beta subunit [Phenylobacterium zucineum HLK1] gi|196477230|gb|ACG76758.1| ribonucleoside-diphosphate reductase, beta subunit [Phenylobacterium zucineum HLK1] Length = 350 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 2/122 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDESLH I + + E T+ LE + G G Sbjct: 201 VRDESLHCEGIIKLYHAFNKETG-AVTQAVADDIVDCCKTVVGLEDKFIDLAFEAGEVQG 259 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + +QY++FIA+ R Q+ L ++ ENP PW+ ++ + NFFE R TEY + Sbjct: 260 MTPDDIKQYIRFIADWRLKQLHLPQVYGIKENPLPWLQSMLSGVEHANFFEARATEYSKA 319 Query: 120 AE 121 A Sbjct: 320 AT 321 >gi|295691241|ref|YP_003594934.1| Ribonucleoside-diphosphate reductase [Caulobacter segnis ATCC 21756] gi|295433144|gb|ADG12316.1| Ribonucleoside-diphosphate reductase [Caulobacter segnis ATCC 21756] Length = 346 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 2/122 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDESLH + I + + E TK LE + G G Sbjct: 198 IRDESLHCDGIIKLYHAFNKETG-AVTKAVADDIVDCCKHVVGLEDKFIDLAFEAGEIQG 256 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + + Y++FIA+ R Q+ L ++ ENP PW+ ++ + NFFE R TEY + Sbjct: 257 MTPDDIKSYIRFIADWRLRQLQLPEVYGVKENPLPWLQSLLSGVEHANFFEARATEYSKA 316 Query: 120 AE 121 A Sbjct: 317 AT 318 >gi|38683666|gb|AAR26843.1| FirrV-1-A19 [Feldmannia irregularis virus a] Length = 342 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH + + N +K P + +A LE + E++P +G+N Sbjct: 217 RDEGLHAEGSVMIYNHLKHRLP-------VAVVHDIFTDAVALEKEFIRESLPVSLIGIN 269 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A + Y++++++ ++G LF T+NPF WM+ +I ++ + NFFE RV EY + Sbjct: 270 ADTMSSYIEYVSDFWIQRLGYPKLF-GTKNPFEWMT-MIGMEGKSNFFEGRVAEYAKAGS 327 Query: 122 LK 123 + Sbjct: 328 MT 329 >gi|313793687|gb|EFS41718.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL110PA1] gi|327456018|gb|EGF02673.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL092PA1] Length = 328 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 43/120 (35%), Positives = 69/120 (57%), Gaps = 1/120 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLHL FG+++I + ENP + T EF + M+ + +E Y + +P+G G+ Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGIRGM 263 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA Y++++A+RR ++G EP ++ NP WM+ D + NFFE T Y+ A Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEYRVA-NPAKWMATANDTLQVVNFFEATNTSYEVNA 322 >gi|148554425|ref|YP_001262007.1| ribonucleotide-diphosphate reductase subunit beta [Sphingomonas wittichii RW1] gi|148499615|gb|ABQ67869.1| Ribonucleoside-diphosphate reductase [Sphingomonas wittichii RW1] Length = 350 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 2/122 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDE+LH + + + E L T + M + +E A+ G V G Sbjct: 189 IRDETLHCEGIVRLFHAFVKERDCL-TASVKDDILDMCQKTVRIEDAFIDLVFEMGPVNG 247 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + ++Y+++IA+ R Q+GL+P++ ++P PW++ +++ + NFFETR TEY + Sbjct: 248 MTPKDIKKYVRYIADWRLGQLGLKPIYMIEDHPLPWLAPLLNGVEHANFFETRATEYSKA 307 Query: 120 AE 121 A Sbjct: 308 AT 309 >gi|296082342|emb|CBI21347.3| unnamed protein product [Vitis vinifera] Length = 227 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 36/111 (32%), Positives = 64/111 (57%), Gaps = 6/111 (5%) Query: 17 QIKIENPH----LWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFI 72 QI IEN H L K +++ + ++ ++ +E + + +P VG+N+ QY++F+ Sbjct: 102 QIAIENIHSEILLRNKLSEERVKAIVADSVDIEREFVCDALPCALVGMNSALMSQYIEFV 161 Query: 73 ANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAELK 123 A+R +G ++ + NPF WM E+I L+ + NFFE RV EYQ+ + + Sbjct: 162 ADRLLGALGYGKMYNVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKASVMS 210 >gi|229495919|ref|ZP_04389645.1| ribonucleoside-diphosphate reductase, beta subunit [Porphyromonas endodontalis ATCC 35406] gi|229317232|gb|EEN83139.1| ribonucleoside-diphosphate reductase, beta subunit [Porphyromonas endodontalis ATCC 35406] Length = 346 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +++ E P L+T E + + M+ E L EIA+ + GL Sbjct: 218 RDENTHLWLFRSMILELRREQPELFTPEREAEFLEMIREGALQEIAWGKYVIGDEIEGLT 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-EKNFFETRVTEYQ 117 + Y+ ++AN R +GL +F E W+S+ + + +FFE + + Y Sbjct: 278 SQMVSDYIMYLANLRSANLGLGVIFPGHEEEPASMSWVSQYSNSNLIKTDFFEAKPSAYA 337 Query: 118 QGAELKWD 125 + A ++ D Sbjct: 338 KSASIEDD 345 >gi|255323570|ref|ZP_05364700.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter showae RM3277] gi|255299284|gb|EET78571.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter showae RM3277] Length = 340 Score = 136 bits (344), Expect = 8e-31, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+T E + K M A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRTERPDLFTPETEAKIYDMFERAGELEIKWGKYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 EQY++++ ++R IGL+ + +P W+ + +K NFFE +VT Y +G+ Sbjct: 276 DDIIEQYIRYLIDQRLVAIGLKRRYN-VPHPIKWVDDFAKFNDQKSNFFEAKVTNYSKGS 334 Query: 121 ELKWD 125 + +D Sbjct: 335 -ISFD 338 >gi|22788780|ref|NP_690492.1| Rr2 [Heliothis zea virus 1] gi|22671540|gb|AAN04367.1|AF451898_72 Rr2 [Heliothis zea virus 1] Length = 333 Score = 136 bits (344), Expect = 8e-31, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 65/120 (54%), Gaps = 6/120 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F I + P + + +K ++ +A +E + E++P +G+N Sbjct: 205 RDEGLHCDFAILLFRNYL--RPECRSSD--EKVINIVTDAVRIEQEFLTESLPVSMIGMN 260 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +Y++F+A+R +++ ++ +NPF +M+ I L+ + NFFE +V+EY++ Sbjct: 261 CKLMCEYIEFVADRLLYELIGRKIYN-AKNPFDFMTS-ISLEGKTNFFEKKVSEYKRYGV 318 >gi|149185037|ref|ZP_01863354.1| ribonucleotide reductase beta subunit [Erythrobacter sp. SD-21] gi|148831148|gb|EDL49582.1| ribonucleotide reductase beta subunit [Erythrobacter sp. SD-21] Length = 352 Score = 136 bits (344), Expect = 8e-31, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 2/122 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDESLH I + ++ E L TK ++ + + LE + G G Sbjct: 189 IRDESLHCEGIIRMFHEFVRERDCL-TKAVKEDIIDICQKTVRLEDNFIDLAFEMGPVSG 247 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + ++Y+++IA+ R Q+ L+P++ ++P PW++ +I+ + NFFE R TEY +G Sbjct: 248 MTPKDIKKYIRYIADWRLGQLNLDPIYMVDDHPLPWLAPLINGVEHANFFEQRATEYSKG 307 Query: 120 AE 121 A Sbjct: 308 AT 309 >gi|162452149|ref|YP_001614516.1| ribonucleotide-diphosphate reductase [Sorangium cellulosum 'So ce 56'] gi|161162731|emb|CAN94036.1| Ribonucleotide-diphosphate reductase [Sorangium cellulosum 'So ce 56'] Length = 339 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 2/122 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES H+ F +V++ + E P L+ + M+ EA E +A + + G G++ Sbjct: 213 RDESAHMRFAFEVVSTARREEPELFDAGLARSILDMMDEAIACEARFAEDLLGAGVAGMS 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A +Y++F A++R +G+ + +NPF +M + D+++ NFFE RV+ YQ G Sbjct: 273 ARDVRRYLEFCADQRLATLGMPKRY-GAKNPFSFMD-LQDVQEVTNFFERRVSAYQVGVS 330 Query: 122 LK 123 + Sbjct: 331 GE 332 >gi|118197598|ref|YP_874310.1| ribonucleotide reductase small subunit [Ecotropis obliqua NPV] gi|113472593|gb|ABI35800.1| ribonucleotide reductase small subunit [Ecotropis obliqua NPV] Length = 341 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 6/123 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F N + K Q+ +M EA +E + +P +G+N Sbjct: 217 RDEGLHTDFACMYYNNYIP----INEKLSPQQILSMFIEAVDIEKEFFTTALPCYLLGIN 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A +Y++F+A+R ++ F T NPF +M+ I L+ + NFFE RV EY++ Sbjct: 273 ATEMCKYIEFVADRLLVELRQPKHFN-TPNPFNFMT-NISLEGKTNFFERRVGEYKRFGA 330 Query: 122 LKW 124 + Sbjct: 331 GQD 333 >gi|157164305|ref|YP_001467763.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter concisus 13826] gi|112800348|gb|EAT97692.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter concisus 13826] Length = 340 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+T E + K M +A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFTPETEAKIYDMFEKAGNLEIKWGKYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 EQY+ ++ ++R IGL+ + +P W+ + +K NFFE +VT Y +G+ Sbjct: 276 DDIIEQYIHYLIDQRLVAIGLKRKYNVA-HPIKWVDDFAKFNDQKSNFFEAKVTNYSKGS 334 Query: 121 ELKWD 125 + +D Sbjct: 335 -ISFD 338 >gi|168186576|ref|ZP_02621211.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum C str. Eklund] gi|169295422|gb|EDS77555.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum C str. Eklund] Length = 342 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I ++K EN ++T+ ++ R M+ EI + +G+N Sbjct: 214 RDEITHLILFQNIIKELKNENLDIFTESIIEEFRMMMKTGVEHEIKWGQYVTNNEILGIN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119 E+Y+++++N R + IGLE L+ + TE+P W+ L + +FFE +VT Y + Sbjct: 274 NNLIEKYIKYLSNLRLNAIGLEVLYPEITEHPMEWIENFSKLNNTKTDFFEAKVTNYTKA 333 Query: 120 AELKWD 125 A +D Sbjct: 334 AAFDFD 339 >gi|329888543|ref|ZP_08267141.1| ribonucleotide reductase, small chain family protein [Brevundimonas diminuta ATCC 11568] gi|328847099|gb|EGF96661.1| ribonucleotide reductase, small chain family protein [Brevundimonas diminuta ATCC 11568] Length = 348 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 2/122 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDESLH I + + E TK +E + G V G Sbjct: 201 VRDESLHCEGIIKLYHAFNKETG-AVTKAVADDIVDCCKTVIEMEDKFIDLAFEMGPVNG 259 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + + Y++FIA+ R Q+ L ++ TENP PW+ ++ + NFFE R TEY + Sbjct: 260 MTPDDIKAYIRFIADWRLRQLHLPEVYGVTENPLPWLQALLSGVEHANFFEARATEYSKA 319 Query: 120 AE 121 A Sbjct: 320 AT 321 >gi|163955147|ref|YP_001648251.1| hypothetical protein OsV5_174r [Ostreococcus virus OsV5] gi|163638596|gb|ABY27955.1| hypothetical protein OsV5_174r [Ostreococcus virus OsV5] Length = 322 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 33/124 (26%), Positives = 64/124 (51%), Gaps = 12/124 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH F +++ ++ + ++ EA +E + + +P +G+N Sbjct: 201 RDEGLHQEFAVELFKTLR-------NRPGVDTIHAIVREAVEIEKGFILDALPCNLIGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +Y++++++R QIG+ ++ ++NPF +M E I L + NFFE RV +Y + Sbjct: 254 SEKMSEYIEYVSDRLLKQIGVPTIWN-SKNPFDFM-ENISLDGKTNFFEKRVGDY---GK 308 Query: 122 LKWD 125 L D Sbjct: 309 LDDD 312 >gi|268678691|ref|YP_003303122.1| ribonucleoside-diphosphate reductase [Sulfurospirillum deleyianum DSM 6946] gi|268616722|gb|ACZ11087.1| Ribonucleoside-diphosphate reductase [Sulfurospirillum deleyianum DSM 6946] Length = 340 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN K E P L+T + K M +A LEI + +G Sbjct: 216 RDEITHLLLFQNMINTTKKERPDLFTDALKAKVYEMFQKAGDLEIEWGKYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120 E Y+ ++ + R +G + L+ +P W+ + + NFFE V+ Y +G+ Sbjct: 276 DDIIETYIHYLVDDRLTAVGFDKLYN-ASHPIKWVDDFSKFNDQKTNFFEGNVSNYSKGS 334 Query: 121 ELKWD 125 L +D Sbjct: 335 -LSFD 338 >gi|87198296|ref|YP_495553.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium aromaticivorans DSM 12444] gi|87133977|gb|ABD24719.1| Ribonucleoside-diphosphate reductase [Novosphingobium aromaticivorans DSM 12444] Length = 351 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 2/122 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDESLH + + E L TK ++ + LE A+ +G G Sbjct: 189 VRDESLHCEGITRLFHAFVKERGCL-TKAVKEDIIDCCQKTVRLEDAFIDLAFEQGPVPG 247 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 ++A ++Y+++IA+ R Q+GL ++ ++P PW++ +++ + NFFETR TEY + Sbjct: 248 MSAKEIKRYIRYIADWRLSQLGLPAIYMIEDHPLPWLAPLLNGVEHANFFETRATEYSKA 307 Query: 120 AE 121 A Sbjct: 308 AT 309 >gi|16124515|ref|NP_419079.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter crescentus CB15] gi|221233200|ref|YP_002515636.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter crescentus NA1000] gi|13421393|gb|AAK22247.1| ribonucleoside-diphosphate reductase, beta subunit [Caulobacter crescentus CB15] gi|220962372|gb|ACL93728.1| ribonucleoside-diphosphate reductase beta chain [Caulobacter crescentus NA1000] Length = 347 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 2/122 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDESLH + I + + E TK +E + G G Sbjct: 198 IRDESLHCDGIIKLYHAFNKETG-AVTKAVADDIVDCCKTVVGMEDNFIDLAFEAGDIQG 256 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + + Y++F+A+ R Q+ L ++ ENP PW+ ++ + NFFE R TEY + Sbjct: 257 MTPDDIKAYIRFVADWRLRQLHLPEVYGVKENPLPWLQSLLSGVEHANFFEARATEYSKA 316 Query: 120 AE 121 A Sbjct: 317 AT 318 >gi|290343623|ref|YP_003494990.1| hypothetical protein OTV1_151 [Ostreococcus tauri virus 1] gi|260161038|emb|CAY39739.1| hypothetical protein OTV1_151 [Ostreococcus tauri virus 1] Length = 389 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 33/124 (26%), Positives = 64/124 (51%), Gaps = 12/124 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH F +++ ++ + ++ EA +E + + +P +G+N Sbjct: 268 RDEGLHQEFAVELFKTLR-------NRPGVDTIHAIVREAVDIEKGFILDALPCNLIGMN 320 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + +Y++++++R QIG+ ++ ++NPF +M E I L + NFFE RV +Y + Sbjct: 321 SEKMSEYIEYVSDRLLKQIGVPTIWN-SKNPFDFM-ENISLDGKTNFFEKRVGDY---GK 375 Query: 122 LKWD 125 L D Sbjct: 376 LDDD 379 >gi|289548460|ref|YP_003473448.1| ribonucleoside-diphosphate reductase [Thermocrinis albus DSM 14484] gi|289182077|gb|ADC89321.1| Ribonucleoside-diphosphate reductase [Thermocrinis albus DSM 14484] Length = 342 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H++ ++I +K ENP L+T E ++ + A EI + +G+N Sbjct: 218 RDELTHVSLFRNIILTLKKENPELFTPEMEKWVKEFFRYAASEEIKWGQYVTRNQILGIN 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119 ++Y++++AN R QIG EP+F TENP W+ + + +FF+ + Y + Sbjct: 278 DQLIDRYIKYLANLRLTQIGYEPVFPDVTENPMKWIDTFRTINDTKTDFFQAKPQTYAKR 337 Query: 120 AELKW 124 +ELKW Sbjct: 338 SELKW 342 >gi|313887688|ref|ZP_07821370.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846297|gb|EFR33676.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus harei ACS-146-V-Sch2b] Length = 346 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I ++K E P ++T E +K + ML + EIA+ + GLN Sbjct: 218 RDENTHLWLFRSIILEMKKEEPEIFTDENIEKYKEMLKKGVEEEIAWGKYVIGDEIKGLN 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117 E Y+ ++ N R +G LF W+SE D + + +FFE R + Y Sbjct: 278 EKMIEDYIMYLGNLRSRNLGFGNLFDENIDEPESMKWVSEYSDPNQIKTDFFEARPSAYS 337 Query: 118 QGAELKWD 125 + + ++ D Sbjct: 338 KSSVIEDD 345 >gi|254449372|ref|ZP_05062814.1| ribonucleoside-diphosphate reductase, beta subunit [gamma proteobacterium HTCC5015] gi|198261018|gb|EDY85321.1| ribonucleoside-diphosphate reductase, beta subunit [gamma proteobacterium HTCC5015] Length = 404 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 50/124 (40%), Positives = 65/124 (52%), Gaps = 3/124 (2%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDE +H +FG+ V QI E + R M E E YA + +G Sbjct: 284 MRDEVMHASFGLRVARQIMREENIQPDP---KAMREMWDECEAAEEGYARYLLRDPILGY 340 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A +FIANRR +++ LE F EN PW+ E +++KEKNFFETRVTEYQ G Sbjct: 341 SAEDHVNQFRFIANRRANKLSLEEPFPGAENALPWLDEQANMRKEKNFFETRVTEYQVGG 400 Query: 121 ELKW 124 L W Sbjct: 401 GLTW 404 >gi|332185556|ref|ZP_08387304.1| ribonucleotide reductase, small chain family protein [Sphingomonas sp. S17] gi|332014534|gb|EGI56591.1| ribonucleotide reductase, small chain family protein [Sphingomonas sp. S17] Length = 351 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 2/122 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDESLH I + + E L TK + LE + G V G Sbjct: 189 VRDESLHCEGIIQLFHAFTKERQCL-TKAVKDDIADQCQTTVRLEDNFIDLAFEMGPVNG 247 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + A ++Y+++IA+ R Q+GL+P++ E+P PW++ +++ + NFFETR TEY + Sbjct: 248 MTAKDIKKYIRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANFFETRATEYSKA 307 Query: 120 AE 121 A Sbjct: 308 AT 309 >gi|223039245|ref|ZP_03609535.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter rectus RM3267] gi|222879606|gb|EEF14697.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter rectus RM3267] Length = 340 Score = 135 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+T E + K M A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRTERPDLFTSEMEAKIYDMFKRAGELEIKWGKYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 EQY++++ ++R IGL+ + +P W+ + +K NFFE +VT Y +G+ Sbjct: 276 DDIIEQYIRYLIDQRLVAIGLKRRYD-ARHPIKWVDDFAKFNDQKSNFFEAKVTNYSKGS 334 Query: 121 ELKWD 125 + +D Sbjct: 335 -ISFD 338 >gi|315497476|ref|YP_004086280.1| ribonucleoside-diphosphate reductase [Asticcacaulis excentricus CB 48] gi|315415488|gb|ADU12129.1| Ribonucleoside-diphosphate reductase [Asticcacaulis excentricus CB 48] Length = 350 Score = 135 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 2/122 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDESLH I + + E TK LE + + G G Sbjct: 200 VRDESLHCEGIIKLYHAFNKETG-AVTKAVADDIVDCCKTVVSLEDKFIDLSFEMGPVEG 258 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + +QY+++IA+ R Q+ L +F ENP PW+ ++ + NFFE R TEY + Sbjct: 259 MTPDDIKQYIRYIADWRLRQLELPEVFGVQENPLPWLQVLLSGVEHANFFEARATEYSKA 318 Query: 120 AE 121 A Sbjct: 319 AT 320 >gi|329847182|ref|ZP_08262210.1| ribonucleotide reductase, small chain family protein [Asticcacaulis biprosthecum C19] gi|328842245|gb|EGF91814.1| ribonucleotide reductase, small chain family protein [Asticcacaulis biprosthecum C19] Length = 352 Score = 135 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 3/123 (2%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDESLH I + + E L TK Q +E + G G Sbjct: 200 VRDESLHCEGIIKLYHAFAKETKAL-TKSVQDDIIDCCKTVVTMEDKFIDLAFEMGPVQG 258 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + + Y+++IA+ R Q+ L ++ ENP PW+ ++ + NFFE R TEY + Sbjct: 259 MTPDDIKAYIRYIADWRLRQLNLPEVYGGVKENPLPWLQVLLSGVEHANFFEARATEYSK 318 Query: 119 GAE 121 A Sbjct: 319 AAT 321 >gi|281204152|gb|EFA78348.1| ribonucleotide reductase-related protein [Polysphondylium pallidum PN500] Length = 323 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 9/120 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH F + ++ L K + +++ +A E + +++P +G+N Sbjct: 199 RDEGLHCQFACLLYSK-------LVNKLDAKTIESIIRDAVDCEKEFITQSLPVDLIGMN 251 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +Y++F+A+ +G + ++ T NPF WM E+I + NFFE R T Y Sbjct: 252 NRLMSEYIEFVADHLIVALGYKKIYN-TANPFDWM-ELISIDTRTNFFEHRNTSYTIPGV 309 >gi|326386063|ref|ZP_08207687.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium nitrogenifigens DSM 19370] gi|326209288|gb|EGD60081.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium nitrogenifigens DSM 19370] Length = 351 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 2/122 (1%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH + E TK ++ + LE A+ +G G Sbjct: 189 VRDETLHCEGITRLFQAFVQER-DCMTKAVREDIIDCCQKTVRLEDAFIDLAFEQGPVPG 247 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 ++A ++Y+++IA+ R Q+G +P++ E+P PW++ +++ + NFFETR TEY + Sbjct: 248 MSAKEIKRYIRYIADWRLGQLGFQPIYMIEEHPLPWLTPLLNGVEHANFFETRATEYSKA 307 Query: 120 AE 121 A Sbjct: 308 AT 309 >gi|188588149|ref|YP_001919720.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium botulinum E3 str. Alaska E43] gi|251778737|ref|ZP_04821657.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|188498430|gb|ACD51566.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum E3 str. Alaska E43] gi|243083052|gb|EES48942.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 344 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 2/126 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++I +++ ENP +T + + + + M+ EI + H + G+N Sbjct: 218 RDENTHLWLFRNIIKELQSENPESFTTDLKNELKEMMRIGVENEILWGHYVIGDKIQGIN 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119 E Y++++ N+R +IGL LF+ ENP W+ V + + +FFE + T Y + Sbjct: 278 KKLIEDYIKYLGNKRLKEIGLGMLFEGFEENPATWVDVVANSNSVKTDFFEAKSTAYAKV 337 Query: 120 AELKWD 125 + L D Sbjct: 338 STLIDD 343 >gi|149916691|ref|ZP_01905193.1| putative ribonucleoside-diphosphate reductase beta chain [Plesiocystis pacifica SIR-1] gi|149822408|gb|EDM81797.1| putative ribonucleoside-diphosphate reductase beta chain [Plesiocystis pacifica SIR-1] Length = 356 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES H+ F VI+ ++ + P L+ E + M+ EA E+A+A + + G GL Sbjct: 230 RDESAHMAFAFSVIDVVRDQEPELFDAELEAAVVEMIEEAVACEVAFAEDLLGLGVAGLT 289 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 Y+++ A++R ++G+ + + NP +M E+ D+ + NFFE RV+ YQ G Sbjct: 290 VADLRAYLEYCADQRLQRLGMATRY-GSTNPLSFM-ELQDIPELANFFERRVSAYQHGVS 347 Query: 122 LKWD 125 D Sbjct: 348 GTID 351 >gi|11544907|emb|CAC17632.1| class I ribonucleotide-diphosphate reductase small chain [Streptomyces microflavus] Length = 321 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 37/111 (33%), Positives = 68/111 (61%), Gaps = 2/111 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+NF +V++ ++ E P L+ Q++ ML EA E+ + + +G G+N Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPELFDDALQEQVTAMLKEAVEAELQFGRDLCGEGLPGMN 271 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 112 S +Y+Q +A++R ++G P++ +ENPF +M E+ +++ NFFE R Sbjct: 272 TESMREYLQCVADQRLTRLGFAPVY-GSENPFAFM-ELQGVQELTNFFERR 320 >gi|313903043|ref|ZP_07836438.1| Ribonucleoside-diphosphate reductase [Thermaerobacter subterraneus DSM 13965] gi|313466767|gb|EFR62286.1| Ribonucleoside-diphosphate reductase [Thermaerobacter subterraneus DSM 13965] Length = 336 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 42/121 (34%), Positives = 71/121 (58%), Gaps = 1/121 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 ++DESLHL+FGI +I + E+P L T F ++ + ++ A LE Y +P+ +G+ Sbjct: 214 LKDESLHLSFGIHLITALLEEHPELMTPAFAREVKGLILRAVELERDYNRALLPRPILGV 273 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A Y++++ +RR ++GL P F T NP WM+ +D+ + NFFE R Y+ A Sbjct: 274 SADYLNAYVEYVTDRRLDELGLGPHF-GTPNPAKWMATEVDVPEIVNFFEARNIHYEVAA 332 Query: 121 E 121 + Sbjct: 333 D 333 >gi|73974200|ref|XP_858061.1| PREDICTED: similar to ribonucleotide reductase M2 B (TP53 inducible) isoform 3 [Canis familiaris] Length = 338 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 22/121 (18%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ A +E + E +P G +G+N Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++F+ ENPF +M E I L+ + NFFE RV EYQ+ A Sbjct: 279 CVLMKQYIEFVFQ--------------AENPFDFM-ENISLEGKTNFFEKRVAEYQRFAV 323 Query: 122 L 122 + Sbjct: 324 M 324 >gi|57505748|ref|ZP_00371674.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter upsaliensis RM3195] gi|57016021|gb|EAL52809.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter upsaliensis RM3195] Length = 340 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+ ++ K +M A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFNEQNIDKIYSMFKRAGELEIKWGKYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 E+Y+ ++ ++R I L+ ++ ++P W+ + +K NFFE++VT Y +G+ Sbjct: 276 DDIIEEYIHYLVDQRLIAINLDKIYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334 Query: 121 ELKWD 125 + +D Sbjct: 335 -ISFD 338 >gi|197322443|ref|YP_002154716.1| putative ribonucleotide reductase small subunit [Feldmannia species virus] gi|197130510|gb|ACH46846.1| putative ribonucleotide reductase small subunit [Feldmannia species virus] Length = 342 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH + + N +K P + +AT +E + E +P +G+N Sbjct: 217 RDEGLHAEGSVMIYNHLKHRLP-------VAVVHDIFGQATTIEKEFIREALPVSLIGIN 269 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A + Y+++I++ ++G LF ++NPF WM+ +I ++ + NFFE RV EY + Sbjct: 270 AGTMSTYIEYISDFWLEKLGYPKLFN-SKNPFEWMT-MIGMEGKSNFFEGRVAEYSKAGS 327 Query: 122 LK 123 + Sbjct: 328 MT 329 >gi|119360103|gb|ABL66780.1| At5g40942 [Arabidopsis thaliana] Length = 231 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 6/111 (5%) Query: 17 QIKIENPH----LWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFI 72 QI IEN H L TK + + + ++ +A +E + + + VG+N QY++F+ Sbjct: 103 QIAIENIHSEILLRTKFDEDRLKAIVCDAVEIEREFVCDALSCALVGMNRELMSQYIEFV 162 Query: 73 ANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAELK 123 A+R +G ++ T NPF WM E+I L+ + NFFE RV EYQ+ + + Sbjct: 163 ADRLLAALGCGKVYGVT-NPFDWM-ELISLQGKTNFFEKRVGEYQKASVMS 211 >gi|169824933|ref|YP_001692544.1| ribonucleotide-diphosphate reductase subunit beta [Finegoldia magna ATCC 29328] gi|167831738|dbj|BAG08654.1| ribonucleoside-diphosphate reductase beta subunit [Finegoldia magna ATCC 29328] Length = 354 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +K E P L+T+E + + M+ + EI +A + + GL+ Sbjct: 226 RDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGAEAEIEWAKYVIGEKIQGLS 285 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY--TENP-FPWMSEVIDLKK-EKNFFETRVTEYQ 117 E Y++++ N R +G ++ E P W+SE D K + +FFE + + Y Sbjct: 286 IKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIKTDFFEAKPSAYS 345 Query: 118 QGAELKWD 125 + A ++ D Sbjct: 346 KSAIIEDD 353 >gi|283955349|ref|ZP_06372848.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni subsp. jejuni 414] gi|283793109|gb|EFC31879.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni subsp. jejuni 414] Length = 340 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+ E K M +A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 E+Y+ ++ ++R I L+ L+ ++P W+ + +K NFFE++VT Y +G+ Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334 Query: 121 ELKWD 125 + +D Sbjct: 335 -ISFD 338 >gi|86149605|ref|ZP_01067835.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni subsp. jejuni CF93-6] gi|86151167|ref|ZP_01069382.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|86153704|ref|ZP_01071907.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni subsp. jejuni HB93-13] gi|88597173|ref|ZP_01100408.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|121613260|ref|YP_999944.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter jejuni subsp. jejuni 81-176] gi|157414529|ref|YP_001481785.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter jejuni subsp. jejuni 81116] gi|167004901|ref|ZP_02270659.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter jejuni subsp. jejuni 81-176] gi|218561895|ref|YP_002343674.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|283955655|ref|ZP_06373148.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni subsp. jejuni 1336] gi|315123818|ref|YP_004065822.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85839873|gb|EAQ57132.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni subsp. jejuni CF93-6] gi|85841514|gb|EAQ58761.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|85842665|gb|EAQ59877.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni subsp. jejuni HB93-13] gi|87250215|gb|EAQ73173.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|88190234|gb|EAQ94208.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|112359601|emb|CAL34386.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|157385493|gb|ABV51808.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter jejuni subsp. jejuni 81116] gi|283792880|gb|EFC31656.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni subsp. jejuni 1336] gi|284925507|gb|ADC27859.1| ribonucleoside-diphosphate reductase subunit beta [Campylobacter jejuni subsp. jejuni IA3902] gi|307747171|gb|ADN90441.1| Ribonucleoside-diphosphate reductase subunit beta [Campylobacter jejuni subsp. jejuni M1] gi|315017540|gb|ADT65633.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315928159|gb|EFV07477.1| ribonucleotide reductase, small chain family protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315932030|gb|EFV10983.1| ribonucleotide reductase, small chain family protein [Campylobacter jejuni subsp. jejuni 327] Length = 340 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+ E K M +A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 E+Y+ ++ ++R I L+ L+ ++P W+ + +K NFFE++VT Y +G+ Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334 Query: 121 ELKWD 125 + +D Sbjct: 335 -ISFD 338 >gi|205356539|ref|ZP_03223302.1| ribonucleoside diphosphate reductase beta chain [Campylobacter jejuni subsp. jejuni CG8421] gi|205345544|gb|EDZ32184.1| ribonucleoside diphosphate reductase beta chain [Campylobacter jejuni subsp. jejuni CG8421] Length = 340 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+ E K M +A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 E+Y+ ++ ++R I L+ L+ ++P W+ + +K NFFE++VT Y +G+ Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334 Query: 121 ELKWD 125 + +D Sbjct: 335 -ISFD 338 >gi|154174558|ref|YP_001409201.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter curvus 525.92] gi|112803525|gb|EAU00869.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter curvus 525.92] Length = 340 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+T E ++K M +A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRAERSDLFTPEMEEKIYDMFEKAGNLEIKWGRYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 E+Y+ ++ ++R IGL+ + ++P W+ + +K NFFE++VT Y +G+ Sbjct: 276 DDIIEEYIHYLVDQRLVAIGLKRKYN-AKHPIKWVDDFAKFNDQKSNFFESKVTNYSKGS 334 Query: 121 ELKWD 125 L +D Sbjct: 335 -LSFD 338 >gi|310831442|ref|YP_003970085.1| putative ribonucleoside-diphosphate reductase small subunit [Cafeteria roenbergensis virus BV-PW1] gi|309386626|gb|ADO67486.1| putative ribonucleoside-diphosphate reductase small subunit [Cafeteria roenbergensis virus BV-PW1] Length = 326 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 9/118 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H ++ I + + ++ K Q+K + M +A E + E++P +G+N Sbjct: 201 RDEGMHCDYSIMLYHMLQ-------NKLSQEKIQQMFKDAVETERIFICESLPCSLLGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 A EQY++F+A++ ++G +FK +NPF WM E I ++ + NFFE R T+YQ+ Sbjct: 254 ADLMEQYIKFVADQLIIKLGYNKIFK-VDNPFTWM-EAISIEGKTNFFEHRPTQYQRA 309 >gi|19074323|ref|NP_585829.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon cuniculi GB-M1] gi|51701822|sp|Q8SRR2|RIR2_ENCCU RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|19068965|emb|CAD25433.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon cuniculi GB-M1] Length = 325 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 11/118 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH F + +K + + + ++ +A +E + E++P +G+N Sbjct: 202 RDEGLHCEFACLLHYHLKKK---------CNRIKEVVMDAVEIEKKFLSESLPVNLIGMN 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +Y++F+A+R +G E ++ T NPF +M E I L + NFF+ R ++YQ+ Sbjct: 253 CNLMCRYIEFVADRLLENLGEERVYNAT-NPFDFM-ENISLVGKTNFFDKRESQYQKA 308 >gi|57237291|ref|YP_178304.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter jejuni RM1221] gi|148926379|ref|ZP_01810063.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter jejuni subsp. jejuni CG8486] gi|57166095|gb|AAW34874.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni RM1221] gi|145844771|gb|EDK21876.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter jejuni subsp. jejuni CG8486] gi|315057661|gb|ADT71990.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Campylobacter jejuni subsp. jejuni S3] Length = 340 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+ E K M +A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 E+Y+ ++ ++R I L+ L+ ++P W+ + +K NFFE++VT Y +G+ Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334 Query: 121 ELKWD 125 + +D Sbjct: 335 -ISFD 338 >gi|57168357|ref|ZP_00367491.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter coli RM2228] gi|305432773|ref|ZP_07401932.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter coli JV20] gi|57020165|gb|EAL56839.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter coli RM2228] gi|304444170|gb|EFM36824.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter coli JV20] Length = 340 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+ + K M +A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFNENNINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 E+Y+ ++ ++R I L+ ++ ++P W+ + +K NFFE++VT Y +G+ Sbjct: 276 DDIIEEYIHYLVDQRLVAINLDKIYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334 Query: 121 ELKWD 125 + +D Sbjct: 335 -ISFD 338 >gi|293401949|ref|ZP_06646089.1| ribonucleoside-diphosphate reductase, beta subunit [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304607|gb|EFE45856.1| ribonucleoside-diphosphate reductase, beta subunit [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 347 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +++ E P L+T ++ + ML EI + + GL Sbjct: 219 RDENTHLWLFRSMILELQKEEPQLFTPALVEEYKDMLRYGVEEEIRWGSYVIGNDIEGLT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117 +Y+ ++ N R +G L++ Y + P W+S + + +FFE R + Y Sbjct: 279 MQMVREYIYYLGNLRSTSLGFGTLYEGYEKEPASMEWVSMYANANLIKTDFFEARSSAYA 338 Query: 118 QGAELKWD 125 + + L D Sbjct: 339 KSSALVDD 346 >gi|303234233|ref|ZP_07320879.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia magna BVS033A4] gi|302494774|gb|EFL54534.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia magna BVS033A4] Length = 347 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +K E P L+T+E + + M+ + EI +A + + GL+ Sbjct: 219 RDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGAEAEIEWAKYVIGEKIQGLS 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY--TENP-FPWMSEVIDLKK-EKNFFETRVTEYQ 117 E Y++++ N R +G ++ E P W+SE D K + +FFE + + Y Sbjct: 279 IKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIKTDFFEAKPSAYS 338 Query: 118 QGAELKWD 125 + A ++ D Sbjct: 339 KSAIIEDD 346 >gi|302379704|ref|ZP_07268189.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia magna ACS-171-V-Col3] gi|302312611|gb|EFK94607.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia magna ACS-171-V-Col3] Length = 347 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +K E P L+T+E + + M+ + EI +A + + GL+ Sbjct: 219 RDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGAEAEIEWAKYVIGEKIQGLS 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY--TENP-FPWMSEVIDLKK-EKNFFETRVTEYQ 117 E Y++++ N R +G ++ E P W+SE D K + +FFE + + Y Sbjct: 279 IKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIKTDFFEAKPSAYS 338 Query: 118 QGAELKWD 125 + A ++ D Sbjct: 339 KSAIIEDD 346 >gi|194319980|pdb|2VUX|A Chain A, Human Ribonucleotide Reductase, Subunit M2 B gi|194319981|pdb|2VUX|B Chain B, Human Ribonucleotide Reductase, Subunit M2 B Length = 326 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 9/106 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N Sbjct: 230 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 282 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107 +QY++F+A+R ++G +F+ ENPF +M E I L+ + N Sbjct: 283 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTN 326 >gi|126664354|ref|ZP_01735338.1| Ribonucleotide reductase, beta subunit [Marinobacter sp. ELB17] gi|126630680|gb|EBA01294.1| Ribonucleotide reductase, beta subunit [Marinobacter sp. ELB17] Length = 352 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 47/124 (37%), Positives = 70/124 (56%), Gaps = 3/124 (2%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H +FG+ V+NQI E + + R M E+ E YA+ + +G Sbjct: 232 LRDEAMHFSFGLKVVNQILEEENISFDP---KAVRDMWDESEAAESDYANYILRDPILGY 288 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A + +F+ANRR + L F +N PW+ E ++KEKNFFETRV EYQ GA Sbjct: 289 SAEYHIEQFRFVANRRARTVNLPEPFPGAKNVSPWLEEQATMRKEKNFFETRVIEYQTGA 348 Query: 121 ELKW 124 +L+W Sbjct: 349 QLEW 352 >gi|237749822|ref|ZP_04580302.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter bilis ATCC 43879] gi|229374572|gb|EEO24963.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter bilis ATCC 43879] Length = 351 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 2/119 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL +I + E P L+T+ Q + M +A LE ++ +GL Sbjct: 226 RDEITHLTIFQQMIISTRKERPDLFTQALQDEVMEMFRQAVDLESSWGEYITQGQILGLT 285 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQG 119 A QY++++A++R + L+ T+NP W+ E ++ + NFFE +V Y +G Sbjct: 286 AKIIRQYIEYLADKRLKAVDYPILYN-TQNPIQWVDEQVNFNNQRTNFFEAKVRNYTRG 343 >gi|154149104|ref|YP_001405803.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter hominis ATCC BAA-381] gi|153805113|gb|ABS52120.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter hominis ATCC BAA-381] Length = 340 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+ + K M +A LEI + +GL Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFNDKNIAKIYEMFEKAGELEIKWGKYITQNQIMGLT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 E+Y+ ++ + R IGL + +P W+ + +K NFFE++VT Y +G+ Sbjct: 276 DEIIEEYIHYLVDNRLSAIGLNKKYN-ARHPIKWVDDFAKFNDQKSNFFESKVTNYSKGS 334 Query: 121 ELKWD 125 L +D Sbjct: 335 -LNFD 338 >gi|190572323|ref|YP_001970168.1| putative ribonucleotide diphosphate reductase, small chain [Stenotrophomonas maltophilia K279a] gi|190010245|emb|CAQ43853.1| putative ribonucleotide diphosphate reductase, small chain [Stenotrophomonas maltophilia K279a] Length = 339 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 42/126 (33%), Positives = 72/126 (57%), Gaps = 4/126 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES H+ F + + ++ E P L+ +E +Q+ ML EA E+ +A + + G G++ Sbjct: 213 RDESAHMEFAFESVRVVREEEPDLFDEEMKQQVYDMLAEAIECEVQFAEDVLSGGVAGIS 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119 QY+Q A++ ++G+E + NP P+M E+ D+++ NFFE RV+ YQ G Sbjct: 273 TRDMRQYLQHCADQHFAKLGMEKKYN-VRNPLPFM-ELQDVQELTNFFERRVSAYQVGVQ 330 Query: 120 AELKWD 125 E+ +D Sbjct: 331 GEVAFD 336 >gi|153952438|ref|YP_001397460.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter jejuni subsp. doylei 269.97] gi|152939884|gb|ABS44625.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni subsp. doylei 269.97] Length = 340 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN + E P L+ E K M +A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVHKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 E+Y+ ++ ++R I L+ L+ ++P W+ + +K NFFE++VT Y +G+ Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334 Query: 121 ELKWD 125 + +D Sbjct: 335 -ISFD 338 >gi|28493649|ref|NP_787810.1| ribonucleotide-diphosphate reductase subunit beta [Tropheryma whipplei str. Twist] gi|28572842|ref|NP_789622.1| ribonucleotide-diphosphate reductase subunit beta [Tropheryma whipplei TW08/27] gi|28410975|emb|CAD67360.1| ribonucleotide-diphosphate reductase small chain [Tropheryma whipplei TW08/27] gi|28476691|gb|AAO44779.1| ribonucleotide reductase beta chain [Tropheryma whipplei str. Twist] Length = 327 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 46/116 (39%), Positives = 69/116 (59%), Gaps = 1/116 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLHL FGI++I + ENP L T +F + R M+ +E Y H+ +P G +GL Sbjct: 205 VRDESLHLKFGINLILTVLEENPDLQTSDFADEIRGMIIAGVEMEEEYNHDLLPNGILGL 264 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 N+ QY++++A+RR ++G +P + T NP WM+ D + NFFE T Y Sbjct: 265 NSGYINQYVKYLADRRLEELGFDPEYNVT-NPAKWMATANDTFELVNFFEAINTSY 319 >gi|304321610|ref|YP_003855253.1| ribonucleoside-diphosphate reductase subunit beta [Parvularcula bermudensis HTCC2503] gi|303300512|gb|ADM10111.1| ribonucleoside-diphosphate reductase, beta subunit [Parvularcula bermudensis HTCC2503] Length = 340 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 3/126 (2%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDESLH + + ++ E L T LE + G G Sbjct: 197 IRDESLHCEGMVRLFHEFARETGAL-TPAVADDIVDCCKTVVDLEDKFIELAFEAGEVEG 255 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + + Y++ IA+ R Q+GL P+F +P PW+ E+++ + NFFE R TEY +G Sbjct: 256 MTPDDIKAYIRHIADWRLSQLGLPPVFAADNHPLPWLREILNGVEHANFFEARATEYSKG 315 Query: 120 AE-LKW 124 A +W Sbjct: 316 ATRGEW 321 >gi|254521240|ref|ZP_05133295.1| ribonucleoside-diphosphate reductase, beta subunit [Stenotrophomonas sp. SKA14] gi|219718831|gb|EED37356.1| ribonucleoside-diphosphate reductase, beta subunit [Stenotrophomonas sp. SKA14] Length = 339 Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 42/126 (33%), Positives = 71/126 (56%), Gaps = 4/126 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES H+ F + + ++ E P L+ E +Q+ ML EA E+ +A + + G G++ Sbjct: 213 RDESAHMEFAFESVRVVREEEPDLFDDEMKQQVYDMLAEAIECEVQFAEDVLSGGVAGIS 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119 QY+Q A++ ++G+E + NP P+M E+ D+++ NFFE RV+ YQ G Sbjct: 273 TRDMRQYLQHCADQHFAKLGMEKKYN-VRNPLPFM-ELQDVQELTNFFERRVSAYQVGVQ 330 Query: 120 AELKWD 125 E+ +D Sbjct: 331 GEVAFD 336 >gi|315637824|ref|ZP_07893014.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter upsaliensis JV21] gi|315482065|gb|EFU72679.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter upsaliensis JV21] Length = 340 Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+ ++ K +M A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFNEQNIDKIYSMFKRAGELEIKWGKYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 E+Y+ ++ ++R I L+ ++ ++P W+ + +K NFFE++VT Y +G+ Sbjct: 276 DDIIEEYIHYLVDQRLIAINLDRIYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334 Query: 121 ELKWD 125 + +D Sbjct: 335 -ISFD 338 >gi|297587320|ref|ZP_06945965.1| ribonucleotide-diphosphate reductase beta subunit [Finegoldia magna ATCC 53516] gi|297575301|gb|EFH94020.1| ribonucleotide-diphosphate reductase beta subunit [Finegoldia magna ATCC 53516] Length = 354 Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL +I +K E P L+T+E + + M+ + + EI +A + + GL+ Sbjct: 226 RDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGSEAEIEWAKYVIGEKIQGLS 285 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY--TENP-FPWMSEVIDLKK-EKNFFETRVTEYQ 117 E Y++++ N R +G ++ E P W+SE D K + +FFE + + Y Sbjct: 286 IKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIKTDFFEAKPSAYS 345 Query: 118 QGAELKWD 125 + A ++ D Sbjct: 346 KSAIIEDD 353 >gi|62866936|gb|AAY17359.1| ribonucleotide reductase small subunit [Haemonchus contortus] Length = 374 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 9/121 (7%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DE +H + I IK K Q++ ++ +A +E + E++P +G+N Sbjct: 250 DEGVHAISHVCCIQHIK-------NKLSQERIYYIIRDAVAIEQEFLSESLPVDMIGMNC 302 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122 QY++++A+ ++G E + K ++NPF +M E I + + NFFE +V+EYQ+ L Sbjct: 303 RLMCQYIEYVADHLLVELGCEKICK-SKNPFDFM-ENISIDGKTNFFEKKVSEYQRPGVL 360 Query: 123 K 123 Sbjct: 361 S 361 >gi|160915703|ref|ZP_02077911.1| hypothetical protein EUBDOL_01712 [Eubacterium dolichum DSM 3991] gi|158432179|gb|EDP10468.1| hypothetical protein EUBDOL_01712 [Eubacterium dolichum DSM 3991] Length = 353 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 4/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ HL ++ ++K E P L+T E + + ML E+ +A + + GL Sbjct: 225 RDENTHLWLFRSILLELKKEEPQLFTPEHIEIYKGMLKHGVEEEVKWAEYVLGERMEGLT 284 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLK-KEKNFFETRVTEYQ 117 Y+ ++ N R + +G L+ Y + P W+S + + +FFE + T Y Sbjct: 285 MEMVADYIHYLGNLRSNALGFGSLYDGYEKEPASMEWVSMYSNANIIKTDFFEAKSTAYA 344 Query: 118 QGAELKWD 125 + + L D Sbjct: 345 KSSALVDD 352 >gi|83859670|ref|ZP_00953190.1| ribonucleotide-diphosphate reductase beta subunit [Oceanicaulis alexandrii HTCC2633] gi|83852029|gb|EAP89883.1| ribonucleotide-diphosphate reductase beta subunit [Oceanicaulis alexandrii HTCC2633] Length = 348 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 3/126 (2%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDESLH + + + E L TK + LE + G G Sbjct: 197 VRDESLHCEGMMKLFHTFAEETGAL-TKGVKDDIADCCKTVVSLEDKFIELAFEAGEVEG 255 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + + Y+++IA+ R Q+ L ++ E+P PW++E+++ + NFFE R TEY +G Sbjct: 256 MTPEDIKNYIRYIADWRMKQLKLPTIYGVEEHPIPWLTEILNGVEHANFFEARATEYSKG 315 Query: 120 A-ELKW 124 A + W Sbjct: 316 ATQGDW 321 >gi|158430770|pdb|2RCC|A Chain A, Crystal Structure Of Putative Class I Ribonucleotide Reductase (Np_241368.1) From Bacillus Halodurans At 1.90 A Resolution gi|158430771|pdb|2RCC|B Chain B, Crystal Structure Of Putative Class I Ribonucleotide Reductase (Np_241368.1) From Bacillus Halodurans At 1.90 A Resolution gi|158430772|pdb|2RCC|C Chain C, Crystal Structure Of Putative Class I Ribonucleotide Reductase (Np_241368.1) From Bacillus Halodurans At 1.90 A Resolution Length = 346 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 2/122 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH+ ++ ++ +E P L T+E + +T L +A LE + + G+N Sbjct: 218 RDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLXKAADLEKDWFRYIIGDKIPGIN 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119 E Y+ FIAN+R Q+G E + + NP W+ D+ + +FFE + +Y + Sbjct: 278 PEDXETYISFIANKRAVQLGXEKPYPEIKHNPXKWIRAYEDVNSGKSDFFEQKSRQYAKV 337 Query: 120 AE 121 + Sbjct: 338 SA 339 >gi|320107274|ref|YP_004182864.1| Ribonucleoside-diphosphate reductase [Terriglobus saanensis SP1PR4] gi|319925795|gb|ADV82870.1| Ribonucleoside-diphosphate reductase [Terriglobus saanensis SP1PR4] Length = 346 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 40/118 (33%), Positives = 67/118 (56%), Gaps = 2/118 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES HL F +V+ ++ + P LW E +++ M+ EA E +A + + G GL+ Sbjct: 220 RDESAHLEFAFEVVQVVRAQEPDLWDTELERQVVVMMEEAIDAEAQFAEDLLSGGVAGLS 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 QY+ ++A+ R ++G+ F +NPF +M E+ D+++ NFFE RV+ YQ Sbjct: 280 VRDMRQYLGYVADSRLERLGIGAHFN-AKNPFSFM-ELQDVQELTNFFERRVSAYQTA 335 >gi|238023979|ref|YP_002908211.1| Ribonucleotide reductase subunit beta [Burkholderia glumae BGR1] gi|237878644|gb|ACR30976.1| Ribonucleotide reductase, beta subunit [Burkholderia glumae BGR1] Length = 337 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 52/124 (41%), Positives = 66/124 (53%), Gaps = 3/124 (2%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDE LH FGI VI Q+ E HL + + EA E AYA + +G Sbjct: 216 MRDEVLHCGFGIRVIRQLLEEE-HLRLDPH--AVQQIWEEAEAAERAYAQYILRDPILGY 272 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A + +FIANRR Q+ + F N PW+ E +L+KEKNFFETRVT+YQ G Sbjct: 273 SAELHCEQFRFIANRRATQLSMPAPFPGATNALPWLDEQANLRKEKNFFETRVTDYQSGG 332 Query: 121 ELKW 124 L W Sbjct: 333 ALDW 336 >gi|291239432|ref|XP_002739627.1| PREDICTED: hCG23833-like [Saccoglossus kowalevskii] Length = 309 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 9/117 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH F + +IK P K R ++ E +E + + K +G+N Sbjct: 190 RDEGLHCTFACTMYGKIKPRLPD-------TKVRKIVLEGCEVEKLFVKHALRKPLLGMN 242 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + E Y+ F+ + +G E F NPFP+M I ++ + NFFE RVTEY + Sbjct: 243 SHLMETYVNFVTDNLLTDLGYEKEF-GVNNPFPFMD-NISMQGKTNFFERRVTEYTR 297 >gi|222824493|ref|YP_002576067.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter lari RM2100] gi|222539714|gb|ACM64815.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter lari RM2100] Length = 340 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+ K M +A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRKERADLFNDTNVSKIYDMFKKAGELEIKWGKYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 E+Y+ ++ ++R I L+ ++ ++P W+ + +K NFFE++VT Y +G+ Sbjct: 276 DDIIEEYIHYLVDQRLIAINLDKIYN-VKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334 Query: 121 ELKWD 125 L +D Sbjct: 335 -LSFD 338 >gi|221633388|ref|YP_002522613.1| ribonucleotide-diphosphate reductase subunit beta [Thermomicrobium roseum DSM 5159] gi|221156578|gb|ACM05705.1| ribonucleoside-diphosphate reductase, beta subunit [Thermomicrobium roseum DSM 5159] Length = 328 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 44/121 (36%), Positives = 70/121 (57%), Gaps = 1/121 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 ++DESLHL+FGI +I I E+P + + F ++ R ++ A LE AY +P+ +GL Sbjct: 207 LKDESLHLSFGIHLITTILEEHPEIMSAAFGRQLRELILRAVELEEAYNRAVLPEPLIGL 266 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 +A +Y+++IA+RR ++GL F NP WM +D+ + NFFE R Y+ G Sbjct: 267 DADVLNRYVRYIADRRLEELGLPIAF-GEPNPLRWMVAQVDMPEIVNFFEARNIHYEVGR 325 Query: 121 E 121 Sbjct: 326 A 326 >gi|56555145|gb|AAV98100.1| RR2 protein [Shrimp white spot syndrome virus] Length = 328 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 8/111 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F ++ + ++ P +++ ++ EA +E + ++P VG+N Sbjct: 226 RDEGLHRDFACMLLKKGFVDTP------SRERILEIVTEAVRIEQEFLTVSLPVKLVGMN 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 112 QY++F+A++ ++GLE + T NPFP+M I L+ + NFFE R Sbjct: 280 CKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMD-NISLENKTNFFEKR 328 >gi|297736972|emb|CBI26173.3| unnamed protein product [Vitis vinifera] Length = 312 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 9/102 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ + P QK ++HEA +E + E +P +G+N Sbjct: 171 RDEGLHCDFACLLYSLLQKQLPW-------QKVHHIVHEAVEIETQFVCEALPCALIGMN 223 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK 103 A QY++F+A+R +G E + ENPF WM E I L+ Sbjct: 224 ATLMSQYIKFVADRLLVALGYERKYN-VENPFDWM-EFISLQ 263 >gi|163781846|ref|ZP_02176846.1| ribonucleotide reductase beta chain [Hydrogenivirga sp. 128-5-R1-1] gi|159883066|gb|EDP76570.1| ribonucleotide reductase beta chain [Hydrogenivirga sp. 128-5-R1-1] Length = 350 Score = 130 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 2/125 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++I ++ E P L++ E ++ A EI + +G+N Sbjct: 226 RDELTHVTLFRNMILNLQKEQPELFSPEIKKWIAEYFRYAIDQEIKWGQYVTQDQILGIN 285 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119 ++Y++++ N R QIGLEPL+ + TENP W+ + + + +FF+ + Y + Sbjct: 286 NQLIDRYIKYLGNLRITQIGLEPLYPEITENPMKWIDDFRKINNTKTDFFQRKPQTYAKA 345 Query: 120 AELKW 124 ELKW Sbjct: 346 NELKW 350 >gi|317062933|ref|ZP_07927418.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium ulcerans ATCC 49185] gi|313688609|gb|EFS25444.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium ulcerans ATCC 49185] Length = 353 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 36/130 (27%), Positives = 67/130 (51%), Gaps = 9/130 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +I+ ENP + E + +M +A EI + + + +G+ Sbjct: 225 RDELSHVVIFQHLLKEIRNENPDFFNDE---EIYSMFRKAVEQEINWTNHIIGNQILGIT 281 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK----EKNFFETRVTEY 116 + EQY +++AN R IGL+P+++ +NP+ +++ D + + NFFE VT Y Sbjct: 282 EETTEQYTKWLANERLRSIGLKPIYEGFNKNPYKHLTKFADTEGEGNVKANFFEGTVTSY 341 Query: 117 QQGAELK-WD 125 + + WD Sbjct: 342 NMSSSIDGWD 351 >gi|15606660|ref|NP_214040.1| ribonucleotide reductase beta chain [Aquifex aeolicus VF5] gi|18202109|sp|O67475|RIR2_AQUAE RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit; Contains: RecName: Full=Aae nrdB intein; AltName: Full=Aae RIR2 intein gi|2983879|gb|AAC07431.1| ribonucleotide reductase beta chain [Aquifex aeolicus VF5] Length = 696 Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 2/120 (1%) Query: 7 HLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCE 66 H+ ++IN ++ ENP L+T E ++ A EI + +G+N E Sbjct: 577 HVTLFRNIINTLRKENPELFTPEIEKWIVEYFKYAVNEEIKWGQYVTQNQILGINDVLIE 636 Query: 67 QYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGAELKW 124 +Y++++ N R QIG +P++ + TENP W+ E + + +FF+ + Y + ELKW Sbjct: 637 RYIKYLGNLRITQIGFDPIYPEVTENPLKWIDEFRKINNTKTDFFQAKPQTYSKANELKW 696 >gi|319942042|ref|ZP_08016361.1| ribonucleoside-diphosphate reductase subunit beta [Sutterella wadsworthensis 3_1_45B] gi|319804426|gb|EFW01304.1| ribonucleoside-diphosphate reductase subunit beta [Sutterella wadsworthensis 3_1_45B] Length = 344 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 2/119 (1%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LN 61 DE+LH + + ENP LWT E + K + LE + + L Sbjct: 213 DETLHTESMTKIFREYITENPELWTDELKAKIYGIAEVMVDLEDKFIDLAFGVSEMKRLT 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 Y+++IA+RR +GL+ +FK T NP PW+ ++ NFFE RV +Y +GA Sbjct: 273 REDVRSYIRYIADRRLMGLGLKGIFKSTTNPLPWVDAML-GVTHTNFFENRVVDYAKGA 330 >gi|313836278|gb|EFS73992.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL037PA2] gi|314928743|gb|EFS92574.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL044PA1] gi|314971220|gb|EFT15318.1| ribonucleoside-diphosphate reductase, beta subunit [Propionibacterium acnes HL037PA3] gi|328906508|gb|EGG26283.1| ribonucleotide-diphosphate reductase subunit beta [Propionibacterium sp. P08] Length = 324 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 45/120 (37%), Positives = 71/120 (59%), Gaps = 5/120 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLHL FG+++I + ENP + T EF + M+ + +E Y + +P+G G+ Sbjct: 204 VRDESLHLKFGMNLILTVLEENPDIATDEFAVEIHDMILKGVEMEAQYNRDMLPRGIPGM 263 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 NA Y++++A+RR ++GLEP + + NP WM+ D + NFFET T Y+ A Sbjct: 264 NA----DYVKYLADRRLEELGLEPEY-HVANPAKWMATANDTLQLVNFFETTNTSYEVNA 318 >gi|257468678|ref|ZP_05632772.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium ulcerans ATCC 49185] Length = 348 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 36/130 (27%), Positives = 67/130 (51%), Gaps = 9/130 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +I+ ENP + E + +M +A EI + + + +G+ Sbjct: 220 RDELSHVVIFQHLLKEIRNENPDFFNDE---EIYSMFRKAVEQEINWTNHIIGNQILGIT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK----EKNFFETRVTEY 116 + EQY +++AN R IGL+P+++ +NP+ +++ D + + NFFE VT Y Sbjct: 277 EETTEQYTKWLANERLRSIGLKPIYEGFNKNPYKHLTKFADTEGEGNVKANFFEGTVTSY 336 Query: 117 QQGAELK-WD 125 + + WD Sbjct: 337 NMSSSIDGWD 346 >gi|253582918|ref|ZP_04860136.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium varium ATCC 27725] gi|251835124|gb|EES63667.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium varium ATCC 27725] Length = 348 Score = 129 bits (326), Expect = 9e-29, Method: Composition-based stats. Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 9/130 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +I+ ENP + E + M +A EI + + + +G+ Sbjct: 220 RDELSHVVIFQHLLKEIRNENPDFFNDE---EIYDMFRKAVEQEINWTNHIIGNQILGIT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK----EKNFFETRVTEY 116 + EQY +++AN R IGL+P++ +NP+ +++ D + + NFFE VT Y Sbjct: 277 EETTEQYTKWLANERLRSIGLKPIYDGFNKNPYKHLTKFADTEGEGNVKANFFEGTVTSY 336 Query: 117 QQGAELK-WD 125 + + WD Sbjct: 337 NMSSSIDGWD 346 >gi|323487827|ref|ZP_08093085.1| ribonucleotide-diphosphate reductase subunit beta [Planococcus donghaensis MPA1U2] gi|323398561|gb|EGA91349.1| ribonucleotide-diphosphate reductase subunit beta [Planococcus donghaensis MPA1U2] Length = 348 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 6/124 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F I + ENP L T E Q T + +A LE +A + GL+ Sbjct: 220 RDEMQHAYFIAQFIRIMLTENPELHTDENIQYIYTTIDKAVQLEKEWAQYIL-ADIEGLD 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM----SEVIDLKKEKNFFETRVTEYQ 117 +Y++++AN+R Q+GL+ L++ NP PW+ ++++ + +FFE + Y Sbjct: 279 LVEFGEYVEYLANKRLRQLGLDNLYEERSNPMPWIQVFGDDMMN-DTKSDFFEQKSRTYT 337 Query: 118 QGAE 121 + ++ Sbjct: 338 KVSQ 341 >gi|303389600|ref|XP_003073032.1| ribonucleoside-diphosphate reductase small subunit [Encephalitozoon intestinalis ATCC 50506] gi|303302176|gb|ADM11672.1| ribonucleoside-diphosphate reductase small subunit [Encephalitozoon intestinalis ATCC 50506] Length = 326 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 61/118 (51%), Gaps = 10/118 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH F + + K+ ++ + ++ +A +E + E++P +G+N Sbjct: 202 RDEGLHCEFACLLHRRYL--------KQKCKRVKEVVMDAVEVEKRFLSESLPVDLIGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +Y++F+A+ + E ++ +T NPF +M E I L + NFF+ R ++YQ+ Sbjct: 254 CQLMCKYIEFVADTLLENLEEEKIY-HTPNPFDFM-ENISLVGKTNFFDKRESQYQKA 309 >gi|328950373|ref|YP_004367708.1| Ribonucleoside-diphosphate reductase [Marinithermus hydrothermalis DSM 14884] gi|328450697|gb|AEB11598.1| Ribonucleoside-diphosphate reductase [Marinithermus hydrothermalis DSM 14884] Length = 332 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 43/119 (36%), Positives = 70/119 (58%), Gaps = 1/119 (0%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 ++DESLHL+FG+ +I E + T ++ R ++ EA LE AY +P+ +GL Sbjct: 211 LKDESLHLSFGLHLITGFLEEYSEVMTPRLAREVRGLILEAVQLERAYNQALLPRPILGL 270 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +A + Y++++A+RR ++GLE F T NP WM+ +D+ + NFFE T Y+ G Sbjct: 271 SAETLNAYVEYVADRRLEELGLEAAF-GTPNPAKWMATEVDVPEIVNFFEAVNTSYEVG 328 >gi|257458932|ref|ZP_05624052.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter gracilis RM3268] gi|257443636|gb|EEV18759.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter gracilis RM3268] Length = 340 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 3/125 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E L+ K K M A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRKERADLFNKRNVDKIYEMFETAGNLEIDWGKYITDNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120 E+Y+ ++ ++R IGLE + ++P W+ + +K NFFE++VT Y +G+ Sbjct: 276 DDIIEEYIHYLVDQRLLAIGLEKRYD-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334 Query: 121 ELKWD 125 L +D Sbjct: 335 -LSFD 338 >gi|224372455|ref|YP_002606827.1| ribonucleotide-diphosphate reductase subunit beta [Nautilia profundicola AmH] gi|223589410|gb|ACM93146.1| ribonucleoside-diphosphate reductase, beta subunit [Nautilia profundicola AmH] Length = 346 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 3/122 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H ++ +IK E P L+T E + + ML+ A LE + +G++ Sbjct: 219 RDEVTHTLLFANIFKEIKKEFPDLFTPEVIKNIKDMLYAAYELERDWGWYITNDEILGMS 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKK-EKNFFETRVTEYQQ 118 +++ Q++AN+R +GL+ LF +NP W + + NFFE V Y + Sbjct: 279 KELIDRFTQYLANKRAQAMGLDLLFPEVGLKNPISWFDGFSSFNEQKTNFFEGNVVNYSK 338 Query: 119 GA 120 G+ Sbjct: 339 GS 340 >gi|288554979|ref|YP_003426914.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus pseudofirmus OF4] gi|288546139|gb|ADC50022.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus pseudofirmus OF4] Length = 344 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 2/122 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH+ +V ++ E+P L +E + + L A LE+ + + + + G+ Sbjct: 216 RDEQLHVYLFTNVFKELLEEHPELNNREMESFVKQSLTTAVELELKWYNYIIGEQIEGVT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119 + Y++FIAN+R Q+G + +F ++ N F W+ D+ + +FFE + +Y + Sbjct: 276 SDEMGSYLKFIANKRAKQLGYDHIFPEHRTNVFKWIKAYEDVNAAKSDFFEQKSRQYAKV 335 Query: 120 AE 121 + Sbjct: 336 SS 337 >gi|269105083|ref|ZP_06157778.1| ribonucleotide reductase 2 [Photobacterium damselae subsp. damselae CIP 102761] gi|268160718|gb|EEZ39216.1| ribonucleotide reductase 2 [Photobacterium damselae subsp. damselae CIP 102761] Length = 310 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 10/126 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + K QQ+ + EA +E + E +P +G+N Sbjct: 190 RDEGLHFSFSALLFKTLGQG------KVTQQEFEEICREAVSIEKEFVTEALPVDLIGMN 243 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119 A QY++ A+ G +P+F Y +NPF +M ++D++ + NFFE RVTEY++ Sbjct: 244 AELMCQYIEHTADVIAGLFGFDPIF-YAKNPFDYM-RLLDMEGKTNFFEKRVTEYKRPQD 301 Query: 120 AELKWD 125 +L +D Sbjct: 302 RQLSFD 307 >gi|323143005|ref|ZP_08077711.1| ribonucleoside-diphosphate reductase, beta subunit [Succinatimonas hippei YIT 12066] gi|322417199|gb|EFY07827.1| ribonucleoside-diphosphate reductase, beta subunit [Succinatimonas hippei YIT 12066] Length = 331 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 3/124 (2%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGLN 61 DE+LH I + + +NP LW + + ++ + LE ++ L Sbjct: 201 DETLHTESMIKLFREYIEQNPQLWNDDLKSTIYSIAEKMVELEDSFIDLAFGVNQMQKLA 260 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA- 120 ++Y++FIA+RR +G++ +F +NP PW+ ++ NFFE RV +Y +GA Sbjct: 261 KEDVKKYIRFIADRRLSAMGMKAIFNEKKNPLPWVDAML-GVTHTNFFENRVVDYAKGAL 319 Query: 121 ELKW 124 W Sbjct: 320 SGDW 323 >gi|149194868|ref|ZP_01871962.1| ribonucleotide-diphosphate [Caminibacter mediatlanticus TB-2] gi|149135027|gb|EDM23509.1| ribonucleotide-diphosphate [Caminibacter mediatlanticus TB-2] Length = 346 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 3/122 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H ++ +IK E P L+T E + + ML+ A LE + +GL+ Sbjct: 219 RDEVTHTLLFANIFKEIKKEFPDLFTPEVIRNIKDMLYAAYELERDWGFYITNDEILGLS 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK--YTENPFPWMSEVIDLKK-EKNFFETRVTEYQQ 118 +++ +++AN+R H +GLE LF +NP W + + NFFE V Y + Sbjct: 279 KELIDRFTKYLANKRAHAMGLELLFPEIGLKNPISWFDSFSSFNEQKTNFFEGNVVNYSK 338 Query: 119 GA 120 G+ Sbjct: 339 GS 340 >gi|269963257|ref|ZP_06177590.1| hypothetical protein VME_39740 [Vibrio harveyi 1DA3] gi|269832005|gb|EEZ86131.1| hypothetical protein VME_39740 [Vibrio harveyi 1DA3] Length = 310 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 10/126 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + K QQ+ + EA +E + E +P +G+N Sbjct: 190 RDEGLHFSFSALLFKTLGQG------KVTQQEFEEICREAVSIEKEFVTEALPVDLIGMN 243 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119 A QY++ A+ G P+F ENPF +M ++D++ + NFFE RVTEY++ Sbjct: 244 AELMCQYIEHTADVIAGLFGFTPIF-GAENPFDYM-RLLDMEGKTNFFEKRVTEYKRPQD 301 Query: 120 AELKWD 125 +L +D Sbjct: 302 RQLSFD 307 >gi|488081|gb|AAA56996.1| ribonucleoside-diphosphate reductase small subunit [Drosophila melanogaster] Length = 214 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 56/104 (53%), Gaps = 9/104 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + +++ ++ +A +E + + +P +G+N Sbjct: 120 RDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMN 172 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE 105 QY++F+A+R ++G+ ++ T+NPF +M E+I L + Sbjct: 173 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGK 214 >gi|330998673|ref|ZP_08322403.1| ribonucleoside-diphosphate reductase, beta subunit [Parasutterella excrementihominis YIT 11859] gi|329576534|gb|EGG58042.1| ribonucleoside-diphosphate reductase, beta subunit [Parasutterella excrementihominis YIT 11859] Length = 327 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 5/126 (3%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV---G 59 DE+LH I + + IENP LWT +++ + + LE A+ + Sbjct: 193 DETLHTESMIRLFREYIIENPELWTDSLKKRIYDIAEKMIELEDAFIDLAFGVNDMSKQN 252 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L+ + Y+++I +RR +G++ +FK NP PW+ ++ NFFE RV +Y +G Sbjct: 253 LSPADVKAYIRWICDRRLAAMGMKEIFKVNVNPLPWVDSML-GVTHTNFFENRVVDYAKG 311 Query: 120 A-ELKW 124 A W Sbjct: 312 ALSGSW 317 >gi|194363985|ref|YP_002026595.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia R551-3] gi|194346789|gb|ACF49912.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia R551-3] Length = 339 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 41/126 (32%), Positives = 70/126 (55%), Gaps = 4/126 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES H++F + ++ I+ E P L+ + +Q ML EA E+ +A + + G G++ Sbjct: 213 RDESAHMDFAFECVDVIREEEPDLFDDKMKQDVYDMLAEAIECEVQFAEDVLSGGVAGIS 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119 QY+Q A+ H++G+E + NP +M E+ D+++ NFFE R + YQ G Sbjct: 273 TRDMRQYLQHCADNHFHRLGMERKYN-VRNPLSFM-ELQDVQELTNFFERRASAYQVGVQ 330 Query: 120 AELKWD 125 E+ +D Sbjct: 331 GEVAFD 336 >gi|303258316|ref|ZP_07344319.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderiales bacterium 1_1_47] gi|302858762|gb|EFL81850.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderiales bacterium 1_1_47] Length = 328 Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 5/126 (3%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV---G 59 DE+LH I + + IENP LWT +++ + + LE A+ + Sbjct: 194 DETLHTESMIRLFREYIIENPELWTDSLKKRIYDIAEKMIELEDAFIDLAFGVNDMSKQN 253 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L+ + Y+++I +RR +G++ +FK NP PW+ ++ NFFE RV +Y +G Sbjct: 254 LSPADVKAYIRWICDRRLAAMGMKEIFKVNVNPLPWVDSML-GVTHTNFFENRVVDYAKG 312 Query: 120 A-ELKW 124 A W Sbjct: 313 ALSGSW 318 >gi|163801385|ref|ZP_02195284.1| ribonucleoside-diphosphate reductase 1, beta subunit [Vibrio sp. AND4] gi|159174874|gb|EDP59674.1| ribonucleoside-diphosphate reductase 1, beta subunit [Vibrio sp. AND4] Length = 310 Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 10/126 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + K QQ+ + EA +E + E +P +G+N Sbjct: 190 RDEGLHFSFSALLFKTLGQG------KVTQQEFEEICREAVSIEKEFVTEALPVDLIGMN 243 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119 A QY++ A+ G P F +ENPF +M ++D++ + NFFE RVTEY++ Sbjct: 244 AELMCQYIEHTADVIADLFGFNPAF-GSENPFDYM-RLLDMEGKTNFFEKRVTEYKRPQD 301 Query: 120 AELKWD 125 +L +D Sbjct: 302 RQLSFD 307 >gi|50288235|ref|XP_446546.1| hypothetical protein [Candida glabrata CBS 138] gi|49525854|emb|CAG59473.1| unnamed protein product [Candida glabrata] Length = 335 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RD + +F + HL TK + ++ EA +E A+ +MP +G++ Sbjct: 202 RDRGFYADFACLLF-------AHLKTKPNPKIIEQIITEAVEIEKAHYRNSMPIEKLGMD 254 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +QY++ +A++ G E + T NPFP+M E + + NFFE +V++YQ+ + Sbjct: 255 LKEIDQYIESVADKLLVSFGNEKFYNAT-NPFPFMEEATSI-GKTNFFEKKVSDYQKASA 312 Query: 122 LK 123 Sbjct: 313 TS 314 >gi|167461830|ref|ZP_02326919.1| ribonucleoside-diphosphate reductase beta subunit [Paenibacillus larvae subsp. larvae BRL-230010] gi|322383591|ref|ZP_08057349.1| ribonucleotide-diphosphate reductase subunit beta-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152059|gb|EFX44995.1| ribonucleotide-diphosphate reductase subunit beta-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 343 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 4/123 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ H F +V + + P L T E Q + +A LE +AH + G++ Sbjct: 215 RDEAQHAYFFGEVFKLLLTDFPELNTSERIQYVYDTIDQAVKLEEKWAHYVL-NQIDGID 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID---LKKEKNFFETRVTEYQQ 118 +Y++FIAN+R +GL+P ++ +N PW+ D + + +FFE + Y + Sbjct: 274 LDDFSRYIRFIANKRLKTMGLQPAYEGVDNCMPWIRPFSDEALNQTKTDFFEAKSRTYAK 333 Query: 119 GAE 121 ++ Sbjct: 334 VSD 336 >gi|332971065|gb|EGK10035.1| ribonucleotide-diphosphate reductase beta subunit [Desmospora sp. 8437] Length = 342 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 2/122 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH+ + + ++ E P L T+E + A LEI + + F G+ Sbjct: 214 RDEQLHVRLFVQIYRELLEEIPELNTEENRNFVTESFRRAAELEIRWGETVLGDRFDGIR 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119 Y++F+AN+R H++G E F Y +NP W+ D+ +++FFE + +Y + Sbjct: 274 PDELRAYIRFMANKRAHELGAERPFAGYRKNPMRWVIAYQDVNRGKQDFFEGKSRQYSKV 333 Query: 120 AE 121 + Sbjct: 334 SS 335 >gi|254796877|ref|YP_003081714.1| ribonucleoside-diphosphate reductase, beta subunit [Neorickettsia risticii str. Illinois] gi|254590113|gb|ACT69475.1| ribonucleoside-diphosphate reductase, beta subunit [Neorickettsia risticii str. Illinois] Length = 286 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 3/127 (2%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH N + +EN K + + R + E A+ G G Sbjct: 153 VRDETLHSNSITKLFRTFLLENDIDKLK-LEAEIREICDAMVHHEDAFIDLAFEMGDVEG 211 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A ++Y+++IAN R Q+G +++ NP W+ V++ + NFFE + TEY + Sbjct: 212 LKASEVKEYIRYIANLRLKQLGFSEIYEQKVNPLLWLEAVLNTVEHTNFFENKATEYSKA 271 Query: 120 AE-LKWD 125 A WD Sbjct: 272 ATKGTWD 278 >gi|322510501|gb|ADX05815.1| putative ribonucleotide reductase small subunit [Organic Lake phycodnavirus 1] Length = 324 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 37/116 (31%), Positives = 71/116 (61%), Gaps = 9/116 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+LH F + + ++++ + +E + EA ++E + E++P +G+N Sbjct: 201 RDEALHTEFAVHLFHKLEKKINKKKIREIIE-------EAVVIEKEFIVESLPCRLIGMN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + QY++++A+R Q+G E +++ T NPF +M E+I L+++ NFFE+RV+EY Sbjct: 254 SDLMTQYIEYVADRLMIQLGCEEIYR-TNNPFDFM-ELISLEQKTNFFESRVSEYS 307 >gi|295401051|ref|ZP_06811025.1| Ribonucleoside-diphosphate reductase [Geobacillus thermoglucosidasius C56-YS93] gi|312112173|ref|YP_003990489.1| ribonucleotide reductase [Geobacillus sp. Y4.1MC1] gi|294976844|gb|EFG52448.1| Ribonucleoside-diphosphate reductase [Geobacillus thermoglucosidasius C56-YS93] gi|311217274|gb|ADP75878.1| ribonucleotide reductase [Geobacillus sp. Y4.1MC1] Length = 346 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 2/119 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H++ + ++ E P T E + + +A LEI +A+ + G++ Sbjct: 218 RDEHIHVDLFAKIFKEVLSEYPEYNTPELAEFVQATFTKAAELEIEWANYIIGNDIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQ 118 Y++F AN R HQ+G E F Y NP W+ ++ + +FFE + +Y + Sbjct: 278 MHDLSAYIKFYANVRAHQLGFERPFAGYRTNPLRWIKAYEEVDLGKSDFFEQKSRQYTK 336 >gi|253574542|ref|ZP_04851883.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus sp. oral taxon 786 str. D14] gi|251846247|gb|EES74254.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus sp. oral taxon 786 str. D14] Length = 343 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 5/124 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ H F +V Q+ I+ P L TKE + + A LE +AH T+ K G++ Sbjct: 214 RDENQHCYFFAEVFKQLLIDYPELNTKENIDYAYRTIDRAVELETNWAHYTL-KNVPGID 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LK-KEKNFFETRVTEYQ 117 Y+++IAN+R +GLE + + N PW+ D L + +FFE + Y Sbjct: 273 LNELSDYIKYIANKRLTLMGLEKAYAGVDINCMPWIKPFSDEALNATKTDFFEAKSRNYG 332 Query: 118 QGAE 121 + + Sbjct: 333 KVGD 336 >gi|329922162|ref|ZP_08277907.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus sp. HGF5] gi|328942352|gb|EGG38619.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus sp. HGF5] Length = 370 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 5/124 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ H F +V Q+ + P L TKE + A LE +AH T+ G++ Sbjct: 241 RDENQHCYFFAEVFKQLLKDFPELNTKENIDYLYRTIDRAVELETNWAHYTLSN-VRGID 299 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LK-KEKNFFETRVTEYQ 117 Y+++IANRR +GLE ++ + N PW+ D L + +FFE + Y Sbjct: 300 LNELSDYIKYIANRRITMMGLEKAYEGVDVNCMPWIKPFSDEALNATKTDFFEAKSRNYG 359 Query: 118 QGAE 121 + + Sbjct: 360 KVGD 363 >gi|319655055|ref|ZP_08009124.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp. 2_A_57_CT2] gi|317393250|gb|EFV74019.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp. 2_A_57_CT2] Length = 345 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 2/119 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H++ + + +I ENP L T E + + A LEI +A + + G+ Sbjct: 217 RDEQIHVDLFVKIFKEILQENPELNTNELSKFVQETFKRAAELEIEWARDVIGSKTEGIL 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLK-KEKNFFETRVTEYQQ 118 E Y++F AN RC+Q+G E F+ Y NP W+ + + +FFE + +Y + Sbjct: 277 LSDVEAYIKFYANIRCNQLGYERPFEGYRTNPLRWIVAYEQVDHGKSDFFEQKSRQYTK 335 >gi|257467364|ref|ZP_05631675.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium gonidiaformans ATCC 25563] gi|315918494|ref|ZP_07914734.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium gonidiaformans ATCC 25563] gi|313692369|gb|EFS29204.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium gonidiaformans ATCC 25563] Length = 344 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 9/130 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I +IK ENP+ + +E + R M A EI + + +G+ Sbjct: 216 RDELSHVVLFQKIIREIKAENPNFFQEE---EIRMMFQTAVEQEILWTEHIIGNRVLGIT 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK----EKNFFETRVTEY 116 + E Y +++AN R IGL P++ T+NP+ + D + + NFFE VT Y Sbjct: 273 TETTEAYTKWLANERLRTIGLAPMYDGFTKNPYKHLERFADTEGDGNVKSNFFEGTVTSY 332 Query: 117 QQGAELK-WD 125 + + WD Sbjct: 333 NMSSSIDGWD 342 >gi|257453171|ref|ZP_05618470.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp. 3_1_5R] gi|317059706|ref|ZP_07924191.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium sp. 3_1_5R] gi|313685382|gb|EFS22217.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium sp. 3_1_5R] Length = 344 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 9/130 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I +IK ENP+ + +E + R M A EI + + +G+ Sbjct: 216 RDELSHVVLFQKIIREIKAENPNFFQEE---EIRMMFQTAVEQEILWTEHIIGNRVLGIT 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK----EKNFFETRVTEY 116 + E Y +++AN R IGL P++ T+NP+ + D + + NFFE VT Y Sbjct: 273 TETTEAYTKWLANERLRTIGLAPMYDGFTKNPYKHLERFADTEGDGNVKSNFFEGTVTSY 332 Query: 117 QQGAELK-WD 125 + + WD Sbjct: 333 NMSSSIDGWD 342 >gi|239826135|ref|YP_002948759.1| ribonucleoside-diphosphate reductase [Geobacillus sp. WCH70] gi|239806428|gb|ACS23493.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. WCH70] Length = 346 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 2/119 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H++ + ++ E P T E Q R +A LEI +A+ + G++ Sbjct: 218 RDEHIHVDLFAKIFKEVLNEYPEYNTPELAQFVRETFIKAAKLEIEWANYIIGNDIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQ 118 Y++F AN R HQ+G + F Y NP W+ ++ + +FFE + +Y + Sbjct: 278 MHDLSAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGKSDFFEQKSRQYTK 336 >gi|261404531|ref|YP_003240772.1| Ribonucleoside-diphosphate reductase [Paenibacillus sp. Y412MC10] gi|261280994|gb|ACX62965.1| Ribonucleoside-diphosphate reductase [Paenibacillus sp. Y412MC10] Length = 343 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 5/124 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ H F +V Q+ + P L TKE + A LE +AH T+ G++ Sbjct: 214 RDENQHCYFFAEVFKQLLKDFPELNTKENIDYLYRTIDRAVELETNWAHYTLSN-VRGID 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LK-KEKNFFETRVTEYQ 117 Y+++IANRR +GLE ++ + N PW+ D L + +FFE + Y Sbjct: 273 LNELSDYIKYIANRRITMMGLEKAYEGVDVNCMPWIKPFSDEALNATKTDFFEAKSRNYG 332 Query: 118 QGAE 121 + + Sbjct: 333 KVGD 336 >gi|88608725|ref|YP_506404.1| ribonucleotide-diphosphate reductase subunit beta [Neorickettsia sennetsu str. Miyayama] gi|88600894|gb|ABD46362.1| ribonucleoside-diphosphate reductase, beta subunit [Neorickettsia sennetsu str. Miyayama] Length = 322 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 3/127 (2%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDE+LH N + +EN K + + R + + E A+ G G Sbjct: 189 VRDETLHSNSITKLFRTFLLENNIDKFK-LEAEIREICNAMVHHEDAFIDLAFEMGDVEG 247 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L A ++Y+++IAN R Q+G +++ NP W+ V++ + NFFE + TEY + Sbjct: 248 LKASEVKEYIRYIANLRLKQLGFSEIYEQKVNPLLWLEAVLNTVEHTNFFENKATEYSKA 307 Query: 120 AE-LKWD 125 A WD Sbjct: 308 ATKGTWD 314 >gi|118500933|gb|ABK97635.1| ribonucleoside diphosphate reductase beta subunit [Allochromatium vinosum DSM 180] Length = 280 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 54/81 (66%), Positives = 65/81 (80%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H+NFGIDVINQIKIENPHLWT +F+Q+ M+ EA LE YAH+TMP+G +GL Sbjct: 200 LRDESMHMNFGIDVINQIKIENPHLWTPDFRQELVGMIREAVELEARYAHDTMPRGVLGL 259 Query: 61 NAPSCEQYMQFIANRRCHQIG 81 NA E Y+ FIANRRC QIG Sbjct: 260 NAQMFEDYLHFIANRRCAQIG 280 >gi|308067265|ref|YP_003868870.1| ribonucleoside-diphosphate reductase beta subunit (ribonucleotide reductase small subunit) [Paenibacillus polymyxa E681] gi|305856544|gb|ADM68332.1| Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide reductase small subunit) [Paenibacillus polymyxa E681] Length = 343 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 5/124 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ H F +V Q+ + P L TKE M++ A LE +AH T+ K G++ Sbjct: 214 RDENQHCYFFAEVFKQLLSDFPELNTKENTDYVYRMINRAVELETNWAHYTL-KEVRGID 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LK-KEKNFFETRVTEYQ 117 Y++++AN R +G++ ++ + N PW+ D L + +FFE + Y Sbjct: 273 LNELSDYIKYMANMRLRLLGMDKAYEGVDVNCMPWIKPFSDEALNATKTDFFEAKSRNYG 332 Query: 118 QGAE 121 + + Sbjct: 333 KVGD 336 >gi|310639978|ref|YP_003944736.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus polymyxa SC2] gi|309244928|gb|ADO54495.1| Ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus polymyxa SC2] Length = 343 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 5/124 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ H F +V Q+ + P L TKE M++ A LE +AH T+ K G++ Sbjct: 214 RDENQHCYFFAEVFKQLLADFPELNTKENMDYVYRMINRAVELETNWAHYTL-KEVRGID 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LK-KEKNFFETRVTEYQ 117 Y++++AN R +G++ ++ + N PW+ D L + +FFE + Y Sbjct: 273 LNELSDYIKYMANMRLRLLGMDKAYEGVDINSMPWIKPFSDEALNATKTDFFEAKSRNYG 332 Query: 118 QGAE 121 + + Sbjct: 333 KVGD 336 >gi|237738278|ref|ZP_04568759.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium mortiferum ATCC 9817] gi|229420158|gb|EEO35205.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium mortiferum ATCC 9817] Length = 348 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 9/130 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I +++ ENP+ + + M +A EI++ + + +G+ Sbjct: 220 RDELSHVVIFQQMIKEVQNENPNFFDENI---IYEMFEKAVEQEISWTNHIIGGNILGIT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK----EKNFFETRVTEY 116 + E Y +++AN R IGL+PL++ Y +NP+ + D + + NFFE VT Y Sbjct: 277 EKTTESYTKWLANERLKSIGLQPLYEGYEKNPYKHLERFADTEGEGNVKANFFEGTVTSY 336 Query: 117 QQGAELK-WD 125 + ++ WD Sbjct: 337 NMSSSVEGWD 346 >gi|282598964|ref|YP_003358881.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Deftia phage phiW-14] gi|257219034|gb|ACV50049.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta [Deftia phage phiW-14] Length = 346 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 3/125 (2%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE +H+ + ++ E+P L T E +++ + E + K + + Sbjct: 205 LRDEGIHVEGSSLLYRKVMGEHPWLMTDEHKKQVYDLARAVVAAEDLFLDLAFKKYQLTM 264 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK---NFFETRVTEYQ 117 + Y++++ NRR Q+G + +F+ P PW+ E++ K NFFETRV YQ Sbjct: 265 TKDESKAYVRYMMNRRLLQLGHKAIFEVQGIPCPWIEEILGGAGGKRDSNFFETRVDNYQ 324 Query: 118 QGAEL 122 L Sbjct: 325 ASGAL 329 >gi|23100542|ref|NP_694009.1| ribonucleotide-diphosphate reductase subunit beta [Oceanobacillus iheyensis HTE831] gi|22778775|dbj|BAC15043.1| ribonucleoside-diphosphate reductase beta subunit [Oceanobacillus iheyensis HTE831] Length = 347 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++ ENP EF ++ LEI ++H + G++ Sbjct: 219 RDELEHGRFITELFRATLEENPSHNNAEFIDWIYDRFQQSVELEIEWSHYVL-NKLEGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDL--KKEKNFFETRVTEYQQ 118 + Y+++ AN+ +GLE L+ + ENP W+ +D + +FFE + +Y + Sbjct: 278 MDDMDGYIKYRANKMLRMMGLEELYPQHVENPMKWVRAYVDNFDGTKTDFFEQKSRQYTK 337 Query: 119 GAELK 123 ++L Sbjct: 338 TSDLN 342 >gi|56419447|ref|YP_146765.1| ribonucleoside-diphosphate reductase subunit beta [Geobacillus kaustophilus HTA426] gi|56379289|dbj|BAD75197.1| ribonucleoside-diphosphate reductase beta subunit [Geobacillus kaustophilus HTA426] Length = 346 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H++ + ++ E P T E R +A LEI +A E + G++ Sbjct: 218 RDEHIHVDLFAKIFKEVLNEYPEYRTPELADFVRNTFMKAAELEIEWAREIIGNDIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQ 118 E Y++F AN R HQ+G + F Y NP W+ ++ + +FFE + +Y + Sbjct: 278 LADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGKSDFFEQKPRQYTK 336 >gi|261419130|ref|YP_003252812.1| ribonucleoside-diphosphate reductase [Geobacillus sp. Y412MC61] gi|319765947|ref|YP_004131448.1| ribonucleotide reductase [Geobacillus sp. Y412MC52] gi|261375587|gb|ACX78330.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. Y412MC61] gi|317110813|gb|ADU93305.1| ribonucleotide reductase [Geobacillus sp. Y412MC52] Length = 346 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H++ + ++ E P T E R +A LEI +A E + G++ Sbjct: 218 RDEHIHVDLFAKIFKEVLNEYPEYRTPELSDFVRETFTKAAELEIEWAGEIIGNDIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQ 118 E Y++F AN R HQ+G + F Y NP W+ ++ + +FFE + +Y + Sbjct: 278 LADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGKSDFFEQKPRQYTK 336 >gi|297530897|ref|YP_003672172.1| ribonucleotide reductase [Geobacillus sp. C56-T3] gi|297254149|gb|ADI27595.1| ribonucleotide reductase [Geobacillus sp. C56-T3] Length = 346 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H++ + ++ E P T E R +A LEI +A E + G++ Sbjct: 218 RDEHIHVDLFAKIFKEVLNEYPEYRTPELSDFVRETFTKAAELEIEWAGEIIGNDIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQ 118 E Y++F AN R HQ+G + F Y NP W+ ++ + +FFE + +Y + Sbjct: 278 LADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGKSDFFEQKPRQYTK 336 >gi|167462363|ref|ZP_02327452.1| ribonucleoside-diphosphate reductase beta subunit [Paenibacillus larvae subsp. larvae BRL-230010] Length = 343 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 68/122 (55%), Gaps = 2/122 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H+ + ++ ENP L +E + R +A LEIA++ + F G+ Sbjct: 215 RDEEIHVRLFTQIFRELIAENPELDNEETHEFVRQTFRKAAELEIAWSEYIIGDRFDGVT 274 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEV-IDLKKEKNFFETRVTEYQQG 119 + ++Y++F+AN+R +++G+E F+ + N W+ + + +FFE+RVT+Y + Sbjct: 275 SRDLDKYVRFMANKRVNELGIERPFEGHRRNNLRWIKAYEENDAGKTDFFESRVTQYVKV 334 Query: 120 AE 121 ++ Sbjct: 335 SD 336 >gi|157325080|ref|YP_001468505.1| gp125 [Listeria phage A511] gi|66732769|gb|AAY53360.1| gp57 [Listeria phage P100] gi|66733088|gb|AAY52906.1| gp125 [Listeria phage A511] Length = 343 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I ENP L T E A LE A++ E + G G++ Sbjct: 215 RDELAHSKFISELIRAIVGENPELQTDELNDYVYASFRHAVELEQAWSSEVLQ-GIEGID 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 Y+++ AN+ +GL+P++ +TEN W+ D + + +FFE R + Y++ Sbjct: 274 VEEMLDYVKYRANKMLGMLGLQPMYQGHTENSMTWIKAYADNFTETKTDFFEMRNSSYKK 333 >gi|83592781|ref|YP_426533.1| ribonucleotide-diphosphate reductase subunit beta [Rhodospirillum rubrum ATCC 11170] gi|83575695|gb|ABC22246.1| Ribonucleoside-diphosphate reductase [Rhodospirillum rubrum ATCC 11170] Length = 358 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 14/138 (10%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDESLH I + ++ E L TK + + LE + G G Sbjct: 206 VRDESLHCQGIIRLFHEWNRETGAL-TKPVRDDILDVATTMVGLEEKFVDLAFELGAIEG 264 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKY-----------TENPFPWMSEVIDLKKEKNF 108 + A + Y++++A+ R Q+ L L+ + +P PW+ E+++ + NF Sbjct: 265 MRAEDIKSYVRYVADWRLTQLKLPILYGHFRETEAGYEQLRPHPLPWLVEILNGVEHANF 324 Query: 109 FETRVTEYQQGA-ELKWD 125 FE R TEY + A + WD Sbjct: 325 FEQRSTEYSKAATQGAWD 342 >gi|109287926|ref|YP_654620.1| hypothetical protein MIV048L [Invertebrate iridescent virus 3] gi|123878658|sp|Q197B2|RIR2_IIV3 RecName: Full=Probable ribonucleoside-diphosphate reductase small subunit 048L; AltName: Full=Ribonucleotide reductase small subunit gi|106073549|gb|ABF82078.1| hypothetical protein MIV048L [Aedes taeniorhynchus iridescent virus] Length = 376 Score = 120 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 2/120 (1%) Query: 3 DESLHLNFGIDVINQIKIENP-HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60 DE+ H N +++ + + +EN H+ + + R + LE + G L Sbjct: 250 DETHHTNSMMELFSTLVVENKSHIRLGVLEARVRDTARKIVQLEDGFIDLAFSMGEMRQL 309 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 A + Y+++I NRR +G PL+ ENP PW+ ++++ NFFE + TEY + + Sbjct: 310 TADDVKSYIRYITNRRLQTMGYLPLYSVVENPLPWVEDLLNAPSHTNFFENKPTEYAKAS 369 >gi|294501621|ref|YP_003565321.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus megaterium QM B1551] gi|295706969|ref|YP_003600044.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus megaterium DSM 319] gi|294351558|gb|ADE71887.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus megaterium QM B1551] gi|294804628|gb|ADF41694.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus megaterium DSM 319] Length = 347 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 4/124 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH+ + ++ ENP T+E + EA LEI +A + + F G+ Sbjct: 217 RDEQLHVGLFEKIFKEVLNENPAYRTEELETFVVETFQEAARLEIEWAESVIGEKFDGIT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEP-LFKYT--ENPFPWMSEVIDLK-KEKNFFETRVTEYQ 117 +QY++++AN+RC+Q+G F ENP W+ ++ + +FFE + +Y Sbjct: 277 MKELQQYIEYMANKRCNQLGFGRAAFPEAPIENPLRWIIAYQEVDLGKTDFFEQKSRQYT 336 Query: 118 QGAE 121 + ++ Sbjct: 337 KASD 340 >gi|237678830|emb|CAQ57557.1| NrdB protein [Bradyrhizobium elkanii] Length = 360 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 14/138 (10%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDESLH I + ++ E T+ + + LE + G G Sbjct: 212 VRDESLHCEGIIKLFHEWNRETG-AVTRSVRDDIVDVAKTMVKLEENFVDLAFGLGKIEG 270 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----------NPFPWMSEVIDLKKEKNF 108 + Y++++A+ R Q+ + P+F + E +P PW+ E+++ + NF Sbjct: 271 MRPEQIHTYVRYVADWRLTQLRIAPVFGFFEAKEGGFTQLKAHPLPWLVEILNGVEHANF 330 Query: 109 FETRVTEYQQGAE-LKWD 125 FE R TEY + A WD Sbjct: 331 FEQRATEYSKAASRGSWD 348 >gi|229542075|ref|ZP_04431135.1| Ribonucleoside-diphosphate reductase [Bacillus coagulans 36D1] gi|229326495|gb|EEN92170.1| Ribonucleoside-diphosphate reductase [Bacillus coagulans 36D1] Length = 347 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 4/125 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I + E+P L T F E+ LE ++ + G++ Sbjct: 219 RDELEHGRFISELIRAVLSEHPELNTPAFSDWVYARFRESVDLETEWSEYVLQD-VEGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDL--KKEKNFFETRVTEYQQ 118 ++++ AN+ IGL L+ ++ ENP W+ D + +FFE + Y + Sbjct: 278 LEEMAGFIKYRANKMLRMIGLSELYPEHVENPMKWIRAYADNFDATKTDFFEQKSRSYTK 337 Query: 119 GAELK 123 ++L Sbjct: 338 VSDLN 342 >gi|315304277|ref|ZP_07874626.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria ivanovii FSL F6-596] gi|313627356|gb|EFR96140.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria ivanovii FSL F6-596] Length = 349 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T E + + A LE ++ E M G G++ Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTDELVEYTHEAFRHAVELETEWSEEVMQ-GIEGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 Y+++ AN+ +G+ L+ ++EN W+ D + + +FFE R + Y++ Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSENTMTWIKAYADNFTETKTDFFEMRNSSYKK 339 >gi|313622843|gb|EFR93161.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria innocua FSL J1-023] Length = 349 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T+E + + A LE ++ E + G G++ Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHDAFRHAVELETEWSEEVLQ-GIEGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++ Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339 >gi|310830452|ref|YP_003965553.1| Ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus polymyxa SC2] gi|309249919|gb|ADO59485.1| Ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus polymyxa SC2] Length = 342 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 5/128 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ H F ++ Q+ I+ P L T++ + + EA E +A + G G++ Sbjct: 214 RDENQHCYFFAELYKQLLIDFPQLNTEQNKTFVYNFMDEAVRHETEWAEYVL-DGIEGID 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID---LKKEKNFFETRVTEYQQ 118 Y++ IAN R +GL ++ N PW+ D + FE + Y + Sbjct: 273 LDEFRGYIRHIANNRLRLMGLPAAYEGVSNTMPWIRPFSDEALNDTLTDQFEAKPRTYTK 332 Query: 119 GAE-LKWD 125 ++ WD Sbjct: 333 ASQDNDWD 340 >gi|16801322|ref|NP_471590.1| ribonucleotide-diphosphate reductase subunit beta [Listeria innocua Clip11262] gi|16414770|emb|CAC97486.1| lin2258 [Listeria innocua Clip11262] Length = 349 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T+E + + A LE ++ E + G G++ Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHDAFRHAVELETEWSEEVLQ-GIEGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++ Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339 >gi|291461082|ref|ZP_06026838.2| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium periodonticum ATCC 33693] gi|291379059|gb|EFE86577.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium periodonticum ATCC 33693] Length = 348 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 8/127 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +IK + P ++ E +M A EI + + +G+ Sbjct: 220 RDELSHVVLFRSIVKEIKNDYPEFFSAET---IYSMFKTAVEQEINWTEHIIGNRVLGIT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116 + + E Y +++AN R +GLEPL+ + +NP+ + D + + NFFE VT Y Sbjct: 277 SQTTEAYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 336 Query: 117 QQGAELK 123 + + Sbjct: 337 NMSSSID 343 >gi|270000178|gb|ACZ57936.1| m015L [Myxoma virus] Length = 103 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 55/92 (59%), Gaps = 2/92 (2%) Query: 31 QQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90 +++ +++ EA ++E + E +P +G+N QY++F+A+R ++G +F Sbjct: 1 EERVASIIKEAVVIEQRFLTEALPVRLIGMNCELMCQYIEFVADRLIAELGYSKIF-SAT 59 Query: 91 NPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122 NPF +M E I L+ + NFFE RV++YQ+ + Sbjct: 60 NPFDFM-ENISLEGKTNFFEKRVSDYQRMGVV 90 >gi|317130866|ref|YP_004097148.1| ribonucleotide reductase [Bacillus cellulosilyticus DSM 2522] gi|315475814|gb|ADU32417.1| ribonucleotide reductase [Bacillus cellulosilyticus DSM 2522] Length = 345 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 63/122 (51%), Gaps = 2/122 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ ++ E P L +++ + + + LEI +A + G++ Sbjct: 217 RDEQHHVYLFANIFKELMHEYPELNSEKTHRFVQETFKKGAELEINWAKYIIGDQMEGID 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119 E Y++F+AN+R +++G+E F+ Y NP W+ D+ + +FFE + +Y + Sbjct: 277 IGDLEAYIKFMANKRVNELGVERPFEGYRNNPMRWIKIYEDVNSGKTDFFEQKSRQYTKV 336 Query: 120 AE 121 ++ Sbjct: 337 SD 338 >gi|237738722|ref|ZP_04569203.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium sp. 2_1_31] gi|229423825|gb|EEO38872.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium sp. 2_1_31] Length = 344 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 8/127 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +IK + P ++ E +M A EI + + +G+ Sbjct: 216 RDELSHVVLFRSIVKEIKNDYPEFFSAET---IYSMFKTAVEQEINWTEHIIGNRVLGIT 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116 + + E Y +++AN R +GLEPL+ + +NP+ + D + + NFFE VT Y Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332 Query: 117 QQGAELK 123 + + Sbjct: 333 NMSSSID 339 >gi|46908387|ref|YP_014776.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes serotype 4b str. F2365] gi|47091823|ref|ZP_00229618.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes str. 4b H7858] gi|226224761|ref|YP_002758868.1| ribonucleoside-diphosphate reductase, subunit beta [Listeria monocytogenes Clip81459] gi|254825283|ref|ZP_05230284.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit NrdB [Listeria monocytogenes FSL J1-194] gi|254853280|ref|ZP_05242628.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit NrdB [Listeria monocytogenes FSL R2-503] gi|254931734|ref|ZP_05265093.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit NrdB [Listeria monocytogenes HPB2262] gi|255519998|ref|ZP_05387235.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes FSL J1-175] gi|300764038|ref|ZP_07074034.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes FSL N1-017] gi|46881658|gb|AAT04953.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes serotype 4b str. F2365] gi|47019834|gb|EAL10572.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes str. 4b H7858] gi|225877223|emb|CAS05937.1| Putative ribonucleoside-diphosphate reductase, subunit beta [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258606640|gb|EEW19248.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit NrdB [Listeria monocytogenes FSL R2-503] gi|293583289|gb|EFF95321.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit NrdB [Listeria monocytogenes HPB2262] gi|293594529|gb|EFG02290.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit NrdB [Listeria monocytogenes FSL J1-194] gi|300515379|gb|EFK42430.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes FSL N1-017] gi|313617790|gb|EFR90013.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria innocua FSL S4-378] gi|328465961|gb|EGF37142.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes 1816] gi|328472177|gb|EGF43048.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes 220] gi|332312605|gb|EGJ25700.1| Ribonucleoside-diphosphate reductase [Listeria monocytogenes str. Scott A] Length = 349 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T+E + + A LE ++ E + G G++ Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHDAFRHAVELETEWSEEVLQ-GIEGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++ Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339 >gi|149182583|ref|ZP_01861054.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp. SG-1] gi|148849719|gb|EDL63898.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp. SG-1] Length = 345 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 2/122 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH+ + ++ ENP T E + A LEI + + + GL Sbjct: 217 RDEQLHVGLFEKIYKEVLHENPEYDTAELKVFGTQAFKRAAELEIEWGEQIIGNKIDGLL 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119 E Y++F+AN+R Q+G + F+ Y NP W+ ++ + +FFE + +Y + Sbjct: 277 MSDLEAYIKFMANKRAEQMGFQAPFEGYRTNPLRWIVAYQEVDLGKTDFFEQKSRQYTKT 336 Query: 120 AE 121 ++ Sbjct: 337 SD 338 >gi|17567153|ref|NP_508269.1| hypothetical protein F19G12.2 [Caenorhabditis elegans] gi|10864352|gb|AAG24065.1| Hypothetical protein F19G12.2 [Caenorhabditis elegans] Length = 668 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 32/113 (28%), Positives = 60/113 (53%), Gaps = 8/113 (7%) Query: 6 LHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSC 65 LH N N + K + + +++E+ L+E + E++P +G+N Sbjct: 546 LHPNCFFSTFNLQRRR------KPAESRITEIINESVLVEQDFVRESLPTNLIGMNQHMM 599 Query: 66 EQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +Y++F+A+ ++G + T+NPF +M E I ++ + NFFE RV+EYQ+ Sbjct: 600 CKYVEFVADLLLEELGYSKRYN-TKNPFDFM-ENISIEGKTNFFEKRVSEYQR 650 >gi|27375117|ref|NP_766646.1| ribonucleotide-diphosphate reductase subunit beta [Bradyrhizobium japonicum USDA 110] gi|27348253|dbj|BAC45271.1| ribonucleoside-diphosphate reductase beta subunit [Bradyrhizobium japonicum USDA 110] Length = 360 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 14/138 (10%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59 +RDESLH I + ++ E T+ + + LE + G G Sbjct: 212 VRDESLHCEGIIKLFHEWHRETG-AVTRPVRDDIVDVAKTMVKLEENFVELAFGLGKIEG 270 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----------NPFPWMSEVIDLKKEKNF 108 + Y++++A+ R Q+ + P+F + E +P PW+ E+++ + NF Sbjct: 271 MLPEHIHAYVRYVADWRLAQLRIAPVFGFFEAKEGGFTQLKAHPLPWLVEILNGVEHANF 330 Query: 109 FETRVTEYQQGAE-LKWD 125 FE R TEY + A WD Sbjct: 331 FEQRATEYSKAASRGSWD 348 >gi|328722535|ref|XP_001944897.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like [Acyrthosiphon pisum] Length = 345 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 9/113 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K ++ +A +E + + VG++ Sbjct: 232 RDEGLHTDFACLLFK-------HLDQKPPLTVITHIICKAVTIEQYFLTNALLVKMVGMS 284 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVT 114 +Y++F+A+R +++G +++ + NPFP+M ++ + + N FE RV Sbjct: 285 CEKMAEYIEFVADRLLNELGCPAVYR-SSNPFPFMD-LLSQQGKTNGFEKRVR 335 >gi|294782021|ref|ZP_06747353.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium sp. 1_1_41FAA] gi|294481832|gb|EFG29601.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium sp. 1_1_41FAA] Length = 344 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 8/127 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +IK + P ++ E +M A EI + + +G+ Sbjct: 216 RDELSHVVLFRSIVKEIKNDYPEFFSAET---IYSMFKTAVEQEINWTEHIIGNRVLGIT 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116 + + E Y +++AN R +GLEPL+ + +NP+ + D + + NFFE VT Y Sbjct: 273 SQTTEVYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332 Query: 117 QQGAELK 123 + + Sbjct: 333 NMSSSID 339 >gi|89097912|ref|ZP_01170799.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp. NRRL B-14911] gi|89087414|gb|EAR66528.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp. NRRL B-14911] Length = 353 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 2/124 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH++ + + +I E P TKE + + + EA LEI +A + G+ Sbjct: 224 RDEQLHVDLFVKIFREILDEYPEQNTKELAEFAESTFREAAYLEIEWARSIIGDKISGIL 283 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119 E+Y++F AN R +Q+G F+ + NP W+ ++ + +FFE + +Y + Sbjct: 284 IGDVEEYIRFYANVRSNQLGFNRPFEGSRTNPLRWIKAYEEVDLGKSDFFEQKPRQYVKV 343 Query: 120 AELK 123 + Sbjct: 344 NTVD 347 >gi|16804193|ref|NP_465678.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes EGD-e] gi|116873587|ref|YP_850368.1| ribonucleotide-diphosphate reductase subunit beta [Listeria welshimeri serovar 6b str. SLCC5334] gi|217963685|ref|YP_002349363.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes HCC23] gi|224500181|ref|ZP_03668530.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes Finland 1988] gi|224501047|ref|ZP_03669354.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes FSL R2-561] gi|254826956|ref|ZP_05231643.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit NrdB [Listeria monocytogenes FSL N3-165] gi|254831409|ref|ZP_05236064.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes 10403S] gi|255028522|ref|ZP_05300473.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes LO28] gi|284802601|ref|YP_003414466.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes 08-5578] gi|284995743|ref|YP_003417511.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes 08-5923] gi|290893101|ref|ZP_06556089.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit NrdB [Listeria monocytogenes FSL J2-071] gi|16411624|emb|CAD00232.1| lmo2154 [Listeria monocytogenes EGD-e] gi|116742465|emb|CAK21589.1| ribonucleoside-diphosphate reductase beta chain [Listeria welshimeri serovar 6b str. SLCC5334] gi|217332955|gb|ACK38749.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes HCC23] gi|258599337|gb|EEW12662.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit NrdB [Listeria monocytogenes FSL N3-165] gi|284058163|gb|ADB69104.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes 08-5578] gi|284061210|gb|ADB72149.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes 08-5923] gi|290557263|gb|EFD90789.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit NrdB [Listeria monocytogenes FSL J2-071] gi|307571740|emb|CAR84919.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes L99] Length = 349 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T+E + + A LE ++ E + G G++ Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWSEEVLQ-GIEGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++ Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339 >gi|47095728|ref|ZP_00233334.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes str. 1/2a F6854] gi|254899145|ref|ZP_05259069.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes J0161] gi|254912714|ref|ZP_05262726.1| ribonucleoside-diphosphate reductase [Listeria monocytogenes J2818] gi|254937041|ref|ZP_05268738.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit NrdB [Listeria monocytogenes F6900] gi|47015871|gb|EAL06798.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes str. 1/2a F6854] gi|258609644|gb|EEW22252.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit NrdB [Listeria monocytogenes F6900] gi|293590709|gb|EFF99043.1| ribonucleoside-diphosphate reductase [Listeria monocytogenes J2818] Length = 349 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T+E + + A LE ++ E + G G++ Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWSEEVLQ-GIEGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++ Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339 >gi|138894466|ref|YP_001124919.1| ribonucleoside-diphosphate reductase subunit beta [Geobacillus thermodenitrificans NG80-2] gi|196247935|ref|ZP_03146637.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. G11MC16] gi|134265979|gb|ABO66174.1| Ribonucleoside-diphosphate reductase beta subunit [Geobacillus thermodenitrificans NG80-2] gi|196212719|gb|EDY07476.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. G11MC16] Length = 344 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 2/119 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H++ + ++ E P T E +R+ +A LEI +A E + G++ Sbjct: 216 RDEHIHVDLFAKIFKEVLNEYPEYRTPELADFARSTFMKAAELEIEWAGEIIGNDIDGID 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQ 118 E Y++F AN R HQ+G + F Y NP W+ ++ + +FFE + +Y + Sbjct: 276 LADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGKSDFFEQKPRQYTK 334 >gi|315283233|ref|ZP_07871471.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria marthii FSL S4-120] gi|313613124|gb|EFR87028.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria marthii FSL S4-120] Length = 349 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T E + + A LE ++ E + G G++ Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTDELVEYTHEAFRHAVELETEWSEEVLQ-GIEGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++ Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339 >gi|255023762|ref|ZP_05295748.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes FSL J1-208] Length = 284 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T E + + A LE ++ E + G G++ Sbjct: 156 RDELAHSKFISEVIRAILGENPELQTDELVEYTHDAFRHAVELETEWSEEVLQ-GIEGID 214 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++ Sbjct: 215 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 274 >gi|255018022|ref|ZP_05290148.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes FSL F2-515] Length = 267 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T+E + + A LE ++ E + G G++ Sbjct: 139 RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWSEEVLQ-GIEGID 197 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++ Sbjct: 198 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 257 >gi|256027986|ref|ZP_05441820.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp. D11] Length = 348 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 8/127 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +IK + P+ ++ E +M A EIA+ + +G+ Sbjct: 220 RDELSHVVLFRSIVKEIKNDFPNFFSAET---VYSMFKTAVEQEIAWTEHIIGNRVLGIT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116 + + E Y +++AN R +GLEPLF + +NP+ + D + + NFFE VT Y Sbjct: 277 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 336 Query: 117 QQGAELK 123 + + Sbjct: 337 NMSSSID 343 >gi|254303614|ref|ZP_04970972.1| ribonucleoside-diphosphate reductase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323806|gb|EDK89056.1| ribonucleoside-diphosphate reductase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 344 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 8/127 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +IK + P+ ++ E +M A EIA+ + +G+ Sbjct: 216 RDELSHVVLFRSMVKEIKNDFPNFFSAET---IYSMFKTAVEQEIAWTEHIIGNRVLGIT 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116 + + E Y +++AN R +GLEPLF + +NP+ + D + + NFFE VT Y Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332 Query: 117 QQGAELK 123 + + Sbjct: 333 NMSSSID 339 >gi|84998662|ref|XP_954052.1| ribonucleotide reductase R2 subunit or ribonucleoside-diphosphate reductase small chain [Theileria annulata] gi|65305050|emb|CAI73375.1| ribonucleotide reductase R2 subunit or ribonucleoside-diphosphate reductase small chain, putative [Theileria annulata] Length = 322 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 61/104 (58%), Gaps = 9/104 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +FG + + +K + P + + ++ EA ++E +Y +++P +G+N Sbjct: 224 RDEGLHADFGCFIYHNLKHKLPE-------EAVQQIIKEAVVVERSYICDSLPCDLIGMN 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE 105 + QY++F+A+R +G+ P++ T NPF WM ++I ++ + Sbjct: 277 SQLMTQYIEFVADRLLQSLGVRPVYNVT-NPFDWM-QLISVQVK 318 >gi|87311395|ref|ZP_01093515.1| ribonucleotide-diphosphate reductase beta subunit [Blastopirellula marina DSM 3645] gi|87285807|gb|EAQ77721.1| ribonucleotide-diphosphate reductase beta subunit [Blastopirellula marina DSM 3645] Length = 313 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 41/84 (48%), Positives = 57/84 (67%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++HLNFGID+IN IK ENP LWT EFQ + ++ +A LEI YA + +P G +GL Sbjct: 229 LRDETVHLNFGIDLINGIKAENPDLWTAEFQAEIIDLIKQAVELEIEYAGDCLPNGILGL 288 Query: 61 NAPSCEQYMQFIANRRCHQIGLEP 84 N Y+ ++A+RR +IGL Sbjct: 289 NRDLFRDYVHYVADRRVERIGLPK 312 >gi|289435502|ref|YP_003465374.1| ribonucleoside-diphosphate reductase beta chain [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171746|emb|CBH28292.1| ribonucleoside-diphosphate reductase beta chain [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|313632343|gb|EFR99385.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria seeligeri FSL N1-067] gi|313636848|gb|EFS02469.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria seeligeri FSL S4-171] Length = 349 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T+E + + A LE ++ E + G G++ Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVDLETEWSEEVLQ-GIEGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++ Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339 >gi|315644971|ref|ZP_07898099.1| Ribonucleoside-diphosphate reductase [Paenibacillus vortex V453] gi|315279682|gb|EFU42984.1| Ribonucleoside-diphosphate reductase [Paenibacillus vortex V453] Length = 343 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 5/124 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ H F +V Q+ + P L ++E + A LE +AH T+ G++ Sbjct: 214 RDENQHCYFFAEVFKQLLKDFPELNSQENIDYLYRTIDRAVELETNWAHYTLSN-VRGID 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LK-KEKNFFETRVTEYQ 117 Y+++IANRR +GLE ++ + N PW+ D L + +FFE + Y Sbjct: 273 LNELGDYIKYIANRRITMMGLEKAYQGVDVNCMPWIKPFSDEALNATKTDFFEAKSRNYG 332 Query: 118 QGAE 121 + + Sbjct: 333 KVGD 336 >gi|156564205|ref|YP_001429715.1| nrd beta subunit [Bacillus phage 0305phi8-36] gi|154622902|gb|ABS83782.1| nrd beta subunit [Bacillus phage 0305phi8-36] Length = 352 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 4/122 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +I ++ ENP L T+E Q L EA E +A E + GL+ Sbjct: 224 RDEMQHAYFIGLLIRRLLTENPELNTQENAQYIVDSLKEAVATEKEWAGEIL-ADIEGLD 282 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK---EKNFFETRVTEYQQ 118 + Y++++AN+R Q+G++ +++ NP PW+ D + + FE + +Y Sbjct: 283 LEEFDHYIEYLANKRVRQLGMDNIYEERGNPMPWIQVFSDEMMEHTKTDQFENKSRDYSG 342 Query: 119 GA 120 Sbjct: 343 AT 344 >gi|289765931|ref|ZP_06525309.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium sp. D11] gi|289717486|gb|EFD81498.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium sp. D11] Length = 344 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 8/127 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +IK + P+ ++ E +M A EIA+ + +G+ Sbjct: 216 RDELSHVVLFRSIVKEIKNDFPNFFSAET---VYSMFKTAVEQEIAWTEHIIGNRVLGIT 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116 + + E Y +++AN R +GLEPLF + +NP+ + D + + NFFE VT Y Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332 Query: 117 QQGAELK 123 + + Sbjct: 333 NMSSSID 339 >gi|260497963|ref|ZP_05816079.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium sp. 3_1_33] gi|260196471|gb|EEW94002.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium sp. 3_1_33] Length = 344 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 8/127 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +IK + P+ ++ E +M A EIA+ + +G+ Sbjct: 216 RDELSHVVLFRSIVKEIKNDFPNFFSAET---VYSMFKTAVEQEIAWTEHIIGNRVLGIT 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116 + + E Y +++AN R +GLEPLF + +NP+ + D + + NFFE VT Y Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332 Query: 117 QQGAELK 123 + + Sbjct: 333 NMSSSID 339 >gi|239502693|ref|ZP_04662003.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter baumannii AB900] Length = 309 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 6/126 (4%) Query: 2 RDE-SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 RDE HL+ +++ ++ EN ++T+ F K+ + ++ +EI++ KG Sbjct: 187 RDEEGTHLDLFAHMLDTLRHENKDVFTQSFWNKALEVFLTSSEMEISWGKYIT-KGVT-- 243 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPL-FKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQ 118 N + E Y++ +AN R QI + + +NPFPW+ + EKNFFETRVT+Y+ Sbjct: 244 NPKAIEDYIKHLANLRAEQIQAPFVPYPGVKNPFPWVEQFSKPNTSEKNFFETRVTDYKV 303 Query: 119 GAELKW 124 G L W Sbjct: 304 GGALVW 309 >gi|299822182|ref|ZP_07054068.1| ribonucleotide-diphosphate reductase subunit beta [Listeria grayi DSM 20601] gi|299815711|gb|EFI82949.1| ribonucleotide-diphosphate reductase subunit beta [Listeria grayi DSM 20601] Length = 349 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T E + A LE ++ E M +G G++ Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTDELVAYTHDAFRHAVELETIWSEEVM-EGIEGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 Y+++ AN+ +G+ L+ ++EN W+ D + + +FFE R + Y++ Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSENTMTWIKAYADNFTETKTDFFEMRNSSYKK 339 >gi|237742881|ref|ZP_04573362.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium sp. 4_1_13] gi|229430529|gb|EEO40741.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium sp. 4_1_13] Length = 344 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 8/127 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +IK + P+ ++ E +M A EI + + +G+ Sbjct: 216 RDELSHVVLFRSMVKEIKNDFPNFFSAET---IYSMFKTAVEQEITWTEHIIGNRVLGIT 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116 + + E Y +++AN R +GLEPL+ + +NP+ + D + + NFFE VT Y Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332 Query: 117 QQGAELK 123 + + Sbjct: 333 NMSSSID 339 >gi|218249013|ref|YP_002374384.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8801] gi|218169491|gb|ACK68228.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8801] Length = 344 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 13/132 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I + + PH + M A E + + + +G+ Sbjct: 216 RDELSHVRLYQKLIPEARKVFPH-----SVDQIYDMFDRAVKYECQWTNHIVGNNILGIT 270 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK----EKNFFETRVT 114 S EQY +++AN R IGL+PL+ Y ++P+ + D KK + NFFE VT Sbjct: 271 EASTEQYTKYLANIRLRSIGLDPLYPDIKYNKSPYTHLERFSDTKKEAHTKANFFEATVT 330 Query: 115 EYQQGAELK-WD 125 Y + + WD Sbjct: 331 SYVMSSGITGWD 342 >gi|257062099|ref|YP_003139987.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8802] gi|256592265|gb|ACV03152.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8802] Length = 355 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 13/132 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I + + PH + M A E + + + +G+ Sbjct: 227 RDELSHVRLYQKLIPEARKVFPH-----SVDQIYDMFDRAVKYECQWTNHIVGNNILGIT 281 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK----EKNFFETRVT 114 S EQY +++AN R IGL+PL+ Y ++P+ + D KK + NFFE VT Sbjct: 282 EASTEQYTKYLANIRLRSIGLDPLYPDIKYNKSPYTHLERFSDTKKEAHTKANFFEATVT 341 Query: 115 EYQQGAELK-WD 125 Y + + WD Sbjct: 342 SYVMSSGITGWD 353 >gi|254523600|ref|ZP_05135655.1| ribonucleoside-diphosphate reductase, beta subunit [Stenotrophomonas sp. SKA14] gi|219721191|gb|EED39716.1| ribonucleoside-diphosphate reductase, beta subunit [Stenotrophomonas sp. SKA14] Length = 346 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I ENP L T E A LE ++ E + G G++ Sbjct: 218 RDELAHTKFISELIRAIIGENPELQTNELTAYVHQAFEHAIELETQWSSEVL-DGIDGID 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L+ T+N PW+ D + + +FFE R Y++ Sbjct: 277 VEEMTRYVKYRANKMAGMLGIERLYSDTTDNVMPWIKAYADNFTETKTDFFEMRNASYKK 336 >gi|209972895|ref|YP_002300342.1| gp4 [Bacillus phage SPO1] gi|209871215|gb|ACI90971.1| gp4 [Bacillus phage SPO1] Length = 346 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F V+ + E P L T+E M+ EA LEI Y+ + + GL+ Sbjct: 218 RDEVAHAYFFSQVLRYLMAERPELHTEENVNFIYDMMQEAADLEIEYSQKIL-HDIPGLD 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM---SEVIDLKKEKNFFETRVTEYQQ 118 E Y++ + NRR +GL+ ++ EN PWM + + + + + FE + Y++ Sbjct: 277 LEELEGYIKSLCNRRLRGVGLDDIYAGVENSMPWMIAFDDGSNNQTKSDMFEQKSRNYKK 336 >gi|19703451|ref|NP_603013.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19713529|gb|AAL94312.1| Ribonucleoside-diphosphate reductase beta chain [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 348 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 8/127 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +IK + P+ ++ E +M A EI + + +G+ Sbjct: 220 RDELSHVVLFRSMVKEIKNDFPNFFSAET---IYSMFKTAVEQEITWTEHIIGNRVLGIT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116 + + E Y +++AN R +GLEPLF + +NP+ + D + + NFFE VT Y Sbjct: 277 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 336 Query: 117 QQGAELK 123 + + Sbjct: 337 NMSSSID 343 >gi|256846215|ref|ZP_05551673.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium sp. 3_1_36A2] gi|256719774|gb|EEU33329.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium sp. 3_1_36A2] Length = 344 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 8/127 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +IK + P+ ++ E +M A EI + + +G+ Sbjct: 216 RDELSHVVLFRSMVKEIKNDFPNFFSAET---IYSMFKTAVEQEITWTEHIIGNRVLGIT 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116 + + E Y +++AN R +GLEPLF + +NP+ + D + + NFFE VT Y Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332 Query: 117 QQGAELK 123 + + Sbjct: 333 NMSSSID 339 >gi|296329016|ref|ZP_06871523.1| ribonucleotide-diphosphate reductase beta subunit [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296153909|gb|EFG94720.1| ribonucleotide-diphosphate reductase beta subunit [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 348 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 8/127 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +IK + P+ ++ E +M A EI + + +G+ Sbjct: 220 RDELSHVVLFRSMVKEIKNDFPNFFSAET---IYSMFKTAVEQEITWTEHIIGNRVLGIT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116 + + E Y +++AN R +GLEPLF + +NP+ + D + + NFFE VT Y Sbjct: 277 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 336 Query: 117 QQGAELK 123 + + Sbjct: 337 NMSSSID 343 >gi|294784669|ref|ZP_06749957.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium sp. 3_1_27] gi|294486383|gb|EFG33745.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium sp. 3_1_27] Length = 344 Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats. Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 8/127 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +IK + P+ ++ E +M A EI + + +G+ Sbjct: 216 RDELSHVVLFRSMVKEIKNDFPNFFSAET---IYSMFKTAVEQEITWTEHIIGNRVLGIT 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116 + + E Y +++AN R +GLEPLF + +NP+ + D + + NFFE VT Y Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332 Query: 117 QQGAELK 123 + + Sbjct: 333 NMSSSID 339 >gi|237743586|ref|ZP_04574067.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium sp. 7_1] gi|229432617|gb|EEO42829.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium sp. 7_1] Length = 344 Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats. Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 8/127 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ ++ +IK + P+ ++ E +M A EI + + +G+ Sbjct: 216 RDELSHVVLFRSMVKEIKNDFPNFFSAET---IYSMFKTAVEQEITWTEHIIGNRVLGIT 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116 + + E Y +++AN R +GLEPLF + +NP+ + D + + NFFE VT Y Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332 Query: 117 QQGAELK 123 + + Sbjct: 333 NMSSSID 339 >gi|319785673|ref|YP_004145148.1| ribonucleotide reductase [Pseudoxanthomonas suwonensis 11-1] gi|317464185|gb|ADV25917.1| ribonucleotide reductase [Pseudoxanthomonas suwonensis 11-1] Length = 354 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 4/123 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T E A LE + E + G G++ Sbjct: 226 RDELAHTKFISEVIRAIVGENPELQTDELADYVHLAFRHAIELETQWTGEVL-DGIDGID 284 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L+ + T+N PW+ D + + +FFE R Y++ Sbjct: 285 VDEMIRYVKYRANKMAGMLGIESLYTETTDNVMPWIRAYADNFTETKTDFFEMRNASYKK 344 Query: 119 GAE 121 Sbjct: 345 TNA 347 >gi|325294459|ref|YP_004280973.1| ribonucleotide reductase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064907|gb|ADY72914.1| ribonucleotide reductase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 352 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 7/129 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ + + E + + K M A E ++ + + +G+N Sbjct: 224 RDELTHVILFEHFMKDLTDEEFKKYLP--KDKIYEMFKVAVNQEQRFSKKVIGNKILGMN 281 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK----EKNFFETRVTEYQ 117 S E+Y ++AN+R +GL+P+F T NP+ + + D + NFFE VT Y Sbjct: 282 EKSIEEYTYYVANKRLKALGLDPIFPDTPNPYEHLERIADTGGEGNVKANFFEATVTSYN 341 Query: 118 QGAELK-WD 125 Q + ++ WD Sbjct: 342 QASAVEGWD 350 >gi|207345015|gb|EDZ71971.1| YGR180Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 224 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RD + +F + HL TK + ++ EA +E Y ++P G++ Sbjct: 97 RDRGAYTDFSCLLF-------AHLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMD 149 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S Y++F+A+ G E + NPF +M +V + FFE +V++YQ+ ++ Sbjct: 150 LKSIHTYIEFVADGLLQGFGNEKYYNAV-NPFEFMEDVATA-GKTTFFEKKVSDYQKASD 207 Query: 122 LK 123 + Sbjct: 208 MS 209 >gi|241589542|ref|YP_002979567.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D] gi|240868254|gb|ACS65913.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D] Length = 328 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 45/79 (56%), Positives = 58/79 (73%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL Sbjct: 233 LRDESLHCNFGIDLINQIKLENPHLWTAEFKVEITELFKQAVDLEYRYAEDTMPRGVLGL 292 Query: 61 NAPSCEQYMQFIANRRCHQ 79 NA + Y++FI NRRC Sbjct: 293 NASMFKGYLRFICNRRCRS 311 >gi|67921622|ref|ZP_00515140.1| Ribonucleoside-diphosphate reductase [Crocosphaera watsonii WH 8501] gi|67856734|gb|EAM51975.1| Ribonucleoside-diphosphate reductase [Crocosphaera watsonii WH 8501] Length = 321 Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 13/132 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I + + PH ++ M A E + + + +G+ Sbjct: 193 RDELSHVRLYQKLIPEARKVFPH-----SVEQIYEMFDMAVNYECRWTNHIVGNNILGIT 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK----EKNFFETRVT 114 S E+Y +++AN R IGLEPL+ Y+++P+ + D KK + NFFE VT Sbjct: 248 ESSTEKYTKYLANIRLRSIGLEPLYPEPKYSKSPYTHLERFSDTKKAAHTKANFFEATVT 307 Query: 115 EYQQGAELK-WD 125 Y + L WD Sbjct: 308 SYVMSSGLTGWD 319 >gi|297582631|ref|YP_003698411.1| ribonucleoside-diphosphate reductase [Bacillus selenitireducens MLS10] gi|297141088|gb|ADH97845.1| Ribonucleoside-diphosphate reductase [Bacillus selenitireducens MLS10] Length = 347 Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats. Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 4/123 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F + + ++P L T+E Q + A LE +A + G++ Sbjct: 219 RDEMQHAYFMSQFVRILLTDHPELNTRENVQYVYDAMASAAGLEQEWAAVIL-ADIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL---KKEKNFFETRVTEYQQ 118 Y++++ N+R Q+GL LF +NP PW+ D + + +FFE + Y + Sbjct: 278 LGEFNGYVEYLVNKRLRQLGLSNLFPERDNPMPWIHVFSDTMMNQTKSDFFEQKSRSYTK 337 Query: 119 GAE 121 Sbjct: 338 VTS 340 >gi|269861752|ref|XP_002650564.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220065950|gb|EED43491.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] Length = 106 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 2/86 (2%) Query: 34 SRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF 93 ++ EA +E + E++P +G+N QY++F+A+R +G + ++ + NPF Sbjct: 7 IEDIVREAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPF 65 Query: 94 PWMSEVIDLKKEKNFFETRVTEYQQG 119 +M E I L+ + NFFE R YQ+G Sbjct: 66 DFM-ENISLQGKTNFFERREANYQKG 90 >gi|323337480|gb|EGA78728.1| Rnr4p [Saccharomyces cerevisiae Vin13] Length = 328 Score = 115 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RD + +F + HL TK + ++ EA +E Y ++P G++ Sbjct: 201 RDRGAYTDFSCLLF-------AHLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMD 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S Y++F+A+ G E + NPF +M +V + FFE +V++YQ+ ++ Sbjct: 254 LKSIHTYIEFVADGLLQGFGNEKYYNAV-NPFEFMEDVATA-GKTTFFEKKVSDYQKASD 311 Query: 122 LK 123 + Sbjct: 312 MS 313 >gi|194366071|ref|YP_002028681.1| ribonucleotide-diphosphate reductase subunit beta [Stenotrophomonas maltophilia R551-3] gi|194348875|gb|ACF51998.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia R551-3] Length = 346 Score = 115 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 4/123 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I ENP L T E A LE ++ E + G G++ Sbjct: 218 RDELAHTKFISELIRAIIGENPELQTNELTAYVHQSFEHAIELETQWSSEVL-DGIDGID 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L+ T+N PW+ D + + +FFE R Y++ Sbjct: 277 VDEMVRYVKYRANKMAGMLGIERLYSDTTDNVMPWIKAYADNFTETKTDFFEMRNASYKK 336 Query: 119 GAE 121 Sbjct: 337 TNA 339 >gi|285016983|ref|YP_003374694.1| ribonucleotide-diphosphate reductase beta subunit protein [Xanthomonas albilineans GPE PC73] gi|283472201|emb|CBA14708.1| probable ribonucleotide-diphosphate reductase beta subunit protein [Xanthomonas albilineans] Length = 346 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I EN L T E A LE ++ E + G G++ Sbjct: 218 RDELAHTKFISELIRAIIGENAELQTNELTDYVHQAFEHAIRLETEWSSEVL-DGIEGID 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 QY+++ AN+ +G+E L+ ++N PW+ D + + +FFE R Y++ Sbjct: 277 VDEMIQYVKYRANKMSGMLGIEKLYTGASDNVMPWIKAYADNFTETKTDFFEMRNASYKK 336 >gi|190574752|ref|YP_001972597.1| ribonucleotide-diphosphate reductase subunit beta [Stenotrophomonas maltophilia K279a] gi|190012674|emb|CAQ46302.1| putative ribonucleoside-diphosphate reductase beta chain [Stenotrophomonas maltophilia K279a] Length = 346 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I ENP L T E A LE ++ E + G G++ Sbjct: 218 RDELAHTKFISELIRAIIGENPELQTNELTAYVHQSFEHAIELETQWSSEVL-DGIDGID 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L+ T+N PW+ D + + +FFE R Y++ Sbjct: 277 VDEMVRYVKYRANKMAGMLGIERLYSDTTDNVMPWIKAYADNFTETKTDFFEMRNASYKK 336 >gi|159030376|emb|CAO91271.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 355 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 13/132 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I + PH ++ M A E + + + +G+ Sbjct: 227 RDELSHVRLYQKLIPEAMAIFPH-----SVEQIYEMFDSAVKHECCWTNHIVGNDILGIT 281 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK----EKNFFETRVT 114 S EQY +++AN R IGLEPL+ KY ++P+ + D KK + NFFE VT Sbjct: 282 EYSTEQYTKYLANIRLKAIGLEPLYREEKYNKSPYNHLERFSDTKKEGHTKANFFEATVT 341 Query: 115 EYQQGAELK-WD 125 Y + L WD Sbjct: 342 SYVMSSGLTGWD 353 >gi|284929768|ref|YP_003422290.1| ribonucleotide reductase, subunit beta [cyanobacterium UCYN-A] gi|284810212|gb|ADB95909.1| ribonucleotide reductase, beta subunit [cyanobacterium UCYN-A] Length = 354 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 13/132 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I + + PH ++ M A E + + + +G+ Sbjct: 226 RDELSHVRLYQKLIPEARKVFPH-----STEQIYEMFDTAVNHECRWTNHIVGSNILGIT 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK----EKNFFETRVT 114 S EQY +++AN R IGLEPL+ ++T++P+ + D KK + NFFE+ VT Sbjct: 281 ESSTEQYTKYLANIRLRSIGLEPLYTGEEFTKSPYSHLERFSDTKKDGHTKANFFESTVT 340 Query: 115 EYQQGAELK-WD 125 Y + + WD Sbjct: 341 SYVMSSGVSGWD 352 >gi|313607545|gb|EFR83848.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes FSL F2-208] Length = 187 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T+E + + A LE ++ E + G G++ Sbjct: 59 RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWSEEVLQ-GIEGID 117 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++ Sbjct: 118 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 177 >gi|51830370|gb|AAU09736.1| YGR180C [Saccharomyces cerevisiae] Length = 345 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RD + +F + HL TK + ++ EA +E Y ++P G++ Sbjct: 218 RDRGAYTDFSCLLF-------AHLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMD 270 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S Y++F+A+ G E + NPF +M +V + FFE +V++YQ+ ++ Sbjct: 271 LKSIHTYIEFVADGLLQGFGNEKYYNAV-NPFEFMEDVATA-GKTTFFEKKVSDYQKASD 328 Query: 122 LK 123 + Sbjct: 329 MS 330 >gi|151943458|gb|EDN61769.1| ribonucleotide reductase [Saccharomyces cerevisiae YJM789] gi|190406805|gb|EDV10072.1| ribonucleotide reductase [Saccharomyces cerevisiae RM11-1a] gi|256270921|gb|EEU06048.1| Rnr4p [Saccharomyces cerevisiae JAY291] gi|259146684|emb|CAY79941.1| Rnr4p [Saccharomyces cerevisiae EC1118] gi|323333575|gb|EGA74969.1| Rnr4p [Saccharomyces cerevisiae AWRI796] gi|323348450|gb|EGA82695.1| Rnr4p [Saccharomyces cerevisiae Lalvin QA23] Length = 345 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RD + +F + HL TK + ++ EA +E Y ++P G++ Sbjct: 218 RDRGAYTDFSCLLF-------AHLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMD 270 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S Y++F+A+ G E + NPF +M +V + FFE +V++YQ+ ++ Sbjct: 271 LKSIHTYIEFVADGLLQGFGNEKYYNAV-NPFEFMEDVATA-GKTTFFEKKVSDYQKASD 328 Query: 122 LK 123 + Sbjct: 329 MS 330 >gi|6321619|ref|NP_011696.1| Rnr4p [Saccharomyces cerevisiae S288c] gi|1710402|sp|P49723|RIR4_YEAST RecName: Full=Ribonucleoside-diphosphate reductase small chain 2; AltName: Full=Ribonucleotide reductase R2 subunit 2; AltName: Full=Ribonucleotide reductase small subunit 2 gi|15826570|pdb|1JK0|B Chain B, Ribonucleotide Reductase Y2y4 Heterodimer gi|52695527|pdb|1SMS|A Chain A, Structure Of The Ribonucleotide Reductase Rnr4 Homodimer From Saccharomyces Cerevisiae gi|52695528|pdb|1SMS|B Chain B, Structure Of The Ribonucleotide Reductase Rnr4 Homodimer From Saccharomyces Cerevisiae gi|915546|gb|AAB72236.1| Rnr4p [Saccharomyces cerevisiae] gi|1323319|emb|CAA97206.1| RNR4 [Saccharomyces cerevisiae] gi|285812375|tpg|DAA08275.1| TPA: Rnr4p [Saccharomyces cerevisiae S288c] gi|323304781|gb|EGA58540.1| Rnr4p [Saccharomyces cerevisiae FostersB] gi|323308943|gb|EGA62174.1| Rnr4p [Saccharomyces cerevisiae FostersO] Length = 345 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 9/122 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RD + +F + HL TK + ++ EA +E Y ++P G++ Sbjct: 218 RDRGAYTDFSCLLF-------AHLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMD 270 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S Y++F+A+ G E + NPF +M +V + FFE +V++YQ+ ++ Sbjct: 271 LKSIHTYIEFVADGLLQGFGNEKYYNAV-NPFEFMEDVATA-GKTTFFEKKVSDYQKASD 328 Query: 122 LK 123 + Sbjct: 329 MS 330 >gi|115691069|ref|XP_001203692.1| PREDICTED: similar to ribonuleotide reductase small subunit, partial [Strongylocentrotus purpuratus] gi|115735426|ref|XP_798682.2| PREDICTED: similar to ribonuleotide reductase small subunit, partial [Strongylocentrotus purpuratus] Length = 258 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 31/122 (25%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + HL + + ++ +A LE Y E +P +G+N Sbjct: 165 RDEGLHCDFACLLFS-------HLNHPTPVSRIQEIIRDAVRLEEEYLSEALPVALIGMN 217 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A QY+QF+A+R ++ + NFFE RV EYQ+ Sbjct: 218 ARLMCQYIQFVADRLLMEL------------------------KSNFFEKRVGEYQKMNV 253 Query: 122 LK 123 + Sbjct: 254 MT 255 >gi|126654703|ref|ZP_01726237.1| hypothetical protein CY0110_09717 [Cyanothece sp. CCY0110] gi|126623438|gb|EAZ94142.1| hypothetical protein CY0110_09717 [Cyanothece sp. CCY0110] Length = 352 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 13/132 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I + + PH ++ M A E + + + +G+ Sbjct: 224 RDELSHVRLYQKLIPEARKVFPH-----SVEQIYEMFDMAVNYECRWTNHIVGNNILGIT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK----EKNFFETRVT 114 S E+Y +++AN R IGLEPL+ Y ++P+ + D KK + NFFE VT Sbjct: 279 ESSTEKYTKYLANIRLRSIGLEPLYPEPKYNKSPYTHLERFSDTKKEAHTKANFFEATVT 338 Query: 115 EYQQGAELK-WD 125 Y + + WD Sbjct: 339 SYVMSSGVTGWD 350 >gi|56692684|ref|YP_164142.1| ribonucleoside-diphosphate reductase beta subunit [Singapore grouper iridovirus] gi|42517396|gb|AAS18062.1| ribonucleoside-diphosphate reductase beta subunit [Singapore grouper iridovirus] Length = 384 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 5/129 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP--KGFV 58 +RDE++H+ + + E P L T++ + + A LE A+ Sbjct: 253 VRDENIHVEGVSRLFETLCAEYPWLMTEKLVRDCKKDAERAAELEFAFIDLAFSYCPALD 312 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEKNFFETRVTEY 116 GL S + Y+ ++ N R +GL L ENP PW+ +I+ NFFE VTEY Sbjct: 313 GLTPSSVKNYVLYVINLRASHMGLPKLMASAPSENPLPWVKWLIEGADLTNFFENHVTEY 372 Query: 117 QQGA-ELKW 124 + G W Sbjct: 373 ETGGLTGSW 381 >gi|218442220|ref|YP_002380549.1| ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 7424] gi|218174948|gb|ACK73681.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 7424] Length = 355 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 13/132 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I + PH ++ M A E + + + +G+ Sbjct: 227 RDELSHVRLYQRIIVEAMETFPH-----SVEQIYEMFDTAVQHECRWTNHIVGDNILGIT 281 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK----EKNFFETRVT 114 S EQY +++AN R + IGL+PL++ Y ++P+ + D KK + NFFE VT Sbjct: 282 ESSTEQYTKYLANHRLNTIGLKPLYEDEKYKKSPYSHLERFSDTKKDAHTKANFFEATVT 341 Query: 115 EYQQGAELK-WD 125 Y + + WD Sbjct: 342 SYVMSSGVTGWD 353 >gi|56418235|gb|AAV91049.1| ribonucleotide reductase beta subunit [Grouper iridovirus] Length = 384 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 5/129 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP--KGFV 58 +RDE++H+ + + E P L T++ + + A LE A+ Sbjct: 253 VRDENIHVEGVSRLFETLCAEYPWLMTEKLVRDCKKDAERAAELEFAFIDLAFSYCPALD 312 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEKNFFETRVTEY 116 GL S + Y+ ++ N R +GL L ENP PW+ +I+ NFFE VTEY Sbjct: 313 GLTPSSVKNYVLYVINLRASHMGLPKLMASAPSENPLPWVKWLIEGADLTNFFENHVTEY 372 Query: 117 QQGA-ELKW 124 + G W Sbjct: 373 ETGGLTGSW 381 >gi|257462865|ref|ZP_05627271.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp. D12] Length = 348 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 9/130 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I +IK EN + + +++ R M A EI + + +G+ Sbjct: 220 RDELSHVVLFQKIIREIKAENHNFF---EEEEIRAMFRTAVEQEILWTEHIIGNRILGIT 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK----EKNFFETRVTEY 116 + E Y +++AN R IGL P+++ T+NP+ + D + + NFFE VT Y Sbjct: 277 TETTEAYTKWLANERLRTIGLAPMYEEFTKNPYKHLERFADTEGDGNVKSNFFEGTVTSY 336 Query: 117 QQGAELK-WD 125 + + WD Sbjct: 337 NMSSSIDGWD 346 >gi|239993885|ref|ZP_04714409.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas macleodii ATCC 27126] Length = 376 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 5/105 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL+ ++N ++P + +E ++++R + A E +A G Sbjct: 237 RDENLHLSSTQHILNLWAKGKDDPEMAQIAEECKEEARAIFMNAVEQEKQWADYLFQNGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101 +GLN QY+++IAN+R IGL+ F+ + NP PWM+ ++ Sbjct: 297 MIGLNKEILCQYVEYIANQRMSAIGLDTPFEISSNPLPWMNNYLN 341 >gi|172036555|ref|YP_001803056.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp. ATCC 51142] gi|171698009|gb|ACB50990.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp. ATCC 51142] Length = 352 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 13/132 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I + + PH ++ M A E + + + +G+ Sbjct: 224 RDELSHVRLYQKLIPEARKVFPH-----SVEQIYEMFDMAVNYECRWTNHIVGNNILGIT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK----EKNFFETRVT 114 S E+Y +++AN R IGLEPL+ Y ++P+ + D KK + NFFE VT Sbjct: 279 ESSTEKYTKYLANIRLRSIGLEPLYPEPKYNKSPYTHLERFSDTKKEAHTKANFFEATVT 338 Query: 115 EYQQGAELK-WD 125 Y + + WD Sbjct: 339 SYVMSSGVTGWD 350 >gi|71276518|ref|ZP_00652793.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Dixon] gi|71900741|ref|ZP_00682863.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1] gi|170729741|ref|YP_001775174.1| ribonucleotide-diphosphate reductase subunit beta [Xylella fastidiosa M12] gi|71162695|gb|EAO12422.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Dixon] gi|71729511|gb|EAO31620.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1] gi|167964534|gb|ACA11544.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa M12] Length = 349 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T A LE + E + G G++ Sbjct: 221 RDELAHTKFISEVIRAIVGENPELQTDALTDYVHQAFAHAIELETQWTGEVL-NGIDGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L+ + T+N PW+ D + + +FFE R Y++ Sbjct: 280 VEEMIRYVKYRANKMAGMLGIETLYTETTDNVMPWIRAYADNFTETKTDFFEMRNASYKK 339 >gi|119485472|ref|ZP_01619800.1| hypothetical protein L8106_10031 [Lyngbya sp. PCC 8106] gi|119457228|gb|EAW38354.1| hypothetical protein L8106_10031 [Lyngbya sp. PCC 8106] Length = 359 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 13/132 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I + PH ++ M A E + + + + +G+ Sbjct: 231 RDELSHVRLYQKLIPEAMQTFPH-----SVEQIYEMFDTAVQHECRWTNHIVGRNILGIT 285 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK----EKNFFETRVT 114 S EQY +++AN R IGL+PL+ +Y+++P+ + D KK + NFFE VT Sbjct: 286 ETSTEQYTKYLANARLRSIGLKPLYTDPRYSKSPYTHLERFSDTKKEAHTKANFFEASVT 345 Query: 115 EYQQGAEL-KWD 125 Y + + WD Sbjct: 346 SYVMSSGVGGWD 357 >gi|317060491|ref|ZP_07924976.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium sp. D12] gi|313686167|gb|EFS23002.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium sp. D12] Length = 344 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 9/130 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I +IK EN + + +++ R M A EI + + +G+ Sbjct: 216 RDELSHVVLFQKIIREIKAENHNFF---EEEEIRAMFRTAVEQEILWTEHIIGNRILGIT 272 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK----EKNFFETRVTEY 116 + E Y +++AN R IGL P+++ T+NP+ + D + + NFFE VT Y Sbjct: 273 TETTEAYTKWLANERLRTIGLAPMYEEFTKNPYKHLERFADTEGDGNVKSNFFEGTVTSY 332 Query: 117 QQGAELK-WD 125 + + WD Sbjct: 333 NMSSSIDGWD 342 >gi|269866968|ref|XP_002652448.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220062479|gb|EED41609.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] Length = 100 Score = 113 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 2/86 (2%) Query: 34 SRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF 93 + ++ EA +E + E++P +G+N QY++F+A+R +G + ++ + NPF Sbjct: 1 MKDIVREAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPF 59 Query: 94 PWMSEVIDLKKEKNFFETRVTEYQQG 119 +M E I L+ + NFFE R YQ+G Sbjct: 60 DFM-ENISLQGKTNFFERREANYQKG 84 >gi|166367085|ref|YP_001659358.1| ribonucleoside-diphosphate reductase beta chain [Microcystis aeruginosa NIES-843] gi|166089458|dbj|BAG04166.1| ribonucleoside-diphosphate reductase beta chain [Microcystis aeruginosa NIES-843] Length = 283 Score = 113 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 13/132 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I + H ++ M A E + + + +G+ Sbjct: 155 RDELSHVRLYQKLIPEAMATFSH-----SVEQIYEMFDTAVKHECRWTNHIVGNDILGIT 209 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK----EKNFFETRVT 114 S EQY +++AN R IGLEPL+ KY ++P+ + D KK + NFFE VT Sbjct: 210 EYSTEQYTKYLANIRLKAIGLEPLYREEKYNKSPYNHLERFSDTKKEGHTKANFFEATVT 269 Query: 115 EYQQGAELK-WD 125 Y + L WD Sbjct: 270 SYVMSSGLTGWD 281 >gi|332708567|ref|ZP_08428541.1| ribonucleotide reductase, beta subunit [Lyngbya majuscula 3L] gi|332352664|gb|EGJ32230.1| ribonucleotide reductase, beta subunit [Lyngbya majuscula 3L] Length = 344 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 13/132 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I P+ ++ M A E + + + +G+ Sbjct: 216 RDELSHVRLYQKLIPMAMDVFPY-----SSEQIYEMFATAVEHECRWTNHIVGNDILGIT 270 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK----EKNFFETRVT 114 S E Y +++AN R IGL+PL+ Y ++P+ + D KK + NFFE VT Sbjct: 271 ERSTEHYTKYLANIRLRSIGLDPLYKGENYQKSPYSHLERFSDTKKDAHTKANFFEASVT 330 Query: 115 EYQQGAELK-WD 125 Y + + WD Sbjct: 331 SYVMSSGVSGWD 342 >gi|319790519|ref|YP_004152152.1| ribonucleotide reductase [Thermovibrio ammonificans HB-1] gi|317115021|gb|ADU97511.1| ribonucleotide reductase [Thermovibrio ammonificans HB-1] Length = 352 Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 7/129 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ + + E + + K M A E ++ + + +G+N Sbjct: 224 RDELTHVILFEHFMKDLTDEGFKKY--LTKDKIYDMFRIAVDQEQRFSKKVIGNKILGMN 281 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK----EKNFFETRVTEYQ 117 S E Y +IAN+R +GLEP+F NP+ + + D + NFFE VT Y Sbjct: 282 EQSIEDYTFYIANKRLKALGLEPIFPDRGNPYEHLERIADTGGEANVKANFFEATVTSYN 341 Query: 118 QGAELK-WD 125 Q ++ WD Sbjct: 342 QANAVEGWD 350 >gi|228861279|ref|YP_002854302.1| ribonucleotide reductase small subunit [Soft-shelled turtle iridovirus] gi|45550045|gb|AAS67856.1| ribonucleotide reductase small subunit [Rana grylio virus 9506] gi|194307559|gb|ACF42289.1| ribonucleotide reductase small subunit [Soft-shelled turtle iridovirus] Length = 387 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 5/129 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK--GFV 58 +RDE++H+ + + E P + TK+ + + LE A+ + Sbjct: 252 VRDENIHVEGVSKLFETLNSEYPWVVTKDLIELFKEDAERVAELEEAFVDLAFQECGPVC 311 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDLKKEKNFFETRVTEY 116 GL + Y+ ++ N R +GL L + P PW+ +ID NFFE VTEY Sbjct: 312 GLEPKQVKDYVLYVINLRAANMGLPKLIERAPEACPIPWVKWLIDGADLTNFFENHVTEY 371 Query: 117 QQGA-ELKW 124 + G W Sbjct: 372 ETGGLTGSW 380 >gi|15837799|ref|NP_298487.1| ribonucleotide-diphosphate reductase subunit beta [Xylella fastidiosa 9a5c] gi|28198393|ref|NP_778707.1| ribonucleotide-diphosphate reductase subunit beta [Xylella fastidiosa Temecula1] gi|9106169|gb|AAF84007.1|AE003954_4 ribonucleoside-diphosphate reductase beta chain [Xylella fastidiosa 9a5c] gi|28056463|gb|AAO28356.1| ribonucleoside-diphosphate reductase beta chain [Xylella fastidiosa Temecula1] Length = 346 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T A LE + E + G G++ Sbjct: 218 RDELAHTKFISEVIRAIVGENPELQTDALTDYVHQAFAHAIELETQWTGEVL-DGIDGID 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G++ L+ + T+N PW+ D + + +FFE R Y++ Sbjct: 277 VEEMIRYVKYRANKMAGMLGIQTLYTETTDNVMPWIRAYADNFTETKTDFFEMRNASYKK 336 >gi|307151334|ref|YP_003886718.1| ribonucleotide reductase [Cyanothece sp. PCC 7822] gi|306981562|gb|ADN13443.1| ribonucleotide reductase [Cyanothece sp. PCC 7822] Length = 355 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 13/132 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I + PH K M A E + + + +G+ Sbjct: 227 RDELSHVRLYQKIIAEAMQTFPHSVDK-----VYEMFDTAVHHECRWTNHIVGDNILGIT 281 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK----EKNFFETRVT 114 S EQY +++AN R IGL+PL+ KY ++P+ + D KK + NFFE VT Sbjct: 282 ESSTEQYTKYLANIRLKAIGLKPLYADEKYQKSPYSHLERFSDTKKDAHTKANFFEATVT 341 Query: 115 EYQQGAELK-WD 125 Y + + WD Sbjct: 342 SYVMSSGVTGWD 353 >gi|49237365|ref|YP_031646.1| ribonucleoside diphosphate reductase beta subunit-like protein [Frog virus 3] gi|47060183|gb|AAT09727.1| ribonucleoside diphosphate reductase beta subunit-like protein [Frog virus 3] Length = 387 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 5/129 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK--GFV 58 +RDE++H+ + + E P + TK+ + + LE A+ + Sbjct: 252 VRDENIHVEGVSKLFETLNSEYPWVVTKDLIELFKEDAERVAELEEAFVDLAFQECGPVC 311 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDLKKEKNFFETRVTEY 116 GL + Y+ ++ N R +GL L + P PW+ +ID NFFE VTEY Sbjct: 312 GLEPKQVKDYVLYVINLRAANMGLPKLIERAPEACPIPWVKWLIDGADLTNFFENHVTEY 371 Query: 117 QQGA-ELKW 124 + G W Sbjct: 372 ETGGLTGSW 380 >gi|71901120|ref|ZP_00683227.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1] gi|182681036|ref|YP_001829196.1| ribonucleotide-diphosphate reductase subunit beta [Xylella fastidiosa M23] gi|71729125|gb|EAO31249.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1] gi|182631146|gb|ACB91922.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa M23] gi|307579504|gb|ADN63473.1| ribonucleotide-diphosphate reductase subunit beta [Xylella fastidiosa subsp. fastidiosa GB514] Length = 349 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T A LE + E + G G++ Sbjct: 221 RDELAHTKFISEVIRAIVGENPELQTDALTDYVHQAFAHAIELETQWTGEVL-DGIDGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G++ L+ + T+N PW+ D + + +FFE R Y++ Sbjct: 280 VEEMIRYVKYRANKMAGMLGIQTLYTETTDNVMPWIRAYADNFTETKTDFFEMRNASYKK 339 >gi|51869996|ref|YP_073549.1| Ribonucleotide reductase [Lymphocystis disease virus - isolate China] gi|51858204|gb|AAU10888.1| Ribonucleotide reductase [Lymphocystis disease virus - isolate China] Length = 374 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 58/126 (46%), Gaps = 3/126 (2%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVG 59 +RDE++H+ + I E P + TK+F + T+ E LE A+ Sbjct: 250 IRDENVHVEGLCKLFKTIVSEYPFILTKDFYKAVETLQQEVLKLETAFVDLVFIEDKLKN 309 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 L Y+++I RR Q+GL +NP W+S +I + NFFE RVTEY G Sbjct: 310 LKRVDVINYVKYILQRRTVQLGLSNKTDL-QNPILWVSWLISGRDVTNFFENRVTEYDVG 368 Query: 120 A-ELKW 124 E W Sbjct: 369 GLEGDW 374 >gi|122921307|pdb|2O1Z|A Chain A, Plasmodium Vivax Ribonucleotide Reductase Subunit R2 (Pv086155) gi|122921308|pdb|2O1Z|B Chain B, Plasmodium Vivax Ribonucleotide Reductase Subunit R2 (Pv086155) Length = 311 Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 52/96 (54%), Gaps = 8/96 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ + P + + ++ EA +E ++ E++P +G+N Sbjct: 223 RDEGLHTDFNCLIYSLLENKLPE-------EVVQNIVKEAVEVERSFICESLPCDLIGMN 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 + QY++F+A+R +G +F + +NPF WM Sbjct: 276 SRLMSQYIEFVADRLLECLGSPKIF-HAKNPFNWMD 310 >gi|269468252|gb|EEZ79942.1| ribonucleotide-diphosphate reductase subunit beta [uncultured SUP05 cluster bacterium] Length = 319 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + KE + + M EA E +A G Sbjct: 177 RDEALHLTGTQHMLNLMRDGKDDPDMEKIAKECENEVIQMFKEACEQEKDWAEYLFRDGS 236 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKNF-FETRVT 114 +GLNA +QY+++I N R + +GL+P+F ++ NP PW++ +D + ET +T Sbjct: 237 MIGLNADILKQYLEYITNVRMNALGLKPIFDEHVTNPLPWINSWLDSDNVQVAPQETEIT 296 Query: 115 EYQQGA 120 Y A Sbjct: 297 SYLVSA 302 >gi|332141553|ref|YP_004427291.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas macleodii str. 'Deep ecotype'] gi|327551575|gb|AEA98293.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas macleodii str. 'Deep ecotype'] Length = 376 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 5/105 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL+ ++N ++P + +E ++++R + A E +A G Sbjct: 237 RDENLHLSSTQHILNLWAKGKDDPEMAQIAQECKEEARAIFMNAVEQEKEWADYLFKTGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101 +GLN QY+++IAN+R IGL+ F + NP PWM+ ++ Sbjct: 297 MIGLNKEILCQYVEYIANQRMSAIGLDTPFDISSNPLPWMNNYLN 341 >gi|294955280|ref|XP_002788462.1| ribonucleoside-diphosphate reductase small chain, putative [Perkinsus marinus ATCC 50983] gi|239903931|gb|EER20258.1| ribonucleoside-diphosphate reductase small chain, putative [Perkinsus marinus ATCC 50983] Length = 157 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Query: 41 ATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 A +E + + +P G +G+NA +Y++F+A+R +G ++ NPF WM+ +I Sbjct: 38 AVNVEREFITDALPVGLIGMNAELMGRYIEFVADRLLVALGYAKIYNSA-NPFDWMT-MI 95 Query: 101 DLKKEKNFFETRVT 114 L+ + NFFE RV Sbjct: 96 SLQGKTNFFEKRVG 109 >gi|71033209|ref|XP_766246.1| ribonucleotide-diphosphate reductase small subunit [Theileria parva strain Muguga] gi|68353203|gb|EAN33963.1| ribonucleotide-diphosphate reductase small subunit, putative [Theileria parva] Length = 308 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 60/112 (53%), Gaps = 19/112 (16%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +FG + + +K + P + + ++ EA ++E +Y +++P +G+N Sbjct: 201 RDEGLHADFGCFIYHNLKHKLPE-------EAVQQIIKEAVVVERSYICDSLPCDLIGMN 253 Query: 62 A----------PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK 103 + QY++F+A+R +G+ P++ T NPF WM ++I ++ Sbjct: 254 SRKKILTHCLIELMTQYIEFVADRLLQALGVRPVYNVT-NPFDWM-QLISVQ 303 >gi|16332312|ref|NP_443040.1| hypothetical protein slr0591 [Synechocystis sp. PCC 6803] gi|1653942|dbj|BAA18852.1| slr0591 [Synechocystis sp. PCC 6803] Length = 355 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 13/132 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I + H + M +A E + + + +G+ Sbjct: 227 RDELSHVRLYQKLIPEAMQVFTH-----STDQIYEMFDKAVEFECRWTNHIVGNNILGIT 281 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK----EKNFFETRVT 114 S EQY +++AN R IGL+PL+ +Y ++P+ + D KK + NFFE VT Sbjct: 282 ESSTEQYTKYLANSRLRAIGLDPLYTDARYGKSPYTHLERFSDTKKEAHTKANFFEATVT 341 Query: 115 EYQQGAELK-WD 125 Y + + WD Sbjct: 342 SYVMSSGVSGWD 353 >gi|78486104|ref|YP_392029.1| ribonucleotide-diphosphate reductase subunit beta [Thiomicrospira crunogena XCL-2] gi|78364390|gb|ABB42355.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Thiomicrospira crunogena XCL-2] Length = 377 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL+ +IN + ++P + KE ++K + EA E +A G Sbjct: 238 RDEALHLSGTQHLINILSEGKDDPEMMEIAKENEEKVYEIFREAAEQEKEWADYLFKDGS 297 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 +GLNA + Y+++I N R I L P+F+ NP PWM+ + Sbjct: 298 MIGLNASILKDYVEYITNTRIKAIKLNPIFENKSNPLPWMNNWL 341 >gi|78049716|ref|YP_365891.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78038146|emb|CAJ25891.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 347 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I EN L E A LE + E + G G++ Sbjct: 219 RDELAHTKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++ Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337 >gi|70921511|ref|XP_734071.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56506464|emb|CAH78308.1| hypothetical protein PC000956.02.0 [Plasmodium chabaudi chabaudi] Length = 87 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 25/75 (33%), Positives = 46/75 (61%), Gaps = 2/75 (2%) Query: 48 YAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107 + ++P +G+N+ QY++F+A+R +G +F +++NPF WM +I L+ + N Sbjct: 1 FLVWSLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKVF-HSKNPFSWMD-LISLQGKTN 58 Query: 108 FFETRVTEYQQGAEL 122 FFE RV +YQ+ + Sbjct: 59 FFEKRVADYQKSGVM 73 >gi|170077010|ref|YP_001733648.1| ribonucleoside-diphosphate reductase, beta subunit [Synechococcus sp. PCC 7002] gi|169884679|gb|ACA98392.1| ribonucleoside-diphosphate reductase, beta subunit [Synechococcus sp. PCC 7002] Length = 352 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 13/132 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H+ +I + H M+ A E + + + +G+ Sbjct: 224 RDELSHVRLFQKLIPEAMATFDH-----SVDHIYEMVERAVQYECQWTNHIVGNDILGIT 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK----EKNFFETRVT 114 S E Y +++AN R IGLEPL+K Y ++P+ + D KK + NFFE VT Sbjct: 279 EQSTEIYTKYLANIRLQAIGLEPLYKGDQYKKSPYRHLERFSDTKKEGNTKANFFEAGVT 338 Query: 115 EYQQGAELK-WD 125 Y + + WD Sbjct: 339 SYVMSSGITGWD 350 >gi|195953600|ref|YP_002121890.1| Ribonucleoside-diphosphate reductase [Hydrogenobaculum sp. Y04AAS1] gi|195933212|gb|ACG57912.1| Ribonucleoside-diphosphate reductase [Hydrogenobaculum sp. Y04AAS1] Length = 319 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 34/113 (30%), Positives = 65/113 (57%), Gaps = 4/113 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 ++DE+ HL FGI ++N++ + +++ K R ++ EA +E YA MP+ +GL Sbjct: 209 LKDETRHLAFGIYLLNELLKDK---NKNDYKDKFRVLMEEAVDIETEYARVAMPEKIIGL 265 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 113 + + Y++++A+RR +G + ++ +NP W++ DL NFFE +V Sbjct: 266 SFETYTSYVKYLADRRMRSLGFDAIY-GQKNPMKWLTTQTDLPDLTNFFEAKV 317 >gi|332993182|gb|AEF03237.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas sp. SN2] Length = 376 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 5/105 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL+ ++N ++P + ++ ++++R + A E +A G Sbjct: 237 RDENLHLSSTQHILNLWARSKDDPEMAQIAQDCKEEARAIFMNAVEQEKEWADYLFKTGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101 +GLN Y+++IAN+R IGL+ F+ + NP PWM+ ++ Sbjct: 297 MIGLNKEILCSYVEYIANQRMTAIGLDAPFEISSNPLPWMNNYLN 341 >gi|326560494|gb|EGE10876.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella catarrhalis 7169] gi|326570427|gb|EGE20467.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella catarrhalis BC8] gi|326575699|gb|EGE25622.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella catarrhalis CO72] gi|326577166|gb|EGE27060.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella catarrhalis O35E] Length = 376 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +IN ++ ++P + + Q+++ + A E A+A+ G Sbjct: 237 RDEALHLNGTQHMINLMRQGRDDPDMVAIAEACQEEAIEIFKSAAEQEKAWANYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY++FI N R IGL +F+ NP PW++ + + ET +T Sbjct: 297 MIGLNRDILCQYIEFITNTRMSAIGLPAIFETKTNPIPWINAWLSSDNVQVAPQETEITT 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|296113118|ref|YP_003627056.1| ribonucleoside-diphosphate reductase 1 subunit beta [Moraxella catarrhalis RH4] gi|295920812|gb|ADG61163.1| ribonucleoside-diphosphate reductase 1 subunit beta [Moraxella catarrhalis RH4] Length = 380 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +IN ++ ++P + + Q+++ + A E A+A+ G Sbjct: 241 RDEALHLNGTQHMINLMRQGRDDPDMVAIAEACQEEAIEIFKSAAEQEKAWANYLFKDGS 300 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY++FI N R IGL +F+ NP PW++ + + ET +T Sbjct: 301 MIGLNRDILCQYIEFITNTRMSAIGLPAIFETKTNPIPWINAWLSSDNVQVAPQETEITT 360 Query: 116 Y 116 Y Sbjct: 361 Y 361 >gi|326560111|gb|EGE10501.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella catarrhalis 46P47B1] gi|326564174|gb|EGE14410.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella catarrhalis 12P80B1] gi|326573404|gb|EGE23372.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella catarrhalis 101P30B1] Length = 376 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +IN ++ ++P + + Q+++ + A E A+A+ G Sbjct: 237 RDEALHLNGTQHMINLMRQGRDDPDMVAIAEACQEEAIEIFKSAAEQEKAWANYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY++FI N R IGL +F+ NP PW++ + + ET +T Sbjct: 297 MIGLNRDILCQYIEFITNTRMSAIGLPAIFETKTNPIPWINAWLSSDNVQVAPQETEITT 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|330949821|gb|EGH50081.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae Cit 7] Length = 65 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 42/65 (64%), Positives = 48/65 (73%) Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 N E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G Sbjct: 1 NGAGMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 60 Query: 121 ELKWD 125 L WD Sbjct: 61 ALSWD 65 >gi|71280050|ref|YP_269047.1| ribonucleotide-diphosphate reductase subunit beta [Colwellia psychrerythraea 34H] gi|71145790|gb|AAZ26263.1| ribonucleotide reductase, beta subunit [Colwellia psychrerythraea 34H] Length = 376 Score = 110 bits (277), Expect = 4e-23, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + ++E + + + + E +A G Sbjct: 237 RDEALHLTGTQHILNNWRSGKDDPEMKIISEELRDEGLQIFLDVVEQEKEWAQYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 +GLNA QY+++I+N+R IG F NP PWM+ + Sbjct: 297 MIGLNADILNQYIEYISNQRLTAIGFGAPFDIKSNPLPWMNAYL 340 >gi|225734460|gb|ACO25228.1| hypothetical protein [Epizootic haematopoietic necrosis virus] Length = 387 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 5/129 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK--GFV 58 +RDE++H+ + + E P + ++ + + LE A+ + Sbjct: 252 VRDENMHVEGVSKLFETLNSEYPWVVNEDLIELFKEDAERVAELEEAFVDLAFQECGPVC 311 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDLKKEKNFFETRVTEY 116 GL + Y+ ++ N R +GL L + P PW+ +ID NFFE VTEY Sbjct: 312 GLEPKQVKDYVLYVINLRASNMGLPRLIERAPEACPIPWVKWLIDGADLTNFFENHVTEY 371 Query: 117 QQGA-ELKW 124 + G W Sbjct: 372 ETGGLTGSW 380 >gi|45686047|ref|YP_003810.1| unknown [Ambystoma tigrinum virus] gi|37722471|gb|AAP33216.1| unknown [Ambystoma tigrinum stebbensi virus] Length = 387 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 5/129 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK--GFV 58 +RDE++H+ + + E P + T++ + + LE A+ + Sbjct: 252 VRDENIHVEGVSKLFETLNSEYPWVVTEDLIELFKEDAERVAELEEAFVDLAFQECGPVC 311 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDLKKEKNFFETRVTEY 116 GL + Y+ ++ N R +GL L + P PW+ +ID NFFE VTEY Sbjct: 312 GLEPKQVKDYVLYVINLRASNMGLPRLIERAPEACPIPWVKWLIDGADLTNFFENHVTEY 371 Query: 117 QQGA-ELKW 124 + G W Sbjct: 372 ETGGLTGSW 380 >gi|13358428|ref|NP_078636.1| Ribonucleotide reductase small subunit [Lymphocystis disease virus 1] Length = 378 Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 3/119 (2%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK--GFV 58 +RDE++H+ + E + T+EF R + E LE + Sbjct: 251 IRDENIHVEGLCKLFKTFISEYSFILTEEFFSAVRKIQAEVLQLETDFIILLFTNITEIK 310 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNFFETRVTEY 116 GL Y+++I RR Q+GL + NP W+S +I + NFFE RVTEY Sbjct: 311 GLTKLCMINYVKYILQRRTEQLGLLESTEVLLTNPIDWISWLIAGRNITNFFENRVTEY 369 >gi|326565416|gb|EGE15593.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella catarrhalis 103P14B1] Length = 376 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +IN ++ ++P + + Q+++ + A E A+A+ G Sbjct: 237 RDEALHLNGTQHMINLMRQGRDDPDMVAIAEACQEEAIEIFKSAAEQEKAWANYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY++FI N R IGL +F+ NP PW++ + + ET +T Sbjct: 297 MIGLNRDILCQYIEFITNTRMSAIGLPAIFETKTNPIPWINAWLSSDNVQVAPQETEITT 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|170587050|ref|XP_001898292.1| ribonucleotide reductase 2 [Brugia malayi] gi|158594687|gb|EDP33271.1| ribonucleotide reductase 2, putative [Brugia malayi] Length = 288 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 30/133 (22%), Positives = 62/133 (46%), Gaps = 15/133 (11%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEF-------------QQKSRTMLHEATLLEIAYAH 50 E++H +I+ + ++F +K +M + + Y Sbjct: 145 ENIHSEMYSKMIDTYIRDQKQKKFRKFCVTLCFLEINLSNYKKFTSMFNACIDAKQEYLT 204 Query: 51 ETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFE 110 E +P +G+N QY++++A+ ++ ++ +++NPF +M E I ++ + NFFE Sbjct: 205 EALPVDLIGINCKLMCQYIEYVADHLLTELHCAKIY-HSDNPFDFM-ERISIEAKTNFFE 262 Query: 111 TRVTEYQQGAELK 123 RV+EYQ+ L Sbjct: 263 KRVSEYQKAGVLS 275 >gi|21244791|ref|NP_644373.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas axonopodis pv. citri str. 306] gi|325927516|ref|ZP_08188754.1| ribonucleotide reductase, beta subunit [Xanthomonas perforans 91-118] gi|21110489|gb|AAM38909.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas axonopodis pv. citri str. 306] gi|325542109|gb|EGD13613.1| ribonucleotide reductase, beta subunit [Xanthomonas perforans 91-118] Length = 347 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I EN L E A LE + E + G G++ Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++ Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337 >gi|188578920|ref|YP_001915849.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas oryzae pv. oryzae PXO99A] gi|188523372|gb|ACD61317.1| ribonucleoside-diphosphate reductase, beta subunit [Xanthomonas oryzae pv. oryzae PXO99A] Length = 347 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I EN L E A LE + E + G G++ Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++ Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337 >gi|58580098|ref|YP_199114.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas oryzae pv. oryzae KACC10331] gi|84622097|ref|YP_449469.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|58424692|gb|AAW73729.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas oryzae pv. oryzae KACC10331] gi|84366037|dbj|BAE67195.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 347 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I EN L E A LE + E + G G++ Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++ Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337 >gi|229916488|ref|YP_002885134.1| ribonucleotide-diphosphate reductase subunit beta [Exiguobacterium sp. AT1b] gi|229467917|gb|ACQ69689.1| Ribonucleoside-diphosphate reductase [Exiguobacterium sp. AT1b] Length = 346 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 6/125 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLW-TKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 RDE H F ++ + ENP + +F Q + EA LEI + + + GL Sbjct: 216 RDEMQHSYFISQLLRAVLTENPKIDENGQFSQFVYDTMAEAVDLEIEWCEYVL-RDLDGL 274 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID--LK-KEKNFFETRVTEY 116 + Y++++AN+R IGL L++ E+ PW+ D L + +FFE + Y Sbjct: 275 DVSEMRDYVKYLANKRLRVIGLNDLYEGFDEDVMPWIRAYSDDSLNATKSDFFEQKSRSY 334 Query: 117 QQGAE 121 + + Sbjct: 335 AKVTD 339 >gi|166710317|ref|ZP_02241524.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas oryzae pv. oryzicola BLS256] Length = 347 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I EN L E A LE + E + G G++ Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAINLETQWTAEVL-DGIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++ Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337 >gi|225850104|ref|YP_002730338.1| ribonucleoside-diphosphate reductase, beta subunit [Persephonella marina EX-H1] gi|225645787|gb|ACO03973.1| ribonucleoside-diphosphate reductase, beta subunit [Persephonella marina EX-H1] Length = 329 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 3/116 (2%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKE-FQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60 DESLHL GI+ I I ENP + E F + + + +A LE+ Y G+ Sbjct: 212 DESLHLQNGIEAILTIVEENPEIVDDEKFVENIKETIIDAVELELNYLKTKFGGTTIFGV 271 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 + E+YM++IA+RR ++G +P FK +NP ++ + D+KK NFFE TEY Sbjct: 272 SYKELEKYMKYIADRRLEELGFDPQFKIDQNPLKFL-QKEDVKKLTNFFEVSSTEY 326 >gi|300723737|ref|YP_003713044.1| ribonucleoside-diphosphate reductase 1 subunit beta [Xenorhabdus nematophila ATCC 19061] gi|297630261|emb|CBJ90912.1| ribonucleoside-diphosphate reductase 1, beta subunit [Xenorhabdus nematophila ATCC 19061] Length = 376 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + KE +QK + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAKECEQKCYDLFVDAAEQEKEWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLKLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|18656506|gb|AAL77807.1|AF389451_14 ribonucleoside-diphosphate reductase beta subunit [Tiger frog virus] Length = 387 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 5/129 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK--GFV 58 +RDE++H+ + + E P + TK+ + + LE A+ + Sbjct: 252 VRDENIHVEGVSKLFETLNSEYPWVVTKDIIELFKEDAERVAELEEAFVDLAFQECGPVC 311 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDLKKEKNFFETRVTEY 116 L + Y+ ++ N R +GL L + P PW+ +ID NFFE VTEY Sbjct: 312 ELEPKQVKDYVLYVINLRAANMGLPKLIERAPEACPIPWVKWLIDGADLTNFFENHVTEY 371 Query: 117 QQGA-ELKW 124 + G W Sbjct: 372 ETGGLTGSW 380 >gi|326796346|ref|YP_004314166.1| ribonucleoside-diphosphate reductase [Marinomonas mediterranea MMB-1] gi|326547110|gb|ADZ92330.1| Ribonucleoside-diphosphate reductase [Marinomonas mediterranea MMB-1] Length = 377 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q+ + EA E +A G Sbjct: 238 RDEALHLTGTQHMLNLMTSGKDDPEMAIIAQECRQEITDIFIEAAQQEKEWAKYLFKDGS 297 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLNA QY+++I+N R +GLEP F+ NP PW++ ++ + E ++ Sbjct: 298 MIGLNAEILGQYVEYISNVRMQAVGLEPAFETKSNPIPWINAWLVSDNVQVAPQEAEISS 357 Query: 116 Y 116 Y Sbjct: 358 Y 358 >gi|172058301|ref|YP_001814761.1| ribonucleotide-diphosphate reductase subunit beta [Exiguobacterium sibiricum 255-15] gi|171990822|gb|ACB61744.1| Ribonucleoside-diphosphate reductase [Exiguobacterium sibiricum 255-15] Length = 347 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 6/125 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 RDE H F ++ + E+P + F + A LEI ++ + + GL Sbjct: 217 RDELQHSYFISQLLRAVLTEHPDIDADGSFTKFVYATFERAVDLEIEWSEYVL-RDLDGL 275 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK---EKNFFETRVTEY 116 + Y++++AN+R IGL+ L++ + E+ PW+ D + +FFE + Y Sbjct: 276 DVSEMRDYVKYLANKRLRVIGLDDLYEGHDEDVMPWIRAYSDDSMNATKSDFFEQKSRSY 335 Query: 117 QQGAE 121 + + Sbjct: 336 AKVTD 340 >gi|289664735|ref|ZP_06486316.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 349 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I EN L E A LE + E + G G++ Sbjct: 221 RDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETVWTAEVL-DGIDGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++ Sbjct: 280 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 339 >gi|295098106|emb|CBK87196.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 420 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 281 RDEALHLTGTQHMLNLLRSGADDPEMAAIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 340 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 341 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 400 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 401 YLVGQIDSEVNTD 413 >gi|297724673|ref|NP_001174700.1| Os06g0257450 [Oryza sativa Japonica Group] gi|255676900|dbj|BAH93428.1| Os06g0257450 [Oryza sativa Japonica Group] Length = 162 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 2/64 (3%) Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +N QY++F+A+R +G + ++ NPF WM E+I L+ + NFFE RV +YQ+ Sbjct: 83 MNGDLMSQYIEFVADRLLMALGCKKMYNVA-NPFDWM-ELISLQGKTNFFEKRVGDYQKA 140 Query: 120 AELK 123 + + Sbjct: 141 SVMS 144 >gi|289670858|ref|ZP_06491933.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 349 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I EN L + A LE + E + G G++ Sbjct: 221 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++ Sbjct: 280 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 339 >gi|294625675|ref|ZP_06704297.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294664800|ref|ZP_06730124.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292600044|gb|EFF44159.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605431|gb|EFF48758.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 347 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I EN L + A LE + E + G G++ Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++ Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337 >gi|288549884|ref|ZP_06390831.1| ribonucleoside-diphosphate reductase, beta subunit [Enterobacter cancerogenus ATCC 35316] gi|288317051|gb|EFC55989.1| ribonucleoside-diphosphate reductase, beta subunit [Enterobacter cancerogenus ATCC 35316] Length = 420 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 281 RDEALHLTGTQHMLNLLRSGTDDPEMAAIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 340 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 341 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 400 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 401 YLVGQIDSEVNTD 413 >gi|326784480|ref|YP_004325029.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM7] gi|310004513|gb|ADO98905.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM7] Length = 388 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 8/127 (6%) Query: 2 RDESLHLNFGIDVINQI--KIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDES HL ++ ++P + +E Q+ M E A+A+ +G Sbjct: 247 RDESQHLVLTQQILKNWTEGKDDPEMKEIAEEEQETVEQMFKACVDEEKAWANYLFKEGS 306 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEKNF-FETRV 113 +GLN Y+++IANRR IGL+P++ NP PW ++ K ++N ET + Sbjct: 307 MIGLNERLLHNYVEWIANRRMKAIGLKPIYDQPLRNNPLPWTEHWLNSKGQQNAPQETEI 366 Query: 114 TEYQQGA 120 Y G Sbjct: 367 ESYVVGG 373 >gi|213609160|ref|ZP_03368986.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 144 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + +E +Q+ + +A E +A G Sbjct: 5 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 64 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 65 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 124 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 125 YLVGQIDSEVDTD 137 >gi|163784572|ref|ZP_02179421.1| ribonucleotide-diphosphate [Hydrogenivirga sp. 128-5-R1-1] gi|159880158|gb|EDP73813.1| ribonucleotide-diphosphate [Hydrogenivirga sp. 128-5-R1-1] Length = 139 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 3/116 (2%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60 DESLHL GI+ I I ENP + +F + R + +A LE+ Y G+ Sbjct: 22 DESLHLQNGIEAILTIIEENPEIVDDIKFVENIRDTIIDAVELELNYLKTKFGGTTIFGV 81 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 + E YM++IA+RR ++G +P F +NP ++ + D+KK NFFE TEY Sbjct: 82 SYKELEMYMKYIADRRLEELGFDPQFNIQQNPLKFL-QKEDVKKLTNFFEVSSTEY 136 >gi|148244629|ref|YP_001219323.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Vesicomyosocius okutanii HA] gi|146326456|dbj|BAF61599.1| ribonucleoside-diphosphate reductase beta subunit [Candidatus Vesicomyosocius okutanii HA] Length = 378 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 6/125 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + KE +++ TM EA E +A G Sbjct: 237 RDEALHLTGTQHILNLMSDGKDDPDMKKIAKECEKEVITMFKEACEQEKDWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115 +GLNA +QY+++I N R + L P+F NP PW++ +D + ET +T Sbjct: 297 MIGLNAKMLKQYLEYITNVRMKALNLSPVFDECINPLPWINHWLDSDNVQVAPQETEITS 356 Query: 116 YQQGA 120 Y A Sbjct: 357 YLVSA 361 >gi|61806369|ref|YP_214728.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM4] gi|61563913|gb|AAX46968.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM4] Length = 387 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVINQIKI-ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 RDES HL ++ + ++P + KE + + M E A+A +G Sbjct: 247 RDESQHLVITQQILKKWADGDDPEMQEIAKEEKSFVKDMFRNTVNEEKAWADYLFKEGSM 306 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEKNF-FETRVT 114 +GLNA Y+++IANRR IGL+P++ NP PW ++ K ++N ET + Sbjct: 307 IGLNARLLNNYVEWIANRRMKAIGLDPIYDQPLRNNPLPWTEHWLNSKGQQNAPQETEIE 366 Query: 115 EYQQGA 120 Y G Sbjct: 367 SYVIGG 372 >gi|161502570|ref|YP_001569682.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863917|gb|ABX20540.1| hypothetical protein SARI_00614 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 376 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMADIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQIDSEVDTD 369 >gi|90412217|ref|ZP_01220223.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium profundum 3TCK] gi|90326941|gb|EAS43326.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium profundum 3TCK] Length = 377 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+ + EA E +A G Sbjct: 237 RDEALHLTGTQHILNLLRGRHDDPEMADIAQECQQECFEIFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101 +GLN QY+++I N R +GL+ + +NP PW++ + Sbjct: 297 MIGLNKEILCQYVEYITNLRMKAVGLDQAYPGANQNPIPWINSWLS 342 >gi|225849393|ref|YP_002729557.1| ribonucleoside-diphosphate reductase subunit beta [Sulfurihydrogenibium azorense Az-Fu1] gi|225644764|gb|ACN99814.1| ribonucleoside-diphosphate reductase, beta subunit [Sulfurihydrogenibium azorense Az-Fu1] Length = 326 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 3/116 (2%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60 DESLHL GI+ I + ENP + F + R + +A LE+ Y G+ Sbjct: 209 DESLHLQNGIEAILTMVEENPEIVDDYNFVENIRQSIIDAVELELNYLKTKFGGTTIFGV 268 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 + E+YM++IA+RR ++G +P F +NP ++ + D+KK NFFE TEY Sbjct: 269 SYNELERYMKYIADRRLVELGFDPQFGIDQNPLKFL-QKEDVKKLTNFFEVSSTEY 323 >gi|331642864|ref|ZP_08343999.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli H736] gi|331039662|gb|EGI11882.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli H736] Length = 449 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 310 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 369 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 370 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 429 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 430 YLVGQIDSEVDTD 442 >gi|213021870|ref|ZP_03336317.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 277 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + +E +Q+ + +A E +A G Sbjct: 138 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 197 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 198 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 257 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 258 YLVGQIDSEVDTD 270 >gi|290473788|ref|YP_003466662.1| ribonucleoside-diphosphate reductase 1 subunit beta [Xenorhabdus bovienii SS-2004] gi|289173095|emb|CBJ79868.1| ribonucleoside-diphosphate reductase 1, beta subunit [Xenorhabdus bovienii SS-2004] Length = 376 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIARECEQQCYDLFVQAAEQEKEWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLKLPFEARSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|188996383|ref|YP_001930634.1| Ribonucleoside-diphosphate reductase [Sulfurihydrogenibium sp. YO3AOP1] gi|188931450|gb|ACD66080.1| Ribonucleoside-diphosphate reductase [Sulfurihydrogenibium sp. YO3AOP1] Length = 326 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 3/116 (2%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60 DESLHL GI+ I + ENP + +F + R + +A LE+ Y G+ Sbjct: 209 DESLHLQNGIEAILTMVEENPEIVDDYQFVENIRQSIIDAVELELNYLKTKFGGTTIFGV 268 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 + E+YM++IA+RR ++G +P F +NP ++ + D+KK NFFE TEY Sbjct: 269 SYGELERYMKYIADRRLIELGFDPQFGIDQNPLKFL-QKEDVKKLTNFFEVSSTEY 323 >gi|157879968|pdb|1RNR|A Chain A, Autocatalytic Generation Of Dopa In The Engineered Protein R2 F208y From Escherichia Coli Ribonucleotide Reductase And Crystal Structure Of The Dopa-208 Protein gi|157879969|pdb|1RNR|B Chain B, Autocatalytic Generation Of Dopa In The Engineered Protein R2 F208y From Escherichia Coli Ribonucleotide Reductase And Crystal Structure Of The Dopa-208 Protein Length = 375 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F NP PW++ ++ + E V+ Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 356 YLVGQIDSEVDTD 368 >gi|257454213|ref|ZP_05619483.1| ribonucleoside-diphosphate reductase, beta subunit [Enhydrobacter aerosaccus SK60] gi|257448386|gb|EEV23359.1| ribonucleoside-diphosphate reductase, beta subunit [Enhydrobacter aerosaccus SK60] Length = 377 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 10/134 (7%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +IN Q ++P + ++ QQ++ + +A E A+A G Sbjct: 237 RDEALHLNGTQHMINLMQWGKDDPDMVEIAQDCQQQAIEIFKDAAEQEKAWAKYLFKNGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS-EVIDLKKEKNFFETRVT 114 +GLN QY+++I N R IGL P+F + NP PW++ + + E+ +T Sbjct: 297 MIGLNENILVQYVEYITNLRMDAIGLPPIFAAIKNNPIPWINAWLSSDNVQVAPQESEIT 356 Query: 115 EY---QQGAELKWD 125 Y Q AEL D Sbjct: 357 SYLVGQIDAELSDD 370 >gi|163803511|ref|ZP_02197381.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp. AND4] gi|159172687|gb|EDP57538.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp. AND4] Length = 377 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDESLHLN +IN ++ +E +Q+ + EA E +A G Sbjct: 237 RDESLHLNGTQHMINLLRNGQDDFIFMQIAEEVKQECFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101 +GLN QY+++I N R +GL + + T NP PW++ + Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPKAYPEATTNPIPWINAWLS 342 >gi|494379|pdb|1MRR|A Chain A, Substitution Of Manganese For Iron In Ribonucleotide Reductase From Escherichia Coli. Spectroscopic And Crystallographic Characterization gi|494380|pdb|1MRR|B Chain B, Substitution Of Manganese For Iron In Ribonucleotide Reductase From Escherichia Coli. Spectroscopic And Crystallographic Characterization gi|494553|pdb|1RIB|A Chain A, Structure And Function Of The Escherichia Coli Ribonucleotide Reductase Protein R2 gi|494554|pdb|1RIB|B Chain B, Structure And Function Of The Escherichia Coli Ribonucleotide Reductase Protein R2 Length = 375 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F NP PW++ ++ + E V+ Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 356 YLVGQIDSEVDTD 368 >gi|325919223|ref|ZP_08181270.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC 19865] gi|325923021|ref|ZP_08184721.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC 19865] gi|325546491|gb|EGD17645.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC 19865] gi|325550297|gb|EGD21104.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC 19865] Length = 347 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I EN L + A LE + E + G G++ Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWTAEVL-DGIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++ Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337 >gi|226327851|ref|ZP_03803369.1| hypothetical protein PROPEN_01732 [Proteus penneri ATCC 35198] gi|225203555|gb|EEG85909.1| hypothetical protein PROPEN_01732 [Proteus penneri ATCC 35198] Length = 376 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + EA E +A +G Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAEECEQECYDLFVEAAEQEKEWAEYLFSEGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ FK NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLKLPFKARSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +++ D Sbjct: 357 YLVGQIDSQVDTD 369 >gi|42543283|pdb|1PIY|A Chain A, Ribonucleotide Reductase R2 Soaked With Ferrous Ion At Neutral Ph gi|42543284|pdb|1PIY|B Chain B, Ribonucleotide Reductase R2 Soaked With Ferrous Ion At Neutral Ph gi|42543506|pdb|1R65|A Chain A, Crystal Structure Of Ferrous Soaked Ribonucleotide Reductase R2 Subunit (Wildtype) At Ph 5 From E. Coli gi|42543507|pdb|1R65|B Chain B, Crystal Structure Of Ferrous Soaked Ribonucleotide Reductase R2 Subunit (Wildtype) At Ph 5 From E. Coli Length = 375 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F NP PW++ ++ + E V+ Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 356 YLVGQIDSEVDTD 368 >gi|113200701|ref|YP_717864.1| ribonucleotide reductase subunit B [Synechococcus phage syn9] gi|76574600|gb|ABA47165.1| ribonucleotide reductase subunit B [Synechococcus phage syn9] Length = 387 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVINQIKI-ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 RDE+ HL +++N+ + ++P + KE + M E +A G Sbjct: 247 RDENQHLVITQNILNKWREGDDPEMAIIAKEEEVNVVDMFKRTVNEEKRWADYLFKDGSM 306 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEKNF-FETRVT 114 +GLN Y+++IANRR IGL+P++ NP PW ++ K ++N ET + Sbjct: 307 IGLNDRLLHNYVEWIANRRMKAIGLKPIYDIPAKNNPLPWTEHWLNSKGQQNAPQETEIE 366 Query: 115 EYQQGA 120 Y G Sbjct: 367 SYVVGG 372 >gi|33358114|pdb|1PIM|A Chain A, Dithionite Reduced E. Coli Ribonucleotide Reductase R2 Subunit, D84e Mutant gi|33358115|pdb|1PIM|B Chain B, Dithionite Reduced E. Coli Ribonucleotide Reductase R2 Subunit, D84e Mutant gi|33358116|pdb|1PIU|A Chain A, Oxidized Ribonucleotide Reductase R2-D84e Mutant Containing Oxo-Bridged Diferric Cluster gi|33358117|pdb|1PIU|B Chain B, Oxidized Ribonucleotide Reductase R2-D84e Mutant Containing Oxo-Bridged Diferric Cluster gi|42543285|pdb|1PIZ|A Chain A, Ribonucleotide Reductase R2 D84e Mutant Soaked With Ferrous Ions At Neutral Ph gi|42543286|pdb|1PIZ|B Chain B, Ribonucleotide Reductase R2 D84e Mutant Soaked With Ferrous Ions At Neutral Ph Length = 375 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F NP PW++ ++ + E V+ Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 356 YLVGQIDSEVDTD 368 >gi|331653669|ref|ZP_08354670.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli M718] gi|331048518|gb|EGI20594.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli M718] Length = 449 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 310 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 369 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 370 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 429 Query: 116 Y 116 Y Sbjct: 430 Y 430 >gi|110806205|ref|YP_689725.1| ribonucleotide-diphosphate reductase subunit beta [Shigella flexneri 5 str. 8401] gi|110615753|gb|ABF04420.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella flexneri 5 str. 8401] gi|281601680|gb|ADA74664.1| putative ribonucleotide reductase, beta subunit [Shigella flexneri 2002017] Length = 453 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 314 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 373 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 374 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 433 Query: 116 Y 116 Y Sbjct: 434 Y 434 >gi|42543287|pdb|1PJ0|A Chain A, Ribonucleotide Reductase R2-D84eW48F MUTANT SOAKED WITH Ferrous Ions At Neutral Ph gi|42543288|pdb|1PJ0|B Chain B, Ribonucleotide Reductase R2-D84eW48F MUTANT SOAKED WITH Ferrous Ions At Neutral Ph gi|42543289|pdb|1PJ1|A Chain A, Ribonucleotide Reductase R2-D84eW48F SOAKED WITH FERROUS Ions At Ph 5 gi|42543290|pdb|1PJ1|B Chain B, Ribonucleotide Reductase R2-D84eW48F SOAKED WITH FERROUS Ions At Ph 5 Length = 375 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F NP PW++ ++ + E V+ Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 356 YLVGQIDSEVDTD 368 >gi|325914792|ref|ZP_08177129.1| ribonucleotide reductase, beta subunit [Xanthomonas vesicatoria ATCC 35937] gi|325538985|gb|EGD10644.1| ribonucleotide reductase, beta subunit [Xanthomonas vesicatoria ATCC 35937] Length = 349 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I EN L + A LE + E + G G++ Sbjct: 221 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWTAEVL-DGIDGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++ Sbjct: 280 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 339 >gi|66770372|ref|YP_245134.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas campestris pv. campestris str. 8004] gi|188993572|ref|YP_001905582.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas campestris pv. campestris str. B100] gi|66575704|gb|AAY51114.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas campestris pv. campestris str. 8004] gi|167735332|emb|CAP53546.1| Ribonucleoside-diphosphate reductase beta chain [Xanthomonas campestris pv. campestris] Length = 347 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I EN L + A LE + E + G G++ Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWTAEVL-DGIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++ Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337 >gi|37526941|ref|NP_930285.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus luminescens subsp. laumondii TTO1] gi|36786374|emb|CAE15427.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotide reductase 1) (B2 protein) (R2 protein) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 376 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + KE +Q+ + +A E +A +G Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAKECEQQCYDLFVQAAEQEKEWADYLFSEGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLKLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|54309624|ref|YP_130644.1| ribonucleotide-diphosphate reductase subunit beta [Photobacterium profundum SS9] gi|46914062|emb|CAG20842.1| putative ribonucleoside-diphosphate reductase,beta subunit [Photobacterium profundum SS9] Length = 377 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+ + EA E +A G Sbjct: 237 RDEALHLTGTQHILNLLRGRHDDPEMADIAQECQQECFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101 +GLN QY+++I N R +GLE + +NP PW++ + Sbjct: 297 MIGLNKEILCQYVEYITNLRMKAVGLEQAYPGANQNPIPWINSWLS 342 >gi|87120532|ref|ZP_01076426.1| ribonucleotide-diphosphate reductase beta subunit [Marinomonas sp. MED121] gi|86164175|gb|EAQ65446.1| ribonucleotide-diphosphate reductase beta subunit [Marinomonas sp. MED121] Length = 377 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + KE + ++ + EA E +A G Sbjct: 238 RDEALHLTGTQHILNLMASGKDDPEMEDIAKECEDEAYQIFFEAAEQEKEWASYLFKDGS 297 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLNA QY+++I N R IGL P F+ NP PW++ ++ + E ++ Sbjct: 298 MIGLNAQILGQYVEYITNIRMQAIGLLPTFETKHNPIPWINAWLVSDNVQVAPQEAEISS 357 Query: 116 Y 116 Y Sbjct: 358 Y 358 >gi|227328222|ref|ZP_03832246.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 376 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFQTRTNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQIDSEISDD 369 >gi|56412825|ref|YP_149900.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197361758|ref|YP_002141394.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127082|gb|AAV76588.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093234|emb|CAR58679.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 376 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQIDSEVDTD 369 >gi|326783480|ref|YP_004324017.1| ribonucleotide reductase A subunit [Synechococcus phage Syn19] gi|310004983|gb|ADO99373.1| ribonucleotide reductase A subunit [Synechococcus phage Syn19] Length = 388 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVINQIKI-ENPH--LWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 RDES HL +++ + ++P L +E Q M E A+A+ G Sbjct: 248 RDESQHLVITQNILRKWSEGDDPEMKLIAQEEQSYVTEMFKRTVEEEKAWANYLFRDGSL 307 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEKNF-FETRVT 114 +GLN Y+++IANRR +G++P++ NP PW ++ K ++N ET + Sbjct: 308 IGLNDRLLYNYVEWIANRRMKAVGIKPIYDIPAKNNPLPWTEHWLNSKGQQNAPQETEIE 367 Query: 115 EYQQGA 120 Y G Sbjct: 368 SYVVGG 373 >gi|311278798|ref|YP_003941029.1| Ribonucleoside-diphosphate reductase [Enterobacter cloacae SCF1] gi|308747993|gb|ADO47745.1| Ribonucleoside-diphosphate reductase [Enterobacter cloacae SCF1] Length = 376 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|253687496|ref|YP_003016686.1| ribonucleotide reductase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754074|gb|ACT12150.1| ribonucleotide reductase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 376 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFQTRTNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQIDSEISDD 369 >gi|21233407|ref|NP_639324.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|21115247|gb|AAM43206.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 347 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++I I EN L + A LE + E + G G++ Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWTAEVL-DGIDGID 277 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++ Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337 >gi|109898789|ref|YP_662044.1| ribonucleotide-diphosphate reductase subunit beta [Pseudoalteromonas atlantica T6c] gi|109701070|gb|ABG40990.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Pseudoalteromonas atlantica T6c] Length = 376 Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 5/105 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++P + E+++++ + +A E +A G Sbjct: 237 RDENLHLTSTQHILNLWAKGKDDPEMAEIALEYKEEATNIFLDAVNQEKEWAEYLFQNGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101 +GLN QY++FIAN R IGL+ F NP PWM+ ++ Sbjct: 297 MIGLNKDILCQYVEFIANHRMSAIGLDQPFDIKNNPLPWMNNYLN 341 >gi|227114436|ref|ZP_03828092.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 376 Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFQTRTNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQIDSEISDD 369 >gi|94499220|ref|ZP_01305758.1| ribonucleotide-diphosphate reductase beta subunit [Oceanobacter sp. RED65] gi|94428852|gb|EAT13824.1| ribonucleotide-diphosphate reductase beta subunit [Oceanobacter sp. RED65] Length = 376 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 6/125 (4%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++ + ++P + E +++ + EA E +A G Sbjct: 237 RDEALHLTGTQHMMQIWALGKDDPEMGEIANECKKQVIEIFREAAQQEKDWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N+R IGL+ +F+ +NP PW++ ++ + E ++ Sbjct: 297 MIGLNKDILCQYVEYITNQRLGAIGLDNIFETRQNPIPWINAWLVSDNVQVAPQEAEISS 356 Query: 116 YQQGA 120 Y GA Sbjct: 357 YLVGA 361 >gi|332306884|ref|YP_004434735.1| Ribonucleoside-diphosphate reductase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174213|gb|AEE23467.1| Ribonucleoside-diphosphate reductase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 376 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 5/105 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++P + E++Q++ + +A E +A G Sbjct: 237 RDENLHLTSTQHILNLWAKGKDDPEMAEIAIEYKQQATDIFLDAVNQEKEWAEYLFQNGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101 +GLN QY++FIAN R IGL F NP PWM+ ++ Sbjct: 297 MIGLNKDILCQYVEFIANHRMSAIGLGQPFDIKNNPLPWMNNYLN 341 >gi|261822457|ref|YP_003260563.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium wasabiae WPP163] gi|261606470|gb|ACX88956.1| ribonucleotide reductase [Pectobacterium wasabiae WPP163] Length = 376 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFQTRTNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQIDSEISDD 369 >gi|205353394|ref|YP_002227195.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205273175|emb|CAR38137.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628485|gb|EGE34828.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 376 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQIDSEVDTD 369 >gi|89092731|ref|ZP_01165684.1| ribonucleotide-diphosphate reductase beta subunit [Oceanospirillum sp. MED92] gi|89083243|gb|EAR62462.1| ribonucleotide-diphosphate reductase beta subunit [Oceanospirillum sp. MED92] Length = 376 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P KE +Q + EA E +A +G Sbjct: 237 RDEALHLTGTQHMLNIMASGADDPDYKDIAKECEQDVYNIFKEAAQQEKDWAQYLFREGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLNA Y+++I N R + LE +F +NP PWM+ ++ + E ++ Sbjct: 297 MIGLNAQILSDYVEYITNVRMKALNLEEIFPARQNPLPWMNAWLVSDNVQVAPQEAEISS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|326783875|ref|YP_004324269.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM7] gi|310003887|gb|ADO98282.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM7] Length = 388 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVI-NQIKIENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 RDE+ HL +++ N + ++P + E + M A E +A G Sbjct: 248 RDENQHLVLTQNILKNWMNGDDPEMKQIADEERNNVIGMFRNAVEEEKEWAEYLFSGGSM 307 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEKNF-FETRVT 114 +GLN QY+++IAN+R +G +P++ NP PW I K + ET V Sbjct: 308 IGLNDKLLNQYVEWIANKRMKALGFDPIYDQPLRNNPLPWTQHWISSKGLQVAPQETEVE 367 Query: 115 EYQQGA 120 Y G Sbjct: 368 SYVVGG 373 >gi|16765605|ref|NP_461220.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62180851|ref|YP_217268.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161613001|ref|YP_001586966.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167549728|ref|ZP_02343487.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167992612|ref|ZP_02573709.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168237293|ref|ZP_02662351.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168242393|ref|ZP_02667325.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168261709|ref|ZP_02683682.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168466025|ref|ZP_02699895.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168817991|ref|ZP_02829991.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194442577|ref|YP_002041539.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449379|ref|YP_002046332.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194735273|ref|YP_002115349.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197247637|ref|YP_002147234.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262505|ref|ZP_03162579.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198242288|ref|YP_002216347.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200387602|ref|ZP_03214214.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204929071|ref|ZP_03220214.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|207857697|ref|YP_002244348.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213161593|ref|ZP_03347303.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|224583238|ref|YP_002637036.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|1172945|sp|P37427|RIR2_SALTY RecName: Full=Ribonucleoside-diphosphate reductase 1 subunit beta; AltName: Full=Protein B2; AltName: Full=Protein R2; AltName: Full=Ribonucleotide reductase 1 gi|510349|emb|CAA51453.1| nrdB [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16420817|gb|AAL21179.1| ribonucleoside-diphosphate reductase 1, beta subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62128484|gb|AAX66187.1| ribonucleoside-diphosphate reductase 1, beta subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161362365|gb|ABX66133.1| hypothetical protein SPAB_00707 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194401240|gb|ACF61462.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407683|gb|ACF67902.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194710775|gb|ACF89996.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195631367|gb|EDX49927.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197211340|gb|ACH48737.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240760|gb|EDY23380.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289678|gb|EDY29041.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197936804|gb|ACH74137.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199604700|gb|EDZ03245.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204321615|gb|EDZ06814.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205325266|gb|EDZ13105.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329222|gb|EDZ15986.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205338588|gb|EDZ25352.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205344845|gb|EDZ31609.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205349363|gb|EDZ35994.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709500|emb|CAR33844.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224467765|gb|ACN45595.1| ribonucleotide-diphosphate reductase beta subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261247486|emb|CBG25313.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994368|gb|ACY89253.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158836|emb|CBW18349.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913268|dbj|BAJ37242.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320086715|emb|CBY96487.1| ribonucleoside diphosphage reductase 1, beta subunit, B2 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321223022|gb|EFX48093.1| Ribonucleotide reductase of class Ia aerobic, beta subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322617030|gb|EFY13936.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617664|gb|EFY14563.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624706|gb|EFY21535.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630255|gb|EFY27025.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634436|gb|EFY31169.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322639146|gb|EFY35838.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640143|gb|EFY36809.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645769|gb|EFY42293.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651544|gb|EFY47919.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656105|gb|EFY52404.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659457|gb|EFY55704.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665919|gb|EFY62102.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669843|gb|EFY65984.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673828|gb|EFY69925.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678586|gb|EFY74642.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683618|gb|EFY79632.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687694|gb|EFY83664.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322715327|gb|EFZ06898.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323130608|gb|ADX18038.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323196209|gb|EFZ81366.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198377|gb|EFZ83479.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204185|gb|EFZ89196.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208571|gb|EFZ93510.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212337|gb|EFZ97160.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218256|gb|EGA02966.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222986|gb|EGA07335.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227421|gb|EGA11586.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232251|gb|EGA16354.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235716|gb|EGA19800.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323241124|gb|EGA25160.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244866|gb|EGA28868.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248577|gb|EGA32508.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251597|gb|EGA35465.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255474|gb|EGA39237.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263076|gb|EGA46622.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323268136|gb|EGA51613.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270771|gb|EGA54209.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326624097|gb|EGE30442.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332989211|gb|AEF08194.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 376 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQIDSEVDTD 369 >gi|227356095|ref|ZP_03840485.1| ribonucleoside-diphosphate reductase 1, beta subunit [Proteus mirabilis ATCC 29906] gi|227163740|gb|EEI48652.1| ribonucleoside-diphosphate reductase 1, beta subunit [Proteus mirabilis ATCC 29906] Length = 376 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E +Q+ + EA E +A +G Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEQECYDLFVEAAEQEKEWAEYLFSEGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ FK NP PW++ ++ + E V+ Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLKLPFKARSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +++ D Sbjct: 357 YLVGQIDSQVDTD 369 >gi|168229641|ref|ZP_02654699.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194471700|ref|ZP_03077684.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|238913487|ref|ZP_04657324.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|194458064|gb|EDX46903.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205335835|gb|EDZ22599.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 376 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQIDSEVDTD 369 >gi|326782198|ref|YP_004322599.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM1] gi|310004405|gb|ADO98798.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM1] Length = 395 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLW---TKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 RDES HL +I + + + +E + M A E A+A G Sbjct: 255 RDESQHLVLTQQIIKKWQDGDDEEMVRIAEEEKSNVLKMFKNAVEEEKAWASYLFKNGSM 314 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE--NPFPWMSEVIDLKKEKNF-FETRVT 114 +GLN QY++F ANRR IGL+P++ + NP PW ++ K ++N ET + Sbjct: 315 IGLNEKLLGQYVEFTANRRMKAIGLDPIYDISPRNNPLPWTQYWLNSKGQQNAPQETEIE 374 Query: 115 EYQQGA 120 Y G Sbjct: 375 SYVIGG 380 >gi|326783148|ref|YP_004323545.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM2] gi|310005566|gb|ADO99954.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM2] Length = 394 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLW---TKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 RDES HL +I + + + +E + M A E A+A G Sbjct: 254 RDESQHLVLTQQIIKKWQDGDDEEMVRIAEEEKPNVLKMFQNAVEEEKAWAQYLFKNGSM 313 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE--NPFPWMSEVIDLKKEKNF-FETRVT 114 +GLN QY++F ANRR IGL+P++ + NP PW ++ K ++N ET + Sbjct: 314 IGLNEKLLGQYVEFTANRRMKAIGLDPIYDISPRNNPLPWTQYWLNSKGQQNAPQETEIE 373 Query: 115 EYQQGA 120 Y G Sbjct: 374 SYVIGG 379 >gi|213646443|ref|ZP_03376496.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289824706|ref|ZP_06544205.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 240 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + +E +Q+ + +A E +A G Sbjct: 101 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 160 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 161 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 220 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 221 YLVGQIDSEVDTD 233 >gi|16761204|ref|NP_456821.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141101|ref|NP_804443.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|25285831|pir||AD0791 ribonucleoside-diphosphate reductase (EC 1.17.4.1) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503503|emb|CAD07510.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella enterica subsp. enterica serovar Typhi] gi|29136727|gb|AAO68292.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 376 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQIDSEVDTD 369 >gi|324020907|gb|EGB90126.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 117-3] Length = 420 Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 281 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 340 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 341 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 400 Query: 116 Y 116 Y Sbjct: 401 Y 401 >gi|152997008|ref|YP_001341843.1| ribonucleotide-diphosphate reductase subunit beta [Marinomonas sp. MWYL1] gi|150837932|gb|ABR71908.1| Ribonucleoside-diphosphate reductase [Marinomonas sp. MWYL1] Length = 377 Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + E Q + R + EA E +A G Sbjct: 238 RDEALHLTGTQHMLNLMASGKDDPEMAVIAAECQDEVRQIFIEAAEQEKEWATYLFKDGS 297 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLNA QY+++I N R +GLE F NP PW++ ++ + E ++ Sbjct: 298 MIGLNAQILGQYVEYITNVRMQAVGLETCFATKHNPIPWINAWLVSDNVQVAPQEAEISS 357 Query: 116 Y 116 Y Sbjct: 358 Y 358 >gi|197285594|ref|YP_002151466.1| ribonucleotide-diphosphate reductase subunit beta [Proteus mirabilis HI4320] gi|194683081|emb|CAR43612.1| ribonucleoside-diphosphate reductase 1, beta subunit [Proteus mirabilis HI4320] Length = 376 Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E +Q+ + EA E +A +G Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEQECYDLFVEAAEQEKEWAEYLFSEGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ FK NP PW++ ++ + E V+ Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLKLPFKARSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +++ D Sbjct: 357 YLVGQIDSQVDTD 369 >gi|290508492|ref|ZP_06547863.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella sp. 1_1_55] gi|289777886|gb|EFD85883.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella sp. 1_1_55] Length = 405 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + A E +A G Sbjct: 266 RDEALHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVLAAQQEKEWADYLFRDGS 325 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 326 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 385 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 386 YLVGQIDSEVDAD 398 >gi|90581239|ref|ZP_01237037.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio angustum S14] gi|90437610|gb|EAS62803.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio angustum S14] Length = 377 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E +Q+ + A E +A G Sbjct: 237 RDEALHLTGTQHILNLLRNGHDDPEMAEIAAECEQECFDIFKAAAEQEKEWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 101 +GLN QY+++I N R +GL P + T+NP PW++ + Sbjct: 297 MIGLNKQILCQYVEYITNLRMVAVGLRPAYDGATQNPIPWINSWLS 342 >gi|260772919|ref|ZP_05881835.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio metschnikovii CIP 69.14] gi|260612058|gb|EEX37261.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio metschnikovii CIP 69.14] Length = 377 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ +E +Q+ + EA E +A G Sbjct: 237 RDEALHLTGTQHMINLLRNGLDDFTFLQIAEECKQQCFDLFKEAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID 101 +GLN QY+++I N R +GLEP + T NP PW++ + Sbjct: 297 MIGLNRDILCQYVEYITNIRMQAVGLEPAYPKATSNPIPWINAWLS 342 >gi|326782458|ref|YP_004322858.1| ribonucleotide reductase A subunit [Synechococcus phage S-ShM2] gi|310003406|gb|ADO97803.1| ribonucleotide reductase A subunit [Synechococcus phage S-ShM2] Length = 386 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVINQIKI-ENPHLWTKEFQQK--SRTMLHEATLLEIAYAHETMPKG-F 57 RDES HL +++ + ++P + +++ M + E A+A G Sbjct: 246 RDESQHLVITQNILKNWRDGDDPEMQQIALEEEENVIKMFAKTVDEEKAWAEYLFKDGSM 305 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114 +GLN QY+++IANRR IGL+P++ NP PW ++ K ++N ET + Sbjct: 306 IGLNDRLLSQYVEWIANRRMKAIGLKPMYNVPAKSNPLPWTEHWLNSKGQQNAPQETEIE 365 Query: 115 EYQQGA 120 Y G Sbjct: 366 SYVIGG 371 >gi|238895770|ref|YP_002920506.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella pneumoniae NTUH-K2044] gi|238548088|dbj|BAH64439.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 396 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + A E +A G Sbjct: 257 RDEALHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVLAAQQEKEWADYLFRDGS 316 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 317 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 376 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 377 YLVGQIDSEVDAD 389 >gi|170019452|ref|YP_001724406.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli ATCC 8739] gi|187775748|ref|ZP_02798054.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4196] gi|188024880|ref|ZP_02774660.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4113] gi|189010171|ref|ZP_02805091.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4076] gi|189402101|ref|ZP_02779989.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4401] gi|189403050|ref|ZP_02792862.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4486] gi|189404930|ref|ZP_02812148.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC869] gi|189405663|ref|ZP_02823406.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC508] gi|208806716|ref|ZP_03249053.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4206] gi|208812585|ref|ZP_03253914.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4045] gi|208820390|ref|ZP_03260710.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4042] gi|209398142|ref|YP_002271641.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4115] gi|293415528|ref|ZP_06658171.1| ribonucleoside-diphosphate reductase [Escherichia coli B185] gi|300948933|ref|ZP_07162994.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 116-1] gi|300958921|ref|ZP_07171024.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 175-1] gi|307138893|ref|ZP_07498249.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli H736] gi|169754380|gb|ACA77079.1| Ribonucleoside-diphosphate reductase [Escherichia coli ATCC 8739] gi|187771218|gb|EDU35062.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4196] gi|188016038|gb|EDU54160.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4113] gi|189002108|gb|EDU71094.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4076] gi|189357709|gb|EDU76128.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4401] gi|189362845|gb|EDU81264.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4486] gi|189372811|gb|EDU91227.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC869] gi|189378868|gb|EDU97284.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC508] gi|208726517|gb|EDZ76118.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4206] gi|208733862|gb|EDZ82549.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4045] gi|208740513|gb|EDZ88195.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4042] gi|209159542|gb|ACI36975.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4115] gi|291433176|gb|EFF06155.1| ribonucleoside-diphosphate reductase [Escherichia coli B185] gi|300314424|gb|EFJ64208.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 175-1] gi|300451587|gb|EFK15207.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 116-1] gi|315136867|dbj|BAJ44026.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli DH1] gi|320192144|gb|EFW66789.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 str. EC1212] gi|320641061|gb|EFX10540.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 str. G5101] gi|320646450|gb|EFX15369.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H- str. 493-89] gi|320651547|gb|EFX19927.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H- str. H 2687] gi|320657299|gb|EFX25101.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320667818|gb|EFX34726.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 str. LSU-61] gi|323936632|gb|EGB32918.1| ribonucleotide reductase [Escherichia coli E1520] gi|323941071|gb|EGB37258.1| ribonucleotide reductase [Escherichia coli E482] gi|326344044|gb|EGD67805.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 str. 1044] Length = 389 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 369 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 370 YLVGQIDSEVDTD 382 >gi|332278613|ref|ZP_08391026.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9] gi|332100965|gb|EGJ04311.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9] Length = 420 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 281 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 340 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 341 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 400 Query: 116 Y 116 Y Sbjct: 401 Y 401 >gi|307171465|gb|EFN63309.1| Ribonucleoside-diphosphate reductase subunit M2 [Camponotus floridanus] Length = 343 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 41/84 (48%), Gaps = 7/84 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + H+ K ++ ++++ +A +E + + +P +G+N Sbjct: 243 RDEGLHCDFACLMFK-------HIVQKPSFERVKSIIMDAVEIEQEFLTQALPVQLIGMN 295 Query: 62 APSCEQYMQFIANRRCHQIGLEPL 85 Y++F+A+R +G E + Sbjct: 296 CTLMCSYIEFVADRLFVALGFEKV 319 >gi|118602534|ref|YP_903749.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567473|gb|ABL02278.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 378 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 6/125 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + L +KE Q + TM EA E +A G Sbjct: 237 RDEALHLTGTQHMLNLMSSGKDDLDMQKISKECQDEVITMFREACEQEKDWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115 +GLNA +QY+++I N R + L +F NP PW++ +D + ET +T Sbjct: 297 MIGLNAQILKQYLEYITNVRMKALNLSLIFDECTNPLPWINHWLDSDNVQVAPQETEITS 356 Query: 116 YQQGA 120 Y A Sbjct: 357 YLVSA 361 >gi|324112772|gb|EGC06748.1| ribonucleotide reductase [Escherichia fergusonii B253] Length = 389 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 369 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 370 YLVGQIDSEVDTD 382 >gi|330829606|ref|YP_004392558.1| ribonucleoside diphosphate reductase 1 subunit beta, ferritin-like protein [Aeromonas veronii B565] gi|328804742|gb|AEB49941.1| Ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like protein [Aeromonas veronii B565] Length = 393 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 7/122 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E +Q + EA + E +A G Sbjct: 253 RDEALHLTGTQHMLNLMRTGQDDPEMAEIAAECEQACFEIFKEAAIQEKEWAEYLFQDGS 312 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS-EVIDLKKEKNFFETRVT 114 +GLN QY+++I N R +GL+P F T+ NP PW++ + + E V+ Sbjct: 313 MIGLNKDILCQYVEYITNLRMSAVGLQPAFAGTKQNPIPWINTWLSSDNVQVAPQEVEVS 372 Query: 115 EY 116 Y Sbjct: 373 SY 374 >gi|291283479|ref|YP_003500297.1| Ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Escherichia coli O55:H7 str. CB9615] gi|290763352|gb|ADD57313.1| Ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Escherichia coli O55:H7 str. CB9615] Length = 389 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 369 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 370 YLVGQIDSEVDTD 382 >gi|268591162|ref|ZP_06125383.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia rettgeri DSM 1131] gi|291313388|gb|EFE53841.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia rettgeri DSM 1131] Length = 378 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E +Q+ + +A E +A +G Sbjct: 239 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEQECYDLFVQAAEQEKEWADYLFSEGS 298 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 299 MIGLNKDILCQYVEYITNIRMQAVGLKLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 358 Query: 116 Y---QQGAELKWD 125 Y Q +++ D Sbjct: 359 YLVGQIDSQVDTD 371 >gi|304414248|ref|ZP_07395616.1| ribonucleotide reductase beta subunit [Candidatus Regiella insecticola LSR1] gi|304283462|gb|EFL91858.1| ribonucleotide reductase beta subunit [Candidatus Regiella insecticola LSR1] Length = 381 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 5/105 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ ++P + KE Q + +A E +A G Sbjct: 242 RDEALHLTGTQHIINLMREGTDDPEMAEIAKECQNNCFELFKKAAEQEKEWATYLFRDGS 301 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101 +GLN QY+++I N R +GL FK NP PW++ + Sbjct: 302 MIGLNKDILCQYIEYITNIRMQAVGLALPFKIRSNPIPWINAWLS 346 >gi|189403970|ref|ZP_02786340.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4501] gi|217327202|ref|ZP_03443285.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. TW14588] gi|301026864|ref|ZP_07190263.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 196-1] gi|301647674|ref|ZP_07247468.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 146-1] gi|189368305|gb|EDU86721.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4501] gi|217319569|gb|EEC27994.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. TW14588] gi|260448673|gb|ACX39095.1| Ribonucleoside-diphosphate reductase [Escherichia coli DH1] gi|299879524|gb|EFI87735.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 196-1] gi|301074204|gb|EFK89010.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 146-1] gi|326339582|gb|EGD63393.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 str. 1125] Length = 393 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 254 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 313 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 314 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 373 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 374 YLVGQIDSEVDTD 386 >gi|40889712|pdb|1RSR|A Chain A, Azide Complex Of The Diferrous F208a Mutant R2 Subunit Of Ribonucleotide Reductase gi|40889713|pdb|1RSR|B Chain B, Azide Complex Of The Diferrous F208a Mutant R2 Subunit Of Ribonucleotide Reductase Length = 375 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 356 YLVGQIDSEVDTD 368 >gi|304445703|pdb|2XOF|A Chain A, Ribonucleotide Reductase Y122no2y Modified R2 Subunit Of E. Coli gi|304445704|pdb|2XOF|B Chain B, Ribonucleotide Reductase Y122no2y Modified R2 Subunit Of E. Coli Length = 375 Score = 105 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 356 YLVGQIDSEVDTD 368 >gi|93005945|ref|YP_580382.1| ribonucleotide-diphosphate reductase subunit beta [Psychrobacter cryohalolentis K5] gi|92393623|gb|ABE74898.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Psychrobacter cryohalolentis K5] Length = 377 Score = 105 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 7/122 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++I ++P + KE ++S + +A E +A G Sbjct: 237 RDEALHLTGTQHILNLMRIGRDDPEMVDIAKECYEESIEIFRKAAEQEKEWAGYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS-EVIDLKKEKNFFETRVT 114 +GLN QY+++I N R +GL F ++ NP PW++ + + ET ++ Sbjct: 297 MIGLNKDILCQYIEYITNLRMEAVGLPVAFPNSKSNPIPWINTWLSSDNVQVAPQETEIS 356 Query: 115 EY 116 Y Sbjct: 357 SY 358 >gi|61680624|pdb|1YFD|A Chain A, Crystal Structure Of The Y122h Mutant Of Ribonucleotide Reductase R2 Protein From E. Coli gi|61680625|pdb|1YFD|B Chain B, Crystal Structure Of The Y122h Mutant Of Ribonucleotide Reductase R2 Protein From E. Coli Length = 375 Score = 105 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 356 YLVGQIDSEVDTD 368 >gi|331663742|ref|ZP_08364652.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli TA143] gi|323977567|gb|EGB72653.1| ribonucleotide reductase [Escherichia coli TW10509] gi|331059541|gb|EGI31518.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli TA143] Length = 389 Score = 105 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 369 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 370 YLVGQIDSEVDTD 382 >gi|326567429|gb|EGE17544.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella catarrhalis BC1] Length = 361 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 5/122 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FV 58 RDE+LHLN ++ + E+ T+ + + + A E A+ G + Sbjct: 225 RDEALHLNGTQHILTLLVKEHEDYQTITQTCKDEIYDIFESAYEQERAWIDYLFKDGSMI 284 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTEYQ 117 GLN QY+Q+I + R IGLEP+F T+NP PW++ + + ET +T Y Sbjct: 285 GLNKEILTQYLQYITDIRMSAIGLEPVFN-TKNPIPWINNWLSSDNVQVAPQETEITSYV 343 Query: 118 QG 119 G Sbjct: 344 VG 345 >gi|1942079|pdb|1XIK|A Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain gi|1942080|pdb|1XIK|B Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain gi|15825694|pdb|1JPR|A Chain A, Mn Substituted Ribonucleotide Reductase R2 From E. Coli Oxidized By Nitric Oxide gi|15825695|pdb|1JPR|B Chain B, Mn Substituted Ribonucleotide Reductase R2 From E. Coli Oxidized By Nitric Oxide gi|15826771|pdb|1JQC|A Chain A, Mn Substituted Ribonucleotide Reductase R2 From E. Coli Oxidized By Hydrogen Peroxide And Hydroxylamine gi|15826772|pdb|1JQC|B Chain B, Mn Substituted Ribonucleotide Reductase R2 From E. Coli Oxidized By Hydrogen Peroxide And Hydroxylamine gi|29726528|pdb|1MXR|A Chain A, High Resolution Structure Of Ribonucleotide Reductase R2 From E. Coli In Its Oxidised (Met) Form gi|29726529|pdb|1MXR|B Chain B, High Resolution Structure Of Ribonucleotide Reductase R2 From E. Coli In Its Oxidised (Met) Form Length = 375 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 356 YLVGQIDSEVDTD 368 >gi|326564074|gb|EGE14316.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella catarrhalis 103P14B1] gi|326570555|gb|EGE20595.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella catarrhalis BC8] gi|326573198|gb|EGE23167.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella catarrhalis CO72] Length = 361 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 5/122 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FV 58 RDE+LHLN ++ + E+ T+ + + + A E A+ G + Sbjct: 225 RDEALHLNGTQHILTLLVKEHEDYQTITQTCKDEIYDIFESAYEQERAWIDYLFKDGSMI 284 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTEYQ 117 GLN QY+Q+I + R IGLEP+F T+NP PW++ + + ET +T Y Sbjct: 285 GLNKEILTQYLQYITDIRMSAIGLEPVFN-TKNPIPWINNWLSSDNVQVAPQETEITSYV 343 Query: 118 QG 119 G Sbjct: 344 VG 345 >gi|300897697|ref|ZP_07116095.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 198-1] gi|301022393|ref|ZP_07186277.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 69-1] gi|331683911|ref|ZP_08384507.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli H299] gi|300358575|gb|EFJ74445.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 198-1] gi|300397543|gb|EFJ81081.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 69-1] gi|323967677|gb|EGB63089.1| ribonucleotide reductase [Escherichia coli M863] gi|331078863|gb|EGI50065.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli H299] Length = 393 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 254 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 313 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 314 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 373 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 374 YLVGQIDSEVDTD 386 >gi|161617990|ref|YP_001595470.1| ribonucleotide reductase beta subunit [Enterobacteria phage phiEcoM-GJ1] gi|150416409|gb|ABR68787.1| ribonucleotide reductase beta subunit [Enterobacteria phage phiEcoM-GJ1] Length = 372 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 5/105 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + E +Q+ + + +A E +A G Sbjct: 233 RDEALHLTGTQHMLNLLASGKDDPEMGEIAAECRQECQKLFEDAAQQEKDWADYLFKDGS 292 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101 +GLN Y+++I N R +GL+ FK NP PW++ ++ Sbjct: 293 MIGLNKQILCGYVEYITNIRMQAVGLDAPFKGATNPIPWINAWLN 337 >gi|320175005|gb|EFW50120.1| ribonucleotide-diphosphate reductase subunit beta [Shigella dysenteriae CDC 74-1112] Length = 376 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQIDSEVDTD 369 >gi|157144813|ref|YP_001452132.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter koseri ATCC BAA-895] gi|157082018|gb|ABV11696.1| hypothetical protein CKO_00540 [Citrobacter koseri ATCC BAA-895] Length = 376 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ I++P + +E +Q + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGIDDPEMAEIAEESKQACYDLFVQAAQQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GLE F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLELPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQIDSEVDTD 369 >gi|15802782|ref|NP_288809.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 EDL933] gi|15832372|ref|NP_311145.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 str. Sakai] gi|16130170|ref|NP_416738.1| ribonucleoside-diphosphate reductase 1, beta subunit, ferritin-like protein [Escherichia coli str. K-12 substr. MG1655] gi|82544520|ref|YP_408467.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii Sb227] gi|82777644|ref|YP_403993.1| ribonucleotide-diphosphate reductase subunit beta [Shigella dysenteriae Sd197] gi|89109052|ref|AP_002832.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Escherichia coli str. K-12 substr. W3110] gi|157161718|ref|YP_001459036.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli HS] gi|170081853|ref|YP_001731173.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like protein [Escherichia coli str. K-12 substr. DH10B] gi|187731010|ref|YP_001881065.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii CDC 3083-94] gi|188495860|ref|ZP_03003130.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli 53638] gi|195935609|ref|ZP_03080991.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 str. EC4024] gi|218548311|ref|YP_002382102.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia fergusonii ATCC 35469] gi|218705765|ref|YP_002413284.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli UMN026] gi|238901409|ref|YP_002927205.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like protein [Escherichia coli BW2952] gi|254794126|ref|YP_003078963.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 str. TW14359] gi|256022083|ref|ZP_05435948.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp. 4_1_40B] gi|261223312|ref|ZP_05937593.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 str. FRIK2000] gi|261259138|ref|ZP_05951671.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 str. FRIK966] gi|293405702|ref|ZP_06649694.1| nrdB [Escherichia coli FVEC1412] gi|293410599|ref|ZP_06654175.1| ribonucleoside-diphosphate reductase [Escherichia coli B354] gi|298381383|ref|ZP_06990982.1| nrdB [Escherichia coli FVEC1302] gi|309785072|ref|ZP_07679705.1| ribonucleoside-diphosphate reductase 1, subunit beta [Shigella dysenteriae 1617] gi|312973510|ref|ZP_07787682.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia coli 1827-70] gi|57014104|sp|P69924|RIR2_ECOLI RecName: Full=Ribonucleoside-diphosphate reductase 1 subunit beta; AltName: Full=Protein B2; AltName: Full=Protein R2; AltName: Full=Ribonucleotide reductase 1 gi|57014105|sp|P69925|RIR2_ECO57 RecName: Full=Ribonucleoside-diphosphate reductase 1 subunit beta; AltName: Full=Protein B2; AltName: Full=Protein R2; AltName: Full=Ribonucleotide reductase 1 gi|12516573|gb|AAG57364.1|AE005456_1 ribonucleoside diphosphage reductase 1, beta subunit, B2 [Escherichia coli O157:H7 str. EDL933] gi|146967|gb|AAA24224.1| ribonucleoside diphosphate reductase B2 subunit precursor [Escherichia coli] gi|1788567|gb|AAC75295.1| ribonucleoside-diphosphate reductase 1, beta subunit, ferritin-like protein [Escherichia coli str. K-12 substr. MG1655] gi|1799582|dbj|BAA16054.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Escherichia coli str. K12 substr. W3110] gi|13362587|dbj|BAB36541.1| ribonucleoside-diphosphate reductase 1 beta subunit [Escherichia coli O157:H7 str. Sakai] gi|81241792|gb|ABB62502.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella dysenteriae Sd197] gi|81245931|gb|ABB66639.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella boydii Sb227] gi|157067398|gb|ABV06653.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli HS] gi|169889688|gb|ACB03395.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like protein [Escherichia coli str. K-12 substr. DH10B] gi|187428002|gb|ACD07276.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella boydii CDC 3083-94] gi|188491059|gb|EDU66162.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli 53638] gi|218355852|emb|CAQ88465.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Escherichia fergusonii ATCC 35469] gi|218432862|emb|CAR13756.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Escherichia coli UMN026] gi|238863475|gb|ACR65473.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like protein [Escherichia coli BW2952] gi|254593526|gb|ACT72887.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like protein [Escherichia coli O157:H7 str. TW14359] gi|284922226|emb|CBG35308.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli 042] gi|291427910|gb|EFF00937.1| nrdB [Escherichia coli FVEC1412] gi|291471067|gb|EFF13551.1| ribonucleoside-diphosphate reductase [Escherichia coli B354] gi|298278825|gb|EFI20339.1| nrdB [Escherichia coli FVEC1302] gi|308927442|gb|EFP72916.1| ribonucleoside-diphosphate reductase 1, subunit beta [Shigella dysenteriae 1617] gi|309702545|emb|CBJ01872.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli ETEC H10407] gi|310332105|gb|EFP99340.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia coli 1827-70] gi|315615496|gb|EFU96128.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia coli 3431] gi|320184866|gb|EFW59654.1| ribonucleotide-diphosphate reductase subunit beta [Shigella flexneri CDC 796-83] gi|320663001|gb|EFX30318.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O55:H7 str. USDA 5905] gi|327252504|gb|EGE64163.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia coli STEC_7v] gi|332094036|gb|EGI99088.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella boydii 3594-74] gi|332344015|gb|AEE57349.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli UMNK88] Length = 376 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQIDSEVDTD 369 >gi|317048919|ref|YP_004116567.1| ribonucleoside-diphosphate reductase [Pantoea sp. At-9b] gi|316950536|gb|ADU70011.1| Ribonucleoside-diphosphate reductase [Pantoea sp. At-9b] Length = 376 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E + + + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRTGEDDPEMKEIAAECRDECYDLFKKAAEQEKEWAEYLFSGGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW+ S ++ + E V+ Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLDLPFQTRSNPIPWINSWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|117624429|ref|YP_853342.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli APEC O1] gi|237704711|ref|ZP_04535192.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp. 3_2_53FAA] gi|115513553|gb|ABJ01628.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli APEC O1] gi|226901077|gb|EEH87336.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp. 3_2_53FAA] gi|323952030|gb|EGB47904.1| ribonucleotide reductase [Escherichia coli H252] gi|323956004|gb|EGB51757.1| ribonucleotide reductase [Escherichia coli H263] Length = 420 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 281 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 340 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 341 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 400 Query: 116 Y 116 Y Sbjct: 401 Y 401 >gi|193068232|ref|ZP_03049196.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli E110019] gi|300903617|ref|ZP_07121535.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 84-1] gi|300926340|ref|ZP_07142140.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 182-1] gi|301328725|ref|ZP_07221778.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 78-1] gi|30041924|gb|AAP17650.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella flexneri 2a str. 2457T] gi|56383622|gb|AAN43832.2| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella flexneri 2a str. 301] gi|192958511|gb|EDV88950.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli E110019] gi|300404353|gb|EFJ87891.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 84-1] gi|300417617|gb|EFK00928.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 182-1] gi|300844873|gb|EFK72633.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 78-1] gi|315255170|gb|EFU35138.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 85-1] Length = 389 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 369 Query: 116 Y 116 Y Sbjct: 370 Y 370 >gi|71065825|ref|YP_264552.1| ribonucleotide-diphosphate reductase subunit beta [Psychrobacter arcticus 273-4] gi|71038810|gb|AAZ19118.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Psychrobacter arcticus 273-4] Length = 377 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 7/122 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++I ++P + KE ++S + +A E +A G Sbjct: 237 RDEALHLTGTQHILNLMRIGRDDPEMVDIAKECYEESIEIFRKAAEQEKEWAGYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS-EVIDLKKEKNFFETRVT 114 +GLN QY+++I N R +GL F ++ NP PW++ + + ET ++ Sbjct: 297 MIGLNKDILCQYIEYITNLRMEAVGLPVAFPKSKSNPIPWINTWLSSDNVQVAPQETEIS 356 Query: 115 EY 116 Y Sbjct: 357 SY 358 >gi|300936793|ref|ZP_07151685.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 21-1] gi|300458078|gb|EFK21571.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 21-1] Length = 405 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 266 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 325 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 326 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 385 Query: 116 Y 116 Y Sbjct: 386 Y 386 >gi|145298925|ref|YP_001141766.1| ribonucleotide-diphosphate reductase subunit beta [Aeromonas salmonicida subsp. salmonicida A449] gi|142851697|gb|ABO90018.1| ribonucleoside-diphosphate reductase, beta subunit [Aeromonas salmonicida subsp. salmonicida A449] Length = 377 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 7/122 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + + E +Q + EA + E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRTGQDDPEMAEISAECEQACFEIFKEAAIQEKEWAEYLFQDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS-EVIDLKKEKNFFETRVT 114 +GLN QY+++I N R + +GL+P F + NP PW++ + + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNLRMNAVGLQPAFAGAKQNPIPWINTWLSSDNVQVAPQEVEVS 356 Query: 115 EY 116 Y Sbjct: 357 SY 358 >gi|194427189|ref|ZP_03059740.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli B171] gi|194436109|ref|ZP_03068211.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli 101-1] gi|300918603|ref|ZP_07135191.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 115-1] gi|300931418|ref|ZP_07146747.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 187-1] gi|301303305|ref|ZP_07209430.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 124-1] gi|194414810|gb|EDX31081.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli B171] gi|194424837|gb|EDX40822.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli 101-1] gi|300414255|gb|EFJ97565.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 115-1] gi|300460788|gb|EFK24281.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 187-1] gi|300841479|gb|EFK69239.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 124-1] gi|323961541|gb|EGB57149.1| ribonucleotide reductase [Escherichia coli H489] gi|323973062|gb|EGB68256.1| ribonucleotide reductase [Escherichia coli TA007] Length = 393 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 254 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 313 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 314 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 373 Query: 116 Y 116 Y Sbjct: 374 Y 374 >gi|42543295|pdb|1PM2|A Chain A, Crystal Structure Of Manganese Substituted R2-D84e (D84e Mutant Of The R2 Subunit Of E. Coli Ribonucleotide Reductase) gi|42543296|pdb|1PM2|B Chain B, Crystal Structure Of Manganese Substituted R2-D84e (D84e Mutant Of The R2 Subunit Of E. Coli Ribonucleotide Reductase) Length = 339 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 +GLN QY+++I N R +GL+ F NP PW++ + Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWINTWL 339 >gi|331658316|ref|ZP_08359278.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli TA206] gi|307626227|gb|ADN70531.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli UM146] gi|331056564|gb|EGI28573.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli TA206] Length = 389 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 369 Query: 116 Y 116 Y Sbjct: 370 Y 370 >gi|229505158|ref|ZP_04394668.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae BX 330286] gi|229511170|ref|ZP_04400649.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae B33] gi|229515628|ref|ZP_04405087.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae TMA 21] gi|229518289|ref|ZP_04407733.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae RC9] gi|229521368|ref|ZP_04410787.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae TM 11079-80] gi|229525854|ref|ZP_04415259.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae bv. albensis VL426] gi|229529665|ref|ZP_04419055.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae 12129(1)] gi|229608178|ref|YP_002878826.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio cholerae MJ-1236] gi|229333439|gb|EEN98925.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae 12129(1)] gi|229339435|gb|EEO04452.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae bv. albensis VL426] gi|229341466|gb|EEO06469.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae TM 11079-80] gi|229345004|gb|EEO09978.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae RC9] gi|229347397|gb|EEO12357.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae TMA 21] gi|229351135|gb|EEO16076.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae B33] gi|229357381|gb|EEO22298.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae BX 330286] gi|229370833|gb|ACQ61256.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae MJ-1236] Length = 381 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +E +Q+S + EA E +A G Sbjct: 241 RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAEYLFKDGS 300 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID 101 +GLN QY+++I N R +GLEP + T NP PW++ + Sbjct: 301 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWINAWLS 346 >gi|332093862|gb|EGI98916.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella boydii 5216-82] Length = 376 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|262402402|ref|ZP_06078963.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio sp. RC586] gi|262351184|gb|EEZ00317.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio sp. RC586] Length = 360 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +E +Q+S + EA E +A G Sbjct: 220 RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAAYLFKDGS 279 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID 101 +GLN QY+++I N R +GLEP + T NP PW++ + Sbjct: 280 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPTATTNPIPWINAWLS 325 >gi|170682190|ref|YP_001744431.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli SMS-3-5] gi|170519908|gb|ACB18086.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli SMS-3-5] gi|315285847|gb|EFU45287.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 110-3] gi|315298059|gb|EFU57328.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 16-3] Length = 393 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 254 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 313 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 314 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 373 Query: 116 Y 116 Y Sbjct: 374 Y 374 >gi|161582009|ref|NP_230900.2| ribonucleotide-diphosphate reductase subunit beta [Vibrio cholerae O1 biovar El Tor str. N16961] gi|255745652|ref|ZP_05419600.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholera CIRS 101] gi|262159072|ref|ZP_06030184.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae INDRE 91/1] gi|262169430|ref|ZP_06037122.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae RC27] gi|262191406|ref|ZP_06049594.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae CT 5369-93] gi|255736727|gb|EET92124.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholera CIRS 101] gi|262022243|gb|EEY40952.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae RC27] gi|262029257|gb|EEY47909.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae INDRE 91/1] gi|262032695|gb|EEY51245.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio cholerae CT 5369-93] gi|327483944|gb|AEA78351.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Vibrio cholerae LMA3894-4] Length = 377 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +E +Q+S + EA E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID 101 +GLN QY+++I N R +GLEP + T NP PW++ + Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWINAWLS 342 >gi|121590730|ref|ZP_01678061.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae 2740-80] gi|147674333|ref|YP_001216820.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio cholerae O395] gi|153212320|ref|ZP_01948108.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae 1587] gi|153801907|ref|ZP_01956493.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae MZO-3] gi|153823603|ref|ZP_01976270.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae B33] gi|153827294|ref|ZP_01979961.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae MZO-2] gi|153829732|ref|ZP_01982399.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae 623-39] gi|227081427|ref|YP_002809978.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae M66-2] gi|254291706|ref|ZP_04962493.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae AM-19226] gi|254848379|ref|ZP_05237729.1| ribonucleoside-diphosphate reductase [Vibrio cholerae MO10] gi|297578847|ref|ZP_06940775.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio cholerae RC385] gi|298498653|ref|ZP_07008460.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae MAK 757] gi|9655738|gb|AAF94414.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547411|gb|EAX57522.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae 2740-80] gi|124116698|gb|EAY35518.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae 1587] gi|124122552|gb|EAY41295.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae MZO-3] gi|126518882|gb|EAZ76105.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae B33] gi|146316216|gb|ABQ20755.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae O395] gi|148874766|gb|EDL72901.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae 623-39] gi|149738785|gb|EDM53127.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae MZO-2] gi|150422390|gb|EDN14350.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae AM-19226] gi|227009315|gb|ACP05527.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae M66-2] gi|227013172|gb|ACP09382.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae O395] gi|254844084|gb|EET22498.1| ribonucleoside-diphosphate reductase [Vibrio cholerae MO10] gi|297536441|gb|EFH75274.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio cholerae RC385] gi|297542986|gb|EFH79036.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae MAK 757] Length = 389 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +E +Q+S + EA E +A G Sbjct: 249 RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAEYLFKDGS 308 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID 101 +GLN QY+++I N R +GLEP + T NP PW++ + Sbjct: 309 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWINAWLS 354 >gi|297265423|ref|XP_001091447.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Macaca mulatta] Length = 704 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 2/66 (3%) Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 +G+N +QY++F+A+R ++G +F+ ENPF +M E I L+ + NFFE RV EYQ Sbjct: 628 IGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQ 685 Query: 118 QGAELK 123 + + Sbjct: 686 RMGVMS 691 >gi|259907948|ref|YP_002648304.1| ribonucleotide-diphosphate reductase subunit beta [Erwinia pyrifoliae Ep1/96] gi|224963570|emb|CAX55060.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia pyrifoliae Ep1/96] gi|283477829|emb|CAY73745.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia pyrifoliae DSM 12163] gi|310768143|gb|ADP13093.1| ribonucleotide-diphosphate reductase subunit beta [Erwinia sp. Ejp617] Length = 376 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + KE +Q+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAKECRQECYDLFVLAAEQEKEWAEYLFSGGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R + +GL+ FK NP PW+ S ++ + E V+ Sbjct: 297 MIGLNKDILCQYIEYITNIRMNAVGLDLPFKTRSNPIPWINSWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|188533366|ref|YP_001907163.1| ribonucleotide-diphosphate reductase subunit beta [Erwinia tasmaniensis Et1/99] gi|188028408|emb|CAO96269.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia tasmaniensis Et1/99] Length = 376 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + KE +Q+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAKECRQECYDLFVLAAEQEKEWAEYLFSGGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R + +GL+ FK NP PW+ S ++ + E V+ Sbjct: 297 MIGLNKDILCQYIEYITNIRMNAVGLDLPFKTRSNPIPWINSWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|218690398|ref|YP_002398610.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli ED1a] gi|218427962|emb|CAR08882.2| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Escherichia coli ED1a] Length = 376 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|26248623|ref|NP_754663.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli CFT073] gi|74312755|ref|YP_311174.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sonnei Ss046] gi|91211528|ref|YP_541514.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli UTI89] gi|110642443|ref|YP_670173.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli 536] gi|157157492|ref|YP_001463584.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli E24377A] gi|161485800|ref|NP_708125.3| ribonucleotide-diphosphate reductase subunit beta [Shigella flexneri 2a str. 301] gi|161486465|ref|NP_837840.2| ribonucleotide-diphosphate reductase subunit beta [Shigella flexneri 2a str. 2457T] gi|191166513|ref|ZP_03028343.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli B7A] gi|191170278|ref|ZP_03031832.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli F11] gi|194433322|ref|ZP_03065602.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella dysenteriae 1012] gi|209919687|ref|YP_002293771.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli SE11] gi|215487452|ref|YP_002329883.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O127:H6 str. E2348/69] gi|218554798|ref|YP_002387711.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli IAI1] gi|218559152|ref|YP_002392065.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli S88] gi|218695841|ref|YP_002403508.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli 55989] gi|218700706|ref|YP_002408335.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli IAI39] gi|227887293|ref|ZP_04005098.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli 83972] gi|253772842|ref|YP_003035673.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162246|ref|YP_003045354.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli B str. REL606] gi|256017603|ref|ZP_05431468.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9] gi|260844831|ref|YP_003222609.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia coli O103:H2 str. 12009] gi|260856285|ref|YP_003230176.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia coli O26:H11 str. 11368] gi|260868965|ref|YP_003235367.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia coli O111:H- str. 11128] gi|293446578|ref|ZP_06663000.1| ribonucleoside-diphosphate reductase [Escherichia coli B088] gi|300818165|ref|ZP_07098377.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 107-1] gi|300822109|ref|ZP_07102251.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 119-7] gi|300981251|ref|ZP_07175428.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 200-1] gi|300983269|ref|ZP_07176508.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 45-1] gi|301048988|ref|ZP_07195975.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 185-1] gi|306814652|ref|ZP_07448814.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli NC101] gi|307311198|ref|ZP_07590842.1| ribonucleotide reductase [Escherichia coli W] gi|309793115|ref|ZP_07687543.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 145-7] gi|331647890|ref|ZP_08348982.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli M605] gi|331668939|ref|ZP_08369787.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli TA271] gi|331678186|ref|ZP_08378861.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli H591] gi|26109028|gb|AAN81231.1|AE016763_190 Ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli CFT073] gi|73856232|gb|AAZ88939.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella sonnei Ss046] gi|91073102|gb|ABE07983.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli UTI89] gi|110344035|gb|ABG70272.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli 536] gi|157079522|gb|ABV19230.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli E24377A] gi|190903473|gb|EDV63192.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli B7A] gi|190909794|gb|EDV69379.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli F11] gi|194418416|gb|EDX34505.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella dysenteriae 1012] gi|209912946|dbj|BAG78020.1| ribonucleoside diphosphate reductase beta subunit [Escherichia coli SE11] gi|215265524|emb|CAS09927.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Escherichia coli O127:H6 str. E2348/69] gi|218352573|emb|CAU98352.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Escherichia coli 55989] gi|218361566|emb|CAQ99157.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Escherichia coli IAI1] gi|218365921|emb|CAR03663.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Escherichia coli S88] gi|218370692|emb|CAR18503.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Escherichia coli IAI39] gi|222033996|emb|CAP76737.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia coli LF82] gi|227835643|gb|EEJ46109.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli 83972] gi|242377869|emb|CAQ32637.1| nrdB, subunit of B2 protein and GDP reductase [multifunctional] [Escherichia coli BL21(DE3)] gi|253323886|gb|ACT28488.1| ribonucleotide reductase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974147|gb|ACT39818.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli B str. REL606] gi|253978314|gb|ACT43984.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli BL21(DE3)] gi|257754934|dbj|BAI26436.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia coli O26:H11 str. 11368] gi|257759978|dbj|BAI31475.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia coli O103:H2 str. 12009] gi|257765321|dbj|BAI36816.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia coli O111:H- str. 11128] gi|281179326|dbj|BAI55656.1| ribonucleoside diphosphate reductase beta subunit [Escherichia coli SE15] gi|291323408|gb|EFE62836.1| ribonucleoside-diphosphate reductase [Escherichia coli B088] gi|294490302|gb|ADE89058.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli IHE3034] gi|300299180|gb|EFJ55565.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 185-1] gi|300307615|gb|EFJ62135.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 200-1] gi|300408603|gb|EFJ92141.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 45-1] gi|300525239|gb|EFK46308.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 119-7] gi|300529309|gb|EFK50371.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 107-1] gi|305852046|gb|EFM52498.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli NC101] gi|306908704|gb|EFN39201.1| ribonucleotide reductase [Escherichia coli W] gi|307554301|gb|ADN47076.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like protein [Escherichia coli ABU 83972] gi|308123401|gb|EFO60663.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 145-7] gi|312946856|gb|ADR27683.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O83:H1 str. NRG 857C] gi|313651060|gb|EFS15459.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella flexneri 2a str. 2457T] gi|315061535|gb|ADT75862.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Escherichia coli W] gi|315292180|gb|EFU51532.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 153-1] gi|320178793|gb|EFW53756.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii ATCC 9905] gi|320196104|gb|EFW70728.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli WV_060327] gi|320199830|gb|EFW74419.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli EC4100B] gi|323156512|gb|EFZ42666.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia coli EPECa14] gi|323161696|gb|EFZ47579.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia coli E128010] gi|323168602|gb|EFZ54282.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella sonnei 53G] gi|323171914|gb|EFZ57558.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia coli LT-68] gi|323176838|gb|EFZ62428.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia coli 1180] gi|323184146|gb|EFZ69523.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia coli 1357] gi|323188037|gb|EFZ73332.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia coli RN587/1] gi|323377884|gb|ADX50152.1| Ribonucleoside-diphosphate reductase [Escherichia coli KO11] gi|324006608|gb|EGB75827.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 57-2] gi|324013118|gb|EGB82337.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 60-1] gi|324117882|gb|EGC11781.1| ribonucleotide reductase [Escherichia coli E1167] gi|325496725|gb|EGC94584.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia fergusonii ECD227] gi|330912066|gb|EGH40576.1| ribonucleotide reductase of class 1a (aerobic), beta subunit [Escherichia coli AA86] gi|331043614|gb|EGI15752.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli M605] gi|331064133|gb|EGI36044.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli TA271] gi|331074646|gb|EGI45966.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli H591] gi|332096162|gb|EGJ01165.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella dysenteriae 155-74] gi|332754883|gb|EGJ85248.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella flexneri 4343-70] gi|332755286|gb|EGJ85650.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella flexneri K-671] gi|332756386|gb|EGJ86737.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella flexneri 2747-71] gi|332766056|gb|EGJ96266.1| nrdB [Shigella flexneri 2930-71] gi|333001382|gb|EGK20950.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella flexneri VA-6] gi|333002603|gb|EGK22163.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella flexneri K-272] gi|333016476|gb|EGK35807.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella flexneri K-304] gi|333016745|gb|EGK36073.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella flexneri K-227] Length = 376 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|312967536|ref|ZP_07781751.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia coli 2362-75] gi|312287733|gb|EFR15638.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia coli 2362-75] Length = 359 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 220 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 279 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 280 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 339 Query: 116 Y 116 Y Sbjct: 340 Y 340 >gi|170767354|ref|ZP_02901807.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia albertii TW07627] gi|170123688|gb|EDS92619.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia albertii TW07627] Length = 376 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|323945045|gb|EGB41110.1| nrdB protein [Escherichia coli H120] gi|333002093|gb|EGK21659.1| ribonucleoside-diphosphate reductase 1 subunit beta domain protein [Shigella flexneri K-218] Length = 178 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 39 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 98 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 99 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 158 Query: 116 Y 116 Y Sbjct: 159 Y 159 >gi|284009345|emb|CBA76525.1| ribonucleoside-diphosphate reductase 1, beta subunit [Arsenophonus nasoniae] Length = 378 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + KE ++ + +A E +A G Sbjct: 239 RDEALHLTGTQHMLNLMRSGQDDPEMAIIAKECEEACYRLFVQAAEQEKEWAEYLFSGGS 298 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 299 MIGLNKDILCQYIEYITNIRMQAVGLKLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 358 Query: 116 Y 116 Y Sbjct: 359 Y 359 >gi|332974193|gb|EGK11127.1| ribonucleotide-diphosphate reductase beta subunit [Psychrobacter sp. 1501(2011)] Length = 377 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 7/122 (5%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN + ++P + ++ +++S + +A E +A G Sbjct: 237 RDEALHLTSTQHMINILASGKDDPEMAEIAEDCREESIEIFRKAAEQEKEWAGYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS-EVIDLKKEKNFFETRVT 114 +GLN QY+++I N R +GL +F ++ NP PW++ + + ET ++ Sbjct: 297 MIGLNKDILCQYVEYITNLRMEAVGLPSIFPDSKSNPIPWINTWLSSDNVQVAPQETEIS 356 Query: 115 EY 116 Y Sbjct: 357 SY 358 >gi|326782536|ref|YP_004323092.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM1] gi|310002750|gb|ADO97149.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM1] Length = 386 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVINQIKI-ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 RDES HL +++ + K ++P + KE Q M E +A +G Sbjct: 246 RDESQHLVITQNILRKWKEGDDPEMAVIAKEEQPFVAEMFKRTVNEEKMWADYLFKQGSM 305 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEKNF-FETRVT 114 +GLN Y+++IANRR IGL+P+F NP PW ++ K ++N ET + Sbjct: 306 IGLNDRLLHNYVEWIANRRMKAIGLDPIFDVPAKNNPLPWTEHWLNSKGQQNAPQETEIE 365 Query: 115 EYQQGA 120 Y G Sbjct: 366 SYVVGG 371 >gi|242238482|ref|YP_002986663.1| ribonucleotide-diphosphate reductase subunit beta [Dickeya dadantii Ech703] gi|242130539|gb|ACS84841.1| ribonucleotide reductase [Dickeya dadantii Ech703] Length = 376 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGQDDPEMAKVAEECQQQCYDLFVMAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFETRTNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|50120137|ref|YP_049304.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium atrosepticum SCRI1043] gi|49610663|emb|CAG74108.1| ribonucleoside-diphosphate reductase 1 beta chain [Pectobacterium atrosepticum SCRI1043] Length = 376 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQGVGLSLPFQTRTNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQIDSEISDD 369 >gi|297521777|ref|ZP_06940163.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli OP50] Length = 174 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 35 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 94 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 95 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 154 Query: 116 Y 116 Y Sbjct: 155 Y 155 >gi|238761950|ref|ZP_04622923.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia kristensenii ATCC 33638] gi|238699678|gb|EEP92422.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia kristensenii ATCC 33638] Length = 400 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ ++P + +E QQ+ + A E +A G Sbjct: 261 RDEALHLTGTQHIINLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 320 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F NP PW+ S ++ + E V+ Sbjct: 321 MIGLNKEILCQYVEYITNIRMQAVGLGVPFNTRTNPIPWINSWLVSDNVQVAPQEVEVSS 380 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 381 YLVGQIDSEISAD 393 >gi|283832326|ref|ZP_06352067.1| ribonucleoside-diphosphate reductase, beta subunit [Citrobacter youngae ATCC 29220] gi|291071973|gb|EFE10082.1| ribonucleoside-diphosphate reductase, beta subunit [Citrobacter youngae ATCC 29220] Length = 376 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + +E +Q+ + +A L E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAALQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQIDSEVDTD 369 >gi|417659|sp|P32209|RIR2_SWPVK RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|347472|gb|AAC37857.1| ribonucleotide reductase [Swinepox virus] Length = 274 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 7/83 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL ++ +++ +A +E + +P +G+N Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSKEVITSIIIDAVNIEKEFLTVAIPVDLIGMN 247 Query: 62 APSCEQYMQFIANRRCHQIGLEP 84 QY++F+A+R ++G E Sbjct: 248 CCLMSQYIEFVADRLLTELGCEK 270 >gi|261211025|ref|ZP_05925315.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio sp. RC341] gi|260840000|gb|EEX66600.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio sp. RC341] Length = 360 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +E +Q+S + EA E +A G Sbjct: 220 RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAAYLFKDGS 279 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID 101 +GLN QY+++I N R +GLEP + T NP PW++ + Sbjct: 280 MIGLNRDILCQYVEYITNIRMQAVGLEPAYPTATTNPIPWINAWLS 325 >gi|269102947|ref|ZP_06155644.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Photobacterium damselae subsp. damselae CIP 102761] gi|268162845|gb|EEZ41341.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Photobacterium damselae subsp. damselae CIP 102761] Length = 377 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + KE + + + A E +A G Sbjct: 237 RDEALHLTGTQHILNLLRNGHDDPEMAEIAKESEAECFDIFKRAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101 +GLN QY+++I N R + +GLE + T+NP PW++ + Sbjct: 297 MIGLNKDILCQYVEYITNLRMNAVGLEHAYTGATQNPIPWINSWLS 342 >gi|326781924|ref|YP_004322326.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM2] gi|310003114|gb|ADO97512.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM2] Length = 397 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVINQI-KIENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 RDE+ HL +++N+ + ++P + KE ++ + A E +A G Sbjct: 257 RDENQHLAITQNILNKWAQGDDPEMKQIMKEEEEWTYKAFDNAVNEEKRWADYLFKDGSM 316 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEKNF-FETRVT 114 +GLN +QY++++ANRR IGL+P + NP PW I K + ET V Sbjct: 317 IGLNDKLLQQYVEWVANRRLKAIGLKPQYDIAASANPLPWTQHWISSKGLQVAPQETEVE 376 Query: 115 EYQQGA 120 Y G Sbjct: 377 SYVVGG 382 >gi|331035505|gb|AEC53062.1| ribonucleotide reductase subunit B [Synechococcus phage S-CRM01] Length = 381 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKS---RTMLHEATLLEIAYAHETMPKG-F 57 RDE+ HL ++IN + + K + ++ ++ A E A+A G Sbjct: 241 RDENQHLFLTQNIINNWRNNDDPEMKKIYNEEIDHTTSLFEAAVDQEKAWAQYLFKTGSM 300 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114 +GL+ Y+++IANRR IG++P+++ NP PWM + K +N ET + Sbjct: 301 IGLSEKLLCNYVEWIANRRMKAIGIKPIYEIPANSNPLPWMDHWLKSKGVQNAPQETEIE 360 Query: 115 EYQQGA 120 Y G Sbjct: 361 SYIVGG 366 >gi|221134587|ref|ZP_03560892.1| ribonucleotide-diphosphate reductase subunit beta [Glaciecola sp. HTCC2999] Length = 376 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 5/105 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL V+N ++P + KE +Q++R + A E +A G Sbjct: 237 RDENLHLTSTQHVLNLWAKGKDDPEMAEIAKECEQEARDIFLNAVQQEKEWAAFLFNNGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101 +GLN Y+++IAN+R IGL F + NP PWM+ ++ Sbjct: 297 MIGLNEEILCSYVEYIANQRMAAIGLGQPFDVSSNPLPWMNNYLN 341 >gi|292488819|ref|YP_003531706.1| ribonucleoside-diphosphate reductase 1 subunit beta [Erwinia amylovora CFBP1430] gi|292899970|ref|YP_003539339.1| ribonucleoside-diphosphate reductase 1 subunit beta [Erwinia amylovora ATCC 49946] gi|291199818|emb|CBJ46941.1| ribonucleoside-diphosphate reductase 1 beta subunit [Erwinia amylovora ATCC 49946] gi|291554253|emb|CBA21550.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia amylovora CFBP1430] gi|312172977|emb|CBX81232.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia amylovora ATCC BAA-2158] Length = 376 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + KE +Q+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAKECRQECYDLFVLAAEQEKEWAEYLFSGGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R + +GL+ FK NP PW+ S ++ + E V+ Sbjct: 297 MIGLNKDILWQYIEYITNIRMNAVGLDLPFKTRSNPIPWINSWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|88801048|ref|ZP_01116596.1| ribonucleotide-diphosphate reductase beta subunit [Reinekea sp. MED297] gi|88776187|gb|EAR07414.1| ribonucleotide-diphosphate reductase beta subunit [Reinekea sp. MED297] Length = 369 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 5/105 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL+ ++ Q ++P + E Q R + +A E A+A+ G Sbjct: 230 RDEALHLSGTEFILRQWLHGGDDPQMQIVADEEQATIRQIFEDAAEQEKAWANYLFNDGS 289 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101 +GLNA QY++++ ++R + L P++ +NP PWM + Sbjct: 290 MIGLNAEILHQYIEYLTDQRLDALSLSPIYGRRDNPLPWMDNWVS 334 >gi|120598753|ref|YP_963327.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp. W3-18-1] gi|146293170|ref|YP_001183594.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella putrefaciens CN-32] gi|120558846|gb|ABM24773.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Shewanella sp. W3-18-1] gi|145564860|gb|ABP75795.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Shewanella putrefaciens CN-32] gi|319426318|gb|ADV54392.1| ribonucleotide reductase [Shewanella putrefaciens 200] Length = 376 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN ++N ++ ++P + + QQ++ + +A E +A G Sbjct: 237 RDEALHLNSTQHILNIMQGGKDDPEMGEIAAQCQQEAYDLFLKAAEQEKEWAKYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 +GLN QY++FI N+R + L + + NP PWM + Sbjct: 297 MIGLNEQILCQYVEFITNQRMKSVNLPQPYPESTNPLPWMKNWL 340 >gi|283786035|ref|YP_003365900.1| ribonucleoside-diphosphate reductase 1 beta chain [Citrobacter rodentium ICC168] gi|282949489|emb|CBG89102.1| ribonucleoside-diphosphate reductase 1 beta chain [Citrobacter rodentium ICC168] Length = 376 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A L E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAALQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQIDSEVDTD 369 >gi|183599610|ref|ZP_02961103.1| hypothetical protein PROSTU_03095 [Providencia stuartii ATCC 25827] gi|188021860|gb|EDU59900.1| hypothetical protein PROSTU_03095 [Providencia stuartii ATCC 25827] Length = 378 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E + + + +A E +A +G Sbjct: 239 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEDECYKLFVDAAEQEKEWAEYLFSEGS 298 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 299 MIGLNKDILCQYVEYITNIRMQAVGLKLPFEARSNPIPWINAWLVSDNVQVAPQEVEVSS 358 Query: 116 Y 116 Y Sbjct: 359 Y 359 >gi|251790602|ref|YP_003005323.1| ribonucleotide-diphosphate reductase subunit beta [Dickeya zeae Ech1591] gi|247539223|gb|ACT07844.1| ribonucleotide reductase [Dickeya zeae Ech1591] Length = 376 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRAGQDDPEMAQVAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFETRTNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQIDSEINTD 369 >gi|237732274|ref|ZP_04562755.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter sp. 30_2] gi|226907813|gb|EEH93731.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter sp. 30_2] Length = 376 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + +E +Q+ + +A L E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAALQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|238797463|ref|ZP_04640962.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia mollaretii ATCC 43969] gi|238718734|gb|EEQ10551.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia mollaretii ATCC 43969] Length = 376 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ ++P + +E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHIINLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F NP PW+ S ++ + E V+ Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGVPFNTRTNPIPWINSWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQIDSEISAD 369 >gi|253989035|ref|YP_003040391.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211638141|emb|CAR66767.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotid reductase 1) (b2 protein) (r2 protein) [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780485|emb|CAQ83647.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotid reductase 1) (b2 protein) (r2 protein) [Photorhabdus asymbiotica] Length = 376 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E +Q+ + +A E +A +G Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIANECEQQCYDLFVQAAEQEKEWADYLFSEGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNRDILCQYVEYITNIRMQAVGLKLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|152971181|ref|YP_001336290.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206577425|ref|YP_002237361.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella pneumoniae 342] gi|262043285|ref|ZP_06016416.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288934289|ref|YP_003438348.1| ribonucleotide reductase [Klebsiella variicola At-22] gi|330000612|ref|ZP_08303755.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp. MS 92-3] gi|150956030|gb|ABR78060.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206566483|gb|ACI08259.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella pneumoniae 342] gi|259039384|gb|EEW40524.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288889018|gb|ADC57336.1| ribonucleotide reductase [Klebsiella variicola At-22] gi|328537954|gb|EGF64133.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp. MS 92-3] Length = 376 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVLAAQQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQIDSEVDAD 369 >gi|261253084|ref|ZP_05945657.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio orientalis CIP 102891] gi|260936475|gb|EEX92464.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio orientalis CIP 102891] Length = 377 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ +E +Q+ + EA E +A G Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101 +GLN QY+++I N R +GL + + T NP PW++ + Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGAAYPEATSNPIPWINAWLS 342 >gi|255026984|ref|ZP_05298970.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes FSL J2-003] Length = 336 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 4/110 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F +VI I ENP L T+E + + A LE ++ E + G G++ Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWSEEVLQ-GIEGID 279 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNF 108 Y+++ AN+ +G+ L+ +++N W+ D + + +F Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDF 329 >gi|61806080|ref|YP_214440.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM2] gi|61374589|gb|AAX44586.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM2] gi|265525292|gb|ACY76089.1| NrdB [Prochlorococcus phage P-SSM2] Length = 384 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVINQIKI-ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 RDE+ HL +++N + ++P + KE +Q + M + E +A G Sbjct: 244 RDENQHLAITQNILNNWRKGDDPEMVEIMKEEEQWTYQMFEKCVNEEKMWAEYLFKDGSM 303 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEKNF-FETRVT 114 +GLN QY++++ANRR IG++P++ NP PW I K + ET V Sbjct: 304 IGLNDKLLHQYVEWVANRRMRSIGMKPVYDIAAKNNPLPWTEHWISSKGLQVAPQETEVE 363 Query: 115 EYQQGA 120 Y G Sbjct: 364 SYIVGG 369 >gi|296103863|ref|YP_003614009.1| ribonucleotide-diphosphate reductase beta subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058322|gb|ADF63060.1| ribonucleotide-diphosphate reductase beta subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 376 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVLAAQQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|282600304|ref|ZP_05973774.2| ribonucleoside-diphosphate reductase, beta subunit [Providencia rustigianii DSM 4541] gi|282565783|gb|EFB71318.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia rustigianii DSM 4541] Length = 380 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E +++ + +A E +A +G Sbjct: 241 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEEQCYQLFVDAAEQEKEWAEYLFSEGS 300 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 301 MIGLNKEILCQYVEYITNIRMQAVGLKLPFEARSNPIPWINAWLVSDNVQVAPQEVEVSS 360 Query: 116 Y 116 Y Sbjct: 361 Y 361 >gi|89074073|ref|ZP_01160574.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium sp. SKA34] gi|89050211|gb|EAR55722.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium sp. SKA34] Length = 377 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E +Q + A E +A G Sbjct: 237 RDEALHLTGTQHILNLLRNGHDDPEMVEIATECEQDCFDLFKAAAEQEKEWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 101 +GLN QY+++I N R +GL P ++ T+NP PW++ + Sbjct: 297 MIGLNKQILCQYVEYITNLRMVAVGLRPAYEGATQNPIPWINSWLS 342 >gi|153819185|ref|ZP_01971852.1| ribonucleoside-diphosphate reductase 1 subunit beta [Vibrio cholerae NCTC 8457] gi|126510271|gb|EAZ72865.1| ribonucleoside-diphosphate reductase 1 subunit beta [Vibrio cholerae NCTC 8457] Length = 171 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +E +Q+S + EA E +A G Sbjct: 31 RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAEYLFKDGS 90 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID 101 +GLN QY+++I N R +GLEP + NP PW++ + Sbjct: 91 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWINAWLS 136 >gi|330445621|ref|ZP_08309273.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489812|dbj|GAA03770.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 377 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E +Q+ + A E +A G Sbjct: 237 RDEALHLTGTQHILNLLRTGQDDPEMAEIAVECEQECFDIFKSAAEQEKDWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 101 +GLN QY+++I N R +GL P ++ T+NP PW++ + Sbjct: 297 MIGLNKQILCQYVEYITNLRMSAVGLRPAYEGATQNPIPWINSWLS 342 >gi|157375444|ref|YP_001474044.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sediminis HAW-EB3] gi|157317818|gb|ABV36916.1| Ribonucleoside-diphosphate reductase [Shewanella sediminis HAW-EB3] Length = 376 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQI--KIENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL+ ++ ++P + +E ++ R + + E +A G Sbjct: 237 RDEALHLSGTQHILKLWANGNDDPEMVEVCQELREAGRQVFLDVVEQEKEWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI-DLKKEKNFFETRVTE 115 +GLNA +QY+++I+N R IG E F NP PW++ + + E+ +T Sbjct: 297 MIGLNAEILKQYIEYISNNRMEAIGYEAPFAIKNNPLPWINTYLVSDNVQVAPQESEITS 356 Query: 116 Y---QQGAELKWD 125 Y Q A + D Sbjct: 357 YLVGQVDATVSDD 369 >gi|262274472|ref|ZP_06052283.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Grimontia hollisae CIP 101886] gi|262221035|gb|EEY72349.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Grimontia hollisae CIP 101886] Length = 360 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + KE +Q + A E +A G Sbjct: 220 RDEALHLTSTQHMLNILRSGDDDPEMAEIAKECEQVCFDLFKNAAEQEKEWAEYLFKDGS 279 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101 +GLN QY+++I N R +GL+P ++ +NP PW++ + Sbjct: 280 MIGLNKDILCQYVEYITNLRMAAVGLKPAYQGANQNPIPWINAWLS 325 >gi|212638239|ref|YP_002314759.1| ribonucleotide-diphosphate reductase subunit beta [Anoxybacillus flavithermus WK1] gi|212559719|gb|ACJ32774.1| Ribonucleotide reductase, beta subunit [Anoxybacillus flavithermus WK1] Length = 345 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 54/125 (43%), Gaps = 5/125 (4%) Query: 3 DESLHLNFGIDVINQIKIENPHLW-TKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 DE H F ++ + ENP + F + EA E ++ + + G++ Sbjct: 217 DELCHSYFISQLVRAVLWENPQIDENGAFSAWIYDYIDEAIRYETEWSRFVL-RDIDGID 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK---KEKNFFETRVTEYQQ 118 E+Y++++ N+R +GL+ + EN PW+ D + +FFE R Y + Sbjct: 276 VIEMEKYIEYLGNKRLRMLGLDDRYDADENSMPWIRVFSDENVNLGKTDFFEARPRSYTK 335 Query: 119 GAELK 123 ++ Sbjct: 336 TTDVN 340 >gi|271499642|ref|YP_003332667.1| ribonucleotide reductase [Dickeya dadantii Ech586] gi|270343197|gb|ACZ75962.1| ribonucleotide reductase [Dickeya dadantii Ech586] Length = 376 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRAGQDDPEMAQIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFETRTNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQIDSEINTD 369 >gi|3891582|pdb|1AV8|A Chain A, Ribonucleotide Reductase R2 Subunit From E. Coli gi|3891583|pdb|1AV8|B Chain B, Ribonucleotide Reductase R2 Subunit From E. Coli Length = 340 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 +GLN QY+++I N R +GL+ F+ NP PW++ + Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWL 339 >gi|323497713|ref|ZP_08102728.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio sinaloensis DSM 21326] gi|323317189|gb|EGA70185.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio sinaloensis DSM 21326] Length = 377 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ +E +Q+ + EA E +A G Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101 +GLN QY+++I N R +GL + + T NP PW++ + Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGAAYPEATSNPIPWINAWLS 342 >gi|255928974|ref|YP_003097286.1| ribonucleotide reductase B subunit [Synechococcus phage S-RSM4] gi|255705260|emb|CAR63249.1| ribonucleotide reductase B subunit [Synechococcus phage S-RSM4] Length = 394 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVINQIKI-ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 RDES H+ +++N+ K ++P + KE ++ M + E +A G Sbjct: 254 RDESQHMTITQNILNKWKEGDDPEMVQIAKEEEENVYDMFRQCVEEEKLWAEYLFKDGSI 313 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEKNF-FETRVT 114 +GLN +Y+++ ANRR IGL+ +F + NP PW + K + ET V Sbjct: 314 IGLNDKLLSKYVEWTANRRLKSIGLKAIFDTPVSNNPLPWTEHWLSSKGMQVAPQETEVE 373 Query: 115 EYQQGA 120 Y G+ Sbjct: 374 SYLIGS 379 >gi|258624428|ref|ZP_05719375.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus VM603] gi|258583275|gb|EEW08077.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus VM603] Length = 381 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ +E +Q+S + +A E +A G Sbjct: 241 RDEALHLTGTQHMINILRNGMDDFTFLQVAEECKQESFDLFKQAAEQEKEWASYLFKDGS 300 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101 +GLN QY+++I N R +GLEP + NP PW++ + Sbjct: 301 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAAVNNPIPWINAWLS 346 >gi|1941986|pdb|1PFR|A Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain gi|1941987|pdb|1PFR|B Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain Length = 340 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 +GLN QY+++I N R +GL+ F+ NP PW++ + Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWL 339 >gi|3891570|pdb|2AV8|A Chain A, Y122f Mutant Of Ribonucleotide Reductase From Escherichia Coli gi|3891571|pdb|2AV8|B Chain B, Y122f Mutant Of Ribonucleotide Reductase From Escherichia Coli Length = 340 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 +GLN QY+++I N R +GL+ F+ NP PW++ + Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWL 339 >gi|262171721|ref|ZP_06039399.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio mimicus MB-451] gi|261892797|gb|EEY38783.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio mimicus MB-451] Length = 377 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ +E +Q+S + +A E +A G Sbjct: 237 RDEALHLTGTQHMINILRNGMDDFTFLQVAEECKQESFDLFKQAAEQEKEWASYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101 +GLN QY+++I N R +GLEP + NP PW++ + Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAAVNNPIPWINAWLS 342 >gi|221105497|ref|XP_002169241.1| PREDICTED: similar to ribonucleoside-diphosphate reductase small chain [Hydra magnipapillata] Length = 363 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 11/119 (9%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DE +H FG + I + ++ ++ EA + ++ + + +G+N Sbjct: 237 DEGMHTIFGCVIYTFIIY-------RLSFEEICELMKEAVEICKSFTKDAICVDMIGMNV 289 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENP--FPWMSEVIDLKKEKNFFETRVTEYQQG 119 Y++++A+R +G E +F T+ P F +M + L K+ NFFE R TEYQ+ Sbjct: 290 ELMYNYIEYVADRLMVYLGYEKIF-MTKIPDQFQFMDTIGFLNKD-NFFERRATEYQKA 346 >gi|308049658|ref|YP_003913224.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Ferrimonas balearica DSM 9799] gi|307631848|gb|ADN76150.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Ferrimonas balearica DSM 9799] Length = 378 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 37/104 (35%), Positives = 49/104 (47%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE LHL +IN + ++P + E +S + A E A+A G Sbjct: 239 RDEQLHLVGTQHMINLMADGRDDPEMAEIAIECHSESIEIFRRAAEQEKAWASYLFKDGS 298 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 +GLN E Y++FI N R IGL PLF NP PWMS + Sbjct: 299 MLGLNKQIIEDYVEFITNERMAGIGLPPLFDKRSNPLPWMSTWL 342 >gi|258620211|ref|ZP_05715250.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus VM573] gi|258587569|gb|EEW12279.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus VM573] Length = 381 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ +E +Q+S + +A E +A G Sbjct: 241 RDEALHLTGTQHMINILRNGMDDFTFLQVAEECKQESFDLFKQAAEQEKEWASYLFKDGS 300 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101 +GLN QY+++I N R +GLEP + NP PW++ + Sbjct: 301 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAAVNNPIPWINAWLS 346 >gi|262165506|ref|ZP_06033243.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio mimicus VM223] gi|262025222|gb|EEY43890.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio mimicus VM223] Length = 377 Score = 103 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ +E +Q+S + +A E +A G Sbjct: 237 RDEALHLTGTQHMINILRNGMDDFTFLQVAEECKQESFDLFKQAAEQEKEWASYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101 +GLN QY+++I N R +GLEP + NP PW++ + Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAAVNNPIPWINAWLS 342 >gi|146312444|ref|YP_001177518.1| ribonucleotide-diphosphate reductase subunit beta [Enterobacter sp. 638] gi|145319320|gb|ABP61467.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Enterobacter sp. 638] Length = 376 Score = 103 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + +E +Q+ + A L E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVLAALQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GLE FK NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLELPFKTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|83754022|pdb|2ALX|A Chain A, Ribonucleotide Reductase R2 From Escherichia Coli In Space Group P6(1)22 Length = 340 Score = 103 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 +GLN QY+++I N R +GL+ F+ NP PW++ + Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWL 340 >gi|242012701|ref|XP_002427066.1| Ribonucleoside-diphosphate reductase M2 subunit, putative [Pediculus humanus corporis] gi|212511324|gb|EEB14328.1| Ribonucleoside-diphosphate reductase M2 subunit, putative [Pediculus humanus corporis] Length = 304 Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 42/84 (50%), Gaps = 7/84 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + ++ K + + ++ +A +E + E +P +G+N Sbjct: 226 RDEGLHCDFACLMFK-------YVVQKPTEDEICDIIKDAVAIEQEFLTEALPVNLIGMN 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPL 85 ++Y++F+A+R ++G + + Sbjct: 279 CSLMKKYIEFVADRLLVELGCKKV 302 >gi|117619492|ref|YP_856857.1| ribonucleotide-diphosphate reductase subunit beta [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560899|gb|ABK37847.1| ribonucleoside-diphosphate reductase, beta subunit [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 377 Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 7/122 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E +Q + EA + E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGQDDPEMAEIAAECEQACFELFKEAAIQEKEWAEYLFQDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS-EVIDLKKEKNFFETRVT 114 +GLN QY+++I N R + +GL+P F + NP PW++ + + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNLRMNAVGLQPAFAGAKQNPIPWINTWLSSDNVQVAPQEVEVS 356 Query: 115 EY 116 Y Sbjct: 357 SY 358 >gi|156975012|ref|YP_001445919.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio harveyi ATCC BAA-1116] gi|156526606|gb|ABU71692.1| hypothetical protein VIBHAR_02734 [Vibrio harveyi ATCC BAA-1116] Length = 377 Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +IN ++ +E +Q+ + EA E +A G Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFLFMQIAEEEKQECFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101 +GLN QY+++I N R +GL + + T NP PW++ + Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATSNPIPWINAWLS 342 >gi|85711601|ref|ZP_01042658.1| ribonucleotide-diphosphate reductase beta subunit [Idiomarina baltica OS145] gi|85694461|gb|EAQ32402.1| ribonucleotide-diphosphate reductase beta subunit [Idiomarina baltica OS145] Length = 377 Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 6/105 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE++HL +IN + ++P + +E ++ + A E +AH G Sbjct: 237 RDENVHLTSTQHMINLWQDGEDDPEMAEIAEELADEAYEIFMTAVKQEKQWAHYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVI 100 +GLN QY+++IAN R IG + F + NP PWM++ + Sbjct: 297 MIGLNESMLCQYVEYIANLRMQAIGYDAPFPEQRSNPLPWMNKYL 341 >gi|307129979|ref|YP_003881995.1| Ribonucleotide reductase of class Ia (aerobic), subunit beta [Dickeya dadantii 3937] gi|306527508|gb|ADM97438.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Dickeya dadantii 3937] Length = 376 Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRAGQDDPEMAKIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFETRTNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|329298015|ref|ZP_08255351.1| ribonucleotide-diphosphate reductase subunit beta [Plautia stali symbiont] Length = 376 Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E + + + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRTGEDDPEMKEIAAECRDECFDLFKKAAEQEKEWAEYLFSGGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW+ S ++ + E V+ Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLDLPFQTRSNPIPWINSWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|269862698|ref|XP_002650940.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220065381|gb|EED43116.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] Length = 332 Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 10/96 (10%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + I + ++ EA +E + E++P +G+N Sbjct: 247 RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 297 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 QY++F+A+R +G + ++ + PF +M Sbjct: 298 CKLMCQYIEFVADRLLFALGEKKIYNVST-PFDFME 332 >gi|260778827|ref|ZP_05887719.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio coralliilyticus ATCC BAA-450] gi|260604991|gb|EEX31286.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio coralliilyticus ATCC BAA-450] Length = 377 Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKDAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101 +GLN QY+++I N R +GL+ + + T NP PW++ + Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDAAYPEATSNPIPWINAWLS 342 >gi|153835812|ref|ZP_01988479.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio harveyi HY01] gi|148867435|gb|EDL66832.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio harveyi HY01] Length = 377 Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +IN ++ +E +Q+ + EA E +A G Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFSFMQIAEEAKQECFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101 +GLN QY+++I N R +GL + + T NP PW++ + Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATSNPIPWINAWLS 342 >gi|323494790|ref|ZP_08099889.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio brasiliensis LMG 20546] gi|323310983|gb|EGA64148.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio brasiliensis LMG 20546] Length = 377 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKDAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101 +GLN QY+++I N R +GL+ + + T NP PW++ + Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDAAYPEATSNPIPWINAWLS 342 >gi|260598671|ref|YP_003211242.1| ribonucleotide-diphosphate reductase subunit beta [Cronobacter turicensis z3032] gi|260217848|emb|CBA32365.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Cronobacter turicensis z3032] Length = 376 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGEDDPEMAIIAEECKQECYDLFVLAAQQEKEWAEYLFQGGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ FK NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFKTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|156933156|ref|YP_001437072.1| ribonucleotide-diphosphate reductase subunit beta [Cronobacter sakazakii ATCC BAA-894] gi|156531410|gb|ABU76236.1| hypothetical protein ESA_00966 [Cronobacter sakazakii ATCC BAA-894] Length = 376 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGEDDPEMAAIAEECKQECYDLFVLAAQQEKEWAEYLFQGGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ FK NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFKTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|149190928|ref|ZP_01869191.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio shilonii AK1] gi|148835283|gb|EDL52257.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio shilonii AK1] Length = 377 Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ +E +Q + EA E +A G Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQDCFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101 +GLN QY+++I+N R +GL+ + + T NP PW++ + Sbjct: 297 MIGLNKDILCQYVEYISNVRMQAVGLDAAYPEATSNPIPWINAWLS 342 >gi|27366311|ref|NP_761839.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio vulnificus CMCP6] gi|37679427|ref|NP_934036.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio vulnificus YJ016] gi|320156821|ref|YP_004189200.1| ribonucleotide reductase of class Ia (aerobic), subunit beta [Vibrio vulnificus MO6-24/O] gi|27362512|gb|AAO11366.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Vibrio vulnificus CMCP6] gi|37198171|dbj|BAC94007.1| ribonucleotide reductase, beta subunit [Vibrio vulnificus YJ016] gi|319932133|gb|ADV86997.1| ribonucleotide reductase of class Ia (aerobic), beta subunit [Vibrio vulnificus MO6-24/O] Length = 377 Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +IN ++ +E +Q+ + EA E +A G Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFSFMQIAEEAKQQCFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101 +GLN QY+++I N R +GL + T NP PW++ + Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPVAYPNATSNPIPWINAWLS 342 >gi|327394563|dbj|BAK11985.1| ribonucleoside-diphosphate reductase 1 beta subunit NrdB [Pantoea ananatis AJ13355] Length = 376 Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E +++ + +A L E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRTGEDDPEMKEIAAECREECFELFKKAALQEKEWAEYLFSGGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLDLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|56460472|ref|YP_155753.1| ribonucleotide-diphosphate reductase subunit beta [Idiomarina loihiensis L2TR] gi|56179482|gb|AAV82204.1| Ribonucleotide reductase, beta subunit [Idiomarina loihiensis L2TR] Length = 377 Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 6/105 (5%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE++HL ++N Q ++P + +E + + + A E +AH G Sbjct: 237 RDENVHLTSTQHILNLWQYGEDDPEMKEIAEELRDDAYEIFMTAVKQEKQWAHYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVI 100 +GLN QY+++IAN R IG + F+ NP PWM++ + Sbjct: 297 MIGLNESMLCQYVEYIANLRMQAIGFDAPFENQRSNPLPWMNKYL 341 >gi|148978906|ref|ZP_01815226.1| ribonucleotide-diphosphate reductase beta subunit [Vibrionales bacterium SWAT-3] gi|145962104|gb|EDK27390.1| ribonucleotide-diphosphate reductase beta subunit [Vibrionales bacterium SWAT-3] Length = 377 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ +E +Q+ + EA E +A G Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFAFMQIAEECKQECFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101 +GLN QY+++I N R +GL + + T NP PW++ + Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGTAYPEATSNPIPWINAWLS 342 >gi|332162349|ref|YP_004298926.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606422|emb|CBY27920.1| ribonucleotide reductase of class Ia (aerobic),beta subunit [Yersinia enterocolitica subsp. palearctica Y11] gi|325666579|gb|ADZ43223.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330864218|emb|CBX74276.1| ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia enterocolitica W22703] Length = 376 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHILNLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F NP PW+ S ++ + E V+ Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGVPFNTRTNPIPWINSWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQIDSEVSAD 369 >gi|291618170|ref|YP_003520912.1| NrdB [Pantoea ananatis LMG 20103] gi|291153200|gb|ADD77784.1| NrdB [Pantoea ananatis LMG 20103] Length = 387 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E +++ + +A L E +A G Sbjct: 248 RDEALHLTGTQHMLNLLRTGEDDPEMKEIAAECREECFELFKKAALQEKEWAEYLFSGGS 307 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 308 MIGLNKDILCQYIEYITNIRMQAVGLDLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 367 Query: 116 Y 116 Y Sbjct: 368 Y 368 >gi|28898709|ref|NP_798314.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio parahaemolyticus RIMD 2210633] gi|153839553|ref|ZP_01992220.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio parahaemolyticus AQ3810] gi|260363692|ref|ZP_05776476.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio parahaemolyticus K5030] gi|260879741|ref|ZP_05892096.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio parahaemolyticus AN-5034] gi|260898785|ref|ZP_05907226.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio parahaemolyticus Peru-466] gi|260901598|ref|ZP_05909993.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio parahaemolyticus AQ4037] gi|28806927|dbj|BAC60198.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio parahaemolyticus RIMD 2210633] gi|149746934|gb|EDM57922.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio parahaemolyticus AQ3810] gi|308086689|gb|EFO36384.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio parahaemolyticus Peru-466] gi|308093260|gb|EFO42955.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio parahaemolyticus AN-5034] gi|308108691|gb|EFO46231.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio parahaemolyticus AQ4037] gi|308113401|gb|EFO50941.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio parahaemolyticus K5030] Length = 377 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +IN ++ +E +Q + EA E +A G Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFSFMQIAEEAKQDCFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101 +GLN QY+++I N R +GL + + T NP PW++ + Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATTNPIPWINAWLS 342 >gi|312885176|ref|ZP_07744856.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio caribbenthicus ATCC BAA-2122] gi|309367189|gb|EFP94761.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio caribbenthicus ATCC BAA-2122] Length = 377 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKDAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101 +GLN QY+++I N R +GL+ + + T NP PW++ + Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLDAAYPEATSNPIPWINAWLS 342 >gi|91227184|ref|ZP_01261643.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio alginolyticus 12G01] gi|262393879|ref|YP_003285733.1| ribonucleotide reductase of class Ia (aerobic) subunit beta [Vibrio sp. Ex25] gi|269967067|ref|ZP_06181135.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio alginolyticus 40B] gi|91188712|gb|EAS75000.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio alginolyticus 12G01] gi|262337473|gb|ACY51268.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio sp. Ex25] gi|269828326|gb|EEZ82592.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio alginolyticus 40B] Length = 377 Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +IN ++ +E +Q + EA E +A G Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFTFMQIAEEAKQDCFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101 +GLN QY+++I N R +GL + + T NP PW++ + Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATTNPIPWINAWLS 342 >gi|84386981|ref|ZP_00990005.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio splendidus 12B01] gi|86148466|ref|ZP_01066756.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp. MED222] gi|218709927|ref|YP_002417548.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio splendidus LGP32] gi|84378271|gb|EAP95130.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio splendidus 12B01] gi|85833763|gb|EAQ51931.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp. MED222] gi|218322946|emb|CAV19123.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio splendidus LGP32] Length = 377 Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ +E +Q+ + EA E +A G Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFEFMQIAEECKQECFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101 +GLN QY+++I N R +GL + + T NP PW++ + Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGTAYPEATSNPIPWINAWLS 342 >gi|328474726|gb|EGF45531.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio parahaemolyticus 10329] Length = 377 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +IN ++ +E +Q + EA E +A G Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFSFMQIAEEAKQDCFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101 +GLN QY+++I N R +GL + + T NP PW++ + Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATTNPIPWINAWLS 342 >gi|326782933|ref|YP_004323331.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-RSM4] gi|310004192|gb|ADO98586.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-RSM4] Length = 388 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVI-NQIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 RDES HL +++ N K ++ + KE + M E +A+ +G Sbjct: 248 RDESQHLVITQNILKNWAKGDDSEMAEIAKEEKPFVVDMFKRTVEEEKTWANYLFREGSM 307 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEKNF-FETRVT 114 +GLN Y+++IANRR IGL+P+F NP PW ++ K ++N ET + Sbjct: 308 IGLNDRLLHNYVEWIANRRMKAIGLDPVFDQVARNNPLPWTQHWLNSKGQQNAPQETEIE 367 Query: 115 EYQQGA 120 Y G Sbjct: 368 SYVVGG 373 >gi|260768282|ref|ZP_05877216.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio furnissii CIP 102972] gi|260616312|gb|EEX41497.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio furnissii CIP 102972] gi|315179989|gb|ADT86903.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio furnissii NCTC 11218] Length = 377 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN ++ +E +Q+ + +A E +A G Sbjct: 237 RDEALHLTGTQHMINLLRNGMDDFEFLQIAEECKQECFDLFKQAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID 101 +GLN QY+++I N R +GL+ + T NP PW++ + Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDAAYPSATTNPIPWINAWLS 342 >gi|291570484|dbj|BAI92756.1| ribonucleoside-diphosphate reductase beta chain [Arthrospira platensis NIES-39] Length = 123 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 13/126 (10%) Query: 8 LNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQ 67 + +I + PH Q + M A E + + + +G+ S EQ Sbjct: 1 MRLFQKIIPEAMAIFPH-----SQDRIYEMFDAAVQHECRWTNHIVGNNILGITEHSTEQ 55 Query: 68 YMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK----EKNFFETRVTEYQQGA 120 Y +++AN R IGLE L+ KY ++P+ + D KK + NFFE VT Y + Sbjct: 56 YTKYLANIRLRSIGLESLYSDPKYQKSPYTHLERFSDTKKEAHTKANFFEASVTSYVMSS 115 Query: 121 ELK-WD 125 + WD Sbjct: 116 GVSGWD 121 >gi|193062401|ref|ZP_03043496.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli E22] gi|192932067|gb|EDV84666.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli E22] Length = 393 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E + + + +A E +A G Sbjct: 254 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKLECYDLFVQAAQQEKDWADYLFRDGS 313 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 314 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 373 Query: 116 Y 116 Y Sbjct: 374 Y 374 >gi|123441721|ref|YP_001005705.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088682|emb|CAL11484.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 376 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHILNLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F NP PW+ S ++ + E V+ Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGIPFNTRTNPIPWINSWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQIDSEVSAD 369 >gi|326783253|ref|YP_004323801.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn33] gi|310005200|gb|ADO99589.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn33] Length = 296 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVINQIKI-ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 RDES HL +++N+ + ++P + KE Q +M A E +A G Sbjct: 156 RDESQHLVLTQNILNKWRDGDDPEMDIIAKEEQSWVMSMFQRAVDEEKMWAEYLFKNGSM 215 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEKNF-FETRVT 114 +GLN Y+++IANRR I ++P+F NP PW ++ K ++N ET + Sbjct: 216 IGLNERLLHNYVEWIANRRMKAICIKPMFDIPAKNNPLPWTEHWLNSKGQQNAPQETEIE 275 Query: 115 EYQQGA 120 Y G Sbjct: 276 SYVIGG 281 >gi|163748931|ref|ZP_02156182.1| ribonucleotide-diphosphate reductase beta subunit [Shewanella benthica KT99] gi|161331307|gb|EDQ02195.1| ribonucleotide-diphosphate reductase beta subunit [Shewanella benthica KT99] Length = 376 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN ++ ++ +++P + +E +Q + + +A E +A G Sbjct: 237 RDEALHLNSTQHILKIMRAGVDDPEMGEIAEECEQLAYDIFVKAAEQEKEWAQYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 +GLN QY+++I N R + L P + NP PWM + Sbjct: 297 MIGLNEAILCQYVEYITNERMKSVNLTPHYDEITNPLPWMKNWL 340 >gi|12642668|gb|AAK00340.1| ribonucleotide reductase small subunit [Bovine herpesvirus 2] Length = 313 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 7/119 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N +P K + R + EA +EIA+ MP+ L+ Sbjct: 192 RDEAVHTTASCCIYNNYIGAHP----KPPPTRVRQLFLEAVDIEIAFIRAKMPRDGQVLS 247 Query: 62 A---PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 S E Y++F A+R IG +PLF + ++ K NFFE R T Y Sbjct: 248 ESAVASIENYVRFSADRLLCLIGDQPLFNAPPPDANFPLRLMSTDKHTNFFECRSTAYA 306 >gi|300717619|ref|YP_003742422.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia billingiae Eb661] gi|299063455|emb|CAX60575.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia billingiae Eb661] Length = 376 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E +Q+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGEDDPEMAEIARESRQECYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R H +GL+ FK NP PW+ S ++ + E V+ Sbjct: 297 MIGLNKDILCQYIEYITNIRMHAVGLDLPFKTRSNPIPWINSWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|170726650|ref|YP_001760676.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella woodyi ATCC 51908] gi|169811997|gb|ACA86581.1| Ribonucleoside-diphosphate reductase [Shewanella woodyi ATCC 51908] Length = 376 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +I ++ ++P + KE +Q++ + +A E +A G Sbjct: 237 RDEALHLNSTQHIIKLMQAGKDDPEMGEIAKECEQQAYDIFVKAAEQEKEWARYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 +GLN QY+++I N R + L+ + NP PWM + Sbjct: 297 MIGLNEQILCQYVEYITNERMKSVNLDLPYAQITNPLPWMKTWL 340 >gi|301156451|emb|CBW15922.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Haemophilus parainfluenzae T3T1] Length = 376 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q++ + A E +A G Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQEKEWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFGARSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|152979144|ref|YP_001344773.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus succinogenes 130Z] gi|150840867|gb|ABR74838.1| Ribonucleoside-diphosphate reductase [Actinobacillus succinogenes 130Z] Length = 376 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q++ + A E A+A G Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFEARSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|325578589|ref|ZP_08148689.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus parainfluenzae ATCC 33392] gi|325159825|gb|EGC71955.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus parainfluenzae ATCC 33392] Length = 376 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q++ + A E +A G Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQEKEWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFGARSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|238751211|ref|ZP_04612705.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia rohdei ATCC 43380] gi|238710485|gb|EEQ02709.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia rohdei ATCC 43380] Length = 399 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E QQ+ + A E +A G Sbjct: 260 RDEALHLTGTQHILNLMRSGEDDPEMAEIAVECQQQCYDLFVLAAEQEKEWAEYLFRDGS 319 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL FK NP PW+ S ++ + E V+ Sbjct: 320 MIGLNKEILCQYVEYITNIRMQAVGLGTPFKTRTNPIPWINSWLVSDNVQVAPQEVEVSS 379 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 380 YLVGQIDSEISAD 392 >gi|254493923|ref|ZP_05107094.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae 1291] gi|260440303|ref|ZP_05794119.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae DGI2] gi|268594982|ref|ZP_06129149.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria gonorrhoeae 35/02] gi|268596639|ref|ZP_06130806.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria gonorrhoeae FA19] gi|268599210|ref|ZP_06133377.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae MS11] gi|268601557|ref|ZP_06135724.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID18] gi|268603896|ref|ZP_06138063.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID1] gi|268682359|ref|ZP_06149221.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID332] gi|268684517|ref|ZP_06151379.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae SK-92-679] gi|268686827|ref|ZP_06153689.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae SK-93-1035] gi|291043595|ref|ZP_06569311.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria gonorrhoeae DGI2] gi|293398906|ref|ZP_06643071.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria gonorrhoeae F62] gi|59717937|gb|AAW89342.1| putative ribonucleoside diphosphate reductase I beta chain [Neisseria gonorrhoeae FA 1090] gi|226512963|gb|EEH62308.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae 1291] gi|268548371|gb|EEZ43789.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria gonorrhoeae 35/02] gi|268550427|gb|EEZ45446.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria gonorrhoeae FA19] gi|268583341|gb|EEZ48017.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae MS11] gi|268585688|gb|EEZ50364.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID18] gi|268588027|gb|EEZ52703.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID1] gi|268622643|gb|EEZ55043.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID332] gi|268624801|gb|EEZ57201.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae SK-92-679] gi|268627111|gb|EEZ59511.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae SK-93-1035] gi|291012058|gb|EFE04047.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria gonorrhoeae DGI2] gi|291610320|gb|EFF39430.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria gonorrhoeae F62] Length = 384 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + E Q + + +A E +A G Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101 +GLN QY+++I N R +GL F+ +NP PW++ + Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 349 >gi|161572976|ref|YP_207754.2| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae FA 1090] gi|194098862|ref|YP_002001926.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae NCCP11945] gi|239999147|ref|ZP_04719071.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae 35/02] gi|240013945|ref|ZP_04720858.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae DGI18] gi|240016387|ref|ZP_04722927.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae FA6140] gi|240080506|ref|ZP_04725049.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae FA19] gi|240113126|ref|ZP_04727616.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae MS11] gi|240115882|ref|ZP_04729944.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae PID18] gi|240118180|ref|ZP_04732242.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae PID1] gi|240121514|ref|ZP_04734476.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae PID24-1] gi|240123728|ref|ZP_04736684.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae PID332] gi|240125919|ref|ZP_04738805.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae SK-92-679] gi|240128431|ref|ZP_04741092.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae SK-93-1035] gi|193934152|gb|ACF29976.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria gonorrhoeae NCCP11945] Length = 377 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + E Q + + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101 +GLN QY+++I N R +GL F+ +NP PW++ + Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 342 >gi|149197800|ref|ZP_01874849.1| ribonucleotide-diphosphate reductase beta subunit [Lentisphaera araneosa HTCC2155] gi|149139021|gb|EDM27425.1| ribonucleotide-diphosphate reductase beta subunit [Lentisphaera araneosa HTCC2155] Length = 376 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 5/105 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +I + ++P + E + + + A E +A G Sbjct: 237 RDEALHLTGTQQMIQIFREGKDDPEMAEIAAECEGQVYQIFSSAAEQEKEWAKFLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101 +GLNA Y+++I N R G + +F T+NP PWM+ + Sbjct: 297 MIGLNADILGDYVEYITNVRLKASGYKNVFPTTQNPLPWMNSWLS 341 >gi|149911236|ref|ZP_01899859.1| ribonucleotide-diphosphate reductase beta subunit [Moritella sp. PE36] gi|149805690|gb|EDM65689.1| ribonucleotide-diphosphate reductase beta subunit [Moritella sp. PE36] Length = 376 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + + E Q+++ + +A E +A G Sbjct: 237 RDEALHLTSTQHILNLMADGKDDPEMQEISIECFQETQKIFTDAAQQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN Y+++I N R +GL F+ NP PW++ +I + E+ ++ Sbjct: 297 MIGLNKDILSDYIEYITNTRMAAVGLPKAFEVKSNPLPWINAWLISDNVQVAPQESEISS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|238785708|ref|ZP_04629683.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia bercovieri ATCC 43970] gi|238713393|gb|EEQ05430.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia bercovieri ATCC 43970] Length = 376 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E Q + + A E +A G Sbjct: 237 RDEALHLTGTQHILNLMRSGEDDPEMAEIAEECQSQCYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F NP PW+ S ++ + E V+ Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGVPFNTRSNPIPWINSWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQIDSEISAD 369 >gi|309379219|emb|CBX22176.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 384 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + +E Q++ + +A E +A G Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDPEMAEIAEELQEECFKLFKKAAEQEKEWAAYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101 +GLN QY+++I N R +GL F+ +NP PW++ + Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 349 >gi|217973230|ref|YP_002357981.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella baltica OS223] gi|304408853|ref|ZP_07390474.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS183] gi|307302856|ref|ZP_07582611.1| Ribonucleoside-diphosphate reductase [Shewanella baltica BA175] gi|217498365|gb|ACK46558.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS223] gi|304352674|gb|EFM17071.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS183] gi|306913216|gb|EFN43638.1| Ribonucleoside-diphosphate reductase [Shewanella baltica BA175] gi|315267707|gb|ADT94560.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS678] Length = 376 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +++ ++ ++P + E QQ++ + +A E +A G Sbjct: 237 RDEALHLNSTQHILSIMQGGKDDPEMGEIAAECQQEAFDLFFKAAEQEKEWAKYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 +GLN QY++FI N+R + L + NP PWM + Sbjct: 297 MIGLNEQILCQYVEFITNQRMKSVNLPQPYPEITNPLPWMKNWL 340 >gi|153000811|ref|YP_001366492.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella baltica OS185] gi|160875520|ref|YP_001554836.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella baltica OS195] gi|151365429|gb|ABS08429.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS185] gi|160861042|gb|ABX49576.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS195] Length = 386 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +++ ++ ++P + E QQ++ + +A E +A G Sbjct: 247 RDEALHLNSTQHILSIMQGGKDDPEMGEIAAECQQEAFDLFFKAAEQEKEWAKYLFKDGS 306 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 +GLN QY++FI N+R + L + NP PWM + Sbjct: 307 MIGLNEQILCQYVEFITNQRMKSVNLPQPYPEITNPLPWMKNWL 350 >gi|269139684|ref|YP_003296385.1| ribonucleotide reductase, beta subunit [Edwardsiella tarda EIB202] gi|267985345|gb|ACY85174.1| ribonucleotide reductase, beta subunit [Edwardsiella tarda EIB202] gi|304559553|gb|ADM42217.1| Ribonucleotide reductase of class Ia, beta subunit [Edwardsiella tarda FL6-60] Length = 376 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E + + + +A E +A G Sbjct: 237 RDEALHLTGTQHILNLMRSGQDDPEMAEIAAECEDQCYDLFVQAAQQEKEWAGYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNRDILCQYVEYITNIRMQAVGLSLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|308187586|ref|YP_003931717.1| ribonucleoside-diphosphate reductase 1 beta chain [Pantoea vagans C9-1] gi|308058096|gb|ADO10268.1| ribonucleoside-diphosphate reductase 1 beta chain [Pantoea vagans C9-1] Length = 376 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E +++ + +A L E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGEDDPEMKEIAAECREECFELFKKAALQEKEWAEYLFSGGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW+ S ++ + E V+ Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLDLPFQTRSNPIPWINSWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|304398198|ref|ZP_07380072.1| ribonucleotide reductase [Pantoea sp. aB] gi|304354064|gb|EFM18437.1| ribonucleotide reductase [Pantoea sp. aB] Length = 376 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E +++ + +A L E +A G Sbjct: 237 RDEALHLTGTQHMLNLLRSGEDDPEMKEIAAECREECFELFKKAALQEKEWAEYLFSGGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW+ S ++ + E V+ Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLDLPFQTRSNPIPWINSWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|238788616|ref|ZP_04632408.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia frederiksenii ATCC 33641] gi|238723211|gb|EEQ14859.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia frederiksenii ATCC 33641] Length = 383 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+ + A E +A G Sbjct: 244 RDEALHLTGTQHILNLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F NP PW+ S ++ + E V+ Sbjct: 304 MIGLNKEILCQYVEYITNIRMQAVGLGIPFNTRTNPIPWINSWLVSDNVQVAPQEVEVSS 363 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 364 YLVGQIDSEVSAD 376 >gi|254230294|ref|ZP_04923683.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio sp. Ex25] gi|151937191|gb|EDN56060.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio sp. Ex25] Length = 242 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +IN ++ +E +Q + EA E +A G Sbjct: 102 RDEALHLNGTQHMINLLRNGQDDFTFMQIAEEAKQDCFDLFKEAAEQEKEWAEYLFKDGS 161 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101 +GLN QY+++I N R +GL + + T NP PW++ + Sbjct: 162 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATTNPIPWINAWLS 207 >gi|332290530|ref|YP_004421382.1| ribonucleotide-diphosphate reductase subunit beta [Gallibacterium anatis UMN179] gi|330433426|gb|AEC18485.1| ribonucleotide-diphosphate reductase subunit beta [Gallibacterium anatis UMN179] Length = 376 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E QQ++ + A E +A+ G Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECQQEAYDLFVAAAEQEKEWANYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFTTRSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|326784253|ref|YP_004324793.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM5] gi|310003484|gb|ADO97880.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM5] Length = 388 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVINQIKI-ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 RDES HL +++ + K ++P + KE + + M E +A +G Sbjct: 248 RDESQHLVITQNILRKWKEGDDPEMKEIAKEEKGWVQHMFERTVNEEKVWADYLFKQGSM 307 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEKNF-FETRVT 114 +GLN Y+++IANRR IGL+P+F NP PW ++ K ++N ET + Sbjct: 308 IGLNDRLLHNYVEWIANRRMKSIGLDPMFDIPAKNNPLPWTEHWLNSKGQQNAPQETEIE 367 Query: 115 EYQQGA 120 Y G Sbjct: 368 SYVVGG 373 >gi|238753722|ref|ZP_04615083.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia ruckeri ATCC 29473] gi|238707958|gb|EEQ00315.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia ruckeri ATCC 29473] Length = 376 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHILNLMRSGEDDPEMAEIAVECQQQCYDLFVLAAEQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL FK NP PW++ ++ + E V+ Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGTPFKTRTNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQIDSEISAD 369 >gi|332534563|ref|ZP_08410398.1| ribonucleotide reductase of class Ia (aerobic), beta subunit [Pseudoalteromonas haloplanktis ANT/505] gi|332035983|gb|EGI72462.1| ribonucleotide reductase of class Ia (aerobic), beta subunit [Pseudoalteromonas haloplanktis ANT/505] Length = 376 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL+ ++N ++ ++P + + + ++ M +A E +A G Sbjct: 237 RDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCRDEAIKMFVDAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R IGL F+ NP PW+ S ++ + E ++ Sbjct: 297 MIGLNKHILCQYVEYITNARMTAIGLPAQFENNSNPIPWINSWLVSDNVQVAPQEAEISS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|269963956|ref|ZP_06178265.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio harveyi 1DA3] gi|269831299|gb|EEZ85449.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio harveyi 1DA3] Length = 377 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +IN ++ +E +Q + EA E +A G Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFTFMQIAEEAKQDCFDLFKEAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101 +GLN QY+++I N R +GL + + T NP PW++ + Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPMAYPEATSNPIPWINAWLS 342 >gi|315126539|ref|YP_004068542.1| ribonucleotide-diphosphate reductase subunit beta [Pseudoalteromonas sp. SM9913] gi|315015053|gb|ADT68391.1| ribonucleotide-diphosphate reductase subunit beta [Pseudoalteromonas sp. SM9913] Length = 376 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL+ ++N ++ ++P + + ++++ M +A E +A G Sbjct: 237 RDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCREEAIKMFVDAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R IGL F NP PW+ S ++ + E ++ Sbjct: 297 MIGLNKHILCQYVEYITNARMTAIGLPAQFDNNSNPIPWINSWLVSDNVQVAPQEAEISS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|113970253|ref|YP_734046.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp. MR-4] gi|114047558|ref|YP_738108.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp. MR-7] gi|113884937|gb|ABI38989.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Shewanella sp. MR-4] gi|113889000|gb|ABI43051.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Shewanella sp. MR-7] Length = 376 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDV--INQIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN + I Q ++P + E QQ++ + +A E +A G Sbjct: 237 RDEALHLNSTQHILTIMQAGKDDPEMGEIAAECQQEAYNLFLKAAEQEKEWAKYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 +GLN QY+++I N+R + L + NP PWM + Sbjct: 297 MIGLNEQILCQYVEYITNQRMKSVNLPQPYAEQSNPLPWMKNWL 340 >gi|212635281|ref|YP_002311806.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella piezotolerans WP3] gi|212556765|gb|ACJ29219.1| Ribonucleoside-diphosphate reductase, beta subunit [Shewanella piezotolerans WP3] Length = 376 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN ++ ++P + KE +Q + + +A E +A G Sbjct: 237 RDEALHLNSTQHILKIMHAGKDDPEMAEIAKECEQTAIDIFVKAAEQEKEWAKYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 +GLN QY+++I N R + LE + NP PWM + Sbjct: 297 MIGLNEQILCQYVEYITNERMKAVNLESPYAEQSNPLPWMKNWL 340 >gi|237747538|ref|ZP_04578018.1| ribonucleotide-diphosphate reductase subunit beta [Oxalobacter formigenes OXCC13] gi|229378900|gb|EEO28991.1| ribonucleotide-diphosphate reductase subunit beta [Oxalobacter formigenes OXCC13] Length = 376 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + KE +++S + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMGSGEDDPDMAEIAKECREQSIDLFVRAAEQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +G+ F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNRDILCQYVEYITNTRMQAVGMPLPFEIRSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|21959884|gb|AAM86526.1|AE013899_3 ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Yersinia pestis KIM 10] gi|45435621|gb|AAS61179.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis biovar Microtus str. 91001] Length = 391 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N +++ ++P + +E QQ+ + A E +A G Sbjct: 252 RDEALHLTGTQHILNLMRLGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 311 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F NP PW+ S ++ + E V+ Sbjct: 312 MIGLNKEILCQYVEYITNIRMQAVGLGIPFSTRTNPIPWINSWLVSDNVQVAPQEVEVSS 371 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 372 YLVGQIDSEVSAD 384 >gi|148825799|ref|YP_001290552.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae PittEE] gi|148715959|gb|ABQ98169.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae PittEE] Length = 376 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q++ + A E A+A G Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|113461104|ref|YP_719172.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus somnus 129PT] gi|170717681|ref|YP_001784756.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus somnus 2336] gi|112823147|gb|ABI25236.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Haemophilus somnus 129PT] gi|168825810|gb|ACA31181.1| Ribonucleoside-diphosphate reductase [Haemophilus somnus 2336] Length = 376 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q++ + A E +A G Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYELFVAAAEQEKEWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|261493906|ref|ZP_05990416.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495801|ref|ZP_05992236.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308535|gb|EEY09803.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310439|gb|EEY11632.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 376 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++P + +E +Q++ + A E A+A G Sbjct: 237 RDEALHLTGTQHILNIMTYGNDDPEMAEIARECRQEAYELFLSAAEQEKAWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL FK NP PW++ ++ + E V+ Sbjct: 297 MIGLNRDILVQYIEYITNIRMQAVGLPLPFKARSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|145633337|ref|ZP_01789068.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus influenzae 3655] gi|144986183|gb|EDJ92773.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus influenzae 3655] Length = 376 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q++ + A E A+A G Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|119472403|ref|ZP_01614521.1| ribonucleotide-diphosphate reductase beta subunit [Alteromonadales bacterium TW-7] gi|119444925|gb|EAW26223.1| ribonucleotide-diphosphate reductase beta subunit [Alteromonadales bacterium TW-7] Length = 376 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL+ ++N ++ ++P + + + ++ M +A E +A G Sbjct: 237 RDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCRDEAIKMFVQAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R IGL F+ NP PW+ S ++ + E ++ Sbjct: 297 MIGLNKHILCQYVEYITNARMTAIGLPAQFENNSNPIPWINSWLVSDNVQVAPQEAEISS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|114563305|ref|YP_750818.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella frigidimarina NCIMB 400] gi|114334598|gb|ABI71980.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Shewanella frigidimarina NCIMB 400] Length = 376 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN ++ ++ ++P + E +Q++ + +A E +A G Sbjct: 237 RDEALHLNSTQHILALMQGGKDDPEMGEIAAECKQEAYDLFVKAAEQEKEWAKYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 +GLN QY++FI N+R + L + NP PWM + Sbjct: 297 MIGLNEQILCQYVEFITNQRMKSVHLPQPYDEQSNPLPWMKNWL 340 >gi|261400675|ref|ZP_05986800.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria lactamica ATCC 23970] gi|269209585|gb|EEZ76040.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria lactamica ATCC 23970] Length = 377 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + E Q + + +A E +A G Sbjct: 237 RDEALHLTSTQHMLNLMRSGVDDPEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101 +GLN QY+++I N R +GL F+ +NP PW++ + Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 342 >gi|51595597|ref|YP_069788.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pseudotuberculosis IP 32953] gi|108806924|ref|YP_650840.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis Antiqua] gi|108812924|ref|YP_648691.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis Nepal516] gi|145599749|ref|YP_001163825.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis Pestoides F] gi|149366796|ref|ZP_01888830.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis CA88-4125] gi|153950490|ref|YP_001401734.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pseudotuberculosis IP 31758] gi|161484771|ref|NP_670275.2| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis KIM 10] gi|161511422|ref|NP_992302.2| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis biovar Microtus str. 91001] gi|162418296|ref|YP_001605847.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis Angola] gi|165924721|ref|ZP_02220553.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165938305|ref|ZP_02226863.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Orientalis str. IP275] gi|166009974|ref|ZP_02230872.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166211802|ref|ZP_02237837.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167400353|ref|ZP_02305866.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419574|ref|ZP_02311327.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424117|ref|ZP_02315870.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470792|ref|ZP_02335496.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis FV-1] gi|170025073|ref|YP_001721578.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pseudotuberculosis YPIII] gi|186894660|ref|YP_001871772.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pseudotuberculosis PB1/+] gi|218928372|ref|YP_002346247.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis CO92] gi|229841157|ref|ZP_04461316.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843262|ref|ZP_04463408.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis biovar Orientalis str. India 195] gi|229894122|ref|ZP_04509308.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis Pestoides A] gi|229903354|ref|ZP_04518467.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis Nepal516] gi|270487164|ref|ZP_06204238.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis KIM D27] gi|294503227|ref|YP_003567289.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis Z176003] gi|51588879|emb|CAH20493.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pseudotuberculosis IP 32953] gi|108776572|gb|ABG19091.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Yersinia pestis Nepal516] gi|108778837|gb|ABG12895.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Yersinia pestis Antiqua] gi|115346983|emb|CAL19874.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis CO92] gi|145211445|gb|ABP40852.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Yersinia pestis Pestoides F] gi|149291170|gb|EDM41245.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis CA88-4125] gi|152961985|gb|ABS49446.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pseudotuberculosis IP 31758] gi|162351111|gb|ABX85059.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis Angola] gi|165913683|gb|EDR32302.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Orientalis str. IP275] gi|165923781|gb|EDR40913.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165991370|gb|EDR43671.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166207573|gb|EDR52053.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|166962315|gb|EDR58336.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050302|gb|EDR61710.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056966|gb|EDR66729.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751607|gb|ACA69125.1| Ribonucleoside-diphosphate reductase [Yersinia pseudotuberculosis YPIII] gi|186697686|gb|ACC88315.1| ribonucleotide reductase [Yersinia pseudotuberculosis PB1/+] gi|229679124|gb|EEO75227.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis Nepal516] gi|229689609|gb|EEO81670.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis biovar Orientalis str. India 195] gi|229697523|gb|EEO87570.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis biovar Orientalis str. PEXU2] gi|229704007|gb|EEO91020.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis Pestoides A] gi|262361266|gb|ACY57987.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis D106004] gi|262365197|gb|ACY61754.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis D182038] gi|270335668|gb|EFA46445.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis KIM D27] gi|294353686|gb|ADE64027.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis Z176003] gi|320015945|gb|ADV99516.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 376 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N +++ ++P + +E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHILNLMRLGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F NP PW+ S ++ + E V+ Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGIPFSTRTNPIPWINSWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQIDSEVSAD 369 >gi|119774862|ref|YP_927602.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella amazonensis SB2B] gi|119767362|gb|ABL99932.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Shewanella amazonensis SB2B] Length = 391 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN ++N ++ ++ + E QQ++ + A E +A G Sbjct: 252 RDEALHLNSTQHILNIMQGGKDDAEMAEIAIECQQEAYDLFLRAAEQEKEWAKYLFKDGS 311 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 +GLN QY+++I N+R + L + + NP PWM + Sbjct: 312 MIGLNEQILCQYVEYITNQRMKSVNLPLPYPESTNPLPWMKNWL 355 >gi|126658748|ref|ZP_01729893.1| hypothetical protein CY0110_32340 [Cyanothece sp. CCY0110] gi|126620010|gb|EAZ90734.1| hypothetical protein CY0110_32340 [Cyanothece sp. CCY0110] Length = 347 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 9/127 (7%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DE H++ +I + + + + + + H EI + + +G++ Sbjct: 222 DELTHVSLYQKLITEATTKFSY-----SEDEITELFHTTVEREIEWTNHIFDGQILGVSK 276 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENP---FPWMSEVIDLKKEKNFFETRVTEYQQG 119 S E Y +++AN R IG+ ++ ENP W K + FFET VT Y Q Sbjct: 277 ASTEAYTKYLANLRLKAIGIPAIYPKIENPYAHLDWADFKGIGKSKAAFFETEVTGYAQP 336 Query: 120 AELK-WD 125 +K WD Sbjct: 337 TAVKGWD 343 >gi|88859281|ref|ZP_01133921.1| ribonucleotide-diphosphate reductase beta subunit [Pseudoalteromonas tunicata D2] gi|88818298|gb|EAR28113.1| ribonucleotide-diphosphate reductase beta subunit [Pseudoalteromonas tunicata D2] Length = 376 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL+ ++N ++ ++P + + +++S M A E +A G Sbjct: 237 RDEALHLSGTQHMLNIMQDGQDDPEMAIVAAQLREESIEMFRTAAQQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F T NP PW+ S ++ + E ++ Sbjct: 297 MIGLNKDILCQYVEYITNVRMSAVGLPQQFSITSNPIPWINSWLVSDNVQVAPQEAEISS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|16273547|ref|NP_439802.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae Rd KW20] gi|68250262|ref|YP_249374.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae 86-028NP] gi|145629252|ref|ZP_01785051.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae 22.1-21] gi|145631490|ref|ZP_01787259.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae R3021] gi|145639184|ref|ZP_01794791.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae PittII] gi|145641092|ref|ZP_01796673.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae R3021] gi|260581255|ref|ZP_05849073.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus influenzae RdAW] gi|260582634|ref|ZP_05850423.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus influenzae NT127] gi|319776092|ref|YP_004138580.1| ribonucleoside-diphosphate reductase subunit beta [Haemophilus influenzae F3047] gi|319896901|ref|YP_004135096.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus influenzae F3031] gi|329123256|ref|ZP_08251824.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus aegyptius ATCC 11116] gi|1172943|sp|P43755|RIR2_HAEIN RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit gi|1574510|gb|AAC23306.1| ribonucleoside diphosphate reductase, beta chain (nrdB) [Haemophilus influenzae Rd KW20] gi|68058461|gb|AAX88714.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus influenzae 86-028NP] gi|144978755|gb|EDJ88478.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae 22.1-21] gi|144982920|gb|EDJ90433.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae R3021] gi|145271746|gb|EDK11656.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae PittII] gi|145274253|gb|EDK14118.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae 22.4-21] gi|260092082|gb|EEW76027.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus influenzae RdAW] gi|260094306|gb|EEW78205.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus influenzae NT127] gi|301170418|emb|CBW30024.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Haemophilus influenzae 10810] gi|309750762|gb|ADO80746.1| Ribonucleoside diphosphate reductase 1, beta subunit [Haemophilus influenzae R2866] gi|309972945|gb|ADO96146.1| Ribonucleoside diphosphate reductase 1, beta subunit [Haemophilus influenzae R2846] gi|317432405|emb|CBY80760.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus influenzae F3031] gi|317450683|emb|CBY86903.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus influenzae F3047] gi|327471465|gb|EGF16913.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus aegyptius ATCC 11116] Length = 376 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q++ + A E A+A G Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|238920521|ref|YP_002934036.1| ribonucleotide-diphosphate reductase subunit beta [Edwardsiella ictaluri 93-146] gi|238870090|gb|ACR69801.1| ribonucleoside-diphosphate reductase, beta subunit, putative [Edwardsiella ictaluri 93-146] Length = 376 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E + + +A E +A G Sbjct: 237 RDEALHLTGTQHILNLMRAGQDDPEMAEIATECASQCYDLFVQAAQQEKEWAGYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNRDILCQYVEYITNIRMQAVGLPLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|317164437|gb|ADV07978.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria gonorrhoeae TCDC-NG08107] Length = 377 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + E Q + + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101 +GLN QY+++I N R +GL F+ +NP PW++ + Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLSAGFEGANQNPIPWINAWLS 342 >gi|59711808|ref|YP_204584.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio fischeri ES114] gi|197336251|ref|YP_002156001.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio fischeri MJ11] gi|59479909|gb|AAW85696.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like protein [Vibrio fischeri ES114] gi|197317741|gb|ACH67188.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio fischeri MJ11] Length = 377 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDESLHL ++N ++ ++P E +Q+ + A E +A+ G Sbjct: 237 RDESLHLTSTQHMLNLLRTGQDDPEFVEIAAECEQECFDLFKAAAEQEKQWANYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 101 +GLN QY+++I N R +GL ++ T+NP PW++ + Sbjct: 297 MIGLNKDILCQYVEYITNLRMKAVGLNSAYEGATQNPIPWINSWLS 342 >gi|116326775|ref|YP_803312.1| hypothetical protein TNAV2c_gp089 [Trichoplusia ni ascovirus 2c] gi|102231783|gb|ABF70606.1| hypothetical protein [Trichoplusia ni ascovirus 2c] Length = 269 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 8/92 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N ++ K + +L EA ++E + + +P +G+N Sbjct: 172 RDEGLHTDFACLMYN-------YVVQKPPNSRVIEILKEAVVIEKDFLTDALPVRLLGMN 224 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPF 93 QY++F+A+R +++ E + +NP Sbjct: 225 CDLMSQYIEFVADRLLYELIGEKYYN-AKNPI 255 >gi|254361270|ref|ZP_04977413.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica PHL213] gi|153092766|gb|EDN73809.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica PHL213] Length = 376 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++P + +E +Q++ + A E A+A G Sbjct: 237 RDEALHLTGTQHILNIMAYGNDDPEMAEIARECRQEAYELFLSAAEQEKAWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL FK NP PW++ ++ + E V+ Sbjct: 297 MIGLNRDILVQYIEYITNIRMQAVGLPLPFKARSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|329119976|ref|ZP_08248648.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria bacilliformis ATCC BAA-1200] gi|327463889|gb|EGF10203.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria bacilliformis ATCC BAA-1200] Length = 384 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E Q + + +A E +A G Sbjct: 244 RDEALHLTSTQHMLNLMRAGADDPEMAEIAVELQDECFKLFKKAAEQEKEWAAYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101 +GLN QY+++I N R +GL+P F + +NP PW++ + Sbjct: 304 MIGLNKDILCQYVEYITNHRMIAVGLDPAFPASNQNPIPWINAWLS 349 >gi|76875271|emb|CAI86492.1| ribonucleoside-diphosphate reductase 1, beta subunit [Pseudoalteromonas haloplanktis TAC125] Length = 359 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL+ ++N ++ ++P + + + ++ M +A E +A G Sbjct: 220 RDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCRDEAIKMFVDAAEQEKEWAEYLFKDGS 279 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R IG FK NP PW+ S ++ + E ++ Sbjct: 280 MIGLNKHILCQYVEYITNARMTAIGFPAQFKNNSNPIPWINSWLVSDNVQVAPQEAEISS 339 Query: 116 Y 116 Y Sbjct: 340 Y 340 >gi|317492553|ref|ZP_07950980.1| ribonucleotide reductase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919303|gb|EFV40635.1| ribonucleotide reductase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 376 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E +Q+ + A E +A G Sbjct: 237 RDEALHLTGTQHILNLMRSGQDDPEMAEVAVECEQQCYDLFVLAAEQEKEWADYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLKLPFQTRSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|15602584|ref|NP_245656.1| ribonucleotide-diphosphate reductase subunit beta [Pasteurella multocida subsp. multocida str. Pm70] gi|12721013|gb|AAK02803.1| NrdB [Pasteurella multocida subsp. multocida str. Pm70] Length = 376 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q++ + A E +A G Sbjct: 237 RDEALHLTGTQHILNIMASGQDDPEMAEIVEECKQEAYDLFVAAAEQEKEWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|313668429|ref|YP_004048713.1| ribonucleoside diphosphate reductase I beta chain [Neisseria lactamica ST-640] gi|313005891|emb|CBN87347.1| ribonucleoside diphosphate reductase I beta chain [Neisseria lactamica 020-06] Length = 377 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + E Q + + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFRLFKKAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101 +GLN QY+++I N R +GL F+ +NP PW++ + Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 342 >gi|52425023|ref|YP_088160.1| ribonucleotide-diphosphate reductase subunit beta [Mannheimia succiniciproducens MBEL55E] gi|52307075|gb|AAU37575.1| NrdF protein [Mannheimia succiniciproducens MBEL55E] Length = 376 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q++ + A E A+A G Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQEKAWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 +GLN QY+++I N R +GL F+ NP PW++ + Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWINAWL 340 >gi|58532963|ref|YP_195186.1| ribonucleotide reductase A subunit [Synechococcus phage S-PM2] gi|58331430|emb|CAF34216.1| ribonucleotide reductase A subunit [Synechococcus phage S-PM2] Length = 394 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVINQIKI-ENPHLWTKEFQQK--SRTMLHEATLLEIAYAHETMPKG-F 57 RDES H+ ++IN+ K ++P + Q++ M + EI +A G Sbjct: 254 RDESQHMTITQNIINKWKAGDDPDMVEIAKQEENNVYDMFKKCVEEEIIWADYLFRDGSM 313 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114 +GLNA ++Y+++ ANRR IG++ +F + NP PW + K + ET V Sbjct: 314 IGLNAKLLQKYVEWTANRRMKAIGMKQIFDVPLSNNPLPWTEHWLSSKGLQVAPQETEVE 373 Query: 115 EYQQGA 120 Y G Sbjct: 374 SYVIGG 379 >gi|85059563|ref|YP_455265.1| ribonucleotide-diphosphate reductase subunit beta [Sodalis glossinidius str. 'morsitans'] gi|84780083|dbj|BAE74860.1| ribonucleoside-diphosphate reductase 1 beta subunit [Sodalis glossinidius str. 'morsitans'] Length = 376 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E QQ+S + A E +A G Sbjct: 237 RDEALHLTSTQHMLNLMRSGEDDPEMAEIARECQQESYDLFLLAAQQEKEWASYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F NP PW+ S ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQSVGLDLPFATRSNPIPWINSWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|320538993|ref|ZP_08038668.1| putative ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like protein [Serratia symbiotica str. Tucson] gi|320030926|gb|EFW12930.1| putative ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like protein [Serratia symbiotica str. Tucson] Length = 376 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGADDPEMAEIAVECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I+N R +GLE FK NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYISNIRMQAVGLELPFKTRSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|269213593|ref|ZP_05982340.2| ribonucleoside-diphosphate reductase, beta subunit [Neisseria cinerea ATCC 14685] gi|269146056|gb|EEZ72474.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria cinerea ATCC 14685] Length = 377 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++P + +E Q++ + +A E +A G Sbjct: 237 RDEALHLTSTQHMLNLMRSGVDDPEMAEIAEELQEECFKLFKKAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101 +GLN QY+++I N R +GL F+ +NP PW++ + Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPIGFEGANQNPIPWINAWLS 342 >gi|162139926|ref|YP_339935.2| ribonucleotide-diphosphate reductase subunit beta [Pseudoalteromonas haloplanktis TAC125] Length = 376 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL+ ++N ++ ++P + + + ++ M +A E +A G Sbjct: 237 RDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCRDEAIKMFVDAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R IG FK NP PW+ S ++ + E ++ Sbjct: 297 MIGLNKHILCQYVEYITNARMTAIGFPAQFKNNSNPIPWINSWLVSDNVQVAPQEAEISS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|51557509|ref|YP_068343.1| ribonucleotide reductase subunit 2 [Suid herpesvirus 1] gi|1710400|sp|P50645|RIR2_SUHVK RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|437737|emb|CAA50977.1| ribonucleotide reductase [Suid herpesvirus 1] gi|525265|emb|CAA56776.1| ribonucleotid reductase, small subunit [Suid herpesvirus 1] gi|40253968|tpg|DAA02163.1| TPA_exp: small subunit of ribonucleotide reductase [Suid herpesvirus 1] gi|1090510|prf||2019240B ribonucleotide reductase:SUBUNIT=small Length = 303 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 4/115 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + + N + P + + + + EA +E + P+ + L+ Sbjct: 185 RDEAIHTSASCCIYNNYLGDAP----RPDEARIHQLFAEAVEIECEFLRARAPRDSLLLD 240 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 P+ Y+++ A+R IG PLF + ++ +K NFFE R T Y Sbjct: 241 LPAIISYVRYSADRLLQAIGASPLFGAPAPAADFPMALMVAEKHTNFFERRSTNY 295 >gi|326784150|ref|YP_004324543.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn1] gi|310004882|gb|ADO99273.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn1] Length = 395 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 7/126 (5%) Query: 2 RDESLHLNFGIDVINQIKI-ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 RDES H+ +++N+ K ++P + +E ++ M ++ E+ +A G Sbjct: 255 RDESQHMTITQNILNKWKQGDDPDMVEIAQEEEKNVYEMFNKCVEEEVIWADYLFRDGSM 314 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEKNF-FETRVT 114 +GLNA ++Y+++ ANRR IGL+P F + NP PW + + + ET V Sbjct: 315 IGLNAKLLQKYVEWTANRRMKSIGLKPTFDAPLSNNPLPWTEHWLSSRGLQVAPQETEVE 374 Query: 115 EYQQGA 120 Y G Sbjct: 375 SYVIGG 380 >gi|261364564|ref|ZP_05977447.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria mucosa ATCC 25996] gi|288567131|gb|EFC88691.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria mucosa ATCC 25996] Length = 384 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E Q + + +A E +A G Sbjct: 244 RDEALHLTSTQHMLNLMRAGSDDPEMAEIAVELQDECFELFKKAAEQEKEWAAYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 101 +GLN QY+++I N R +GL F+ T+NP PW++ + Sbjct: 304 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLS 349 >gi|4389291|pdb|1BIQ|A Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain Mutant E238a Length = 375 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RD +LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDAALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 356 YLVGQIDSEVDTD 368 >gi|294140834|ref|YP_003556812.1| ribonucleoside-diphosphate reductase subunit beta [Shewanella violacea DSS12] gi|293327303|dbj|BAJ02034.1| ribonucleoside-diphosphate reductase, beta subunit [Shewanella violacea DSS12] Length = 376 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN ++ ++ ++P + KE +Q + + +A E +A G Sbjct: 237 RDEALHLNSTQHILKIMRAGADDPEMGEIAKECEQLAYDIFVKAAEQEKEWAQYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 +GLN QY+++I N R + L + NP PWM + Sbjct: 297 MIGLNQAILCQYVEYITNERMKSVNLPCHYDEITNPLPWMKNWL 340 >gi|293392273|ref|ZP_06636607.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952807|gb|EFE02926.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter actinomycetemcomitans D7S-1] Length = 376 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q++ + A E +A G Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAKIAEECKQEAYDLFLAAAEQEKDWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|238760194|ref|ZP_04621340.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia aldovae ATCC 35236] gi|238701573|gb|EEP94144.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia aldovae ATCC 35236] Length = 376 Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHILNLMRAGEDDPEMAEIAIECQQQCYDLFVLAAEQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F NP PW+ S ++ + E V+ Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGIPFATRTNPIPWINSWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQIDSEISAD 369 >gi|319638203|ref|ZP_07992966.1| ribonucleoside diphosphate reductase subunit I beta [Neisseria mucosa C102] gi|317400476|gb|EFV81134.1| ribonucleoside diphosphate reductase subunit I beta [Neisseria mucosa C102] Length = 384 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E Q + + +A E +A G Sbjct: 244 RDEALHLTSTQHMLNLMRAGADDPEMAEIANELQDECFNLFKKAAEQEKEWAAYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 101 +GLN QY+++I N R +GL F+ T+NP PW++ + Sbjct: 304 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLS 349 >gi|4389292|pdb|1BIQ|B Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain Mutant E238a gi|40889714|pdb|1RSV|A Chain A, Azide Complex Of The Diferrous E238a Mutant R2 Subunit Of Ribonucleotide Reductase gi|40889715|pdb|1RSV|B Chain B, Azide Complex Of The Diferrous E238a Mutant R2 Subunit Of Ribonucleotide Reductase Length = 375 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RD +LHL ++N ++ ++P + +E +Q+ + +A E +A G Sbjct: 236 RDAALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 356 YLVGQIDSEVDTD 368 >gi|167623961|ref|YP_001674255.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella halifaxensis HAW-EB4] gi|167353983|gb|ABZ76596.1| Ribonucleoside-diphosphate reductase [Shewanella halifaxensis HAW-EB4] Length = 376 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN ++ ++ ++P + KE +Q + + +A E +A G Sbjct: 237 RDEALHLNSTQHILKIMQGGKDDPEMAEIAKECEQTAIDIFVKAAEQEKEWAKYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115 +GLN QY+++I N R + + NP PWM ++ + E V+ Sbjct: 297 MIGLNETILCQYVEYITNERMKSVNFASPYAEQTNPLPWMKNWLESDSVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q + + D Sbjct: 357 YLVGQIDSSIDDD 369 >gi|157371509|ref|YP_001479498.1| ribonucleotide-diphosphate reductase subunit beta [Serratia proteamaculans 568] gi|157323273|gb|ABV42370.1| Ribonucleoside-diphosphate reductase [Serratia proteamaculans 568] Length = 376 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGADDPEMAEIAVECQQQCYDLFVLAAEQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGLPFATRSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|261867684|ref|YP_003255606.1| ribonucleotide-diphosphate reductase subunit beta [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413016|gb|ACX82387.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter actinomycetemcomitans D11S-1] Length = 376 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q++ + A E +A G Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQEKDWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|294637129|ref|ZP_06715438.1| ribonucleoside-diphosphate reductase, beta subunit [Edwardsiella tarda ATCC 23685] gi|291089663|gb|EFE22224.1| ribonucleoside-diphosphate reductase, beta subunit [Edwardsiella tarda ATCC 23685] Length = 376 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E + + + +A E +A G Sbjct: 237 RDEALHLTGTQHILNLMRSGQDDPEMAEIAAECETQCYDLFVQAAQQEKDWASYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNRDILCQYVEYITNIRMQAVGLSLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|284799957|ref|ZP_05985309.2| ribonucleoside-diphosphate reductase, beta subunit [Neisseria subflava NJ9703] gi|284796454|gb|EFC51801.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria subflava NJ9703] Length = 377 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E Q + + +A E +A G Sbjct: 237 RDEALHLTSTQHMLNLMRAGADDPEMAEIANELQDECFNLFKKAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 101 +GLN QY+++I N R +GL F+ T+NP PW++ + Sbjct: 297 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLS 342 >gi|260913913|ref|ZP_05920387.1| ribonucleoside-diphosphate reductase [Pasteurella dagmatis ATCC 43325] gi|260632000|gb|EEX50177.1| ribonucleoside-diphosphate reductase [Pasteurella dagmatis ATCC 43325] Length = 376 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q++ + A E +A G Sbjct: 237 RDEALHLTGTQHILNIMASGQDDPEMAEIVEECKQEAYDLFVAAAEQEKEWASYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|145634465|ref|ZP_01790175.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus influenzae PittAA] gi|229845068|ref|ZP_04465204.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae 6P18H1] gi|229846892|ref|ZP_04466999.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae 7P49H1] gi|145268445|gb|EDK08439.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus influenzae PittAA] gi|229810381|gb|EEP46100.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae 7P49H1] gi|229812040|gb|EEP47733.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae 6P18H1] Length = 376 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + L +E +Q++ + A E A+A G Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDLEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|9629745|ref|NP_045237.1| ribonucleotide reductase subunit 2 [Equid herpesvirus 4] gi|2605963|gb|AAC59535.1| 20 [Equid herpesvirus 4] Length = 320 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 4/116 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H N + N + K + + EA +E + PK L+ Sbjct: 202 RDEAIHTNASCCIYNNYLGG----FEKPAPTRIYALFSEAVNIECEFLLSHAPKSTHLLD 257 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + Y+++ A+R +IGL PLF + P + + ++K NFFE R T Y Sbjct: 258 IEAIICYVRYSADRLLGEIGLSPLFNAPKPPPSFPLAFMTVEKHTNFFERRSTAYS 313 >gi|225075859|ref|ZP_03719058.1| hypothetical protein NEIFLAOT_00882 [Neisseria flavescens NRL30031/H210] gi|224952805|gb|EEG34014.1| hypothetical protein NEIFLAOT_00882 [Neisseria flavescens NRL30031/H210] Length = 388 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E Q + + +A E +A G Sbjct: 248 RDEALHLTSTQHMLNLMRAGADDPEMAEIANELQDECFNLFKKAAEQEKEWAAYLFKDGS 307 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 101 +GLN QY+++I N R +GL F+ T+NP PW++ + Sbjct: 308 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLS 353 >gi|270262779|ref|ZP_06191050.1| ribonucleoside-diphosphate reductase 1 subunit beta [Serratia odorifera 4Rx13] gi|270043463|gb|EFA16556.1| ribonucleoside-diphosphate reductase 1 subunit beta [Serratia odorifera 4Rx13] Length = 359 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E QQ+ + A E +A G Sbjct: 220 RDEALHLTGTQHILNLMRSGADDPEMAEIAVECQQQCYDLFVLAAQQEKEWAEYLFRDGS 279 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F+ NP PW++ ++ + E V+ Sbjct: 280 MIGLNKDILCQYVEYITNIRMQAVGLGLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 339 Query: 116 Y 116 Y Sbjct: 340 Y 340 >gi|126174279|ref|YP_001050428.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella baltica OS155] gi|125997484|gb|ABN61559.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Shewanella baltica OS155] Length = 376 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN +++ ++ ++P + E QQ++ + +A E +A G Sbjct: 237 RDEALHLNSTQHILSIMQGGKDDPEMGEIAAECQQEAFDLFFKAAEQEKEWAKYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 +GLN QY++FI N+R + L + NP PWM + Sbjct: 297 MIGLNEQILCQYVEFITNQRMKSVNLPQPYLEITNPLPWMKNWL 340 >gi|251792451|ref|YP_003007177.1| ribonucleotide-diphosphate reductase subunit beta [Aggregatibacter aphrophilus NJ8700] gi|315634378|ref|ZP_07889665.1| ribonucleotide-diphosphate reductase beta subunit [Aggregatibacter segnis ATCC 33393] gi|247533844|gb|ACS97090.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter aphrophilus NJ8700] gi|315476968|gb|EFU67713.1| ribonucleotide-diphosphate reductase beta subunit [Aggregatibacter segnis ATCC 33393] Length = 376 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q++ + A E +A G Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQEKDWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F+ NP PW++ ++ + E V+ Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|293395206|ref|ZP_06639492.1| ribonucleoside-diphosphate reductase [Serratia odorifera DSM 4582] gi|291422383|gb|EFE95626.1| ribonucleoside-diphosphate reductase [Serratia odorifera DSM 4582] Length = 376 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGADDPEMAEIAVECQQQCYDLFVLAAQQEKEWAEYLFSGGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL FK NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGAPFKTRSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQIDSEINAD 369 >gi|148653376|ref|YP_001280469.1| ribonucleotide-diphosphate reductase subunit beta [Psychrobacter sp. PRwf-1] gi|148572460|gb|ABQ94519.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Psychrobacter sp. PRwf-1] Length = 377 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 7/122 (5%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +IN + ++P + + + +S + +A E +A G Sbjct: 237 RDEALHLTSTQHMINIMASGKDDPEMAEISAQCHNESIEIFRKAAEQEKEWAGYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS-EVIDLKKEKNFFETRVT 114 +GLN QY+++I N R +GL +F ++ NP PW++ + + ET ++ Sbjct: 297 MIGLNKDILCQYVEYITNLRMEAVGLPGIFPESKSNPIPWINTWLSSDNVQVAPQETEIS 356 Query: 115 EY 116 Y Sbjct: 357 SY 358 >gi|117920413|ref|YP_869605.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp. ANA-3] gi|117612745|gb|ABK48199.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Shewanella sp. ANA-3] Length = 391 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDV--INQIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN + I Q ++P + E QQ++ + +A E +A G Sbjct: 252 RDEALHLNSTQHILTIMQGGKDDPEMAEIAAECQQEAYNLFLKAAEQEKEWAKYLFKDGS 311 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 +GLN QY+++I N+R + L + NP PWM + Sbjct: 312 MIGLNEQILCQYVEYITNQRMKSVNLPLPYAELSNPLPWMKNWL 355 >gi|24373963|ref|NP_718006.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella oneidensis MR-1] gi|24348405|gb|AAN55450.1|AE015682_5 ribonucleoside-diphosphate reductase, beta subunit [Shewanella oneidensis MR-1] Length = 376 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDV--INQIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN + I Q ++P + E QQ++ + +A E +A G Sbjct: 237 RDEALHLNSTQHILTIMQGGKDDPEMGEIAIECQQEAYNLFLKAAEQEKEWAKYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 +GLN QY+++I N+R + L + NP PWM + Sbjct: 297 MIGLNEQILCQYVEYITNQRMKSVNLPQPYAEQTNPLPWMKNWL 340 >gi|298368555|ref|ZP_06979873.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sp. oral taxon 014 str. F0314] gi|298282558|gb|EFI24045.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sp. oral taxon 014 str. F0314] Length = 384 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E Q + + +A E +A G Sbjct: 244 RDEALHLTSTQHMLNLMRAGADDPEMAEIAVELQDECFKLFKKAAEQEKEWAAYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 101 +GLN QY+++I N R +GL F+ T+NP PW++ + Sbjct: 304 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLS 349 >gi|255065945|ref|ZP_05317800.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sicca ATCC 29256] gi|255049856|gb|EET45320.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sicca ATCC 29256] Length = 377 Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E Q + + +A E +A G Sbjct: 237 RDEALHLTSTQHMLNLMRAGSDDPEMAEIAVELQDECFKLFKKAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 101 +GLN QY+++I N R +GL F+ T+NP PW++ + Sbjct: 297 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLS 342 >gi|91775577|ref|YP_545333.1| ribonucleotide-diphosphate reductase subunit beta [Methylobacillus flagellatus KT] gi|91709564|gb|ABE49492.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Methylobacillus flagellatus KT] Length = 377 Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 6/105 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P E Q + M A E +A G Sbjct: 237 RDEALHLTGTQHMLNIMRSGQDDPEFAGIASELQDECFEMFKRAAEQEKKWADYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVI 100 +GLN QY+++I N R +GL F + NP PW++ + Sbjct: 297 MIGLNRDILCQYVEYITNNRMASVGLSAAFPNAKNNPIPWINTWL 341 >gi|119944866|ref|YP_942546.1| ribonucleotide-diphosphate reductase subunit beta [Psychromonas ingrahamii 37] gi|119863470|gb|ABM02947.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Psychromonas ingrahamii 37] Length = 381 Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN ++N ++P + E + R + +A E +A G Sbjct: 242 RDEALHLNSTQQILNLWADGKDDPEMAEIAIECFAEGREIFLQAAQQEKDWAKYLFKDGS 301 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++IAN R IG P F+ NP PW+ + ++ + ET ++ Sbjct: 302 MIGLNEQILSQYVEYIANLRMQAIGYAPEFEVKSNPIPWINNWLVSDNVQVAPQETEISS 361 Query: 116 Y 116 Y Sbjct: 362 Y 362 >gi|241760495|ref|ZP_04758588.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria flavescens SK114] gi|241318999|gb|EER55501.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria flavescens SK114] Length = 377 Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E Q + + +A E +A G Sbjct: 237 RDEALHLTSTQHMLNLMRAGADDPEMAEIAVELQDECFKLFKKAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 101 +GLN QY+++I N R +GL F+ T+NP PW++ + Sbjct: 297 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLS 342 >gi|297250515|ref|ZP_06864465.2| ribonucleoside-diphosphate reductase, beta subunit [Neisseria polysaccharea ATCC 43768] gi|296838835|gb|EFH22773.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria polysaccharea ATCC 43768] Length = 377 Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++ + E Q + + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101 +GLN QY+++I N R +GL F+ +NP PW++ + Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 342 >gi|91793308|ref|YP_562959.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella denitrificans OS217] gi|91715310|gb|ABE55236.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Shewanella denitrificans OS217] Length = 376 Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN ++ ++ ++P + E QQ++ + ++A E +A G Sbjct: 237 RDEALHLNSTQHILALMQGGKDDPEMAEIAIECQQQAYDLFYKAAEQEKEWAKYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 +GLN QY+++I N+R + L + NP PWM + Sbjct: 297 MIGLNEQILCQYVEYITNQRMKSVHLPQPYAEISNPLPWMKNWL 340 >gi|7226528|gb|AAF41664.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis MC58] gi|254670476|emb|CBA06168.1| ribonucleoside-diphosphate reductase beta chain [Neisseria meningitidis alpha153] Length = 384 Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++ + E Q + + +A E +A G Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101 +GLN QY+++I N R +GL F+ +NP PW++ + Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 349 >gi|238794995|ref|ZP_04638591.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia intermedia ATCC 29909] gi|238725698|gb|EEQ17256.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia intermedia ATCC 29909] Length = 376 Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHILNLMRSGEDDPEMAEIAIECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL F NP PW+ S ++ + E V+ Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGVPFATRTNPIPWINSWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQIDSEVSAD 369 >gi|161353784|ref|NP_274308.2| ribonucleotide-diphosphate reductase subunit beta [Neisseria meningitidis MC58] gi|304387414|ref|ZP_07369605.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria meningitidis ATCC 13091] gi|304338507|gb|EFM04626.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria meningitidis ATCC 13091] gi|316984078|gb|EFV63056.1| ribonucleoside-diphosphate reductase 1 subunit beta [Neisseria meningitidis H44/76] gi|325134468|gb|EGC57113.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis M13399] gi|325140485|gb|EGC63006.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis CU385] gi|325144569|gb|EGC66868.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis M01-240013] gi|325200084|gb|ADY95539.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis H44/76] gi|325204292|gb|ADY99745.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis M01-240355] gi|325205936|gb|ADZ01389.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis M04-240196] Length = 377 Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++ + E Q + + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101 +GLN QY+++I N R +GL F+ +NP PW++ + Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 342 >gi|319410557|emb|CBY90925.1| ribonucleoside-diphosphate reductase beta subunit (ribonucleotide reductase) [Neisseria meningitidis WUE 2594] gi|325208250|gb|ADZ03702.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis NZ-05/33] Length = 384 Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++ + E Q + + +A E +A G Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101 +GLN QY+++I N R +GL F+ +NP PW++ + Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 349 >gi|1710396|sp|P50644|RIR2_EHV4 RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|515833|emb|CAA53101.1| ribonucleoside-diphosphate reductase [Equid herpesvirus 4] Length = 320 Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 4/116 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H N + N + K + + EA +E + PK L+ Sbjct: 202 RDEAIHTNASCCIYNNYLGG----FEKPAPTRIYALFSEAVNIECEFLLSHAPKSSHLLD 257 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + Y+++ A+R +IGL PLF + P + + ++K NFFE R T Y Sbjct: 258 IEAIICYVRYSADRLLGEIGLSPLFNAPKPPPSFPLAFMTVEKHTNFFERRSTAYS 313 >gi|124487872|gb|ABN12019.1| putative ribonucleotide reductase R2 subunit [Maconellicoccus hirsutus] Length = 249 Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 44/94 (46%), Gaps = 8/94 (8%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63 ESL+ +F + + L + ++ ++ EA ++E ++ + +P +G++ Sbjct: 127 ESLYTDFACLLFKR-------LVQRPSVEEITEIIREAVIIEQEFSTKGLPVSLIGMDCE 179 Query: 64 SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 Y++F+A+R + +F NPF +M Sbjct: 180 LMTTYIEFVADRLLQALNCPKVF-GVPNPFGFME 212 >gi|218768312|ref|YP_002342824.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria meningitidis Z2491] gi|121052320|emb|CAM08650.1| ribonucleoside diphosphate reductase I beta chain [Neisseria meningitidis Z2491] gi|261392428|emb|CAX49973.1| ribonucleoside-diphosphate reductase beta subunit (ribonucleotide reductase) [Neisseria meningitidis 8013] Length = 377 Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++ + E Q + + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101 +GLN QY+++I N R +GL F+ +NP PW++ + Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 342 >gi|127512873|ref|YP_001094070.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella loihica PV-4] gi|126638168|gb|ABO23811.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Shewanella loihica PV-4] Length = 376 Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN ++ ++ ++P + KE +Q + + +A E +A G Sbjct: 237 RDEALHLNSTQHILKLMQGGKDDPEMAEIAKECEQTAIDIFVKAAEQEKEWAKYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 +GLN QY+++I N R + L + NP PWM + Sbjct: 297 MIGLNEQILCQYVEYITNERMKSVNLVSPYADQSNPLPWMKNWL 340 >gi|161870162|ref|YP_001599332.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria meningitidis 053442] gi|161595715|gb|ABX73375.1| ribonucleoside diphosphate reductase I beta chain [Neisseria meningitidis 053442] Length = 384 Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++ + E Q + + +A E +A G Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101 +GLN QY+++I N R +GL F+ +NP PW++ + Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 349 >gi|330949820|gb|EGH50080.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae Cit 7] Length = 359 Score = 99.3 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 41/69 (59%), Positives = 54/69 (78%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+ Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKKEATQMILQGTQLEIEYARDTMPRGVLGM 350 Query: 61 NAPSCEQYM 69 NA E Y+ Sbjct: 351 NAAMMEDYL 359 >gi|308389409|gb|ADO31729.1| ribonucleoside diphosphate reductase I beta chain [Neisseria meningitidis alpha710] Length = 384 Score = 99.3 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++ + E Q + + +A E +A G Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101 +GLN QY+++I N R +GL F+ +NP PW++ + Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 349 >gi|254805092|ref|YP_003083313.1| ribonucleoside-diphosphate reductase beta chain [Neisseria meningitidis alpha14] gi|254668634|emb|CBA06257.1| ribonucleoside-diphosphate reductase beta chain [Neisseria meningitidis alpha14] Length = 384 Score = 99.3 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++ + E Q + + +A E +A G Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101 +GLN QY+++I N R +GL F+ +NP PW++ + Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 349 >gi|121635003|ref|YP_975248.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria meningitidis FAM18] gi|120866709|emb|CAM10461.1| ribonucleoside diphosphate reductase I beta chain [Neisseria meningitidis FAM18] gi|325128288|gb|EGC51172.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis N1568] gi|325130346|gb|EGC53112.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis OX99.30304] gi|325132508|gb|EGC55201.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis M6190] gi|325136206|gb|EGC58814.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis M0579] gi|325138282|gb|EGC60851.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis ES14902] gi|325142424|gb|EGC64828.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis 961-5945] gi|325198443|gb|ADY93899.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis G2136] gi|325201998|gb|ADY97452.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis M01-240149] Length = 377 Score = 99.3 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++ + E Q + + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101 +GLN QY+++I N R +GL F+ +NP PW++ + Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 342 >gi|157961884|ref|YP_001501918.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella pealeana ATCC 700345] gi|157846884|gb|ABV87383.1| Ribonucleoside-diphosphate reductase [Shewanella pealeana ATCC 700345] Length = 376 Score = 99.3 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN ++ ++P + KE +Q + + +A E +A G Sbjct: 237 RDEALHLNSTQHILKIMHAGKDDPEMAEIAKECEQTAIDIFIKAAEQEKEWAKYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 +GLN QY+++I N R + + NP PWM + Sbjct: 297 MIGLNETILCQYVEYITNERMKAVNFASPYAEQTNPLPWMKNWL 340 >gi|209695249|ref|YP_002263178.1| ribonucleotide-diphosphate reductase subunit beta [Aliivibrio salmonicida LFI1238] gi|208009201|emb|CAQ79455.1| ribonucleoside-diphosphate reductase 1 beta chain [Aliivibrio salmonicida LFI1238] Length = 377 Score = 99.3 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P E +Q + A E +A+ G Sbjct: 237 RDEALHLTSTQHMVNLLRTGQDDPEFVEIAAECEQDCFDLFKAAAEQEKEWANYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 101 +GLN QY+++I N R +GL + T+NP PW++ + Sbjct: 297 MIGLNKDILCQYVEYITNLRMKAVGLSGAYDGATQNPIPWINSWLS 342 >gi|221316490|ref|ZP_03598295.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus subtilis subsp. subtilis str. NCIB 3610] Length = 347 Score = 99.3 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 6/129 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++ I + P L T+EF + E LE + + + K ++ Sbjct: 218 RDEMKHSYFQTILVRDILTQYPELNTEEFSEFVYDFFTELVQLEREFCED-LYKNTPDID 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEV--IDLKK-EKNFFETRVTEYQQ 118 ++Y+ + AN +GL+ +F +NP PW++ +L +++FFE + Y + Sbjct: 277 IEEVKEYIGYRANLILDNLGLDQIFSAKKNPMPWITAFDPDNLNNTKRDFFEDKEVNYGK 336 Query: 119 GAEL--KWD 125 E WD Sbjct: 337 ANEQKNDWD 345 >gi|323650974|ref|YP_004243617.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus subtilis subsp. natto] gi|323461614|dbj|BAJ77030.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus subtilis subsp. natto] Length = 347 Score = 99.3 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 4/127 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H F ++ I + P L T+EF + E LE + + + K ++ Sbjct: 218 RDEMKHSYFQTILVRDILTQYPELNTEEFSEFVYDFFTELVQLEREFCED-LYKNTPDID 276 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEV--IDLKK-EKNFFETRVTEYQQ 118 ++Y+ + AN +GL+ +F +NP PW++ +L +++FFE + Y + Sbjct: 277 IEEVKEYIGYRANLILDNLGLDQIFAAKKNPMPWITAFDPDNLNNTKRDFFEDKEVNYGK 336 Query: 119 GAELKWD 125 E K D Sbjct: 337 ANEQKND 343 >gi|12084869|ref|NP_073334.1| ribonucleotide reductase subunit 2 [Meleagrid herpesvirus 1] gi|11095873|gb|AAG30080.1|AF282130_43 UL40 ribonucleotide reductase small subunit [Meleagrid herpesvirus 1] gi|12025152|gb|AAG45778.1|AF291866_45 UL40 ribonucleotide reductase, small subunit [Meleagrid herpesvirus 1] Length = 355 Score = 99.3 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 7/124 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+ + K + T+ EA LE + P+ +N Sbjct: 238 RDEAIHVEASCCIFKNYLAGP-----KPTTARIHTLFKEAVRLECEFLRTAAPRTSNIIN 292 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y+++ A+R + + P++ + P + ++ NFFE R T Y Sbjct: 293 IDAICSYVRYSADRLLRALDILPIYDEPKPPADFPLVLMSAASNTNFFERRNTAY--SGS 350 Query: 122 LKWD 125 + D Sbjct: 351 VSND 354 >gi|10834911|ref|NP_066872.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 3] gi|5102912|dbj|BAA78729.1| UL40 protein [Marek's disease virus serotype 2 MDV2] gi|5689312|dbj|BAA82936.1| UL40 product homolog [Marek's disease virus serotype 2 MDV2] gi|10800005|dbj|BAB16550.1| UL40 protein [Gallid herpesvirus 3] Length = 353 Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 7/124 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+ + N K + + + EA LE A+ P+ L+ Sbjct: 236 RDEAIHVEASCCIFKNYIAGN-----KPSTARIQALFSEAVDLECAFLRAAAPRDSRLLD 290 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 S Y+++ A+R + + P++ + ++ NFFE R T Y Sbjct: 291 IGSICSYVRYSADRLLRMLDVPPIYGEPSPAADFPLSLMSASNNTNFFERRSTAY--SGS 348 Query: 122 LKWD 125 + D Sbjct: 349 VSND 352 >gi|209523562|ref|ZP_03272116.1| ribonucleoside-diphosphate reductase beta chain [Arthrospira maxima CS-328] gi|209495967|gb|EDZ96268.1| ribonucleoside-diphosphate reductase beta chain [Arthrospira maxima CS-328] Length = 112 Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 8/103 (7%) Query: 31 QQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---K 87 Q + M A E + + + +G+ S EQY +++AN R IGLE L+ K Sbjct: 8 QDRIYEMFDAAVQHECRWTNHIVGNNILGITEHSTEQYTKYLANIRLRSIGLESLYSDPK 67 Query: 88 YTENPFPWMSEVIDLKK----EKNFFETRVTEYQQGAELK-WD 125 Y ++P+ + D KK + NFFE VT Y + + WD Sbjct: 68 YQKSPYTHLERFSDTKKEAHTKANFFEASVTSYVMSSGVSGWD 110 >gi|33519930|ref|NP_878762.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Blochmannia floridanus] gi|33504276|emb|CAD83168.1| ribonucleoside-diphosphate reductase 1 beta chain [Candidatus Blochmannia floridanus] Length = 376 Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 5/105 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLWTKEF--QQKSRTMLHEATLLEIAYAHETMPKG- 56 RDESLHLN ++N ++ ++P + Q++S + A E +AH G Sbjct: 237 RDESLHLNATQHILNLMRSGSDDPEMVDISLICQEESYNLFLMAAEQEKTWAHYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101 +GLN QY+++I N R IGL+ F N PW++ + Sbjct: 297 MIGLNKEILCQYIEYITNIRMQAIGLKTPFNTKTNSIPWINAWLS 341 >gi|225023977|ref|ZP_03713169.1| hypothetical protein EIKCOROL_00844 [Eikenella corrodens ATCC 23834] gi|224943002|gb|EEG24211.1| hypothetical protein EIKCOROL_00844 [Eikenella corrodens ATCC 23834] Length = 384 Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E + + +A E +A G Sbjct: 244 RDEALHLTSTQHMLNLMRSGTDDPEMAEIAAELENDCFELFKKAAEQEKEWAEYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID 101 +GLN QY+++I N R +GL F T+NP PW++ + Sbjct: 304 MIGLNKDILCQYVEYITNHRMMAVGLNAAFPAATQNPIPWINAWLS 349 >gi|125745092|ref|YP_001033969.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 2] gi|327488446|sp|Q77MS0|RIR2_GAHVM RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|7673151|gb|AAF66775.1|AF147806_39 ribonucleotide reductase small subunit [Gallid herpesvirus 2] gi|10180745|gb|AAG14233.1|AF243438_48 UL40 ribonucleotide reductase small subunit-like protein [Gallid herpesvirus 2] gi|104304005|gb|ABF72280.1| HSV-1 UL40-like protein [Gallid herpesvirus 2] gi|148806369|gb|ABR13125.1| UL40 [Gallid herpesvirus 2] gi|194346388|gb|ACF49570.1| UL40 [synthetic construct] gi|194750382|gb|ACF94859.1| UL40 [Gallid herpesvirus 2] gi|237626230|gb|ACR02753.1| UL40 [synthetic construct] gi|237626404|gb|ACR02926.1| UL40 [synthetic construct] Length = 343 Score = 98.6 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 50/124 (40%), Gaps = 7/124 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+ + + K + + + EA +E A+ P+ L+ Sbjct: 226 RDEAIHVEASCCIFKNYL-----MGPKPSIGRVQELFKEAVQIECAFLRTAAPRNSQLLD 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y+++ A+R ++ + P++ + + ++ NFFE R T Y Sbjct: 281 VEAICSYVRYSADRLLKELDMPPIYNEPKPTADFPLALMTASNNTNFFERRNTAY--SGS 338 Query: 122 LKWD 125 + D Sbjct: 339 VSND 342 >gi|71892252|ref|YP_277986.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796358|gb|AAZ41109.1| ribonucleoside-diphosphate reductase 1, beta subunit [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 376 Score = 98.6 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 5/105 (4%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN ++N ++ ++P + E QQ+S + A E +A+ G Sbjct: 237 RDEALHLNATQHILNLMRSGSDDPEMADISTECQQESYALFLMAAEQEKNWANYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101 +GLN QY+++I N R IGL F N PW++ + Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAIGLRTPFNIKSNVIPWINSWLS 341 >gi|190150315|ref|YP_001968840.1| ribonucleoside-diphosphate reductase subunit beta [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303253584|ref|ZP_07339722.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307245900|ref|ZP_07527985.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307247988|ref|ZP_07530018.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307254872|ref|ZP_07536697.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259315|ref|ZP_07541044.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307263658|ref|ZP_07545269.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189915446|gb|ACE61698.1| ribonucleoside-diphosphate reductase subunit beta [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302647504|gb|EFL77722.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306853260|gb|EFM85480.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306855503|gb|EFM87676.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306862169|gb|EFM94138.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866682|gb|EFM98541.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306871035|gb|EFN02768.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 376 Score = 98.6 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE LHL +++N I ++P + +E +Q++ + A E +A G Sbjct: 237 RDEYLHLTGTQNMLNIIASGQDDPEMAEIAEECKQEAYDLFVAAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN +Y+++I N R +GL F + NP PW++ ++ + E V+ Sbjct: 297 MIGLNEDILVKYVEYITNIRMQAVGLPRPFAASSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|126208467|ref|YP_001053692.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus pleuropneumoniae L20] gi|165976419|ref|YP_001652012.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303251074|ref|ZP_07337260.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307250239|ref|ZP_07532194.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307252630|ref|ZP_07534523.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307261475|ref|ZP_07543145.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|126097259|gb|ABN74087.1| ribonucleoside-diphosphate reductase subunit beta [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165876520|gb|ABY69568.1| ribonucleoside-diphosphate reductase, beta chain [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302650084|gb|EFL80254.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306857725|gb|EFM89826.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306859875|gb|EFM91895.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306868827|gb|EFN00634.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 376 Score = 98.2 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE LHL +++N I ++P + +E +Q++ + A E +A G Sbjct: 237 RDEYLHLTGTQNMLNIIASGQDDPEMAEIAEECKQEAYDLFVAAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN +Y+++I N R +GL F + NP PW++ ++ + E V+ Sbjct: 297 MIGLNEDILVKYVEYITNIRMQAVGLPRPFAASSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|307257037|ref|ZP_07538813.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306864521|gb|EFM96428.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 376 Score = 98.2 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE LHL +++N I ++P + +E +Q++ + A E +A G Sbjct: 237 RDEYLHLTGTQNMLNIIASGQDDPEMAEIAEECKQEAYDLFVAAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN +Y+++I N R +GL F NP PW++ ++ + E V+ Sbjct: 297 MIGLNEDILVKYVEYITNIRMQAVGLPRPFATASNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|237808189|ref|YP_002892629.1| ribonucleotide-diphosphate reductase subunit beta [Tolumonas auensis DSM 9187] gi|237500450|gb|ACQ93043.1| ribonucleotide reductase [Tolumonas auensis DSM 9187] Length = 377 Score = 98.2 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + +E + + +A E +A G Sbjct: 237 RDEALHLTGTQHMLNILREGNDDPEMAEIARELHDECFALFKKAAEQEKEWASYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101 +GLN QY++FI N R +GL F +NP PW++ ++ Sbjct: 297 MLGLNKDILCQYVEFITNVRMQGVGLPLAFDADRQNPLPWINTWLN 342 >gi|322832009|ref|YP_004212036.1| Ribonucleoside-diphosphate reductase [Rahnella sp. Y9602] gi|321167210|gb|ADW72909.1| Ribonucleoside-diphosphate reductase [Rahnella sp. Y9602] Length = 376 Score = 98.2 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +N ++ ++P + E QQ+ + A E +A G Sbjct: 237 RDEALHLTGTQHALNLLRSGQDDPEMAEIALECQQECHDLFVLAAQQEKDWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ FK NP PW++ ++ + E V+ Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDAPFKTRSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|269865122|ref|XP_002651812.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220063829|gb|EED42244.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] Length = 336 Score = 98.2 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 9/94 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + I + ++ EA +E + E++P +G+N Sbjct: 219 RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 269 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 95 QY++F+A+R +G ++ + + W Sbjct: 270 CKLMCQYIEFVADRLLFALGERKIYTFLTHSISW 303 >gi|332974578|gb|EGK11498.1| ribonucleotide-diphosphate reductase beta subunit [Kingella kingae ATCC 23330] Length = 384 Score = 98.2 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ L E Q + + +A E +A G Sbjct: 244 RDEALHLTSTQHMLNLMRSGVDDLDMAEIAAELQDECFELFKKAAEQEKEWAAYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID 101 +GLN QY+++I N R +GL+ F T+NP PW++ + Sbjct: 304 MIGLNKDILCQYVEYITNHRMLAVGLQAAFPQATQNPIPWINAWLS 349 >gi|315930891|gb|EFV09876.1| ribonucleotide reductase, small chain family protein [Campylobacter jejuni subsp. jejuni 305] Length = 305 Score = 98.2 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+ E K M +A LEI + +G Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENP 92 E+Y+ ++ ++R I L+ L+ ++P Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHP 305 >gi|193206379|ref|NP_500944.2| hypothetical protein F58F9.1 [Caenorhabditis elegans] Length = 581 Score = 98.2 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 46/82 (56%), Gaps = 2/82 (2%) Query: 28 KEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK 87 K + + +++E+ L+E + E++P +G+N +Y++F+A+ ++G + Sbjct: 502 KPAESRITEIINESVLVEQDFVRESLPTNLIGMNQHMMCKYVEFVADLLLEELGYSKRYN 561 Query: 88 YTENPFPWMSEVIDLKKEKNFF 109 T+N F +M E I ++ + NFF Sbjct: 562 -TKNLFDFM-ENISIEGKTNFF 581 >gi|172054963|ref|YP_001806290.1| ribonucleoside-diphosphate reductase subunit beta [Cyanothece sp. ATCC 51142] gi|171701244|gb|ACB54224.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp. ATCC 51142] Length = 347 Score = 97.8 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 9/127 (7%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DE H++ +I + K + + + + + EI + + +G++ Sbjct: 222 DELTHVSLYQKLITEAKTKFSY-----SEDEITELFVNTVEKEIEWTNHIFDGQILGVSE 276 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENP---FPWMSEVIDLKKEKNFFETRVTEYQQG 119 S E Y +++AN R IG+ ++ ENP W K + FFET VT Y Q Sbjct: 277 ASTEAYTKYLANLRLKAIGISAIYPEVENPYAHLDWADFKGIGKSKAAFFETEVTGYAQP 336 Query: 120 AELK-WD 125 +K W+ Sbjct: 337 TAVKGWE 343 >gi|216905873|ref|YP_002333501.1| ribonucleotide reductase subunit 2 [Equid herpesvirus 9] gi|216410027|dbj|BAH02445.1| small subunit of ribonucleotide reductase [Equid herpesvirus 9] Length = 321 Score = 97.8 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 4/116 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N + K ++ + EA +E + P+ L+ Sbjct: 203 RDEAIHTRASCCIYNNYLGG----FEKPEPKRIYELFSEAVNIECEFLLSHAPQNSHLLD 258 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 Y+++ A+R +IGL PLF + + + ++K NFFE R T Y Sbjct: 259 IGEIISYVRYSADRLLGEIGLSPLFNAPKPSTSFPLAFMTVEKHTNFFERRSTAYS 314 >gi|703073|gb|AAA80557.1| ribonucleotide reductase small subunit [Gallid herpesvirus 2] Length = 354 Score = 97.8 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 7/124 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+ + K + T+ EA +E + P+ +N Sbjct: 237 RDEAIHVEASCCIFKNYLAGP-----KPTTARIHTLFKEAVTVECEFLRTAAPRTSNIIN 291 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y+++ A+R + + P++ + P + ++ NFFE R T Y Sbjct: 292 IDAICSYVRYSADRLLRALDILPIYDEPKPPADFPLVLMSAASNTNFFERRNTAY--SGS 349 Query: 122 LKWD 125 + D Sbjct: 350 VSND 353 >gi|41387638|gb|AAS01682.1| ribonucleotide reductase small subunit [Gallid herpesvirus 2] Length = 343 Score = 97.8 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 49/124 (39%), Gaps = 7/124 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H+ + + K + + + EA +E A+ P L+ Sbjct: 226 RDEAIHVEASCCIFKNYL-----MGPKPSIGRVQELFKEAVQIECAFLRTAAPHNSQLLD 280 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y+++ A+R ++ + P++ + + ++ NFFE R T Y Sbjct: 281 VEAICSYVRYSADRLLKELDMPPIYNEPKPTADFPLALMTASNNTNFFERRNTAY--SGS 338 Query: 122 LKWD 125 + D Sbjct: 339 VSND 342 >gi|215275538|sp|P0C8I0|RIR2_ASFK5 RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit Length = 327 Score = 97.4 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 11/120 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG---FV 58 RDE +H +F +I+ P ++ +L EA L + K Sbjct: 196 RDEGMHCSFACFLISNYLNNIPE------EKIIHKILKEAVELVDEFISYAFDKARGSVP 249 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE-VIDLKKEKNFFETRVTEYQ 117 G + QY+++ + C + + ++K ENPFP M++ ++ ++ NFFE R T+YQ Sbjct: 250 GFSKEMLFQYIRYFTDNLCFMLQCKSIYK-VENPFPQMTKFFLNEVEKTNFFELRPTQYQ 308 >gi|322514736|ref|ZP_08067762.1| ribonucleotide-diphosphate reductase beta subunit [Actinobacillus ureae ATCC 25976] gi|322119331|gb|EFX91447.1| ribonucleotide-diphosphate reductase beta subunit [Actinobacillus ureae ATCC 25976] Length = 376 Score = 97.4 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE LHL +++N + ++P + +E +Q++ + A E +A G Sbjct: 237 RDEYLHLTGTQNMLNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN +Y+++I N R +GL F + NP PW++ ++ + E V+ Sbjct: 297 MIGLNEDILVKYVEYITNIRMQAVGLPRPFATSSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|312162814|ref|YP_003933799.1| ribonucleotide reductase subunit 2 [Saimiriine herpesvirus 1] gi|308096447|gb|ADO13787.1| ribonucleotide reductase subunit 2 [Saimiriine herpesvirus 1] Length = 338 Score = 97.4 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 7/119 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N P K + + EA +EI + H P+ L+ Sbjct: 217 RDEAIHTTASCYIYNNYLTGYP----KPSTDRIHYLFREAVEIEIRFIHSQAPRDSHILD 272 Query: 62 APSCEQ---YMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 A + Q Y+ F A+R I L PLF + ++ +K NFFE+R T Y Sbjct: 273 AAALRQIDNYVHFCADRLLKMIKLPPLFDAPAPDCSFPLALMFTEKHTNFFESRSTAYA 331 >gi|254672337|emb|CBA05511.1| ribonucleoside-diphosphate reductase beta chain [Neisseria meningitidis alpha275] Length = 345 Score = 97.4 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 6/102 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ +++ + E Q + + +A E +A G Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMS 97 +GLN QY+++I N R +GL F+ +NP PW++ Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 345 >gi|90409249|ref|ZP_01217354.1| ribonucleotide-diphosphate reductase beta subunit [Psychromonas sp. CNPT3] gi|90309647|gb|EAS37827.1| ribonucleotide-diphosphate reductase beta subunit [Psychromonas sp. CNPT3] Length = 381 Score = 97.4 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHLN ++N ++P + E K R + A E +A G Sbjct: 242 RDEALHLNSTQQILNIWADGKDDPEMAEIAIECHAKGRDIFLTAAAQEKEWAAYLFKDGS 301 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I+N R IG E F+ NP PW++ +I + E ++ Sbjct: 302 MIGLNEVILCQYVEYISNVRMQAIGYEAPFEIKNNPIPWINHWLISDNVQVAPQEAEISS 361 Query: 116 Y 116 Y Sbjct: 362 Y 362 >gi|238021387|ref|ZP_04601813.1| hypothetical protein GCWU000324_01286 [Kingella oralis ATCC 51147] gi|237868367|gb|EEP69373.1| hypothetical protein GCWU000324_01286 [Kingella oralis ATCC 51147] Length = 384 Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ E E Q + + +A E +A G Sbjct: 244 RDEALHLTSTQHMLNLMRGGAEGAEWAEIAAELQNECFELFKKAAEQEKEWAEYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID 101 +GLN QY+++I N R +GL+P F+ T+NP PW++ + Sbjct: 304 MIGLNKDILCQYVEYITNARMLAVGLQPAFEKATQNPIPWINTWLS 349 >gi|296316020|ref|YP_003662484.1| ribonucleotide reductase subunit 2 [Bovine herpesvirus 5] gi|40456143|gb|AAR86121.1| UL40 ribonucleotide reductase small subunit [Bovine herpesvirus 5] Length = 315 Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 6/123 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N + + R + EA +E + P+G L+ Sbjct: 198 RDEAVHTTASCCIFNNYLGGE-----RPPPDRVRKLFREAVEIEREFIWSRAPRGSHILD 252 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y+++ A+R I L PLF + ++ +K NFFE R T Y G Sbjct: 253 VEAISAYVEYSADRLLAAIHLPPLFGTPPPGTDFPLALMTAEKHTNFFERRSTTY-TGTV 311 Query: 122 LKW 124 + Sbjct: 312 IND 314 >gi|50313261|ref|YP_053065.1| ribonucleotide reductase subunit 2 [Equid herpesvirus 1] gi|132625|sp|P28847|RIR2_EHV1B RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|42795147|gb|AAS45904.1| small subunit of ribonucleotide reductase [Equid herpesvirus 1] gi|49617004|gb|AAT67277.1| ribonucleotide reductase RR2 [Equid herpesvirus 1] Length = 321 Score = 96.6 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 4/116 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N + K ++ + EA +E + P+ L+ Sbjct: 203 RDEAIHTRASCCIYNNYLGG----FEKPEPKRIYELFSEAVNIECEFLLSHAPQYSHLLD 258 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + Y+++ A+R +IGL PLF + + + ++K NFFE R T Y Sbjct: 259 IGAIISYVRYSADRLLGEIGLSPLFNAPKPSPSFPLAFMTVEKHTNFFERRSTAYS 314 >gi|294788520|ref|ZP_06753762.1| ribonucleoside-diphosphate reductase, beta subunit [Simonsiella muelleri ATCC 29453] gi|294483397|gb|EFG31082.1| ribonucleoside-diphosphate reductase, beta subunit [Simonsiella muelleri ATCC 29453] Length = 384 Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E + + +A E +A G Sbjct: 244 RDEALHLTSTQHMLNLMRNGTDDPEMAEIAAELHDECVALFKKAAAQEKEWAAYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101 +GLN QY+++I N R +GL F +NP PW++ + Sbjct: 304 MIGLNKDILGQYVEYITNLRMSAVGLPQAFPKALQNPIPWINAWLS 349 >gi|15616797|ref|NP_240009.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681552|ref|YP_002467937.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682108|ref|YP_002468492.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471235|ref|ZP_05635234.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11134533|sp|P57275|RIR2_BUCAI RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit gi|25285834|pir||G84950 ribonucleoside-diphosphate reductase (EC 1.17.4.1) nrdB [imported] - Buchnera sp. (strain APS) gi|10038860|dbj|BAB12895.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219621841|gb|ACL29997.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624395|gb|ACL30550.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311087074|gb|ADP67154.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 376 Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDVINQI----KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + EN E ++++ + A E +A G Sbjct: 237 RDEALHLTGTQHILNLLSNIKNNENMEDVVLECKEEAINIFISAAQQEKKWASYLFKSGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 +GLN QY+++I N R H IG + FK NP PW+++ + Sbjct: 297 MLGLNKDILCQYIEYITNIRMHAIGFKMPFKKQSNPIPWINDWL 340 >gi|311085920|gb|ADP66002.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086491|gb|ADP66572.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087626|gb|ADP67705.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 359 Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDVINQI----KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + EN E ++++ + A E +A G Sbjct: 220 RDEALHLTGTQHILNLLSNIKNNENMEDVVLECKEEAINIFISAAQQEKKWASYLFKSGS 279 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 +GLN QY+++I N R H IG + FK NP PW+++ + Sbjct: 280 MLGLNKDILCQYIEYITNIRMHAIGFKMPFKKQSNPIPWINDWL 323 >gi|15079087|ref|NP_149839.1| 376L [Invertebrate iridescent virus 6] gi|82012049|sp|Q91FE8|RIR2_IIV6 RecName: Full=Probable ribonucleoside-diphosphate reductase small subunit 376L; AltName: Full=Ribonucleotide reductase small subunit gi|15042456|gb|AAK82236.1|AF303741_377 376L [Invertebrate iridescent virus 6] Length = 360 Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 55/148 (37%), Gaps = 26/148 (17%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTK----EFQQKSRTMLHEATLLEIAYAHETMPK--- 55 DE+ H I++ EN Q+ + E LE A+ K Sbjct: 205 DETQHTEGMIELFKVFVEENKTGDQPIRPSVLQETVYKIAKEMVGLEEAFIDLVFKKYKD 264 Query: 56 ---------------GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMS 97 F GL + Y+++IA+RR + +G + +F Y NP P + Sbjct: 265 EPINDDNDLETKDNKDFFGLTPQRLKAYIKYIADRRLNLMGYKSIFNLEPYPTNPLPELE 324 Query: 98 EVIDLKKEKNFFETRVTEYQ-QGAELKW 124 +I+ NFFE R T+Y + W Sbjct: 325 IMINAPTHTNFFENRSTDYANVSTKGTW 352 >gi|132618|sp|P26713|RIR2_ASFM2 RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit Length = 327 Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 11/120 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG---FV 58 RDE +H +F +I+ P ++ +L EA L + + K Sbjct: 196 RDEGMHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFINYAFDKARGRVP 249 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE-VIDLKKEKNFFETRVTEYQ 117 G + QY+++ + C + + ++ NPFP M++ ++ ++ NFFE R T+YQ Sbjct: 250 GFSKEMLFQYIRYFTDNLCFMMQCKSIYN-VGNPFPQMTKFFLNEVEKTNFFELRPTQYQ 308 >gi|238897538|ref|YP_002923217.1| ribonucleoside-diphosphate reductase 1, beta subunit [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465295|gb|ACQ67069.1| ribonucleoside-diphosphate reductase 1, beta subunit [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 376 Score = 94.7 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL +++ ++ ++P + +E QQ+ + A E +A G Sbjct: 237 RDEALHLMGTQHMLDLMRSGKDDPEMADIAQECQQECSDLFLLAAQQEKEWAAYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY++++ N R + L+ F NP PW+ S ++ + E V+ Sbjct: 297 MIGLNQDILCQYIEYMTNIRMQAVKLDAPFSIRTNPIPWINSWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|27904669|ref|NP_777795.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|38605263|sp|Q89AS5|RIR2_BUCBP RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit gi|27904066|gb|AAO26900.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 376 Score = 94.7 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIKIENP----HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + + +KE ++ + + E +A G Sbjct: 237 RDEALHLTSTQHILNILHNDKNNEGMSDISKECYEECYHLFIRVSDQEKIWAKYLFQNGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R IGL FK NP PW+ S +I + E V+ Sbjct: 297 MLGLNQEILSQYIEYITNIRMKAIGLPSPFKILSNPIPWINSWLISDNVQVAPQEISVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|319779630|ref|YP_004130543.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Taylorella equigenitalis MCE9] gi|317109654|gb|ADU92400.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Taylorella equigenitalis MCE9] Length = 377 Score = 94.7 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 6/105 (5%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + E + + + A E A+A G Sbjct: 237 RDEALHLTSTQHMLNIMSSGADDPEMAHIASELKNQCFELFKSAAEQEKAWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVI 100 +GLN QY+++I N R +GLE F ++ NP PW++ + Sbjct: 297 MIGLNKEILIQYVEYITNIRMSAVGLEEAFPQSKQNPIPWINTWL 341 >gi|325268103|ref|ZP_08134749.1| ribonucleotide-diphosphate reductase beta subunit [Kingella denitrificans ATCC 33394] gi|324980488|gb|EGC16154.1| ribonucleotide-diphosphate reductase beta subunit [Kingella denitrificans ATCC 33394] Length = 384 Score = 94.7 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ E ++ QQ+ + +A E +A G Sbjct: 244 RDEALHLTSTQHMLNLMRGGSEGTEWAQIAQDLQQECFDLFVKAAEQEKEWASYLFKDGS 303 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID 101 +GLN QY+++I N R +GL F T+NP PW++ + Sbjct: 304 MIGLNKDILCQYVEYITNHRMLAVGLPVAFPKSTQNPIPWINAWLS 349 >gi|325103985|ref|YP_004273639.1| ribonucleotide reductase [Pedobacter saltans DSM 12145] gi|324972833|gb|ADY51817.1| ribonucleotide reductase [Pedobacter saltans DSM 12145] Length = 324 Score = 94.7 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LN 61 DE LH N GI +IN+IK E P + +Q+ ++ E+ +E G + +N Sbjct: 194 DEQLHANAGIYIINKIKEEFPEYIDEAVEQEIYDIVTESINIEDEILGWIFENGDLEHIN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +M++ + QIG + L+ +E +P W E I +FF R EY + Sbjct: 254 RRDLLNFMKYRIDVSLQQIGFKKLYNVSETEYSPMVWFEEEIFANSLDDFFAKRPVEYTK 313 >gi|311977695|ref|YP_003986815.1| ribonucleoside-diphosphate reductase small chain [Acanthamoeba polyphaga mimivirus] gi|77416594|sp|Q7T6Y9|RIR2_MIMIV RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|55664859|gb|AAQ09571.2| ribonucleotide reductase small subunit [Acanthamoeba polyphaga mimivirus] gi|308204332|gb|ADO18133.1| ribonucleoside-diphosphate reductase small chain [Acanthamoeba polyphaga mimivirus] Length = 417 Score = 94.3 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 57/118 (48%), Gaps = 9/118 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+ H+ + + L + + ++ EA +E + ++++P +G+N Sbjct: 295 RDENKHVELACIMYSL-------LNNRLKESVVYQIIDEAIEIEEEFINDSLPCKLLGMN 347 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + QY++++A+R +G F +NPF +M + ID+ + NFFE R Y Sbjct: 348 SELMSQYIKYVADRLLVDLGYRKKFN-VDNPFEYMKK-IDVFVKANFFEKRNDAYSNA 403 >gi|33152746|ref|NP_874099.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus ducreyi 35000HP] gi|33148970|gb|AAP96488.1| ribonucleoside-diphosphate reductase, beta chain [Haemophilus ducreyi 35000HP] Length = 376 Score = 94.3 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE LHL ++N I ++P + E QQ++ + A E +A G Sbjct: 237 RDEYLHLAGTQQMLNIIASGQDDPEMAEIAIECQQEAYDLFVAAAEQEKEWAEYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN +Y+++I N R +GL F NP PW++ ++ + E V+ Sbjct: 297 MIGLNKEILVKYVEYITNIRMQSVGLPLPFATQSNPIPWINAWLVSDNVQVAPQEVEVSS 356 Query: 116 Y 116 Y Sbjct: 357 Y 357 >gi|162849254|emb|CAN10143.1| Ribonucleotide reductase small subunit [African swine fever virus Benin 97/1] Length = 327 Score = 94.3 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 11/120 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG---FV 58 RDE +H +F +I+ P ++ +L EA L + + K Sbjct: 196 RDEGMHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFINYAFDKARGRVP 249 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE-VIDLKKEKNFFETRVTEYQ 117 G + QY+++ + C + + ++K NPFP M++ ++ ++ NFFE R T+YQ Sbjct: 250 GFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEKTNFFELRPTQYQ 308 >gi|162849427|emb|CAN10392.1| Ribonucleotide reductase small subunit [African swine fever virus OURT 88/3] gi|291289488|emb|CBH29145.1| BA71V-F334L [African swine fever virus E75] gi|303398729|emb|CBW46710.1| F334L [African swine fever virus Georgia 2007/1] Length = 334 Score = 93.9 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 11/120 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG---FV 58 RDE +H +F +I+ P ++ +L EA L + + K Sbjct: 203 RDEGMHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFINYAFDKARGRVP 256 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE-VIDLKKEKNFFETRVTEYQ 117 G + QY+++ + C + + ++K NPFP M++ ++ ++ NFFE R T+YQ Sbjct: 257 GFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEKTNFFELRPTQYQ 315 >gi|332292139|ref|YP_004430748.1| ATP-cone domain protein [Krokinobacter diaphorus 4H-3-7-5] gi|332170225|gb|AEE19480.1| ATP-cone domain protein [Krokinobacter diaphorus 4H-3-7-5] Length = 425 Score = 93.9 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 4/122 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62 E +H +FGID+I IK ENP + E + M EA E G + L Sbjct: 296 EQIHGDFGIDIIKIIKAENPEWFDAEHSATVQEMCKEAFKAESNIVDWIFEAGELDFLPK 355 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQG 119 ++++ N+ IG+EP+F+ E W + I K +FF R Y + Sbjct: 356 ALVNEFIKDRFNKSLTSIGIEPVFEVDETLLKDAEWFDDEIIGTKHGDFFVKRSVNYTKR 415 Query: 120 AE 121 A+ Sbjct: 416 AQ 417 >gi|30984468|ref|NP_851900.1| ribonucleotide reductase subunit 2 [Macacine herpesvirus 1] gi|28804676|dbj|BAC58080.1| ribonucleotide reductase small subunit [Cercopithecine herpesvirus 1] gi|30844282|gb|AAP41458.1| small subunit of ribonucleotide reductase [Macacine herpesvirus 1] Length = 338 Score = 93.6 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 7/119 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N + K ++ + EA +EI + P L+ Sbjct: 217 RDEAVHTTASCYIYNNYLGGHR----KPTAERVYRLFREAVDIEIGFIRSQAPANSRVLD 272 Query: 62 A---PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 A + E Y++F A+R I ++PLF + ++ +K NFFE R T Y Sbjct: 273 AAALDAIENYVRFSADRLLVLIKMKPLFGAPAPAPSFPLSLMSTEKHTNFFECRSTAYA 331 >gi|270339459|ref|YP_003331539.1| ribonucleotide reductase subunit 2 [Felid herpesvirus 1] gi|254940175|gb|ACT88318.1| ribonucleotide reductase subunit 2 [Felid herpesvirus 1] Length = 331 Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 6/117 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N K ++ ++ EA LE + P+ LN Sbjct: 213 RDEAIHTTASCCIYNNYLPAQI----KPSTERIHSLFREAVELECEFISTCAPRCSNLLN 268 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQ 117 Y+++ A+R I + P+F +P + + ++K NFFE T Y Sbjct: 269 VADICNYVRYSADRLLGIIKVAPIFNVPPPHP-DFPLAFMVIEKHTNFFERHSTTYS 324 >gi|212712302|ref|ZP_03320430.1| hypothetical protein PROVALCAL_03388 [Providencia alcalifaciens DSM 30120] gi|212685048|gb|EEB44576.1| hypothetical protein PROVALCAL_03388 [Providencia alcalifaciens DSM 30120] Length = 380 Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPH----LWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ E +++ + +A E +A +G Sbjct: 241 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEEECYRLFVDAAEQEKEWAEYLFSEGS 300 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 301 MIGLNKDILCQYVEYITNIRMQAVGLKLPFEARSNPIPWINAWLVSDNVQVAPQEVEVSS 360 Query: 116 Y 116 Y Sbjct: 361 Y 361 >gi|3183695|emb|CAA07027.1| ribonucleotide reductase small subunit [Felid herpesvirus 1] Length = 331 Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 12/120 (10%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N K ++ ++ EA LE + P+ LN Sbjct: 213 RDEAIHTTASCCIYNNYLPAQI----KPSTERIHSLFREAVELECEFISTCAPRCSNLLN 268 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---N-PFPWMSEVIDLKKEKNFFETRVTEYQ 117 Y+++ A+R I + P+F N P +M ++K NFFE T Y Sbjct: 269 VADICNYVRYSADRLLGIIKVAPIFNVPPPHPNFPLAFMV----IEKHTNFFEKHSTTYS 324 >gi|326536452|ref|YP_004300883.1| NrdB aerobic ribonucleoside diphosphate reductase small subunit [Aeromonas phage 65] gi|312262798|gb|ADQ53054.1| NrdB aerobic ribonucleoside diphosphate reductase small subunit [Aeromonas phage 65] Length = 376 Score = 92.8 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 5/105 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKGF 57 RDE+LHL +I++ + ++P + K + K+ ++ E E +A M Sbjct: 237 RDENLHLKATQTIISRWQTGKDDPEMVEIAKRLEGKAVSIFEEVVAQEKEWAEYLMGDKS 296 Query: 58 V-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101 + GLN Y++++A+ R GL + +NP PW+++ ++ Sbjct: 297 LNGLNRDVLCNYIEYLADNRMRSAGLPSSYAKRKNPLPWVTKWLN 341 >gi|9628152|ref|NP_042738.1| ribonucleotide reductase small subunit [African swine fever virus] gi|1172939|sp|P42492|RIR2_ASFB7 RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|780414|gb|AAA65274.1| ribonucleotide reductase small subunit [African swine fever virus] gi|1097433|prf||2113434AT ribonucleotide reductase:SUBUNIT=small Length = 334 Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 11/120 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG---FV 58 RDE +H +F +I+ P ++ +L EA L + + K Sbjct: 203 RDEGVHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFINYAFDKARGRVP 256 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE-VIDLKKEKNFFETRVTEYQ 117 G + QY+++ + C + + ++K NPFP M++ ++ ++ NFFE R T+YQ Sbjct: 257 GFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEKTNFFELRPTQYQ 315 >gi|59912|emb|CAA24930.1| unnamed protein product [Human herpesvirus 2] Length = 337 Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 8/126 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N + K + + EA +EI + P L+ Sbjct: 216 RDEAVHTTASCYIYNNYLGD----HAKPEAARVYRLFREAVDIEIGFIRSQAPTDSSILS 271 Query: 62 A---PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + E Y++F A+R I ++PL+ + ++ K NFFE R T Y Sbjct: 272 PGALAAIENYVRFSADRLLGLIHMQPLYSAPAPDASFPLSLMSTDKHTNFFECRSTSYA- 330 Query: 119 GAELKW 124 GA + Sbjct: 331 GAVVND 336 >gi|215275539|sp|P0C8I1|RIR2_ASFP4 RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit Length = 327 Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 11/120 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG---FV 58 RDE +H +F +I+ P ++ +L EA L + + K Sbjct: 196 RDEGVHCSFACFLISNYVYNIPE------ERIIHKILKEAVELVDEFINYAFDKARGRVP 249 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE-VIDLKKEKNFFETRVTEYQ 117 G + QY+++ + C + + ++K NPFP M++ ++ ++ NFFE R T+YQ Sbjct: 250 GFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEKTNFFELRPTQYQ 308 >gi|83722609|ref|YP_443887.1| ribonucleotide reductase subunit 2 [Papiine herpesvirus 2] gi|75905762|gb|ABA29294.1| UL40 [Papiine herpesvirus 2] Length = 339 Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 7/119 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N + K ++ + EA +EI + P L+ Sbjct: 218 RDEAVHTTASCYIYNNYLAGHR----KPEPERVYRLFREAVEIEIGFIRSQAPADSRILD 273 Query: 62 APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 A + E Y++F A+R I ++PLF + ++ +K NFFE R T Y Sbjct: 274 AAALAAIENYVRFSADRLLALIEMKPLFGAPAPAPSFPLNLMSTEKHTNFFERRSTAYA 332 >gi|70937204|ref|XP_739440.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56516443|emb|CAH87750.1| hypothetical protein PC302623.00.0 [Plasmodium chabaudi chabaudi] Length = 72 Score = 92.0 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 2/60 (3%) Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122 QY++F+A+R +G +F +++NPF WM +I L+ + NFFE RV +YQ+ + Sbjct: 1 RLMSQYIEFVADRLLECLGCSKVF-HSKNPFSWMD-LISLQGKTNFFEKRVADYQKSGVM 58 >gi|215275540|sp|P0C8I2|RIR2_ASFWA RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit Length = 327 Score = 92.0 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 11/120 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG---FV 58 RDE +H +F +I+ P ++ +L EA L + K Sbjct: 196 RDEGVHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFISYAFDKARGRVP 249 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE-VIDLKKEKNFFETRVTEYQ 117 G + QY+++ + C + + ++K NPFP M++ ++ ++ NFFE R T+YQ Sbjct: 250 GFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEKTNFFELRPTQYQ 308 >gi|56694763|ref|YP_164483.1| ribonucleotide reductase subunit 2 [Cercopithecine herpesvirus 2] gi|52843315|gb|AAU88106.1| small subunit of ribonucleotide reductase [Cercopithecine herpesvirus 2] Length = 325 Score = 92.0 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 7/119 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N K ++ + EA +EI + P L+ Sbjct: 204 RDEAVHTTASCYIYNNYLAG----HHKPEPERVYRLFREAVEIEIGFIRSQAPADSRILD 259 Query: 62 APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 A + E Y++F A+R I ++PLF + ++ +K NFFE R T Y Sbjct: 260 AAALAAIENYVRFSADRLLALIRMKPLFGAPAPAPSFPLSLMSTEKHTNFFECRSTAYA 318 >gi|21672460|ref|NP_660527.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25091143|sp|Q8K9W4|RIR2_BUCAP RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit gi|21623075|gb|AAM67738.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 376 Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 5/105 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTK----EFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + E + K E ++++ + A+ E +A G Sbjct: 237 RDEALHLTGTQHILNILNNEKNNENMKNTVLECREEAIKIFISASEQEKKWAKYLFQDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101 +GLN QY+++I N R H IG + F+ T NP PW++ ++ Sbjct: 297 MLGLNKDILCQYIEYITNIRMHAIGFKMPFEKTSNPIPWINSWLN 341 >gi|38638230|ref|NP_944413.1| ribonucleotide reductase subunit 2 [Psittacid herpesvirus 1] gi|81987371|sp|Q6UDJ1|RIR2_PSHV1 RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|34500236|gb|AAQ73719.1| unknown [Psittacid herpesvirus 1] Length = 313 Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 4/116 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N +P K ++ + EA +E + PK ++ Sbjct: 195 RDETIHTTASCCIYNNWLKGHP----KPSVKRIHQLFKEAVEIECDFLVARAPKAARLID 250 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + + +++F ANR IG+ ++ + ++ L+K NFFE R T Y Sbjct: 251 IDAIQSFVRFTANRWLSMIGVPTIYDDPAPDPTFPLALMSLEKNVNFFEHRSTAYS 306 >gi|319760602|ref|YP_004124540.1| ribonucleoside-diphosphate reductase 1 subunit beta [Candidatus Blochmannia vafer str. BVAF] gi|318039316|gb|ADV33866.1| ribonucleoside-diphosphate reductase 1 subunit beta [Candidatus Blochmannia vafer str. BVAF] Length = 376 Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLWTKEF--QQKSRTMLHEATLLEIAYAHETMPKG- 56 RDESLHL+ ++N ++ ++P + Q +S + A E +AH G Sbjct: 237 RDESLHLSATQHILNLMQSGADDPEMAEISLMYQSESYNLFLMAAEQEKMWAHYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R IGL+ F N PW+ S ++ + E + Sbjct: 297 MIGLNKEILCQYIEYITNIRMQAIGLKAPFHIKANVIPWINSWLVSDNVQVAPQEVESSS 356 Query: 116 Y---QQGAELKWD 125 Y Q ++ D Sbjct: 357 YLVGQINTQINDD 369 >gi|94676795|ref|YP_588829.1| ribonucleotide-diphosphate reductase subunit beta [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219945|gb|ABF14104.1| ribonucleoside-diphosphate reductase, beta subunit [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 376 Score = 91.2 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 9/133 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLWTK--EFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N ++ ++P + E Q S + A E +A G Sbjct: 237 RDEALHLAGTQHMLNLMRLGKDDPEMADIALECQHDSYHLFLXAANQEKDWASYLFRDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R + L+ F NP PW+ S ++ + E V+ Sbjct: 297 MIGLNEEILCQYIEYITNIRMQAVLLDLPFATRSNPIPWINSWLVSDNVQVAPQEVEVSS 356 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 357 YLVGQINSEVNSD 369 >gi|307107666|gb|EFN55908.1| hypothetical protein CHLNCDRAFT_57791 [Chlorella variabilis] Length = 849 Score = 90.9 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 7/96 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H+ + + ++ +K +++ ++ EA E A+ +P GL Sbjct: 756 RDEGVHVESAGVMYSLLR-------SKLTDSQAQGIVGEAVEAERAFVCGQLPLEATGLE 808 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97 A + E+Y+Q++ +R +G PL++ NP PW+ Sbjct: 809 AGAMEEYLQYVGDRLLGALGHAPLYRVAANPLPWLE 844 >gi|9629310|ref|NP_044510.1| ribonucleotide reductase subunit 2 [Human herpesvirus 2] gi|61231410|sp|P69520|RIR2_HHV23 RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase 38 kDa subunit; AltName: Full=Ribonucleotide reductase small subunit gi|61231418|sp|P69521|RIR2_HHV2H RecName: Full=Ribonucleoside-diphosphate reductase small chain; Short=R2; AltName: Full=Ribonucleotide reductase 38 kDa subunit; AltName: Full=Ribonucleotide reductase small subunit gi|330200|gb|AAA45807.1| 38K protein [Human herpesvirus 2] gi|1869863|emb|CAB06726.1| ribonucleotide reductase small subunit [Human herpesvirus 2] gi|224613173|dbj|BAH24264.1| ribonucleotide reductase small subunit [Human herpesvirus 2] gi|224613175|dbj|BAH24265.1| ribonucleotide reductase small subunit [Human herpesvirus 2] Length = 337 Score = 90.9 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 8/126 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N K + + EA +EI + P L+ Sbjct: 216 RDEAVHTTASCYIYNNYLGG----HAKPEAARVYRLFREAVDIEIGFIRSQAPTDSSILS 271 Query: 62 A---PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + E Y++F A+R I ++PL+ + ++ K NFFE R T Y Sbjct: 272 PGALAAIENYVRFSADRLLGLIHMQPLYSAPAPDASFPLSLMSTDKHTNFFECRSTSYA- 330 Query: 119 GAELKW 124 GA + Sbjct: 331 GAVVND 336 >gi|290766061|gb|ADD60039.1| ribonucleotide reductase subunit 2 [Human herpesvirus 1] Length = 340 Score = 90.9 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 8/126 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N K + + +A +EI + P L+ Sbjct: 219 RDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 274 Query: 62 APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + E Y++F A+R I ++PLF + ++ K NFFE R T Y Sbjct: 275 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA- 333 Query: 119 GAELKW 124 GA + Sbjct: 334 GAVVND 339 >gi|222478371|gb|ACM62263.1| ribonucleotide reductase subunit 2 [Human herpesvirus 1] Length = 340 Score = 90.9 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 8/126 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N K + + +A +EI + P L+ Sbjct: 219 RDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 274 Query: 62 APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + E Y++F A+R I ++PLF + ++ K NFFE R T Y Sbjct: 275 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA- 333 Query: 119 GAELKW 124 GA + Sbjct: 334 GAVVND 339 >gi|222475861|ref|YP_002564382.1| ribonucleotide reductase [Halorubrum lacusprofundi ATCC 49239] gi|222454232|gb|ACM58496.1| ribonucleotide reductase [Halorubrum lacusprofundi ATCC 49239] Length = 336 Score = 90.9 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 58/122 (47%), Gaps = 4/122 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62 E +H FG+++++ I+ ENP L+ EF+ + R A E+ +G + L Sbjct: 207 EQIHGLFGVELVDTIREENPGLFDDEFEAEIREACRRAYEAEMGMLDWIFGEGELQFLPR 266 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQG 119 ++++ N+ +G+ P+F+ ++ W E I + K+ +FF R T Y + Sbjct: 267 EYVNEFLKDRFNQSLENVGVYPMFETDDDLLDETRWFDEDIMMTKDNDFFSKRSTTYNKH 326 Query: 120 AE 121 + Sbjct: 327 TQ 328 >gi|9625893|ref|NP_040141.1| ribonucleotide reductase subunit 2 [Human herpesvirus 3] gi|132630|sp|P09247|RIR2_VZVD RecName: Full=Ribonucleoside-diphosphate reductase small chain; Short=R2; AltName: Full=Ribonucleotide reductase small subunit gi|259645448|sp|Q4JQV7|RIR2_VZVO RecName: Full=Ribonucleoside-diphosphate reductase small chain; Short=R2; AltName: Full=Ribonucleotide reductase small subunit gi|60007|emb|CAA27901.1| ribonucleotide reductase (small subunit) [Human herpesvirus 3 strain Dumas] gi|46981429|gb|AAT07700.1| ribonucleotide reductase small subunit [Human herpesvirus 3] gi|46981500|gb|AAT07776.1| ribonucleotide reductase small subunit [Human herpesvirus 3] gi|66865986|gb|AAY57634.1| ORF18 [Human herpesvirus 3] gi|66866058|gb|AAY57705.1| ORF18 [Human herpesvirus 3] gi|83721826|emb|CAI44861.1| ribonucleotide reductase small subunit [Human herpesvirus 3] gi|90992817|gb|ABE03036.1| ribonucleotide reductase small subunit [Human herpesvirus 3] gi|91980319|gb|ABE67126.1| small subunit ribonucleotide reductase [Human herpesvirus 3] gi|94481816|gb|ABF21518.1| small subunit ribonucleotide reductase [Human herpesvirus 3] gi|94481890|gb|ABF21591.1| small subunit ribonucleotide reductase [Human herpesvirus 3] gi|94481964|gb|ABF21664.1| small subunit ribonucleotide reductase [Human herpesvirus 3] gi|94482038|gb|ABF21737.1| small subunit ribonucleotide reductase [Human herpesvirus 3] gi|94482112|gb|ABF21810.1| small subunit ribonucleotide reductase [Human herpesvirus 3] gi|94482186|gb|ABF21883.1| small subunit ribonucleotide reductase [Human herpesvirus 3] gi|94482260|gb|ABF21956.1| small subunit ribonucleotide reductase [Human herpesvirus 3] gi|94482334|gb|ABF22029.1| small subunit ribonucleotide reductase [Human herpesvirus 3] gi|94482408|gb|ABF22102.1| small subunit ribonucleotide reductase [Human herpesvirus 3] gi|94482482|gb|ABF22175.1| small subunit ribonucleotide reductase [Human herpesvirus 3] gi|94482556|gb|ABF22248.1| small subunit ribonucleotide reductase [Human herpesvirus 3] gi|111184743|gb|ABH08451.1| ribonucleotide reductase small subunit [Human herpesvirus 3] gi|157965778|gb|ABW06924.1| ribonucleotide reductase small subunit [Human herpesvirus 3] Length = 306 Score = 90.5 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 7/116 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + + N E P + + + EA +E A+ PK + +N Sbjct: 191 RDEAIHTSASCCIYNNYVPEKPAI------TRIHQLFSEAVEIECAFLKSHAPKTRL-VN 243 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + QY++F A+R I + LF + + K NFFE T Y Sbjct: 244 VDAITQYVKFSADRLLSAINVPKLFNTPPPDSDFPLAFMIADKNTNFFERHSTSYA 299 >gi|1172944|sp|P06474|RIR2_HHV1K RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase 38 kDa subunit; AltName: Full=Ribonucleotide reductase small subunit gi|807641|gb|AAA66436.1| unknown protein [Human herpesvirus 1] Length = 340 Score = 90.5 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 8/126 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N K + + +A +EI + P L+ Sbjct: 219 RDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 274 Query: 62 APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + E Y++F A+R I ++PLF + ++ K NFFE R T Y Sbjct: 275 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA- 333 Query: 119 GAELKW 124 GA + Sbjct: 334 GAVVND 339 >gi|114318828|gb|ABI63502.1| UL40 [Human herpesvirus 1] gi|290766139|gb|ADD60116.1| ribonucleotide reductase subunit 2 [Human herpesvirus 1] Length = 340 Score = 90.5 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 8/126 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N K + + +A +EI + P L+ Sbjct: 219 RDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 274 Query: 62 APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + E Y++F A+R I ++PLF + ++ K NFFE R T Y Sbjct: 275 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA- 333 Query: 119 GAELKW 124 GA + Sbjct: 334 GAVVND 339 >gi|9629421|ref|NP_044642.1| ribonucleotide reductase subunit 2 [Human herpesvirus 1] gi|132622|sp|P10224|RIR2_HHV11 RecName: Full=Ribonucleoside-diphosphate reductase small chain; Short=R2; AltName: Full=Ribonucleotide reductase 38 kDa subunit; AltName: Full=Ribonucleotide reductase small subunit; Flags: Precursor gi|59540|emb|CAA32303.1| ribonucleotide reductase small subunit [Human herpesvirus 1] Length = 340 Score = 90.5 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 8/126 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N K + + +A +EI + P L+ Sbjct: 219 RDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 274 Query: 62 APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + E Y++F A+R I ++PLF + ++ K NFFE R T Y Sbjct: 275 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA- 333 Query: 119 GAELKW 124 GA + Sbjct: 334 GAVVND 339 >gi|207108882|ref|ZP_03243044.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter pylori HPKX_438_CA4C1] Length = 79 Score = 90.1 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 2/78 (2%) Query: 49 AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KN 107 +GL + EQY+QF+A+ R ++G+ ++ ++P W+ ++ N Sbjct: 2 GDYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSN 60 Query: 108 FFETRVTEYQQGAELKWD 125 FFE RV+ Y +G+ D Sbjct: 61 FFEARVSNYAKGSVSFDD 78 >gi|163786628|ref|ZP_02181076.1| ribonucleoside-diphosphate reductase , beta subunit 1 [Flavobacteriales bacterium ALC-1] gi|159878488|gb|EDP72544.1| ribonucleoside-diphosphate reductase , beta subunit 1 [Flavobacteriales bacterium ALC-1] Length = 429 Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 4/119 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62 E++H +FGID+I IK ENP + E + R + EA E G + L Sbjct: 300 ENIHGDFGIDIIKIIKAENPTWFDAEHNEIVRELCREAFASESELVDWIFEAGELEFLPK 359 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQQ 118 ++++ N IG+E +F E W + I K +FF R Y + Sbjct: 360 DVINEFLKNRFNNSLESIGIEKVFDVDETLLTQTEWFDDEIIGTKHGDFFVKRSINYSK 418 >gi|30960813|gb|AAP39214.1| UL40 [Human herpesvirus 1] gi|30960819|gb|AAP39218.1| UL40 [Human herpesvirus 1] Length = 307 Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 7/119 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N K ++ + +A +EI + P L+ Sbjct: 186 RDEAVHTTASCYIYNNYLGG----HAKPPPERVYGLFRQAVEIEIGFIRSQAPTDSHILS 241 Query: 62 APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + E Y++F A+R I ++PLF + ++ K NFFE R T Y Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA 300 >gi|30960831|gb|AAP39226.1| UL40 [Human herpesvirus 1] Length = 307 Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 7/119 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N K ++ + +A +EI + P L+ Sbjct: 186 RDEAVHTTASCYIYNNYLGG----HAKPPPERVYGLFRQAVEIEIGFIRSQAPTDSHILS 241 Query: 62 APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + E Y++F A+R I ++PLF + ++ K NFFE R T Y Sbjct: 242 PAALVAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA 300 >gi|159146681|gb|ABW90785.1| ribonucleotide reductase subunit 2 [Leporid herpesvirus 4] Length = 316 Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 7/119 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG---FV 58 RDE++H + N + K ++ + + A +EIA+ P Sbjct: 195 RDEAVHTTASCCLYNNYLGQY----AKPPSERIKQLFSNAVEIEIAFIKAKAPANSRILD 250 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 G + E Y++F A+R IG LF + ++ +K NFFE R T Y Sbjct: 251 GAAIAAIESYVRFSADRLLKLIGEPALFDEPPPNDGFPLRLMSTEKHTNFFECRSTAYA 309 >gi|221783|dbj|BAA00748.1| UL40 [Human herpesvirus 2] Length = 262 Score = 89.3 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 7/119 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N K + + EA +EI + P L+ Sbjct: 141 RDEAVHTTASCYIYNNYLGG----HAKPEAARVYRLFREAVDIEIGFIRSQAPTDSSILS 196 Query: 62 A---PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + E Y++F A+R I ++PL+ + ++ K NFFE R T Y Sbjct: 197 PGALAAIENYVRFSADRLLGLIHMQPLYSAPAPDASFPLSLMSTDKHTNFFECRSTSYA 255 >gi|301750612|gb|ADK88940.1| ribonucleotide reductase subunit 2 [Leporid herpesvirus 4] Length = 316 Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 7/119 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG---FV 58 RDE++H + N + K ++ + + A +EIA+ P Sbjct: 195 RDEAVHTTASCCLYNNYLGQY----AKPPSERIKQLFSNAVEIEIAFIKAKAPANSRILD 250 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 G + E Y++F A+R IG LF + ++ +K NFFE R T Y Sbjct: 251 GAAIAAIESYVRFSADRLLKLIGEPALFDEPPPNDGFPLRLMSTEKHTNFFECRSTAYA 309 >gi|22550280|gb|AAN01603.1| ribonucleotide reductase small subunit [Human herpesvirus 2 strain G] Length = 342 Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 12/129 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N K + + EA +EI + P L+ Sbjct: 219 RDEAVHTTASCYIYNNYLGG----HAKPEAARVYRLFREAVDIEIGFIRSQAPTDSSILS 274 Query: 62 A---PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTE 115 + E Y++F A+R I ++PL+ + P P + ++ K NFFE R T Sbjct: 275 PGALAAIENYVRFSADRLLGLIHMQPLYSASA-PAPDASFPLSLMSTDKHTNFFECRSTS 333 Query: 116 YQQGAELKW 124 Y GA + Sbjct: 334 YA-GAVVND 341 >gi|30960231|gb|AAP38826.1| UL40 [Human herpesvirus 1] gi|30960234|gb|AAP38828.1| UL40 [Human herpesvirus 1] gi|30960237|gb|AAP38830.1| UL40 [Human herpesvirus 1] gi|30960240|gb|AAP38832.1| UL40 [Human herpesvirus 1] gi|30960243|gb|AAP38834.1| UL40 [Human herpesvirus 1] gi|30960246|gb|AAP38836.1| UL40 [Human herpesvirus 1] gi|30960249|gb|AAP38838.1| UL40 [Human herpesvirus 1] gi|30960252|gb|AAP38840.1| UL40 [Human herpesvirus 1] gi|30960255|gb|AAP38842.1| UL40 [Human herpesvirus 1] gi|30960258|gb|AAP38844.1| UL40 [Human herpesvirus 1] gi|30960261|gb|AAP38846.1| UL40 [Human herpesvirus 1] gi|30960264|gb|AAP38848.1| UL40 [Human herpesvirus 1] gi|30960267|gb|AAP38850.1| UL40 [Human herpesvirus 1] gi|30960270|gb|AAP38852.1| UL40 [Human herpesvirus 1] gi|30960273|gb|AAP38854.1| UL40 [Human herpesvirus 1] gi|30960276|gb|AAP38856.1| UL40 [Human herpesvirus 1] gi|30960279|gb|AAP38858.1| UL40 [Human herpesvirus 1] gi|30960282|gb|AAP38860.1| UL40 [Human herpesvirus 1] gi|30960285|gb|AAP38862.1| UL40 [Human herpesvirus 1] gi|30960288|gb|AAP38864.1| UL40 [Human herpesvirus 1] gi|30960291|gb|AAP38866.1| UL40 [Human herpesvirus 1] gi|30960294|gb|AAP38868.1| UL40 [Human herpesvirus 1] gi|30960297|gb|AAP38870.1| UL40 [Human herpesvirus 1] gi|30960300|gb|AAP38872.1| UL40 [Human herpesvirus 1] gi|30960303|gb|AAP38874.1| UL40 [Human herpesvirus 1] gi|30960306|gb|AAP38876.1| UL40 [Human herpesvirus 1] gi|30960309|gb|AAP38878.1| UL40 [Human herpesvirus 1] gi|30960312|gb|AAP38880.1| UL40 [Human herpesvirus 1] gi|30960315|gb|AAP38882.1| UL40 [Human herpesvirus 1] gi|30960318|gb|AAP38884.1| UL40 [Human herpesvirus 1] gi|30960321|gb|AAP38886.1| UL40 [Human herpesvirus 1] gi|30960324|gb|AAP38888.1| UL40 [Human herpesvirus 1] gi|30960327|gb|AAP38890.1| UL40 [Human herpesvirus 1] gi|30960330|gb|AAP38892.1| UL40 [Human herpesvirus 1] gi|30960333|gb|AAP38894.1| UL40 [Human herpesvirus 1] gi|30960336|gb|AAP38896.1| UL40 [Human herpesvirus 1] gi|30960339|gb|AAP38898.1| UL40 [Human herpesvirus 1] gi|30960342|gb|AAP38900.1| UL40 [Human herpesvirus 1] gi|30960345|gb|AAP38902.1| UL40 [Human herpesvirus 1] gi|30960348|gb|AAP38904.1| UL40 [Human herpesvirus 1] gi|30960351|gb|AAP38906.1| UL40 [Human herpesvirus 1] gi|30960354|gb|AAP38908.1| UL40 [Human herpesvirus 1] gi|30960357|gb|AAP38910.1| UL40 [Human herpesvirus 1] gi|30960360|gb|AAP38912.1| UL40 [Human herpesvirus 1] gi|30960363|gb|AAP38914.1| UL40 [Human herpesvirus 1] gi|30960366|gb|AAP38916.1| UL40 [Human herpesvirus 1] gi|30960369|gb|AAP38918.1| UL40 [Human herpesvirus 1] gi|30960372|gb|AAP38920.1| UL40 [Human herpesvirus 1] gi|30960375|gb|AAP38922.1| UL40 [Human herpesvirus 1] gi|30960378|gb|AAP38924.1| UL40 [Human herpesvirus 1] gi|30960381|gb|AAP38926.1| UL40 [Human herpesvirus 1] gi|30960384|gb|AAP38928.1| UL40 [Human herpesvirus 1] gi|30960387|gb|AAP38930.1| UL40 [Human herpesvirus 1] gi|30960390|gb|AAP38932.1| UL40 [Human herpesvirus 1] gi|30960393|gb|AAP38934.1| UL40 [Human herpesvirus 1] gi|30960396|gb|AAP38936.1| UL40 [Human herpesvirus 1] gi|30960399|gb|AAP38938.1| UL40 [Human herpesvirus 1] gi|30960402|gb|AAP38940.1| UL40 [Human herpesvirus 1] gi|30960405|gb|AAP38942.1| UL40 [Human herpesvirus 1] gi|30960408|gb|AAP38944.1| UL40 [Human herpesvirus 1] gi|30960411|gb|AAP38946.1| UL40 [Human herpesvirus 1] gi|30960414|gb|AAP38948.1| UL40 [Human herpesvirus 1] gi|30960417|gb|AAP38950.1| UL40 [Human herpesvirus 1] gi|30960432|gb|AAP38960.1| UL40 [Human herpesvirus 1] gi|30960435|gb|AAP38962.1| UL40 [Human herpesvirus 1] gi|30960438|gb|AAP38964.1| UL40 [Human herpesvirus 1] gi|30960441|gb|AAP38966.1| UL40 [Human herpesvirus 1] gi|30960444|gb|AAP38968.1| UL40 [Human herpesvirus 1] gi|30960447|gb|AAP38970.1| UL40 [Human herpesvirus 1] gi|30960450|gb|AAP38972.1| UL40 [Human herpesvirus 1] gi|30960453|gb|AAP38974.1| UL40 [Human herpesvirus 1] gi|30960456|gb|AAP38976.1| UL40 [Human herpesvirus 1] gi|30960459|gb|AAP38978.1| UL40 [Human herpesvirus 1] gi|30960462|gb|AAP38980.1| UL40 [Human herpesvirus 1] gi|30960471|gb|AAP38986.1| UL40 [Human herpesvirus 1] gi|30960474|gb|AAP38988.1| UL40 [Human herpesvirus 1] gi|30960477|gb|AAP38990.1| UL40 [Human herpesvirus 1] gi|30960480|gb|AAP38992.1| UL40 [Human herpesvirus 1] gi|30960483|gb|AAP38994.1| UL40 [Human herpesvirus 1] gi|30960486|gb|AAP38996.1| UL40 [Human herpesvirus 1] gi|30960489|gb|AAP38998.1| UL40 [Human herpesvirus 1] gi|30960495|gb|AAP39002.1| UL40 [Human herpesvirus 1] gi|30960498|gb|AAP39004.1| UL40 [Human herpesvirus 1] gi|30960501|gb|AAP39006.1| UL40 [Human herpesvirus 1] gi|30960504|gb|AAP39008.1| UL40 [Human herpesvirus 1] gi|30960507|gb|AAP39010.1| UL40 [Human herpesvirus 1] gi|30960510|gb|AAP39012.1| UL40 [Human herpesvirus 1] gi|30960513|gb|AAP39014.1| UL40 [Human herpesvirus 1] gi|30960516|gb|AAP39016.1| UL40 [Human herpesvirus 1] gi|30960519|gb|AAP39018.1| UL40 [Human herpesvirus 1] gi|30960522|gb|AAP39020.1| UL40 [Human herpesvirus 1] gi|30960528|gb|AAP39024.1| UL40 [Human herpesvirus 1] gi|30960531|gb|AAP39026.1| UL40 [Human herpesvirus 1] gi|30960534|gb|AAP39028.1| UL40 [Human herpesvirus 1] gi|30960537|gb|AAP39030.1| UL40 [Human herpesvirus 1] gi|30960540|gb|AAP39032.1| UL40 [Human herpesvirus 1] gi|30960543|gb|AAP39034.1| UL40 [Human herpesvirus 1] gi|30960546|gb|AAP39036.1| UL40 [Human herpesvirus 1] gi|30960549|gb|AAP39038.1| UL40 [Human herpesvirus 1] gi|30960552|gb|AAP39040.1| UL40 [Human herpesvirus 1] gi|30960555|gb|AAP39042.1| UL40 [Human herpesvirus 1] gi|30960558|gb|AAP39044.1| UL40 [Human herpesvirus 1] gi|30960561|gb|AAP39046.1| UL40 [Human herpesvirus 1] gi|30960564|gb|AAP39048.1| UL40 [Human herpesvirus 1] gi|30960567|gb|AAP39050.1| UL40 [Human herpesvirus 1] gi|30960570|gb|AAP39052.1| UL40 [Human herpesvirus 1] gi|30960573|gb|AAP39054.1| UL40 [Human herpesvirus 1] gi|30960576|gb|AAP39056.1| UL40 [Human herpesvirus 1] gi|30960579|gb|AAP39058.1| UL40 [Human herpesvirus 1] gi|30960582|gb|AAP39060.1| UL40 [Human herpesvirus 1] gi|30960585|gb|AAP39062.1| UL40 [Human herpesvirus 1] gi|30960588|gb|AAP39064.1| UL40 [Human herpesvirus 1] gi|30960591|gb|AAP39066.1| UL40 [Human herpesvirus 1] gi|30960594|gb|AAP39068.1| UL40 [Human herpesvirus 1] gi|30960597|gb|AAP39070.1| UL40 [Human herpesvirus 1] gi|30960600|gb|AAP39072.1| UL40 [Human herpesvirus 1] gi|30960603|gb|AAP39074.1| UL40 [Human herpesvirus 1] gi|30960606|gb|AAP39076.1| UL40 [Human herpesvirus 1] gi|30960609|gb|AAP39078.1| UL40 [Human herpesvirus 1] gi|30960612|gb|AAP39080.1| UL40 [Human herpesvirus 1] gi|30960615|gb|AAP39082.1| UL40 [Human herpesvirus 1] gi|30960618|gb|AAP39084.1| UL40 [Human herpesvirus 1] gi|30960621|gb|AAP39086.1| UL40 [Human herpesvirus 1] gi|30960624|gb|AAP39088.1| UL40 [Human herpesvirus 1] gi|30960627|gb|AAP39090.1| UL40 [Human herpesvirus 1] gi|30960630|gb|AAP39092.1| UL40 [Human herpesvirus 1] gi|30960633|gb|AAP39094.1| UL40 [Human herpesvirus 1] gi|30960636|gb|AAP39096.1| UL40 [Human herpesvirus 1] gi|30960639|gb|AAP39098.1| UL40 [Human herpesvirus 1] gi|30960642|gb|AAP39100.1| UL40 [Human herpesvirus 1] gi|30960645|gb|AAP39102.1| UL40 [Human herpesvirus 1] gi|30960648|gb|AAP39104.1| UL40 [Human herpesvirus 1] gi|30960651|gb|AAP39106.1| UL40 [Human herpesvirus 1] gi|30960657|gb|AAP39110.1| UL40 [Human herpesvirus 1] gi|30960660|gb|AAP39112.1| UL40 [Human herpesvirus 1] gi|30960663|gb|AAP39114.1| UL40 [Human herpesvirus 1] gi|30960666|gb|AAP39116.1| UL40 [Human herpesvirus 1] gi|30960669|gb|AAP39118.1| UL40 [Human herpesvirus 1] gi|30960672|gb|AAP39120.1| UL40 [Human herpesvirus 1] gi|30960675|gb|AAP39122.1| UL40 [Human herpesvirus 1] gi|30960678|gb|AAP39124.1| UL40 [Human herpesvirus 1] gi|30960681|gb|AAP39126.1| UL40 [Human herpesvirus 1] gi|30960684|gb|AAP39128.1| UL40 [Human herpesvirus 1] gi|30960687|gb|AAP39130.1| UL40 [Human herpesvirus 1] gi|30960690|gb|AAP39132.1| UL40 [Human herpesvirus 1] gi|30960693|gb|AAP39134.1| UL40 [Human herpesvirus 1] gi|30960696|gb|AAP39136.1| UL40 [Human herpesvirus 1] gi|30960699|gb|AAP39138.1| UL40 [Human herpesvirus 1] gi|30960702|gb|AAP39140.1| UL40 [Human herpesvirus 1] gi|30960711|gb|AAP39146.1| UL40 [Human herpesvirus 1] gi|30960714|gb|AAP39148.1| UL40 [Human herpesvirus 1] gi|30960717|gb|AAP39150.1| UL40 [Human herpesvirus 1] gi|30960720|gb|AAP39152.1| UL40 [Human herpesvirus 1] gi|30960723|gb|AAP39154.1| UL40 [Human herpesvirus 1] gi|30960726|gb|AAP39156.1| UL40 [Human herpesvirus 1] gi|30960732|gb|AAP39160.1| UL40 [Human herpesvirus 1] gi|30960735|gb|AAP39162.1| UL40 [Human herpesvirus 1] gi|30960738|gb|AAP39164.1| UL40 [Human herpesvirus 1] gi|30960741|gb|AAP39166.1| UL40 [Human herpesvirus 1] gi|30960744|gb|AAP39168.1| UL40 [Human herpesvirus 1] gi|30960747|gb|AAP39170.1| UL40 [Human herpesvirus 1] gi|30960750|gb|AAP39172.1| UL40 [Human herpesvirus 1] gi|30960756|gb|AAP39176.1| UL40 [Human herpesvirus 1] gi|30960759|gb|AAP39178.1| UL40 [Human herpesvirus 1] gi|30960762|gb|AAP39180.1| UL40 [Human herpesvirus 1] gi|30960765|gb|AAP39182.1| UL40 [Human herpesvirus 1] gi|30960768|gb|AAP39184.1| UL40 [Human herpesvirus 1] gi|30960771|gb|AAP39186.1| UL40 [Human herpesvirus 1] gi|30960774|gb|AAP39188.1| UL40 [Human herpesvirus 1] gi|30960780|gb|AAP39192.1| UL40 [Human herpesvirus 1] gi|30960783|gb|AAP39194.1| UL40 [Human herpesvirus 1] gi|30960786|gb|AAP39196.1| UL40 [Human herpesvirus 1] gi|30960789|gb|AAP39198.1| UL40 [Human herpesvirus 1] gi|30960792|gb|AAP39200.1| UL40 [Human herpesvirus 1] gi|30960795|gb|AAP39202.1| UL40 [Human herpesvirus 1] gi|30960798|gb|AAP39204.1| UL40 [Human herpesvirus 1] gi|30960801|gb|AAP39206.1| UL40 [Human herpesvirus 1] gi|30960804|gb|AAP39208.1| UL40 [Human herpesvirus 1] gi|30960807|gb|AAP39210.1| UL40 [Human herpesvirus 1] gi|30960810|gb|AAP39212.1| UL40 [Human herpesvirus 1] gi|30960816|gb|AAP39216.1| UL40 [Human herpesvirus 1] gi|30960822|gb|AAP39220.1| UL40 [Human herpesvirus 1] gi|30960825|gb|AAP39222.1| UL40 [Human herpesvirus 1] gi|30960828|gb|AAP39224.1| UL40 [Human herpesvirus 1] gi|30960834|gb|AAP39228.1| UL40 [Human herpesvirus 1] gi|30960840|gb|AAP39232.1| UL40 [Human herpesvirus 1] gi|30960843|gb|AAP39234.1| UL40 [Human herpesvirus 1] gi|30960846|gb|AAP39236.1| UL40 [Human herpesvirus 1] gi|30960849|gb|AAP39238.1| UL40 [Human herpesvirus 1] gi|30960852|gb|AAP39240.1| UL40 [Human herpesvirus 1] gi|30960855|gb|AAP39242.1| UL40 [Human herpesvirus 1] gi|30960858|gb|AAP39244.1| UL40 [Human herpesvirus 1] Length = 307 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 7/119 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N K + + +A +EI + P L+ Sbjct: 186 RDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241 Query: 62 APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + E Y++F A+R I ++PLF + ++ K NFFE R T Y Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA 300 >gi|30960420|gb|AAP38952.1| UL40 [Human herpesvirus 1] gi|30960423|gb|AAP38954.1| UL40 [Human herpesvirus 1] gi|30960426|gb|AAP38956.1| UL40 [Human herpesvirus 1] gi|30960465|gb|AAP38982.1| UL40 [Human herpesvirus 1] gi|30960525|gb|AAP39022.1| UL40 [Human herpesvirus 1] Length = 307 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 7/119 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N K + + +A +EI + P L+ Sbjct: 186 RDEAVHTTASCYIYNNYLSG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241 Query: 62 APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + E Y++F A+R I ++PLF + ++ K NFFE R T Y Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA 300 >gi|30960429|gb|AAP38958.1| UL40 [Human herpesvirus 1] gi|30960468|gb|AAP38984.1| UL40 [Human herpesvirus 1] Length = 307 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 7/119 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N K + + +A +EI + P L+ Sbjct: 186 RDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241 Query: 62 APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + E Y++F A+R I ++PLF + ++ K NFFE R T Y Sbjct: 242 PAALVAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA 300 >gi|30960837|gb|AAP39230.1| UL40 [Human herpesvirus 1] Length = 307 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 7/119 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N K + + +A +EI + P L+ Sbjct: 186 RDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241 Query: 62 APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + E Y++F A+R I ++PLF + ++ K NFFE R T Y Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA 300 >gi|30960705|gb|AAP39142.1| UL40 [Human herpesvirus 1] gi|30960777|gb|AAP39190.1| UL40 [Human herpesvirus 1] Length = 307 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 7/119 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N K + + +A +EI + P L+ Sbjct: 186 RDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241 Query: 62 APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + E Y++F A+R I ++PLF + ++ K NFFE R T Y Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA 300 >gi|30960708|gb|AAP39144.1| UL40 [Human herpesvirus 1] Length = 307 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 7/119 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N K + + +A +EI + P L+ Sbjct: 186 RDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241 Query: 62 APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + E Y++F A+R I ++PLF + ++ K NFFE R T Y Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA 300 >gi|30960753|gb|AAP39174.1| UL40 [Human herpesvirus 1] Length = 307 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 7/119 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N K + + +A +EI + P L+ Sbjct: 186 RDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241 Query: 62 APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + E Y++F A+R I ++PLF + ++ K NFFE R T Y Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA 300 >gi|34419511|ref|NP_899524.1| aerobic ribonucleoside diphosphate reductase small subunit [Vibrio phage KVP40] gi|34333192|gb|AAQ64347.1| aerobic ribonucleoside diphosphate reductase small subunit [Vibrio phage KVP40] Length = 374 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 5/105 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE LHL +I+ + E Q ++ + + E +AH +G Sbjct: 235 RDEQLHLKGTQALISIWQNYKDDPEMAEISLRLQPEAEKIFMQVVDQEKEWAHSLFSQGT 294 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101 GLNA +Y++++A+ R +GL + ++P PW+ + ++ Sbjct: 295 VPGLNAQILCEYVEYLADSRMRSVGLNSPYPRRKHPLPWIRKWLN 339 >gi|30960654|gb|AAP39108.1| UL40 [Human herpesvirus 1] Length = 307 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 7/119 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N K + + +A +EI + P L+ Sbjct: 186 RDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241 Query: 62 APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + E Y++F A+R I ++PLF + ++ K NFFE R T Y Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA 300 >gi|30960729|gb|AAP39158.1| UL40 [Human herpesvirus 1] Length = 307 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 7/119 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N K + + +A +EI + P L+ Sbjct: 186 RDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241 Query: 62 APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + E Y++F A+R I ++PLF + ++ K NFFE R T Y Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA 300 >gi|86140897|ref|ZP_01059456.1| ribonucleoside-diphosphate reductase, beta subunit 1 [Leeuwenhoekiella blandensis MED217] gi|85832839|gb|EAQ51288.1| ribonucleoside-diphosphate reductase, beta subunit 1 [Leeuwenhoekiella blandensis MED217] Length = 427 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 4/122 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62 E +H +FG+D+IN IK ENP + +E + M + E KG + L Sbjct: 298 EQIHGDFGVDIINIIKKENPEWFDEEHNNLIKEMCLNSFEAESKVVDWIFEKGELDFLPK 357 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQQG 119 ++++ N+ IGLE LF E W + I K +FF R Y + Sbjct: 358 AVINEFLKNRFNKSLEAIGLEKLFDIDEALLQETEWFDDEIIGTKHGDFFVKRSINYSKR 417 Query: 120 AE 121 + Sbjct: 418 TQ 419 >gi|255683173|ref|YP_003084381.1| UL40 [Duck enteritis virus] gi|158343199|gb|ABW35292.1| ribonucleotide reductase subunit 2 [Anatid herpesvirus 1] gi|208401182|gb|ACI26683.1| UL40 [Anatid herpesvirus 1] gi|254839988|gb|ACT83534.1| UL40 [Anatid herpesvirus 1] Length = 355 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 5/123 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N+ + K + + EA LE + P ++ Sbjct: 237 RDETIHTKASCVIYNKHLQKYK----KPSTCRIYKLFSEAVKLECEFLRARAPSDSAIID 292 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + Y++F A+R IGL PLF + + ++ NFFE R T Y G+ Sbjct: 293 TEAICSYVRFNADRLLSDIGLAPLFDEPPPKHDFPLAFMATSQQTNFFERRNTTYA-GSV 351 Query: 122 LKW 124 L Sbjct: 352 LND 354 >gi|257373022|ref|YP_003175796.1| ribonucleotide reductase [Halomicrobium mukohataei DSM 12286] gi|257167746|gb|ACV49438.1| ribonucleotide reductase [Halomicrobium mukohataei DSM 12286] Length = 336 Score = 88.6 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 4/122 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62 E +H FG++++ I+ ENP L+ ++F+++ + +A E+ +G + L Sbjct: 207 EQIHGLFGVELVETIREENPDLFDEDFEEEVQAACQQAFEAEMKILDWIFGEGELEFLPR 266 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQG 119 + +++ N+ +G+EP+F+ E+ W E I + K+ +FF R T Y + Sbjct: 267 AHVDAFLRDRFNQSLENVGVEPIFEPDEDLLEETRWFDEDIMMTKDNDFFSKRSTTYNKH 326 Query: 120 AE 121 A+ Sbjct: 327 AQ 328 >gi|327198722|emb|CCA61423.1| unnamed protein product [Diadromus pulchellus ascovirus 4a] Length = 395 Score = 88.2 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 17/133 (12%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKE-----------FQQKSRTMLHEATLLEIAYAHE 51 DE+ H + I + EN + + + E LE + + Sbjct: 250 DETQHTDGMITLFKIFVDENTECRCNPILGCNCIRPDVLRDTVKKIALEMVRLEDEFINL 309 Query: 52 TMPKG-----FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKE 105 + F+ ++ +QY++FIAN+R + + F + ++NP P +I+ Sbjct: 310 AYDEYADDEVFMNISKTKLKQYIRFIANKRMEAMRYDHPFPEASDNPLPEFEIMINAPIN 369 Query: 106 KNFFETRVTEYQQ 118 NFFE R T+Y + Sbjct: 370 TNFFENRSTDYAR 382 >gi|90407600|ref|ZP_01215781.1| ribonucleoside-diphosphate reductase beta chain [Psychromonas sp. CNPT3] gi|90311303|gb|EAS39407.1| ribonucleoside-diphosphate reductase beta chain [Psychromonas sp. CNPT3] Length = 424 Score = 87.8 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 4/121 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62 E LH NFGID+I IK ENP + +E+QQ RT+ +A E +G + + Sbjct: 295 EQLHGNFGIDLIQIIKQENPSWFNEEYQQSVRTLCLQAFKSESKIIDWIYAEGELDFIPK 354 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQQG 119 +++++ N+ I +E +F+ E W + I K +FF R Y + Sbjct: 355 AQVKEFIKNRFNQSLQSIDIEKVFEIDEKLLEKTEWFDDEIIGTKHGDFFVKRSINYNKR 414 Query: 120 A 120 + Sbjct: 415 S 415 >gi|261868068|ref|YP_003255990.1| ribonucleoside-diphosphate reductase subunit beta [Aggregatibacter actinomycetemcomitans D11S-1] gi|293389919|ref|ZP_06634253.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter actinomycetemcomitans D7S-1] gi|261413400|gb|ACX82771.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter actinomycetemcomitans D11S-1] gi|290950453|gb|EFE00572.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter actinomycetemcomitans D7S-1] Length = 329 Score = 87.4 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 4/119 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62 E +H FGI + + ++ E P L+T EF + + + +A E A G + L+ Sbjct: 200 EEIHGRFGISLYHLLREEQPELFTDEFYAELKELAEQAFNAEKAILDWIFEDGELSFLSK 259 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQ 118 + E Y+ N +GLEP++ + W I KE +FF R T+Y + Sbjct: 260 ATVENYIANRYNNSLVTLGLEPIYNISPAQLKETEWFDIEILSTKETDFFNKRSTDYSK 318 >gi|295134784|ref|YP_003585460.1| ribonucleotide reductase [Zunongwangia profunda SM-A87] gi|294982799|gb|ADF53264.1| ribonucleotide reductase [Zunongwangia profunda SM-A87] Length = 324 Score = 87.0 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 4/120 (3%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGLN 61 DE +H N GI +INQI+ E P + +E +K ++ + +E G +N Sbjct: 194 DEQIHANAGIYIINQIREEYPDYFNEEMTRKLTDVVTRSIEVEEEILDWIFENGQLENIN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + +M+F + IGL + T P W E + +FF R +Y + Sbjct: 254 KKNLMDFMKFRLDDSLKSIGLPKQYNITAAEYQPMLWFEEEVFANSLDDFFARRPVDYTK 313 >gi|30960492|gb|AAP39000.1| UL40 [Human herpesvirus 1] Length = 307 Score = 87.0 bits (215), Expect = 8e-16, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 45/119 (37%), Gaps = 7/119 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + K + + +A +EI + P L+ Sbjct: 186 RDEAVHTTASCYIYTNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241 Query: 62 APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + E Y++F A+R I ++PLF + ++ K NFFE R T Y Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA 300 >gi|82492124|gb|ABB77921.1| ribonucleotide reductase beta chain [Environmental halophage 1 AAJ-2005] Length = 358 Score = 86.6 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 4/122 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62 E +H FG +++ I+ ENP L+ +F + + +A E + G + L Sbjct: 229 EQIHGLFGQELVETIREENPDLFDDDFTDEIQDACQQAYEAESEILDWILEDGELDFLPR 288 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQG 119 + +++ N+ G++P+F E+ W E I + KE +FF R T Y + Sbjct: 289 EHIDAFLKDRFNQSLDNAGVDPVFDPDEDVVDETRWFDEDIMMTKENDFFSKRSTTYNKH 348 Query: 120 AE 121 + Sbjct: 349 TQ 350 >gi|13242410|ref|NP_077433.1| ribonucleotide reductase subunit 2 [Cercopithecine herpesvirus 9] gi|11036562|gb|AAG27191.1|AF275348_11 ribonucleotide reductase, small subunit [Cercopithecine herpesvirus 9] Length = 311 Score = 86.6 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 47/123 (38%), Gaps = 5/123 (4%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + + N K + + EA +E + PK +N Sbjct: 193 RDEAVHTSASCCIYNNYI----SYKEKPAIPRIHQLFMEAVNIECNFISAYAPKNQRIIN 248 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 + QY+++ A+R I + LF + + +K NFFE T Y GA Sbjct: 249 IDAILQYVRYNADRLLSAINIPVLFNAPAPKADFPLAFMTAEKHTNFFERHSTAY-TGAV 307 Query: 122 LKW 124 + Sbjct: 308 IND 310 >gi|149369595|ref|ZP_01889447.1| ribonucleoside-diphosphate reductase, beta subunit [unidentified eubacterium SCB49] gi|149357022|gb|EDM45577.1| ribonucleoside-diphosphate reductase, beta subunit [unidentified eubacterium SCB49] Length = 424 Score = 86.6 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 4/122 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62 E +H +FGID+I +K E+P +T E+ + + + +A E+ +G + L Sbjct: 295 EQIHGDFGIDLILILKDEHPEWFTPEYHENIKRLCLDAYEAEVDLVDWIFEEGELDFLPK 354 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQQG 119 ++++ N+ IG+E +F E W + I K +FF R Y + Sbjct: 355 TVINEFLKNRFNKSLESIGVEKVFDVDEALVIQTEWFDDEIIGTKHGDFFVKRSVNYSKR 414 Query: 120 AE 121 + Sbjct: 415 TQ 416 >gi|327198239|ref|YP_004306815.1| putative ribonucleotide reductase B subunit [Pseudomonas phage KPP10] gi|297591765|dbj|BAJ09185.1| putative ribonucleotide reductase B subunit [Pseudomonas phage KPP10] Length = 339 Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 2/124 (1%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GLN 61 DE+ H+ I V+ ++ + Q+ R ++ + E+ Y KG L Sbjct: 202 DETDHVEKNIRVLKAMRKDLTPEENAILDQEIRYLIEDYREAEVKYLVLAFEKGPQHDLT 261 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +Y+ ++ R + L + ENP PWM +I+ + NFFE +VT+Y ++ Sbjct: 262 FEQTVEYIDYLCRLRLFECELLKEHQVGENPLPWMEWMINAARHDNFFEKKVTDYS-HSK 320 Query: 122 LKWD 125 L D Sbjct: 321 LSGD 324 >gi|238695114|ref|YP_002922308.1| aerobic NDP reductase small subunit [Enterobacteria phage JSE] gi|220029250|gb|ACL78185.1| aerobic NDP reductase small subunit [Enterobacteria phage JSE] Length = 388 Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 47/111 (42%), Gaps = 5/111 (4%) Query: 2 RDESLHLNFGIDVINQIK----IENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE LHL +I Q + + +E + ++ + + E + G Sbjct: 248 RDEQLHLKGTQYIIRQWQTGVDGDEWKQIAEELEGEATKIFLDVVEQEKEWVDHLFAMGA 307 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107 L+ + Y++++A+ R GL+ F +P PWM + ++ + +N Sbjct: 308 IPNLSPEILKTYVEYLADSRMRAAGLKSPFSVRRHPLPWMRKWLNSDEVQN 358 >gi|157311531|ref|YP_001469574.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage Phi1] gi|149380735|gb|ABR24740.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage Phi1] Length = 386 Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 47/111 (42%), Gaps = 5/111 (4%) Query: 2 RDESLHLNFGIDVINQIK----IENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE LHL +I Q + + +E + ++ + + E + G Sbjct: 246 RDEQLHLKGTQYIIRQWQTGADGDEWKQIAEELEGEATKIFLDVVEQEKEWVDHLFAMGA 305 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107 L+ + Y++++A+ R GL+ F +P PWM + ++ + +N Sbjct: 306 IPNLSPEILKTYVEYLADSRMRAAGLKSPFSVRRHPLPWMRKWLNSDEVQN 356 >gi|33620698|ref|NP_891801.1| aerobic NDP reductase small subunit [Enterobacteria phage RB49] gi|33438568|gb|AAL15125.2| aerobic NDP reductase small subunit [Enterobacteria phage RB49] Length = 386 Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 47/111 (42%), Gaps = 5/111 (4%) Query: 2 RDESLHLNFGIDVINQIK----IENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE LHL +I Q + + +E + ++ + + E + G Sbjct: 246 RDEQLHLKGTQYIIRQWQTGVDGDEWKQIAEELEGEATKIFLDVVEQEKEWVDHLFAMGA 305 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107 L+ + Y++++A+ R GL+ F +P PWM + ++ + +N Sbjct: 306 IPNLSPEILKTYVEYLADSRMRAAGLKSPFSVRRHPLPWMRKWLNSDEVQN 356 >gi|76803441|ref|YP_327710.1| ribonucleoside-diphosphate reductase, beta subunit 1 [Natronomonas pharaonis DSM 2160] gi|76559256|emb|CAI50863.1| ribonucleoside-diphosphate reductase, beta subunit 1 [Natronomonas pharaonis DSM 2160] Length = 336 Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 60/122 (49%), Gaps = 4/122 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62 E +H FG++++ I+ ENP L+ ++F+++ + A E+ +G + L Sbjct: 207 EQIHGLFGVELVETIREENPDLFDEDFEEEVQAACQRAFEAEMKILDWIFGEGELEFLPR 266 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQG 119 + +++ N+ +G+EP+F+ + W E I + K+ +FF R T Y + Sbjct: 267 THVDAFLRDRFNQSLENVGVEPIFEPDDGLLEETRWFDEDIMMTKDNDFFSKRSTTYNKH 326 Query: 120 AE 121 A+ Sbjct: 327 AQ 328 >gi|323145837|gb|ADX32078.1| hypothetical protein [Pseudomonas phage P3_CHA] gi|323146023|gb|ADX32263.1| hypothetical protein [Pseudomonas phage PAK_P3] Length = 344 Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 2/124 (1%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GLN 61 DE+ H+ I V+ ++ + Q+ R ++ + E+ Y KG L Sbjct: 207 DETDHVEKNIRVLKAMRKDLTPEENSILDQEIRYLIEDYREAEVKYLVLAFEKGPQHDLT 266 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 +Y+ ++ R + L + ENP PWM +I+ + NFFE +VT+Y ++ Sbjct: 267 FEQTVEYIDYLCRLRLFECELLKEHQVGENPLPWMEWMINAARHDNFFEKKVTDYS-HSK 325 Query: 122 LKWD 125 L D Sbjct: 326 LSGD 329 >gi|117530173|ref|YP_851016.1| ribonucleoside-diphosphate reductase beta subunit [Microcystis phage Ma-LMM01] gi|86990305|dbj|BAE79256.1| ribonucleoside-diphosphate reductase beta subunit [Microcystis phage Ma-LMM01] gi|117165785|dbj|BAF36093.1| ribonucleoside-diphosphate reductase beta subunit [Microcystis phage Ma-LMM01] gi|124270949|dbj|BAF45776.1| ribonucleoside-diphosphate reductase beta subunit [Cyanophage Ma-LMM02] gi|124270951|dbj|BAF45777.1| ribonucleoside-diphosphate reductase beta subunit [Cyanophage Ma-LMM03] gi|124270953|dbj|BAF45778.1| ribonucleoside-diphosphate reductase beta subunit [Cyanophage Ma-HPM05] Length = 348 Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 15/134 (11%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++I E +W + + +A EI + + G G+N Sbjct: 218 RDEQTHLKLISNIIRTGLAEGTLMWD---TDEIIDLFRKAAEYEIEWGLH-IGLGVNGIN 273 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKE-----KNFFETRV 113 A + EQY +++ N R IGL +F+ Y+ NP+ + E NFFE+ V Sbjct: 274 ATTIEQYAKYLCNIRARAIGLPTVFEGRQYSRNPYAHLERFAATTGEDSITRDNFFESGV 333 Query: 114 TEYQQGAEL--KWD 125 Y+ A++ WD Sbjct: 334 I-YRNPAKVVDGWD 346 >gi|190896442|gb|ACE96734.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896490|gb|ACE96758.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 213 Score = 85.5 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 7/69 (10%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ EA +E + +++P VG+N Sbjct: 152 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKEAVEIEREFVVDSLPCALVGMN 204 Query: 62 APSCEQYMQ 70 QY++ Sbjct: 205 GELMSQYIE 213 >gi|190896432|gb|ACE96729.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896434|gb|ACE96730.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896436|gb|ACE96731.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896438|gb|ACE96732.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896440|gb|ACE96733.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896444|gb|ACE96735.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896446|gb|ACE96736.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896448|gb|ACE96737.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896450|gb|ACE96738.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896452|gb|ACE96739.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896454|gb|ACE96740.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896456|gb|ACE96741.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896458|gb|ACE96742.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896460|gb|ACE96743.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896462|gb|ACE96744.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896464|gb|ACE96745.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896466|gb|ACE96746.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896468|gb|ACE96747.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896470|gb|ACE96748.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896472|gb|ACE96749.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896474|gb|ACE96750.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896476|gb|ACE96751.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896478|gb|ACE96752.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896482|gb|ACE96754.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896484|gb|ACE96755.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896486|gb|ACE96756.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896488|gb|ACE96757.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896492|gb|ACE96759.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896494|gb|ACE96760.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896496|gb|ACE96761.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896498|gb|ACE96762.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896500|gb|ACE96763.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896502|gb|ACE96764.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896504|gb|ACE96765.1| ribonucleotide reductase beta subunit [Populus tremula] gi|190896506|gb|ACE96766.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 213 Score = 85.5 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 7/69 (10%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ EA +E + +++P VG+N Sbjct: 152 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKEAVEIEREFVVDSLPCALVGMN 204 Query: 62 APSCEQYMQ 70 QY++ Sbjct: 205 GELMSQYIE 213 >gi|190896480|gb|ACE96753.1| ribonucleotide reductase beta subunit [Populus tremula] Length = 213 Score = 84.3 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 7/69 (10%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + + ++ K +++ + ++ EA +E + +++P VG+N Sbjct: 152 RDEGLHCDFACLLYSLLRK-------KLGEERVKGIVKEAVEIEREFVVDSLPCALVGMN 204 Query: 62 APSCEQYMQ 70 QY++ Sbjct: 205 GELMSQYIE 213 >gi|121730673|ref|ZP_01682814.1| ATP-dependent Zn proteases [Vibrio cholerae V52] gi|121627739|gb|EAX60372.1| ATP-dependent Zn proteases [Vibrio cholerae V52] Length = 129 Score = 84.3 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 6/94 (6%) Query: 14 VINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGLNAPSCEQY 68 ++N ++ +E +Q+S + EA E +A G +GLN QY Sbjct: 1 MLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAEYLFKDGSMIGLNKDILCQY 60 Query: 69 MQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID 101 +++I N R +GLEP + NP PW++ + Sbjct: 61 VEYITNIRMQAVGLEPAYPAATNNPIPWINAWLS 94 >gi|167957419|ref|ZP_02544493.1| ribonucleotide-diphosphate reductase subunit beta [candidate division TM7 single-cell isolate TM7c] Length = 277 Score = 84.3 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 29/66 (43%), Positives = 40/66 (60%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+LHL FGI+++ I ENP L EF + R ++ +A LE AY + +P G +GLN Sbjct: 212 RDENLHLEFGINLLLTILHENPDLQDPEFADEIRNLILQAVELEEAYNRDMLPNGILGLN 271 Query: 62 APSCEQ 67 A Q Sbjct: 272 ADYVNQ 277 >gi|294338336|emb|CBJ94375.1| Probable ribonucleotide reductase (small subunit) [Campylobacter phage CPt10] Length = 369 Score = 84.3 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 5/108 (4%) Query: 2 RDESLHLNFGIDVINQIK---IENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 RDE+LHL ++I + E + EA E + KG F Sbjct: 226 RDENLHLAITQNLIKILSRSPEEGFINAWNSIKDNITDRYLEAADQEFKWIDYLFSKGAF 285 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK 104 +G+ + Y++++ N+R IG + +F + +NP PW+ I+ K Sbjct: 286 LGMTPELAKNYIKYLINKRLKAIGFKEVFAGFNKNPIPWVETYINYDK 333 >gi|294338139|emb|CBJ93977.1| Probable ribonucleotide reductase (small subunit) [Campylobacter phage CP220] Length = 369 Score = 83.9 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 5/108 (4%) Query: 2 RDESLHLNFGIDVINQIK---IENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 RDE+LHL ++I + E + EA E + KG F Sbjct: 226 RDENLHLAITQNLIKILSRSPEEGFINAWNSIKDNITDRYLEAADQEFKWIDYLFSKGAF 285 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK 104 +G+ + Y++++ N+R IG + +F + +NP PW+ I+ K Sbjct: 286 LGMTPELAKNYIKYLINKRLKAIGFKEVFAGFNKNPIPWVETYINYDK 333 >gi|148688625|gb|EDL20572.1| mCG1032193 [Mus musculus] Length = 150 Score = 83.9 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 7/68 (10%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K +Q+ + ++ A +E + E +P +G++ Sbjct: 65 RDEGLHWDFACLMFK-------HLAHKPSEQRVKEIITTAVRIEQEFLTEALPVKLIGMS 117 Query: 62 APSCEQYM 69 +QY+ Sbjct: 118 CTLMKQYI 125 >gi|251792578|ref|YP_003007304.1| ribonucleoside-diphosphate reductase subunit beta [Aggregatibacter aphrophilus NJ8700] gi|247533971|gb|ACS97217.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter aphrophilus NJ8700] Length = 329 Score = 83.5 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 4/119 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62 E +H FGI + + ++ E P L+T F + + + +A E + G + L+ Sbjct: 200 EEIHGRFGITLYSILREEQPELFTDAFFTELKELADQAFTAEKEILNWIFEDGELDFLSK 259 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQ 118 + E Y+ N +GLEP + W I KE +FF R T+Y + Sbjct: 260 ATVENYIANRYNNSLQALGLEPAYNINPEQLKETEWFDIEILSTKETDFFNKRSTDYSK 318 >gi|295698298|ref|YP_003602953.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus Riesia pediculicola USDA] gi|291156973|gb|ADD79418.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus Riesia pediculicola USDA] Length = 375 Score = 83.5 bits (206), Expect = 9e-15, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 6/121 (4%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LH+ +IN ++ E+ + +KE + + + E +A G Sbjct: 236 RDEALHVTGTQHMINIMQSSKEDKEMIEISKECLMICQKIFLNVSDQEKRWADYLFSNGN 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115 +GLN ++Y+ +I R IGL+ NP PW++ + ++ ET V+ Sbjct: 296 LIGLNKKILKEYIDYITEVRMRAIGLKKDLIKKINPIPWINAWLSSDNIQSAPQETEVSS 355 Query: 116 Y 116 Y Sbjct: 356 Y 356 >gi|168702485|ref|ZP_02734762.1| ribonucleotide-diphosphate reductase small chain [Gemmata obscuriglobus UQM 2246] Length = 70 Score = 83.5 bits (206), Expect = 9e-15, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 2/63 (3%) Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 GL+ Y ++ A+RR +G+ P+F T+NPF +M + D+++ NFFE RV+ Y Sbjct: 1 MAGLSCRDLRSYPEYAADRRLESLGIAPVF-GTKNPFGFMD-LQDVQELTNFFERRVSAY 58 Query: 117 QQG 119 Q G Sbjct: 59 QLG 61 >gi|256422447|ref|YP_003123100.1| ribonucleotide reductase [Chitinophaga pinensis DSM 2588] gi|256037355|gb|ACU60899.1| ribonucleotide reductase [Chitinophaga pinensis DSM 2588] Length = 324 Score = 83.2 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 4/120 (3%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGLN 61 DE +H N GI +IN+I+ E P ++ + + ++ E+ +E +G ++ Sbjct: 194 DEQIHANAGIYLINKIREEYPEMFDEATITRVSNLVKESIEVESNILDWIFSEGKIDTVS 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +M++ A+ +I L LF + P W E + +FF R +Y + Sbjct: 254 KEHLVNFMKYRADDSLKKINLPALFNISTEDNKPMLWFEEEVFANSLDDFFAKRPVDYTK 313 >gi|330004285|ref|ZP_08304843.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp. MS 92-3] gi|328536657|gb|EGF62979.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp. MS 92-3] Length = 380 Score = 83.2 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 6/105 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLHEATLLEIAYAHETMPKG- 56 RDE+LH ++ ++ L K+ ++ + + E+ +A G Sbjct: 239 RDEALHCEGTERMLRNMRNGREGLLWKQIAEEEEPFVYQTMLDVAEQEMRWADYLFKDGS 298 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVI 100 +GLNA +QY+++ N ++ L PLF +P PWM+ + Sbjct: 299 MIGLNAKILKQYVKYRTNLAMKRLHLNPLFDDVTFDPLPWMNSWL 343 >gi|57790965|ref|YP_182369.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 1] gi|5918981|gb|AAD56212.1|AF168792_13 ribonucleotide reductase small subunit [Gallid herpesvirus 1] Length = 310 Score = 82.8 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 48/116 (41%), Gaps = 4/116 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N ++ K ++ + EA +E + P+ ++ Sbjct: 192 RDEAVHTTASCRIYNNWLGDHK----KPSAKRIHQLFKEAIEIECNFLASRAPQASRLID 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + + ++++ +R IG+ +F + ++ + K NFFE R T Y Sbjct: 248 LEAIQSFVRYSGDRLLTAIGVPTIFDEPPPDPSFPLTLMSIDKNVNFFEHRSTAYN 303 >gi|329738368|gb|AEB97332.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 1] Length = 310 Score = 82.8 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 48/116 (41%), Gaps = 4/116 (3%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE++H + N ++ K ++ + EA +E + P+ ++ Sbjct: 192 RDEAVHTTASCRIYNNWLGDHK----KPSAKRIHQLFKEAIEIECNFLASRAPQASRLID 247 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + + ++++ +R IG+ +F + ++ + K NFFE R T Y Sbjct: 248 LEAIQSFVRYSGDRLLTAIGVPTIFDEPPPDPSFPLTLMSIDKNVNFFEHRSTAYN 303 >gi|319957101|ref|YP_004168364.1| ribonucleoside-diphosphate reductase [Nitratifractor salsuginis DSM 16511] gi|319419505|gb|ADV46615.1| Ribonucleoside-diphosphate reductase [Nitratifractor salsuginis DSM 16511] Length = 337 Score = 82.4 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 7/124 (5%) Query: 2 RDE-SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59 RDE + HL ++ I EN K+ M+ EA +E+ Y + +G Sbjct: 210 RDEINTHLPLFANIFKTIYKENKIP--ASIVDKAYEMIQEAVDIELEYGKYLLENYPIMG 267 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF--PWMSEVIDLKKE-KNFFETRVTEY 116 L E+ + AN R ++IGLEP+F+ T + + + + + NFFE+ V Y Sbjct: 268 LTDELMEKTVYNYANDRLNKIGLEPIFEETPQTYLQKLVEKHLKMNDVRSNFFESNVANY 327 Query: 117 QQGA 120 + + Sbjct: 328 AKNS 331 >gi|152991848|ref|YP_001357569.1| ribonucleoside-diphosphate reductase, beta subunit [Sulfurovum sp. NBC37-1] gi|151423709|dbj|BAF71212.1| ribonucleoside-diphosphate reductase, beta subunit [Sulfurovum sp. NBC37-1] Length = 337 Score = 82.4 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 7/124 (5%) Query: 2 RDE-SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59 RDE + HL ++ I+ EN + + M+ +A +E+ Y H + + +G Sbjct: 210 RDELNTHLPLFANIFKTIQKENNIATS--TIDAAYKMIQDAVKIELEYGHYLLDQFPIMG 267 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF--PWMSEVIDLKK-EKNFFETRVTEY 116 + EQ + AN R +IGL+P+F + + +++ +++ + + NFFE+ V+ Y Sbjct: 268 VTHELMEQTVYNYANDRLKKIGLDPIFDESATTYLQKLVTKHLEMNEVKSNFFESNVSNY 327 Query: 117 QQGA 120 + + Sbjct: 328 AKSS 331 >gi|90018206|gb|ABD83916.1| ribonucleotide reductase M2 polypeptide [Ictalurus punctatus] Length = 139 Score = 82.0 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 7/66 (10%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + HL K + ++++ A +E + + +P +G+N Sbjct: 81 RDEGLHCDFACLMFK-------HLVNKPSEATVKSIIVNAVQIEQEFLTQALPVKLIGMN 133 Query: 62 APSCEQ 67 +Q Sbjct: 134 CDLMKQ 139 >gi|46143780|ref|ZP_00134247.2| COG0208: Ribonucleotide reductase, beta subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 336 Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 5/90 (5%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE LHL +++N I ++P + +E +Q++ + A E +A G Sbjct: 237 RDEYLHLTGTQNMLNIIASGQDDPEMAEIAEECKQEAYDLFVAAAEQEKEWAAYLFKDGS 296 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF 86 +GLN +Y+++I N R +GL F Sbjct: 297 MIGLNEDILVKYVEYITNIRMQAVGLPRPF 326 >gi|319954718|ref|YP_004165985.1| ATP-cone domain protein [Cellulophaga algicola DSM 14237] gi|319423378|gb|ADV50487.1| ATP-cone domain protein [Cellulophaga algicola DSM 14237] Length = 424 Score = 81.6 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 4/122 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62 E +H +FGID+I IK ENP + ++ + + M +A + E + KG + L Sbjct: 295 EQIHGDFGIDIIKIIKKENPDWFDADYHKTIQQMCKDAFIAESSVVDWIFEKGELDFLPK 354 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQQG 119 ++++ N IG+E +F+ E W + I K +FF R Y + Sbjct: 355 DVVNEFIKNRFNNSLESIGIEKIFEVNEELIAETEWFDDEIIGTKHGDFFVKRSINYSKR 414 Query: 120 AE 121 + Sbjct: 415 TQ 416 >gi|307244959|ref|ZP_07527056.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306854124|gb|EFM86332.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 325 Score = 80.8 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 4/119 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62 E +H FGI + ++ E+ L+T EF + +T+ +A E +G + ++ Sbjct: 196 EEIHGKFGIVLYEILREEHSELFTPEFFEDLKTLSSQAFEAECGILDWIFEEGDLSFISR 255 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQ 118 E Y++ N +GLEP + W I KE +FF R T+Y + Sbjct: 256 EEVENYIRSRYNNSLMTLGLEPPYDVNPELLKETEWFDIEILSTKETDFFNKRSTDYSK 314 >gi|53728876|ref|ZP_00348266.1| COG0208: Ribonucleotide reductase, beta subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207635|ref|YP_001052860.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus pleuropneumoniae L20] gi|165975603|ref|YP_001651196.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190149418|ref|YP_001967943.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303249851|ref|ZP_07336055.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303251971|ref|ZP_07338142.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247133|ref|ZP_07529185.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307249355|ref|ZP_07531349.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307251676|ref|ZP_07533581.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307253912|ref|ZP_07535764.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307256172|ref|ZP_07537959.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307258366|ref|ZP_07540107.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307260605|ref|ZP_07542297.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307262736|ref|ZP_07544363.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|126096427|gb|ABN73255.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165875704|gb|ABY68752.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189914549|gb|ACE60801.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302649401|gb|EFL79586.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302651418|gb|EFL81570.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306856382|gb|EFM88533.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306858649|gb|EFM90711.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306860873|gb|EFM92881.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306863116|gb|EFM95058.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865353|gb|EFM97249.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306867550|gb|EFM99397.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306869682|gb|EFN01467.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306871881|gb|EFN03598.1| Ribonucleoside-diphosphate reductase, beta subunit 1 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 325 Score = 80.8 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 4/119 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62 E +H FGI + ++ E+ L+T EF + +T+ +A E +G + ++ Sbjct: 196 EEIHGKFGIALYEILREEHSELFTPEFFEDLKTLSSQAFEAECGILDWIFEEGDLSFISR 255 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQ 118 E Y++ N +GLEP + W I KE +FF R T+Y + Sbjct: 256 EEVENYIRSRYNNSLMTLGLEPPYDVNPELLKETEWFDIEILSTKETDFFNKRSTDYSK 314 >gi|294661479|ref|YP_003579932.1| NrdB ribonucleotide reductase B subunit [Klebsiella phage KP15] gi|292660640|gb|ADE34888.1| NrdB ribonucleotide reductase B subunit [Klebsiella phage KP15] Length = 402 Score = 80.5 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LH I Q+ ++P + ++ ++++ + E E +A G Sbjct: 260 RDEALHQKGTQSKIRLWQMGKDDPEMVEISRRLKKEATAIFLEVYEQEKEWAEHLFSVGD 319 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 G++ S Y++ + ++R +GL+ F NP+PWM++ + Sbjct: 320 VEGVSLKSTIAYIEHLTDQRMRAVGLDSPFTPIPNPYPWMNKWL 363 >gi|322515075|ref|ZP_08068083.1| ribonucleoside-diphosphate reductase beta subunit [Actinobacillus ureae ATCC 25976] gi|322118955|gb|EFX91132.1| ribonucleoside-diphosphate reductase beta subunit [Actinobacillus ureae ATCC 25976] Length = 326 Score = 80.5 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 4/119 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62 E +H FGI + ++ E+ L+T EF ++ +T+ +A E +G + ++ Sbjct: 197 EEIHGKFGIALYEILRDEHSELFTPEFFEELKTLSTQAFEAECGILDWIFEEGDLSFISR 256 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQ 118 + E Y++ N +GLEP + W I KE +FF R T+Y + Sbjct: 257 EAVENYIRSRYNNSLMTLGLEPPYDVNPELLKETEWFDIEILSTKETDFFNKRSTDYSK 315 >gi|255535950|ref|YP_003096321.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Flavobacteriaceae bacterium 3519-10] gi|255342146|gb|ACU08259.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Flavobacteriaceae bacterium 3519-10] Length = 324 Score = 80.5 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 4/120 (3%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGLN 61 DE +H N GI +IN+I+ E P L T + T++ + LE G ++ Sbjct: 194 DEQIHANAGIYLINKIREEQPDLLTDSDIEDIYTLVDHSIELEAEILDWIFEMGEIDNVS 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + +M++ + +IG++ + + + P W E + +FF R +Y + Sbjct: 254 KENLLNFMKYRVDDSLKKIGMQTRYNVSGDEYRPMVWFEEEVFANSMDDFFAKRPVDYTK 313 >gi|293411957|ref|ZP_06654682.1| ribonucleoside-diphosphate reductase [Escherichia coli B354] gi|309797907|ref|ZP_07692288.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 145-7] gi|220980068|emb|CAP72260.1| Ribonucleoside-diphosphate reductase subunit beta [Escherichia coli LF82] gi|291469512|gb|EFF12001.1| ribonucleoside-diphosphate reductase [Escherichia coli B354] gi|308118515|gb|EFO55777.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 145-7] gi|323934216|gb|EGB30640.1| ribonucleotide reductase [Escherichia coli E1520] Length = 380 Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 6/105 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLHEATLLEIAYAHETMPKG- 56 RDE+LH +I ++ L KE + E+ +A G Sbjct: 239 RDEALHCEGTERMIRFMRTGREGLLWKEIAADEENVIYDTMKSVAEQEMNWADYLFKDGS 298 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVI 100 +GLNA + Y+++ N +++GL+ LF + T +P WM++ + Sbjct: 299 MIGLNADILKTYVKYRTNLAMNRLGLKALFPEVTTDPLVWMNKWL 343 >gi|325955614|ref|YP_004239274.1| ribonucleotide reductase [Weeksella virosa DSM 16922] gi|323438232|gb|ADX68696.1| ribonucleotide reductase [Weeksella virosa DSM 16922] Length = 324 Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 52/120 (43%), Gaps = 4/120 (3%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGLN 61 DE +H N GI ++N+IK E P +++E Q+ + ++ + +E +G + Sbjct: 194 DEQIHANAGIYIVNKIKEEFPDFFSEETIQEIKNVVTHSIEVESQILDWIFEQGEIETIK 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +M++ + +IG ++ T P W E + +FF R +Y + Sbjct: 254 KKDLLNFMKYRVDESMLKIGFGKIYNITAEQYQPMVWFEEEVFANSLDDFFAKRPVDYTK 313 >gi|156847976|ref|XP_001646871.1| hypothetical protein Kpol_2002p84 [Vanderwaltozyma polyspora DSM 70294] gi|156117552|gb|EDO19013.1| hypothetical protein Kpol_2002p84 [Vanderwaltozyma polyspora DSM 70294] Length = 351 Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 9/121 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RD LH++F + HL + + + ++ +A +E + +P V L Sbjct: 220 LRDRGLHVDFCCLMY-------AHLKNQIDSEIVQKIIVDAVEIEKKSLLKALPIIKVNL 272 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120 Q+++++A+ G E + T NP+ +M E + L N + + Q+ + Sbjct: 273 KIDEMNQFIEYVADSILVAFGNEKHYNAT-NPYEFM-ENVVLPGNTNSLAKTIADAQKAS 330 Query: 121 E 121 E Sbjct: 331 E 331 >gi|9629834|ref|NP_045318.1| ribonucleotide reductase subunit 2 [Bovine herpesvirus 1] gi|266916|sp|Q01319|RIR2_BHV1C RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|330772|gb|AAA46063.1| ribonucleotide reductase small subunit [Bovine herpesvirus 1] gi|995642|emb|CAA90928.1| UL40 [Bovine herpesvirus 1] gi|1149578|emb|CAA88899.1| UL40 [Bovine herpesvirus 1] gi|2653307|emb|CAA06093.1| ribonucleotide reductase small subunit [Bovine herpesvirus type 1.1] Length = 314 Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 46/127 (36%), Gaps = 15/127 (11%) Query: 2 RDESLHLNFGIDVI-NQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG- 59 RDE++H + N + E P + + EA + G Sbjct: 198 RDEAVHTAASCCIFDNYLGGERP------PPARIYELFREA----WKLSASLFGCAPRGS 247 Query: 60 --LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 L+ + Y+++ A+R I L PLF + ++ +K NFFE R T Y Sbjct: 248 HILDVEAISAYVEYSADRLLAAIQLPPLFGTPPPGTDFPLALMTAEKHTNFFERRSTNY- 306 Query: 118 QGAELKW 124 G + Sbjct: 307 TGTVIND 313 >gi|304373620|ref|YP_003858365.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB16] gi|299829576|gb|ADJ55369.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB16] Length = 391 Score = 78.5 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHLWTKEFQ--QKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LH I Q+ ++P + FQ +++ + E E +A G Sbjct: 249 RDEALHQKGTQSKIRLWQMGKDDPEMAEIAFQYEEEATQIFLEVYEQEKEWAEHLFSIGD 308 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 G++ S Y++ + ++R +GL+ FK + NP+PWM++ + Sbjct: 309 VDGVSLKSTIAYIEHLTDQRMRAVGLQSPFKPSPNPYPWMNKWL 352 >gi|312130784|ref|YP_003998124.1| ribonucleotide reductase [Leadbetterella byssophila DSM 17132] gi|311907330|gb|ADQ17771.1| ribonucleotide reductase [Leadbetterella byssophila DSM 17132] Length = 324 Score = 78.5 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 4/120 (3%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LN 61 DE +H N GI ++N I+ E P + E + + E+ +E +G + + Sbjct: 194 DEQIHANGGIYIVNTIRDEFPDFFDPETITQIEDTVRESIEVEERILDWIFSEGEIEIIK 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +M+F + +IG PLF + P W E + +FF R +Y + Sbjct: 254 KKDLLNFMKFRIDDSMKKIGFSPLFHVSSADYQPIAWFEEEVFANSLDDFFAKRPVDYTK 313 >gi|66391516|ref|YP_239041.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB43] gi|62288604|gb|AAX78587.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB43] Length = 391 Score = 78.5 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 5/104 (4%) Query: 2 RDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LH I Q+ ++P + ++++++ + E E +A G Sbjct: 249 RDEALHQKGTQSKIRLWQMGKDDPEMAEIAYQYEEEATQIFLEVYEQEKEWAEHLFSIGD 308 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 G+ S Y++ + ++R +GL+ FK + NP+PWM++ + Sbjct: 309 VDGVTLKSTIAYIEHLTDQRMRAVGLQSPFKPSPNPYPWMNKWL 352 >gi|167856024|ref|ZP_02478769.1| ribonucleotide-diphosphate reductase subunit alpha [Haemophilus parasuis 29755] gi|219871494|ref|YP_002475869.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus parasuis SH0165] gi|167852863|gb|EDS24132.1| ribonucleotide-diphosphate reductase subunit alpha [Haemophilus parasuis 29755] gi|219691698|gb|ACL32921.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus parasuis SH0165] Length = 325 Score = 78.2 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 4/119 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62 E +H FGI + + E+ L+T EF ++ +T+ +A E +G + ++ Sbjct: 196 EEIHGRFGIALYEILSDEHSELFTPEFFEELKTLSQQAFEAERGILDWIFEEGDLSFISR 255 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQ 118 + E Y+ N +GLEP + W I KE +FF R T+Y + Sbjct: 256 KTVENYIMNRYNNSLSILGLEPPYDVDPELLKETEWFDIEIISTKETDFFNKRSTDYSK 314 >gi|45478633|ref|NP_995489.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis biovar Microtus str. 91001] gi|52788092|ref|YP_093920.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis] gi|145597234|ref|YP_001154698.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis Pestoides F] gi|162417832|ref|YP_001604568.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis Angola] gi|229896974|ref|ZP_04512133.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit [Yersinia pestis Pestoides A] gi|45357286|gb|AAS58680.1| putative ribonucleoside-diphosphate reductase beta subunit [Yersinia pestis biovar Microtus str. 91001] gi|52538021|emb|CAG27446.1| putative ribonucleoside-diphosphate reductase beta subunit [Yersinia pestis] gi|145213002|gb|ABP42407.1| ribonucleoside-diphosphate reductase class Ia beta subunit [Yersinia pestis Pestoides F] gi|162350804|gb|ABX84753.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis Angola] gi|229700010|gb|EEO88050.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit [Yersinia pestis Pestoides A] Length = 380 Score = 78.2 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 6/105 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTK----EFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LH +I ++ L K E + + + E+ +A G Sbjct: 239 RDEALHCEGTERMIRFMRTGREGLMWKMIAAEEESFIYQTMMDVAGQEMRWADYLFKDGS 298 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVI 100 +GLNA + Y+++ N ++GL PLF + ++P WM++ + Sbjct: 299 MIGLNADILKSYVKYRTNLAMRRLGLRPLFPEIKDDPLVWMNKWL 343 >gi|326336655|ref|ZP_08202823.1| ribonucleoside-diphosphate reductase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691125|gb|EGD33096.1| ribonucleoside-diphosphate reductase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 319 Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 5/120 (4%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LN 61 DE +H N GI ++ I ENP TK ++++ + E LLE +G + Sbjct: 190 DEQVHANAGIYILKTIFEENPEFRTKA-KEEATQFIREYILLEDKMLDWIFEEGELDFFT 248 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQQ 118 YM++ + Q+ L F T P W E + + + +FF R T Y + Sbjct: 249 KKDLANYMRYRLDDALTQLDLGKPFGITAEEAKPMLWFEEEVFVNELDDFFAKRPTAYTK 308 >gi|327409820|ref|YP_004347240.1| ribonucleoside-diphosphate reductase small chain [Lausannevirus] gi|326784994|gb|AEA07128.1| ribonucleoside-diphosphate reductase small chain [Lausannevirus] Length = 319 Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 56/123 (45%), Gaps = 3/123 (2%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+LH F + N ++ ++ + Q++ +L A + ++ V ++ Sbjct: 191 RDEALHKKFAEVLYN-FLVDELKVFERVSQERCHEILTSAIEAVTDFIKYSLRLDNVNID 249 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121 A YM+ + + E ++ EN +M +I L+ + NFFE +T+Y +G + Sbjct: 250 ADRMLGYMKRAVDDLATGLKYEKVYN-AENTLDYML-LIGLENKGNFFEGVITDYSKGMD 307 Query: 122 LKW 124 + Sbjct: 308 MGD 310 >gi|257464834|ref|ZP_05629205.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus minor 202] gi|257450494|gb|EEV24537.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus minor 202] Length = 326 Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 4/119 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62 E +H FGI + ++ E+ L+T F ++ +T+ ++A E +G + ++ Sbjct: 197 EEIHGKFGIALYEILRDEHSELFTPAFFEELQTLANQAFEAEKGILDWIFEEGDLSFISK 256 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQ 118 + Y++ N +GLEP W I KE +FF R T+Y + Sbjct: 257 ETVLNYIKSRYNNSLVTLGLEPPHNINPELLKETAWFDIEILSTKETDFFNKRSTDYSK 315 >gi|256820037|ref|YP_003141316.1| ribonucleotide reductase [Capnocytophaga ochracea DSM 7271] gi|315225453|ref|ZP_07867266.1| ribonucleoside-diphosphate reductase [Capnocytophaga ochracea F0287] gi|256581620|gb|ACU92755.1| ribonucleotide reductase [Capnocytophaga ochracea DSM 7271] gi|314944551|gb|EFS96587.1| ribonucleoside-diphosphate reductase [Capnocytophaga ochracea F0287] Length = 319 Score = 77.0 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 5/120 (4%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LN 61 DE LH N GI ++ +I ENP + K ++ + T + LE +G + + Sbjct: 190 DEQLHANAGIYILKKIFEENPEMKAKA-EEDATTFIRSYITLEDKMLDWIFEQGELEFFS 248 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 YM++ + Q+GL F + P W E + + +FF R T Y + Sbjct: 249 KKDLSNYMRYRLDDSLTQLGLGKPFGISGEEAKPMMWFEEEVFSNELDDFFAKRPTAYTK 308 >gi|240950330|ref|ZP_04754600.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus minor NM305] gi|240295141|gb|EER45960.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus minor NM305] Length = 326 Score = 76.6 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 4/119 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62 E +H FGI + ++ E+ L+T F ++ +T+ +A E +G + ++ Sbjct: 197 EEIHGKFGIALYEILRDEHSELFTPAFFEELQTLASQAFEAEKGILDWIFEEGDLSFISK 256 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQ 118 + Y++ N +GLEP W I KE +FF R T+Y + Sbjct: 257 ETVLNYIKSRYNNSLVTLGLEPPHDINPELLKETAWFDIEILSTKETDFFNKRSTDYSK 315 >gi|254362523|ref|ZP_04978626.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia haemolytica PHL213] gi|153094123|gb|EDN75022.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia haemolytica PHL213] Length = 293 Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 4/119 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62 E +H FGI + ++ E+ L+T EF + +T+ ++A E +G + + Sbjct: 164 EEIHGKFGIALYEILRDEHSELFTPEFFEDLQTLANQAFEAERGILDWIFEEGDLSFITK 223 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQ 118 + E Y++ N +GLEP W I KE +FF R T+Y + Sbjct: 224 ATVENYIKNRYNNSLSILGLEPPHDIDPELLKETEWFDIEILSTKETDFFNKRSTDYSK 282 >gi|294505968|ref|YP_003570026.1| Ribonucleoside-diphosphate reductase beta subunit [Salinibacter ruber M8] gi|294342296|emb|CBH23074.1| Ribonucleoside-diphosphate reductase beta subunit [Salinibacter ruber M8] Length = 324 Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 4/119 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62 E +H FG++++N I+ E+P + F+Q+ R EA E G + L Sbjct: 195 EQIHGLFGVELMNIIREEHPEWFGPAFEQEVRAACEEAYDAEQKVLDWIFADGELDFLPR 254 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQQ 118 P + +++ N + ++P+F+ W E I L K +FF R T Y + Sbjct: 255 PVVDAFLRDKFNESLKNVDVDPIFEVDPEHLGETRWFYEEILLTKGNDFFSKRSTSYSK 313 >gi|261494146|ref|ZP_05990649.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261310312|gb|EEY11512.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 325 Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 4/119 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62 E +H FGI + ++ E+ L+T EF + +T+ ++A E +G + + Sbjct: 196 EEIHGKFGIALYEILRDEHSELFTPEFFEDLQTLANQAFEAERGILDWIFEEGDLSFITK 255 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQ 118 + E Y++ N +GLEP W I KE +FF R T+Y + Sbjct: 256 ATVENYIKNRYNNSLSILGLEPPHDIDPELLKETEWFDIEILSTKETDFFNKRSTDYSK 314 >gi|228473186|ref|ZP_04057941.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga gingivalis ATCC 33624] gi|228275336|gb|EEK14128.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga gingivalis ATCC 33624] Length = 319 Score = 76.2 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 5/120 (4%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LN 61 DE +H N GI ++ I ENP TK ++++ + E LLE +G + + Sbjct: 190 DEQVHANAGIYILKTIFDENPEFRTKA-KKEATEFIREYILLEDKMLDWIFEEGELEFFS 248 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQQ 118 YM++ + Q+ L F T P W E + + + +FF R T Y + Sbjct: 249 KKDLANYMRYRLDDALTQLDLGKPFGITAEEAKPMLWFEEEVFVNELDDFFAKRPTAYTK 308 >gi|51518029|ref|YP_067954.1| BaRF1 [Macacine herpesvirus 4] gi|18025480|gb|AAK95424.1| BaRF1 [Macacine herpesvirus 4] Length = 302 Score = 76.2 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 12/120 (10%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH + N + + Q + + A +E A+ E G ++ Sbjct: 186 RDELLHTRAASLLYNSMTA----PADRPGAQWIQELFRTAVEVETAFI-EARGWGVTLVD 240 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + Q+++ A+R IGL PL+ + P +M+ + K+ NFFE +Y Sbjct: 241 VQAIRQFLEATADRILGDIGLPPLYGTPPPRDCPLTYMTSI----KQTNFFEQESADYTM 296 >gi|261885428|ref|ZP_06009467.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 282 Score = 76.2 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 30/66 (45%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE HL ++IN ++ E P L+T E + K M +A LEI + +G Sbjct: 217 RDEITHLLLFQNMINSVRKERPDLFTSEVEAKIYEMFKKAGDLEIEWGKYITGNQIMGFT 276 Query: 62 APSCEQ 67 E+ Sbjct: 277 DDIIEE 282 >gi|48696741|ref|YP_024565.1| ORF20 [Ostreid herpesvirus 1] gi|81986458|sp|Q6R7K3|RIR2_OSHVF RecName: Full=Ribonucleoside-diphosphate reductase small chain gi|41352405|gb|AAS00912.1| ORF20 [Ostreid herpesvirus 1] Length = 579 Score = 76.2 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 58/122 (47%), Gaps = 13/122 (10%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE+LH F +++ + + ++ +L EAT +E+ +A +P+G + Sbjct: 256 RDETLHFRFYAELLRL-------MPDRPSDERIAELLTEATEIELEFAEYVVPEGVKYIT 308 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-----NPFPWMSEVIDLKKEKNFFETRVTEY 116 Q+++ N+ C + + P++ + +P +M+ + +K NFFE + TEY Sbjct: 309 KDRLIQHVKANTNQVCEMLDINPIYFDQKGNVLLSPLLYMNTLESEQKI-NFFEGKATEY 367 Query: 117 QQ 118 Sbjct: 368 NT 369 >gi|300776394|ref|ZP_07086252.1| ribonucleoside-diphosphate reductase [Chryseobacterium gleum ATCC 35910] gi|300501904|gb|EFK33044.1| ribonucleoside-diphosphate reductase [Chryseobacterium gleum ATCC 35910] Length = 371 Score = 75.5 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 4/120 (3%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGLN 61 DE +H N GI +IN+I+ E P L T + T++ E+ E G ++ Sbjct: 241 DEQIHANAGIYLINKIREEQPDLLTDSDIEDIYTLVDESIAREGDILSWIFELGEIDNVS 300 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +M++ + +I ++ + T P W E + +FF R +Y + Sbjct: 301 KEDLLNFMKYRVDDSLKKINMKTRYNITPEQYRPMVWFEEEVFANSLDDFFAKRPVDYTK 360 >gi|88801652|ref|ZP_01117180.1| ribonucleoside-diphosphate reductase, beta subunit [Polaribacter irgensii 23-P] gi|88782310|gb|EAR13487.1| ribonucleoside-diphosphate reductase, beta subunit [Polaribacter irgensii 23-P] Length = 424 Score = 75.5 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 4/119 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62 E +H +FGID+I IK ENP + ++ + M EA + E KG + L Sbjct: 295 EQIHGDFGIDIIKIIKEENPDWFDEDHSLMVQEMCEEAFISESKIIDWIFEKGELDFLPK 354 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQQ 118 +++++ N+ IG+ +F+ W + I K +FF R Y + Sbjct: 355 NVIKEFIKNRFNKSLGSIGIAKIFEIDATLLAQTDWFDDEIIGTKHGDFFVKRSINYSK 413 >gi|313206313|ref|YP_004045490.1| ribonucleotide reductase [Riemerella anatipestifer DSM 15868] gi|312445629|gb|ADQ81984.1| ribonucleotide reductase [Riemerella anatipestifer DSM 15868] gi|315023179|gb|EFT36190.1| ribonucleotide reductase [Riemerella anatipestifer RA-YM] gi|325336242|gb|ADZ12516.1| ribonucleoside-diphosphate reductase beta chain [Riemerella anatipestifer RA-GD] Length = 324 Score = 75.5 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 4/120 (3%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LN 61 DE +H N GI +IN+IK E P L +E + ++ + LE G + L+ Sbjct: 194 DEQIHANAGIYIINKIKEEQPELLQEEDIEAIYNIVKTSVELEAEILDWIFEMGDLDHLS 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +M++ + +IG+ +F TE P W E + +FF R +Y + Sbjct: 254 KKQLLSFMKYRIDDSLKRIGMASMFNITEEEYKPMVWFEEEVFANSLDDFFAKRPVDYTK 313 >gi|312262463|gb|ADQ52758.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage PX29] Length = 376 Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 45/108 (41%), Gaps = 8/108 (7%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56 RDE LHL +I + ++ + + + K+ ++ E E +A + + Sbjct: 234 RDEQLHLKGTQYLIRAWQNGDDDSEMVDIARRLESKAVSIFIEVAEQEKEWAKDLLGNVS 293 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVID 101 GL+ Y+ ++ R +GL + ++P PW+ + ++ Sbjct: 294 IPGLSLAEMIDYIDYLTGSRMRSVGLPVPDEVNVPIKHPLPWIRKWLN 341 >gi|18466786|ref|NP_569593.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16506102|emb|CAD09988.1| putative ribonucleoside-diphosphate reductase beta subunit [Salmonella enterica subsp. enterica serovar Typhi str. CT18] Length = 380 Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 6/105 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTK----EFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LH +I ++ L K E + + + E+ +A G Sbjct: 239 RDEALHCEGTERMIRFMRTGREGLMWKMIAAEEESFIYQTMMDVAGQEMRWADYLFKDGS 298 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVI 100 +GLNA + Y+++ N ++GL LF + ++P WM++ + Sbjct: 299 MIGLNADILKSYVKYRTNLAMRRLGLRQLFPEIKDDPLVWMNKWL 343 >gi|83814991|ref|YP_444284.1| ribonucleoside-diphosphate reductase, beta subunit [Salinibacter ruber DSM 13855] gi|83756385|gb|ABC44498.1| ribonucleoside-diphosphate reductase, beta subunit [Salinibacter ruber DSM 13855] Length = 324 Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 4/119 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62 E +H FG++++N I+ E+P + F+Q+ R EA E G + L Sbjct: 195 EQIHGLFGVELMNIIREEHPEWFGPAFEQEVRAACEEAYDAEQKVLDWIFADGELDFLPR 254 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQQ 118 P + +++ N + ++P+F+ W E + L K +FF R T Y + Sbjct: 255 PVVDAFLRDKFNESLKNVDVDPIFEVDPEHLGETRWFYEEVLLTKGNDFFSKRSTSYSK 313 >gi|261496013|ref|ZP_05992423.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308263|gb|EEY09556.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia haemolytica serotype A2 str. OVINE] Length = 325 Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 4/119 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62 E +H FGI + ++ E+ L+T EF + +T+ ++A E +G + + Sbjct: 196 EEIHGKFGIALYEILRDEHSELFTPEFFEDLQTLANQAFEAERGILDWIFEEGDLSFITK 255 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQ 118 + E Y++ N +GLEP W I KE +FF R T+Y + Sbjct: 256 ATVENYIKNRYNNSLSILGLEPPHDIDPEFLKETEWFDIEILSTKETDFFNKRSTDYSK 314 >gi|82503214|ref|YP_401656.1| BaRF1 [Human herpesvirus 4] gi|139424488|ref|YP_001129453.1| BaRF1 [Human herpesvirus 4 type 2] gi|238055355|sp|P0CAP6|RIR2_EBVB9 RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase 38 kDa subunit; AltName: Full=Ribonucleotide reductase small subunit gi|238055356|sp|P0CAP7|RIR2_EBVA8 RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase 38 kDa subunit; AltName: Full=Ribonucleotide reductase small subunit gi|238055357|sp|P0C701|RIR2_EBVG RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase 38 kDa subunit; AltName: Full=Ribonucleotide reductase small subunit gi|1334857|emb|CAA24843.1| unnamed protein product [Human herpesvirus 4] gi|23893602|emb|CAD53406.1| ribonucleoside-diphosphate reductase small chain [Human herpesvirus 4] gi|64173256|gb|AAY41106.1| unknown [Human herpesvirus 4] gi|82703964|gb|ABB89233.1| BaRF1 [Human herpesvirus 4] Length = 302 Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 12/120 (10%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH + N + + + + + A +E A+ E +G ++ Sbjct: 186 RDELLHTRAASLLYNSMTAK----ADRPRATWIQELFRTAVEVETAFI-EARGEGVTLVD 240 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 + +Q+++ A+R IG PL+ + P +M+ + K+ NFFE ++Y Sbjct: 241 VRAIKQFLEATADRILGDIGQAPLYGTPPPKDCPLTYMTSI----KQTNFFEQESSDYTM 296 >gi|24943146|ref|NP_733908.1| ORF54 [Callitrichine herpesvirus 3] gi|13676697|gb|AAK38263.1|AF319782_57 ORF54 [callitrichine herpesvirus 3] Length = 302 Score = 73.9 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 43/119 (36%), Gaps = 10/119 (8%) Query: 2 RDESLHLNFGIDVINQI--KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59 RDE LH + N + K E P + + A +E + E +G Sbjct: 186 RDELLHTTAATLLYNSMTSKSERPQ------SEWIEALFRRAVDVEYNFI-EARGRGVTN 238 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 ++ +++ A+R +G+ ++ P + K NFFE +EY Sbjct: 239 IDLKGIRDFLEATADRILGDLGMTAIYDTRPPP-DCPLTYMTSVKHTNFFEQENSEYTM 296 >gi|32709437|gb|AAP86737.1| NrdB [Enterobacteria phage TuIa] Length = 391 Score = 73.5 bits (180), Expect = 8e-12, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 7/107 (6%) Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 57 RDE LHL +I Q++ + KE +Q++ + E E +A G Sbjct: 248 RDEQLHLKGTQYIIRQLQSGTDGDEWVQIAKECEQEAVDIFMEVNSQEKEWAAHLFKDGT 307 Query: 58 -VGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101 G+N S ++ ++ R Q GL P+ T++P+PW+ E ++ Sbjct: 308 CPGINTQSMCAFVDYLTVSRMKQCGLPCPITDAPTKHPYPWIREYLN 354 >gi|213962351|ref|ZP_03390614.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga sputigena Capno] gi|213955017|gb|EEB66336.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga sputigena Capno] Length = 319 Score = 73.5 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 5/120 (4%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL-N 61 DE LH N GI ++ +I E P + T + ++ + LLE +G + + Sbjct: 190 DEQLHANAGIYILKKIFEERPEMKTIA-EHEATNFIRNYILLEDKMLDWIFEQGELEFFS 248 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 YM++ + Q+GL+ F + P W E + + +FF R T Y + Sbjct: 249 KKDLANYMRYRLDDSLTQLGLDKPFNISGDEAKPMMWFEEEVFSNELDDFFAKRPTAYTK 308 >gi|332878859|ref|ZP_08446574.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683210|gb|EGJ56092.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 319 Score = 73.5 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 5/120 (4%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL-N 61 DE LH N GI ++ +I E P + K + + + +LE +G + Sbjct: 190 DEQLHANAGIYILKKIFEERPEMKAKA-EADATDFIRNYIVLEDKMLDWIFEQGELDFFG 248 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 YM++ + Q+GL F + P W E + + +FF R T Y + Sbjct: 249 KKDLANYMRYRLDDSLTQLGLTKPFNISADEAKPMMWFEEEVFSNELDDFFAKRPTAYTK 308 >gi|146301802|ref|YP_001196393.1| ribonucleotide reductase [Flavobacterium johnsoniae UW101] gi|146156220|gb|ABQ07074.1| ribonucleotide reductase [Flavobacterium johnsoniae UW101] Length = 324 Score = 73.5 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 48/120 (40%), Gaps = 4/120 (3%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGLN 61 DE +H N GI +IN+I+ E P + +E R + ++ +E +G + Sbjct: 194 DEQIHANGGIYIINKIREEFPDYFDEETLALVRETVKDSIAVESDILDWIFEEGEIESIK 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQ 118 +M+F + QI + +F + W E + +FF R EY + Sbjct: 254 KGDLVNFMKFRIDESLKQINIPVIFDVKVEDYKALAWFEEEVFANSLDDFFAKRPVEYTK 313 >gi|302321458|gb|ADL16651.1| RNR2 [Abalone herpesvirus Victoria/AUS/2007] Length = 642 Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 15/124 (12%) Query: 1 MR-DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59 +R DE+LH +F + N + + +K + ++ +A +EIA+A + + Sbjct: 246 VRNDETLHGSFYAALHN-------IMPDRASPEKVKEIIVKAVEIEIAFAMSIVTEDLEH 298 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKY------TENPFPWMSEVIDLKKEKNFFETRV 113 +N S + +++ AN C +G+EP++ +P +M+ L+K NFFE R Sbjct: 299 INPSSMQLHIKATANLCCEFLGVEPIYFDRWTKLPVVSPLSYMNNYETLQKF-NFFEVRN 357 Query: 114 TEYQ 117 +Y Sbjct: 358 MDYS 361 >gi|228861159|ref|YP_002854182.1| ribonucleotide reductase B subunit [Enterobacteria phage RB51] gi|227438833|gb|ACP31145.1| ribonucleotide reductase B subunit [Enterobacteria phage RB51] Length = 392 Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 7/107 (6%) Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE LHL +I Q+++ + KE +Q++ + E E +A G Sbjct: 249 RDEQLHLKGTQYIIRQLQLGTDGDEWVKIAKECEQEAVDIFMEVNRQEKDWAVHLFKDGD 308 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101 GLN S ++ ++ R Q GL P+ ++P+PW+ E ++ Sbjct: 309 VPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 355 >gi|32709431|gb|AAP86734.1| NrdB [Enterobacteria phage T2H] Length = 392 Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 7/107 (6%) Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE LHL +I Q+++ + KE +Q++ + E E +A G Sbjct: 249 RDEQLHLKGTQYIIRQLQLGTDGDEWVKIAKECEQEAVDIFMEVNRQEKDWAVHLFKDGD 308 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101 GLN S ++ ++ R Q GL P+ ++P+PW+ E ++ Sbjct: 309 VPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 355 >gi|330858746|ref|YP_004415121.1| putative ribonucleotide reductase B subunit [Shigella phage Shfl2] gi|327397680|gb|AEA73182.1| putative ribonucleotide reductase B subunit [Shigella phage Shfl2] Length = 389 Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 7/107 (6%) Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE LHL +I Q+++ + +E +Q++ + E E +A G Sbjct: 246 RDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQEKDWAVHLFKDGD 305 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101 GLN S ++ ++ R Q GL P+ ++P+PW+ E ++ Sbjct: 306 VPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 352 >gi|149408186|ref|YP_001294620.1| hypothetical protein ORF027 [Pseudomonas phage PA11] Length = 322 Score = 72.8 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 48/130 (36%), Gaps = 9/130 (6%) Query: 1 MRDESLHLNFGIDVINQIKIE---NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 +RDE+LH G + N +K E + H E KG Sbjct: 191 VRDENLHCEGGAWLYNTLKQEIKSEGGYINPNLEYDLANCAHTIAEHEFRIVDMIFEKGE 250 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-PFPWMSEVIDLKKEKNFFETRVTE 115 G+ A + +++ N Q+G+EP+F+ + N W + I+ +FF Sbjct: 251 MEGITAEQMKTFVKSRVNICLAQLGIEPVFEVSNNIVAEWFYDGINGVMFHDFFSGIGNS 310 Query: 116 YQQGAELKWD 125 Y + WD Sbjct: 311 YNRS----WD 316 >gi|38639969|ref|NP_943924.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage Aeh1] gi|33414658|gb|AAQ17701.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage Aeh1] Length = 376 Score = 72.8 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 45/108 (41%), Gaps = 8/108 (7%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56 RDE LHL +I + ++ ++ K + K+ + E E +A + + Sbjct: 234 RDEQLHLKGTQYLIRAWQNAEDDSEMYEIAKRLEHKAVQIFLEVAEQEKEWARDLLGNVT 293 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVID 101 GL+ S Y+ ++ R GL + ++P PW+ + ++ Sbjct: 294 IPGLSLSSMLDYIDYLTVSRMRSAGLPAPEELNIGMKHPLPWIRKWLN 341 >gi|326804582|ref|YP_004327453.1| Ribonucleotide-diphosphate reductase beta subunit [Salmonella phage Vi01] gi|301795232|emb|CBW37950.1| Ribonucleotide-diphosphate reductase beta subunit [Salmonella phage Vi01] Length = 367 Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 8/106 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPH--LWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FV 58 RDE HL +N++ + +P + +E + + M + E +A+ G + Sbjct: 232 RDEQDHLILTQTFLNRLPLLDPDFGIIREELRGEMTQMYVDVVNQEKEWANYLFKDGSML 291 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVID 101 GLNA Q + ++A R IG + +NP PW++E +D Sbjct: 292 GLNANILHQMVDWLATHRMGAIGHP--YPGQARKDNPVPWINEWLD 335 >gi|299779174|ref|YP_003734368.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage IME08] gi|298105903|gb|ADI55547.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage IME08] Length = 389 Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 7/107 (6%) Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 57 RDE LHL +I Q+++ + +E +Q++ + E E +A G Sbjct: 246 RDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQEKEWATHLFKDGT 305 Query: 58 -VGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101 GLN + ++ ++ R Q GL P+ T +P+PW+ E ++ Sbjct: 306 CPGLNTQNMGAFVDYLTVSRMKQCGLPCPITDAPTRHPYPWIREYLN 352 >gi|116326446|ref|YP_803166.1| ribonucleotide reductase B subunit [Enterobacteria phage RB32] gi|32709425|gb|AAP86731.1| NrdB [Enterobacteria phage RB32] gi|115344039|gb|ABI95048.1| ribonucleotide reductase B subunit [Enterobacteria phage RB32] Length = 392 Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 7/107 (6%) Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE LHL +I Q++ + +E +Q++ + E E +A G Sbjct: 249 RDEQLHLKGTQYIIRQLQSGTDGDEWVKIAQECEQEAVDIFMEVNRQEKDWAVHLFKDGD 308 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101 GLN S ++ ++ R Q GL P+ ++P+PW+ E ++ Sbjct: 309 VPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 355 >gi|9632793|ref|NP_049841.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage T4] gi|1172940|sp|P11156|RIR2_BPT4 RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Protein B2; AltName: Full=Ribonucleotide reductase gi|5354417|gb|AAD42624.1|AF158101_211 NrdB aerobic NDP reductase, small subunit [Enterobacteria phage T4] gi|15342|emb|CAA27757.1| small subunit B2 [Enterobacteria phage T4] gi|299780589|gb|ADJ39951.1| aerobic NDP reductase small subunit [Enterobacteria phage T4T] Length = 388 Score = 72.0 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 7/107 (6%) Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE LHL +I Q++ + +E +Q++ + E E +A G Sbjct: 245 RDEQLHLKGTQYIIRQLQSGTDGDEWVKIAQECEQEAVDIFMEVNRQEKDWAVHLFKDGD 304 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101 GLN S ++ ++ R Q GL P+ ++P+PW+ E ++ Sbjct: 305 VPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 351 >gi|145637995|ref|ZP_01793631.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae PittHH] gi|145268805|gb|EDK08772.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus influenzae PittHH] Length = 115 Score = 72.0 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 5/77 (6%) Query: 2 RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LHL ++N + ++P + +E +Q++ + A E A+A G Sbjct: 13 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGS 72 Query: 57 FVGLNAPSCEQYMQFIA 73 +GLN QY+++I Sbjct: 73 MIGLNRDILVQYVEYIT 89 >gi|32709433|gb|AAP86735.1| NrdB [Enterobacteria phage U5] Length = 391 Score = 72.0 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 7/107 (6%) Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE LHL +I Q++ + +E +Q++ + E E +A G Sbjct: 248 RDEQLHLKGTQYIIRQLQSGTDGDEWVKIAQECEQEAVDIFMEVNRQEKDWAVHLFKDGD 307 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101 GLN S ++ ++ R Q GL P+ ++P+PW+ E ++ Sbjct: 308 VPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 354 >gi|161622513|ref|YP_001595352.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage JS98] gi|160213819|gb|ABX11158.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage JS98] Length = 379 Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 7/107 (6%) Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 57 RDE LHL +I Q+++ + +E +Q++ + E E +A G Sbjct: 236 RDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQEKEWAAHLFKDGT 295 Query: 58 -VGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101 GLN + ++ ++ R Q GL P+ T +P+PW+ E ++ Sbjct: 296 CPGLNTQNMGAFVDYLTVSRMKQCGLPCPITDAPTRHPYPWIREYLN 342 >gi|67906414|gb|AAY82584.1| ribonucleotide reductase subunit 2 [Carassius carassius] Length = 246 Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 7/59 (11%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 RDE LH +F + HL K ++ + ++ A +E + + +P +G+ Sbjct: 195 RDEGLHCDFACLMFK-------HLVNKPSEETVKKIIVNAVAIEQEFLTDALPVKLIGM 246 >gi|291290450|dbj|BAI83245.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage AR1] Length = 392 Score = 71.6 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 7/107 (6%) Query: 2 RDESLHLNFGIDVINQIKIENP-HLWTK---EFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE LHL +I Q++ W K E +Q++ + E E +A G Sbjct: 249 RDEQLHLKGTQYIIRQLQSGTDGDQWVKIAQECEQEAVDIFMEVNRQEKDWAVHLFKDGD 308 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101 GLN S ++ ++ R Q GL P+ ++P+PW+ E ++ Sbjct: 309 VPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 355 >gi|228861541|ref|YP_002854562.1| ribonucleotide reductase B subunit [Enterobacteria phage RB14] gi|227438557|gb|ACP30870.1| ribonucleotide reductase B subunit [Enterobacteria phage RB14] Length = 392 Score = 71.6 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 7/107 (6%) Query: 2 RDESLHLNFGIDVINQIKIENP-HLWTK---EFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE LHL +I Q++ W K E +Q++ + E E +A G Sbjct: 249 RDEQLHLKGTQYIIRQLQSGTDGDQWVKIAQECEQEAVDIFMEVNRQEKDWAVHLFKDGD 308 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101 GLN S ++ ++ R Q GL P+ ++P+PW+ E ++ Sbjct: 309 VPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 355 >gi|32709423|gb|AAP86730.1| NrdB [Enterobacteria phage RB27] Length = 392 Score = 71.6 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 7/107 (6%) Query: 2 RDESLHLNFGIDVINQIKIENP-HLWTK---EFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE LHL +I Q++ W K E +Q++ + E E +A G Sbjct: 249 RDEQLHLKGTQYIIRQLQSGTDGDQWVKIAQECEQEAVDIFMEVNRQEKDWAVHLFKDGD 308 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101 GLN S ++ ++ R Q GL P+ ++P+PW+ E ++ Sbjct: 309 VPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 355 >gi|238695377|ref|YP_002922570.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage JS10] gi|220029513|gb|ACL78447.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage JS10] Length = 379 Score = 71.2 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 7/107 (6%) Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 57 RDE LHL +I Q+++ + +E +Q++ + E E +A G Sbjct: 236 RDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQEKEWAGHLFKDGT 295 Query: 58 -VGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101 GLN + ++ ++ R Q GL P+ T +P+PW+ E ++ Sbjct: 296 CPGLNTQNMGAFVDYLTVSRMKQCGLPCPITDAPTRHPYPWIREYLN 342 >gi|310722637|ref|YP_003969460.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage phiAS5] gi|306021480|gb|ADM80014.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage phiAS5] Length = 376 Score = 71.2 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 46/110 (41%), Gaps = 8/110 (7%) Query: 2 RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETM-PKG 56 RDE LHL I + ++P + K + K+ + +A E +A + + Sbjct: 234 RDEQLHLKGTQYQIRTWQNGEDDPEMVDIAKRLESKAVQIFLDAAEQEKEWARDLLSRVS 293 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLK 103 L+ S Y+ ++ R GL + +++P PW+ + ++ + Sbjct: 294 IPSLSLQSMLDYIDYLTASRMQSAGLPIPEELNVPSKHPLPWIRKWLNSE 343 >gi|18653874|ref|NP_570808.1| small ribonucleotide reductase [Macacine herpesvirus 5] gi|4494972|gb|AAD21394.1| small ribonucleotide reductase [Macaca mulatta rhadinovirus 17577] Length = 314 Score = 71.2 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 41/119 (34%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH + N + + + EA +E + + +N Sbjct: 199 RDELLHTRAASLLYNTMISRDES----PSVAYIHGLFREAVEIETLFIRSK-SRDVTMVN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 EQ++Q A+R I + PLF N P K NFFE +EY Sbjct: 254 VGDIEQFLQATADRILKSINIPPLFGARPPNACP--LSYTSAKSV-NFFERDNSEYVTS 309 >gi|46519447|gb|AAT00095.1| JM118 [Macaca fuscata rhadinovirus] Length = 314 Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 42/119 (35%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH + N + + + EA +E + +G +N Sbjct: 199 RDELLHTRAAGLLYNTMISRDES----PSVAYIHGLFREAVEIETLFIRSK-SRGVTMVN 253 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 EQ++Q A+R I + PLF N P K NFFE +EY Sbjct: 254 VGDIEQFLQATADRILKSINVPPLFGARPPNACP--LSYTSAKSV-NFFERDNSEYVTS 309 >gi|7330057|gb|AAF60046.1|AF210726_67 small ribonuclease reductase [Rhesus monkey rhadinovirus H26-95] Length = 304 Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 41/119 (34%), Gaps = 9/119 (7%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH + N + + + EA +E + + +N Sbjct: 189 RDELLHTRAASLLYNTMISRDES----PSVAYIHGLFREAVEIETLFIRSK-SRDVTMVN 243 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 EQ++Q A+R I + PLF N P K NFFE +EY Sbjct: 244 VGDIEQFLQATADRILKSINIPPLFGARPPNACP--LSYTSAKSV-NFFERDNSEYVTS 299 >gi|37651592|ref|NP_932466.1| hypothetical protein 44RRORF111c [Aeromonas phage 44RR2.8t] gi|66391913|ref|YP_238838.1| hypothetical protein PHG31p109 [Aeromonas phage 31] gi|34732892|gb|AAQ81430.1| hypothetical protein 44RRORF111c [Aeromonas phage 44RR2.8t] gi|62114750|gb|AAX63598.1| hypothetical protein PHG31p109 [Aeromonas phage 31] Length = 323 Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 46/128 (35%), Gaps = 9/128 (7%) Query: 3 DESLHLNFGIDVINQIKIE--NPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58 DE H G + + E H ++ + M H+ E + Sbjct: 192 DEHHHSIGGAMLFRTLCREMMEHHKVDVREKLKDDIIAMAHQVYDHESGIIDLVFAEPID 251 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKNFFETRVTEYQ 117 G+ A +++ N +G +P+F+ NP W I+ KK +FF +EY Sbjct: 252 GITADELRIFVKSRINLCLENLGYDPIFEIESNPIASWFYRTINAKKFHDFFTGSGSEYN 311 Query: 118 QGAELKWD 125 + WD Sbjct: 312 ----INWD 315 >gi|30348565|emb|CAC84357.1| RRsmall [Saimiriine herpesvirus 2] Length = 305 Score = 70.4 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 45/127 (35%), Gaps = 14/127 (11%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH + + N + + + + EA +E + G +N Sbjct: 189 RDEMLHTSAAALLYNTMTK----SSERPSEDWIYKLFREAVEVEFKFIA-AKGHGVSLVN 243 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY--TEN-PFPWMSEVIDLKKEKNFFETRVTEYQQ 118 Q++Q A+R I L P++ EN P K NFFE ++Y Sbjct: 244 VHEIRQFLQATADRILESINLNPIYGSLPPENCPL----AYTSSTKSVNFFERDNSDYT- 298 Query: 119 GAELKWD 125 L D Sbjct: 299 -GTLTND 304 >gi|261599112|ref|YP_003257364.1| ribonucleotide-diphosphate reductase beta subunit [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497769|gb|ACX84218.1| ribonucleotide-diphosphate reductase beta subunit [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 357 Score = 70.1 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 50/129 (38%), Gaps = 8/129 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVG 59 +RDESLH G + EN L + ++ + A E + + + Sbjct: 192 VRDESLHSEAGCKIFRTFCEENKGLK-EIVERSVYHGVDLALKNEFVFIDKIFGGRDLCT 250 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYT----ENPFPWMSEVIDLKKEKNFFETRVTE 115 + + +M+ AN + ++G + +N W I +++ +FF+ R T Sbjct: 251 IKREELKNFMKDRANMKLRELGFFDSYHVDRRMLDN-MNWFYITISGEQQTDFFDNRETG 309 Query: 116 YQQGAELKW 124 Y + E W Sbjct: 310 YSKPNE-DW 317 >gi|258544274|ref|ZP_05704508.1| ribonucleoside-diphosphate reductase, beta subunit [Cardiobacterium hominis ATCC 15826] gi|258520512|gb|EEV89371.1| ribonucleoside-diphosphate reductase, beta subunit [Cardiobacterium hominis ATCC 15826] Length = 325 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 47/119 (39%), Gaps = 4/119 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62 E +H FGI + I+ E+P L+T +F + + + + A E G + + Sbjct: 196 EEIHGRFGIALYGIIRDEHPRLFTPDFYDELQQLANHALEAERGILRWIFEDGDLDFITL 255 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQQ 118 + E Y+ N +G+ + W I KE +FF R T+Y + Sbjct: 256 DTVENYITNRYNNSLEILGINAPYLVDTKKLRETEWFDIEILSGKEGDFFYKRSTDYSK 314 >gi|148688624|gb|EDL20571.1| mCG140327 [Mus musculus] Length = 65 Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%) Query: 70 QFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAELK 123 +F+A+ ++G +F+ ENPF +M E I L+ + NFFE RV EYQ+ + Sbjct: 1 EFVADMLMLELGFNKIFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGVMS 52 >gi|9626016|ref|NP_040262.1| ribonucleotide reductase, small subunit [Saimiriine herpesvirus 2] gi|266917|sp|Q01038|RIR2_SHV21 RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|66391|pir||WMBEP5 ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain - saimiriine herpesvirus 1 (strain 11) gi|60381|emb|CAA45683.1| ribonucleotide reductase, small subunit [Saimiriine herpesvirus 2] gi|330989|gb|AAA46136.1| ribonucleotide reductase small subunit [Saimiriine herpesvirus 2] Length = 305 Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 45/127 (35%), Gaps = 14/127 (11%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH + + N + + + + EA +E + G +N Sbjct: 189 RDEMLHTSAAALLYNTMTK----SSERPSEDWIYKLFREAVEVEFKFIA-AKGYGVSLVN 243 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY--TEN-PFPWMSEVIDLKKEKNFFETRVTEYQQ 118 Q++Q A+R I L P++ EN P K NFFE ++Y Sbjct: 244 VHEIRQFLQATADRILESINLNPIYGSLPPENCPL----AYTSSTKSVNFFERDNSDYT- 298 Query: 119 GAELKWD 125 L D Sbjct: 299 -GTLTND 304 >gi|290992332|ref|XP_002678788.1| predicted protein [Naegleria gruberi] gi|284092402|gb|EFC46044.1| predicted protein [Naegleria gruberi] Length = 330 Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 10/108 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE H NF + + +K +K Q +++ EA +E + ++P + L+ Sbjct: 206 RDEEFHSNFLYSLYSNLK------HSKLPQTLVHSLVKEAVDIEKEFIT-SLPTELIELD 258 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 109 S QY++ +++ G E LF +TEN W+ ++ L + FF Sbjct: 259 RNSMYQYVEVVSDNILISFGYEKLF-HTENQCSWIQDM--LMNKSGFF 303 >gi|326800312|ref|YP_004318131.1| ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21] gi|326551076|gb|ADZ79461.1| Ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21] Length = 327 Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 60/127 (47%), Gaps = 17/127 (13%) Query: 3 DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58 DES+H F D+ ++ + +E ++K +L E+ Y E V Sbjct: 197 DESIHGVFVGLLAQDIFRKLSNQ------EEVKKKVVDLLMLLYENELKYTEEIYTD--V 248 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEY 116 GL A ++Y+++ AN+ +G E LF+ E NP + ++L+ + +FF + T Y Sbjct: 249 GLTAE-VKEYVRYNANKALMNLGFEELFEVKEVNPI--VLNGLNLETTQHDFFSKKSTNY 305 Query: 117 QQGAELK 123 ++ ++ Sbjct: 306 EKATQIS 312 >gi|282599256|ref|YP_003358568.1| NrdB ribonucleotide reductase subunit beta [Shigella phage phiSboM-AG3] gi|226973562|gb|ACO94315.1| NrdB ribonucleotide reductase subunit beta [Shigella phage phiSboM-AG3] Length = 367 Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 4/104 (3%) Query: 2 RDESLHLNFGIDVINQIKIENP--HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FV 58 RDE HL ++N++ +P + +E + + M + E +A G + Sbjct: 232 RDEQDHLILTQTLLNRLPGMDPDFEIIREELRGEMTQMFLDVGNQEKQWADYLFQDGSML 291 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVID 101 GLNA + ++ R IG P E P PW++E ++ Sbjct: 292 GLNAKILHHMVDWLLTHRMGAIGHPYPGEPRKECPVPWINEWLN 335 >gi|284504289|ref|YP_003407004.1| ribonucleotide reductase small chain [Marseillevirus] gi|282935727|gb|ADB04042.1| ribonucleotide reductase small chain [Marseillevirus] Length = 280 Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 3/117 (2%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DE+LH F V I ++ + + Q++ + +L A + H+ + V ++A Sbjct: 154 DEALHQRFAEAVYRYI-VDVIKAFPRVSQERVQEILGSAIDAVSPFIHDCLRFKNVNIDA 212 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 YM+ A+ +G E F +++ +M +I + + NFFE V +Y +G Sbjct: 213 ERMIGYMKNAADGLAFSLGYEKFFN-SDSSLDYML-LIGMDNKTNFFEEVVADYAKG 267 >gi|109290088|ref|YP_656337.1| hypothetical protein PHG25ORF102c [Aeromonas phage 25] gi|104345761|gb|ABF72661.1| hypothetical protein PHG25ORF102c [Aeromonas phage 25] Length = 332 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 42/120 (35%), Gaps = 5/120 (4%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFV 58 DE H G + + E + ++ + M + E + Sbjct: 201 DEHHHSIGGAMLFQTLCREMKEKYGEDVRAKLKNDIINMARQVFDHESGIIDLVFAEPID 260 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKNFFETRVTEYQ 117 G+ A +++ N +G EP+F+ NP W I+ KK +FF +EY Sbjct: 261 GITADELRVFVKSRINLCLENLGYEPIFEIENNPIADWFYRTINAKKFHDFFTGSGSEYN 320 >gi|83642896|ref|YP_438184.1| ORF60 [Ovine herpesvirus 2] gi|61971010|gb|AAX58095.1| ORF60 [Ovine herpesvirus 2] gi|78127895|gb|ABB22279.1| ribonucleotide-reductase small subunit-like protein [Ovine herpesvirus 2] Length = 305 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 43/123 (34%), Gaps = 18/123 (14%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL- 60 RDE LH + N + + K + + EA +E + G VG Sbjct: 189 RDELLHTRAAALLYNTVIPQEG----KPSEAWIIDLFKEAVSIEDEFIRA--KSGEVGFV 242 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKEKN--FFETRVTE 115 N ++++ A+R + IGL F P + KN FFE TE Sbjct: 243 NVADIRRFLEATADRLLNSIGLPVHFKSEPPKSCPLTY------TGCIKNVSFFERESTE 296 Query: 116 YQQ 118 Y Sbjct: 297 YST 299 >gi|311993225|ref|YP_004010091.1| aerobic NDP reductase, small subunit [Enterobacteria phage CC31] gi|284178063|gb|ADB81729.1| aerobic NDP reductase, small subunit [Enterobacteria phage CC31] Length = 379 Score = 68.1 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 7/107 (6%) Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56 RDE LHL +I Q+++ E +E +Q++ + E E +A G Sbjct: 236 RDEQLHLKGTQYIIRQLQLGTDGEEWVQIARECEQEAVDIFMEINRQEKEWAVHLWRDGG 295 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101 GL+ ++ ++ R GL P+ +P PW+ E ++ Sbjct: 296 VPGLSVKILHDFIDYLTVSRMRSCGLPCPITDAPVRHPIPWIREYLN 342 >gi|9631250|ref|NP_048031.1| small subunit of ribonucleotide reductase [Ateline herpesvirus 3] gi|4019286|gb|AAC95584.1| small subunit of ribonucleotide reductase [Ateline herpesvirus 3] Length = 305 Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 43/118 (36%), Gaps = 12/118 (10%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH + + N + + ++ + EA +E + + G +N Sbjct: 189 RDEMLHTSAAALLYNTMTK----PSERPPEKWIYELFREAVEVEFKFISAKV-HGVSHVN 243 Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 Q++Q A+R I L P++ P K NFFE ++Y Sbjct: 244 VHEIRQFLQATADRILESINLNPIYHSVPPANCPL----VYTSSTKSVNFFERDNSDY 297 >gi|146329200|ref|YP_001209518.1| ribonucleotide reductase, beta subunit [Dichelobacter nodosus VCS1703A] gi|146232670|gb|ABQ13648.1| ribonucleotide reductase, beta subunit [Dichelobacter nodosus VCS1703A] Length = 325 Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 4/119 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGLNA 62 E +H FGI + + IK E+P L+T F +T+ +A E + G L Sbjct: 196 EEIHGRFGIALYHIIKEEHPDLFTDSFYHHLKTLADQALAAERGILNWIFENGDLPFLQQ 255 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQ 118 + E Y+ N +G+E + E W I KE +FF R T+Y + Sbjct: 256 KTVENYIVNRYNNSLSVLGIESPYTVDEERLKETQWFDIEILSGKENDFFYKRSTDYSK 314 >gi|321496611|ref|YP_004207896.1| ribonucleotide reductase small subunit [Rodent herpesvirus Peru] gi|320332513|gb|ADW24401.1| ribonucleotide reductase small subunit [Rodent herpesvirus Peru] gi|320332596|gb|ADW24483.1| ribonucleotide reductase small subunit [Rodent herpesvirus Peru] Length = 307 Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 12/121 (9%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH + N + + K + EA +EI + E +G +N Sbjct: 191 RDELLHTRAAALLYNTLVDPDR----KPPVHWIHNLFREAVDVEIRFIRER-GRGVTAVN 245 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 +++ A+R QI L L+ + P + + V ++ NFFE T+Y Sbjct: 246 IEDIISFLKATADRMLTQIKLPILYGELAPSGCPLAFNACVKNI----NFFEREGTDYSS 301 Query: 119 G 119 Sbjct: 302 S 302 >gi|9628063|ref|NP_042657.1| ribonucleotide reductase, small subunit [Equid herpesvirus 2] gi|82013696|sp|Q66662|RIR2_EHV2 RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|695233|gb|AAC13848.1| ribonucleotide reductase, small subunit [Equid herpesvirus 2] Length = 305 Score = 67.4 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 44/119 (36%), Gaps = 8/119 (6%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE +H + N + + K + + EA +E + +G +N Sbjct: 189 RDEWVHTRAAALLFNTLVPDE----EKPSPEWIGALFREAVEVEYNFI-LAKGRGVSHVN 243 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENP-FPWMSEVIDLKKEKNFFETRVTEYQQG 119 ++++ A+R I + P++ P P + K NFFE ++Y Sbjct: 244 VADINRFLEATADRILKSINVGPVYGTQPPPNCPLV--YTGCLKNVNFFERESSDYTTA 300 >gi|227537625|ref|ZP_03967674.1| ribonucleoside-diphosphate reductase [Sphingobacterium spiritivorum ATCC 33300] gi|300771015|ref|ZP_07080892.1| ribonucleotide-diphosphate reductase subunit beta [Sphingobacterium spiritivorum ATCC 33861] gi|227242511|gb|EEI92526.1| ribonucleoside-diphosphate reductase [Sphingobacterium spiritivorum ATCC 33300] gi|300762288|gb|EFK59107.1| ribonucleotide-diphosphate reductase subunit beta [Sphingobacterium spiritivorum ATCC 33861] Length = 328 Score = 67.4 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 21/128 (16%) Query: 3 DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58 DES+H F D+ +I + +E + + T+L+E E+ Y E V Sbjct: 198 DESIHGVFVGLIAQDIFRRIPNK------EEVKARFLTLLNELYENELKYTEEIY--TVV 249 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVT 114 GL A ++Y+++ N+ +G +P+F+ + NP + L E +FF + T Sbjct: 250 GLTAE-VKEYVRYNGNKALMNLGFDPIFEVKQVNPI----VLNGLNTETTQHDFFSKKST 304 Query: 115 EYQQGAEL 122 Y++ E+ Sbjct: 305 NYEKATEI 312 >gi|310722361|ref|YP_003969185.1| hypothetical protein phiAS4_ORF0167 [Aeromonas phage phiAS4] gi|306021204|gb|ADM79739.1| hypothetical protein phiAS4_ORF0167 [Aeromonas phage phiAS4] Length = 332 Score = 67.4 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 43/120 (35%), Gaps = 5/120 (4%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFV 58 DE H G + + E + ++ + M ++ E + Sbjct: 201 DEHHHSIGGAMLFQTLCREMKEKYGEDVRAKLKNDIINMAYQVFDHESGIIDLVFAEPID 260 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKNFFETRVTEYQ 117 G+ A +++ N +G EP+F+ NP W I+ KK +FF +EY Sbjct: 261 GITADELRVFVKSRINLCLENLGYEPIFEIENNPIADWFYRTINAKKFHDFFTGSGSEYN 320 >gi|225619347|ref|YP_002720573.1| ribonucleoside-diphosphate reductase subunit beta [Brachyspira hyodysenteriae WA1] gi|225214166|gb|ACN82900.1| ribonucleoside-diphosphate reductase, beta subunit [Brachyspira hyodysenteriae WA1] Length = 356 Score = 67.4 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 10/132 (7%) Query: 3 DE-SLHLNFGIDVINQIKIENPHLWTKEFQ-----QKSRTMLHEATLLEIAYAHETM-PK 55 DE + H+ G +V+N ++ EN +T F+ + +R M EI +A Sbjct: 225 DELNTHVPTGKNVMNILRKENEQGFTHLFKSGWFNETARAMAEFTVNEEIKWAKYLFDGY 284 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKE-KNFFETRV 113 G+N+ E ++++ A R +G+E + + + W + D+ K+ ET Sbjct: 285 QVAGINSSVSEHFIKYWAGVRLRDLGVESPYNEKKSDVIDWFNSYRDINKQNAALQETTN 344 Query: 114 TEYQQGAELKWD 125 T YQ+ LK D Sbjct: 345 TSYQK-GALKND 355 >gi|311992967|ref|YP_004009834.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage Acj61] gi|295815256|gb|ADG36182.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage Acj61] Length = 377 Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 7/109 (6%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LH +I +++ E P +E ++++ + E + G Sbjct: 232 RDENLHHQGTRYMIKRLQSGEEGPEWIKIAEECREEATNIFLATNEQEKEWCKYVYQSGA 291 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLE--PLFKYTENPFPWMSEVIDLK 103 GL+ Y+ + R +++GL+ + NPFPW+++ + Sbjct: 292 PQGLSVGLVSDYIDYATVPRMNELGLDSSSIVAPKRNPFPWLTKFLKSN 340 >gi|323512793|gb|ADX88247.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage ICP1_2006_D] gi|323513021|gb|ADX88474.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage ICP1_2006_C] gi|323513246|gb|ADX88698.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage ICP1_2006_B] gi|323513473|gb|ADX88924.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage ICP1_2006_A] gi|323513704|gb|ADX89154.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage ICP1_2005_A] Length = 450 Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 50/104 (48%), Gaps = 4/104 (3%) Query: 3 DESLHLNFGIDVINQIKIENPHLWT-KEFQQKSRTMLHEATLLEIAYAHETM--PKGFVG 59 DE++H +IN + + L T ++ + + ++ E++++ + VG Sbjct: 231 DETIHTRMDEAIINILLGDEVWLKTFEDIKPDIKEIVDSVYKQELSWSEYIFSEGRSIVG 290 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDL 102 LN ++++Q+ + ++G+E F+ NP PWM +D+ Sbjct: 291 LNTSLLKEWVQYKSQVVYKKLGIEQPFEDVINNPLPWMENWLDI 334 >gi|325171172|ref|YP_004251147.1| ribonucleoside diphosphate reductase, beta chain [Vibrio phage ICP1] gi|323512567|gb|ADX88022.1| ribonucleoside diphosphate reductase, beta chain [Vibrio phage ICP1] gi|323513935|gb|ADX89384.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage ICP1_2001_A] gi|323514163|gb|ADX89611.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage ICP1_2004_A] Length = 450 Score = 65.4 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 50/104 (48%), Gaps = 4/104 (3%) Query: 3 DESLHLNFGIDVINQIKIENPHLWT-KEFQQKSRTMLHEATLLEIAYAHETM--PKGFVG 59 DE++H +IN + + L T ++ + + ++ E++++ + VG Sbjct: 231 DETIHTRMDEAIINILLGDEVWLKTFEDIKPDIKEIVDSVYKQELSWSEYIFSEGRSIVG 290 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDL 102 LN ++++Q+ + ++G+E F+ NP PWM +D+ Sbjct: 291 LNTSLLKEWVQYKSQVVYKKLGIEQPFEDVINNPLPWMENWLDI 334 >gi|213581345|ref|ZP_03363171.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 90 Score = 65.4 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 5/83 (6%) Query: 48 YAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKE 105 +A G +GLN QY+++I N R +GL+ F+ NP PW++ ++ + Sbjct: 1 WADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQ 60 Query: 106 KNFFETRVTEY---QQGAELKWD 125 E V+ Y Q +E+ D Sbjct: 61 VAPQEVEVSSYLVGQIDSEVDTD 83 >gi|260889741|ref|ZP_05901004.1| ribonucleoside-diphosphate reductase, beta subunit [Leptotrichia hofstadii F0254] gi|260860347|gb|EEX74847.1| ribonucleoside-diphosphate reductase, beta subunit [Leptotrichia hofstadii F0254] Length = 335 Score = 65.4 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 53/119 (44%), Gaps = 7/119 (5%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DES+H F + ++ + + + + ++++ E Y E +GL Sbjct: 200 DESIHGVFVGLLFQELYNSFSEEEKADMRAELKKLMYDLYENETRYTDEIYGD--LGLTG 257 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 ++Y+++ AN+ +G E F+ NP + ++++ + +FF + T Y++ Sbjct: 258 D-VKEYIRYNANKALMNLGFEEEFEVKNVNPI--VLNGLNVETTQHDFFSKKSTNYEKA 313 >gi|10140982|ref|NP_065559.1| ribonucleotide-reductase, small subunit [Alcelaphine herpesvirus 1] gi|81984051|sp|O36410|RIR2_ALHV1 RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleotide reductase small subunit gi|2338023|gb|AAC58107.1| ribonucleotide-reductase, small subunit [Alcelaphine herpesvirus 1] Length = 305 Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 43/121 (35%), Gaps = 16/121 (13%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH + N + + + + ++ EA +E A+ K ++ Sbjct: 189 RDELLHTRAAALLYNTMIPKE----ERPSSEWVVSLFKEAVEIECAFIEAKT-KQVTFVS 243 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN--FFETRVTEY 116 +++ A+R + I L +K P + KN FFE TEY Sbjct: 244 MDDIRAFLEATADRLLNSIELPRYYKSDPPQSCPLTY------TGCIKNVSFFERESTEY 297 Query: 117 Q 117 Sbjct: 298 S 298 >gi|139472853|ref|YP_001129417.1| ORF60 [Human herpesvirus 8] gi|1718316|gb|AAC57145.1| ORF 60 [Human herpesvirus 8 type M] gi|2246534|gb|AAB62659.1| ORF 60 [Human herpesvirus 8] gi|87196889|gb|ABD28915.1| ORF60 [Human herpesvirus 8] gi|261853541|gb|ACY00463.1| ORF60 [Human herpesvirus 8] gi|312275208|gb|ADQ57945.1| core gene UL40 family protein [Human herpesvirus 8] Length = 305 Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 12/120 (10%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH + N + + K + + + EA +EI + G +N Sbjct: 189 RDELLHTKAASMLYNTMV----EIQEKPSHAEVQALFREAVNIEIRFIQ-AKAAGVTLVN 243 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 ++++ A+R I + P+F P + K NFFE ++Y Sbjct: 244 VVDIRRFLEATADRILRDIFVPPIFGTPPPEACPLSYTGSF----KAVNFFERDNSDYTT 299 >gi|297622357|ref|YP_003703791.1| ribonucleotide reductase [Truepera radiovictrix DSM 17093] gi|297163537|gb|ADI13248.1| ribonucleotide reductase [Truepera radiovictrix DSM 17093] Length = 324 Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 45/119 (37%), Gaps = 4/119 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGLNA 62 E +H FG ++ ++ E P + F + R +A E A G L Sbjct: 193 EQIHGMFGYKLVETLRRERPEWFGAAFSARLRAACVDAERAERAILRWICEAGALPFLPL 252 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQQ 118 E +MQ N +G PL++ P W E + K+ +FF R T Y + Sbjct: 253 AQLEAFMQARFNGALVALGEAPLWEVDPALLAPTRWFEEELLSSKQVDFFHKRPTAYAK 311 >gi|149392653|gb|ABR26129.1| ribonucleoside-diphosphate reductase small chain [Oryza sativa Indica Group] Length = 233 Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 27/58 (46%), Gaps = 7/58 (12%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59 RDE LH +F + + ++ K + + + ++ +A +E + + +P VG Sbjct: 183 RDEGLHCDFACLLYDLLRG-------KLDESRVQEIVADAVDIEREFVCDALPVALVG 233 >gi|257125877|ref|YP_003163991.1| ribonucleoside-diphosphate reductase [Leptotrichia buccalis C-1013-b] gi|257049816|gb|ACV39000.1| Ribonucleoside-diphosphate reductase [Leptotrichia buccalis C-1013-b] Length = 335 Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 54/119 (45%), Gaps = 7/119 (5%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DES+H F + ++ + + + + ++++ E Y E +GL Sbjct: 199 DESIHGVFVGLLFQELYNSFSEEEKADMRAELKKLMYDLYENETRYTDEIYGD--LGLT- 255 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 + ++Y+++ AN+ +G E F+ NP + ++++ + +FF + T Y++ Sbjct: 256 GNVKEYIRYNANKALMNLGFEEEFEVKNVNPI--VLNGLNVETTQHDFFSKKSTNYEKA 312 >gi|262038309|ref|ZP_06011695.1| ribonucleoside-diphosphate reductase, beta subunit [Leptotrichia goodfellowii F0264] gi|261747660|gb|EEY35113.1| ribonucleoside-diphosphate reductase, beta subunit [Leptotrichia goodfellowii F0264] Length = 334 Score = 63.9 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 56/119 (47%), Gaps = 7/119 (5%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DES+H F + +I + +++ + ++H+ E Y E VGL A Sbjct: 199 DESIHGVFVGLLSQEIYATFSEEEKESVRKELKELMHDLYENEARYTDEVYGD--VGLTA 256 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119 ++Y+++ AN+ +G E F+ + NP + ++++ + +FF + T Y++ Sbjct: 257 D-VKEYIRYNANKALMNLGFEEEFEVKDVNPI--VLNGLNVETTQHDFFSKKSTNYEKA 312 >gi|255656920|ref|ZP_05402329.1| ribonucleoside-diphosphate reductase beta chain [Clostridium difficile QCD-23m63] gi|296452239|ref|ZP_06893946.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium difficile NAP08] gi|296877591|ref|ZP_06901622.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium difficile NAP07] gi|296258926|gb|EFH05814.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium difficile NAP08] gi|296431442|gb|EFH17258.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium difficile NAP07] Length = 323 Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 7/121 (5%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH + + +I + + ++K ++L+ EI Y + + + Sbjct: 196 LRDESLHGKYIGLLAQEIYDSFDKMDKEILEEKMYSILYRLMENEIEYTNIIYRESGL-- 253 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118 ++++ ANR +G E L+ NP + + + + +FF T+ YQ+ Sbjct: 254 -EKEVVNFLKYNANRALENLGFEKLYTVDAINPI--VLNGLSTETKTHDFFSTKGNGYQK 310 Query: 119 G 119 G Sbjct: 311 G 311 >gi|254976540|ref|ZP_05273012.1| ribonucleoside-diphosphate reductase beta chain [Clostridium difficile QCD-66c26] gi|255093925|ref|ZP_05323403.1| ribonucleoside-diphosphate reductase beta chain [Clostridium difficile CIP 107932] gi|255315677|ref|ZP_05357260.1| ribonucleoside-diphosphate reductase beta chain [Clostridium difficile QCD-76w55] gi|255518338|ref|ZP_05386014.1| ribonucleoside-diphosphate reductase beta chain [Clostridium difficile QCD-97b34] gi|255651455|ref|ZP_05398357.1| ribonucleoside-diphosphate reductase beta chain [Clostridium difficile QCD-37x79] gi|260684515|ref|YP_003215800.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium difficile CD196] gi|260688173|ref|YP_003219307.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium difficile R20291] gi|260210678|emb|CBA65434.1| ribonucleoside-diphosphate reductase beta chain [Clostridium difficile CD196] gi|260214190|emb|CBE06438.1| ribonucleoside-diphosphate reductase beta chain [Clostridium difficile R20291] Length = 323 Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 7/121 (5%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH + + +I + K ++K ++L+ EI Y + + + Sbjct: 196 LRDESLHGKYIGLLAQEIYDSFDKMDKKMLEEKMYSILYSLMENEIEYTNVIYRESGL-- 253 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118 ++++ ANR +G E L+ NP + + + + +FF T+ YQ+ Sbjct: 254 -EKEVVNFLKYNANRALENLGFEKLYTVDAINPI--VLNGLSTETKTHDFFSTKGNGYQK 310 Query: 119 G 119 G Sbjct: 311 G 311 >gi|47213107|emb|CAF89527.1| unnamed protein product [Tetraodon nigroviridis] Length = 369 Score = 62.7 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Query: 89 TENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122 ENPF +M E I L+ + NFFE RV EYQ+ + Sbjct: 323 AENPFDFM-ENISLEGKTNFFEKRVGEYQRMGVM 355 >gi|314121808|ref|YP_004063927.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage vB_EcoM-VR7] gi|313151565|gb|ADR32621.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage vB_EcoM-VR7] Length = 392 Score = 62.7 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 7/107 (6%) Query: 2 RDESLHLNFGIDVINQIKIE-NPHLWTK---EFQQKSRTMLHEATLLEIAYAHETMPK-G 56 RDE LHL ++ Q++ + W K E + ++ + E E +A G Sbjct: 249 RDEQLHLKGTQYILRQLQTGVDGDEWVKIAHECEAEAAAIFMEVNRQEKEWAVHLFKDGG 308 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGL--EPLFKYTENPFPWMSEVID 101 GL+ +++ ++ R Q GL E + + T++P PW+ E ++ Sbjct: 309 LPGLSVEILNRFIDYLTVSRMKQCGLPCEIVLESTKHPIPWIREYLN 355 >gi|308814593|ref|YP_003934867.1| ribonucleotide reductase B subunit [Shigella phage SP18] gi|308206185|gb|ADO19584.1| ribonucleotide reductase B subunit [Shigella phage SP18] Length = 392 Score = 62.7 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 7/107 (6%) Query: 2 RDESLHLNFGIDVINQIKIE-NPHLWTK---EFQQKSRTMLHEATLLEIAYAHETMPK-G 56 RDE LHL ++ Q++ + W K E + ++ + E E +A G Sbjct: 249 RDEQLHLKGTQYILRQLQTGVDGDEWVKIAHECEAEAAAIFMEVNRQEKEWAVHLFKDGG 308 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGL--EPLFKYTENPFPWMSEVID 101 GL+ +++ ++ R Q GL E + + T++P PW+ E ++ Sbjct: 309 LPGLSVEILNRFIDYLTVSRMKQCGLPCEIVLESTKHPIPWIREYLN 355 >gi|228926484|ref|ZP_04089556.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228833308|gb|EEM78873.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 322 Score = 62.7 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 11/127 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AYA E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYAEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP + L+ + +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304 Query: 117 QQGAELK 123 + ++ Sbjct: 305 VKATNVE 311 >gi|126700615|ref|YP_001089512.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium difficile 630] gi|255102106|ref|ZP_05331083.1| ribonucleoside-diphosphate reductase beta chain [Clostridium difficile QCD-63q42] gi|255307975|ref|ZP_05352146.1| ribonucleoside-diphosphate reductase beta chain [Clostridium difficile ATCC 43255] gi|115252052|emb|CAJ69888.1| Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide reductase small subunit) [Clostridium difficile] Length = 323 Score = 62.4 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 7/121 (5%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH + + +I + + ++K ++L+ EI Y + + + Sbjct: 196 LRDESLHGKYIGLLAQEIYDSFDKMDKEMLEEKMYSILYSLMENEIEYTNVIYRESGL-- 253 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118 ++++ ANR +G E L+ NP + + + + +FF T+ YQ+ Sbjct: 254 -EKEVVNFLKYNANRALENLGFEKLYTVDAINPI--VLNGLSTETKTHDFFSTKGNGYQK 310 Query: 119 G 119 G Sbjct: 311 G 311 >gi|229160405|ref|ZP_04288403.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus R309803] gi|228623129|gb|EEK79957.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus R309803] Length = 322 Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + Q+ E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQLFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP + L+ + +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304 Query: 117 QQGAELK 123 + ++ Sbjct: 305 VKATNVE 311 >gi|47566242|ref|ZP_00237270.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus G9241] gi|47556795|gb|EAL15126.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus G9241] Length = 322 Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 14/132 (10%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP + L+ + +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304 Query: 117 QQGA---ELKWD 125 + +L D Sbjct: 305 VKATNVEKLSDD 316 >gi|229095937|ref|ZP_04226913.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus Rock3-29] gi|229114891|ref|ZP_04244304.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus Rock1-3] gi|228668583|gb|EEL24012.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus Rock1-3] gi|228687447|gb|EEL41349.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus Rock3-29] Length = 322 Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 14/132 (10%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + Q+ E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQLFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP + L+ + +FF + Y Sbjct: 250 -VDDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304 Query: 117 QQGA---ELKWD 125 + +L D Sbjct: 305 VKATNVEKLSDD 316 >gi|52143985|ref|YP_082843.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus E33L] gi|228984529|ref|ZP_04144706.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229155020|ref|ZP_04283134.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus ATCC 4342] gi|51977454|gb|AAU19004.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus E33L] gi|157955324|gb|ABW06037.1| NrdF [Bacillus thuringiensis serovar tochigiensis] gi|228628578|gb|EEK85291.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus ATCC 4342] gi|228775232|gb|EEM23621.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 322 Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 14/132 (10%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP + L+ + +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304 Query: 117 QQGA---ELKWD 125 + +L D Sbjct: 305 VKATNVEKLSDD 316 >gi|229029125|ref|ZP_04185222.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus AH1271] gi|228732183|gb|EEL83068.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus AH1271] Length = 322 Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 19/131 (14%) Query: 1 MRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56 +RDES+H F + ++ E+ +E Q++++ +L E +E+AY E Sbjct: 192 IRDESIHGVFVGILAQQLFTELSAED----QQEVQKETQELLMELYEIEMAYTEEIYTS- 246 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETR 112 +GL +++++ AN+ +GLEP F+ E NP + L+ + +FF + Sbjct: 247 -IGL-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVK 300 Query: 113 VTEYQQGAELK 123 Y + ++ Sbjct: 301 GNGYVKATNVE 311 >gi|30261453|ref|NP_843830.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus anthracis str. Ames] gi|47526645|ref|YP_017994.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus anthracis str. 'Ames Ancestor'] gi|49184287|ref|YP_027539.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus anthracis str. Sterne] gi|49477196|ref|YP_035577.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus thuringiensis serovar konkukian str. 97-27] gi|65318723|ref|ZP_00391682.1| COG0208: Ribonucleotide reductase, beta subunit [Bacillus anthracis str. A2012] gi|118476922|ref|YP_894073.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus thuringiensis str. Al Hakam] gi|165870361|ref|ZP_02215016.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. A0488] gi|167634337|ref|ZP_02392658.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. A0442] gi|167639338|ref|ZP_02397610.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. A0193] gi|170686782|ref|ZP_02878002.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. A0465] gi|170706310|ref|ZP_02896771.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. A0389] gi|177651561|ref|ZP_02934350.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. A0174] gi|190568085|ref|ZP_03020995.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis Tsiankovskii-I] gi|196035278|ref|ZP_03102683.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus W] gi|196046555|ref|ZP_03113780.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus 03BB108] gi|218902561|ref|YP_002450395.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus AH820] gi|225863317|ref|YP_002748695.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus 03BB102] gi|227815798|ref|YP_002815807.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. CDC 684] gi|228914025|ref|ZP_04077647.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228932735|ref|ZP_04095607.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228945050|ref|ZP_04107411.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229090407|ref|ZP_04221650.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus Rock3-42] gi|229120993|ref|ZP_04250235.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus 95/8201] gi|229183646|ref|ZP_04310869.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus BGSC 6E1] gi|229602752|ref|YP_002865867.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. A0248] gi|254682483|ref|ZP_05146344.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus anthracis str. CNEVA-9066] gi|254726146|ref|ZP_05187928.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus anthracis str. A1055] gi|254733899|ref|ZP_05191613.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus anthracis str. Western North America USA6153] gi|254740411|ref|ZP_05198102.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus anthracis str. Kruger B] gi|254753802|ref|ZP_05205837.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus anthracis str. Vollum] gi|254758897|ref|ZP_05210924.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus anthracis str. Australia 94] gi|301052993|ref|YP_003791204.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus anthracis CI] gi|30255307|gb|AAP25316.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. Ames] gi|47501793|gb|AAT30469.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. 'Ames Ancestor'] gi|49178214|gb|AAT53590.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. Sterne] gi|49328752|gb|AAT59398.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus thuringiensis serovar konkukian str. 97-27] gi|72414680|emb|CAG28950.1| ribonucleoside-diphosphate reductase class Ib beta chain [Bacillus anthracis] gi|118416147|gb|ABK84566.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Bacillus thuringiensis str. Al Hakam] gi|157955314|gb|ABW06029.1| NrdF [Bacillus thuringiensis serovar finitimus] gi|164713856|gb|EDR19378.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. A0488] gi|167512777|gb|EDR88151.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. A0193] gi|167530225|gb|EDR92951.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. A0442] gi|170128844|gb|EDS97710.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. A0389] gi|170669305|gb|EDT20048.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. A0465] gi|172082839|gb|EDT67902.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. A0174] gi|190560819|gb|EDV14794.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis Tsiankovskii-I] gi|195991955|gb|EDX55918.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus W] gi|196022739|gb|EDX61421.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus 03BB108] gi|218537212|gb|ACK89610.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus AH820] gi|225785957|gb|ACO26174.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus 03BB102] gi|227004217|gb|ACP13960.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. CDC 684] gi|228599889|gb|EEK57486.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus BGSC 6E1] gi|228662653|gb|EEL18251.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus 95/8201] gi|228692990|gb|EEL46708.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus Rock3-42] gi|228814719|gb|EEM60979.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228826940|gb|EEM72702.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228845630|gb|EEM90659.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229267160|gb|ACQ48797.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. A0248] gi|300375162|gb|ADK04066.1| ribonucleotide-diphosphate reductase beta subunit [Bacillus cereus biovar anthracis str. CI] gi|324325470|gb|ADY20730.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus thuringiensis serovar finitimus YBT-020] Length = 322 Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP + L+ + +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304 Query: 117 QQGAELK 123 + ++ Sbjct: 305 VKATNVE 311 >gi|229189534|ref|ZP_04316550.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus ATCC 10876] gi|228593979|gb|EEK51782.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus ATCC 10876] Length = 322 Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAKEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP + L+ + +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304 Query: 117 QQGAELK 123 + ++ Sbjct: 305 VKATNVE 311 >gi|164688728|ref|ZP_02212756.1| hypothetical protein CLOBAR_02375 [Clostridium bartlettii DSM 16795] gi|164602204|gb|EDQ95669.1| hypothetical protein CLOBAR_02375 [Clostridium bartlettii DSM 16795] Length = 327 Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 7/121 (5%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH + + +I + KE++ K + EI Y + GL Sbjct: 196 LRDESLHGKYIGLLAQEIFKDFSKEEQKEYKSKVMDVFDRLMENEINYTNTIYEG--TGL 253 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118 A ++++ ANR +G + + NP + + + + +FF T+ YQ+ Sbjct: 254 -ADEVINFLKYNANRAMENLGYDNRLEVDPVNPI--VLNGLSTETKTHDFFSTKGNGYQK 310 Query: 119 G 119 G Sbjct: 311 G 311 >gi|42780545|ref|NP_977792.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus ATCC 10987] gi|42736465|gb|AAS40400.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus ATCC 10987] Length = 322 Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP + L+ + +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304 Query: 117 QQGAELK 123 + ++ Sbjct: 305 VKATNVE 311 >gi|157955319|gb|ABW06033.1| NrdF [Bacillus thuringiensis serovar pakistani] Length = 322 Score = 61.6 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSTEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP + L+ + +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304 Query: 117 QQGAELK 123 + ++ Sbjct: 305 VKATNVE 311 >gi|218233288|ref|YP_002366135.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus B4264] gi|229149653|ref|ZP_04277884.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus m1550] gi|157955328|gb|ABW06040.1| NrdF [Bacillus thuringiensis serovar entomocidus] gi|157955388|gb|ABW06085.1| NrdF [Bacillus thuringiensis serovar subtoxicus] gi|157955409|gb|ABW06101.1| NrdF [Bacillus cereus] gi|218161245|gb|ACK61237.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus B4264] gi|228633863|gb|EEK90461.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus m1550] Length = 322 Score = 61.6 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQDLLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP + L+ + +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304 Query: 117 QQGAELK 123 + ++ Sbjct: 305 VKATNVE 311 >gi|157955332|gb|ABW06043.1| NrdF [Bacillus thuringiensis serovar galleriae] gi|157955344|gb|ABW06052.1| NrdF [Bacillus thuringiensis serovar tolworthi] Length = 322 Score = 61.6 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSVEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP + L+ + +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304 Query: 117 QQGAELK 123 + ++ Sbjct: 305 VKATNVE 311 >gi|157955376|gb|ABW06076.1| NrdF [Bacillus thuringiensis serovar morrisoni] Length = 322 Score = 61.6 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP + L+ + +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304 Query: 117 QQGAELK 123 + ++ Sbjct: 305 VKATNVE 311 >gi|228938567|ref|ZP_04101175.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971446|ref|ZP_04132072.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978059|ref|ZP_04138438.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis Bt407] gi|157955340|gb|ABW06049.1| NrdF [Bacillus thuringiensis serovar thuringiensis] gi|157955368|gb|ABW06070.1| NrdF [Bacillus thuringiensis serovar galechiae] gi|157955384|gb|ABW06082.1| NrdF [Bacillus thuringiensis serovar sotto] gi|228781720|gb|EEM29919.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis Bt407] gi|228788313|gb|EEM36266.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821165|gb|EEM67182.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326939076|gb|AEA14972.1| ribonucleotide-diphosphate reductase [Bacillus thuringiensis serovar chinensis CT-43] Length = 322 Score = 61.6 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP + L+ + +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304 Query: 117 QQGAELK 123 + ++ Sbjct: 305 VKATNVE 311 >gi|229177859|ref|ZP_04305232.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus 172560W] gi|228605650|gb|EEK63098.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus 172560W] Length = 322 Score = 61.6 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP + L+ + +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304 Query: 117 QQGAELK 123 + ++ Sbjct: 305 VKATNVE 311 >gi|228907084|ref|ZP_04070948.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis IBL 200] gi|157955401|gb|ABW06095.1| NrdF [Bacillus thuringiensis serovar toumanoffi] gi|228852588|gb|EEM97378.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis IBL 200] Length = 322 Score = 61.6 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP + L+ + +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304 Query: 117 QQGAELK 123 + ++ Sbjct: 305 VKATNVE 311 >gi|75759355|ref|ZP_00739452.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218896385|ref|YP_002444796.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus G9842] gi|228900033|ref|ZP_04064269.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis IBL 4222] gi|228920164|ref|ZP_04083513.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228964415|ref|ZP_04125529.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar sotto str. T04001] gi|74493187|gb|EAO56306.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|157955348|gb|ABW06055.1| NrdF [Bacillus thuringiensis serovar alesti] gi|157955356|gb|ABW06061.1| NrdF [Bacillus thuringiensis serovar dakota] gi|157955360|gb|ABW06064.1| NrdF [Bacillus thuringiensis serovar darmstadiensis] gi|157955364|gb|ABW06067.1| NrdF [Bacillus thuringiensis serovar dendrolimus] gi|157955380|gb|ABW06079.1| NrdF [Bacillus thuringiensis serovar ostriniae] gi|218545942|gb|ACK98336.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus G9842] gi|228795272|gb|EEM42764.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar sotto str. T04001] gi|228839620|gb|EEM84912.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228859647|gb|EEN04071.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis IBL 4222] Length = 322 Score = 61.6 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP + L+ + +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304 Query: 117 QQGAELK 123 + ++ Sbjct: 305 VKATNVE 311 >gi|157955305|gb|ABW06022.1| NrdF [Bacillus thuringiensis serovar aizawai] gi|157955352|gb|ABW06058.1| NrdF [Bacillus thuringiensis serovar colmeri] gi|157955372|gb|ABW06073.1| NrdF [Bacillus thuringiensis serovar indiana] gi|157955405|gb|ABW06098.1| NrdF [Bacillus thuringiensis serovar wuhanensis] Length = 322 Score = 61.6 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSVEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP + L+ + +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304 Query: 117 QQGAELK 123 + ++ Sbjct: 305 VKATNVE 311 >gi|30019505|ref|NP_831136.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus ATCC 14579] gi|229043194|ref|ZP_04190917.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus AH676] gi|229078637|ref|ZP_04211194.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus Rock4-2] gi|229108909|ref|ZP_04238513.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus Rock1-15] gi|229126769|ref|ZP_04255781.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus BDRD-Cer4] gi|229144056|ref|ZP_04272472.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus BDRD-ST24] gi|296502033|ref|YP_003663733.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus thuringiensis BMB171] gi|29895049|gb|AAP08337.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus ATCC 14579] gi|157955310|gb|ABW06026.1| NrdF [Bacillus thuringiensis serovar canadensis] gi|157955392|gb|ABW06088.1| NrdF [Bacillus thuringiensis serovar thompsoni] gi|157955396|gb|ABW06091.1| NrdF [Bacillus thuringiensis serovar tohokuensis] gi|228639453|gb|EEK95867.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus BDRD-ST24] gi|228656709|gb|EEL12535.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus BDRD-Cer4] gi|228674565|gb|EEL29805.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus Rock1-15] gi|228704707|gb|EEL57136.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus Rock4-2] gi|228726156|gb|EEL77390.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus AH676] gi|296323085|gb|ADH06013.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus thuringiensis BMB171] Length = 322 Score = 61.6 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP + L+ + +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304 Query: 117 QQGAELK 123 + ++ Sbjct: 305 VKATNVE 311 >gi|157955336|gb|ABW06046.1| NrdF [Bacillus thuringiensis serovar kurstaki] Length = 322 Score = 61.6 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 11/127 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E + +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSVEEQQEVQKETQELLMELSEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP + L+ + +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304 Query: 117 QQGAELK 123 + ++ Sbjct: 305 VKATNVE 311 >gi|229084444|ref|ZP_04216723.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus Rock3-44] gi|228698872|gb|EEL51578.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus Rock3-44] Length = 322 Score = 61.2 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 14/132 (10%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTDEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP + L+ + +FF + Y Sbjct: 250 -VEEVNRFVRYNANKGLMNLGLEPRFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304 Query: 117 QQGA---ELKWD 125 + +L D Sbjct: 305 VKATNVEKLSDD 316 >gi|156096873|ref|XP_001614470.1| ribonucleotide reductase small subunit [Plasmodium vivax SaI-1] gi|148803344|gb|EDL44743.1| ribonucleotide reductase small subunit, putative [Plasmodium vivax] Length = 335 Score = 61.2 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 8/94 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N HL K + A LE ++ E + + + Sbjct: 215 RDEYLHGDFSVMCCN-------HLNNKLKYESLLDYFKMAVELEYQFSMEMLELSVLKIK 267 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 95 + +++++A+ + F ++ PF W Sbjct: 268 KEQVKSFLEYLADTMLVNLKHPKYFN-SKYPFTW 300 >gi|163939261|ref|YP_001644145.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus weihenstephanensis KBAB4] gi|229010750|ref|ZP_04167947.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides DSM 2048] gi|229132251|ref|ZP_04261107.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus BDRD-ST196] gi|229166287|ref|ZP_04294046.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus AH621] gi|163861458|gb|ABY42517.1| Ribonucleoside-diphosphate reductase [Bacillus weihenstephanensis KBAB4] gi|228617232|gb|EEK74298.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus AH621] gi|228651189|gb|EEL07168.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus BDRD-ST196] gi|228750424|gb|EEM00253.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides DSM 2048] Length = 322 Score = 61.2 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 19/131 (14%) Query: 1 MRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56 +RDES+H F + ++ E +E Q +++ +L E +E+AY E Sbjct: 192 IRDESIHGVFVGILAQQIFTELSAEE----QQEVQTETQELLMELYEIELAYTEEIYTS- 246 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETR 112 +GL +++++ AN+ +GLEP F+ E NP + L+ + +FF + Sbjct: 247 -IGL-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVK 300 Query: 113 VTEYQQGAELK 123 Y + ++ Sbjct: 301 GNGYVKATNVE 311 >gi|228990454|ref|ZP_04150419.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus pseudomycoides DSM 12442] gi|228996556|ref|ZP_04156195.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides Rock3-17] gi|229004206|ref|ZP_04162007.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides Rock1-4] gi|228757067|gb|EEM06311.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides Rock1-4] gi|228763188|gb|EEM12096.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides Rock3-17] gi|228768980|gb|EEM17578.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus pseudomycoides DSM 12442] Length = 322 Score = 60.8 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFAEFSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP + L+ + +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPRFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304 Query: 117 QQGAELK 123 + ++ Sbjct: 305 VKATNVE 311 >gi|213420352|ref|ZP_03353418.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 88 Score = 60.8 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 5/81 (6%) Query: 50 HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKN 107 G +GLN QY+++I N R +GL+ F+ NP PW++ ++ + Sbjct: 1 DYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVA 60 Query: 108 FFETRVTEY---QQGAELKWD 125 E V+ Y Q +E+ D Sbjct: 61 PQEVEVSSYLVGQIDSEVDTD 81 >gi|147800139|emb|CAN68817.1| hypothetical protein VITISV_036653 [Vitis vinifera] Length = 924 Score = 60.8 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122 +Y + + + E + ENPF WM E I L+ NFF+ R+ +YQ+ + + Sbjct: 731 EDLYKYQSYKWDX-TVALXYERKYN-VENPFDWM-EFISLQGNANFFQRRMGDYQKASIM 787 Query: 123 K 123 Sbjct: 788 S 788 >gi|152974880|ref|YP_001374397.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023632|gb|ABS21402.1| Ribonucleoside-diphosphate reductase [Bacillus cytotoxicus NVH 391-98] Length = 322 Score = 60.8 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 14/132 (10%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E ++ Q++++ +L E +E AY E +GL Sbjct: 192 IRDESIHGVFVGLLAQQIFAELSAEEQEDVQKETQDLLMELYEIETAYTEEIY--ASIGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP + L+ + +FF + Y Sbjct: 250 -VGEVNRFVRYNANKGLMNLGLEPRFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304 Query: 117 QQGA---ELKWD 125 + +L D Sbjct: 305 VKATNVEKLSDD 316 >gi|229057079|ref|ZP_04196471.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus AH603] gi|228720220|gb|EEL71799.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus AH603] Length = 322 Score = 60.8 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 11/127 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + QI E +E Q +++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQIFTELSAKEQQEVQTETQELLMELYEIELAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP + L+ + +FF + Y Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304 Query: 117 QQGAELK 123 + ++ Sbjct: 305 VKATNVE 311 >gi|301331892|gb|ADK70922.1| U27.5 [Elephant endotheliotropic herpesvirus 2] Length = 301 Score = 60.8 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 47/118 (39%), Gaps = 12/118 (10%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDES+H + + P + ++ + +E + + + G +N Sbjct: 185 RDESIHTTAATKLY--LNYVTPE--NRPSYSFIYSLFSDVIRIEKEFINAKV-DGVGLIN 239 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKNFFETRVTEY 116 ++ +A++ +I ++PL+ P P + ++K FFE R TEY Sbjct: 240 KKVIFDTLEGVADQLLARINMQPLYATQIPNNCPLP----LSTIEKNVCFFEKRNTEY 293 >gi|269123322|ref|YP_003305899.1| Ribonucleoside-diphosphate reductase [Streptobacillus moniliformis DSM 12112] gi|268314648|gb|ACZ01022.1| Ribonucleoside-diphosphate reductase [Streptobacillus moniliformis DSM 12112] Length = 333 Score = 60.4 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 55/118 (46%), Gaps = 7/118 (5%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DES+H F + +I E + + +++ + +E E+ + E VGL + Sbjct: 199 DESIHGVFVGKLAQEIFEEMSFVEKESVKKEIMNLFYELYENELKFTDEIYSD--VGLTS 256 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118 ++Y+++ N+ +G + F+ E N + ++++ + +FF + T Y++ Sbjct: 257 E-VKEYIRYNGNKALMNLGFKEEFEIKEVNAI--VLNGLNVETTQHDFFSKKSTNYEK 311 >gi|258597037|ref|XP_001347439.2| ribonucleotide reductase small subunit, putative [Plasmodium falciparum 3D7] gi|254922415|gb|AAN35352.2| ribonucleotide reductase small subunit, putative [Plasmodium falciparum 3D7] Length = 335 Score = 60.4 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 8/94 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N HL K + A LE ++ E + + + Sbjct: 215 RDEYLHGDFSVMCCN-------HLVNKLKYEHVLDYFKMAVDLEYQFSLEMLELNVLKIK 267 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 95 +++++ + + + ++ PF W Sbjct: 268 KEQVRAFLEYLTDTMLTNLKYPKHYN-SKYPFSW 300 >gi|229102053|ref|ZP_04232765.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus Rock3-28] gi|228681373|gb|EEL35538.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus Rock3-28] Length = 322 Score = 60.4 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 14/132 (10%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + Q+ E +E Q++++ +L E +E+AY E +GL Sbjct: 192 IRDESIHGVFVGILAQQLFAELSAEDQQEVQKETQVLLMELYEIEMAYTEEIYTS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116 +++++ AN+ +GLEP F+ E NP + L+ + +FF + Y Sbjct: 250 -VDDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304 Query: 117 QQGA---ELKWD 125 + +L D Sbjct: 305 VKATNVEKLSDD 316 >gi|50404173|gb|AAT76849.1| ribonucleotide reductase small subunit [Plasmodium falciparum] Length = 324 Score = 60.4 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 8/94 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N HL K + A LE ++ E + + + Sbjct: 204 RDEYLHGDFSVMCCN-------HLVNKLKYEHVLDYFKMAVDLEYQFSLEMLELNVLKIK 256 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 95 +++++ + + + ++ PF W Sbjct: 257 KEQVRAFLEYLTDTMLTNLKYPKHYN-SKYPFSW 289 >gi|221055321|ref|XP_002258799.1| Ribonucleotide reductase small subunit [Plasmodium knowlesi strain H] gi|193808869|emb|CAQ39572.1| Ribonucleotide reductase small subunit,putative [Plasmodium knowlesi strain H] Length = 335 Score = 60.0 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 8/94 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE LH +F + N HL K ++ A LE +A E + + + Sbjct: 215 RDEYLHGDFSVMCCN-------HLNNKLKYERLLDYFKMAVKLEYQFAIEMLDLSVLKIK 267 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 95 + +++++A+ + F ++ PF W Sbjct: 268 KEQVKSFLEYLADTMLVNLKHPKYFN-SKYPFTW 300 >gi|296086890|emb|CBI33063.3| unnamed protein product [Vitis vinifera] Length = 75 Score = 60.0 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL 102 +NA QY++F+A+ IG E + ENPF WM E I L Sbjct: 1 MNATLMSQYIKFVADHLLVAIGYERKYN-VENPFDWM-EFISL 41 >gi|213855386|ref|ZP_03383626.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 80 Score = 59.7 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 4/73 (5%) Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115 +GLN QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Sbjct: 1 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 60 Query: 116 Y---QQGAELKWD 125 Y Q +E+ D Sbjct: 61 YLVGQIDSEVDTD 73 >gi|326483608|gb|EGE07618.1| hypothetical protein TEQG_06532 [Trichophyton equinum CBS 127.97] Length = 317 Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 22/53 (41%), Gaps = 7/53 (13%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP 54 RDE LH +F + + HL + ++ EA +E + + +P Sbjct: 272 RDEGLHTDFACLLFS-------HLNYRPDPNAVEAIITEAVTIEQEFLTDALP 317 >gi|320450283|ref|YP_004202379.1| ribonucleoside-diphosphate reductase subunit beta [Thermus scotoductus SA-01] gi|320150452|gb|ADW21830.1| ribonucleoside-diphosphate reductase, subunit beta [Thermus scotoductus SA-01] Length = 323 Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 48/123 (39%), Gaps = 12/123 (9%) Query: 4 ESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLH-EATLLEIAYAHETMPKGFV 58 E+LH FG++++ ++ E P L +T+E + E LLE +A Sbjct: 194 ENLHGLFGVELLRILREERPDLFGPSFTEEALDRVEAFFRTEEALLEWIFAR----GDTE 249 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTE 115 + +++++ N+ GL F + W + KE +FF R Sbjct: 250 AVRGEEVLEFLKWRYNQVLALHGLPAPFPVRKECLRDTEWFDLELLADKEVDFFNKRSVA 309 Query: 116 YQQ 118 Y + Sbjct: 310 YAR 312 >gi|332672470|ref|YP_004421714.1| Ribonucleotide reductase, small subunit [Campylobacter phage NCTC12673] gi|327493647|gb|AEA86506.1| Ribonucleotide reductase, small subunit [Campylobacter phage NCTC12673] Length = 378 Score = 58.9 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 42/93 (45%), Gaps = 5/93 (5%) Query: 3 DESLHLNFGIDVINQIKIENP----HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57 DE +HL ++ ++ E HL+ +K+R + + E+ +A + G Sbjct: 222 DEDIHLVIFSFILKTLRSEQHQGFSHLFDDSLSRKARKIAKKVYQDELEWAKYLLSMGPI 281 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90 GL + + +++F + R + G +P++ + Sbjct: 282 PGLTIENIDGFLKFFVDDRLKKCGFQPIWNAPK 314 >gi|311068263|ref|YP_003973186.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus atrophaeus 1942] gi|310868780|gb|ADP32255.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus atrophaeus 1942] Length = 328 Score = 58.9 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 60/129 (46%), Gaps = 9/129 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +I + P E ++ S +L + E+ Y + VGL Sbjct: 195 LRDEAIHGVYIGLLAQEIYNKQPEEKKAELREFSIELLEQLYENELEYTEDLY--DQVGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118 + ++++++ AN+ +G + F+ E NP + ++ K + +FF + Y++ Sbjct: 253 S-HDVKKFIRYNANKALMNLGFDSYFEEEEINPI--VLNGLNTKTKSHDFFSMKGNGYKK 309 Query: 119 GAE--LKWD 125 +K D Sbjct: 310 ATVEPIKDD 318 >gi|328912184|gb|AEB63780.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus amyloliquefaciens LL3] Length = 305 Score = 58.1 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 55/123 (44%), Gaps = 7/123 (5%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE+LH + + +I + + KE + + +L + E+ Y + VGL Sbjct: 176 IRDEALHGVYTGLLAQEIYSKQTEIKKKELYKWTIDLLLDLYENELDYTTDLY--DPVGL 233 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118 ++++++ AN+ + +G + F E NP + + K + +FF + Y++ Sbjct: 234 T-HDVKKFIRYNANKALNNLGFDHYFHEEEINPV--VLNGLSTKTKSMDFFSQKGNSYRK 290 Query: 119 GAE 121 Sbjct: 291 ATA 293 >gi|299537049|ref|ZP_07050352.1| ribonucleoside-diphosphate reductase subunit beta [Lysinibacillus fusiformis ZC1] gi|298727290|gb|EFI67862.1| ribonucleoside-diphosphate reductase subunit beta [Lysinibacillus fusiformis ZC1] Length = 322 Score = 58.1 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 50/124 (40%), Gaps = 13/124 (10%) Query: 1 MRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56 +RDES+H F ++ Q E +E +L + E+ Y + + Sbjct: 193 LRDESIHGVAVGFFAQNLFKQFSKE----KQEELHLWGYELLLDLYQNEMKYTDDIYAE- 247 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTE 115 GL+ Y+++ AN+ +G E +F E NP M+ + + +FF + Sbjct: 248 -TGLSPE-VRAYVRYNANKALMNVGFEAMFPEEEVNPIV-MNGIRNEGSTYDFFSQKGAT 304 Query: 116 YQQG 119 Y + Sbjct: 305 YAKA 308 >gi|325989612|ref|YP_004249311.1| ribonucleoside-diphosphate reductase beta chain [Mycoplasma suis KI3806] gi|323574697|emb|CBZ40353.1| Ribonucleoside-diphosphate reductase beta chain [Mycoplasma suis] Length = 330 Score = 57.7 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 56/127 (44%), Gaps = 9/127 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVG 59 +RDE++H + ++ +++ ++ +++ ++L E EI Y + P VG Sbjct: 200 IRDEAIHGLYIGNLASKLFSTFDSEKQEKLKKQVYSLLEELMENEIEYTEKIYSPINLVG 259 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEY 116 Q++++ AN+ + LE + TE NP + K +FF T+ Y Sbjct: 260 ----EVIQFLKYNANKALQNLDLEEKYDVTENDINPMIFNGLNTSTKNH-DFFSTKGNGY 314 Query: 117 QQGAELK 123 + ++ Sbjct: 315 IKTTHVE 321 >gi|16078802|ref|NP_389621.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus subtilis subsp. subtilis str. 168] gi|221309618|ref|ZP_03591465.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus subtilis subsp. subtilis str. 168] gi|221313941|ref|ZP_03595746.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318864|ref|ZP_03600158.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus subtilis subsp. subtilis str. JH642] gi|221323136|ref|ZP_03604430.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus subtilis subsp. subtilis str. SMY] gi|321315508|ref|YP_004207795.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus subtilis BSn5] gi|1710395|sp|P50621|RIR2_BACSU RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit gi|1154633|emb|CAA92811.1| NrdF [Bacillus subtilis subsp. subtilis str. 168] gi|2634123|emb|CAB13623.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus subtilis subsp. subtilis str. 168] gi|116733911|gb|ABK20014.1| ribonucleotide-diphosphate reductase beta [synthetic construct] gi|291484287|dbj|BAI85362.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus subtilis subsp. natto BEST195] gi|320021782|gb|ADV96768.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus subtilis BSn5] Length = 329 Score = 57.7 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 61/129 (47%), Gaps = 9/129 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +I + E ++ + +L++ E+ Y + VGL Sbjct: 195 LRDEAIHGVYVGLLAQEIYNKQTEEKKAELREFAIDLLNQLYENELEYTEDLY--DQVGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118 + ++++++ AN+ +G +P F+ + NP + ++ K + +FF + Y++ Sbjct: 253 S-HDVKKFIRYNANKALMNLGFDPYFEEEDINPI--VLNGLNTKTKSHDFFSMKGNGYKK 309 Query: 119 GAE--LKWD 125 LK D Sbjct: 310 ATVEPLKDD 318 >gi|327440528|dbj|BAK16893.1| ribonucleotide reductase, beta subunit [Solibacillus silvestris StLB046] Length = 320 Score = 57.7 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 15/132 (11%) Query: 1 MRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56 +RDES+H F ++ E +E L + E+ Y + + Sbjct: 193 LRDESIHGVAVGFFAQNIFKTFTEE----KQQELTLWGYEYLLDLYQNEMKYTDDLYAE- 247 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTE 115 GL+ ++Y+++ AN+ +GL+ +F E NP M+ + + +FF + + Sbjct: 248 -TGLSPE-VKKYVRYNANKALMNLGLDTMFPDEEVNPVV-MNGISNTGSTYDFFSQKGST 304 Query: 116 Y--QQGAELKWD 125 Y + A + D Sbjct: 305 YAVAKVAPITDD 316 >gi|325973169|ref|YP_004250233.1| ribonucleoside-diphosphate reductase subunit beta [Mycoplasma suis str. Illinois] gi|323651771|gb|ADX97853.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma suis str. Illinois] Length = 330 Score = 57.7 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 56/127 (44%), Gaps = 9/127 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVG 59 +RDE++H + ++ +++ ++ +++ ++L E EI Y + P VG Sbjct: 200 IRDEAIHGLYIGNLASKLFSTFDSEKQEKLKKQVYSLLEELMENEIEYTEKVYSPINLVG 259 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEY 116 Q++++ AN+ + LE + TE NP + K +FF T+ Y Sbjct: 260 ----EVIQFLKYNANKALQNLDLEEKYDVTENDINPMIFNGLNTSTKNH-DFFSTKGNGY 314 Query: 117 QQGAELK 123 + ++ Sbjct: 315 IKTTHVE 321 >gi|169827410|ref|YP_001697568.1| ribonucleoside-diphosphate reductase subunit beta [Lysinibacillus sphaericus C3-41] gi|168991898|gb|ACA39438.1| Ribonucleoside-diphosphate reductase subunit beta [Lysinibacillus sphaericus C3-41] Length = 318 Score = 57.7 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 13/124 (10%) Query: 1 MRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56 +RDES+H F ++ Q E + Q +L + E+ Y + + Sbjct: 189 LRDESIHGVAVGFFAQNLYKQFSKE----KQEALQLWGYELLLDLYQNEMKYTEDIYAE- 243 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTE 115 GL+ + Y+++ AN+ +G E +F E NP M+ + + +FF + Sbjct: 244 -TGLSPE-VKAYVRYNANKALMNVGFEAMFPEEEVNPIV-MNGIRNEGSTYDFFSQKGAT 300 Query: 116 YQQG 119 Y + Sbjct: 301 YAKA 304 >gi|294669616|ref|ZP_06734683.1| hypothetical protein NEIELOOT_01517 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308529|gb|EFE49772.1| hypothetical protein NEIELOOT_01517 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 81 Score = 57.7 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 101 +GLN QY+++I N R +GL F+ T+NP PW++ + Sbjct: 1 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLS 46 >gi|126650012|ref|ZP_01722245.1| ribonucleotide-diphosphate [Bacillus sp. B14905] gi|126593184|gb|EAZ87146.1| ribonucleotide-diphosphate [Bacillus sp. B14905] Length = 322 Score = 57.7 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 13/124 (10%) Query: 1 MRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56 +RDES+H F ++ Q E + Q +L + E+ Y + + Sbjct: 193 LRDESIHGVAVGFFAQNLYKQFSKE----KQESLQLWGYELLLDLYQNEMKYTEDIYAE- 247 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTE 115 GL+ + Y+++ AN+ +G E +F E NP M+ + + +FF + Sbjct: 248 -TGLSPE-VKAYVRYNANKALMNVGFEAMFPEEEVNPIV-MNGIRNEGSTYDFFSQKGAT 304 Query: 116 YQQG 119 Y + Sbjct: 305 YAKA 308 >gi|269121363|ref|YP_003309540.1| ribonucleoside-diphosphate reductase [Sebaldella termitidis ATCC 33386] gi|268615241|gb|ACZ09609.1| Ribonucleoside-diphosphate reductase [Sebaldella termitidis ATCC 33386] Length = 331 Score = 57.7 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 59/123 (47%), Gaps = 15/123 (12%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKS----RTMLHEATLLEIAYAHETMPKGFV 58 DES+H F + + E +T E QQ+ + +++ E+ Y E + + Sbjct: 197 DESIHGVF----VGLLAQEFFKKFTPEDQQRIEKNLKELMYVLYENELKYTDEVYTE--I 250 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEY 116 GL+ ++Y+++ AN+ +G + F+ E NP + ++++ + +FF + T Y Sbjct: 251 GLSGD-VKEYIRYNANKALMNLGFDEEFEVKEVNPI--VLNGLNVETTQHDFFSKKSTNY 307 Query: 117 QQG 119 ++ Sbjct: 308 EKA 310 >gi|308172806|ref|YP_003919511.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus amyloliquefaciens DSM 7] gi|307605670|emb|CBI42041.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus amyloliquefaciens DSM 7] Length = 327 Score = 57.4 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 53/125 (42%), Gaps = 11/125 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +I + E + + +L E E+AY + VGL Sbjct: 198 IRDEAIHGVYVGLLAQEIYGKQDPDVQLEMRDFAVELLTELYDNEVAYTEDLY--DAVGL 255 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK---NFFETRVTEY 116 ++++++ AN+ +G +P F + NP + L + +FF + Y Sbjct: 256 T-HDVKRFLRYNANKALQNLGFDPYFEEERPNPI----VMNGLNTKTKSHDFFSQKGNGY 310 Query: 117 QQGAE 121 ++ Sbjct: 311 KKATV 315 >gi|70946075|ref|XP_742789.1| ribonucleotide reductase small subunit [Plasmodium chabaudi chabaudi] gi|56521965|emb|CAH76799.1| ribonucleotide reductase small subunit, putative [Plasmodium chabaudi chabaudi] Length = 211 Score = 57.4 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 36/94 (38%), Gaps = 8/94 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE L +F + N HL K + A LE + E + + + Sbjct: 91 RDEYLQGDFSVMCCN-------HLNNKLKYENVLDYFKTAVDLEYNFCVEMLDFDSLKIT 143 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 95 +Q++Q++A+ + + ++ PF W Sbjct: 144 KDQVKQFLQYLADTMLVNLKYSKHYN-SKYPFTW 176 >gi|296330954|ref|ZP_06873429.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674472|ref|YP_003866144.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus subtilis subsp. spizizenii str. W23] gi|296151959|gb|EFG92833.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412716|gb|ADM37835.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus subtilis subsp. spizizenii str. W23] Length = 329 Score = 57.4 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 60/129 (46%), Gaps = 9/129 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +I + E + + +L+E E+ Y + VGL Sbjct: 195 LRDEAIHGVYVGLLAQEIYNKQTEEKKAELRGFAIDLLNELYENELEYTEDLY--DQVGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118 + ++++++ AN+ +G +P F+ + NP + ++ K + +FF + Y++ Sbjct: 253 S-HDVKKFIRYNANKALMNLGFDPYFEEEDINPI--VLNGLNTKTKSHDFFSMKGNGYKK 309 Query: 119 GAE--LKWD 125 LK D Sbjct: 310 ATVEPLKDD 318 >gi|52080345|ref|YP_079136.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus licheniformis ATCC 14580] gi|52785724|ref|YP_091553.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus licheniformis ATCC 14580] gi|319645870|ref|ZP_08000100.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus sp. BT1B_CT2] gi|52003556|gb|AAU23498.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus licheniformis ATCC 14580] gi|52348226|gb|AAU40860.1| NrdF [Bacillus licheniformis ATCC 14580] gi|317391620|gb|EFV72417.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus sp. BT1B_CT2] Length = 325 Score = 57.4 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 15/127 (11%) Query: 1 MRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56 +RDE++H ++ NQ E E S +L E E+ Y + Sbjct: 195 LRDEAIHGVYVGLLAQEIYNQQTPEKKE----ELYAFSIDLLKELYENELEYTEDLY--D 248 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVT 114 VGL+ ++++++ AN+ +G E F+ E NP + ++ K + +FF + Sbjct: 249 QVGLS-HDVKKFIRYNANKALMNLGFEAYFEEEEINPI--VLNGLNTKTKSHDFFSMKGN 305 Query: 115 EYQQGAE 121 Y++ Sbjct: 306 GYKKATV 312 >gi|251797995|ref|YP_003012726.1| ribonucleotide-diphosphate reductase subunit beta [Paenibacillus sp. JDR-2] gi|247545621|gb|ACT02640.1| Ribonucleoside-diphosphate reductase [Paenibacillus sp. JDR-2] Length = 318 Score = 57.0 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 51/123 (41%), Gaps = 13/123 (10%) Query: 1 MRDESLHL----NFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56 +RDES+H ++ NQ E + +++ +L+ E+ Y Sbjct: 188 LRDESIHGLYVGVLAQELFNQFTPEE----QAQLKEEVFALLNTLYENEVVYTDNLY--S 241 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTE 115 +GL + Y+++ AN+ +G EP F NP + + + K+ +FF + Sbjct: 242 PIGL-QEDVKAYVRYNANKALMNLGFEPYFPEEPVNPIVF-NGISTHTKQHDFFSKKGNG 299 Query: 116 YQQ 118 Y + Sbjct: 300 YVR 302 >gi|229172094|ref|ZP_04299659.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus MM3] gi|228611437|gb|EEK68694.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus MM3] Length = 133 Score = 57.0 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 5/124 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 ++DES+H F + Q+ +E +E Q++++ +L E +E+AY E +GL Sbjct: 3 VKDESIHGVFVGILAQQLFVELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 60 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +++++ AN+ +GLEP F+ E NP ++ + K +FF + Y + Sbjct: 61 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 118 Query: 120 AELK 123 ++ Sbjct: 119 TNVE 122 >gi|82793227|ref|XP_727957.1| ribonucleotide reductase [Plasmodium yoelii yoelii str. 17XNL] gi|23484058|gb|EAA19522.1| ribonucleotide reductase, putative [Plasmodium yoelii yoelii] Length = 373 Score = 57.0 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 8/94 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE L +F + N HL K + A LE + + + F+ + Sbjct: 215 RDEYLQGDFSVMCCN-------HLNNKLRYENVLNYFKAAVELEYNFCVDMLDFDFLKIT 267 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 95 +Q++Q++A+ + + ++ PF W Sbjct: 268 KDQVKQFLQYLADTMLLNLKYPKHYN-SKYPFAW 300 >gi|196040733|ref|ZP_03108032.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus NVH0597-99] gi|206977638|ref|ZP_03238531.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus H3081.97] gi|217958931|ref|YP_002337479.1| ribonucleoside-diphosphate reductase, subunit beta [Bacillus cereus AH187] gi|222095088|ref|YP_002529148.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus Q1] gi|229138142|ref|ZP_04266740.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus BDRD-ST26] gi|229195652|ref|ZP_04322418.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus m1293] gi|196028523|gb|EDX67131.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus NVH0597-99] gi|206744211|gb|EDZ55625.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus H3081.97] gi|217064629|gb|ACJ78879.1| ribonucleoside-diphosphate reductase, subunit beta [Bacillus cereus AH187] gi|221239146|gb|ACM11856.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus Q1] gi|228587901|gb|EEK45953.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus m1293] gi|228645487|gb|EEL01721.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus BDRD-ST26] Length = 133 Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 5/124 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 ++DES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 3 VKDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 60 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +++++ AN+ +GLEP F+ E NP ++ + K +FF + Y + Sbjct: 61 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 118 Query: 120 AELK 123 ++ Sbjct: 119 TNVE 122 >gi|317495971|ref|ZP_07954333.1| ribonucleotide reductase [Gemella moribillum M424] gi|316913875|gb|EFV35359.1| ribonucleotide reductase [Gemella moribillum M424] Length = 322 Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 49/123 (39%), Gaps = 15/123 (12%) Query: 3 DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58 DE++H +F ++ + E KE T+L + E+ Y + + + Sbjct: 195 DETIHGSFTGFDAQEIFKTLTPEEQEKANKEM----YTLLLDLYENELKYTKDIYGE--I 248 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEY 116 GL + Y+++ ANR +G F+ E NP + ++ + +FF + Y Sbjct: 249 GL-FEEVKDYVEYNANRALANLGYPGYFEDKEINPI--IENAMNTSTKNHDFFSVKGDGY 305 Query: 117 QQG 119 Sbjct: 306 VVS 308 >gi|154686152|ref|YP_001421313.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus amyloliquefaciens FZB42] gi|154352003|gb|ABS74082.1| NrdF [Bacillus amyloliquefaciens FZB42] Length = 329 Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 58/123 (47%), Gaps = 7/123 (5%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +I + E ++ + +L++ E+ Y + VGL Sbjct: 195 LRDEAIHGVYVGLLAQEIYNKQTEEKKAELREFAIDLLNQLYENELEYTEDLY--DQVGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118 + ++++++ AN+ +G +P F+ + NP + ++ K + +FF + Y++ Sbjct: 253 S-HDVKKFIRYNANKALMNLGFDPYFEEEDINPI--VLNGLNTKTKSHDFFSMKGNGYKK 309 Query: 119 GAE 121 Sbjct: 310 ATV 312 >gi|219681363|ref|YP_002456127.1| putative ribonucleoside diphosphate reductase beta chain [Erwinia phage phiEa21-4] gi|327198492|ref|YP_004327080.1| ribonucleoside diphosphate reductase beta chain [Erwinia phage phiEa104] gi|199580630|gb|ACH89017.1| putative ribonucleoside diphosphate reductase beta chain [Erwinia phage phiEa21-4] gi|311875188|emb|CBX44448.1| ribonucleoside diphosphate reductase beta chain [Erwinia phage phiEa104] Length = 365 Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 56/131 (42%), Gaps = 11/131 (8%) Query: 3 DESLH--LNFGIDVINQIKIENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETM--PKG 56 DE LH ++F I +++P + + + + +L E E +A + Sbjct: 229 DEILHSKMDFAAL---DILLKDPVWFQSYQNCKGDVQRILDEVMENESNWADYIFSEGRS 285 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114 VGLN ++++ + A + L+ + +NP P+M + +++ ++N E + Sbjct: 286 VVGLNPTLLKEWVYYSAKPLYDFLNLDYNYPVVVKNPLPYMDKWMNIDSQQNANQEQDNS 345 Query: 115 EYQQGAELKWD 125 +Y + D Sbjct: 346 QYLLNTMVNDD 356 >gi|46401830|ref|YP_006922.1| putative aerobic ribonucleoside diphosphate reductase, small subunit [Enterobacteria phage T5] gi|45775008|gb|AAS77140.1| putative aerobic ribonucleoside diphosphate reductase, small subunit [Enterobacteria phage T5] gi|51512032|gb|AAU05231.1| ribonucleotide reductase beta subunit [Enterobacteria phage T5] gi|59897231|gb|AAX12026.1| ribonucleoside diphosphate reductase I beta chain [Enterobacteria phage T5] Length = 381 Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 4/104 (3%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVGLN 61 DE+LH +I + + E K+ L + EI + H + +GLN Sbjct: 238 DEALHTQMSKAIIQIMFQQFDKDLVDEAVAKAPAQLLKTLKTEIEWGHFIFKGRSLIGLN 297 Query: 62 APSCEQYMQFIANRRCHQIGLE---PLFKYTENPFPWMSEVIDL 102 A E+Y+ F+ IG+E L T+NP PW+ +D Sbjct: 298 AELLEEYLYFVGRNAFMHIGVEWPSHLPVITKNPIPWIMNWLDT 341 >gi|308173699|ref|YP_003920404.1| ribonucleoside-diphosphate reductase minor subunit [Bacillus amyloliquefaciens DSM 7] gi|307606563|emb|CBI42934.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus amyloliquefaciens DSM 7] gi|328553367|gb|AEB23859.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus amyloliquefaciens TA208] gi|328911843|gb|AEB63439.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus amyloliquefaciens LL3] Length = 329 Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 57/123 (46%), Gaps = 7/123 (5%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +I + E ++ + +L E E+ Y + VGL Sbjct: 195 LRDEAIHGVYVGLLAQEIYNKQTEAKKAELREFAIELLEELYHNELEYTEDLY--DQVGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118 + ++++++ AN+ +G +P F+ + NP + ++ K + +FF + Y++ Sbjct: 253 S-HDVKKFIRYNANKALMNLGFDPYFEEEDINPI--VLNGLNTKTKSHDFFSMKGNGYKK 309 Query: 119 GAE 121 Sbjct: 310 ATV 312 >gi|228957728|ref|ZP_04119472.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus thuringiensis serovar pakistani str. T13001] gi|228801971|gb|EEM48844.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus thuringiensis serovar pakistani str. T13001] Length = 133 Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 5/124 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 ++DES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 3 VKDESIHGVFVGILAQQIFAELSTEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 60 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +++++ AN+ +GLEP F+ E NP ++ + K +FF + Y + Sbjct: 61 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 118 Query: 120 AELK 123 ++ Sbjct: 119 TNVE 122 >gi|149277655|ref|ZP_01883795.1| ribonucleotide-diphosphate [Pedobacter sp. BAL39] gi|149231343|gb|EDM36722.1| ribonucleotide-diphosphate [Pedobacter sp. BAL39] Length = 327 Score = 56.2 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 17/123 (13%) Query: 3 DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58 DES+H F DV ++ NP + + K +L E E+ Y E + V Sbjct: 197 DESIHGVFVGLLAQDVYKKLP--NPE----KCKAKLEALLMELYENELKYTDELYTE--V 248 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEY 116 GL A ++Y+++ AN+ +G E LF+ N + ++++ + +FF + T Y Sbjct: 249 GLTAE-VKEYVRYNANKAMMNLGFEELFEVKPINAI--VLNGLNVETTQHDFFSKKSTNY 305 Query: 117 QQG 119 ++ Sbjct: 306 EKS 308 >gi|307244651|ref|ZP_07526755.1| ribonucleoside-diphosphate reductase, beta subunit [Peptostreptococcus stomatis DSM 17678] gi|306492032|gb|EFM64081.1| ribonucleoside-diphosphate reductase, beta subunit [Peptostreptococcus stomatis DSM 17678] Length = 328 Score = 56.2 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 7/121 (5%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH + + + E + E ++K ++L E E Y + Sbjct: 201 LRDESLHGKYIGLLAQEKFNEFHYDDKNELKEKVYSLLKELMENEEKYTKLLYEGSGL-- 258 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118 ++++ AN +G E +K N + + + + +FF T+ YQ+ Sbjct: 259 -EEQVINFLKYNANTALTNMGFEEFYKVEPVNAI--VLNGLSTETKTHDFFSTKGNGYQK 315 Query: 119 G 119 G Sbjct: 316 G 316 >gi|206968346|ref|ZP_03229302.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus AH1134] gi|228951834|ref|ZP_04113932.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229069005|ref|ZP_04202298.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus F65185] gi|206737266|gb|EDZ54413.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus AH1134] gi|228714117|gb|EEL65999.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus F65185] gi|228807757|gb|EEM54278.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 133 Score = 56.2 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 5/124 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 ++DES+H F + QI E +E Q++++ +L E +E+AY E +GL Sbjct: 3 VKDESIHGVFVGILAQQIFAELSVEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 60 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 +++++ AN+ +GLEP F+ E NP ++ + K +FF + Y + Sbjct: 61 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 118 Query: 120 AELK 123 ++ Sbjct: 119 TNVE 122 >gi|56964873|ref|YP_176604.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus clausii KSM-K16] gi|56911116|dbj|BAD65643.1| ribonucleoside-diphosphate reductase beta chain [Bacillus clausii KSM-K16] Length = 334 Score = 56.2 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 57/123 (46%), Gaps = 7/123 (5%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +I + KE Q + +L E E+ Y + VGL Sbjct: 195 LRDEAIHGVYIGLLAQEIYNKQSPDTQKELHQFAIELLDELYKNELLYTEDLY--DQVGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118 + ++++++ AN+ +G +P F+ + NP + ++ K + +FF + Y++ Sbjct: 253 S-HDVKKFIRYNANKALMNLGFDPYFEDEDINPI--VLNGLNTKTKSHDFFSMKGNGYKK 309 Query: 119 GAE 121 Sbjct: 310 ATV 312 >gi|329767978|ref|ZP_08259489.1| ribonucleoside-diphosphate reductase [Gemella haemolysans M341] gi|328838463|gb|EGF88071.1| ribonucleoside-diphosphate reductase [Gemella haemolysans M341] Length = 322 Score = 56.2 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 15/123 (12%) Query: 3 DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58 DE++H +F ++ + E KE +L + E+ Y + + Sbjct: 195 DETIHGSFTGFDAQELFKTLTPEEQERAEKEM----YKLLLDLYENELKYTKDIY--DEI 248 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEY 116 GL + Y+++ ANR +G F+ E NP + ++ + +FF + Y Sbjct: 249 GL-YEDVKDYVEYNANRALANLGYPGYFEDKEINPI--IENAMNTNTKNHDFFSVKGDGY 305 Query: 117 QQG 119 Sbjct: 306 VVS 308 >gi|9630287|ref|NP_046714.1| hypothetical protein SPBc2p162 [Bacillus phage SPBc2] gi|50812253|ref|NP_389886.2| ribonucleotide-diphosphate reductase subunit beta [Bacillus subtilis subsp. subtilis str. 168] gi|75090792|sp|O64174|BNRDF_BPSPC RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit gi|81637506|sp|O30601|YOSP_BACSU RecName: Full=SPBc2 prophage-derived ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit gi|2522310|gb|AAB92486.1| YojQ/S [Bacillus subtilis subsp. subtilis str. 168] gi|3025640|gb|AAC13135.1| unknown [Bacillus phage SPbeta] gi|32468776|emb|CAB13896.2| SPbeta phage ribonucleoside-diphosphate reductase, beta subunit [Bacillus subtilis subsp. subtilis str. 168] Length = 329 Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 58/123 (47%), Gaps = 7/123 (5%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +I + KE + +L E E+ Y + VGL Sbjct: 195 IRDEAIHGVYVGLLAQEIYKKQTPQKQKELYAWALNLLQELYENELEYTEDVY--DQVGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118 AP ++++++ AN+ + +G + F+ + NP + ++ K + +FF T+ Y++ Sbjct: 253 -APDVKKFIRYNANKALNNLGFDHWFEEEDVNPI--VINGLNTKTKSHDFFSTKGNGYKK 309 Query: 119 GAE 121 Sbjct: 310 ATV 312 >gi|182682906|ref|YP_001837030.1| putative aerobic ribonucleoside diphosphate reductase, small subunit [Enterobacteria phage EPS7] gi|182630618|gb|ACB97550.1| putative aerobic ribonucleoside diphosphate reductase, small subunit [Enterobacteria phage EPS7] Length = 381 Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 12/108 (11%) Query: 3 DESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGF 57 DE+LH + Q + L + + +L EI + H + Sbjct: 238 DEALHTQMSKAIIQIMFQQFDKD---LVDEALAKAPTQLLKT-LKTEIEWGHFIFKGRSL 293 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLE---PLFKYTENPFPWMSEVIDL 102 +GLNA E+Y+ F+ IG+E L T+NP PW+ +D Sbjct: 294 IGLNAELLEEYLYFVGRNAFMHIGVEWPSHLPVITKNPIPWIMNWLDT 341 >gi|27357032|gb|AAN86693.1| ribonucleotide reductase small subunit [Red sea bream iridovirus] Length = 48 Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 26/48 (54%) Query: 25 LWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFI 72 + K Q + ++ +A +E A+ E + +G+N+ S + Y+QF+ Sbjct: 1 MANKPCQDDAHEIISDAVDIETAFFREALKTPLLGMNSDSMKLYIQFV 48 >gi|13095637|ref|NP_076552.1| ribonucleotide reductase small subunit [Bovine herpesvirus 4] gi|12802587|gb|AAK07979.1|AF318573_59 ribonucleotide reductase small subunit [Bovine herpesvirus 4] Length = 305 Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 43/129 (33%), Gaps = 18/129 (13%) Query: 2 RDESLHLNFGIDVINQIK--IENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59 RDE LH + N + + PH+ + EA +E + G Sbjct: 189 RDELLHTRAAALLYNTMVSGADKPHML------WVHNLFKEAVEVEHEFI-LVKSSGVSA 241 Query: 60 LNAPSCEQYMQFIANRRCHQIGL---EPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 +N +++ A+R I L + P K NFFE ++Y Sbjct: 242 VNVDDIRSFLEATADRILKSINLPPIYGTPPPPKCPL----VYTGCVKNVNFFERDNSDY 297 Query: 117 QQGAELKWD 125 + +K D Sbjct: 298 T--SSIKDD 304 >gi|300870141|ref|YP_003785012.1| ribonucleotide-diphosphate reductase subunit beta [Brachyspira pilosicoli 95/1000] gi|300687840|gb|ADK30511.1| ribonucleotide-diphosphate reductase beta subunit [Brachyspira pilosicoli 95/1000] Length = 359 Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 11/133 (8%) Query: 3 DE-SLHLNFGIDVINQIKIENPHLWTKEFQ-----QKSRTMLHEATLLEIAYAHETM-PK 55 DE + H+ G +VI ++ + + + F ++ M EI +A K Sbjct: 227 DELNTHVPTGKNVIGILRKDANQGFKELFDSGWYNDMAKEMTEFTVNEEIKWAKYLFDGK 286 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKE-KNFFETR 112 G+N+ E ++++ A R +G+E + + + W + D+ K+ ET Sbjct: 287 EVSGINSSVSEHFIKYWAGVRLKDLGVETEYLKEPKSDIIDWFNAYRDINKQNAALQETT 346 Query: 113 VTEYQQGAELKWD 125 T YQ+ LK D Sbjct: 347 NTSYQK-GALKND 358 >gi|293374706|ref|ZP_06621014.1| ribonucleoside-diphosphate reductase, beta subunit [Turicibacter sanguinis PC909] gi|325840602|ref|ZP_08167083.1| ribonucleoside-diphosphate reductase, beta subunit [Turicibacter sp. HGF1] gi|292646620|gb|EFF64622.1| ribonucleoside-diphosphate reductase, beta subunit [Turicibacter sanguinis PC909] gi|325490251|gb|EGC92584.1| ribonucleoside-diphosphate reductase, beta subunit [Turicibacter sp. HGF1] Length = 321 Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 53/131 (40%), Gaps = 17/131 (12%) Query: 1 MRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56 +RDE LH F +++ E + +Q++ M+ E +E+ Y+ Sbjct: 191 LRDEKLHTVGVGFFAQQLLS----EFDESIQAKLKQQAVEMMQEIYEVEVEYSKVLYEN- 245 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETR 112 + + Y+Q+ N + L PLF E NP + I + + +FF T+ Sbjct: 246 -LDM-IDDVVSYIQYNVNYALQCLNLNPLFDIVESDINPI--VLNGISTETKNHDFFSTK 301 Query: 113 VTEYQQGAELK 123 Y + +++ Sbjct: 302 GNGYIKTTKVE 312 >gi|45259565|dbj|BAD12265.1| p53-inducible ribonucleotide reductase small subunit 2 short form beta [Homo sapiens] Length = 66 Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 2/46 (4%) Query: 77 CHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122 + + +F+ ENPF +M E I L+ + NFFE RV+EYQ+ A + Sbjct: 9 AAGLDQDEVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFAVM 52 >gi|296127719|ref|YP_003634971.1| ribonucleotide reductase [Brachyspira murdochii DSM 12563] gi|296019535|gb|ADG72772.1| ribonucleotide reductase [Brachyspira murdochii DSM 12563] Length = 357 Score = 55.4 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 11/133 (8%) Query: 3 DE-SLHLNFGIDVINQIKIENPHLWTKEFQ-----QKSRTMLHEATLLEIAYAHETM-PK 55 DE ++H+ G +++ ++ E ++ F+ +R M EI +A K Sbjct: 225 DELNVHVPTGKNLMTILRKEAHQGFSHLFKNGWFYDTARAMTEYTVNEEIKWAKYLFDGK 284 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENP--FPWMSEVIDLKKE-KNFFETR 112 G+N+ E ++++ A R I +E + + W + D+ K+ ET Sbjct: 285 EVSGINSSVSEHFIKYWAGIRLKDIDVETEYLSEKKSDIIDWFNSYRDINKQNAALQETT 344 Query: 113 VTEYQQGAELKWD 125 T YQ+ LK D Sbjct: 345 NTSYQK-GALKND 356 >gi|9629622|ref|NP_044898.1| ribonucleotide reductase subunit 2 [Murid herpesvirus 4] gi|6625623|gb|AAF19324.1|AF105037_56 60 [murid herpesvirus 4] gi|1850859|emb|CAA70275.1| ribonucleotide reductase, small subunit [Murid herpesvirus 4] gi|2317992|gb|AAB66450.1| ribonucleotide reductase small [murid herpesvirus 4] Length = 305 Score = 55.4 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 42/121 (34%), Gaps = 16/121 (13%) Query: 3 DESLHLNFGIDVINQIK--IENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 DE LH + N + E P + + EA +E ++ K + Sbjct: 190 DELLHTRAAAVLYNSLIPAKERPD------AAWIKRLFQEAVEVEYSFIA-AKSKNVTLV 242 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 ++++Q +R IG+EP++ P K NFFE T+Y Sbjct: 243 VPGEIKKFLQATCDRILQSIGVEPIYGSHAPVTCPLS----YNGCIKSVNFFEREGTDYS 298 Query: 118 Q 118 Sbjct: 299 T 299 >gi|68068657|ref|XP_676239.1| ribonucleotide reductase small subunit [Plasmodium berghei strain ANKA] gi|56495842|emb|CAH97095.1| ribonucleotide reductase small subunit, putative [Plasmodium berghei] Length = 299 Score = 55.4 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 37/94 (39%), Gaps = 8/94 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE L +F + N HL K + A LE + + + F+ + Sbjct: 179 RDEYLQGDFSVMCCN-------HLNNKLKYESVLYYFKSAVELEYNFCVDMLDFNFLKIT 231 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 95 +Q++Q++A+ + F ++ PF W Sbjct: 232 KEQVKQFLQYLADTMLLNLKYPKHFN-SKYPFTW 264 >gi|154508355|ref|ZP_02043997.1| hypothetical protein ACTODO_00852 [Actinomyces odontolyticus ATCC 17982] gi|153797989|gb|EDN80409.1| hypothetical protein ACTODO_00852 [Actinomyces odontolyticus ATCC 17982] Length = 425 Score = 55.4 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 52/135 (38%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + E+ + + + ++L+E E Y + +GL Sbjct: 295 IRDEAVHGYYIGYKYQLAVNESSQERQDDLRDYTYSLLYELYENEEQYTEDLY--DPLGL 352 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF NP +S D +FF + Sbjct: 353 T-EDVKKFLRYNANKALMNLGYEALFPADATDVNPAILAALSPNADENH--DFFSGSGSS 409 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 410 YVMGEVVDTEDEDWD 424 >gi|289423472|ref|ZP_06425274.1| ribonucleoside-diphosphate reductase, beta subunit [Peptostreptococcus anaerobius 653-L] gi|289156106|gb|EFD04769.1| ribonucleoside-diphosphate reductase, beta subunit [Peptostreptococcus anaerobius 653-L] Length = 337 Score = 55.0 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 47/121 (38%), Gaps = 7/121 (5%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDESLH + + + E + E + +L E E Y +GL Sbjct: 207 LRDESLHGKYIGLLAQEKLREFSYDDRNELKDAVYRLLKELMENEEKYTRMLYEG--LGL 264 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118 ++++ AN +G E +K N + + + + +FF T+ YQ+ Sbjct: 265 -EDQVINFLRYNANSALVNLGFEEFYKVEPVNAI--VLNGLSTETKTHDFFSTKGNGYQK 321 Query: 119 G 119 G Sbjct: 322 G 322 >gi|323495950|ref|ZP_08101016.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio sinaloensis DSM 21326] gi|323318985|gb|EGA71930.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio sinaloensis DSM 21326] Length = 323 Score = 55.0 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 51/134 (38%), Gaps = 13/134 (9%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + E + + ++ +++ +E Y VGL Sbjct: 193 IRDEAIHGYYIGYKFQLAFNELSEQEQAKVKDEAYSLMFSLYEIESQYTESLY--DQVGL 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVI-DLKKEKNFFETRVTEY 116 + ++ + AN+ +G EPLF NP M+ + + + +FF + Y Sbjct: 251 T-EDVKHFLHYNANKALMNLGFEPLFPDELCQVNPAI-MAALSPNADENHDFFSGSGSSY 308 Query: 117 QQGAEL-----KWD 125 G + WD Sbjct: 309 VIGKAVATEDEDWD 322 >gi|326632980|ref|YP_004306569.1| putative aerobic ribonucleoside diphosphate reductase small subunit [Enterobacteria phage SPC35] gi|321272174|gb|ADW80066.1| putative aerobic ribonucleoside diphosphate reductase small subunit [Enterobacteria phage SPC35] Length = 381 Score = 54.7 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 4/104 (3%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVGLN 61 DE+LH +I + + E K+ L + EI + H + +GLN Sbjct: 238 DEALHTQMSKAIIQIMFQQFDKDLVNEAVAKAPAQLLKTLKTEIEWGHFIFKGRSLIGLN 297 Query: 62 APSCEQYMQFIANRRCHQIGLE---PLFKYTENPFPWMSEVIDL 102 A E+Y+ F+ IG++ L T+NP PW+ +D Sbjct: 298 AELLEEYLYFVGRNAFMHIGVKWPSHLPVITKNPIPWIMNWLDT 341 >gi|326536370|ref|YP_004300811.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage 133] gi|299483451|gb|ADJ19545.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage 133] Length = 382 Score = 54.3 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 43/107 (40%), Gaps = 6/107 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LH ++ Q+ +E ++++ M E E A+A G Sbjct: 235 RDENLHHQGTRYILQQMNKGIDGTEWREIALDCKEEAEAMFLEVRAQERAWATYVYRNGH 294 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDL 102 GL +++ + +GL P+ + +P PW+++ + Sbjct: 295 PDGLTTDLVHEFIDYQLVPAMKNVGLNCPIERPKRHPLPWVNKYLMA 341 >gi|262285102|gb|ACY41130.1| ribonucleotide reductase subunit 2 [Wood mouse herpesvirus] Length = 305 Score = 54.3 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 16/121 (13%) Query: 3 DESLHLNFGIDVINQIK--IENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 DE LH + N + E P + + EA +E A+ K + Sbjct: 190 DELLHTRAAAVLYNTLIPAKERPD------PAWIKRLFQEAVEVEYAFIA-AKSKNVTLV 242 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 ++++Q +R IG+ L+ P K NFFE T+Y Sbjct: 243 VPGEIKRFLQATCDRILQSIGVGALYGSHAPVTCPLS----YNGCIKSVNFFEREGTDYS 298 Query: 118 Q 118 Sbjct: 299 T 299 >gi|289705575|ref|ZP_06501967.1| ribonucleoside-diphosphate reductase, beta subunit [Micrococcus luteus SK58] gi|289557804|gb|EFD51103.1| ribonucleoside-diphosphate reductase, beta subunit [Micrococcus luteus SK58] Length = 323 Score = 54.3 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 11/133 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + P +E + + +L E E+ Y H+ VGL Sbjct: 193 IRDEAVHGYYIGYKYQRSIETLPEEKREELKAFTFELLFELYENEVEYTHDLY--DAVGL 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKN--FFETRVTEYQ 117 A ++++ + AN+ +G EP+F T N P + + ++N FF + Y Sbjct: 251 -AEDVKKFLHYNANKALMNLGYEPMFPAETTNVNPAILSALSPNSDENHDFFSGSGSSYV 309 Query: 118 QGAE-----LKWD 125 G WD Sbjct: 310 IGKAENTEDEDWD 322 >gi|241888586|ref|ZP_04775893.1| ribonucleoside-diphosphate reductase, beta subunit [Gemella haemolysans ATCC 10379] gi|241864609|gb|EER68984.1| ribonucleoside-diphosphate reductase, beta subunit [Gemella haemolysans ATCC 10379] Length = 322 Score = 54.3 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 48/123 (39%), Gaps = 15/123 (12%) Query: 3 DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58 DE++H +F +V + E KE +L + E+ Y + + + Sbjct: 195 DETIHGSFTGFDAQEVFKTLTAEEQERAEKEM----YKLLLDLYENELVYTKDIYSE--I 248 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEY 116 GL + Y+++ ANR +G F+ E NP + ++ + +FF + Y Sbjct: 249 GL-YEEVKDYVEYNANRALANLGYPGYFEDKEINPI--IENAMNTNTKNHDFFSVKGDGY 305 Query: 117 QQG 119 Sbjct: 306 VVS 308 >gi|239917558|ref|YP_002957116.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Micrococcus luteus NCTC 2665] gi|281413955|ref|ZP_06245697.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Micrococcus luteus NCTC 2665] gi|239838765|gb|ACS30562.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Micrococcus luteus NCTC 2665] Length = 323 Score = 54.3 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 11/133 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + P +E + + +L E E+ Y H+ VGL Sbjct: 193 IRDEAVHGYYIGYKYQRSIETLPEEKREELKAFTFELLFELYENEVEYTHDLY--DAVGL 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKN--FFETRVTEYQ 117 A ++++ + AN+ +G EP+F T N P + + ++N FF + Y Sbjct: 251 -AEDVKKFLHYNANKALMNLGYEPMFPAETTNVNPAILSALSPNSDENHDFFSGSGSSYV 309 Query: 118 QGAE-----LKWD 125 G WD Sbjct: 310 IGKAENTEDEDWD 322 >gi|242069239|ref|XP_002449896.1| hypothetical protein SORBIDRAFT_05g025245 [Sorghum bicolor] gi|241935739|gb|EES08884.1| hypothetical protein SORBIDRAFT_05g025245 [Sorghum bicolor] Length = 79 Score = 54.3 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Query: 55 KGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE 105 V +N QY+ FIA+ + + ++ NPF WM E+I L+ + Sbjct: 27 NALVRMNGRLMSQYIGFIADYLLMALEHKKMYDVA-NPFDWM-ELISLQGK 75 >gi|254505962|ref|ZP_05118107.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio parahaemolyticus 16] gi|219551185|gb|EED28165.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio parahaemolyticus 16] Length = 323 Score = 53.9 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 51/134 (38%), Gaps = 13/134 (9%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + E + + ++ +++ +E Y VGL Sbjct: 193 IRDEAIHGYYIGYKFQLAFNELSQQEQAKVKDEAYSLMFSLYEIESQYTESLY--DQVGL 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVI-DLKKEKNFFETRVTEY 116 + ++ + AN+ +G EPLF NP M+ + + + +FF + Y Sbjct: 251 T-EDVKHFLHYNANKALMNLGFEPLFPDELCQVNPAI-MAALSPNADENHDFFSGSGSSY 308 Query: 117 QQGAEL-----KWD 125 G + WD Sbjct: 309 VIGKAVATEDEDWD 322 >gi|315605404|ref|ZP_07880447.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces sp. oral taxon 180 str. F0310] gi|315312973|gb|EFU61047.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces sp. oral taxon 180 str. F0310] Length = 329 Score = 53.9 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 54/133 (40%), Gaps = 11/133 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + E+ + + + ++L+E E Y + +GL Sbjct: 199 IRDEAVHGYYIGYKYQLAVNESSQERQDDLRDYTYSLLYELYENEEQYTEDLY--DPLGL 256 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKN--FFETRVTEYQ 117 ++++++ AN+ +G E LF + N P + + ++N FF + Y Sbjct: 257 T-EDVKKFLRYNANKALMNLGYEALFPHDATNVNPAILAALSPNADENHDFFSGSGSSYV 315 Query: 118 QGAEL-----KWD 125 G + WD Sbjct: 316 MGEVVDTEDEDWD 328 >gi|169630485|ref|YP_001704134.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium abscessus ATCC 19977] gi|169242452|emb|CAM63480.1| Probable ribonucleoside-diphosphate reductase beta subunit [Mycobacterium abscessus] Length = 324 Score = 53.5 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + E ++ + +L+E E Y + VGL Sbjct: 194 IRDEAVHGYYIGYKFQRGLERVDEAKRAEIKEYTYDLLYELYENETDYTEDLY--DEVGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF E NP +S D +FF + Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPREETDVNPAILSALSPNADENH--DFFSGSGSS 308 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 309 YVIGKAVNTEDEDWD 323 >gi|312883652|ref|ZP_07743377.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio caribbenthicus ATCC BAA-2122] gi|309368875|gb|EFP96402.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio caribbenthicus ATCC BAA-2122] Length = 323 Score = 53.5 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 49/135 (36%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + E ++ + K+ ++L +E Y VGL Sbjct: 193 IRDEAIHGYYIGYKFQLGYQELDEARQEQLKDKAYSLLLSLYDIECQYTESLY--DQVGL 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++ + AN+ +G E LF NP +S D +FF + Sbjct: 251 T-EDVKHFLHYNANKALMNLGFEALFPQELCNVNPAIMAALSPNSDENH--DFFSGSGSS 307 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 308 YVIGKAVVTEDEDWD 322 >gi|156843271|ref|XP_001644704.1| hypothetical protein Kpol_1056p47 [Vanderwaltozyma polyspora DSM 70294] gi|156115352|gb|EDO16846.1| hypothetical protein Kpol_1056p47 [Vanderwaltozyma polyspora DSM 70294] Length = 361 Score = 53.5 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 37/95 (38%), Gaps = 9/95 (9%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIA-YAHETMPKGFVG 59 ++D +H +F + + +++K ++ EA +E+ + K Sbjct: 233 LKDHIVHCDFQMSIYSELKKRLD-------PGIIERIVTEAVEIELETLEDDYFNKQLDK 285 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP 94 + ++++ +R G + F ++ NP+ Sbjct: 286 ETKADIKNVIEYVGDRVLMGFGNQKHF-HSANPYD 319 >gi|157692410|ref|YP_001486872.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus pumilus SAFR-032] gi|194015081|ref|ZP_03053698.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus pumilus ATCC 7061] gi|157681168|gb|ABV62312.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus pumilus SAFR-032] gi|194014107|gb|EDW23672.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus pumilus ATCC 7061] Length = 326 Score = 53.5 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 58/129 (44%), Gaps = 9/129 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +I + KE S +L+E E+ Y + + + Sbjct: 195 LRDEAIHGVYVGLLAQEIYNKQTPDVQKELYDFSIDLLNELYENELHYTEDIYDQVNL-- 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118 + ++++++ AN+ +G P F+ E NP + ++ K + +FF + Y++ Sbjct: 253 -SHDVKKFIRYNANKALMNLGFAPYFEEEEINPI--VLNGLNTKTKSHDFFSMKGNGYKK 309 Query: 119 GAE--LKWD 125 LK D Sbjct: 310 ATVEPLKDD 318 >gi|120403054|ref|YP_952883.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium vanbaalenii PYR-1] gi|119955872|gb|ABM12877.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Mycobacterium vanbaalenii PYR-1] Length = 324 Score = 53.5 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E+ Y + VGL Sbjct: 194 IRDEAVHGYYIGYKFQKGLALESEATRQELKDYTYELLFELYDNEVEYTQDLY--DEVGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF E NP +S D +FF + Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 308 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 309 YVIGKAVNTEDEDWD 323 >gi|37525251|ref|NP_928595.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784678|emb|CAE13578.1| ribonucleoside-diphosphate reductase 2 beta chain (ribonucleotide reductase 2) (R2f protein) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 319 Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 6/126 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + Q ++ L KE ++ + ++L E EI Y E VG Sbjct: 189 IRDEAIHGYYIGYKFQQSLKKHSTLEQKEIKEFTFSLLLELYENEIKYTEELY--DIVGW 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVI--DLKKEKNFFETRVTEYQ 117 ++++ + AN+ +G E LF N P + + + + +FF + Y Sbjct: 247 T-EDIKKFLHYNANKALMNLGYETLFPPEITNVSPTILSALSPNANENHDFFSGSGSSYV 305 Query: 118 QGAELK 123 G + Sbjct: 306 IGKAVN 311 >gi|319645694|ref|ZP_07999925.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus sp. BT1B_CT2] gi|317392241|gb|EFV73037.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus sp. BT1B_CT2] Length = 330 Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 57/129 (44%), Gaps = 9/129 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +I + + + +++ E EIAY E VGL Sbjct: 198 IRDEAIHGVYVGLLAQEIYNKKDEGTQHRLEMFALSLIEELYRNEIAYTEELY--DQVGL 255 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118 ++++++ N+ +G P F+ E NP + ++ K + +FF + Y++ Sbjct: 256 T-HDVKKFIRYNGNKALSNLGFNPYFEEEEINPI--VLNGLNTKTKSHDFFSMKGNGYKK 312 Query: 119 GAE--LKWD 125 LK D Sbjct: 313 ATVEPLKDD 321 >gi|291295355|ref|YP_003506753.1| ribonucleoside-diphosphate reductase [Meiothermus ruber DSM 1279] gi|290470314|gb|ADD27733.1| Ribonucleoside-diphosphate reductase [Meiothermus ruber DSM 1279] Length = 429 Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 13/125 (10%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + + ++ P K ++ +ML LE Y+ M +GL Sbjct: 195 IRDESIHGVYVGLLAQEVYAGLPEAQQKTAREGVYSMLEHLAGLEERYSR--MLYTPLGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK---NFFETRVT 114 + + ++ A++ +GLEP F + NP + L +FF T+ Sbjct: 253 T-EAVVTFSRYNADKALMNLGLEPYFGVSAEAVNP----VVLAGLSTHTKNHDFFSTKGN 307 Query: 115 EYQQG 119 Y + Sbjct: 308 GYVKA 312 >gi|319408170|emb|CBI81823.1| ribonucleoside-diphosphate reductase beta chain [Bartonella schoenbuchensis R1] Length = 324 Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 48/132 (36%), Gaps = 12/132 (9%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + ML + +E Y + +GL Sbjct: 194 IRDEAVHGYYVGYKFQLGFAKLDEAKKQEIKDFAFNMLFDLYSIECKYTEDLY--DAIGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 252 T-EDVKVFIHYNANKALMNLGFEPLFPPEVCRVNPAILAALSPNSDENH--DFFSGSGSS 308 Query: 116 YQ--QGAELKWD 125 Y + D Sbjct: 309 YVIGKAVATTDD 320 >gi|326333061|ref|ZP_08199312.1| ribonucleoside-diphosphate reductase, beta subunit [Nocardioidaceae bacterium Broad-1] gi|325949135|gb|EGD41224.1| ribonucleoside-diphosphate reductase, beta subunit [Nocardioidaceae bacterium Broad-1] Length = 334 Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 52/131 (39%), Gaps = 18/131 (13%) Query: 2 RDESLHLNFGIDVINQIKIEN-PHLWTKEFQQKSRTML------------HEATLLEIAY 48 RDE+LH G + N E + +F+ + + HEA ++E+ + Sbjct: 199 RDENLHATGGAWLFNTTLDEYAATVPADKFEAERDDLFARVRGVAEHLYAHEARIVEMLF 258 Query: 49 AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENP-FPWMSEVIDLKKEKN 107 AH G+ E +++ + + +EPLF NP W I+ + + Sbjct: 259 AH----GPITGIEQADLEAFVRSRIDMTLENMRMEPLFGVEPNPVAEWFYAGINGTQFHD 314 Query: 108 FFETRVTEYQQ 118 FF+ EY + Sbjct: 315 FFQVTGNEYNR 325 >gi|46255232|ref|YP_006144.1| ribonucleoside-diphosphate reductase beta chain [Thermus thermophilus HB27] gi|46198081|gb|AAS82491.1| ribonucleoside-diphosphate reductase beta chain [Thermus thermophilus HB27] Length = 324 Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 48/119 (40%), Gaps = 4/119 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL-NA 62 E++H FG++++ ++ E+P + FQ+++ + E A G L Sbjct: 195 ENVHGLFGVELLRLLRTEHPEALGEGFQEEALRLAQGLFRAEEALLDWLFSAGEPALVGH 254 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQQ 118 ++++ N+ GL P F E W + + KE +FF R Y + Sbjct: 255 RETLEFLKGRYNQVLALHGLPPPFPVDEKALRDTEWFTLELLADKEVDFFNKRSVAYAR 313 >gi|15827930|ref|NP_302193.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium leprae TN] gi|221230407|ref|YP_002503823.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium leprae Br4923] gi|14195114|sp|Q9CBQ2|RIR2_MYCLE RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit gi|13093483|emb|CAC30684.1| ribonucleotide reductase small subunit [Mycobacterium leprae] gi|219933514|emb|CAR71826.1| ribonucleotide reductase small subunit [Mycobacterium leprae Br4923] Length = 325 Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 54/135 (40%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + E ++ + +L E E+ Y + + VGL Sbjct: 195 IRDEAVHGYYIGYKFQRGLVLVDDARRAELKEYTYELLFELYDNEVEYTQDLYDR--VGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF E NP +S D +FF + Sbjct: 253 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 309 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 310 YVIGKAVVTEDEDWD 324 >gi|69245952|ref|ZP_00603724.1| Ribonucleoside-diphosphate reductase [Enterococcus faecium DO] gi|227552561|ref|ZP_03982610.1| Ribonucleoside-diphosphate reductase [Enterococcus faecium TX1330] gi|257880353|ref|ZP_05660006.1| ribonucleoside-diphosphate reductase [Enterococcus faecium 1,230,933] gi|257882206|ref|ZP_05661859.1| ribonucleoside-diphosphate reductase [Enterococcus faecium 1,231,502] gi|257885400|ref|ZP_05665053.1| ribonucleoside-diphosphate reductase [Enterococcus faecium 1,231,501] gi|257888211|ref|ZP_05667864.1| ribonucleoside-diphosphate reductase [Enterococcus faecium 1,141,733] gi|257891012|ref|ZP_05670665.1| ribonucleoside-diphosphate reductase [Enterococcus faecium 1,231,410] gi|257894265|ref|ZP_05673918.1| ribonucleoside-diphosphate reductase [Enterococcus faecium 1,231,408] gi|257896901|ref|ZP_05676554.1| ribonucleoside-diphosphate reductase [Enterococcus faecium Com12] gi|257899642|ref|ZP_05679295.1| ribonucleoside-diphosphate reductase [Enterococcus faecium Com15] gi|258614695|ref|ZP_05712465.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus faecium DO] gi|260562343|ref|ZP_05832857.1| ribonucleoside-diphosphate reductase [Enterococcus faecium C68] gi|261209282|ref|ZP_05923674.1| ribonucleoside-diphosphate reductase [Enterococcus faecium TC 6] gi|289567001|ref|ZP_06447402.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium D344SRF] gi|293378468|ref|ZP_06624631.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium PC4.1] gi|293553988|ref|ZP_06674590.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium E1039] gi|293563177|ref|ZP_06677635.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium E1162] gi|293568383|ref|ZP_06679704.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium E1071] gi|293570828|ref|ZP_06681875.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium E980] gi|294615274|ref|ZP_06695151.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium E1636] gi|294617336|ref|ZP_06696975.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium E1679] gi|294623134|ref|ZP_06702020.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium U0317] gi|314939361|ref|ZP_07846602.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium TX0133a04] gi|314941564|ref|ZP_07848449.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium TX0133C] gi|314949609|ref|ZP_07852933.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium TX0082] gi|314953716|ref|ZP_07856591.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium TX0133A] gi|314992172|ref|ZP_07857616.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium TX0133B] gi|314997663|ref|ZP_07862593.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium TX0133a01] gi|68195482|gb|EAN09926.1| Ribonucleoside-diphosphate reductase [Enterococcus faecium DO] gi|227178310|gb|EEI59282.1| Ribonucleoside-diphosphate reductase [Enterococcus faecium TX1330] gi|257814581|gb|EEV43339.1| ribonucleoside-diphosphate reductase [Enterococcus faecium 1,230,933] gi|257817864|gb|EEV45192.1| ribonucleoside-diphosphate reductase [Enterococcus faecium 1,231,502] gi|257821256|gb|EEV48386.1| ribonucleoside-diphosphate reductase [Enterococcus faecium 1,231,501] gi|257824265|gb|EEV51197.1| ribonucleoside-diphosphate reductase [Enterococcus faecium 1,141,733] gi|257827372|gb|EEV53998.1| ribonucleoside-diphosphate reductase [Enterococcus faecium 1,231,410] gi|257830644|gb|EEV57251.1| ribonucleoside-diphosphate reductase [Enterococcus faecium 1,231,408] gi|257833466|gb|EEV59887.1| ribonucleoside-diphosphate reductase [Enterococcus faecium Com12] gi|257837554|gb|EEV62628.1| ribonucleoside-diphosphate reductase [Enterococcus faecium Com15] gi|260073267|gb|EEW61608.1| ribonucleoside-diphosphate reductase [Enterococcus faecium C68] gi|260076828|gb|EEW64563.1| ribonucleoside-diphosphate reductase [Enterococcus faecium TC 6] gi|289161202|gb|EFD09101.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium D344SRF] gi|291588904|gb|EFF20731.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium E1071] gi|291591871|gb|EFF23503.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium E1636] gi|291596409|gb|EFF27663.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium E1679] gi|291597503|gb|EFF28668.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium U0317] gi|291601845|gb|EFF32095.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium E1039] gi|291604868|gb|EFF34344.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium E1162] gi|291609096|gb|EFF38371.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium E980] gi|292642797|gb|EFF60944.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium PC4.1] gi|313588298|gb|EFR67143.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium TX0133a01] gi|313593275|gb|EFR72120.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium TX0133B] gi|313594300|gb|EFR73145.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium TX0133A] gi|313599623|gb|EFR78466.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium TX0133C] gi|313641346|gb|EFS05926.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium TX0133a04] gi|313644033|gb|EFS08613.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium TX0082] Length = 321 Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P + + +L+E E Y E +G Sbjct: 189 IRDESVHGTYIGYKFQLGFNELPEAEQETLKDWMYNLLYELYENEERYTEELY--DPIGW 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G++PLF T NP M+ + +FF Sbjct: 247 T-EEVKTFLRYNANKALMNLGMDPLFPDTANDVNPIV-MNGISTGTSNHDFF 296 >gi|15842613|ref|NP_337650.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis CDC1551] gi|31794226|ref|NP_856719.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium bovis AF2122/97] gi|57117051|ref|YP_177921.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis H37Rv] gi|121638932|ref|YP_979156.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662901|ref|YP_001284424.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis H37Ra] gi|148824239|ref|YP_001288993.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis F11] gi|167969649|ref|ZP_02551926.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis H37Ra] gi|215405040|ref|ZP_03417221.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis 02_1987] gi|215412903|ref|ZP_03421607.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis 94_M4241A] gi|215428496|ref|ZP_03426415.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis T92] gi|215432000|ref|ZP_03429919.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis EAS054] gi|215447324|ref|ZP_03434076.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis T85] gi|218754813|ref|ZP_03533609.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis GM 1503] gi|219559083|ref|ZP_03538159.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis T17] gi|224991424|ref|YP_002646113.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium bovis BCG str. Tokyo 172] gi|253797854|ref|YP_003030855.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis KZN 1435] gi|254233678|ref|ZP_04927003.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2 [Mycobacterium tuberculosis C] gi|254365678|ref|ZP_04981723.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2 [Mycobacterium tuberculosis str. Haarlem] gi|254552123|ref|ZP_05142570.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260188080|ref|ZP_05765554.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis CPHL_A] gi|260202186|ref|ZP_05769677.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis T46] gi|260206381|ref|ZP_05773872.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis K85] gi|289444611|ref|ZP_06434355.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium tuberculosis T46] gi|289448726|ref|ZP_06438470.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis CPHL_A] gi|289553161|ref|ZP_06442371.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis KZN 605] gi|289571250|ref|ZP_06451477.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis T17] gi|289575758|ref|ZP_06455985.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis K85] gi|289746856|ref|ZP_06506234.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis 02_1987] gi|289751720|ref|ZP_06511098.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis T92] gi|289755164|ref|ZP_06514542.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis EAS054] gi|289759173|ref|ZP_06518551.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis T85] gi|289763226|ref|ZP_06522604.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2 [Mycobacterium tuberculosis GM 1503] gi|294993448|ref|ZP_06799139.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis 210] gi|297635679|ref|ZP_06953459.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis KZN 4207] gi|297732677|ref|ZP_06961795.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis KZN R506] gi|298526518|ref|ZP_07013927.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis 94_M4241A] gi|306777354|ref|ZP_07415691.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis SUMu001] gi|306781258|ref|ZP_07419595.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis SUMu002] gi|306785899|ref|ZP_07424221.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis SUMu003] gi|306790253|ref|ZP_07428575.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis SUMu004] gi|306794748|ref|ZP_07433050.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis SUMu005] gi|306798990|ref|ZP_07437292.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis SUMu006] gi|306804833|ref|ZP_07441501.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis SUMu008] gi|306809026|ref|ZP_07445694.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis SUMu007] gi|306969126|ref|ZP_07481787.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis SUMu009] gi|306973470|ref|ZP_07486131.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis SUMu010] gi|307081181|ref|ZP_07490351.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis SUMu011] gi|307085780|ref|ZP_07494893.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis SUMu012] gi|313660009|ref|ZP_07816889.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis KZN V2475] gi|81671996|sp|Q50549|RIR2B_MYCTU RecName: Full=Ribonucleoside-diphosphate reductase subunit beta nrdF2; AltName: Full=Ribonucleoside-diphosphate reductase nrdF2; AltName: Full=Ribonucleotide reductase R2-2 small subunit gi|1395209|gb|AAB81406.1| ribonucleotide reductase R2-2 small subunit [Mycobacterium tuberculosis] gi|13882928|gb|AAK47464.1| ribonucleoside-diphosphate reductase R2-2, beta subunit [Mycobacterium tuberculosis CDC1551] gi|31619821|emb|CAD96761.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF2 (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN) [Mycobacterium bovis AF2122/97] gi|41352780|emb|CAE55544.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF2 (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN) [Mycobacterium tuberculosis H37Rv] gi|121494580|emb|CAL73061.1| Ribonucleoside-diphosphate reductase (beta chain) nrdF2 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599207|gb|EAY58311.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2 [Mycobacterium tuberculosis C] gi|134151191|gb|EBA43236.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2 [Mycobacterium tuberculosis str. Haarlem] gi|148507053|gb|ABQ74862.1| ribonucleoside-diphosphate reductase subunit beta NrdF2 [Mycobacterium tuberculosis H37Ra] gi|148722766|gb|ABR07391.1| ribonucleoside-diphosphate reductase beta subunit nrdF2 [Mycobacterium tuberculosis F11] gi|224774539|dbj|BAH27345.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium bovis BCG str. Tokyo 172] gi|253319357|gb|ACT23960.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis KZN 1435] gi|289417530|gb|EFD14770.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium tuberculosis T46] gi|289421684|gb|EFD18885.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis CPHL_A] gi|289437793|gb|EFD20286.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis KZN 605] gi|289540189|gb|EFD44767.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis K85] gi|289545004|gb|EFD48652.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis T17] gi|289687384|gb|EFD54872.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis 02_1987] gi|289692307|gb|EFD59736.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis T92] gi|289695751|gb|EFD63180.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis EAS054] gi|289710732|gb|EFD74748.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2 [Mycobacterium tuberculosis GM 1503] gi|289714737|gb|EFD78749.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis T85] gi|298496312|gb|EFI31606.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis 94_M4241A] gi|308214246|gb|EFO73645.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis SUMu001] gi|308325901|gb|EFP14752.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis SUMu002] gi|308329423|gb|EFP18274.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis SUMu003] gi|308333268|gb|EFP22119.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis SUMu004] gi|308336923|gb|EFP25774.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis SUMu005] gi|308340739|gb|EFP29590.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis SUMu006] gi|308344606|gb|EFP33457.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis SUMu007] gi|308348554|gb|EFP37405.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis SUMu008] gi|308353280|gb|EFP42131.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis SUMu009] gi|308357113|gb|EFP45964.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis SUMu010] gi|308361065|gb|EFP49916.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis SUMu011] gi|308364701|gb|EFP53552.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis SUMu012] gi|323718280|gb|EGB27458.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis CDC1551A] gi|326902729|gb|EGE49662.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis W-148] gi|328457631|gb|AEB03054.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Mycobacterium tuberculosis KZN 4207] Length = 324 Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + E + + +L E E+ Y + VGL Sbjct: 194 IRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDLY--DEVGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF E NP +S D +FF + Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 308 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 309 YVIGKAVVTEDDDWD 323 >gi|54026269|ref|YP_120511.1| ribonucleotide-diphosphate reductase subunit beta [Nocardia farcinica IFM 10152] gi|54017777|dbj|BAD59147.1| putative ribonucleoside-diphosphate reductase beta subunit [Nocardia farcinica IFM 10152] Length = 320 Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L+E E+ Y + VGL Sbjct: 190 IRDEAVHGYYIGYKYQRGLEQVSEAEREELKNYTFELLYELYENEVEYTQDLY--DEVGL 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++++ AN+ +G E LF E NP +S D +FF + Sbjct: 248 T-EDVKTFLRYNANKALMNLGYEGLFPADETRVNPAILSALSPNADENH--DFFSGSGSS 304 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 305 YVIGKAVNTEDEDWD 319 >gi|163842202|ref|YP_001626607.1| ribonucleotide-diphosphate reductase subunit beta [Renibacterium salmoninarum ATCC 33209] gi|162955678|gb|ABY25193.1| ribonucleoside-diphosphate reductase beta chain [Renibacterium salmoninarum ATCC 33209] Length = 325 Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 55/135 (40%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L+E EI Y H+ VGL Sbjct: 195 IRDEAVHGYYIGYKFQKGLEKVSEERREEIKAYTFDLLYELYENEIQYTHDLY--DAVGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115 A ++++ + AN+ +G E +F T NP +S D +FF + Sbjct: 253 -AEDVKKFLHYNANKALMNLGYEAMFPSTVTDVNPAILSALSPNADENH--DFFSGSGSS 309 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 310 YVIGKAVNTEDEDWD 324 >gi|213585578|ref|ZP_03367404.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 189 Score = 52.3 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAH 50 RDE+LHL ++N ++ +++P + +E +Q+ + +A E +A Sbjct: 137 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWAD 189 >gi|183981661|ref|YP_001849952.1| ribonucleoside-diphosphate reductase (beta chain) NrdF2 [Mycobacterium marinum M] gi|183174987|gb|ACC40097.1| ribonucleoside-diphosphate reductase (beta chain) NrdF2 [Mycobacterium marinum M] Length = 324 Score = 52.3 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + E + + +L E E+ Y + VGL Sbjct: 194 IRDEAVHGYYIGYKFQRGLAAADEARRTELKDYTYELLFELYDNEVEYTQDLY--DEVGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF E NP +S D +FF + Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 308 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 309 YVIGKAVVTQDEDWD 323 >gi|118617484|ref|YP_905816.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium ulcerans Agy99] gi|118569594|gb|ABL04345.1| ribonucleoside-diphosphate reductase (beta chain) NrdF2 [Mycobacterium ulcerans Agy99] Length = 324 Score = 52.3 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + E + + +L E E+ Y + VGL Sbjct: 194 IRDEAVHGYYIGYKFQRGLAAADEARRTELKDYTYELLFELYDNEVEYTQDLY--DEVGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF E NP +S D +FF + Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 308 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 309 YVIGKAVATQDEDWD 323 >gi|294998842|gb|ADF58156.1| ribonucleoside-diphosphate reductase beta subunit [Pseudomonas phage JG004] Length = 348 Score = 52.3 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 4/111 (3%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQ--QKSRTMLHEATLLEIAYAHETMPKGFV-G 59 DE LH ++INQ E +++ + +K R + E +P G + G Sbjct: 210 DEDLHGVVSAEIINQYYAEIGRPLSEDTRRVEKIRQAIDHVYAHECRIVDMAIPGGELNG 269 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKNFF 109 +A + + ++++ N C ++GLE F+ + P W K +FF Sbjct: 270 ESAENYKAFVRYRLNVWCRRLGLEDHFENDDTPIKDWFEMNTYAYKMIDFF 320 >gi|326804460|ref|YP_004327264.1| ribonucleotide-diphosphate reductase beta subunit [Pseudomonas phage PAK_P1] gi|290873873|gb|ADD65076.1| ribonucleotide-diphosphate reductase beta subunit [Pseudomonas phage PAK_P1] Length = 348 Score = 52.3 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 4/111 (3%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQ--QKSRTMLHEATLLEIAYAHETMPKGFV-G 59 DE LH ++INQ E +++ + +K R + E +P G + G Sbjct: 210 DEDLHGVVSAEIINQYYAEIGRPLSEDTRRVEKIRQAIDHVYAHECRIVDMAIPGGELNG 269 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKNFF 109 +A + + ++++ N C ++GLE F+ + P W K +FF Sbjct: 270 ESAENYKAFVRYRLNVWCRRLGLEDHFENDDTPIKDWFEMNTYAYKMIDFF 320 >gi|226312721|ref|YP_002772615.1| ribonucleotide-diphosphate reductase subunit beta [Brevibacillus brevis NBRC 100599] gi|226095669|dbj|BAH44111.1| ribonucleoside-diphosphate reductase beta chain [Brevibacillus brevis NBRC 100599] Length = 316 Score = 52.3 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 15/124 (12%) Query: 1 MRDESLHL----NFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56 +RDES+H +V + + + ++ +LHE E AY + Sbjct: 188 VRDESIHGLYVGVLAQEVYQGLSV----VEQTAAIEELYALLHELQENEEAYTTSLYTE- 242 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVT 114 +GL A Y+++ AN+ +GL+PLF E NP + I + ++ +FF + Sbjct: 243 -IGL-ADEVHAYVRYNANKALMNLGLDPLFPEEEVNPI--VLNGIRTQTKQHDFFSKKGN 298 Query: 115 EYQQ 118 Y + Sbjct: 299 GYVR 302 >gi|257865182|ref|ZP_05644835.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus EC30] gi|257871507|ref|ZP_05651160.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus EC10] gi|257874804|ref|ZP_05654457.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus EC20] gi|325571550|ref|ZP_08147050.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus casseliflavus ATCC 12755] gi|257799116|gb|EEV28168.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus EC30] gi|257805671|gb|EEV34493.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus EC10] gi|257808970|gb|EEV37790.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus EC20] gi|325156026|gb|EGC68222.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus casseliflavus ATCC 12755] Length = 321 Score = 52.3 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ + +L+E E Y E +G Sbjct: 189 IRDESVHGTYIGYKFQLGFNELPEDEQQKLKDWMYDLLYELYENEERYTEELY--DEIGW 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 247 T-EEVKTFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 296 >gi|315149360|gb|EFT93376.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX0012] Length = 321 Score = 52.3 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P + + +L+E E Y E +G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQDKLKDWMYNLLYELYENEERYTEELYDD--LGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G++PLF T NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGMDPLFADTANDVNPIV-MNGISTGTSNHDFF 295 >gi|293193572|ref|ZP_06609842.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces odontolyticus F0309] gi|292819928|gb|EFF78930.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces odontolyticus F0309] Length = 320 Score = 52.3 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 53/135 (39%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + E+ + + + ++L+E E Y + +GL Sbjct: 190 IRDEAVHGYYIGYKYQLAVNESSQERQDDLRDYTYSLLYELYENEEQYTEDLY--DPLGL 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN--FFETRVTE 115 ++++++ AN+ +G E LF NP + + ++N FF + Sbjct: 248 T-EDVKKFLRYNANKALMNLGYEALFPADATDVNPA--ILAALSPNADENHDFFSGSGSS 304 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 305 YVMGEVVDTEDEDWD 319 >gi|254820788|ref|ZP_05225789.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium intracellulare ATCC 13950] Length = 324 Score = 52.3 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E+ Y + VGL Sbjct: 194 IRDEAVHGYYIGYKFQRGLALVDDARKQELKDYTYELLFELYDNEVEYTQDLY--DEVGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF E NP +S D +FF + Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 308 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 309 YVIGKAVVTEDEDWD 323 >gi|29375101|ref|NP_814254.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus faecalis V583] gi|227519132|ref|ZP_03949181.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus faecalis TX0104] gi|227553836|ref|ZP_03983885.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus faecalis HH22] gi|229547642|ref|ZP_04436367.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus faecalis TX1322] gi|229548395|ref|ZP_04437120.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus faecalis ATCC 29200] gi|255971023|ref|ZP_05421609.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T1] gi|255973536|ref|ZP_05424122.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T2] gi|256617388|ref|ZP_05474234.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis ATCC 4200] gi|256761391|ref|ZP_05501971.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T3] gi|256852443|ref|ZP_05557819.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus faecalis T8] gi|256957628|ref|ZP_05561799.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis DS5] gi|256959663|ref|ZP_05563834.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis Merz96] gi|256963238|ref|ZP_05567409.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis HIP11704] gi|257080134|ref|ZP_05574495.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis JH1] gi|257080866|ref|ZP_05575227.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis E1Sol] gi|257083550|ref|ZP_05577911.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis Fly1] gi|257085823|ref|ZP_05580184.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis D6] gi|257088966|ref|ZP_05583327.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis CH188] gi|257415187|ref|ZP_05592181.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis AR01/DG] gi|257418242|ref|ZP_05595236.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T11] gi|257420749|ref|ZP_05597739.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus faecalis X98] gi|293384855|ref|ZP_06630698.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis R712] gi|293389145|ref|ZP_06633612.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis S613] gi|294780704|ref|ZP_06746065.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis PC1.1] gi|300861776|ref|ZP_07107856.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TUSoD Ef11] gi|307272281|ref|ZP_07553541.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX0855] gi|307275556|ref|ZP_07556697.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX2134] gi|307282794|ref|ZP_07562994.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX0860] gi|307288831|ref|ZP_07568809.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX0109] gi|307290616|ref|ZP_07570524.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX0411] gi|312900212|ref|ZP_07759524.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX0470] gi|312904832|ref|ZP_07763972.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX0635] gi|312908153|ref|ZP_07767131.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis DAPTO 512] gi|312952106|ref|ZP_07770987.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX0102] gi|312979089|ref|ZP_07790804.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis DAPTO 516] gi|29342560|gb|AAO80325.1| ribonucleoside-diphosphate reductase 2, beta subunit [Enterococcus faecalis V583] gi|227073409|gb|EEI11372.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus faecalis TX0104] gi|227177089|gb|EEI58061.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus faecalis HH22] gi|229306611|gb|EEN72607.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus faecalis ATCC 29200] gi|229307134|gb|EEN73121.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus faecalis TX1322] gi|255962041|gb|EET94517.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T1] gi|255966408|gb|EET97030.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T2] gi|256596915|gb|EEU16091.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis ATCC 4200] gi|256682642|gb|EEU22337.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T3] gi|256712297|gb|EEU27329.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus faecalis T8] gi|256948124|gb|EEU64756.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis DS5] gi|256950159|gb|EEU66791.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis Merz96] gi|256953734|gb|EEU70366.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis HIP11704] gi|256988164|gb|EEU75466.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis JH1] gi|256988896|gb|EEU76198.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis E1Sol] gi|256991580|gb|EEU78882.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis Fly1] gi|256993853|gb|EEU81155.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis D6] gi|256997778|gb|EEU84298.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis CH188] gi|257157015|gb|EEU86975.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis ARO1/DG] gi|257160070|gb|EEU90030.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T11] gi|257162573|gb|EEU92533.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus faecalis X98] gi|291077859|gb|EFE15223.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis R712] gi|291081516|gb|EFE18479.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis S613] gi|294452314|gb|EFG20755.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis PC1.1] gi|295114163|emb|CBL32800.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Enterococcus sp. 7L76] gi|300848301|gb|EFK76058.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TUSoD Ef11] gi|306498330|gb|EFM67839.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX0411] gi|306500300|gb|EFM69639.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX0109] gi|306503650|gb|EFM72881.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX0860] gi|306507661|gb|EFM76790.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX2134] gi|306511170|gb|EFM80180.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX0855] gi|310625861|gb|EFQ09144.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis DAPTO 512] gi|310629888|gb|EFQ13171.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX0102] gi|310631838|gb|EFQ15121.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX0635] gi|311288123|gb|EFQ66679.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis DAPTO 516] gi|311292573|gb|EFQ71129.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX0470] gi|315026267|gb|EFT38199.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX2137] gi|315028520|gb|EFT40452.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX4000] gi|315032246|gb|EFT44178.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX0017] gi|315035532|gb|EFT47464.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX0027] gi|315143982|gb|EFT87998.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX2141] gi|315146930|gb|EFT90946.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX4244] gi|315155004|gb|EFT99020.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX0043] gi|315158779|gb|EFU02796.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX0312] gi|315161036|gb|EFU05053.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX0645] gi|315166222|gb|EFU10239.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX1302] gi|315167729|gb|EFU11746.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX1341] gi|315170811|gb|EFU14828.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX1342] gi|315173869|gb|EFU17886.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX1346] gi|315574921|gb|EFU87112.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX0309B] gi|315576500|gb|EFU88691.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX0630] gi|315582368|gb|EFU94559.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX0309A] gi|327534208|gb|AEA93042.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus faecalis OG1RF] Length = 321 Score = 52.3 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P + + +L+E E Y E +G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQDKLKDWMYNLLYELYENEERYTEELYDD--LGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G++PLF T NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGMDPLFADTANDVNPIV-MNGISTGTSNHDFF 295 >gi|326772780|ref|ZP_08232064.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces viscosus C505] gi|326637412|gb|EGE38314.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces viscosus C505] Length = 325 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 50/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + E+ +E + + +L E E Y + +GL Sbjct: 195 IRDEAVHGYYIGYKYQLAVRESSPERQQELKDYTFDLLMELYDNEEQYTEDLY--DELGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF NP +S D +FF + Sbjct: 253 T-EDVKKFLRYNANKALMNLGYEALFPADAVDVNPAILASLSPNADENH--DFFSGSGSS 309 Query: 116 YQQGAE-----LKWD 125 Y G WD Sbjct: 310 YVMGTAEATQDEDWD 324 >gi|108798796|ref|YP_638993.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium sp. MCS] gi|119867913|ref|YP_937865.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium sp. KMS] gi|126434397|ref|YP_001070088.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium sp. JLS] gi|108769215|gb|ABG07937.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Mycobacterium sp. MCS] gi|119694002|gb|ABL91075.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Mycobacterium sp. KMS] gi|126234197|gb|ABN97597.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Mycobacterium sp. JLS] Length = 320 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + E + + +L E E+ Y + VGL Sbjct: 190 IRDEAVHGYYIGYKFQKGLALQDPATQAELKDYTYELLFELYDNEVEYTQDLY--DSVGL 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF E NP +S D +FF + Sbjct: 248 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 304 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 305 YVIGKAVVTEDEDWD 319 >gi|296171158|ref|ZP_06852606.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894294|gb|EFG74049.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 324 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + E + + +L E E+ Y + VGL Sbjct: 194 IRDEAVHGYYIGYKYQRGLALVDEAKRAELKDYTYELLFELYDNEVEYTQDLY--DEVGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF E NP +S D +FF + Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 308 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 309 YVIGKAVVTEDEDWD 323 >gi|315153942|gb|EFT97958.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX0031] Length = 321 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P + + +L+E E Y E +G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQDKLKDWMYNLLYELYENEERYTEELYDD--LGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G++PLF T NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGMDPLFADTANDVNPIV-MNGISTGTSNHDFF 295 >gi|310816082|ref|YP_003964046.1| ribonucleoside-diphosphate reductase, beta subunit [Ketogulonicigenium vulgare Y25] gi|308754817|gb|ADO42746.1| ribonucleoside-diphosphate reductase, beta subunit [Ketogulonicigenium vulgare Y25] Length = 317 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 50/122 (40%), Gaps = 6/122 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 ++DE++H + P +E + + +L + +E +YA + +GL Sbjct: 187 IKDEAVHGYYIGYKFQLGYALLPEAEKEELKGFAYDLLLQLYEIECSYAADLY--DGIGL 244 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 +Q++ + AN+ +G +P+F NP + D + +FF + Y Sbjct: 245 T-EDVKQFLHYNANKSLMNLGFDPIFPDEITNFNPAVLAALAPDANENHDFFSGSGSSYV 303 Query: 118 QG 119 G Sbjct: 304 IG 305 >gi|307268568|ref|ZP_07549940.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX4248] gi|306515057|gb|EFM83600.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis TX4248] Length = 321 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P + + +L+E E Y E +G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQDKLKDWMYNLLYELYENEERYTEELYDD--LGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G++PLF T NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGMDPLFADTANDVNPIV-MNGISTGTSNHDFF 295 >gi|315445193|ref|YP_004078072.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Mycobacterium sp. Spyr1] gi|315263496|gb|ADU00238.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Mycobacterium sp. Spyr1] Length = 320 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E+ Y + VGL Sbjct: 190 IRDEAVHGYYIGYKFQKGLALADDATRQELKDYTYELLFELYDNEVEYTQDLY--DEVGL 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF E NP +S D +FF + Sbjct: 248 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 304 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 305 YVIGKAVVTEDEDWD 319 >gi|145224865|ref|YP_001135543.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium gilvum PYR-GCK] gi|145217351|gb|ABP46755.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Mycobacterium gilvum PYR-GCK] Length = 320 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E+ Y + VGL Sbjct: 190 IRDEAVHGYYIGYKFQKGLALADDATRQELKDYTYELLFELYDNEVEYTQDLY--DEVGL 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF E NP +S D +FF + Sbjct: 248 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 304 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 305 YVIGKAVITEDEDWD 319 >gi|311993498|ref|YP_004010363.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage Acj9] gi|295917455|gb|ADG60126.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage Acj9] Length = 379 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 42/107 (39%), Gaps = 6/107 (5%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE+LH ++ Q+ +E + ++ + E E A+A G Sbjct: 231 RDENLHHQGTRYILQQMNKGIDGTEWREIALECKAEAEELFIEVRNQERAWASYVYRDGC 290 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDL 102 GL ++ + + +GL P+ + +P PW+++ + Sbjct: 291 PPGLTVELVHDFIDYQLVPAMNNVGLTCPVQRPKRHPLPWVNKYLMA 337 >gi|320095222|ref|ZP_08026924.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces sp. oral taxon 178 str. F0338] gi|319977850|gb|EFW09491.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces sp. oral taxon 178 str. F0338] Length = 319 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 53/135 (39%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + E+ + + + ++L+E E Y + +GL Sbjct: 189 IRDEAVHGYYIGYKYQLAVGESTQERRDDLKDYTYSLLYELYENEEQYTEDLY--DPLGL 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF + NP +S D +FF + Sbjct: 247 T-EDVKKFLRYNANKALMNLGYEALFPHDATDVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 304 YVMGEVVDTEDEDWD 318 >gi|219883069|ref|YP_002478233.1| Ribonucleoside-diphosphate reductase [Arthrobacter chlorophenolicus A6] gi|219862075|gb|ACL42416.1| Ribonucleoside-diphosphate reductase [Arthrobacter chlorophenolicus A6] Length = 326 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 57/135 (42%), Gaps = 13/135 (9%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 ++DE++H + + + +E Q + +L E E+ Y H+ VGL Sbjct: 194 IKDEAVHGYYIGYKFQRGLEKETAERREELQAYAYELLDELYENEVQYTHDLY--DGVGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKN--FFETRVTEYQ 117 A ++++ + AN+ +GL+P+F + N P + + ++N FF + Y Sbjct: 252 -AEDVKKFLHYNANKALMNLGLDPVFAQDATNVNPAILSALSPNADENHDFFSGSGSSYI 310 Query: 118 QGAE-------LKWD 125 G+ WD Sbjct: 311 VGSSKAVSTLDGDWD 325 >gi|254776333|ref|ZP_05217849.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium avium subsp. avium ATCC 25291] Length = 320 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E+ Y + VGL Sbjct: 190 IRDEAVHGYYIGYKYQRGLALVDDAKRQELKDYTYELLFELYDNEVEYTQDLY--DEVGL 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF E NP +S D +FF + Sbjct: 248 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 304 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 305 YVIGKAVVTEDEDWD 319 >gi|304406354|ref|ZP_07388010.1| Ribonucleoside-diphosphate reductase [Paenibacillus curdlanolyticus YK9] gi|304344412|gb|EFM10250.1| Ribonucleoside-diphosphate reductase [Paenibacillus curdlanolyticus YK9] Length = 318 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 15/124 (12%) Query: 1 MRDESLHL----NFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56 +RDES+H +V + E E + R ++ E Y E Sbjct: 190 LRDESIHGLYVGVLAQEVYRDLTPEERG----EADTELRELIDRLHANEEVYTKELYSG- 244 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVT 114 VGL A Y+++ N+ +GL+P+F E NP + I + ++ +FF + Sbjct: 245 -VGL-ADEVLTYVRYNCNKGLMNLGLDPIFPEEEINPIVF--NGISTRTKQHDFFSKKGN 300 Query: 115 EYQQ 118 Y + Sbjct: 301 GYVR 304 >gi|320531976|ref|ZP_08032874.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp. oral taxon 171 str. F0337] gi|320135808|gb|EFW27858.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp. oral taxon 171 str. F0337] Length = 324 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 50/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + E+ +E + + +L E E Y + +GL Sbjct: 194 IRDEAVHGYYIGYKYQLAVRESSPERQQELKDYTFELLMELYDNEEQYTEDLY--DELGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF NP +S D +FF + Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPADAVDVNPAILASLSPNADENH--DFFSGSGSS 308 Query: 116 YQQGAE-----LKWD 125 Y G WD Sbjct: 309 YVMGTAEATQDEDWD 323 >gi|55978391|ref|YP_145447.1| ribonucleoside-diphosphate reductase, beta subunit [Thermus thermophilus HB8] gi|55773564|dbj|BAD72004.1| ribonucleoside-diphosphate reductase, beta subunit [Thermus thermophilus HB8] Length = 294 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 49/119 (41%), Gaps = 4/119 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL-NA 62 E++H FG++++ ++ E+P + FQ+++ + E A G L Sbjct: 165 ENVHGLFGVELLRLLRTEHPEALGEGFQEEALRLAQGLFRAEEALLDWLFSAGEPALVGH 224 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQQ 118 ++++ N+ GL P+F E W + + KE +FF R Y + Sbjct: 225 RETLEFLKGRYNQVLALHGLPPVFSVDEKALRDTEWFTLELLADKEVDFFNKRSVAYAR 283 >gi|328957625|ref|YP_004375011.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium sp. 17-4] gi|328673949|gb|AEB29995.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium sp. 17-4] Length = 320 Score = 51.6 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 45/111 (40%), Gaps = 5/111 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + + P +E + + +L + E+ YA +G Sbjct: 188 LRDESVHGTYIGYKFQIAFNQLPDDEKEEIKNWTYELLFKLYQNEVKYAEYLY--DEIGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF T N M+ + +FF Sbjct: 246 T-ERVKVFLRYNANKALQNLGFDPLFPDTANDVDPVIMNGISTGTSNHDFF 295 >gi|325066257|ref|ZP_08124930.1| Ribonucleoside-diphosphate reductase [Actinomyces oris K20] Length = 324 Score = 51.6 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 49/135 (36%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + E+ E + + +L E E Y + +GL Sbjct: 194 IRDEAVHGYYIGYKYQLAVRESSPERQAELKDYTFELLMELYDNEEQYTEDLY--DELGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF NP +S D +FF + Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPADAVDVNPAILASLSPNADENH--DFFSGSGSS 308 Query: 116 YQQGAE-----LKWD 125 Y G WD Sbjct: 309 YVMGTAEATQDEDWD 323 >gi|239636654|ref|ZP_04677656.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus warneri L37603] gi|239598009|gb|EEQ80504.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus warneri L37603] gi|330683860|gb|EGG95634.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus epidermidis VCU121] Length = 324 Score = 51.6 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 7/109 (6%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DES+H F ++ E + Q+ +L E E++Y H +GL A Sbjct: 194 DESIHGVFTGLDAQSLRNELSESEKQRADQEMYKLLKELYDNEVSYTHLLYDD--IGL-A 250 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109 Y+++ N+ +G EP F+ E NP + +D + +FF Sbjct: 251 EDVLNYVKYNGNKALSNLGFEPYFEEREFNPI--IENALDTTTKNHDFF 297 >gi|27467432|ref|NP_764069.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus epidermidis ATCC 12228] gi|57866341|ref|YP_187991.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus epidermidis RP62A] gi|251810165|ref|ZP_04824638.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus epidermidis BCM-HMP0060] gi|282875687|ref|ZP_06284558.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus epidermidis SK135] gi|293368193|ref|ZP_06614822.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus epidermidis M23864:W2(grey)] gi|27314975|gb|AAO04111.1|AE016745_210 ribonucleoside-diphosphate reductase minor subunit [Staphylococcus epidermidis ATCC 12228] gi|57636999|gb|AAW53787.1| ribonucleoside-diphosphate reductase 2, beta subunit [Staphylococcus epidermidis RP62A] gi|251806217|gb|EES58874.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus epidermidis BCM-HMP0060] gi|281295714|gb|EFA88237.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus epidermidis SK135] gi|291317616|gb|EFE58033.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus epidermidis M23864:W2(grey)] gi|329723280|gb|EGG59810.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus epidermidis VCU144] gi|329736749|gb|EGG73014.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus epidermidis VCU028] gi|329737954|gb|EGG74178.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus epidermidis VCU045] Length = 322 Score = 51.6 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 7/109 (6%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DES+H F ++ E ++ Q+ +L+E E++Y H +GL A Sbjct: 194 DESIHGVFTGLDAQSLRNELSESEKQKADQEMYKLLNELYDNEVSYTHLLYDD--IGL-A 250 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109 Y+++ N+ +G EP F+ E NP + +D + +FF Sbjct: 251 EDVLNYVRYNGNKALSNLGFEPYFEEREFNPI--IENALDTSTKNHDFF 297 >gi|41409193|ref|NP_962029.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398013|gb|AAS05643.1| NrdG [Mycobacterium avium subsp. paratuberculosis K-10] Length = 324 Score = 51.6 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E+ Y + VGL Sbjct: 194 IRDEAVHGYYIGYKYQRGLALVDDAKRQELKDYTYELLFELYDNEVEYTQDLY--DEVGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF E NP +S D +FF + Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 308 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 309 YVIGKAVVTEDEDWD 323 >gi|242372965|ref|ZP_04818539.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus epidermidis M23864:W1] gi|242349291|gb|EES40892.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus epidermidis M23864:W1] Length = 322 Score = 51.6 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DES+H F ++ E ++ Q+ +L+E E++Y H +GL Sbjct: 194 DESIHGVFTGLDAQSLRNELSESEKQKADQEMYKLLNELYDNEVSYTHLLYDD--IGLT- 250 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109 Y+++ N+ +G EP F+ E NP + +D + +FF Sbjct: 251 EDVLNYVRYNGNKALSNLGFEPYFEEREFNPI--IENALDTSTKNHDFF 297 >gi|118465359|ref|YP_883075.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium avium 104] gi|118166646|gb|ABK67543.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium avium 104] Length = 324 Score = 51.6 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E+ Y + VGL Sbjct: 194 IRDEAVHGYYIGYKYQRGLALVDDAKRQELKDYTYELLFELYDNEVEYTQDLY--DEVGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF E NP +S D +FF + Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 308 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 309 YVIGKAVVTEDEDWD 323 >gi|242242101|ref|ZP_04796546.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus epidermidis W23144] gi|242234414|gb|EES36726.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus epidermidis W23144] gi|319401190|gb|EFV89405.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus epidermidis FRI909] Length = 322 Score = 51.6 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 7/109 (6%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DES+H F ++ E ++ Q+ +L+E E++Y H +GL A Sbjct: 194 DESIHGVFTGLDAQSLRNELSESEKQKADQEMYKLLNELYDNEVSYTHLLYDD--IGL-A 250 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109 Y+++ N+ +G EP F+ E NP + +D + +FF Sbjct: 251 DDVLNYVRYNGNKALSNLGFEPYFEEREFNPI--IENALDTSTKNHDFF 297 >gi|329945141|ref|ZP_08293009.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp. oral taxon 170 str. F0386] gi|328529340|gb|EGF56255.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp. oral taxon 170 str. F0386] Length = 324 Score = 51.6 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 49/135 (36%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + E+ E + + +L E E Y + +GL Sbjct: 194 IRDEAVHGYYIGYKYQLAVRESSPERQAELKDYTFELLMELYDNEEQYTEDLY--DELGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF NP +S D +FF + Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPADAVDVNPAILASLSPNADENH--DFFSGSGSS 308 Query: 116 YQQGAE-----LKWD 125 Y G WD Sbjct: 309 YVMGTAEATQDEDWD 323 >gi|257870055|ref|ZP_05649708.1| ribonucleoside-diphosphate reductase [Enterococcus gallinarum EG2] gi|257804219|gb|EEV33041.1| ribonucleoside-diphosphate reductase [Enterococcus gallinarum EG2] Length = 322 Score = 51.6 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P + + +L+E E Y E +G Sbjct: 189 IRDESVHGTYIGYKFQLGFNELPEEEQQRLKDWMYDLLYELYENEERYTEELY--DAIGW 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 247 T-EEVKTFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 296 >gi|223043034|ref|ZP_03613082.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus capitis SK14] gi|314933044|ref|ZP_07840410.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus caprae C87] gi|222443888|gb|EEE49985.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus capitis SK14] gi|313654363|gb|EFS18119.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus caprae C87] Length = 322 Score = 51.6 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DES+H F ++ E ++ Q+ +L+E E++Y H +GL Sbjct: 194 DESIHGVFTGLDAQSLRNELSESEKQKADQEMYKLLNELYDNEVSYTHLLYDD--IGLT- 250 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109 Y+++ N+ +G EP F+ E NP + +D + +FF Sbjct: 251 EDVLNYVRYNGNKALSNLGFEPYFEEREFNPI--IENALDTSTKNHDFF 297 >gi|84997706|ref|XP_953574.1| ribonucleoside reductase [Theileria annulata] gi|65304571|emb|CAI72896.1| ribonucleoside reductase, putative [Theileria annulata] Length = 332 Score = 51.6 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 43/108 (39%), Gaps = 11/108 (10%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 D +H F ++ K + + ++ +A LE + + F L+ Sbjct: 215 DRIIHTRFAHCTFRLLQ-------NKMLESEVLEIIKQALKLEYQFILQYFTIQFFNLST 267 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI---DLKKEKN 107 + Y+++I N G + L+ +E W++ I +++K+ N Sbjct: 268 NVIKSYLEWIGNNILLVCGYKTLY-TSEFDIDWLNHPIIDLNIQKQTN 314 >gi|118469232|ref|YP_886661.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium smegmatis str. MC2 155] gi|118469934|ref|YP_885432.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium smegmatis str. MC2 155] gi|118170519|gb|ABK71415.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium smegmatis str. MC2 155] gi|118171221|gb|ABK72117.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium smegmatis str. MC2 155] Length = 324 Score = 51.6 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E+ Y + VGL Sbjct: 194 IRDEAVHGYYIGYKYQRGLALVDEEKKQELKDYTYELLFELYDNEVEYTQDLY--DSVGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF E NP ++ D +FF + Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALAPNADENH--DFFSGSGSS 308 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 309 YVIGKAVNTEDEDWD 323 >gi|99080359|ref|YP_612513.1| ribonucleotide-diphosphate reductase subunit beta [Ruegeria sp. TM1040] gi|99036639|gb|ABF63251.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Ruegeria sp. TM1040] Length = 338 Score = 51.2 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 49/131 (37%), Gaps = 10/131 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + KE + + +L + +E Y + +GL Sbjct: 208 IRDEAIHGYYIGYKFQRGLERASEAERKELKDFAFGLLFDLYDIEARYTEQLY--DGLGL 265 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEY 116 + ++ + AN+ +G E LF NP M+ + E +FF + Y Sbjct: 266 T-EDVKNFLHYNANKALQNLGFEALFPEETCRVNPAI-MAALSPGSDENHDFFSGSGSSY 323 Query: 117 Q--QGAELKWD 125 + + D Sbjct: 324 VIGKAVATEDD 334 >gi|226305840|ref|YP_002765800.1| ribonucleoside-diphosphate reductase beta chain [Rhodococcus erythropolis PR4] gi|229493405|ref|ZP_04387194.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodococcus erythropolis SK121] gi|226184957|dbj|BAH33061.1| ribonucleoside-diphosphate reductase beta chain [Rhodococcus erythropolis PR4] gi|229319721|gb|EEN85553.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodococcus erythropolis SK121] Length = 321 Score = 51.2 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 54/135 (40%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y + VGL Sbjct: 191 IRDEAVHGYYIGYKYQKGLEQLTEAEREELKNYTFELLFELYENEVDYTQDLY--DGVGL 248 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ + +G E LF E NP +S D +FF + Sbjct: 249 T-EDVKKFLRYNANKALNNLGYEGLFPKDETDVNPAILSALSPNADENH--DFFSGSGSS 305 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 306 YVIGKAVNTEDDDWD 320 >gi|325291517|ref|YP_004277381.1| ribonucleotide-diphosphate reductase subunit beta [Agrobacterium sp. H13-3] gi|325059370|gb|ADY63061.1| ribonucleotide-diphosphate reductase subunit beta [Agrobacterium sp. H13-3] Length = 324 Score = 51.2 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E Y + VGL Sbjct: 194 IRDEAVHGYYIGYKFQRALERLGEAEKQEIKDFAFDLLLELYDNEAKYTQDLY--DGVGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 +Q++ + AN+ +G E LF NP +S D +FF + Sbjct: 252 T-EDVKQFLHYNANKALMNLGYEALFPPEACRVNPAILSALSPNADENH--DFFSGSGSS 308 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 309 YVIGKAVATEDEDWD 323 >gi|240169547|ref|ZP_04748206.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium kansasii ATCC 12478] Length = 320 Score = 51.2 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 50/127 (39%), Gaps = 10/127 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + E + + +L E E+ Y + VGL Sbjct: 190 IRDEAVHGYYIGYKFQRGLALVDEVKRAELKDYTYELLFELYDNEVEYTQDLY--DEVGL 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF E NP +S D +FF + Sbjct: 248 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 304 Query: 116 YQQGAEL 122 Y G + Sbjct: 305 YVIGKAV 311 >gi|269957220|ref|YP_003327009.1| Ribonucleoside-diphosphate reductase [Xylanimonas cellulosilytica DSM 15894] gi|269305901|gb|ACZ31451.1| Ribonucleoside-diphosphate reductase [Xylanimonas cellulosilytica DSM 15894] Length = 326 Score = 51.2 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + E + + +L E E+ Y + +GL Sbjct: 196 IRDEAVHGYYIGYKFQKGLALESQERQDEIKAYTFELLFELYENEVEYTEALYGE--LGL 253 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF E NP +S D +FF + Sbjct: 254 T-EDVKKFLRYNANKALMNLGYEALFPKEETDVNPAILAALSPNADENH--DFFSGSGSS 310 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 311 YVIGKAVDTTDDDWD 325 >gi|163791218|ref|ZP_02185634.1| ribonucleotide-diphosphate [Carnobacterium sp. AT7] gi|159873488|gb|EDP67576.1| ribonucleotide-diphosphate [Carnobacterium sp. AT7] Length = 320 Score = 51.2 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 45/111 (40%), Gaps = 5/111 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + + P +E + + +L + E+ YA +G Sbjct: 188 LRDESVHGTYIGYKFQIAYNQLPDNEKEEMKNWTYELLFKLYQNEVKYAEYLY--DEIGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF T N M+ + +FF Sbjct: 246 T-ERVKVFLRYNANKALQNLGFDPLFPDTANDVDPVIMNGISTGTSNHDFF 295 >gi|225021562|ref|ZP_03710754.1| hypothetical protein CORMATOL_01583 [Corynebacterium matruchotii ATCC 33806] gi|224945553|gb|EEG26762.1| hypothetical protein CORMATOL_01583 [Corynebacterium matruchotii ATCC 33806] Length = 330 Score = 51.2 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 3/90 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + Q + +E ++ + +L+E EIAY + +G Sbjct: 200 IRDEAVHGYYIGYKFQQALAKESPARQEELKEYTFDVLYELYENEIAYTEDLY--DPLGW 257 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90 ++++++ AN+ + +G E LF E Sbjct: 258 T-EDVKRFLRYNANKALNNLGYEALFPADE 286 >gi|305681191|ref|ZP_07403998.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium matruchotii ATCC 14266] gi|305659396|gb|EFM48896.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium matruchotii ATCC 14266] Length = 330 Score = 51.2 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 3/90 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + Q + +E ++ + +L+E EIAY + +G Sbjct: 200 IRDEAVHGYYIGYKFQQALAKESPARQEELKEYTFDVLYELYENEIAYTEDLY--DPLGW 257 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90 ++++++ AN+ + +G E LF E Sbjct: 258 T-EDVKRFLRYNANKALNNLGYEALFPADE 286 >gi|323479608|gb|ADX79047.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecalis 62] Length = 321 Score = 50.8 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P + + +L+E E Y E +G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQDKLKDWMYNLLYELYENEEHYTEELYDD--LGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G++PLF T NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGMDPLFADTANDVNPIV-MNGISTGTSNHDFF 295 >gi|159184148|ref|NP_353105.2| ribonucleotide-diphosphate reductase subunit beta [Agrobacterium tumefaciens str. C58] gi|159139483|gb|AAK85890.2| ribonucleoside-diphosphate reductase 2 beta chain [Agrobacterium tumefaciens str. C58] Length = 324 Score = 50.8 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E Y + VGL Sbjct: 194 IRDEAVHGYYIGYKFQRALDRLGEAQRQEIKDFAFDLLLELYDNEAKYTEDLY--DGVGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 +Q++ + AN+ +G E LF NP +S D +FF + Sbjct: 252 T-EDVKQFLHYNANKALMNLGYEALFPAEACRVNPAILSALSPNADENH--DFFSGSGSS 308 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 309 YVIGKAVATEDEDWD 323 >gi|227496669|ref|ZP_03926945.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces urogenitalis DSM 15434] gi|226833817|gb|EEH66200.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces urogenitalis DSM 15434] Length = 324 Score = 50.8 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 49/135 (36%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + E+ E + + +L E E Y + +GL Sbjct: 194 IRDEAVHGYYIGYKYQLAVRESSPQRQAELKDYTFDLLMELYDNEEQYTEDLY--DELGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF NP +S D +FF + Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPADAVDVNPAILASLSPNADENH--DFFSGSGSS 308 Query: 116 YQQGAE-----LKWD 125 Y G WD Sbjct: 309 YVIGTAEATEDEDWD 323 >gi|307944765|ref|ZP_07660103.1| ribonucleoside-diphosphate reductase, beta subunit [Roseibium sp. TrichSKD4] gi|307771979|gb|EFO31202.1| ribonucleoside-diphosphate reductase, beta subunit [Roseibium sp. TrichSKD4] Length = 329 Score = 50.8 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 57/134 (42%), Gaps = 13/134 (9%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + +++ +E + + +++ + +E Y E++ G GL Sbjct: 199 IRDEAVHGYYIGYKFQRMQETLSEAERQEIKDFAFSLMFDLYEIEGKY-TESLYDGV-GL 256 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVI-DLKKEKNFFETRVTEY 116 + ++ + AN+ +G E LF + NP M+ + + + +FF + Y Sbjct: 257 T-EDVKHFLHYNANKALMNLGYEALFPDSVCQVNPAI-MAALSPNADENHDFFSGSGSSY 314 Query: 117 QQGAEL-----KWD 125 G + WD Sbjct: 315 VIGKAVATEDEDWD 328 >gi|319944853|ref|ZP_08019115.1| ribonucleotide-diphosphate reductase subunit beta [Lautropia mirabilis ATCC 51599] gi|319741423|gb|EFV93848.1| ribonucleotide-diphosphate reductase subunit beta [Lautropia mirabilis ATCC 51599] Length = 333 Score = 50.8 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 50/134 (37%), Gaps = 14/134 (10%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + P + + ++L E +E Y E + +GL Sbjct: 204 IRDEAVHGYYIGYKFQRALARLPEADQARLKDFAFSLLFELYEVEALYTEELYDR--IGL 261 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEY 116 + ++ + AN+ +G E LF NP + + E +FF + Y Sbjct: 262 T-EDVKAFLHYNANKALQNLGYEALFPPAACEVNPA--ILSALSPDSENHDFFSGSGSSY 318 Query: 117 QQGAEL-----KWD 125 G + WD Sbjct: 319 VIGKAVATEDEDWD 332 >gi|283457964|ref|YP_003362570.1| ribonucleotide reductase subunit beta [Rothia mucilaginosa DY-18] gi|283133985|dbj|BAI64750.1| ribonucleotide reductase, beta subunit [Rothia mucilaginosa DY-18] Length = 325 Score = 50.8 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 58/133 (43%), Gaps = 11/133 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + Q + E ++ + +L+E E+AY H ++ G G Sbjct: 195 IRDEAVHGYYIGYKFQQGLAKESAERQAELKEYTFNLLYELYENEVAYTH-SLYDGV-GW 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKN--FFETRVTEYQ 117 + ++++ + AN+ +G EP+F + N P + + ++N FF + Y Sbjct: 253 S-EDVKKFLHYNANKALMNLGYEPMFPASVTNVSPAILSALSPNADENHDFFSGSGSSYV 311 Query: 118 QGAEL-----KWD 125 G + WD Sbjct: 312 IGKAVNTEDEDWD 324 >gi|227494314|ref|ZP_03924630.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces coleocanis DSM 15436] gi|226832048|gb|EEH64431.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces coleocanis DSM 15436] Length = 322 Score = 50.8 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 10/124 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + E+ +E + + +L+E E + + +GL Sbjct: 192 IRDEAVHGYYIGYKYQLGVRESSEARQQELKDYTFDLLYELYDNEEQFTEDLY--DPLGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF NP +S D +FF + Sbjct: 250 T-EDVKKFLRYNANKALMNLGYEALFPAESCDVNPAILASLSPNADENH--DFFSGSGSS 306 Query: 116 YQQG 119 Y G Sbjct: 307 YVIG 310 >gi|325675841|ref|ZP_08155525.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus equi ATCC 33707] gi|325553812|gb|EGD23490.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus equi ATCC 33707] Length = 335 Score = 50.8 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E+ Y + VGL Sbjct: 205 IRDEAVHGYYIGYKYQRGLERVTEAEREELKNYTFELLFELYDNEVEYTQDLY--DEVGL 262 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF E NP +S D +FF + Sbjct: 263 T-EDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENH--DFFSGSGSS 319 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 320 YVIGKAVNTEDDDWD 334 >gi|3068719|gb|AAC14561.1| ribonucleoside diphosphate reductase small subunit [Corynebacterium ammoniagenes] Length = 329 Score = 50.8 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 55/135 (40%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + Q + +E++ + ++++ EI Y + +G Sbjct: 199 IRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENEIEYTEDIYDD--LGW 256 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ + +G E LF E +P +S D +FF + Sbjct: 257 T-EDVKRFLRYNANKALNNLGYEGLFPTDETKVSPAILSSLSPNADENH--DFFSGSGSS 313 Query: 116 YQQG-----AELKWD 125 Y G + WD Sbjct: 314 YVIGKAEDTTDDDWD 328 >gi|18158911|pdb|1KGN|A Chain A, R2f From Corynebacterium Ammoniagenes In Its Oxidised, Fe Containing, Form gi|18158912|pdb|1KGN|B Chain B, R2f From Corynebacterium Ammoniagenes In Its Oxidised, Fe Containing, Form gi|18158913|pdb|1KGN|C Chain C, R2f From Corynebacterium Ammoniagenes In Its Oxidised, Fe Containing, Form gi|18158914|pdb|1KGN|D Chain D, R2f From Corynebacterium Ammoniagenes In Its Oxidised, Fe Containing, Form gi|18158915|pdb|1KGO|A Chain A, R2f From Corynebacterium Ammoniagenes In Its Reduced, Fe Containing, Form gi|18158916|pdb|1KGO|B Chain B, R2f From Corynebacterium Ammoniagenes In Its Reduced, Fe Containing, Form gi|18158917|pdb|1KGO|C Chain C, R2f From Corynebacterium Ammoniagenes In Its Reduced, Fe Containing, Form gi|18158918|pdb|1KGO|D Chain D, R2f From Corynebacterium Ammoniagenes In Its Reduced, Fe Containing, Form gi|18158919|pdb|1KGP|A Chain A, R2f From Corynebacterium Ammoniagenes In Its Mn Substituted Form gi|18158920|pdb|1KGP|B Chain B, R2f From Corynebacterium Ammoniagenes In Its Mn Substituted Form gi|18158921|pdb|1KGP|C Chain C, R2f From Corynebacterium Ammoniagenes In Its Mn Substituted Form gi|18158922|pdb|1KGP|D Chain D, R2f From Corynebacterium Ammoniagenes In Its Mn Substituted Form gi|48425146|pdb|1OQU|A Chain A, A Protein Coordinated Tri-Nuclear Fe Complex Formed During Soaking Of Crystals Of The Ribonucleotide Reductase R2f Protein From Corynebacterium Ammoniagenes gi|48425147|pdb|1OQU|B Chain B, A Protein Coordinated Tri-Nuclear Fe Complex Formed During Soaking Of Crystals Of The Ribonucleotide Reductase R2f Protein From Corynebacterium Ammoniagenes gi|48425148|pdb|1OQU|C Chain C, A Protein Coordinated Tri-Nuclear Fe Complex Formed During Soaking Of Crystals Of The Ribonucleotide Reductase R2f Protein From Corynebacterium Ammoniagenes gi|48425149|pdb|1OQU|D Chain D, A Protein Coordinated Tri-Nuclear Fe Complex Formed During Soaking Of Crystals Of The Ribonucleotide Reductase R2f Protein From Corynebacterium Ammoniagenes gi|193506844|pdb|3DHZ|A Chain A, Apo (Iron Free) Structure Of C. Ammoniagenes R2 Protein gi|193506845|pdb|3DHZ|B Chain B, Apo (Iron Free) Structure Of C. Ammoniagenes R2 Protein gi|3077614|emb|CAA70766.1| ribonucleotide reductase subunit R2F [Corynebacterium ammoniagenes] Length = 329 Score = 50.4 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 55/135 (40%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + Q + +E++ + ++++ EI Y + +G Sbjct: 199 IRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENEIEYTEDIYDD--LGW 256 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ + +G E LF E +P +S D +FF + Sbjct: 257 T-EDVKRFLRYNANKALNNLGYEGLFPTDETKVSPAILSSLSPNADENH--DFFSGSGSS 313 Query: 116 YQQG-----AELKWD 125 Y G + WD Sbjct: 314 YVIGKAEDTTDDDWD 328 >gi|289809666|ref|ZP_06540295.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 74 Score = 50.4 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 4/67 (5%) Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTEY---QQ 118 QY+++I N R +GL+ F+ NP PW++ ++ + E V+ Y Q Sbjct: 1 DILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQI 60 Query: 119 GAELKWD 125 +E+ D Sbjct: 61 DSEVDTD 67 >gi|304445906|pdb|3MJO|A Chain A, Small Subunit (R2f) Of Native Ribonucleotide Reductase From Corynebacterium Ammoniagenes gi|304445907|pdb|3MJO|B Chain B, Small Subunit (R2f) Of Native Ribonucleotide Reductase From Corynebacterium Ammoniagenes Length = 296 Score = 50.4 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 41/90 (45%), Gaps = 3/90 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + Q + +E++ + ++++ EI Y + +G Sbjct: 198 IRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENEIEYTEDIYDD--LGW 255 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90 ++++++ AN+ + +G E LF E Sbjct: 256 T-EDVKRFLRYNANKALNNLGYEGLFPTDE 284 >gi|296128314|ref|YP_003635564.1| Ribonucleoside-diphosphate reductase [Cellulomonas flavigena DSM 20109] gi|296020129|gb|ADG73365.1| Ribonucleoside-diphosphate reductase [Cellulomonas flavigena DSM 20109] Length = 326 Score = 50.4 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + E + + +L E E+ Y + +GL Sbjct: 196 IRDEAVHGYYIGYKFQKGLERVSEAERAELKDYTFNLLFELYDNEVEYTQDLY--DELGL 253 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF E NP +S D +FF + Sbjct: 254 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILAALSPNADENH--DFFSGSGSS 310 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 311 YVIGKAVNTEDDDWD 325 >gi|312140539|ref|YP_004007875.1| ribonucleoside-diphosphate reductase nrdf [Rhodococcus equi 103S] gi|311889878|emb|CBH49195.1| ribonucleoside-diphosphate reductase NrdF [Rhodococcus equi 103S] Length = 329 Score = 50.4 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E+ Y + VGL Sbjct: 199 IRDEAVHGYYIGYKYQRGLERVTEAEREELKNYTFELLFELYDNEVEYTQDLY--DEVGL 256 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF E NP +S D +FF + Sbjct: 257 T-EDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENH--DFFSGSGSS 313 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 314 YVIGKAVNTEDDDWD 328 >gi|308177564|ref|YP_003916970.1| ribonucleoside-diphosphate reductase subunit beta [Arthrobacter arilaitensis Re117] gi|307745027|emb|CBT75999.1| ribonucleoside-diphosphate reductase beta chain [Arthrobacter arilaitensis Re117] Length = 324 Score = 50.4 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 55/133 (41%), Gaps = 11/133 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +++E E+ Y H+ VGL Sbjct: 194 IRDEAVHGYYIGYKFQKGLENETEERKQELKDYTFELMYELYENEVQYTHDLY--DPVGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKN--FFETRVTEYQ 117 + ++++ + AN+ +G E +F T + P + + ++N FF + Y Sbjct: 252 S-EDVKKFLHYNANKALMNLGYEAMFPSTVTDVSPAILAALSPNADENHDFFSGSGSSYV 310 Query: 118 QGAEL-----KWD 125 G + WD Sbjct: 311 IGKAVNTEDEDWD 323 >gi|254489413|ref|ZP_05102616.1| ribonucleoside-diphosphate reductase, beta subunit [Roseobacter sp. GAI101] gi|214041920|gb|EEB82560.1| ribonucleoside-diphosphate reductase, beta subunit [Roseobacter sp. GAI101] Length = 324 Score = 50.4 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 50/134 (37%), Gaps = 14/134 (10%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + P + + +++ + +E Y E +GL Sbjct: 195 IRDEAIHGYYIGYKFQRATEQLPQADRDALKDFAFSLMFDLYEIEAHYTAELYDD--LGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEK-NFFETRVTEY 116 + ++ + AN+ +G E LF NP + + E +FF + Y Sbjct: 253 T-EDVKAFLHYNANKALQNLGYEALFPAQVCEVNPA--ILAALSPDSENHDFFSGSGSSY 309 Query: 117 QQGAEL-----KWD 125 G + WD Sbjct: 310 VIGKAVATEDEDWD 323 >gi|253990649|ref|YP_003042005.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782099|emb|CAQ85263.1| ribonucleoside-diphosphate reductase 2 beta chain [Photorhabdus asymbiotica] Length = 319 Score = 50.4 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 55/142 (38%), Gaps = 29/142 (20%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + Q + P+ KE + + ++L + EI Y + VG Sbjct: 189 IRDEAIHGYYIGYKFQQSLNKYPNSEKKEIKDFTFSLLFDLYENEIKYTEDLY--DIVGW 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL------------KKEKNF 108 ++++ + AN+ +G E LF +SE+ D+ + +F Sbjct: 247 T-EDVKKFLHYNANKALMNLGYEALF---------LSEMTDVSPAILSALSPGANENHDF 296 Query: 109 FETRVTEYQQGAEL-----KWD 125 F + Y G + WD Sbjct: 297 FSGSGSSYVIGKAVNTEDEDWD 318 >gi|313884792|ref|ZP_07818546.1| ribonucleoside-diphosphate reductase, beta subunit [Eremococcus coleocola ACS-139-V-Col8] gi|312619991|gb|EFR31426.1| ribonucleoside-diphosphate reductase, beta subunit [Eremococcus coleocola ACS-139-V-Col8] Length = 363 Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 40/112 (35%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + +E +Q + E E Y +G Sbjct: 189 LRDESVHGTYIGYKFQLGYNALSETDQEELKQWVFNLCFELYSNEEKYTSYIY--DELGW 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 247 T-EEVNTFVRYNANKALQNLGFDPLFADTAEDVNPIV-MNGISTGTSNHDFF 296 >gi|269861603|ref|XP_002650501.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220066034|gb|EED43552.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] Length = 53 Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%) Query: 88 YTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + NPF +M E I L+ + NFFE R YQ+G Sbjct: 7 HVSNPFDFM-ENISLQGKTNFFERREANYQKG 37 >gi|308187851|ref|YP_003931982.1| ribonucleoside-diphosphate reductase beta chain [Pantoea vagans C9-1] gi|308058361|gb|ADO10533.1| ribonucleoside-diphosphate reductase beta chain [Pantoea vagans C9-1] Length = 326 Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 48/128 (37%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + Q L +E QQ + +L E+AY VG Sbjct: 196 IRDEAVHGYYIGYKYQQALASADDLRREELQQFAYDLLLALYENEVAYTEALYGD--VGW 253 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++ + AN+ +G E LF NP +S D +FF + Sbjct: 254 -VDEVKTFLHYNANKALMNLGYEALFPAELTAVNPAILSALSPNADENH--DFFSGSGSS 310 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 311 YVMGKAVE 318 >gi|209877300|ref|XP_002140092.1| ribonucleoside-diphosphate reductase beta subunit family protein [Cryptosporidium muris RN66] gi|209555698|gb|EEA05743.1| ribonucleoside-diphosphate reductase beta subunit family protein [Cryptosporidium muris RN66] Length = 357 Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 35/100 (35%), Gaps = 11/100 (11%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE F I + + TK + +ML A +E + + + Sbjct: 226 RDELFQAEF-CLSIAR------SMKTKPSNEYIISMLENAITIEKGFIFSIFNLEILEIP 278 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101 Y+ F A+ ++ F + NPF SE+I Sbjct: 279 REDIVAYLLFSADEILVELKYPRHFNVS-NPF---SELIS 314 >gi|70926559|ref|XP_735800.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56509782|emb|CAH82994.1| hypothetical protein PC300265.00.0 [Plasmodium chabaudi chabaudi] Length = 106 Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 29/72 (40%), Gaps = 2/72 (2%) Query: 24 HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE 83 HL K + + A LE + E + + + +Q++Q++A+ + Sbjct: 2 HLNNK-LKYEVLDYFKTAVDLEYNFCVEMLDFDSLKITKDQVKQFLQYLADTMLVNLKYS 60 Query: 84 PLFKYTENPFPW 95 + ++ PF W Sbjct: 61 KHYN-SKYPFTW 71 >gi|254471227|ref|ZP_05084629.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudovibrio sp. JE062] gi|211959373|gb|EEA94571.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudovibrio sp. JE062] Length = 325 Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 49/135 (36%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + E + + T+L + LE Y + +GL Sbjct: 195 IRDEAVHGYYIGYKFQRGLERLSEAERTEIKDFAFTLLFDLYDLETKYTEDLY--DPLGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++ + N+ +G E LF T NP +S D +FF + Sbjct: 253 T-EDVKHFLHYNGNKALQNLGFEGLFPETICQVNPAIMASLSPNADENH--DFFSGSGSS 309 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 310 YVIGKAVATEDEDWD 324 >gi|255327220|ref|ZP_05368295.1| ribonucleoside-diphosphate reductase, beta subunit [Rothia mucilaginosa ATCC 25296] gi|255295838|gb|EET75180.1| ribonucleoside-diphosphate reductase, beta subunit [Rothia mucilaginosa ATCC 25296] Length = 325 Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 58/133 (43%), Gaps = 11/133 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + E ++ + +L+E E+AY H ++ G G Sbjct: 195 IRDEAVHGYYIGYKFQRGLAKESAERQAELKEYTFNLLYELYENEVAYTH-SLYDGV-GW 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKN--FFETRVTEYQ 117 + ++++ + AN+ +G EP+F T N P + + ++N FF + Y Sbjct: 253 S-EDVKKFLHYNANKALMNLGYEPMFPATVTNVSPAILSALSPNADENHDFFSGSGSSYV 311 Query: 118 QGAEL-----KWD 125 G + WD Sbjct: 312 IGKAVNTEDEDWD 324 >gi|330941351|gb|EGH44203.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas syringae pv. pisi str. 1704B] Length = 317 Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 24/27 (88%), Positives = 26/27 (96%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWT 27 +RDES+HLNFGIDVINQIKIENPHLW Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWD 317 >gi|332671991|ref|YP_004454999.1| ribonucleoside-diphosphate reductase [Cellulomonas fimi ATCC 484] gi|332341029|gb|AEE47612.1| Ribonucleoside-diphosphate reductase [Cellulomonas fimi ATCC 484] Length = 326 Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y + VGL Sbjct: 196 IRDEAVHGYYIGYKFQKGLEKLSPEERQELKDYTFELLFELYDNEVEYTQDLY--DGVGL 253 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF E NP +S D +FF + Sbjct: 254 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 310 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 311 YVIGKAVNTEDEDWD 325 >gi|322372696|ref|ZP_08047232.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus sp. C150] gi|321277738|gb|EFX54807.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus sp. C150] Length = 319 Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P + F++ +L+E E Y ++ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQESFREWMYDLLYELYENEELYTK-SLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDSANDVNPIV-MNGISTGTSNHDFF 295 >gi|259046997|ref|ZP_05737398.1| ribonucleoside-diphosphate reductase 2, beta subunit [Granulicatella adiacens ATCC 49175] gi|259036316|gb|EEW37571.1| ribonucleoside-diphosphate reductase 2, beta subunit [Granulicatella adiacens ATCC 49175] Length = 346 Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 5/111 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + Q E +E + + E E+ Y VG Sbjct: 215 IRDESVHGTYTGYKFQQGYNELSEQEQEEMKMWVYNLCLELYQNEVKYTQSIY--DQVGW 272 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF T M+ + +FF Sbjct: 273 T-EKVKVFIRYNANKALQNLGFDPLFPDTAEDVDPIVMNGISTGTSNHDFF 322 >gi|229818600|ref|YP_002880126.1| Ribonucleoside-diphosphate reductase [Beutenbergia cavernae DSM 12333] gi|229564513|gb|ACQ78364.1| Ribonucleoside-diphosphate reductase [Beutenbergia cavernae DSM 12333] Length = 326 Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E+ Y + VGL Sbjct: 196 IRDEAVHGYYIGYKFQRGLEALAPEQREEIKSYTYELLFELYENEVQYTEDLY--DEVGL 253 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF E NP +S D +FF + Sbjct: 254 T-EDVKKFLRYNANKALMNLGYEALFPKDETDVNPAILAALSPNADENH--DFFSGSGSS 310 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 311 YVIGKAVNTEDDDWD 325 >gi|229823057|ref|ZP_04449126.1| hypothetical protein GCWU000282_00352 [Catonella morbi ATCC 51271] gi|229787496|gb|EEP23610.1| hypothetical protein GCWU000282_00352 [Catonella morbi ATCC 51271] Length = 336 Score = 49.6 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 5/111 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P E + + + E Y VG Sbjct: 205 IRDESVHGTYTGYKFQLGYNELPEDQQAELKMWVYELCMDLYQNEAKYTQSLY--DQVGW 262 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF T M+ + +FF Sbjct: 263 T-EKVKVFIRYNANKALQNLGFDPLFPDTAEDVDPIVMNGISTGTSNHDFF 312 >gi|317506846|ref|ZP_07964618.1| ribonucleotide reductase [Segniliparus rugosus ATCC BAA-974] gi|316254774|gb|EFV14072.1| ribonucleotide reductase [Segniliparus rugosus ATCC BAA-974] Length = 332 Score = 49.6 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + ++L + E+ Y + VGL Sbjct: 202 IRDEAVHGYYIGYKYQRGLAASTEQRREELKDFTFSLLFDLYENEVEYTQDLY--DPVGL 259 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ + +G E LF E NP +S D +FF + Sbjct: 260 T-EDVKKFLRYNANKALNNLGYEGLFPKDETSVNPAILSALSPNADENH--DFFSGSGSS 316 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 317 YVIGKAVATEDEDWD 331 >gi|224475873|ref|YP_002633479.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus carnosus subsp. carnosus TM300] gi|222420480|emb|CAL27294.1| ribonucleoside-diphosphate reductase beta chain [Staphylococcus carnosus subsp. carnosus TM300] Length = 324 Score = 49.6 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 7/109 (6%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DES+H F ++ E + Q +L E E++Y H+ +GL A Sbjct: 194 DESIHGVFTGLDAQHLRNELSENEKQRADQHMYKLLEELYKNEVSYTHKLYDD--IGL-A 250 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109 Y+++ N+ +G EP F+ E NP + +D + +FF Sbjct: 251 EDVLNYVRYNGNKALSNLGFEPYFEEREFNPI--IENALDTSTKNHDFF 297 >gi|327489434|gb|EGF21227.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus sanguinis SK1058] Length = 319 Score = 49.6 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y VG Sbjct: 188 IRDESVHGTYIGYKFQLAFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLY--DTVGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295 >gi|5230837|gb|AAD41037.1|AF112536_1 ribonucleotide reductase beta-chain [Corynebacterium glutamicum] Length = 334 Score = 49.6 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 54/132 (40%), Gaps = 12/132 (9%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E ++ + +L++ E Y+ + +G Sbjct: 204 IRDEAVHGYYIGYKYQKAVAKETPERQEELKEYTFDLLYDLYDNETQYSEDLYDD--LGW 261 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----NPFPWMSEVIDLKKEKNFFETRVTE 115 ++++++IAN+ + +G E LF E N +S D +FF + Sbjct: 262 T-EDVKRFLRYIANKALNNLGYEGLFPADETKVSPNILSALSPNADENH--DFFSGSGSS 318 Query: 116 YQ--QGAELKWD 125 Y + + D Sbjct: 319 YVIGKAENTEDD 330 >gi|296118681|ref|ZP_06837257.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium ammoniagenes DSM 20306] gi|295968170|gb|EFG81419.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium ammoniagenes DSM 20306] Length = 329 Score = 49.6 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 55/135 (40%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + Q + +E++ + ++++ E+ Y + +G Sbjct: 199 IRDESVHGYYIGYKYQQGVKKLSEEKQQEYKDYTFDLMYDLYENELEYTEDIYDD--LGW 256 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ + +G E LF E +P +S D +FF + Sbjct: 257 T-EDVKRFLRYNANKALNNLGYEGLFPTDETKVSPAILSSLSPNADENH--DFFSGSGSS 313 Query: 116 YQQGAELK-----WD 125 Y G + WD Sbjct: 314 YVIGKAEETVDDDWD 328 >gi|209551073|ref|YP_002282990.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536829|gb|ACI56764.1| Ribonucleoside-diphosphate reductase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 324 Score = 49.6 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 50/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E Y E + G GL Sbjct: 194 IRDEAVHGYYIGYKFQRGLERLSEERKQEIKDFAFDLLLELYDNEARY-TEALYDGV-GL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF NP +S D +FF + Sbjct: 252 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 308 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 309 YVIGKAVATEDEDWD 323 >gi|125717616|ref|YP_001034749.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus sanguinis SK36] gi|323352633|ref|ZP_08087603.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus sanguinis VMC66] gi|125497533|gb|ABN44199.1| Ribonucleoside-diphosphate reductase 2, beta subunit, putative [Streptococcus sanguinis SK36] gi|322121669|gb|EFX93415.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus sanguinis VMC66] gi|325688330|gb|EGD30349.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus sanguinis SK72] gi|325690076|gb|EGD32080.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus sanguinis SK115] gi|332363056|gb|EGJ40843.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus sanguinis SK355] Length = 319 Score = 49.6 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y VG Sbjct: 188 IRDESVHGTYIGYKFQLAFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLY--DTVGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295 >gi|116670901|ref|YP_831834.1| ribonucleotide-diphosphate reductase subunit beta [Arthrobacter sp. FB24] gi|116611010|gb|ABK03734.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Arthrobacter sp. FB24] Length = 324 Score = 49.6 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 54/135 (40%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y H+ VGL Sbjct: 194 IRDEAVHGYYIGYKFQKGLEKVSEEKRQEIKDYTFELLFELYENEVQYTHDLY--DSVGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115 A ++++ + AN+ +G E +F + NP +S D +FF + Sbjct: 252 -AEDVKKFLHYNANKALMNLGYEAMFPASVTDVNPAILSALSPNADENH--DFFSGSGSS 308 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 309 YVIGKAVNTEDEDWD 323 >gi|322412098|gb|EFY03006.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 319 Score = 49.6 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P + F++ +L++ E Y T+ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEAEQETFREWMYDLLYQLYENEEDYTK-TLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295 >gi|262283137|ref|ZP_06060904.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus sp. 2_1_36FAA] gi|262261389|gb|EEY80088.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus sp. 2_1_36FAA] Length = 319 Score = 49.6 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y ET+ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQEKLKEWMYDLLYTLYENEEGY-TETLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDTADDVNPIV-MNGISTGTSNHDFF 295 >gi|33340378|gb|AAQ14729.1|AF320576_197 putative ribonucleoside diphosphate reductase beta chain [Enterobacteria phage Felix 01] Length = 377 Score = 49.6 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 9/121 (7%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQ---KSRTMLHEATLLEIAYAHETM--PKGF 57 DE LH I+V+ + + W K FQQ + + +L E E +++ + Sbjct: 242 DEILHTKIDIEVLKETLRD--DEWQKAFQQILPEIKVILDEVVESEEKWSYYIFSEGRAV 299 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-PFPWMSEVIDLKKEKNF-FETRVTE 115 VGLN +++ + A G+ F + P +M + +++ KE+N E + Sbjct: 300 VGLNTKLLHEWVYYNAAPLYDMFGIPRDFVAPKEPPLKYMIKKMEIDKEQNANQEQQNGA 359 Query: 116 Y 116 Y Sbjct: 360 Y 360 >gi|332361651|gb|EGJ39455.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus sanguinis SK1056] gi|332365967|gb|EGJ43723.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus sanguinis SK1059] Length = 319 Score = 49.6 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y VG Sbjct: 188 IRDESVHGTYIGYKFQLAFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLY--DTVGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295 >gi|38707874|ref|NP_944994.1| Ribonucleoside triphosphate reductase, beta chain [Enterobacteria phage Felix 01] gi|238801854|ref|YP_002922904.1| ribonucleoside triphosphate reductase, beta chain [Enterobacteria phage WV8] gi|33340477|gb|AAQ14828.1| putative ribonucleoside diphosphate reductase beta chain [Enterobacteria phage Felix 01] gi|216263067|gb|ACJ71935.1| ribonucleoside triphosphate reductase, beta chain [Enterobacteria phage WV8] Length = 357 Score = 49.6 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 9/121 (7%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQ---KSRTMLHEATLLEIAYAHETM--PKGF 57 DE LH I+V+ + + W K FQQ + + +L E E +++ + Sbjct: 222 DEILHTKIDIEVLKETLRD--DEWQKAFQQILPEIKVILDEVVESEEKWSYYIFSEGRAV 279 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-PFPWMSEVIDLKKEKNF-FETRVTE 115 VGLN +++ + A G+ F + P +M + +++ KE+N E + Sbjct: 280 VGLNTKLLHEWVYYNAAPLYDMFGIPRDFVAPKEPPLKYMIKKMEIDKEQNANQEQQNGA 339 Query: 116 Y 116 Y Sbjct: 340 Y 340 >gi|325694009|gb|EGD35927.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus sanguinis SK150] Length = 319 Score = 49.6 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y VG Sbjct: 188 IRDESVHGTYIGYKFQLAFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLY--DTVGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295 >gi|327458665|gb|EGF05013.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus sanguinis SK1057] Length = 319 Score = 49.6 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y VG Sbjct: 188 IRDESVHGTYIGYKFQLAFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLY--DTVGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295 >gi|260426338|ref|ZP_05780317.1| ribonucleoside-diphosphate reductase, beta subunit [Citreicella sp. SE45] gi|260420830|gb|EEX14081.1| ribonucleoside-diphosphate reductase, beta subunit [Citreicella sp. SE45] Length = 324 Score = 49.6 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 49/134 (36%), Gaps = 14/134 (10%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E +E Y E +GL Sbjct: 195 IRDEAVHGYYIGYKFQRAMERETAERRQELKDYAFGLLFELYEIEGHYTEELYDD--LGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEY 116 + ++ + AN+ +G E LF NP + + E +FF + Y Sbjct: 253 T-EEVKSFLHYNANKALQNLGFEALFPPEACEVNPA--ILAALSPDSENHDFFSGSGSSY 309 Query: 117 QQGAEL-----KWD 125 G + WD Sbjct: 310 VIGRAVATEDDDWD 323 >gi|269975299|gb|ACZ55523.1| ribonucleoside diphosphate reductase beta chain [Staphylococcus phage SA1] Length = 357 Score = 49.6 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 9/121 (7%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQ---KSRTMLHEATLLEIAYAHETM--PKGF 57 DE LH I+V+ + + W K FQQ + + +L E E +++ + Sbjct: 222 DEILHTKIDIEVLKETLRD--DEWQKAFQQILPEIKVILDEVVESEEKWSYYIFSEGRAV 279 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-PFPWMSEVIDLKKEKNF-FETRVTE 115 VGLN +++ + A G+ F + P +M + +++ KE+N E + Sbjct: 280 VGLNTKLLHEWVYYNAAPLYDMFGIPRDFVAPKEPPLKYMIKKMEIDKEQNANQEQQNGA 339 Query: 116 Y 116 Y Sbjct: 340 Y 340 >gi|94990703|ref|YP_598803.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pyogenes MGAS10270] gi|94544211|gb|ABF34259.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus pyogenes MGAS10270] Length = 320 Score = 49.6 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P + F+ +L++ E Y T+ G G Sbjct: 189 IRDESVHGTYIGYKFQLGFNELPEDEQENFRDWMYDLLYQLYENEEKYTK-TLYDGV-GW 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 247 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 296 >gi|19746348|ref|NP_607484.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pyogenes MGAS8232] gi|50914444|ref|YP_060416.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pyogenes MGAS10394] gi|71903783|ref|YP_280586.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pyogenes MGAS6180] gi|94994624|ref|YP_602722.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pyogenes MGAS10750] gi|139473584|ref|YP_001128300.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pyogenes str. Manfredo] gi|19748543|gb|AAL97983.1| ribonucleotide diphosphate reductase small subunit [Streptococcus pyogenes MGAS8232] gi|50903518|gb|AAT87233.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus pyogenes MGAS10394] gi|71802878|gb|AAX72231.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus pyogenes MGAS6180] gi|94548132|gb|ABF38178.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus pyogenes MGAS10750] gi|134271831|emb|CAM30066.1| putative ribonucleoside-diphosphate reductase beta chain [Streptococcus pyogenes str. Manfredo] Length = 319 Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P + F+ +L++ E Y T+ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQENFRDWMYDLLYQLYENEEKYTK-TLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295 >gi|22536982|ref|NP_687833.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus agalactiae 2603V/R] gi|25010891|ref|NP_735286.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus agalactiae NEM316] gi|76788606|ref|YP_329564.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus agalactiae A909] gi|76799231|ref|ZP_00781405.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus agalactiae 18RS21] gi|77405557|ref|ZP_00782648.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus agalactiae H36B] gi|77408849|ref|ZP_00785576.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus agalactiae COH1] gi|77413113|ref|ZP_00789313.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus agalactiae 515] gi|22533837|gb|AAM99705.1|AE014229_6 ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus agalactiae 2603V/R] gi|23095270|emb|CAD46480.1| Unknown [Streptococcus agalactiae NEM316] gi|76563663|gb|ABA46247.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus agalactiae A909] gi|76585414|gb|EAO61998.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus agalactiae 18RS21] gi|77160814|gb|EAO71925.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus agalactiae 515] gi|77172535|gb|EAO75677.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus agalactiae COH1] gi|77175864|gb|EAO78642.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus agalactiae H36B] gi|319744839|gb|EFV97177.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus agalactiae ATCC 13813] Length = 319 Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P + F+ +L++ E Y T+ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQENFRDWMYDLLYQLYENEEKYTK-TLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295 >gi|310641424|ref|YP_003946182.1| ribonucleoside-diphosphate reductase beta chain [Paenibacillus polymyxa SC2] gi|309246374|gb|ADO55941.1| Ribonucleoside-diphosphate reductase beta chain [Paenibacillus polymyxa SC2] Length = 321 Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 52/120 (43%), Gaps = 5/120 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + + +I E ++ Q +L E Y + +GL Sbjct: 191 LRDESIHGVYVGVLAQEIYAELDEEEQRDLYQTLVGLLRYLHNNEEQYTEQIY--APIGL 248 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119 + ++++ AN+ +G +PLF+ E NP + + + K+ +FF + Y + Sbjct: 249 -VDDVKVFLRYNANKAMMNLGFDPLFEEEEVNPIVF-NGISTHTKQHDFFSKKGNGYVRA 306 >gi|15675308|ref|NP_269482.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pyogenes M1 GAS] gi|21910586|ref|NP_664854.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pyogenes MGAS315] gi|28895723|ref|NP_802073.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pyogenes SSI-1] gi|71910937|ref|YP_282487.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pyogenes MGAS5005] gi|94988801|ref|YP_596902.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pyogenes MGAS9429] gi|94992686|ref|YP_600785.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pyogenes MGAS2096] gi|306826388|ref|ZP_07459706.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pyogenes ATCC 10782] gi|13622486|gb|AAK34203.1| ribonucleotide diphosphate reductase small subunit [Streptococcus pyogenes M1 GAS] gi|21904787|gb|AAM79657.1| putative ribonucleoside-diphosphate reductase 2 beta subunit [Streptococcus pyogenes MGAS315] gi|28810972|dbj|BAC63906.1| putative ribonucleotide diphosphate reductase, small subunit [Streptococcus pyogenes SSI-1] gi|71853719|gb|AAZ51742.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus pyogenes MGAS5005] gi|94542309|gb|ABF32358.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus pyogenes MGAS9429] gi|94546194|gb|ABF36241.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus pyogenes MGAS2096] gi|304431419|gb|EFM34410.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pyogenes ATCC 10782] Length = 319 Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P + F+ +L++ E Y T+ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQENFRDWMYDLLYQLYENEEKYTK-TLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295 >gi|77410697|ref|ZP_00787056.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus agalactiae CJB111] gi|77163233|gb|EAO74185.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus agalactiae CJB111] Length = 319 Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P + F+ +L++ E Y T+ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQENFRDWMYDLLYQLYENEEKYTK-TLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295 >gi|56808544|ref|ZP_00366279.1| COG0208: Ribonucleotide reductase, beta subunit [Streptococcus pyogenes M49 591] gi|209559615|ref|YP_002286087.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pyogenes NZ131] gi|209540816|gb|ACI61392.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit [Streptococcus pyogenes NZ131] Length = 319 Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P + F+ +L++ E Y T+ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQENFRDWMYDLLYQLYENEEKYTK-TLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295 >gi|157149762|ref|YP_001450838.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus gordonii str. Challis substr. CH1] gi|157074556|gb|ABV09239.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus gordonii str. Challis substr. CH1] Length = 319 Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y ET+ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TETLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDTADDVNPIV-MNGISTGTSNHDFF 295 >gi|332362636|gb|EGJ40434.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus sanguinis SK49] Length = 332 Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y VG Sbjct: 201 IRDESVHGTYIGYKFQLGFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLY--DTVGW 258 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 259 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 308 >gi|319938784|ref|ZP_08013148.1| ribonucleoside-diphosphate reductase [Streptococcus anginosus 1_2_62CV] gi|319811834|gb|EFW08100.1| ribonucleoside-diphosphate reductase [Streptococcus anginosus 1_2_62CV] Length = 319 Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P + F++ +L+ E Y ET+ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQETFREWMYDLLYTLYENEEGY-TETLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDTADDVNPIV-MNGISTGTSNHDFF 295 >gi|158079504|ref|YP_001504317.1| putative ribonucleotide reductase [Enterococcus phage phiEF24C] gi|157890348|dbj|BAF81476.1| putative ribonucleotide reductase [Enterococcus phage phiEF24C] Length = 327 Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + + P KE +Q + + E Y E + +G Sbjct: 190 IRDESVHGTYIGYKYQLGFNQLPETEQKEMEQWVIDLAFKLWENETQYTAELYSE--IGW 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ N+ +G+ PLF T NP M+ + +FF Sbjct: 248 T-KDVNTFLEYNLNKALANLGMNPLFPTTSADVNPIV-MNGISTTTSNHDFF 297 >gi|218663032|ref|ZP_03518962.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium etli IE4771] Length = 324 Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 50/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E Y E + G GL Sbjct: 194 IRDEAVHGYYIGYKFQRGLERLSEERRQEIKDFAFDLLLELYDNEARY-TEALYDGV-GL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF NP +S D +FF + Sbjct: 252 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 308 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 309 YVIGKAVATEDEDWD 323 >gi|240849861|ref|YP_002971249.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella grahamii as4aup] gi|240266984|gb|ACS50572.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella grahamii as4aup] Length = 324 Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 47/132 (35%), Gaps = 12/132 (9%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + KE + + +L + +E Y + +GL Sbjct: 194 IRDEAVHGYYIGYKFQLGFAKLDEAKKKEIKDFAFNLLFDLYNIECKYTEDLY--DALGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++ + AN+ +G E LF NP +S D +FF + Sbjct: 252 T-EDVKIFLHYNANKALMNLGFEALFPPEVCRVNPAILAALSPNSDENH--DFFSGAGSS 308 Query: 116 YQ--QGAELKWD 125 Y + D Sbjct: 309 YVIGKAVATTDD 320 >gi|184201049|ref|YP_001855256.1| ribonucleoside-diphosphate reductase beta subunit [Kocuria rhizophila DC2201] gi|183581279|dbj|BAG29750.1| ribonucleoside-diphosphate reductase beta subunit [Kocuria rhizophila DC2201] Length = 326 Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 55/139 (39%), Gaps = 23/139 (16%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + ++ +E + + +L E E+AYA E + G Sbjct: 196 IRDEAVHGYYIGYKYQKGLLQESPQRQQELKDYTYDLLDELYENEVAYA-EALYDSV-GW 253 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI---------DLKKEKNFFET 111 ++++ + AN+ + +G E LF M++V + + +FF Sbjct: 254 T-EDVKKFLHYNANKALNNLGYEALFPRE------MTDVSPAILSSLSPNADENHDFFSG 306 Query: 112 RVTEYQQGAEL-----KWD 125 + Y G + WD Sbjct: 307 SGSSYVIGKAVNTEDEDWD 325 >gi|49475007|ref|YP_033048.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella henselae str. Houston-1] gi|49237812|emb|CAF27007.1| Ribonucleotide reductase beta-chain [Bartonella henselae str. Houston-1] Length = 324 Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 47/132 (35%), Gaps = 12/132 (9%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + KE + + +L + +E Y + +GL Sbjct: 194 IRDEAVHGYYIGYKFQLGFAKLDETKKKEVKDFAFNLLFDLYNIECKYTEDLY--DALGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++ + AN+ +G E LF NP +S D +FF + Sbjct: 252 T-EDVKIFLHYNANKALMNLGFEALFPSEVCRVNPAILAALSPNSDENH--DFFSGAGSS 308 Query: 116 YQ--QGAELKWD 125 Y + D Sbjct: 309 YVIGKAVATTDD 320 >gi|311992719|ref|YP_004009587.1| NrdB ribonucleotide reductase beta subunit [Acinetobacter phage Ac42] gi|298684502|gb|ADI96463.1| NrdB ribonucleotide reductase beta subunit [Acinetobacter phage Ac42] Length = 372 Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 11/125 (8%) Query: 3 DE-SLHLNFGIDVINQIKI-ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG--FV 58 DE +H + ++V+ ++ E+ + + K +L E EI +A G V Sbjct: 232 DEFEIHCEYRLEVLKELLASEHGQAAFAKLRPKMIKILKEVIESEITWAKFLFEDGQAIV 291 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEP-----LFKYTENPFPWMSEVIDLKKEKNF-FETR 112 G+NA Q+ F A G +F ENP P + I++ K +N ET Sbjct: 292 GMNADVLIQWALFNAKAVAQNFGFTEEELGFVFP-EENPMPHLESWININKTQNANQETV 350 Query: 113 VTEYQ 117 Y+ Sbjct: 351 NGAYK 355 >gi|323127635|gb|ADX24932.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 319 Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P + F++ +L++ E Y ++ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEAEQETFREWMYDLLYQLYENEEDYTK-SLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295 >gi|73663294|ref|YP_302075.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495809|dbj|BAE19130.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 322 Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 7/109 (6%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DES+H F ++ E + Q+ +L + E+AY H +GL A Sbjct: 194 DESIHGVFTGMDAQSLRNELSESEKLQADQEMYKLLDDLYKNEVAYTHSLYDD--IGL-A 250 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109 Y+++ N+ +G +P F+ E NP + +D + +FF Sbjct: 251 EDVLNYVRYNGNKALSNLGFDPYFEEREFNPI--IENALDTTTKNHDFF 297 >gi|92112513|ref|YP_572441.1| ribonucleotide-diphosphate reductase subunit beta [Chromohalobacter salexigens DSM 3043] gi|91795603|gb|ABE57742.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Chromohalobacter salexigens DSM 3043] Length = 326 Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 47/124 (37%), Gaps = 10/124 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + Q +E + + +L E E+ Y VGL Sbjct: 196 IRDEAVHGYYIGYKFQQALARESAERQQEIKDATFDLLLELYDNEVHYTESLYDD--VGL 253 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN--FFETRVTE 115 + ++ + AN+ +G EPLF NP + + E+N FF + Sbjct: 254 T-EEVKAFLHYNANKALMNLGYEPLFPGATEAVNPA--ILAALSPGAEENHDFFSGSGSS 310 Query: 116 YQQG 119 Y G Sbjct: 311 YVIG 314 >gi|327189837|gb|EGE56975.1| ribonucleoside-diphosphate reductase protein, beta subunit [Rhizobium etli CNPAF512] Length = 324 Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 50/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E Y E + G GL Sbjct: 194 IRDEAVHGYYIGYKFQRGLERLSEERRQEIKDFAFDLLLELYDNEARY-TEALYDGV-GL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF NP +S D +FF + Sbjct: 252 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 308 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 309 YVIGKAVATEDEDWD 323 >gi|312862767|ref|ZP_07723007.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus vestibularis F0396] gi|322516573|ref|ZP_08069487.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus vestibularis ATCC 49124] gi|311101627|gb|EFQ59830.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus vestibularis F0396] gi|322124843|gb|EFX96267.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus vestibularis ATCC 49124] Length = 320 Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P + F++ +L++ E Y ++ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQESFREWMYDLLYQLYENEELYTK-SLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDSANDVNPIV-MNGISTGTSNHDFF 295 >gi|228475302|ref|ZP_04060026.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus hominis SK119] gi|228270678|gb|EEK12092.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus hominis SK119] Length = 322 Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 7/109 (6%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DES+H F ++ E ++ ++ +L E E++Y H +GL Sbjct: 194 DESIHGVFTGLDAQSLRNELSENEKQKADKEMYKLLEELYKNEVSYTHMLYDD--IGLT- 250 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109 Y+Q+ N+ +G EP F+ E NP + +D + +FF Sbjct: 251 EDVLNYVQYNGNKALSNLGFEPYFEEKEFNPI--IENALDTSTKNHDFF 297 >gi|218709884|ref|YP_002417505.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio splendidus LGP32] gi|218322903|emb|CAV19080.1| Ribonucleoside-diphosphate reductase, beta subunit [Vibrio splendidus LGP32] Length = 323 Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 10/131 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + ++ +++ +E Y VGL Sbjct: 193 IRDEAIHGYYIGYKFQLAYQSLSEEEQARVKDEAYSLMFSLYEIETQYTESLY--DPVGL 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVI-DLKKEKNFFETRVTEY 116 + ++ + AN+ +G E LF NP M+ + + + +FF + Y Sbjct: 251 T-EDVKHFLHYNANKALMNLGFEALFPDELCQVNPAI-MAALSPNADENHDFFSGSGSSY 308 Query: 117 Q--QGAELKWD 125 + + D Sbjct: 309 VIGKAVATEDD 319 >gi|114766102|ref|ZP_01445111.1| ribonucleoside-diphosphate reductase, beta subunit protein [Pelagibaca bermudensis HTCC2601] gi|114541657|gb|EAU44698.1| ribonucleoside-diphosphate reductase, beta subunit protein [Roseovarius sp. HTCC2601] Length = 326 Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 54/135 (40%), Gaps = 16/135 (11%) Query: 1 MRDESLHLNFGIDVI-NQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59 +RDE++H + +++E+P +E + + +L E +E Y E +G Sbjct: 197 IRDEAVHGYYIGYKFQRGLELESPERR-QELKDYAFGLLFELYDIEARYTEELY--DGIG 253 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTE 115 L + ++ + AN+ +G E LF NP + + E +FF + Sbjct: 254 LT-EEVKAFLHYNANKALQNLGFEALFPPEAAEVNPA--ILAALSPDSENHDFFSGSGSS 310 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 311 YVIGRAVATEDDDWD 325 >gi|220912864|ref|YP_002488173.1| ribonucleotide-diphosphate reductase subunit beta [Arthrobacter chlorophenolicus A6] gi|219859742|gb|ACL40084.1| Ribonucleoside-diphosphate reductase [Arthrobacter chlorophenolicus A6] Length = 324 Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E+ Y H+ VGL Sbjct: 194 IRDEAVHGYYIGYKFQRALETVSEERRQEIKDYTFELLFELYENEVQYTHDLY--DGVGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115 A ++++ + AN+ +G E +F + NP +S D +FF + Sbjct: 252 -AEDVKKFLHYNANKALMNLGYEAMFPASVTDVNPAILSALSPNADENH--DFFSGSGSS 308 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 309 YVIGKAVNTEDEDWD 323 >gi|55821276|ref|YP_139718.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus thermophilus LMG 18311] gi|55823189|ref|YP_141630.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus thermophilus CNRZ1066] gi|116628014|ref|YP_820633.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus thermophilus LMD-9] gi|55737261|gb|AAV60903.1| ribonucleotide diphosphate reductase beta subunit [Streptococcus thermophilus LMG 18311] gi|55739174|gb|AAV62815.1| ribonucleotide diphosphate reductase beta subunit [Streptococcus thermophilus CNRZ1066] gi|116101291|gb|ABJ66437.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Streptococcus thermophilus LMD-9] gi|312278606|gb|ADQ63263.1| Ribonucleoside-diphosphate reductase class Ib beta subunit [Streptococcus thermophilus ND03] Length = 320 Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P + F++ +L++ E Y ++ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEKEQESFREWMYDLLYQLYENEELYTK-SLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDSANDVNPIV-MNGISTGTSNHDFF 295 >gi|324990559|gb|EGC22495.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus sanguinis SK353] Length = 319 Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y VG Sbjct: 188 IRDESVHGTYIGYKFQLSFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLY--DTVGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295 >gi|251782830|ref|YP_002997133.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391460|dbj|BAH81919.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 319 Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P + F++ +L++ E Y ++ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEAEQETFREWMYDLLYQLYENEENYTK-SLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295 >gi|324993305|gb|EGC25225.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus sanguinis SK405] gi|324995391|gb|EGC27303.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus sanguinis SK678] gi|325697177|gb|EGD39064.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus sanguinis SK160] gi|327461576|gb|EGF07907.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus sanguinis SK1] gi|327473300|gb|EGF18720.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus sanguinis SK408] Length = 319 Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y VG Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLY--DTVGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295 >gi|328543067|ref|YP_004303176.1| ribonucleoside-diphosphate reductase, beta subunit [polymorphum gilvum SL003B-26A1] gi|326412813|gb|ADZ69876.1| Ribonucleoside-diphosphate reductase, beta subunit [Polymorphum gilvum SL003B-26A1] Length = 325 Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 51/134 (38%), Gaps = 13/134 (9%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +++ + +E Y VGL Sbjct: 195 IRDEAVHGYYIGYKFQRGLETVSEAERQEIKDFAFSLMFDLYAIEAKYTESL--CDGVGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVI-DLKKEKNFFETRVTEY 116 + ++ + AN+ +G E LF NP M+ + + + +FF + Y Sbjct: 253 T-EDVKHFLHYNANKALMNLGYEALFPDAVCAVNPAI-MAALSPNADENHDFFSGSGSSY 310 Query: 117 QQGAEL-----KWD 125 G + WD Sbjct: 311 VIGKAVATEDEDWD 324 >gi|259417680|ref|ZP_05741599.1| ribonucleoside-diphosphate reductase, beta subunit [Silicibacter sp. TrichCH4B] gi|259346586|gb|EEW58400.1| ribonucleoside-diphosphate reductase, beta subunit [Silicibacter sp. TrichCH4B] Length = 325 Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 49/134 (36%), Gaps = 13/134 (9%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + KE + + +L + +E Y + +GL Sbjct: 195 IRDEAIHGYYIGYKFQRGMERLSEAERKELKDFAFGLLFDLYDIEARYTEQLY--DGLGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEY 116 + ++ + AN+ +G E LF NP M+ + E +FF + Y Sbjct: 253 T-EDVKNFLHYNANKALQNLGFEALFPEETCRVNPAI-MAALSPGSDENHDFFSGSGSSY 310 Query: 117 QQGAE-----LKWD 125 G WD Sbjct: 311 VIGKAEATEDEDWD 324 >gi|256015100|ref|YP_003105109.1| ribonucleotide-diphosphate reductase beta subunit [Brucella microti CCM 4915] gi|255997760|gb|ACU49447.1| ribonucleotide-diphosphate reductase beta subunit [Brucella microti CCM 4915] Length = 329 Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 10/127 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E+ Y E + G GL Sbjct: 199 IRDEAVHGYYIGHKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEALYDGV-GL 256 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF NP +S D +FF + Sbjct: 257 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 313 Query: 116 YQQGAEL 122 Y G + Sbjct: 314 YVIGKAV 320 >gi|227876446|ref|ZP_03994558.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus mulieris ATCC 35243] gi|269976014|ref|ZP_06183018.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus mulieris 28-1] gi|306817405|ref|ZP_07451150.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus mulieris ATCC 35239] gi|307700420|ref|ZP_07637459.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus mulieris FB024-16] gi|227842987|gb|EEJ53184.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus mulieris ATCC 35243] gi|269935842|gb|EEZ92372.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus mulieris 28-1] gi|304649846|gb|EFM47126.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus mulieris ATCC 35239] gi|307614405|gb|EFN93635.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus mulieris FB024-16] Length = 322 Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 50/126 (39%), Gaps = 10/126 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + E+ +E + + ++L + E+ Y +GL Sbjct: 192 IRDEAVHGYYIGYKFQVAMRESSSSRQEELRDYTYSLLTDLYDNEVLYTETLY--DTLGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN--FFETRVTE 115 ++++ + AN+ +G E LF E NP + + E+N FF + Sbjct: 250 T-EDVKKFLHYNANKALMNLGYEALFPPEEIDVNPA--ILAALSPAAEENHDFFSGSGSS 306 Query: 116 YQQGAE 121 Y G Sbjct: 307 YTIGTA 312 >gi|269794349|ref|YP_003313804.1| ribonucleoside-diphosphate reductase class Ib subunit beta [Sanguibacter keddieii DSM 10542] gi|269096534|gb|ACZ20970.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Sanguibacter keddieii DSM 10542] Length = 325 Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + E + + +L E E+ Y + VGL Sbjct: 195 IRDEAVHGYYIGYKYQKGLEKLSPAERDEMKAYTFELLFELYENEVQYTADLY--DGVGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF E NP +S D +FF + Sbjct: 253 T-EDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENH--DFFSGSGSS 309 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 310 YVIGKAVNTEDEDWD 324 >gi|328945482|gb|EGG39633.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus sanguinis SK1087] Length = 319 Score = 48.9 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y VG Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLY--DTVGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295 >gi|289167885|ref|YP_003446154.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus mitis B6] gi|288907452|emb|CBJ22289.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus mitis B6] Length = 321 Score = 48.9 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y E++ G G Sbjct: 189 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 247 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 296 >gi|314936969|ref|ZP_07844316.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus hominis subsp. hominis C80] gi|313655588|gb|EFS19333.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus hominis subsp. hominis C80] Length = 322 Score = 48.9 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 7/109 (6%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DES+H F ++ E ++ ++ +L E E++Y H +GL Sbjct: 194 DESIHGVFTGLDAQSLRNELSENEKQKADKEMYKLLEELYKNEVSYTHMLYDD--IGLT- 250 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109 Y+Q+ N+ +G EP F+ E NP + +D + +FF Sbjct: 251 EDVLNYVQYNGNKALSNLGFEPYFEEKEFNPI--IENALDTSTKNHDFF 297 >gi|260583950|ref|ZP_05851698.1| ribonucleoside-diphosphate reductase, beta subunit [Granulicatella elegans ATCC 700633] gi|260158576|gb|EEW93644.1| ribonucleoside-diphosphate reductase, beta subunit [Granulicatella elegans ATCC 700633] Length = 336 Score = 48.9 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 5/111 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + Q E P + + + E E+ Y VG Sbjct: 205 IRDESVHGTYTGYKFQQGYNELPLEEQETLKMWVYQLCLELYQNEVKYTQSIY--DQVGW 262 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF T M+ + +FF Sbjct: 263 T-EKVKVFIRYNANKALQNLGFDPLFPDTAEDVDPIVMNGISTGTSNHDFF 312 >gi|116253995|ref|YP_769833.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium leguminosarum bv. viciae 3841] gi|115258643|emb|CAK09747.1| putative ribonucleoside-diphosphate reductase beta subunit [Rhizobium leguminosarum bv. viciae 3841] Length = 324 Score = 48.9 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 50/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E Y E + G GL Sbjct: 194 IRDEAVHGYYIGYKFQRGLERLGDERKQEIKDFAFELLLELYDNEAKY-TEALYDGV-GL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF NP +S D +FF + Sbjct: 252 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 308 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 309 YVIGKAVATEDEDWD 323 >gi|119961248|ref|YP_948075.1| ribonucleotide-diphosphate reductase subunit beta [Arthrobacter aurescens TC1] gi|119948107|gb|ABM07018.1| ribonucleoside-diphosphate reductase beta chain [Arthrobacter aurescens TC1] Length = 324 Score = 48.9 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y H+ VGL Sbjct: 194 IRDEAVHGYYIGYKFQKGLEKVSEARKQEIKDYTFELLFELYENEVQYTHDLY--DGVGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115 A ++++ + AN+ +G E +F + NP +S D +FF + Sbjct: 252 -AEDVKKFLHYNANKALMNLGYEAMFPASVTDVNPAILSALSPNADENH--DFFSGSGSS 308 Query: 116 YQQGAELK 123 Y G + Sbjct: 309 YVIGKAVN 316 >gi|241206478|ref|YP_002977574.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860368|gb|ACS58035.1| Ribonucleoside-diphosphate reductase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 324 Score = 48.9 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 50/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E Y E + G GL Sbjct: 194 IRDEAVHGYYIGYKFQRGLERLGDERKQEIKDFAFELLLELYDNEAKY-TEALYDGV-GL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF NP +S D +FF + Sbjct: 252 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 308 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 309 YVIGKAVATEDEDWD 323 >gi|194015457|ref|ZP_03054073.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus pumilus ATCC 7061] gi|194012861|gb|EDW22427.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus pumilus ATCC 7061] Length = 329 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 52/123 (42%), Gaps = 7/123 (5%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +I + + S +L E E+AY + G VGL Sbjct: 200 IRDEAIHGVYVGLLAQEIYNRQTDDVRADLHEWSLGLLTELYENEVAYTDDVY--GAVGL 257 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118 A + ++++ AN+ +G + F NP + + K + +FF + Y++ Sbjct: 258 -AHDVKAFVRYNANKALMNLGFDAHFPDELVNPI--VINGLSTKTKAHDFFSMQGNGYKK 314 Query: 119 GAE 121 Sbjct: 315 ATV 317 >gi|86148040|ref|ZP_01066342.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp. MED222] gi|85834173|gb|EAQ52329.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp. MED222] Length = 320 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 10/131 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + ++ +++ +E Y VGL Sbjct: 190 IRDEAIHGYYIGYKFQLAYQSLSEEEQARVKDEAYSLMFSLYEIETQYTESLY--DPVGL 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVI-DLKKEKNFFETRVTEY 116 + ++ + AN+ +G E LF NP M+ + + + +FF + Y Sbjct: 248 T-EDVKHFLHYNANKALMNLGFEALFPDELCQVNPAI-MAALSPNADENHDFFSGSGSSY 305 Query: 117 Q--QGAELKWD 125 + + D Sbjct: 306 VIGKAVATEDD 316 >gi|332686050|ref|YP_004455824.1| ribonucleotide reductase of class Ib (aerobic), subunit beta [Melissococcus plutonius ATCC 35311] gi|332370059|dbj|BAK21015.1| ribonucleotide reductase of class Ib (aerobic), beta subunit [Melissococcus plutonius ATCC 35311] Length = 323 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + + E + +L+E E Y E +G Sbjct: 188 IRDESVHGTYIGYKFQRGFNGLEEQEQDELKNWMYDLLYELYENEEKYTEELY--DPLGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G+ PLF T NP M+ + +FF Sbjct: 246 T-EDVKIFLRYNANKALMNLGMNPLFPDTANDVNPIV-MNGISTGTSNHDFF 295 >gi|291092706|gb|ADD74390.1| ribonucleotide reductase small subunit [uncultured virus] Length = 181 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 6/47 (12%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY 48 RDE LH +F + + H+ K ++ EA E + Sbjct: 140 RDEGLHCDFACLLYTK------HIVHKLPNNVIYNIVREAVHAESIF 180 >gi|308068541|ref|YP_003870146.1| ribonucleoside-diphosphate reductase beta subunit (ribonucleotide reductase small subunit) [Paenibacillus polymyxa E681] gi|305857820|gb|ADM69608.1| Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide reductase small subunit) [Paenibacillus polymyxa E681] Length = 321 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 52/125 (41%), Gaps = 15/125 (12%) Query: 1 MRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET-MPK 55 +RDES+H ++ ++ E ++ Q +L E Y + P Sbjct: 191 LRDESIHGVYVGVLAQEIYAELAEEE----QRDLYQTLVGLLRYLHNNEEQYTEQIYTPI 246 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVT 114 G V + ++++ AN+ +G +PLF+ E NP + + + K+ +FF + Sbjct: 247 GLV----DDVKVFLRYNANKAMMNLGFDPLFEEEEVNPIVF-NGISTHTKQHDFFSKKGN 301 Query: 115 EYQQG 119 Y + Sbjct: 302 GYVRA 306 >gi|228476905|ref|ZP_04061550.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus salivarius SK126] gi|228251479|gb|EEK10624.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus salivarius SK126] Length = 319 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P + F++ +L++ E Y ++ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQESFREWMYDLLYQLYENEELYTK-SLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDSANDVNPIV-MNGISTGTSNHDFF 295 >gi|222153355|ref|YP_002562532.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus uberis 0140J] gi|222114168|emb|CAR42683.1| putative ribonucleoside-diphosphate reductase beta chain [Streptococcus uberis 0140J] Length = 319 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E + F++ +L++ E Y VG Sbjct: 188 IRDESVHGTYIGYKFQLGFNELSEDKQESFREWMYDLLYQLYENEEEYTKTLY--DPVGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295 >gi|322831489|ref|YP_004211516.1| Ribonucleoside-diphosphate reductase [Rahnella sp. Y9602] gi|321166690|gb|ADW72389.1| Ribonucleoside-diphosphate reductase [Rahnella sp. Y9602] Length = 327 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 53/135 (39%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + ++ ++++ ++ + EI Y E VG Sbjct: 197 IRDEAVHGYYIGYKFQKALALESEERQRQIKEQAFDLIQDLYDNEIRYTEELY--DGVGW 254 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++++ + AN+ +G E LF + NP +S D +FF + Sbjct: 255 S-EDVKKFLHYNANKALMNLGYEALFPASMADVNPAILSALSPNADENH--DFFSGSGSS 311 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 312 YVIGKAVNTEDEDWD 326 >gi|322389171|ref|ZP_08062732.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus parasanguinis ATCC 903] gi|321144076|gb|EFX39493.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus parasanguinis ATCC 903] Length = 321 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y E++ G G Sbjct: 190 IRDESVHGTYIGYKFQLGFNELPEDEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 248 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 297 >gi|256832970|ref|YP_003161697.1| Ribonucleoside-diphosphate reductase [Jonesia denitrificans DSM 20603] gi|256686501|gb|ACV09394.1| Ribonucleoside-diphosphate reductase [Jonesia denitrificans DSM 20603] Length = 325 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L+E E+AY E++ G GL Sbjct: 195 IRDEAVHGYYIGYKYQKGLEAVTPERREELKAYTFDLLYELYDNEVAY-TESLYDGV-GL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF E NP +S D +FF + Sbjct: 253 T-EDVKKFLRYNANKALLNLGYEALFPKDETDVNPAILSALSPNADENH--DFFSGSGSS 309 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 310 YVIGKAVNTEDEDWD 324 >gi|319947340|ref|ZP_08021573.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus australis ATCC 700641] gi|319746582|gb|EFV98842.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus australis ATCC 700641] Length = 319 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y E++ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295 >gi|307704819|ref|ZP_07641714.1| ribonucleoside-diphosphate reductase 2 subunit beta [Streptococcus mitis SK597] gi|307708708|ref|ZP_07645171.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus mitis NCTC 12261] gi|307709353|ref|ZP_07645811.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus mitis SK564] gi|307615282|gb|EFN94492.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus mitis NCTC 12261] gi|307619936|gb|EFN99054.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus mitis SK564] gi|307621648|gb|EFO00690.1| ribonucleoside-diphosphate reductase 2 subunit beta [Streptococcus mitis SK597] Length = 320 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y E++ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295 >gi|51247866|pdb|1UZR|A Chain A, Crystal Structure Of The Class Ib Ribonucleotide Reductase R2f-2 Subunit From Mycobacterium Tuberculosis gi|51247867|pdb|1UZR|B Chain B, Crystal Structure Of The Class Ib Ribonucleotide Reductase R2f-2 Subunit From Mycobacterium Tuberculosis gi|51247868|pdb|1UZR|C Chain C, Crystal Structure Of The Class Ib Ribonucleotide Reductase R2f-2 Subunit From Mycobacterium Tuberculosis Length = 296 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 6/95 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + E + + +L E E+ Y + VGL Sbjct: 194 IRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDLY--DEVGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP 92 ++++++ AN+ +G E LF E NP Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNP 285 >gi|322376536|ref|ZP_08051029.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus sp. M334] gi|321282343|gb|EFX59350.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus sp. M334] Length = 320 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y E++ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295 >gi|307706628|ref|ZP_07643435.1| ribonucleoside-diphosphate reductase 2, subunit beta [Streptococcus mitis SK321] gi|307618083|gb|EFN97243.1| ribonucleoside-diphosphate reductase 2, subunit beta [Streptococcus mitis SK321] Length = 320 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y E++ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295 >gi|322385107|ref|ZP_08058754.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus cristatus ATCC 51100] gi|321270731|gb|EFX53644.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus cristatus ATCC 51100] Length = 321 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y E++ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295 >gi|296393703|ref|YP_003658587.1| ribonucleoside-diphosphate reductase [Segniliparus rotundus DSM 44985] gi|296180850|gb|ADG97756.1| Ribonucleoside-diphosphate reductase [Segniliparus rotundus DSM 44985] Length = 334 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 54/135 (40%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + ++L + E+ Y + VGL Sbjct: 204 IRDEAVHGYYIGYKYQRGLQMSTPERREELKDFTFSLLFDLYENEVEYTQDLY--DPVGL 261 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF E NP +S D +FF + Sbjct: 262 T-EDVKKFLRYNANKALMNLGYEGLFPKDETAVNPAILSALSPNADENH--DFFSGSGSS 318 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 319 YVIGKAVATEDEDWD 333 >gi|311741200|ref|ZP_07715024.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium pseudogenitalium ATCC 33035] gi|311303370|gb|EFQ79449.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium pseudogenitalium ATCC 33035] Length = 329 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 54/135 (40%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + Q + E ++ + ++++ EI Y + +G Sbjct: 199 IRDEAVHGYYIGYKFQQAYKQLDEEHQAELKEYTFDLVYDLYDNEIDYTEDLYDD--LGW 256 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ + +G E LF E +P +S D +FF + Sbjct: 257 T-EDVKRFLRYNANKALNNLGFEGLFPADETRVSPAILSSLSPNADENH--DFFSGSGSS 313 Query: 116 YQQG-----AELKWD 125 Y G + WD Sbjct: 314 YVIGKAEDTTDDDWD 328 >gi|327468920|gb|EGF14392.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus sanguinis SK330] Length = 319 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P + ++ +L+ E Y VG Sbjct: 188 IRDESVHGTYIGYKFQLAFNELPEDEQNKLKEWMYDLLYTLYENEEGYTESLY--DTVGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295 >gi|309800432|ref|ZP_07694593.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus infantis SK1302] gi|308115948|gb|EFO53463.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus infantis SK1302] Length = 319 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ + +L+ E Y E++ G G Sbjct: 187 IRDESVHGTYIGYKFQLGFNELPEDEQEKLKDWMYDLLYTLYENEEGY-TESLYDGV-GW 244 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 245 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 294 >gi|183598095|ref|ZP_02959588.1| hypothetical protein PROSTU_01459 [Providencia stuartii ATCC 25827] gi|188020253|gb|EDU58293.1| hypothetical protein PROSTU_01459 [Providencia stuartii ATCC 25827] Length = 323 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 53/139 (38%), Gaps = 23/139 (16%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + ++ KE + + ++L + E+ Y E VG Sbjct: 193 IRDEAIHGYYIGYKFQKSLLKYDEKTQKEIKDFTFSLLFDLYENEVNYTQELY--DTVGW 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI---------DLKKEKNFFET 111 ++++ + AN+ +G E LF +++V D + +FF Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPDV------VTDVSPAILSALSPDANENHDFFSG 303 Query: 112 RVTEYQQGAELK-----WD 125 + Y G + WD Sbjct: 304 SGSSYVIGKAVSTEDDDWD 322 >gi|331266449|ref|YP_004326079.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus oralis Uo5] gi|326683121|emb|CBZ00739.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus oralis Uo5] Length = 320 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y E++ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295 >gi|293365329|ref|ZP_06612046.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus oralis ATCC 35037] gi|306825287|ref|ZP_07458629.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|307703869|ref|ZP_07640810.1| ribonucleoside-diphosphate reductase 2, subunit beta [Streptococcus oralis ATCC 35037] gi|315613100|ref|ZP_07888010.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus sanguinis ATCC 49296] gi|291316779|gb|EFE57215.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus oralis ATCC 35037] gi|304432723|gb|EFM35697.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|307622704|gb|EFO01700.1| ribonucleoside-diphosphate reductase 2, subunit beta [Streptococcus oralis ATCC 35037] gi|315314662|gb|EFU62704.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus sanguinis ATCC 49296] Length = 320 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y E++ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295 >gi|555172|gb|AAA46037.1| herpesvirus saimiri gene 60 homologue (aa 177 to 258); putative [Bovine herpesvirus 4] Length = 82 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 27/76 (35%), Gaps = 9/76 (11%) Query: 2 RDESLHLNFGIDVINQI--KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59 RDE LH + N + + PH+ + EA +E + G Sbjct: 13 RDELLHTRAAALLYNTMVSGADKPHML------WVHNLFKEAVEVEHEFI-LVKSSGVSA 65 Query: 60 LNAPSCEQYMQFIANR 75 +N +++ A+R Sbjct: 66 VNVDDIRSFLEATADR 81 >gi|94985875|ref|YP_605239.1| ribonucleotide-diphosphate reductase subunit beta [Deinococcus geothermalis DSM 11300] gi|94556156|gb|ABF46070.1| Ribonucleoside-diphosphate reductase [Deinococcus geothermalis DSM 11300] Length = 319 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 46/120 (38%), Gaps = 9/120 (7%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DE+LH ++ + + P + + + E E AY E VGL A Sbjct: 188 DEALHGSYVGLLFQERFAALPQGEQAAVRARFEQLAREFYENECAYTDEVY--AEVGL-A 244 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK--NFFETR-VTEYQQ 118 + ++++ N C +GLE LF E NP + I +FF + Y + Sbjct: 245 SEVKTFVRYNFNICCDNLGLERLFPEEEVNPL--VLNGIRATGGTTHDFFSIKGAGGYAK 302 >gi|312867164|ref|ZP_07727374.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus parasanguinis F0405] gi|311097293|gb|EFQ55527.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus parasanguinis F0405] Length = 321 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y E++ G G Sbjct: 190 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 248 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 297 >gi|306829459|ref|ZP_07462649.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus mitis ATCC 6249] gi|304428545|gb|EFM31635.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus mitis ATCC 6249] Length = 320 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y E++ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295 >gi|270292678|ref|ZP_06198889.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus sp. M143] gi|270278657|gb|EFA24503.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus sp. M143] Length = 322 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y E++ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295 >gi|304398691|ref|ZP_07380563.1| Ribonucleoside-diphosphate reductase [Pantoea sp. aB] gi|304353902|gb|EFM18277.1| Ribonucleoside-diphosphate reductase [Pantoea sp. aB] Length = 326 Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 48/128 (37%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + Q L +E QQ + +L E+AY VG Sbjct: 196 IRDEAVHGYYIGYKYQQALATADDLRREELQQFAYDLLLALYENEVAYTEALYAD--VGW 253 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++ + AN+ +G E LF NP +S D +FF + Sbjct: 254 -VEEVKTFLHYNANKALMNLGYEALFPAELTAVNPAILSALSPNADENH--DFFSGSGSS 310 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 311 YVMGKAVE 318 >gi|296876816|ref|ZP_06900864.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus parasanguinis ATCC 15912] gi|296432318|gb|EFH18117.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus parasanguinis ATCC 15912] Length = 321 Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y E++ G G Sbjct: 190 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 248 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 297 >gi|315641368|ref|ZP_07896443.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus italicus DSM 15952] gi|315482861|gb|EFU73382.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus italicus DSM 15952] Length = 321 Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + P E + +L E E Y E + +G Sbjct: 189 IRDESVHGTYIGYKFQLGFQALPEAEQAELKDWMYGLLFELYENEENYTDELYGE--IGW 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 A + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 247 -AEEVKTFLRYNANKALMNMGQDPLFPDSANDVNPIV-MNGISTGTSNHDFF 296 >gi|309786253|ref|ZP_07680881.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella dysenteriae 1617] gi|308925998|gb|EFP71477.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella dysenteriae 1617] Length = 301 Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 168 IRDEAVHGYYIGYKYQKSLEKISEAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 225 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115 A + ++ + AN+ +G EPLF NP + + ++N FF + Sbjct: 226 -ADDVKTFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSSSS 282 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 283 YVMGKAVE 290 >gi|82778048|ref|YP_404397.1| ribonucleotide-diphosphate reductase subunit beta [Shigella dysenteriae Sd197] gi|81242196|gb|ABB62906.1| ribonucleoside-diphosphate reductase 2, beta chain [Shigella dysenteriae Sd197] Length = 322 Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKSLEKISEAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115 A + ++ + AN+ +G EPLF NP + + ++N FF + Sbjct: 247 -ADDVKTFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSSSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|121602770|ref|YP_988676.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella bacilliformis KC583] gi|120614947|gb|ABM45548.1| ribonucleoside-diphosphate reductase, beta subunit [Bartonella bacilliformis KC583] Length = 324 Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 10/127 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + ML + +E Y + +GL Sbjct: 194 IRDEAIHGYYIGYKFQLGFAKLNEAQKQEMKDFTFNMLFDLYNIECKYTEDLY--DSLGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++ + AN+ +G E LF NP +S D +FF + Sbjct: 252 T-EDVKVFLHYNANKALMNLGFESLFPSEVCRVNPAILAALSPNSDENH--DFFSGSGSS 308 Query: 116 YQQGAEL 122 Y G + Sbjct: 309 YVIGKAV 315 >gi|324525159|gb|ADY48515.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum] Length = 240 Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 7/43 (16%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLL 44 RDE LH +F + IK K Q++ ++ EA L Sbjct: 205 RDEGLHRDFACLLYKYIKH-------KPSQEQVYEIIKEAVSL 240 >gi|329117318|ref|ZP_08246035.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus parauberis NCFD 2020] gi|326907723|gb|EGE54637.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus parauberis NCFD 2020] Length = 321 Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E ++F++ +L++ E Y VG Sbjct: 188 IRDESVHGTYIGYKFQLGFNELSEEKQEDFKEWMYDLLYQLYENEENYTKSLY--DQVGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295 >gi|328958552|ref|YP_004375938.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium sp. 17-4] gi|328674876|gb|AEB30922.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium sp. 17-4] Length = 318 Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 10/114 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P + +L + E+AY E +G+ Sbjct: 188 IRDESVHGTYLGYKFQLTYNELPEEEQNKLLDWMYPLLEDLMENELAYTEEIYSH--IGI 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEK-NFF 109 A + ++++ AN+ +G + + NP + I ++ +FF Sbjct: 246 -AEDVKTFVRYNANKSLQNMGFPAYYDNADLADVNPI--VMNGISIETSNHDFF 296 >gi|319406095|emb|CBI79725.1| ribonucleoside-diphosphate reductase beta chain [Bartonella sp. AR 15-3] Length = 324 Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 10/127 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L + +E Y + +GL Sbjct: 194 IRDEAVHGYYIGYKFQLGFAKLHEAKKQEIKDFAFNILFDLYNIECKYTEDLY--DAIGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++ + AN+ +G E LF NP +S D +FF + Sbjct: 252 T-EDVKVFLHYNANKALMNLGFEALFPPEVCRVNPAILAALSPNSDENH--DFFSGSGSS 308 Query: 116 YQQGAEL 122 Y G + Sbjct: 309 YVIGKAV 315 >gi|111023403|ref|YP_706375.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus jostii RHA1] gi|110822933|gb|ABG98217.1| ribonucleotide reductase [Rhodococcus jostii RHA1] Length = 321 Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + + + +L E E+ Y + VGL Sbjct: 191 IRDEAVHGYYIGYKYQKGLEQLTEAERDDLKNYTFELLFELYDNEVDYTQDLY--DEVGL 248 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF E NP +S D +FF + Sbjct: 249 T-EDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENH--DFFSGSGSS 305 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 306 YVIGKAVNTEDEDWD 320 >gi|67008229|emb|CAH18519.1| ribonucleoside-dihosphate reductase beta chain [Rhodobacteraceae bacterium 198] Length = 325 Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 49/134 (36%), Gaps = 13/134 (9%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + KE + + +L + +E Y + +GL Sbjct: 195 IRDEAIHGYYIGYKFQRGLERVSEAERKEIKDFAFALLFDLYDIEARYTEQLY--DGLGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEY 116 + ++ + AN+ +G E LF NP M+ + E +FF + Y Sbjct: 253 T-EDVKNFLHYNANKALQNLGFEALFPDESCRVNPAI-MAALSPGSDENHDFFSGSGSSY 310 Query: 117 QQGAE-----LKWD 125 G WD Sbjct: 311 VIGKAEATEDEDWD 324 >gi|226365904|ref|YP_002783687.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus opacus B4] gi|226244394|dbj|BAH54742.1| ribonucleoside-diphosphate reductase beta chain [Rhodococcus opacus B4] Length = 321 Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + + + +L E E+ Y + VGL Sbjct: 191 IRDEAVHGYYIGYKYQKGLEQLTEAERDDLKNYTFELLFELYDNEVDYTQDLY--DEVGL 248 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF E NP +S D +FF + Sbjct: 249 T-EDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENH--DFFSGSGSS 305 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 306 YVIGKAVNTEDEDWD 320 >gi|255324325|ref|ZP_05365446.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium tuberculostearicum SK141] gi|255298655|gb|EET77951.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium tuberculostearicum SK141] Length = 329 Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 54/135 (40%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + Q + E ++ + +L++ EI Y + +G Sbjct: 199 IRDEAVHGYYIGYKFQQAYKQLDEEHQAELKEYTFDLLYDLYDNEIDYTEDLYDD--LGW 256 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ + +G E LF E +P +S D +FF + Sbjct: 257 T-EDVKRFLRYNANKALNNLGFEGLFPADETRVSPAILSSLSPNADENH--DFFSGSGSS 313 Query: 116 YQQG-----AELKWD 125 Y G + WD Sbjct: 314 YVIGKAEDTTDDDWD 328 >gi|203454817|ref|YP_002225133.1| gp256 [Mycobacterium phage Myrna] gi|197311865|gb|ACH62223.1| gp256 [Mycobacterium phage Myrna] Length = 322 Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 51/132 (38%), Gaps = 12/132 (9%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E Y + G Sbjct: 192 IRDEAVHGYYIGYKFQKGLEKETKARQQELKDYTYELLFELFDNEQEYTQDLY--DATGQ 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN--FFETRVTE 115 ++++++ N+ +G + LF ++ NP + + ++N FF + Sbjct: 250 T-EDVKKFLRYNGNKALQNLGYDALFSRSDCDVNPA--ILSALSPGGDENHDFFSGSGST 306 Query: 116 Y--QQGAELKWD 125 Y +G + D Sbjct: 307 YVMAKGVVTEDD 318 >gi|212716021|ref|ZP_03324149.1| hypothetical protein BIFCAT_00933 [Bifidobacterium catenulatum DSM 16992] gi|212661388|gb|EEB21963.1| hypothetical protein BIFCAT_00933 [Bifidobacterium catenulatum DSM 16992] Length = 330 Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 10/130 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + E + + +L+E E+ Y VGL Sbjct: 200 IRDEAVHGYYIGYKYQKGLERVSEDKRGELRDYTYDLLNELYDNEVEYTRSLY--EPVGL 257 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115 E+++++ N+ +G LF NP +S D +FF + Sbjct: 258 T-QDVEKFLRYNGNKALMNLGYPALFPQEICDVNPSILAALSPNADENH--DFFSGSGSS 314 Query: 116 YQQGAELKWD 125 Y G ++ D Sbjct: 315 YVMGKSVETD 324 >gi|70727160|ref|YP_254076.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus haemolyticus JCSC1435] gi|68447886|dbj|BAE05470.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus haemolyticus JCSC1435] Length = 322 Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 7/109 (6%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DES+H F ++ E ++ ++ +L + E++Y H +GL+ Sbjct: 194 DESIHGVFTGLDAQSLRNELSENEKQKADKEMYKLLEDLYANEVSYTHMLYDD--IGLS- 250 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109 Y+Q+ N+ +G EP F+ E NP + +D + +FF Sbjct: 251 EDVLNYVQYNGNKALSNLGFEPYFEEKEFNPI--IENALDTTTKNHDFF 297 >gi|311064961|ref|YP_003971687.1| ribonucleoside-diphosphate reductase subunit beta NrdF [Bifidobacterium bifidum PRL2010] gi|310867281|gb|ADP36650.1| NrdF Ribonucleoside-diphosphate reductase beta chain [Bifidobacterium bifidum PRL2010] Length = 330 Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 10/130 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E ++ + +L+E E+ Y + VGL Sbjct: 200 IRDEAVHGYYIGYKYQRGLERVSDAKREEMREYTYNLLNELYDNEVEYTESLYER--VGL 257 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 E+++++ N+ +G LF NP +S D +FF + Sbjct: 258 T-DDVEKFLRYNGNKALMNLGYPALFPAEACDVNPAILAALSPNADENH--DFFSGSGSS 314 Query: 116 YQQGAELKWD 125 Y G + D Sbjct: 315 YVMGKAEETD 324 >gi|224283650|ref|ZP_03646972.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium bifidum NCIMB 41171] gi|310288088|ref|YP_003939347.1| Ribonucleoside-diphosphate reductase beta chain [Bifidobacterium bifidum S17] gi|313140805|ref|ZP_07802998.1| ribonucleoside-diphosphate reductase subunit beta [Bifidobacterium bifidum NCIMB 41171] gi|309252025|gb|ADO53773.1| Ribonucleoside-diphosphate reductase beta chain [Bifidobacterium bifidum S17] gi|313133315|gb|EFR50932.1| ribonucleoside-diphosphate reductase subunit beta [Bifidobacterium bifidum NCIMB 41171] Length = 330 Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 10/130 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E ++ + +L+E E+ Y + VGL Sbjct: 200 IRDEAVHGYYIGYKYQRGLERVSDAKREEMREYTYNLLNELYDNEVEYTESLYER--VGL 257 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 E+++++ N+ +G LF NP +S D +FF + Sbjct: 258 T-DDVEKFLRYNGNKALMNLGYPALFPAEACDVNPAILAALSPNADENH--DFFSGSGSS 314 Query: 116 YQQGAELKWD 125 Y G + D Sbjct: 315 YVMGKAEETD 324 >gi|329769048|ref|ZP_08260470.1| ribonucleoside-diphosphate reductase [Gemella sanguinis M325] gi|328839539|gb|EGF89115.1| ribonucleoside-diphosphate reductase [Gemella sanguinis M325] Length = 322 Score = 48.1 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 49/123 (39%), Gaps = 15/123 (12%) Query: 3 DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58 DE++H +F ++ + E +++ +L + E+ Y + + + Sbjct: 195 DETIHGSFTGFDAQEIFKTLTKEEQEKA----KKEMYKLLLDLYENELKYTQDIYGE--I 248 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEY 116 GL + Y+++ ANR +G F+ + NP + ++ + +FF + Y Sbjct: 249 GL-YDEVKDYVEYNANRALANLGYPGYFEDKDINPI--IENAMNTSTKNHDFFSVKGDGY 305 Query: 117 QQG 119 Sbjct: 306 VVS 308 >gi|322387902|ref|ZP_08061509.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus infantis ATCC 700779] gi|321141175|gb|EFX36673.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus infantis ATCC 700779] Length = 320 Score = 47.7 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ + +L+ E Y E++ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKDWMYDLLYTLYENEEGY-TESLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295 >gi|300859086|ref|YP_003784069.1| ribonucleoside-diphosphate reductase subunit beta [Corynebacterium pseudotuberculosis FRC41] gi|300686540|gb|ADK29462.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium pseudotuberculosis FRC41] gi|302206792|gb|ADL11134.1| Ribonucleoside-diphosphate reductase beta chain [Corynebacterium pseudotuberculosis C231] gi|302331346|gb|ADL21540.1| Ribonucleoside-diphosphate reductase beta chain [Corynebacterium pseudotuberculosis 1002] gi|308277038|gb|ADO26937.1| Ribonucleotide reductase, beta subunit [Corynebacterium pseudotuberculosis I19] Length = 328 Score = 47.7 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 55/133 (41%), Gaps = 11/133 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + Q E +E ++ + +L++ EI Y + +G Sbjct: 198 IRDEAVHGYYIGYKYQQAVREQTPERQEELKEYTFDLLYDLYDNEIQYTEDLYDD--LGW 255 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKN--FFETRVTEYQ 117 ++++++ AN+ + +G E LF E P + + ++N FF + Y Sbjct: 256 T-EDVKRFLRYNANKALNNLGYEGLFPADECKVSPAILSALSPNADENHDFFSGSGSSYV 314 Query: 118 QG-----AELKWD 125 G + WD Sbjct: 315 IGKAENTTDDDWD 327 >gi|320546423|ref|ZP_08040738.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus equinus ATCC 9812] gi|320448808|gb|EFW89536.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus equinus ATCC 9812] Length = 320 Score = 47.7 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E E + +L++ E Y VG Sbjct: 189 IRDESVHGTYIGYKFQLGFNELSEDKQDELRDWMYDLLYQLYENEENYTKSLY--DEVGW 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 247 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 296 >gi|49473850|ref|YP_031892.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella quintana str. Toulouse] gi|49239353|emb|CAF25686.1| Ribonucleotide reductase beta-chain [Bartonella quintana str. Toulouse] Length = 324 Score = 47.7 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 48/132 (36%), Gaps = 12/132 (9%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + S +L + +E Y + +GL Sbjct: 194 IRDEAVHGYYIGYKFQLGFAKLNESKKQEIKDFSFNLLFDLYNIECKYTEDLY--DALGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 252 T-EDVKVFLHYNANKALMNLGFEPLFPPEVCRVNPAILAALSPSSDENH--DFFSGAGSS 308 Query: 116 YQ--QGAELKWD 125 Y + D Sbjct: 309 YVIGKAVATTDD 320 >gi|308183791|ref|YP_003927923.1| ribonucleoside-diphosphate reductase beta subunit [Lactobacillus plantarum subsp. plantarum ST-III] gi|308047717|gb|ADO00260.1| ribonucleoside-diphosphate reductase beta subunit [Lactobacillus plantarum subsp. plantarum ST-III] Length = 242 Score = 47.7 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 8/113 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E K F++ +L + E A+ E +GL Sbjct: 112 IRDESVHGTYLGYKFQLGYNELSATEQKTFKKWMDELLDDLLENEFAFTEEVY--APIGL 169 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEKNFF 109 A +Q++ + AN+ +GLE F E NP M+ + +FF Sbjct: 170 -AEDVKQFVHYNANKALQNMGLESRFPNAEIKDINPIV-MNGISTETANHDFF 220 >gi|289178104|gb|ADC85350.1| Ribonucleoside-diphosphate reductase beta chain [Bifidobacterium animalis subsp. lactis BB-12] Length = 326 Score = 47.7 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 10/130 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + E + + +L+E E+ Y H VGL Sbjct: 196 IRDEAVHGYYIGYKYQKGLEMASDAKRAEMETYTYDLLNELYENEVEYTHSLY--DEVGL 253 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115 + E+++ + AN+ +G LF NP +S D +FF + Sbjct: 254 S-DDVEKFLHYNANKALMNLGYPALFPSEICDVNPAILAALSPNADENH--DFFSGSGSS 310 Query: 116 YQQGAELKWD 125 Y G + D Sbjct: 311 YVMGRAEETD 320 >gi|258423381|ref|ZP_05686272.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus A9635] gi|257846442|gb|EEV70465.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus A9635] Length = 323 Score = 47.7 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 7/109 (6%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DES+H F ++ E ++ Q+ +L++ L E +Y +G+ Sbjct: 194 DESIHGVFTGLDAQHLRNELSESEKQKADQEMYKLLNDLYLNEESYTKMLYDD--LGIT- 250 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109 Y+++ N+ +G EP F+ E NP + +D + +FF Sbjct: 251 EDVLNYVKYNGNKALSNLGFEPYFEEREFNPI--IENALDTTTKNHDFF 297 >gi|183601891|ref|ZP_02963260.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium animalis subsp. lactis HN019] gi|219682805|ref|YP_002469188.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium animalis subsp. lactis AD011] gi|241190381|ref|YP_002967775.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195787|ref|YP_002969342.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218776|gb|EDT89418.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium animalis subsp. lactis HN019] gi|219620455|gb|ACL28612.1| ribonucleoside-diphosphate reductase 2 beta chain [Bifidobacterium animalis subsp. lactis AD011] gi|240248773|gb|ACS45713.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250341|gb|ACS47280.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793368|gb|ADG32903.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium animalis subsp. lactis V9] Length = 321 Score = 47.3 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 10/130 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + E + + +L+E E+ Y H VGL Sbjct: 191 IRDEAVHGYYIGYKYQKGLEMASDAKRAEMETYTYDLLNELYENEVEYTHSLY--DEVGL 248 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115 + E+++ + AN+ +G LF NP +S D +FF + Sbjct: 249 S-DDVEKFLHYNANKALMNLGYPALFPSEICDVNPAILAALSPNADENH--DFFSGSGSS 305 Query: 116 YQQGAELKWD 125 Y G + D Sbjct: 306 YVMGRAEETD 315 >gi|329729655|gb|EGG66056.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus 21193] Length = 323 Score = 47.3 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 7/109 (6%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DES+H F ++ E ++ Q+ +L++ L E +Y +G+ Sbjct: 194 DESIHGVFTGLDAQHLRNELSESEKQKADQEMYKLLNDLYLNEESYTKMLYDD--LGIT- 250 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109 Y+++ N+ +G EP F+ E NP + +D + +FF Sbjct: 251 EDVLNYVKYNGNKALSNLGFEPYFEEREFNPI--IENALDTTTKNHDFF 297 >gi|190893561|ref|YP_001980103.1| ribonucleoside-diphosphate reductase, beta subunit [Rhizobium etli CIAT 652] gi|190698840|gb|ACE92925.1| ribonucleoside-diphosphate reductase protein, beta subunit [Rhizobium etli CIAT 652] Length = 324 Score = 47.3 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + ++ + + +L E E Y E + G +GL Sbjct: 194 IRDEAVHGYYIGYKFQRGLERLSEERRQQIKDFAFDLLLELYDNEARY-TEALYDG-LGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF NP +S D +FF + Sbjct: 252 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 308 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 309 YVIGKAVATEDEDWD 323 >gi|15923722|ref|NP_371256.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus Mu50] gi|15926409|ref|NP_373942.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus N315] gi|21282423|ref|NP_645511.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus MW2] gi|49482989|ref|YP_040213.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus MRSA252] gi|49485604|ref|YP_042825.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus MSSA476] gi|57651569|ref|YP_185668.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus COL] gi|82750436|ref|YP_416177.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus RF122] gi|87162072|ref|YP_493420.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194508|ref|YP_499303.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148267192|ref|YP_001246135.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus JH9] gi|150393241|ref|YP_001315916.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus JH1] gi|151220913|ref|YP_001331735.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus str. Newman] gi|156979060|ref|YP_001441319.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus Mu3] gi|161508997|ref|YP_001574656.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221141144|ref|ZP_03565637.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253315835|ref|ZP_04839048.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253731358|ref|ZP_04865523.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253732821|ref|ZP_04866986.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus TCH130] gi|255005523|ref|ZP_05144124.2| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257424852|ref|ZP_05601279.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus 55/2053] gi|257427520|ref|ZP_05603919.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus 65-1322] gi|257430151|ref|ZP_05606535.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus 68-397] gi|257432852|ref|ZP_05609212.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus E1410] gi|257435756|ref|ZP_05611804.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus M876] gi|257794947|ref|ZP_05643926.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus A9781] gi|258418263|ref|ZP_05682528.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus A9763] gi|258421560|ref|ZP_05684485.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus A9719] gi|258430755|ref|ZP_05688467.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus A9299] gi|258441753|ref|ZP_05691025.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus A8115] gi|258445806|ref|ZP_05693983.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus A6300] gi|258449617|ref|ZP_05697719.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus A6224] gi|258452940|ref|ZP_05700934.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus A5948] gi|258454017|ref|ZP_05701989.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus A5937] gi|262049516|ref|ZP_06022386.1| ribonucleotide-diphosphate reductase beta subunit [Staphylococcus aureus D30] gi|262052319|ref|ZP_06024522.1| ribonucleotide-diphosphate reductase beta subunit [Staphylococcus aureus 930918-3] gi|269202352|ref|YP_003281621.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus ED98] gi|282894500|ref|ZP_06302729.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus A8117] gi|282903362|ref|ZP_06311253.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus C160] gi|282905140|ref|ZP_06312998.1| ribonucleoside-diphosphate reductase beta subunit [Staphylococcus aureus subsp. aureus Btn1260] gi|282908118|ref|ZP_06315949.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910377|ref|ZP_06318181.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus WBG10049] gi|282913572|ref|ZP_06321361.1| ribonucleoside-diphosphate reductase 2, beta subunit [Staphylococcus aureus subsp. aureus M899] gi|282918525|ref|ZP_06326262.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus C427] gi|282922028|ref|ZP_06329725.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus A9765] gi|282923491|ref|ZP_06331171.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus C101] gi|282926597|ref|ZP_06334227.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus A10102] gi|283957564|ref|ZP_06375017.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus A017934/97] gi|284023753|ref|ZP_06378151.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus 132] gi|293500617|ref|ZP_06666468.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus 58-424] gi|293509565|ref|ZP_06668276.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus M809] gi|293524151|ref|ZP_06670838.1| ribonucleoside-diphosphate reductase 2, beta subunit [Staphylococcus aureus subsp. aureus M1015] gi|294849402|ref|ZP_06790145.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A9754] gi|295406453|ref|ZP_06816259.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A8819] gi|295427309|ref|ZP_06819944.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus subsp. aureus EMRSA16] gi|296275141|ref|ZP_06857648.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus MR1] gi|297208541|ref|ZP_06924970.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297245179|ref|ZP_06929053.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A8796] gi|297590338|ref|ZP_06948977.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus MN8] gi|300912633|ref|ZP_07130076.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus TCH70] gi|304381650|ref|ZP_07364299.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|4490610|emb|CAB38643.1| ribonucleotide reductase minor subunit [Staphylococcus aureus] gi|13700623|dbj|BAB41920.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus aureus subsp. aureus N315] gi|14246501|dbj|BAB56894.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus aureus subsp. aureus Mu50] gi|14329710|emb|CAC40668.1| ribonucleotide-diphosphate reductase beta chain [Staphylococcus aureus] gi|21203860|dbj|BAB94559.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus aureus subsp. aureus MW2] gi|49241118|emb|CAG39796.1| ribonucleoside-diphosphate reductase beta chain [Staphylococcus aureus subsp. aureus MRSA252] gi|49244047|emb|CAG42473.1| ribonucleoside-diphosphate reductase beta chain [Staphylococcus aureus subsp. aureus MSSA476] gi|57285755|gb|AAW37849.1| ribonucleoside-diphosphate reductase 2, beta subunit [Staphylococcus aureus subsp. aureus COL] gi|82655967|emb|CAI80371.1| ribonucelotide diphosphate reductase beta chain [Staphylococcus aureus RF122] gi|87128046|gb|ABD22560.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202066|gb|ABD29876.1| ribonucleotide-disphosphate reductase beta chain, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147740261|gb|ABQ48559.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Staphylococcus aureus subsp. aureus JH9] gi|149945693|gb|ABR51629.1| Ribonucleoside-diphosphate reductase [Staphylococcus aureus subsp. aureus JH1] gi|150373713|dbj|BAF66973.1| ribonucleotide-diphosphate reductase beta chain [Staphylococcus aureus subsp. aureus str. Newman] gi|156721195|dbj|BAF77612.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus aureus subsp. aureus Mu3] gi|160367806|gb|ABX28777.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253724883|gb|EES93612.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253729186|gb|EES97915.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus TCH130] gi|257272422|gb|EEV04545.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus 55/2053] gi|257275713|gb|EEV07186.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus 65-1322] gi|257279348|gb|EEV09949.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus 68-397] gi|257282267|gb|EEV12402.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus E1410] gi|257284947|gb|EEV15066.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus M876] gi|257788919|gb|EEV27259.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus A9781] gi|257839056|gb|EEV63535.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus A9763] gi|257842486|gb|EEV66910.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus A9719] gi|257849427|gb|EEV73397.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus A9299] gi|257852222|gb|EEV76149.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus A8115] gi|257855382|gb|EEV78320.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus A6300] gi|257857125|gb|EEV80024.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus A6224] gi|257859451|gb|EEV82305.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus A5948] gi|257863882|gb|EEV86638.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus A5937] gi|259159759|gb|EEW44800.1| ribonucleotide-diphosphate reductase beta subunit [Staphylococcus aureus 930918-3] gi|259162352|gb|EEW46924.1| ribonucleotide-diphosphate reductase beta subunit [Staphylococcus aureus D30] gi|262074642|gb|ACY10615.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus ED98] gi|269940309|emb|CBI48686.1| ribonucleoside-diphosphate reductase beta chain [Staphylococcus aureus subsp. aureus TW20] gi|282314359|gb|EFB44749.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus C101] gi|282317659|gb|EFB48031.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus C427] gi|282322604|gb|EFB52926.1| ribonucleoside-diphosphate reductase 2, beta subunit [Staphylococcus aureus subsp. aureus M899] gi|282325769|gb|EFB56077.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus WBG10049] gi|282327783|gb|EFB58065.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331965|gb|EFB61476.1| ribonucleoside-diphosphate reductase beta subunit [Staphylococcus aureus subsp. aureus Btn1260] gi|282591490|gb|EFB96562.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus A10102] gi|282593686|gb|EFB98678.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus A9765] gi|282596317|gb|EFC01278.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus C160] gi|282763213|gb|EFC03344.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus A8117] gi|283470026|emb|CAQ49237.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus ST398] gi|283791015|gb|EFC29830.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus A017934/97] gi|285816434|gb|ADC36921.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit [Staphylococcus aureus 04-02981] gi|290921114|gb|EFD98175.1| ribonucleoside-diphosphate reductase 2, beta subunit [Staphylococcus aureus subsp. aureus M1015] gi|291095622|gb|EFE25883.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus 58-424] gi|291467662|gb|EFF10177.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus M809] gi|294823934|gb|EFG40360.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A9754] gi|294968598|gb|EFG44621.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A8819] gi|295128697|gb|EFG58328.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus subsp. aureus EMRSA16] gi|296886796|gb|EFH25700.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297177850|gb|EFH37099.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A8796] gi|297576637|gb|EFH95352.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus MN8] gi|298694063|gb|ADI97285.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus subsp. aureus ED133] gi|300886879|gb|EFK82081.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus TCH70] gi|302332442|gb|ADL22635.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus JKD6159] gi|302750629|gb|ADL64806.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304339753|gb|EFM05698.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312438843|gb|ADQ77914.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus TCH60] gi|312829224|emb|CBX34066.1| ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide reductase small subunit) [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129414|gb|EFT85407.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus CGS03] gi|315194351|gb|EFU24743.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus CGS00] gi|315196404|gb|EFU26755.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus CGS01] gi|320139937|gb|EFW31798.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus MRSA131] gi|320141974|gb|EFW33802.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus MRSA177] gi|323438919|gb|EGA96654.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus O11] gi|323441867|gb|EGA99507.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus aureus O46] gi|329313453|gb|AEB87866.1| Ribonucleoside-diphosphate reductase class Ib beta subunit [Staphylococcus aureus subsp. aureus T0131] gi|329724628|gb|EGG61135.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus 21172] gi|329728537|gb|EGG64970.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus 21189] Length = 323 Score = 47.3 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 7/109 (6%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DES+H F ++ E ++ Q+ +L++ L E +Y +G+ Sbjct: 194 DESIHGVFTGLDAQHLRNELSESEKQKADQEMYKLLNDLYLNEESYTKMLYDD--LGIT- 250 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109 Y+++ N+ +G EP F+ E NP + +D + +FF Sbjct: 251 EDVLNYVKYNGNKALSNLGFEPYFEEREFNPI--IENALDTTTKNHDFF 297 >gi|282916074|ref|ZP_06323837.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus D139] gi|283769895|ref|ZP_06342787.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus H19] gi|282320022|gb|EFB50369.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus aureus subsp. aureus D139] gi|283460042|gb|EFC07132.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus aureus subsp. aureus H19] Length = 323 Score = 47.3 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 7/109 (6%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DES+H F ++ E ++ Q+ +L++ L E +Y +G+ Sbjct: 194 DESIHGVFTGLDAQHLRNELSESEKQKADQEMYKLLNDLYLNEESYTKMLYDD--LGIT- 250 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109 Y+++ N+ +G EP F+ E NP + +D + +FF Sbjct: 251 EDVLNYVKYNGNKALSNLGFEPYFEEREFNPI--IENALDTTTKNHDFF 297 >gi|148994532|ref|ZP_01823712.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pneumoniae SP9-BS68] gi|147927202|gb|EDK78238.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pneumoniae SP9-BS68] Length = 319 Score = 47.3 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y E++ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNMGQDPLFPDSAEDVNPIV-MNGISTGTSNHDFF 295 >gi|168489010|ref|ZP_02713209.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae SP195] gi|183572389|gb|EDT92917.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae SP195] gi|332073523|gb|EGI84002.1| ribonucleotide reductase, small chain family protein [Streptococcus pneumoniae GA17570] Length = 320 Score = 47.3 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y E++ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNMGQDPLFPDSAEDVNPIV-MNGISTGTSNHDFF 295 >gi|225860977|ref|YP_002742486.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pneumoniae Taiwan19F-14] gi|298229749|ref|ZP_06963430.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255394|ref|ZP_06978980.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502819|ref|YP_003724759.1| ribonucleoside-diphosphate reductase [Streptococcus pneumoniae TCH8431/19A] gi|225727952|gb|ACO23803.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae Taiwan19F-14] gi|298238414|gb|ADI69545.1| ribonucleoside-diphosphate reductase [Streptococcus pneumoniae TCH8431/19A] gi|327389423|gb|EGE87768.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Streptococcus pneumoniae GA04375] Length = 320 Score = 47.3 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y E++ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNMGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295 >gi|149013339|ref|ZP_01834070.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pneumoniae SP19-BS75] gi|147762929|gb|EDK69876.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pneumoniae SP19-BS75] Length = 320 Score = 47.3 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y E++ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNMGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295 >gi|15901045|ref|NP_345649.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pneumoniae TIGR4] gi|111657123|ref|ZP_01407908.1| hypothetical protein SpneT_02001649 [Streptococcus pneumoniae TIGR4] gi|14972661|gb|AAK75289.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus pneumoniae TIGR4] Length = 320 Score = 47.3 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y E++ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNMGQDPLFPDSAEDVNPIV-MNGISTGTSNHDFF 295 >gi|300741626|ref|ZP_07071647.1| ribonucleoside-diphosphate reductase, beta subunit [Rothia dentocariosa M567] gi|300380811|gb|EFJ77373.1| ribonucleoside-diphosphate reductase, beta subunit [Rothia dentocariosa M567] Length = 325 Score = 47.3 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 57/133 (42%), Gaps = 11/133 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + E ++ + +L+E E+AY H ++ G G Sbjct: 195 IRDEAVHGYYIGYKFQRGLAKESPERQAELKEYTFNLLYELYENEVAYTH-SLYDGV-GW 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKN--FFETRVTEYQ 117 + ++++ + AN+ +G E +F + N P + + ++N FF + Y Sbjct: 253 S-EDVKKFLHYNANKALMNLGYEAMFPASVTNVSPAILSALSPNADENHDFFSGSGSSYV 311 Query: 118 QGAEL-----KWD 125 G + WD Sbjct: 312 IGKAVNTEDEDWD 324 >gi|149004132|ref|ZP_01828935.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae SP14-BS69] gi|237649545|ref|ZP_04523797.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pneumoniae CCRI 1974] gi|237822455|ref|ZP_04598300.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pneumoniae CCRI 1974M2] gi|147757865|gb|EDK64875.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae SP14-BS69] Length = 320 Score = 47.3 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y E++ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNMGQDPLFPDSAEDVNPIV-MNGISTGTSNHDFF 295 >gi|15903110|ref|NP_358660.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pneumoniae R6] gi|116517162|ref|YP_816517.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pneumoniae D39] gi|148985789|ref|ZP_01818917.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae SP3-BS71] gi|148990437|ref|ZP_01821595.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae SP6-BS73] gi|148999044|ref|ZP_01826476.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae SP11-BS70] gi|149008157|ref|ZP_01831676.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pneumoniae SP18-BS74] gi|149026429|ref|ZP_01836566.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae SP23-BS72] gi|168483243|ref|ZP_02708195.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae CDC1873-00] gi|168486506|ref|ZP_02711014.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae CDC1087-00] gi|168491101|ref|ZP_02715244.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae CDC0288-04] gi|168493105|ref|ZP_02717248.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae CDC3059-06] gi|168577270|ref|ZP_02723064.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae MLV-016] gi|169833110|ref|YP_001694622.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pneumoniae Hungary19A-6] gi|182684087|ref|YP_001835834.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus pneumoniae CGSP14] gi|194397329|ref|YP_002037788.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pneumoniae G54] gi|225854653|ref|YP_002736165.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pneumoniae JJA] gi|225856856|ref|YP_002738367.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pneumoniae P1031] gi|225858968|ref|YP_002740478.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pneumoniae 70585] gi|303255568|ref|ZP_07341620.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pneumoniae BS455] gi|303260588|ref|ZP_07346554.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus pneumoniae SP-BS293] gi|303262722|ref|ZP_07348661.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus pneumoniae SP14-BS292] gi|303265256|ref|ZP_07351167.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus pneumoniae BS397] gi|303267603|ref|ZP_07353445.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus pneumoniae BS457] gi|303269940|ref|ZP_07355678.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus pneumoniae BS458] gi|307067834|ref|YP_003876800.1| ribonucleotide reductase subunit beta [Streptococcus pneumoniae AP200] gi|307127225|ref|YP_003879256.1| ribonucleoside-diphosphate reductase subunit beta [Streptococcus pneumoniae 670-6B] gi|15458689|gb|AAK99870.1| Nonessential ribonucleoside-diP reductase 2, subunit beta, class I, function unknown [Streptococcus pneumoniae R6] gi|116077738|gb|ABJ55458.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae D39] gi|147755114|gb|EDK62169.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae SP11-BS70] gi|147760396|gb|EDK67375.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pneumoniae SP18-BS74] gi|147922093|gb|EDK73216.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae SP3-BS71] gi|147924289|gb|EDK75383.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae SP6-BS73] gi|147929260|gb|EDK80261.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae SP23-BS72] gi|168995612|gb|ACA36224.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae Hungary19A-6] gi|172043347|gb|EDT51393.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae CDC1873-00] gi|182629421|gb|ACB90369.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus pneumoniae CGSP14] gi|183570430|gb|EDT90958.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae CDC1087-00] gi|183574343|gb|EDT94871.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae CDC0288-04] gi|183576617|gb|EDT97145.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae CDC3059-06] gi|183577169|gb|EDT97697.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae MLV-016] gi|194356996|gb|ACF55444.1| ribonucleoside-diphosphate reductase beta subunit [Streptococcus pneumoniae G54] gi|225720498|gb|ACO16352.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae 70585] gi|225724090|gb|ACO19943.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae JJA] gi|225725515|gb|ACO21367.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae P1031] gi|301794279|emb|CBW36700.1| putative ribonucleoside-diphosphate reductase beta chain [Streptococcus pneumoniae INV104] gi|301800116|emb|CBW32717.1| putative ribonucleoside-diphosphate reductase beta chain [Streptococcus pneumoniae OXC141] gi|301801954|emb|CBW34682.1| putative ribonucleoside-diphosphate reductase beta chain [Streptococcus pneumoniae INV200] gi|302597474|gb|EFL64568.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus pneumoniae BS455] gi|302636154|gb|EFL66650.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus pneumoniae SP14-BS292] gi|302638301|gb|EFL68770.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus pneumoniae SP-BS293] gi|302640522|gb|EFL70931.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus pneumoniae BS458] gi|302642869|gb|EFL73174.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus pneumoniae BS457] gi|302645227|gb|EFL75463.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus pneumoniae BS397] gi|306409371|gb|ADM84798.1| Ribonucleotide reductase, beta subunit [Streptococcus pneumoniae AP200] gi|306484287|gb|ADM91156.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pneumoniae 670-6B] gi|332074795|gb|EGI85267.1| ribonucleotide reductase, small chain family protein [Streptococcus pneumoniae GA41301] gi|332075112|gb|EGI85583.1| ribonucleotide reductase, small chain family protein [Streptococcus pneumoniae GA17545] gi|332200632|gb|EGJ14704.1| ribonucleotide reductase, small chain family protein [Streptococcus pneumoniae GA41317] gi|332201651|gb|EGJ15721.1| ribonucleotide reductase, small chain family protein [Streptococcus pneumoniae GA47368] gi|332203034|gb|EGJ17102.1| ribonucleotide reductase, small chain family protein [Streptococcus pneumoniae GA47901] Length = 320 Score = 47.3 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y E++ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNMGQDPLFPDSAEDVNPIV-MNGISTGTSNHDFF 295 >gi|260904342|ref|ZP_05912664.1| ribonucleotide-diphosphate reductase subunit beta [Brevibacterium linens BL2] Length = 326 Score = 47.3 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 52/132 (39%), Gaps = 12/132 (9%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + ++ E E+AY H+ VGL Sbjct: 196 IRDEAVHGYYIGYKYQKGLESQSEERKQELKDYTMNLMFELYENEVAYTHDLY--DSVGL 253 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 A C+ ++ + AN+ +G E +F NP +S D +FF + Sbjct: 254 -AEDCKMFLHYNANKALMNLGYEAMFPKEVTEVNPAILAALSPNSDENH--DFFSGSGSS 310 Query: 116 YQ--QGAELKWD 125 Y + + D Sbjct: 311 YVIGKAENTEDD 322 >gi|38234491|ref|NP_940258.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium diphtheriae NCTC 13129] gi|38200754|emb|CAE50457.1| ribonucleoside-diphosphate reductase beta chain 2 [Corynebacterium diphtheriae] Length = 341 Score = 47.0 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 48/141 (34%), Gaps = 20/141 (14%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-----K 55 +RD+++H + + P E + + ++ E +E AY + Sbjct: 204 LRDKAVHGYYSGYKYQRGLELKPERAN-EMAEFTYSLCDELLDMEKAYTADLYAPADQAN 262 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL------KKEKNFF 109 GL ++ + A++ +G EP ++ +S I + +FF Sbjct: 263 ALEGLTLDGVMSFVYYNADKALMNLGYEPAYEEQA---AHVSPEIIAALTPESNETHDFF 319 Query: 110 ETRVTEYQQGAELK-----WD 125 + Y G + WD Sbjct: 320 SGSGSAYIIGTAEETTEEDWD 340 >gi|306840845|ref|ZP_07473592.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp. BO2] gi|306289240|gb|EFM60489.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp. BO2] Length = 327 Score = 47.0 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 10/127 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E+ Y E + G GL Sbjct: 197 IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEALYDGV-GL 254 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF NP +S D +FF + Sbjct: 255 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 311 Query: 116 YQQGAEL 122 Y G + Sbjct: 312 YVIGKAV 318 >gi|222102712|ref|YP_002539751.1| ribonucleoside-diphosphate reductase 2 beta chain [Agrobacterium vitis S4] gi|221739313|gb|ACM40046.1| ribonucleoside-diphosphate reductase 2 beta chain [Agrobacterium vitis S4] Length = 329 Score = 47.0 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 50/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E Y E + G GL Sbjct: 199 IRDEAVHGYYIGYKFQRGLEPLSEEQRQETKDFAFDLLLELYDNEAKY-TEALYDGV-GL 256 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF NP +S D +FF + Sbjct: 257 T-EDVKKFLHYNANKALMNLGYEALFPPEACKVNPAILSALSPNADENH--DFFSGSGSS 313 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 314 YVIGKAVATEDEDWD 328 >gi|221231890|ref|YP_002511042.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus pneumoniae ATCC 700669] gi|220674350|emb|CAR68896.1| putative ribonucleoside-diphosphate reductase beta chain [Streptococcus pneumoniae ATCC 700669] Length = 320 Score = 47.0 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ ++ +L+ E Y E++ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNMGQDPLFPDSAEDVNPIV-MNGISTGTSNHDFF 295 >gi|261753311|ref|ZP_05997020.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis bv. 3 str. 686] gi|261743064|gb|EEY30990.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis bv. 3 str. 686] Length = 327 Score = 47.0 bits (111), Expect = 9e-04, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 10/127 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E+ Y E + G GL Sbjct: 197 IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEALYDGV-GL 254 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF NP +S D +FF + Sbjct: 255 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 311 Query: 116 YQQGAEL 122 Y G + Sbjct: 312 YVIGKAV 318 >gi|218680499|ref|ZP_03528396.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium etli CIAT 894] Length = 324 Score = 47.0 bits (111), Expect = 9e-04, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 49/135 (36%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E Y + VGL Sbjct: 194 IRDEAVHGYYIGYKFQRGLELLGEERRQELKDFAFDLLLELYDNEARYTEALYDR--VGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF NP +S D +FF + Sbjct: 252 T-EDVKEFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 308 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 309 YVIGKAVATEDEDWD 323 >gi|225686158|ref|YP_002734130.1| ribonucleotide-diphosphate reductase subunit beta [Brucella melitensis ATCC 23457] gi|256043236|ref|ZP_05446173.1| ribonucleotide-diphosphate reductase subunit beta [Brucella melitensis bv. 1 str. Rev.1] gi|256262715|ref|ZP_05465247.1| ribonucleotide reductase [Brucella melitensis bv. 2 str. 63/9] gi|260564448|ref|ZP_05834933.1| ribonucleotide reductase [Brucella melitensis bv. 1 str. 16M] gi|265989661|ref|ZP_06102218.1| ribonucleotide-diphosphate reductase subunit beta [Brucella melitensis bv. 1 str. Rev.1] gi|225642263|gb|ACO02176.1| Ribonucleoside-diphosphate reductase [Brucella melitensis ATCC 23457] gi|260152091|gb|EEW87184.1| ribonucleotide reductase [Brucella melitensis bv. 1 str. 16M] gi|263000330|gb|EEZ13020.1| ribonucleotide-diphosphate reductase subunit beta [Brucella melitensis bv. 1 str. Rev.1] gi|263092503|gb|EEZ16756.1| ribonucleotide reductase [Brucella melitensis bv. 2 str. 63/9] gi|326410495|gb|ADZ67559.1| ribonucleotide-diphosphate reductase subunit beta [Brucella melitensis M28] gi|326553787|gb|ADZ88426.1| ribonucleotide-diphosphate reductase subunit beta [Brucella melitensis M5-90] Length = 329 Score = 47.0 bits (111), Expect = 9e-04, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 10/127 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E+ Y E + G GL Sbjct: 199 IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEALYDGV-GL 256 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF NP +S D +FF + Sbjct: 257 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 313 Query: 116 YQQGAEL 122 Y G + Sbjct: 314 YVIGKAV 320 >gi|163844498|ref|YP_001622153.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis ATCC 23445] gi|163675221|gb|ABY39331.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 329 Score = 47.0 bits (111), Expect = 9e-04, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 10/127 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E+ Y E + G GL Sbjct: 199 IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEALYDGV-GL 256 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF NP +S D +FF + Sbjct: 257 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 313 Query: 116 YQQGAEL 122 Y G + Sbjct: 314 YVIGKAV 320 >gi|289804144|ref|ZP_06534773.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 130 Score = 47.0 bits (111), Expect = 9e-04, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 4/49 (8%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEI 46 RDE+LHL ++N ++ +++P + +E +Q+ + +A E Sbjct: 77 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEK 125 >gi|312865304|ref|ZP_07725532.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus downei F0415] gi|311099415|gb|EFQ57631.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus downei F0415] Length = 316 Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 10/114 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + Q E +FQ+ L E E AY E +GL Sbjct: 186 IRDESVHGTYLGYKFRQGFDELSPEDQADFQKWMYGFLDELLENEFAYTEEVYSD--IGL 243 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEK-NFF 109 + ++++ AN+ +G F+ NP + I ++ +FF Sbjct: 244 -EDDIKTFVKYNANKSLQNMGFGIYFENATANDVNPI--VMNGISIETANHDFF 294 >gi|297567587|ref|YP_003686558.1| hypothetical protein Mesil_3232 [Meiothermus silvanus DSM 9946] gi|297567764|ref|YP_003686735.1| hypothetical protein Mesil_3416 [Meiothermus silvanus DSM 9946] gi|296852036|gb|ADH65050.1| hypothetical protein Mesil_3232 [Meiothermus silvanus DSM 9946] gi|296852213|gb|ADH65227.1| hypothetical protein Mesil_3416 [Meiothermus silvanus DSM 9946] Length = 323 Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 9/123 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + Q+ P + R L + + LE AY E +G Sbjct: 189 LRDEAIHGVYVGMLAQQVYARLPEGEQSRLRTALREDLEKLSALEEAYTEELY--APIG- 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEY 116 ++ ++ A++ +G P F NP + I L+ + +FF T+ Y Sbjct: 246 RVEEVRRFCRYNADKALMNLGQPPYFGVRAEEVNPV--VLAGISLRTKNHDFFSTKGNGY 303 Query: 117 QQG 119 + Sbjct: 304 VKA 306 >gi|23500072|ref|NP_699512.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis 1330] gi|62317763|ref|YP_223616.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus bv. 1 str. 9-941] gi|83269749|ref|YP_419040.1| ribonucleotide-diphosphate reductase subunit beta [Brucella melitensis biovar Abortus 2308] gi|148558197|ref|YP_001257348.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ovis ATCC 25840] gi|161620390|ref|YP_001594276.1| ribonucleotide-diphosphate reductase subunit beta [Brucella canis ATCC 23365] gi|189023015|ref|YP_001932756.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus S19] gi|254691263|ref|ZP_05154517.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus bv. 6 str. 870] gi|254695435|ref|ZP_05157263.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus bv. 3 str. Tulya] gi|254699051|ref|ZP_05160879.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus bv. 2 str. 86/8/59] gi|254699599|ref|ZP_05161427.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis bv. 5 str. 513] gi|254706144|ref|ZP_05167972.1| ribonucleotide-diphosphate reductase subunit beta [Brucella pinnipedialis M163/99/10] gi|254711557|ref|ZP_05173368.1| ribonucleotide-diphosphate reductase subunit beta [Brucella pinnipedialis B2/94] gi|254712154|ref|ZP_05173965.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti M644/93/1] gi|254715225|ref|ZP_05177036.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti M13/05/1] gi|254720036|ref|ZP_05181847.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp. 83/13] gi|254732497|ref|ZP_05191075.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus bv. 4 str. 292] gi|256029807|ref|ZP_05443421.1| ribonucleotide-diphosphate reductase subunit beta [Brucella pinnipedialis M292/94/1] gi|256059454|ref|ZP_05449656.1| ribonucleotide-diphosphate reductase subunit beta [Brucella neotomae 5K33] gi|256157977|ref|ZP_05455895.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti M490/95/1] gi|256253064|ref|ZP_05458600.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti B1/94] gi|256256449|ref|ZP_05461985.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus bv. 9 str. C68] gi|260167086|ref|ZP_05753897.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp. F5/99] gi|260544998|ref|ZP_05820819.1| ribonucleotide reductase [Brucella abortus NCTC 8038] gi|260568371|ref|ZP_05838840.1| ribonucleotide reductase [Brucella suis bv. 4 str. 40] gi|260756870|ref|ZP_05869218.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus bv. 6 str. 870] gi|260760301|ref|ZP_05872649.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus bv. 4 str. 292] gi|260763541|ref|ZP_05875873.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus bv. 2 str. 86/8/59] gi|260882684|ref|ZP_05894298.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus bv. 9 str. C68] gi|261215815|ref|ZP_05930096.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus bv. 3 str. Tulya] gi|261216944|ref|ZP_05931225.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti M13/05/1] gi|261220160|ref|ZP_05934441.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti B1/94] gi|261313587|ref|ZP_05952784.1| ribonucleotide-diphosphate reductase subunit beta [Brucella pinnipedialis M163/99/10] gi|261319174|ref|ZP_05958371.1| ribonucleotide-diphosphate reductase subunit beta [Brucella pinnipedialis B2/94] gi|261319814|ref|ZP_05959011.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti M644/93/1] gi|261323425|ref|ZP_05962622.1| ribonucleotide-diphosphate reductase subunit beta [Brucella neotomae 5K33] gi|261750056|ref|ZP_05993765.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis bv. 5 str. 513] gi|261756480|ref|ZP_06000189.1| ribonucleotide reductase [Brucella sp. F5/99] gi|265985045|ref|ZP_06097780.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp. 83/13] gi|265986823|ref|ZP_06099380.1| ribonucleotide-diphosphate reductase subunit beta [Brucella pinnipedialis M292/94/1] gi|265996493|ref|ZP_06109050.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti M490/95/1] gi|297249809|ref|ZP_06933510.1| ribonucleoside-diphosphate reductase, beta subunit [Brucella abortus bv. 5 str. B3196] gi|306839412|ref|ZP_07472226.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp. NF 2653] gi|306845616|ref|ZP_07478185.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp. BO1] gi|23463663|gb|AAN33517.1| ribonucleoside-diphosphate reductase, beta subunit [Brucella suis 1330] gi|62197956|gb|AAX76255.1| NrdF, ribonucleoside-diphosphate reductase, beta subunit [Brucella abortus bv. 1 str. 9-941] gi|82940023|emb|CAJ13054.1| Ribonucleotide reductase [Brucella melitensis biovar Abortus 2308] gi|148369482|gb|ABQ62354.1| ribonucleoside-diphosphate reductase, beta subunit [Brucella ovis ATCC 25840] gi|161337201|gb|ABX63505.1| Ribonucleoside-diphosphate reductase [Brucella canis ATCC 23365] gi|189021589|gb|ACD74310.1| Ribonucleotide reductase [Brucella abortus S19] gi|260098269|gb|EEW82143.1| ribonucleotide reductase [Brucella abortus NCTC 8038] gi|260155036|gb|EEW90117.1| ribonucleotide reductase [Brucella suis bv. 4 str. 40] gi|260670619|gb|EEX57559.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus bv. 4 str. 292] gi|260673962|gb|EEX60783.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus bv. 2 str. 86/8/59] gi|260676978|gb|EEX63799.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus bv. 6 str. 870] gi|260872212|gb|EEX79281.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus bv. 9 str. C68] gi|260917422|gb|EEX84283.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus bv. 3 str. Tulya] gi|260918744|gb|EEX85397.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti B1/94] gi|260922033|gb|EEX88601.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti M13/05/1] gi|261292504|gb|EEX96000.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti M644/93/1] gi|261298397|gb|EEY01894.1| ribonucleotide-diphosphate reductase subunit beta [Brucella pinnipedialis B2/94] gi|261299405|gb|EEY02902.1| ribonucleotide-diphosphate reductase subunit beta [Brucella neotomae 5K33] gi|261302613|gb|EEY06110.1| ribonucleotide-diphosphate reductase subunit beta [Brucella pinnipedialis M163/99/10] gi|261736464|gb|EEY24460.1| ribonucleotide reductase [Brucella sp. F5/99] gi|261739809|gb|EEY27735.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis bv. 5 str. 513] gi|262550790|gb|EEZ06951.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti M490/95/1] gi|264659020|gb|EEZ29281.1| ribonucleotide-diphosphate reductase subunit beta [Brucella pinnipedialis M292/94/1] gi|264663637|gb|EEZ33898.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp. 83/13] gi|297173678|gb|EFH33042.1| ribonucleoside-diphosphate reductase, beta subunit [Brucella abortus bv. 5 str. B3196] gi|306273937|gb|EFM55764.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp. BO1] gi|306405535|gb|EFM61800.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp. NF 2653] Length = 329 Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 10/127 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E+ Y E + G GL Sbjct: 199 IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEALYDGV-GL 256 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF NP +S D +FF + Sbjct: 257 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 313 Query: 116 YQQGAEL 122 Y G + Sbjct: 314 YVIGKAV 320 >gi|322391986|ref|ZP_08065450.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus peroris ATCC 700780] gi|321145212|gb|EFX40609.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus peroris ATCC 700780] Length = 320 Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ + +L+ E Y VG Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPQDEQEKLKDWMYDLLYTLYENEEGYTESLY--DTVGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295 >gi|319891738|ref|YP_004148613.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit [Staphylococcus pseudintermedius HKU10-03] gi|317161434|gb|ADV04977.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit [Staphylococcus pseudintermedius HKU10-03] gi|323465093|gb|ADX77246.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus pseudintermedius ED99] Length = 320 Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 44/109 (40%), Gaps = 7/109 (6%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DES+H F ++ E ++ ++ +L + E +Y +GL Sbjct: 194 DESIHGVFTGLDAQSLRNELSESEKQKADKEMYQLLEDLYANEASYTRSLY--DPIGLTD 251 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109 Y+++ N+ +G EP F+ E +P + +D + +FF Sbjct: 252 DVMN-YVRYNGNKALSNLGFEPYFEEREFSPI--IENALDTSTKNHDFF 297 >gi|24379140|ref|NP_721095.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus mutans UA159] gi|290580850|ref|YP_003485242.1| putative ribonucleotide reductase small subunit [Streptococcus mutans NN2025] gi|24377045|gb|AAN58401.1|AE014910_5 putative ribonucleotide reductase, small subunit [Streptococcus mutans UA159] gi|254997749|dbj|BAH88350.1| putative ribonucleotide reductase small subunit [Streptococcus mutans NN2025] Length = 319 Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E EF+ +L++ E Y VG Sbjct: 188 IRDESVHGTYIGYKFQLGFNELSEEEQSEFRDWMYDLLYQLYENEELYTQTLY--DPVGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295 >gi|213855387|ref|ZP_03383627.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 160 Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 4/49 (8%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEI 46 RDE+LHL ++N ++ +++P + +E +Q+ + +A E Sbjct: 101 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEK 149 >gi|297570727|ref|YP_003696501.1| ribonucleoside-diphosphate reductase [Arcanobacterium haemolyticum DSM 20595] gi|296931074|gb|ADH91882.1| Ribonucleoside-diphosphate reductase [Arcanobacterium haemolyticum DSM 20595] Length = 324 Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 47/135 (34%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + Q E + ++L + E Y +GL Sbjct: 194 IRDEAVHGYYIGYKYQQAVKRASAERQAELMDYTYSLLEDLYENEEGYTESLY--DEMGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++++ AN+ +G E LF + NP +S D +FF + Sbjct: 252 T-EDVKMFLRYNANKALMNLGYEALFPADQTAVNPAILAALSPNADENH--DFFSGSGSS 308 Query: 116 YQQGAE-----LKWD 125 Y G WD Sbjct: 309 YVIGTAEATEDEDWD 323 >gi|254702722|ref|ZP_05164550.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis bv. 3 str. 686] Length = 335 Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 10/127 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E+ Y E + G GL Sbjct: 205 IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEALYDGV-GL 262 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF NP +S D +FF + Sbjct: 263 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 319 Query: 116 YQQGAEL 122 Y G + Sbjct: 320 YVIGKAV 326 >gi|17989274|ref|NP_541907.1| ribonucleotide-diphosphate reductase subunit beta [Brucella melitensis bv. 1 str. 16M] gi|17985137|gb|AAL54171.1| ribonucleoside-diphosphate reductase beta chain [Brucella melitensis bv. 1 str. 16M] Length = 335 Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 10/127 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E+ Y E + G GL Sbjct: 205 IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEALYDGV-GL 262 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF NP +S D +FF + Sbjct: 263 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 319 Query: 116 YQQGAEL 122 Y G + Sbjct: 320 YVIGKAV 326 >gi|225351964|ref|ZP_03742987.1| hypothetical protein BIFPSEUDO_03569 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157211|gb|EEG70550.1| hypothetical protein BIFPSEUDO_03569 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 330 Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 10/130 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + E + + +L+E E+ Y VGL Sbjct: 200 IRDEAVHGYYIGYKYQKGLELVSEDKRGELRDYTYDLLNELYDNEVEYTRSLY--EPVGL 257 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115 E+++++ N+ +G LF NP +S D +FF + Sbjct: 258 T-QDVEKFLRYNGNKALMNLGYPALFPQEICDVNPSILAALSPNADENH--DFFSGSGSS 314 Query: 116 YQQGAELKWD 125 Y G ++ D Sbjct: 315 YVMGKSVETD 324 >gi|145296522|ref|YP_001139343.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium glutamicum R] gi|140846442|dbj|BAF55441.1| hypothetical protein [Corynebacterium glutamicum R] Length = 334 Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 53/132 (40%), Gaps = 12/132 (9%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E ++ + +L++ E Y+ + +G Sbjct: 204 IRDEAVHGYYIGYKYQKAVAKETPERQEELKEYTFDLLYDLYDNETQYSEDLYDD--LGW 261 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----NPFPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ + +G E LF E N +S D +FF + Sbjct: 262 T-EDVKRFLRYNANKALNNLGYEGLFPADETKVSPNILSALSPNADENH--DFFSGSGSS 318 Query: 116 YQ--QGAELKWD 125 Y + + D Sbjct: 319 YVIGKAENTEDD 330 >gi|19553723|ref|NP_601725.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium glutamicum ATCC 13032] gi|62391364|ref|YP_226766.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium glutamicum ATCC 13032] gi|15430572|dbj|BAB64405.1| ribonucleoside diphosphate reductase [Corynebacterium glutamicum] gi|21325297|dbj|BAB99918.1| Ribonucleotide reductase beta subunit [Corynebacterium glutamicum ATCC 13032] gi|41326705|emb|CAF21187.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 2 BETA CHAIN [Corynebacterium glutamicum ATCC 13032] Length = 334 Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 53/132 (40%), Gaps = 12/132 (9%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E ++ + +L++ E Y+ + +G Sbjct: 204 IRDEAVHGYYIGYKYQKAVAKETPERQEELKEYTFDLLYDLYDNETQYSEDLYDD--LGW 261 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----NPFPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ + +G E LF E N +S D +FF + Sbjct: 262 T-EDVKRFLRYNANKALNNLGYEGLFPADETKVSPNILSALSPNADENH--DFFSGSGSS 318 Query: 116 YQ--QGAELKWD 125 Y + + D Sbjct: 319 YVIGKAENTEDD 330 >gi|319404590|emb|CBI78196.1| ribonucleoside-diphosphate reductase beta chain [Bartonella rochalimae ATCC BAA-1498] gi|319407580|emb|CBI81230.1| ribonucleoside-diphosphate reductase beta chain [Bartonella sp. 1-1C] Length = 324 Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 10/127 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L + +E Y + +GL Sbjct: 194 IRDEAVHGYYIGYKFQLGFAKLDEAKKQEIKDFAFNLLFDLYNIECKYTEDLY--DAIGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++ + AN+ +G E LF NP +S D +FF + Sbjct: 252 T-EDVKVFLHYNANKALMNLGFEALFPPEVCRVNPAILAALSPNSDENH--DFFSGSGSS 308 Query: 116 YQQGAEL 122 Y G + Sbjct: 309 YVIGKAV 315 >gi|225628773|ref|ZP_03786807.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti str. Cudo] gi|237817303|ref|ZP_04596295.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus str. 2308 A] gi|225616619|gb|EEH13667.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti str. Cudo] gi|237788116|gb|EEP62332.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus str. 2308 A] Length = 335 Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 10/127 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E+ Y E + G GL Sbjct: 205 IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEALYDGV-GL 262 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF NP +S D +FF + Sbjct: 263 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 319 Query: 116 YQQGAEL 122 Y G + Sbjct: 320 YVIGKAV 326 >gi|268590425|ref|ZP_06124646.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia rettgeri DSM 1131] gi|291314339|gb|EFE54792.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia rettgeri DSM 1131] Length = 323 Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 53/136 (38%), Gaps = 20/136 (14%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + KE + S ++L + E+ Y E VG Sbjct: 193 IRDEAIHGYYIGYKFQKSLAQYDENTQKEIKDFSFSLLFDLYENEVKYTQELY--DTVGW 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI---------DLKKEKNFFET 111 + ++++ + AN+ +G E LF T +++V D + +FF Sbjct: 251 S-EDVKKFLHYNANKALMNLGYEALFPDT------VTDVSAAILSALSPDANENHDFFSG 303 Query: 112 RVTEY--QQGAELKWD 125 + Y + + D Sbjct: 304 SGSSYIIGKAVSTEDD 319 >gi|119387083|ref|YP_918138.1| ribonucleotide-diphosphate reductase subunit beta [Paracoccus denitrificans PD1222] gi|119377678|gb|ABL72442.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Paracoccus denitrificans PD1222] Length = 329 Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 48/134 (35%), Gaps = 14/134 (10%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + +++ + +E Y E +GL Sbjct: 200 IRDEAVHGYYIGYKYQRGLERLGEAERAALKDFAFSLIFDLYDIEAKYTAELY--DGIGL 257 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEY 116 + ++ + AN+ +G E LF NP + + E +FF + Y Sbjct: 258 T-EDVKSFLHYNANKALQNLGYEALFPPQACEVNPA--ILAALSPDSENHDFFSGSGSSY 314 Query: 117 QQGAEL-----KWD 125 G + WD Sbjct: 315 VIGKAVATEDEDWD 328 >gi|294853320|ref|ZP_06793992.1| ribonucleoside-diphosphate reductase [Brucella sp. NVSL 07-0026] gi|294818975|gb|EFG35975.1| ribonucleoside-diphosphate reductase [Brucella sp. NVSL 07-0026] Length = 329 Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 10/127 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E+ Y E + G GL Sbjct: 199 IRDEAVHGYYIGYKFQRALEVLFEEKRQEIKDFAFELLLELYDNEVRY-TEALYDGV-GL 256 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF NP +S D +FF + Sbjct: 257 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 313 Query: 116 YQQGAEL 122 Y G + Sbjct: 314 YVIGKAV 320 >gi|225870271|ref|YP_002746218.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus equi subsp. equi 4047] gi|225699675|emb|CAW93380.1| putative ribonucleoside-diphosphate reductase beta chain [Streptococcus equi subsp. equi 4047] Length = 319 Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E + + +L++ E Y VG Sbjct: 188 IRDESVHGTYIGYKFQLGFNELSESEQESLRDWMYDLLYQLYENEEQYTKTLY--DEVGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295 >gi|258622932|ref|ZP_05717948.1| Ribonucleoside-diphosphate reductase subunit beta [Vibrio mimicus VM573] gi|258624605|ref|ZP_05719543.1| Ribonucleoside-diphosphate reductase subunit beta [Vibrio mimicus VM603] gi|262165762|ref|ZP_06033499.1| ribonucleotide reductase of class Ib (aerobic) beta subunit [Vibrio mimicus VM223] gi|262171415|ref|ZP_06039093.1| ribonucleotide reductase of class Ib (aerobic) beta subunit [Vibrio mimicus MB-451] gi|258583152|gb|EEW07963.1| Ribonucleoside-diphosphate reductase subunit beta [Vibrio mimicus VM603] gi|258584871|gb|EEW09604.1| Ribonucleoside-diphosphate reductase subunit beta [Vibrio mimicus VM573] gi|261892491|gb|EEY38477.1| ribonucleotide reductase of class Ib (aerobic) beta subunit [Vibrio mimicus MB-451] gi|262025478|gb|EEY44146.1| ribonucleotide reductase of class Ib (aerobic) beta subunit [Vibrio mimicus VM223] Length = 323 Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + + ++L + E +Y VGL Sbjct: 193 IRDEAVHGYYIGYKFQLAYRQLDEAQQAQIKDYAFSLLFDLYEAEASYTEFLY--DPVGL 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 251 T-EEVKHFLHYNANKALMNLGFEPLFPEEVCEVNPAILAALSPNADENH--DFFSGSGSS 307 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 308 YVIGQAVATQDEDWD 322 >gi|322374376|ref|ZP_08048890.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus sp. C300] gi|321279876|gb|EFX56915.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus sp. C300] Length = 320 Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P + ++ +L+ E Y E++ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQGKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295 >gi|315223183|ref|ZP_07865044.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus anginosus F0211] gi|315187615|gb|EFU21369.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus anginosus F0211] Length = 319 Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P + F++ +L+ E Y ET+ G G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQETFREWMYDLLYTLYENEEGY-TETLYDGV-GW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++++ AN+ +G + LF T NP M+ + +FF Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDSLFPDTADDVNPIV-MNGISTGTSNHDFF 295 >gi|225868773|ref|YP_002744721.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus equi subsp. zooepidemicus] gi|225702049|emb|CAW99658.1| putative ribonucleoside-diphosphate reductase beta chain [Streptococcus equi subsp. zooepidemicus] Length = 319 Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E + + +L++ E Y VG Sbjct: 188 IRDESVHGTYIGYKFQLGFNELSESEQESLRDWMYDLLYQLYENEEQYTKTLY--DEVGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295 >gi|332523715|ref|ZP_08399967.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus porcinus str. Jelinkova 176] gi|332314979|gb|EGJ27964.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus porcinus str. Jelinkova 176] Length = 319 Score = 46.2 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E + F++ +L++ E +Y VG Sbjct: 188 IRDESVHGTYIGYKFQLGFNELSEEEQESFREWMYDLLYQLYENEESYTKTLY--DQVGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 246 TDEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295 >gi|296140644|ref|YP_003647887.1| ribonucleoside-diphosphate reductase [Tsukamurella paurometabola DSM 20162] gi|296028778|gb|ADG79548.1| Ribonucleoside-diphosphate reductase [Tsukamurella paurometabola DSM 20162] Length = 334 Score = 46.2 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 50/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E Y VGL Sbjct: 204 IRDEAVHGYYIGYKYQRGLETESPQRREELKDYTFDLLMELYANEEDYTESLY--DEVGL 261 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++++++ AN+ +G E LF NP +S D +FF + Sbjct: 262 S-EDVKKFLRYNANKALMNLGYEALFPKDATDVNPAILSALSPNADENH--DFFSGSGSS 318 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 319 YVIGKAVNTEDEDWD 333 >gi|239833484|ref|ZP_04681812.1| ribonucleotide-diphosphate reductase subunit beta [Ochrobactrum intermedium LMG 3301] gi|239821547|gb|EEQ93116.1| ribonucleotide-diphosphate reductase subunit beta [Ochrobactrum intermedium LMG 3301] Length = 328 Score = 46.2 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 10/127 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E+ Y E + G GL Sbjct: 198 IRDEAVHGYYIGYKFQRGLERLNGEQKQEIKDFAFELLLELYDNEVRY-TEALYDGV-GL 255 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF NP +S D +FF + Sbjct: 256 T-EDVKKFLHYNANKALMNLGYEALFPADACKVNPAILSALSPNADENH--DFFSGSGSS 312 Query: 116 YQQGAEL 122 Y G + Sbjct: 313 YVIGKAV 319 >gi|32453719|ref|NP_861928.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage RB69] gi|32350538|gb|AAP76137.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage RB69] Length = 390 Score = 46.2 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 25/116 (21%) Query: 2 RDESLHL--------NF-----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY 48 RDE LHL NF + +K N T ++ + + Sbjct: 247 RDEQLHLRVLSTLSVNFNLVLMAMSGFKLLKNVNKKQLTFLWKLIVKY---------KEW 297 Query: 49 AHETMPKGF-VGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101 A G G+N S ++ ++ R Q GL P+ T++P+PW+ E ++ Sbjct: 298 AAHLFKDGTCPGINTQSMCAFVDYLTVSRMKQCGLPCPITDAPTKHPYPWIREYLN 353 >gi|312864696|ref|ZP_07724927.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus downei F0415] gi|311099823|gb|EFQ58036.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus downei F0415] Length = 319 Score = 46.2 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E EF+ +L++ E Y VG Sbjct: 188 IRDESVHGTYIGYKFQLGFNELSEEEQSEFRDWMYDLLYQLYENEELYTKTLY--DEVGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTADDVNPIV-MNGISTGTSNHDFF 295 >gi|212712928|ref|ZP_03321056.1| hypothetical protein PROVALCAL_04026 [Providencia alcalifaciens DSM 30120] gi|212684406|gb|EEB43934.1| hypothetical protein PROVALCAL_04026 [Providencia alcalifaciens DSM 30120] Length = 323 Score = 46.2 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 14/133 (10%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + E + + ++L + EI Y E VG Sbjct: 193 IRDEAIHGYYIGYKFQKALAHYSEQERNEIKDFTFSLLLDLYENEIKYTQELY--DGVGW 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114 + + ++ + AN+ +G E LF + +S I D + +FF + Sbjct: 251 S-EDVKSFLHYNANKALMNLGYEALFPDS---ITQVSPEILSALSPDANENHDFFSGSGS 306 Query: 115 EYQ--QGAELKWD 125 Y + + D Sbjct: 307 SYVIGKAVSTEDD 319 >gi|325963521|ref|YP_004241427.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Arthrobacter phenanthrenivorans Sphe3] gi|323469608|gb|ADX73293.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Arthrobacter phenanthrenivorans Sphe3] Length = 324 Score = 46.2 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E+ Y H+ VGL Sbjct: 194 IRDEAVHGYYIGYKFQRGLEAVSPERRQEIKDYTFELLFELYENEVQYTHDLY--DGVGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115 A ++++ + AN+ +G E +F + NP +S D +FF + Sbjct: 252 -AEDVKKFLHYNANKALMNLGYEAMFPASVTDVNPAILSALSPNADENH--DFFSGSGSS 308 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 309 YVIGKAVNTEDEDWD 323 >gi|313890786|ref|ZP_07824411.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pseudoporcinus SPIN 20026] gi|313120887|gb|EFR44001.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus pseudoporcinus SPIN 20026] Length = 319 Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E + F++ +L++ E Y VG Sbjct: 188 IRDESVHGTYIGYKFQLGFNELNEEEQESFREWMYDLLYQLYENEENYTKTLY--DQVGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 246 TDEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295 >gi|227504013|ref|ZP_03934062.1| ribonucleoside-diphosphate reductase [Corynebacterium striatum ATCC 6940] gi|227199407|gb|EEI79455.1| ribonucleoside-diphosphate reductase [Corynebacterium striatum ATCC 6940] Length = 329 Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 54/135 (40%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + E P +E + + +L+E EI Y + +G Sbjct: 199 IRDEAVHGYYIGYKFQNGYNELPAEKQEEIKGYTFDLLYELYDNEIDYTEDLY--DELGW 256 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ + +G E LF E +P +S D +FF + Sbjct: 257 T-EDVKRFLRYNANKALNNLGFEGLFPADETRVSPAILSSLSPNADENH--DFFSGSGSS 313 Query: 116 YQQG-----AELKWD 125 Y G + WD Sbjct: 314 YVIGKAEDTTDDDWD 328 >gi|312137650|ref|YP_004004986.1| ribonucleoside-diphosphate reductase beta subunit nrdf [Rhodococcus equi 103S] gi|311886989|emb|CBH46298.1| ribonucleoside-diphosphate reductase beta subunit NrdF [Rhodococcus equi 103S] Length = 322 Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 8/123 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + ++ + +L E+AYA + VG Sbjct: 192 IRDEAVHGYYIGYKCRKALERLDASARDAHRRYTYDLLETLYANEVAYAADLY--DEVGW 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEY 116 A YM+F AN+ +G EP+F +E NP +S + E +FF + Y Sbjct: 250 TAEVVS-YMRFNANKALANLGYEPMFPVSECQVNPAI-LSALDPGAGENHDFFSGSGSAY 307 Query: 117 QQG 119 G Sbjct: 308 VIG 310 >gi|300780546|ref|ZP_07090401.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium genitalium ATCC 33030] gi|300533532|gb|EFK54592.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium genitalium ATCC 33030] Length = 333 Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 3/90 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + E ++ + +L++ EI Y + +G Sbjct: 203 IRDEAVHGYYIGYKYQVGLRDESQQRQDELKEHAFDLLYDLYDNEIQYTEDLY--DPLGW 260 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90 ++++++ AN+ + +G E LF E Sbjct: 261 T-EDVKRFLRYNANKALNNLGYEGLFPVDE 289 >gi|227488208|ref|ZP_03918524.1| ribonucleoside-diphosphate reductase [Corynebacterium glucuronolyticum ATCC 51867] gi|227091778|gb|EEI27090.1| ribonucleoside-diphosphate reductase [Corynebacterium glucuronolyticum ATCC 51867] Length = 335 Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 51/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + +++ E + + + + E Y + +G Sbjct: 205 IRDEAVHGYYIGYKYQRMQDNLSQAEKDELKDYTYDLTLDLYDNEEQYTEDMY--DELGW 262 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ + +G E L+ E +P +S D +FF + Sbjct: 263 T-EDVKRFLRYNANKALNNLGYEALYPSDETRVSPAILSALSPNADENH--DFFSGSGSS 319 Query: 116 YQQGAE-----LKWD 125 Y GA WD Sbjct: 320 YVIGAVENTEDADWD 334 >gi|265993236|ref|ZP_06105793.1| ribonucleotide-diphosphate reductase subunit beta [Brucella melitensis bv. 3 str. Ether] gi|262764106|gb|EEZ10138.1| ribonucleotide-diphosphate reductase subunit beta [Brucella melitensis bv. 3 str. Ether] Length = 189 Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 10/127 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E+ Y E + G GL Sbjct: 59 IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEALYDGV-GL 116 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF NP +S D +FF + Sbjct: 117 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 173 Query: 116 YQQGAEL 122 Y G + Sbjct: 174 YVIGKAV 180 >gi|227542806|ref|ZP_03972855.1| ribonucleoside-diphosphate reductase [Corynebacterium glucuronolyticum ATCC 51866] gi|227181432|gb|EEI62404.1| ribonucleoside-diphosphate reductase [Corynebacterium glucuronolyticum ATCC 51866] Length = 335 Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 51/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + +++ E + + + + E Y + +G Sbjct: 205 IRDEAVHGYYIGYKYQRMQDNLSQAEKDELKDYTYDLTLDLYDNEEQYTEDMY--DELGW 262 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ + +G E L+ E +P +S D +FF + Sbjct: 263 T-EDVKRFLRYNANKALNNLGYEALYPSDETRVSPAILSALSPNADENH--DFFSGSGSS 319 Query: 116 YQQGAE-----LKWD 125 Y GA WD Sbjct: 320 YVIGAVENTEDADWD 334 >gi|256111767|ref|ZP_05452742.1| ribonucleotide-diphosphate reductase subunit beta [Brucella melitensis bv. 3 str. Ether] Length = 190 Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 10/127 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E+ Y E + G GL Sbjct: 60 IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEALYDGV-GL 117 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF NP +S D +FF + Sbjct: 118 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 174 Query: 116 YQQGAEL 122 Y G + Sbjct: 175 YVIGKAV 181 >gi|163867489|ref|YP_001608688.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella tribocorum CIP 105476] gi|161017135|emb|CAK00693.1| ribonucleoside-diphosphate reductase beta chain [Bartonella tribocorum CIP 105476] Length = 324 Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 47/132 (35%), Gaps = 12/132 (9%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L + +E Y + +GL Sbjct: 194 IRDEAVHGYYIGYKFQLGYAKLEEAKRQEVKDFAFNLLFDLYNIECKYTEDLY--DSLGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++ + AN+ +G E LF NP +S D +FF + Sbjct: 252 T-EDVKIFLHYNANKALMNLGFEALFPPEVCHVNPAILASLSPNSDENH--DFFSGAGSS 308 Query: 116 YQ--QGAELKWD 125 Y + D Sbjct: 309 YVIGKAVATTDD 320 >gi|296455120|ref|YP_003662264.1| ribonucleoside-diphosphate reductase [Bifidobacterium longum subsp. longum JDM301] gi|296184552|gb|ADH01434.1| Ribonucleoside-diphosphate reductase [Bifidobacterium longum subsp. longum JDM301] Length = 330 Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 10/130 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + Q + +L+E E+ Y + VGL Sbjct: 200 IRDEAVHGYYIGYKYQKGIAQLSDAERLDLQDYTYDLLNELYDNEVEYTQSLYDR--VGL 257 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115 E+++++ N+ +G LF NP +S D +FF + Sbjct: 258 T-DDVEKFLRYNGNKALMNLGYPALFPAEICDVNPAILASLSPNADENH--DFFSGSGSS 314 Query: 116 YQQGAELKWD 125 Y G + D Sbjct: 315 YVMGKAEETD 324 >gi|195977892|ref|YP_002123136.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974597|gb|ACG62123.1| ribonucleotide reductase of class Ib (aerobic) beta subunit NrdF [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 319 Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E + + +L++ E Y VG Sbjct: 188 IRDESVHGTYIGYKFQLGFNELSDSEQESLRDWMYDLLYQLYENEEQYTKTLY--DEVGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295 >gi|300932708|ref|ZP_07147964.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium resistens DSM 45100] Length = 331 Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 38/90 (42%), Gaps = 3/90 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + + + +E + + +L E E Y + +G Sbjct: 201 IRDESVHGYYIGYKYQRAMEQESAARQEELKDHTFDLLLELYDNEAQYTEDLY--DELGW 258 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90 ++++++ AN+ + +G E LF E Sbjct: 259 T-EDVKRFLRYNANKALNNLGYEGLFPADE 287 >gi|227502986|ref|ZP_03933035.1| ribonucleoside-diphosphate reductase [Corynebacterium accolens ATCC 49725] gi|306836783|ref|ZP_07469743.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium accolens ATCC 49726] gi|227076047|gb|EEI14010.1| ribonucleoside-diphosphate reductase [Corynebacterium accolens ATCC 49725] gi|304567329|gb|EFM42934.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium accolens ATCC 49726] Length = 329 Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 52/135 (38%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + Q + +E + + + E EI Y + +G Sbjct: 199 IRDEAVHGYYIGYKFQQEYKKLDEKRQEELKDYTFDLAFELYDNEIDYTEDLY--DELGW 256 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ + +G E LF E +P +S D +FF + Sbjct: 257 T-EDVKRFLRYNANKALNNLGFEGLFPADETRVSPAILSSLSPNADENH--DFFSGSGSS 313 Query: 116 YQQG-----AELKWD 125 Y G + WD Sbjct: 314 YVIGKAEDTTDDDWD 328 >gi|222081801|ref|YP_002541166.1| ribonucleotide-diphosphate reductase subunit beta [Agrobacterium radiobacter K84] gi|221726480|gb|ACM29569.1| ribonucleoside-diphosphate reductase [Agrobacterium radiobacter K84] Length = 329 Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 48/127 (37%), Gaps = 10/127 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E Y E + G GL Sbjct: 199 IRDEAVHGYYIGYKFQRGLERLSEEGRQEIKDFAFDLLLELYDNEAKY-TEALYDGV-GL 256 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF NP +S D +FF + Sbjct: 257 T-EDVKKFLHYNANKALMNLGYEALFPPEACKVNPAILSALSPNADENH--DFFSGSGSS 313 Query: 116 YQQGAEL 122 Y G + Sbjct: 314 YVIGKAV 320 >gi|311113720|ref|YP_003984942.1| ribonucleotide-diphosphate reductase subunit beta [Rothia dentocariosa ATCC 17931] gi|310945214|gb|ADP41508.1| ribonucleotide-diphosphate reductase subunit beta [Rothia dentocariosa ATCC 17931] Length = 325 Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 57/133 (42%), Gaps = 11/133 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + E ++ + +L+E E++Y H ++ G G Sbjct: 195 IRDEAVHGYYIGYKFQRGLAKESPERQAELKEYTFNLLYELYENEVSYTH-SLYDGV-GW 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKN--FFETRVTEYQ 117 + ++++ + AN+ +G E +F + N P + + ++N FF + Y Sbjct: 253 S-EDVKKFLHYNANKALMNLGYEAMFPASVTNVSPAILSALSPNADENHDFFSGSGSSYV 311 Query: 118 QGAEL-----KWD 125 G + WD Sbjct: 312 IGKAVNTEDEDWD 324 >gi|38234435|ref|NP_940202.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium diphtheriae NCTC 13129] gi|38200698|emb|CAE50394.1| ribonucleotide reductase beta-chain 1 [Corynebacterium diphtheriae] Length = 328 Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 42/91 (46%), Gaps = 5/91 (5%) Query: 1 MRDESLHLNFGIDVINQ-IKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59 +RDE++H + Q ++ E P E + + +L++ EI Y + +G Sbjct: 198 IRDEAVHGYYIGYKFQQALRKETPE-RQAELKGYTFDLLYDLYDNEIQYTEDLYDD--LG 254 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90 ++++++ AN+ + +G E LF E Sbjct: 255 WT-EDVKRFLRYNANKALNNLGYEALFPADE 284 >gi|116493227|ref|YP_804962.1| ribonucleotide-diphosphate reductase subunit beta [Pediococcus pentosaceus ATCC 25745] gi|116103377|gb|ABJ68520.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Pediococcus pentosaceus ATCC 25745] Length = 317 Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E +E + L++ E Y H VG Sbjct: 188 LRDESVHGTYIGYKFQLGLKELGENEQQEIKDWMYNFLYDLYDNEEKYVHTLY--DQVGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++ AN+ +G +PLF TE NP M+ + +FF Sbjct: 246 T-DEVLTFTRYNANKALMNLGQDPLFPDTEADVNPIV-MNGISTGTSNHDFF 295 >gi|86359305|ref|YP_471197.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium etli CFN 42] gi|86283407|gb|ABC92470.1| ribonucleoside-diphosphate reductase, beta subunit protein [Rhizobium etli CFN 42] Length = 324 Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E Y E + G GL Sbjct: 194 IRDEAVHGYYIGYKFQRGLETLSEERRQEIKYFAFDLLLELYDNEAKY-TEALYDGV-GL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++++ + AN+ +G E LF NP +S D +FF + Sbjct: 252 S-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 308 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 309 YVIGKAVATEDEDWD 323 >gi|295397900|ref|ZP_06807962.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus viridans ATCC 11563] gi|294973880|gb|EFG49645.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus viridans ATCC 11563] Length = 323 Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 47/115 (40%), Gaps = 13/115 (11%) Query: 1 MRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56 +RDES+H + NQ+ E ++ Q + ++L E E Y+ Sbjct: 192 LRDESVHGTYIGYKFQIAFNQLSKEE----QEDMQNWAFSLLFELYENEAKYSEYIYDD- 246 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVIDLKKEKNFF 109 +G + ++++ AN+ +G +PLF T + M+ + +FF Sbjct: 247 -LGWT-EDVKIFLRYNANKALQNLGFDPLFPDTADDVDPIVMNGISTGTSNHDFF 299 >gi|213693323|ref|YP_002323909.1| Ribonucleoside-diphosphate reductase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524784|gb|ACJ53531.1| Ribonucleoside-diphosphate reductase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320459505|dbj|BAJ70126.1| ribonucleotide-diphosphate reductase beta subunit [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 330 Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 10/130 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + Q + +L+E E+ Y + VGL Sbjct: 200 IRDEAVHGYYIGYKYQKGIAQLGDAERLDLQDYTYDLLNELYDNEVEYTQSLYDR--VGL 257 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115 E+++++ N+ +G LF NP +S D +FF + Sbjct: 258 T-DDVEKFLRYNGNKALMNLGYPALFPAEICDVNPAILASLSPNADENH--DFFSGSGSS 314 Query: 116 YQQGAELKWD 125 Y G + D Sbjct: 315 YVMGKAEETD 324 >gi|153010278|ref|YP_001371492.1| ribonucleotide-diphosphate reductase subunit beta [Ochrobactrum anthropi ATCC 49188] gi|151562166|gb|ABS15663.1| Ribonucleoside-diphosphate reductase [Ochrobactrum anthropi ATCC 49188] Length = 328 Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 10/127 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + + +L E E+ Y E + G GL Sbjct: 198 IRDEAVHGYYIGYKFQRGLERLNEEQKQAIKDFAFELLLELYDNEVRY-TEALYDGV-GL 255 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF NP +S D +FF + Sbjct: 256 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 312 Query: 116 YQQGAEL 122 Y G + Sbjct: 313 YVIGKAV 319 >gi|319441868|ref|ZP_07991024.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium variabile DSM 44702] Length = 332 Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 37/90 (41%), Gaps = 3/90 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + ++ + E Y + +G Sbjct: 202 IRDEAVHGYYIGYKYQRALEHETEARRQELKDHTFELVFDLYDNECQYTEDLYDD--LGW 259 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90 ++++++ AN+ + +G E LF E Sbjct: 260 T-EDVKRFLRYNANKALNNLGYEGLFPVDE 288 >gi|270291189|ref|ZP_06197412.1| ribonucleoside-diphosphate reductase, beta subunit [Pediococcus acidilactici 7_4] gi|304385474|ref|ZP_07367819.1| ribonucleotide-diphosphate reductase subunit beta [Pediococcus acidilactici DSM 20284] gi|270280585|gb|EFA26420.1| ribonucleoside-diphosphate reductase, beta subunit [Pediococcus acidilactici 7_4] gi|304328681|gb|EFL95902.1| ribonucleotide-diphosphate reductase subunit beta [Pediococcus acidilactici DSM 20284] Length = 317 Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + + +E + L++ E Y H+ VG Sbjct: 188 LRDESVHGTYIGYKFQLGMKDLGENEQQELKDWMYNFLYDLYANEEKYVHKVY--DQVGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + ++ AN+ +G +PLF TE NP M+ + +FF Sbjct: 246 T-EEVLTFTRYNANKALMNLGQDPLFPDTEADVNPIV-MNGISTGTSNHDFF 295 >gi|86156146|gb|ABC86791.1| ribonucleotide reductase beta subunit [Borrelia turicatae] Length = 321 Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 17/126 (13%) Query: 1 MRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56 +RDES+H F + N++ KE + +L LE AY + Sbjct: 192 LRDESVHGVFVGLLAQEEFNKMTSREQEFAYKE----AMFILDRLYDLEKAYTKDLYSS- 246 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETR 112 +GL + + ++++ A++ +G EP F + NP + + + +FF T+ Sbjct: 247 -IGLESA-VDVFVRYNADKALMNLGFEPTFNIQDIDVNPL--VLNGLRTDTKTHDFFSTK 302 Query: 113 VTEYQQ 118 Y + Sbjct: 303 GNGYIK 308 >gi|326381484|ref|ZP_08203178.1| Ribonucleoside-diphosphate reductase [Gordonia neofelifaecis NRRL B-59395] gi|326199731|gb|EGD56911.1| Ribonucleoside-diphosphate reductase [Gordonia neofelifaecis NRRL B-59395] Length = 333 Score = 45.4 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 56/136 (41%), Gaps = 17/136 (12%) Query: 1 MRDESLHLNFGIDVI-NQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59 +RDE++H + ++++ P +E + + +L E E Y E + G Sbjct: 203 IRDEAVHGYYIGYKYQRGLEVQTPERR-QELKDYTFELLFELYDNETDY-TEALYDEV-G 259 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVT 114 L+ ++++++ AN+ +G E +F E NP +S D +FF + Sbjct: 260 LS-EDVKKFLRYNANKALMNLGYEAMFPKDETDVNPAILSALSPNADENH--DFFSGSGS 316 Query: 115 EYQQGAEL-----KWD 125 Y G + WD Sbjct: 317 SYVIGKAVNTEDEDWD 332 >gi|260579705|ref|ZP_05847564.1| ribonucleoside-diphosphate reductase R2-2, beta subunit [Corynebacterium jeikeium ATCC 43734] gi|258602135|gb|EEW15453.1| ribonucleoside-diphosphate reductase R2-2, beta subunit [Corynebacterium jeikeium ATCC 43734] Length = 331 Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 5/91 (5%) Query: 1 MRDESLHLNFGIDVI-NQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59 +RDES+H + ++ E P +E ++ + +L E E Y + +G Sbjct: 201 IRDESVHGYYIGYKYQRALENETPE-RQEELKEHTFDLLLELYDNEAQYTEDLY--DELG 257 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90 ++++++ AN+ + +G E LF E Sbjct: 258 WT-EDVKRFLRYNANKALNNLGYEGLFPADE 287 >gi|23465253|ref|NP_695856.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium longum NCC2705] gi|23325884|gb|AAN24492.1| ribonucleoside-diphosphate reductase 2 beta chain [Bifidobacterium longum NCC2705] Length = 330 Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 10/130 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + Q + +L+E E+ Y VGL Sbjct: 200 IRDEAVHGYYIGYKYQKGIAQLSDAERLDLQDYTYDLLNELYDNEVEYTQSLYDC--VGL 257 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115 E+++++ N+ +G LF NP +S D +FF + Sbjct: 258 T-DDVEKFLRYNGNKALMNLGYPALFPAEICDVNPAILAALSPNADENH--DFFSGSGSS 314 Query: 116 YQQGAELKWD 125 Y G + D Sbjct: 315 YVMGKAEETD 324 >gi|269217712|ref|ZP_06161566.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp. oral taxon 848 str. F0332] gi|269212647|gb|EEZ78987.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp. oral taxon 848 str. F0332] Length = 325 Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 50/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + E Q+ + +++ + E Y +GL Sbjct: 195 IRDEAVHGYYIGYKYQKALAKASQERRDELQEYAYSLVMDLYDNEELYTESLY--DEMGL 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 + +++ AN+ + +G E LF + NP +S D +FF + Sbjct: 253 T-EDVKMFLRHNANKALNNLGYEALFGPDQTAVNPSILAALSPNADENH--DFFSGSGSS 309 Query: 116 YQQGAEL-----KWD 125 Y G WD Sbjct: 310 YVIGTAEATTDDDWD 324 >gi|68535550|ref|YP_250255.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium jeikeium K411] gi|68263149|emb|CAI36637.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium jeikeium K411] Length = 331 Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 5/91 (5%) Query: 1 MRDESLHLNFGIDVI-NQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59 +RDES+H + ++ E P +E ++ + +L E E Y + +G Sbjct: 201 IRDESVHGYYIGYKYQRALENETPE-RQEELKEHTFDLLLELYDNEAQYTEDLY--DELG 257 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90 ++++++ AN+ + +G E LF E Sbjct: 258 WT-EDVKRFLRYNANKALNNLGYEGLFPADE 287 >gi|218690804|ref|YP_002399016.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli ED1a] gi|218428368|emb|CAR09297.2| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like [Escherichia coli ED1a] Length = 319 Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 50/126 (39%), Gaps = 6/126 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQARREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117 + + ++ + AN+ +G EPLF NP + + + + +FF + Y Sbjct: 247 -SDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAIFAALSPNADENHDFFSGSGSSYV 305 Query: 118 QGAELK 123 G ++ Sbjct: 306 MGKAVE 311 >gi|261343568|ref|ZP_05971213.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia rustigianii DSM 4541] gi|282568717|gb|EFB74252.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia rustigianii DSM 4541] Length = 323 Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 14/133 (10%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + E ++ + ++L + EI Y E VG Sbjct: 193 IRDEAIHGYYIGYKFQKSLATYNEQQQNEIKEFTFSLLFDLYENEIKYTQELY--DSVGW 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114 + + ++ + AN+ +G E LF +S I D + +FF + Sbjct: 251 S-EDVKSFLHYNANKALMNLGYEALFPEA---ITQVSPEILSALSPDANENHDFFSGSGS 306 Query: 115 EYQ--QGAELKWD 125 Y + + D Sbjct: 307 SYVIGKAVSTEDD 319 >gi|315658919|ref|ZP_07911786.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus lugdunensis M23590] gi|315496043|gb|EFU84371.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus lugdunensis M23590] Length = 322 Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 7/109 (6%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DES+H F ++ E ++ ++ +L + E++Y H +GL Sbjct: 194 DESIHGVFTGIDAQSLRNELSENEKQQADKEMYVLLEDLYSNEVSYTHMLYDD--IGLT- 250 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109 Y+++ N+ +G +P F+ + NP + +D + +FF Sbjct: 251 EDVLNYVKYNGNKALSNLGFDPYFEEKDFNPI--IENALDTTTKNHDFF 297 >gi|289551411|ref|YP_003472315.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit [Staphylococcus lugdunensis HKU09-01] gi|289180942|gb|ADC88187.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit [Staphylococcus lugdunensis HKU09-01] Length = 322 Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 7/109 (6%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DES+H F ++ E ++ ++ +L + E++Y H +GL Sbjct: 194 DESIHGVFTGIDAQSLRNELSENEKQQADKEMYVLLEDLYSNEVSYTHMLYDD--IGLT- 250 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109 Y+++ N+ +G +P F+ + NP + +D + +FF Sbjct: 251 EDVLNYVKYNGNKALSNLGFDPYFEEKDFNPI--IENALDTTTKNHDFF 297 >gi|262203177|ref|YP_003274385.1| ribonucleoside-diphosphate reductase [Gordonia bronchialis DSM 43247] gi|262086524|gb|ACY22492.1| Ribonucleoside-diphosphate reductase [Gordonia bronchialis DSM 43247] Length = 334 Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E Y E + GL Sbjct: 204 IRDEAVHGYYIGYKYQRGLEVQTAERRQELKDYTFELLFELYDNESDY-TEALYDEV-GL 261 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E +F E NP +S D +FF + Sbjct: 262 T-EDVKKFLRYNANKALMNLGYEAMFPKDETDVNPAILSALSPNADENH--DFFSGSGSS 318 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 319 YVIGKAVNTEDEDWD 333 >gi|322692090|ref|YP_004221660.1| ribonucleotide-diphosphate reductase beta subunit [Bifidobacterium longum subsp. longum JCM 1217] gi|320456946|dbj|BAJ67568.1| ribonucleotide-diphosphate reductase beta subunit [Bifidobacterium longum subsp. longum JCM 1217] Length = 330 Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 10/130 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + Q + +L+E E+ Y + VGL Sbjct: 200 IRDEAVHGYYIGYKYQKGIAQLSDAERLDLQDYTYDLLNELYDNEVEYTQSLYDR--VGL 257 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115 E+++++ N+ +G LF NP +S D +FF + Sbjct: 258 T-DDVEKFLRYNGNKALMNLGYPALFPAEICDVNPAILAALSPNADENH--DFFSGSGSS 314 Query: 116 YQQGAELKWD 125 Y G + D Sbjct: 315 YVMGKAEETD 324 >gi|222150734|ref|YP_002559887.1| ribonucleoside-diphosphate reductase minor subunit [Macrococcus caseolyticus JCSC5402] gi|222119856|dbj|BAH17191.1| ribonucleoside-diphosphate reductase minor subunit [Macrococcus caseolyticus JCSC5402] Length = 322 Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 15/113 (13%) Query: 3 DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58 DES+H F + N++ + KE +L E E +Y + V Sbjct: 194 DESIHGVFTGLDAQSLRNEMTEDEKIRADKEM----YDLLKELYANEESYTKMLYDR--V 247 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109 GL Y+Q+ N+ +G EP F+ NP + ++ + +FF Sbjct: 248 GLT-EDVLNYVQYNGNKALANLGFEPYFEEKGFNPI--IENALNTSTKNHDFF 297 >gi|227833759|ref|YP_002835466.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium aurimucosum ATCC 700975] gi|262184833|ref|ZP_06044254.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium aurimucosum ATCC 700975] gi|227454775|gb|ACP33528.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium aurimucosum ATCC 700975] Length = 328 Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 44/126 (34%), Gaps = 10/126 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + Q E Q K +L + E Y + +G Sbjct: 198 IRDEAVHGYYIGYKYQQQVKHLDQAQQAELQSKVIDLLLDLMDNEEHYTRDLY--DPLGW 255 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ AN+ + +G + ++ NP ++ D +FF + Sbjct: 256 T-EDVLAFLRYNANKALNNLGYDGIYPQDMCRFNPGVMTSLNPGADENH--DFFSGSGSS 312 Query: 116 YQQGAE 121 Y G Sbjct: 313 YVIGTA 318 >gi|325977861|ref|YP_004287577.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325177789|emb|CBZ47833.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 320 Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E F++ +L++ E Y ++ G G Sbjct: 189 IRDESVHGTYIGYKFQLGFNELSEEEQDNFREWMYDLLYQLYENEENYTK-SLYDGV-GW 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 247 T-DEVLTFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 296 >gi|239622882|ref|ZP_04665913.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Bifidobacterium longum subsp. infantis CCUG 52486] gi|312133660|ref|YP_004000999.1| nrdf [Bifidobacterium longum subsp. longum BBMN68] gi|317482331|ref|ZP_07941351.1| ribonucleotide reductase [Bifidobacterium sp. 12_1_47BFAA] gi|322690138|ref|YP_004209872.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium longum subsp. infantis 157F] gi|239514879|gb|EEQ54746.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Bifidobacterium longum subsp. infantis CCUG 52486] gi|291517762|emb|CBK71378.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Bifidobacterium longum subsp. longum F8] gi|311772922|gb|ADQ02410.1| NrdF [Bifidobacterium longum subsp. longum BBMN68] gi|316916211|gb|EFV37613.1| ribonucleotide reductase [Bifidobacterium sp. 12_1_47BFAA] gi|320461474|dbj|BAJ72094.1| ribonucleotide-diphosphate reductase beta subunit [Bifidobacterium longum subsp. infantis 157F] Length = 330 Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 10/130 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + Q + +L+E E+ Y + VGL Sbjct: 200 IRDEAVHGYYIGYKYQKGIAQLSDAERLDLQDYTYDLLNELYDNEVEYTQSLYDR--VGL 257 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115 E+++++ N+ +G LF NP +S D +FF + Sbjct: 258 T-DDVEKFLRYNGNKALMNLGYPALFPAEICDVNPAILAALSPNADENH--DFFSGSGSS 314 Query: 116 YQQGAELKWD 125 Y G + D Sbjct: 315 YVMGKAEETD 324 >gi|238750475|ref|ZP_04611976.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia rohdei ATCC 43380] gi|238711406|gb|EEQ03623.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia rohdei ATCC 43380] Length = 323 Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 52/135 (38%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + +E + + +L + E+ Y + K VG Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKVDNNRRQEIKNFAFDLLQDLYDNEVRYTEDLYDK--VGW 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++ + AN+ +G E LF + NP +S D +FF + Sbjct: 251 T-EDVKSFLHYNANKALMNLGYEALFPANQAEVNPAILAALSPNADENH--DFFSGSGSS 307 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 308 YVIGKAVITEDEDWD 322 >gi|295398337|ref|ZP_06808379.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus viridans ATCC 11563] gi|294973476|gb|EFG49261.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus viridans ATCC 11563] Length = 317 Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 3/89 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + Q E + F Q + L E E A+ E + +GL Sbjct: 186 IRDESVHGTYLGYKFRQDFEELTQDEQEAFTQWMYSFLEELLEKEFAFTEELYTE--IGL 243 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT 89 A + ++++ AN+ +G F+ Sbjct: 244 -AEDIKTFVKYNANKSLQNMGFGIYFENA 271 >gi|25028975|ref|NP_739029.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium efficiens YS-314] gi|259508040|ref|ZP_05750940.1| ribonucleoside-diphosphate reductase R2-2, beta subunit [Corynebacterium efficiens YS-314] gi|23494262|dbj|BAC19229.1| ribonucleotide reductase beta chain [Corynebacterium efficiens YS-314] gi|259164381|gb|EEW48935.1| ribonucleoside-diphosphate reductase R2-2, beta subunit [Corynebacterium efficiens YS-314] Length = 334 Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 39/90 (43%), Gaps = 3/90 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E ++ + +L++ E Y + +G Sbjct: 204 IRDEAVHGYYVGYKYQKALARESAQRQEELKEYAFDLLYDLYENETQYTEDLY--DELGW 261 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90 ++++++ AN+ + +G E LF E Sbjct: 262 T-EDVKRFLRYNANKAMNNLGYEGLFPADE 290 >gi|227547058|ref|ZP_03977107.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212475|gb|EEI80364.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 330 Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 10/130 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + Q + +L+E E+ Y + VGL Sbjct: 200 IRDEAVHGYYIGYKYQKGIAQLSDAERLDLQDYTYDLLNELYDNEVEYTQSLYDR--VGL 257 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115 E+++++ N+ +G LF NP +S D +FF + Sbjct: 258 T-DDVEKFLRYNGNKALMNLGYPALFPAEICDVNPAILAALSPNADENH--DFFSGSGSS 314 Query: 116 YQQGAELKWD 125 Y G + D Sbjct: 315 YVMGKAEETD 324 >gi|221309908|ref|ZP_03591755.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus subtilis subsp. subtilis str. 168] gi|221314231|ref|ZP_03596036.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319154|ref|ZP_03600448.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus subtilis subsp. subtilis str. JH642] gi|221323427|ref|ZP_03604721.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus subtilis subsp. subtilis str. SMY] Length = 123 Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 7/96 (7%) Query: 28 KEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK 87 KE + +L E E+ Y + VGL AP ++++++ AN+ + +G + F+ Sbjct: 16 KELYAWALNLLQELYENELEYTEDVY--DQVGL-APDVKKFIRYNANKALNNLGFDHWFE 72 Query: 88 YTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQGAE 121 + NP + ++ K + +FF T+ Y++ Sbjct: 73 EEDVNPI--VINGLNTKTKSHDFFSTKGNGYKKATV 106 >gi|306833073|ref|ZP_07466204.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus bovis ATCC 700338] gi|304424782|gb|EFM27917.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus bovis ATCC 700338] Length = 320 Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E F++ +L++ E Y ++ G G Sbjct: 189 IRDESVHGTYIGYKFQLGFNELSEEEQDNFREWMYDLLYQLYENEENYTK-SLYDGV-GW 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 247 T-DEVLTFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 296 >gi|13274105|emb|CAC33823.1| ribonucleotide reductase beta-subunit [Corynebacterium glutamicum] Length = 201 Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 53/132 (40%), Gaps = 12/132 (9%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E ++ + +L++ E Y+ + +G Sbjct: 71 IRDEAVHGYYIGYKYQKAVAKETPERQEELKEYTFDLLYDLYDNETQYSEDLYDD--LGW 128 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----NPFPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ + +G E LF E N +S D +FF + Sbjct: 129 T-EDVKRFLRYNANKALNNLGYEGLFPADETKVSPNILSALSPNADENH--DFFSGSGSS 185 Query: 116 YQ--QGAELKWD 125 Y + + D Sbjct: 186 YVIGKAENTEDD 197 >gi|288904913|ref|YP_003430135.1| ribonucleoside-diphosphate reductase (minor subunit) [Streptococcus gallolyticus UCN34] gi|306830970|ref|ZP_07464132.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|288731639|emb|CBI13196.1| ribonucleoside-diphosphate reductase (minor subunit) [Streptococcus gallolyticus UCN34] gi|304426993|gb|EFM30103.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 320 Score = 45.0 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E F++ +L++ E Y ++ G G Sbjct: 189 IRDESVHGTYIGYKFQLGFNELSEEEQDNFREWMYDLLYQLYENEENYTK-SLYDGV-GW 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 247 T-DEVLTFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 296 >gi|32709417|gb|AAP86727.1| NrdB [Enterobacteria phage LZ2] Length = 313 Score = 45.0 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 5/65 (7%) Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56 RDE LHL +I Q+++ + +E +Q++ + E E +A G Sbjct: 249 RDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQEKDWAVHLFKDGD 308 Query: 57 FVGLN 61 GLN Sbjct: 309 VPGLN 313 >gi|254819781|ref|ZP_05224782.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium intracellulare ATCC 13950] Length = 322 Score = 45.0 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 21/138 (15%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKE---FQQKSRTMLHEATLLEIAYAHETMPKGF 57 +RDE++H G + + + L E ++ + +L+ EI YAH+ Sbjct: 192 IRDEAVH---GFYIGYKCQRGLAELSEPERSGHREYTYELLNALYTNEIDYAHDLY--DG 246 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVID--LKKEKNFFETR 112 +G YM+F ANR +G EP+F ++ NP + +D + +FF Sbjct: 247 LGWT-DDVLPYMRFNANRALANLGYEPMFGPSDCRVNPA--VLSALDPGAGENHDFFSGS 303 Query: 113 VTEYQQGA-----ELKWD 125 + Y G+ + WD Sbjct: 304 GSSYVIGSHQATEDADWD 321 >gi|90962208|ref|YP_536124.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus salivarius UCC118] gi|301300452|ref|ZP_07206652.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus salivarius ACS-116-V-Col5a] gi|90821402|gb|ABE00041.1| Ribonucleoside-diphosphate reductase beta chain [Lactobacillus salivarius UCC118] gi|300214875|gb|ADJ79291.1| Ribonucleoside-diphosphate reductase beta chain [Lactobacillus salivarius CECT 5713] gi|300851949|gb|EFK79633.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus salivarius ACS-116-V-Col5a] Length = 326 Score = 45.0 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 6/112 (5%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E +EF +L+E E Y H K VG Sbjct: 188 LRDESVHGTYIGYKFQLGFNELSDDEQEEFTSWMYDLLYELYENEEKYTHLLYDK--VGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEK-NFF 109 ++++ AN+ +G++PLF Y +N P + I +FF Sbjct: 246 T-DDVLVFLRYNANKALMNLGMDPLFADGYAQNVNPVVMNGISTSTSNHDFF 296 >gi|227833933|ref|YP_002835640.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium aurimucosum ATCC 700975] gi|262184936|ref|ZP_06044357.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium aurimucosum ATCC 700975] gi|227454949|gb|ACP33702.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium aurimucosum ATCC 700975] Length = 329 Score = 45.0 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 53/132 (40%), Gaps = 12/132 (9%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + Q + +E + + +L++ EI Y + +G Sbjct: 199 IRDEAVHGYYIGYKFQQGYQKLSEPEQEEMKGYAFDLLYDLYENEIDYTEDLY--DELGW 256 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ + +G E LF E +P +S D +FF + Sbjct: 257 T-EDVKRFLRYNANKALNNLGFEGLFPADETRVSPAILSSLSPNADENH--DFFSGSGSS 313 Query: 116 YQ--QGAELKWD 125 Y + E D Sbjct: 314 YVIGKAEETTDD 325 >gi|171779596|ref|ZP_02920552.1| hypothetical protein STRINF_01433 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281698|gb|EDT47132.1| hypothetical protein STRINF_01433 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 144 Score = 45.0 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E + + +L++ E Y VG Sbjct: 12 IRDESVHGTYIGYKFQLGFNELSEKEQDDLRDWMYDLLYQLYENEENYTKTLY--DQVGW 69 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 70 T-EEVLTFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 119 >gi|227891214|ref|ZP_04009019.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus salivarius ATCC 11741] gi|227867088|gb|EEJ74509.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus salivarius ATCC 11741] Length = 326 Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 6/112 (5%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E +EF +L+E E Y H K VG Sbjct: 188 LRDESVHGTYIGYKFQLGFNELSDDEQEEFTSWMYDLLYELYENEEKYTHLLYDK--VGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEK-NFF 109 ++++ AN+ +G++PLF Y +N P + I +FF Sbjct: 246 T-DDVLVFLRYNANKALMNLGMDPLFADGYAQNVNPVVMNGISTSTSNHDFF 296 >gi|238762669|ref|ZP_04623638.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia kristensenii ATCC 33638] gi|238698974|gb|EEP91722.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia kristensenii ATCC 33638] Length = 323 Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L + E+ Y + VG Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKVDISRRQEIKNFAYNLLQDLYDNEVRYTADLY--DGVGW 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF + NP +S D +FF + Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPADQANVNPAILAALSPNADENH--DFFSGSGSS 307 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 308 YVIGKAVNTEDEDWD 322 >gi|315654326|ref|ZP_07907234.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus curtisii ATCC 51333] gi|315657771|ref|ZP_07910651.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315491361|gb|EFU80978.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus curtisii ATCC 51333] gi|315491568|gb|EFU81179.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 322 Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 49/126 (38%), Gaps = 10/126 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + E+ +E + + ++L + E Y +GL Sbjct: 192 IRDEAVHGYYIGYKYQLAMRESSESRRQEMKDYTFSLLMDLYDNEELYTETLY--DPLGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF + NP +S D +FF + Sbjct: 250 T-EDVKKFLKYNANKALMNLGYEALFTADQVNVNPAILAALSPAADENH--DFFSGSGSS 306 Query: 116 YQQGAE 121 Y G Sbjct: 307 YAIGTA 312 >gi|298345735|ref|YP_003718422.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus curtisii ATCC 43063] gi|304390565|ref|ZP_07372518.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|298235796|gb|ADI66928.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus curtisii ATCC 43063] gi|304326321|gb|EFL93566.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 322 Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 49/126 (38%), Gaps = 10/126 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + E+ +E + + ++L + E Y +GL Sbjct: 192 IRDEAVHGYYIGYKYQLAMRESSESRRQEMKDYTFSLLMDLYDNEELYTETLY--DPLGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++++ AN+ +G E LF + NP +S D +FF + Sbjct: 250 T-EDVKKFLKYNANKALMNLGYEALFTADQVNVNPAILAALSPAADENH--DFFSGSGSS 306 Query: 116 YQQGAE 121 Y G Sbjct: 307 YAIGTA 312 >gi|227112968|ref|ZP_03826624.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 320 Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + ++ + + +L + E+ Y E VG Sbjct: 190 IRDEAVHGYYIGYKFQRGLAKVDSARHQQVKNFAYDLLQDLYDNEVLYTQELY--DGVGW 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF + NP +S D +FF + Sbjct: 248 T-EDVKKFLHYNANKALMNLGYEALFPASMTDVNPAILSALSPNADENH--DFFSGSGSS 304 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 305 YVIGKAVNTEDEDWD 319 >gi|330908707|gb|EGH37221.1| ribonucleotide reductase of class 1b (aerobic), beta subunit [Escherichia coli AA86] Length = 319 Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQARHEELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115 A + ++ + AN+ +G EPLF NP + + ++N FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|193890961|gb|ACF28634.1| ribonucleotide reductase [Amphidinium carterae] Length = 213 Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 17/43 (39%), Gaps = 7/43 (16%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLL 44 RDE LH +F + +++ P +++ A + Sbjct: 178 RDEGLHADFACLIYRKLQNHLPE-------DVVHSIMRGAVEV 213 >gi|332087397|gb|EGI92525.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella boydii 5216-82] Length = 319 Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + P +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKIPLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115 A + ++ + AN+ +G EPLF NP + + ++N FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|194433043|ref|ZP_03065326.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella dysenteriae 1012] gi|194418770|gb|EDX34856.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella dysenteriae 1012] gi|320180201|gb|EFW55137.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii ATCC 9905] gi|332088601|gb|EGI93714.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella dysenteriae 155-74] Length = 319 Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + P +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKIPLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 A + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|332162772|ref|YP_004299349.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325667002|gb|ADZ43646.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 323 Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + +E + + +L + EI Y E++ G G Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKLDNNRRQEIKNFAFDLLQDLYDNEIHY-TESLYDGV-GW 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF ++ NP +S D +FF + Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPASQANVNPAILAALSPNADENH--DFFSGSGSS 307 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 308 YVIGKAVNTEDEDWD 322 >gi|319899230|ref|YP_004159323.1| ribonucleoside-diphosphate reductase beta chain [Bartonella clarridgeiae 73] gi|319403194|emb|CBI76753.1| ribonucleoside-diphosphate reductase beta chain [Bartonella clarridgeiae 73] Length = 324 Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 45/127 (35%), Gaps = 10/127 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + +E + + ML + +E Y +GL Sbjct: 194 IRDEAVHGYYIGYKFQLGFANLDKAKRQEIKDFAFNMLFDLYNIECKYTENLY--DSIGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++ + AN+ +G E LF NP +S D +FF + Sbjct: 252 T-EDVKVFLHYNANKALMNLGFEALFPPEVCRVNPAILAALSPNSDENH--DFFSGSGSS 308 Query: 116 YQQGAEL 122 Y G + Sbjct: 309 YVIGKAV 315 >gi|318606878|emb|CBY28376.1| ribonucleotide reductase of class Ib (aerobic),beta subunit [Yersinia enterocolitica subsp. palearctica Y11] Length = 323 Score = 44.3 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + +E + + +L + EI Y E++ G G Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKLDNNRRQEIKNFTFDLLQDLYDNEIHY-TESLYDGV-GW 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF ++ NP +S D +FF + Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPASQANVNPAILAALSPNADENH--DFFSGSGSS 307 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 308 YVIGKAVNTEDEDWD 322 >gi|291455662|ref|ZP_06595052.1| ribonucleoside-diphosphate reductase, beta subunit [Bifidobacterium breve DSM 20213] gi|291382590|gb|EFE90108.1| ribonucleoside-diphosphate reductase, beta subunit [Bifidobacterium breve DSM 20213] Length = 330 Score = 44.3 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 10/130 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + Q + +L+E E+ Y + VGL Sbjct: 200 IRDEAVHGYYIGYKYQKGIAQLTDAERMDMQDYTYDLLNELYDNEVEYTQSLYDR--VGL 257 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115 E+++++ N+ +G LF NP +S D +FF + Sbjct: 258 T-EDVEKFLRYNGNKALMNLGYPALFPAEICDVNPAILAALSPNADENH--DFFSGSGSS 314 Query: 116 YQQGAELKWD 125 Y G + D Sbjct: 315 YVMGKAEETD 324 >gi|321309596|ref|YP_004191925.1| ribonucleotide reductase subunit beta [Mycoplasma haemofelis str. Langford 1] gi|319801440|emb|CBY92086.1| ribonucleotide reductase of class Ib (aerobic), beta subunit [Mycoplasma haemofelis str. Langford 1] Length = 327 Score = 44.3 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 56/126 (44%), Gaps = 7/126 (5%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +I KE ++K +L E EI Y K +GL Sbjct: 197 IRDEAIHGLYIGVLSMEIFKTFNEEKQKEMKEKVICLLRELMANEIKYTELIYSK--IGL 254 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117 +++++ AN+ +G E + T+ NP + + + K +FF T+ Y Sbjct: 255 -VEDVNRFLEYNANKALQNLGFENEYSTTDKDINPIVF-NGLKTTTKSHDFFSTKGNGYI 312 Query: 118 QGAELK 123 + +++ Sbjct: 313 KTTKVE 318 >gi|50122260|ref|YP_051427.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium atrosepticum SCRI1043] gi|49612786|emb|CAG76236.1| ribonucleoside-diphosphate reductase 2 beta chain [Pectobacterium atrosepticum SCRI1043] Length = 320 Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + ++ + + +L + E+ Y E VG Sbjct: 190 IRDEAVHGYYIGYKFQRALAKADPARQQQVKNFAYDLLQDLYDNEVLYTQELY--DGVGW 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF + NP +S D +FF + Sbjct: 248 T-EDVKKFLHYNANKALMNLGYEALFPASMTDVNPAILSALSPNADENH--DFFSGSGSS 304 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 305 YVIGKAVNTEDEDWD 319 >gi|170017903|ref|YP_001728822.1| ribonucleotide reductase, beta subunit [Leuconostoc citreum KM20] gi|169804760|gb|ACA83378.1| Ribonucleotide reductase, beta subunit [Leuconostoc citreum KM20] Length = 324 Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 3/87 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + + P + Q +L+E E Y HE +G Sbjct: 193 IRDESVHGTYIGYKFQIGFNKLPESESTALQSWMYDLLYELYENEEKYTHELYDD--LGW 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK 87 ++++ AN+ +G EP+F Sbjct: 251 T-EQVLTFLRYNANKALMNLGQEPMFP 276 >gi|291618545|ref|YP_003521287.1| NrdF [Pantoea ananatis LMG 20103] gi|291153575|gb|ADD78159.1| NrdF [Pantoea ananatis LMG 20103] gi|327394924|dbj|BAK12346.1| ribonucleoside-diphosphate reductase 2 beta subunit NrdF [Pantoea ananatis AJ13355] Length = 319 Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + QQ + +L E+ Y VG Sbjct: 189 IRDEAVHGYYIGYKYQKALEQVDEGRREALQQFAIDLLLALYENEVVYTEALYGD--VGW 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115 A + ++ + AN+ +G E LF NP +S D +FF + Sbjct: 247 -AEEVKTFLHYNANKALMNLGYEALFPAELTQVNPAILSALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|170765644|ref|ZP_02900455.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia albertii TW07627] gi|170124790|gb|EDS93721.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia albertii TW07627] Length = 319 Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 14/130 (10%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58 +RDE++H + K + T +E ++ + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIG--YKHQKNQEKISLTQREELKRFAFDLLLELYDNELQYTDELYAETTW 246 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRV 113 A + ++ + AN+ +G EPLF NP +S D +FF Sbjct: 247 ---ADDVKAFLCYNANKALMNLGYEPLFPAEMAKVNPAILAALSPNADENH--DFFSGSG 301 Query: 114 TEYQQGAELK 123 + Y G ++ Sbjct: 302 SSYVMGKAVE 311 >gi|258508470|ref|YP_003171221.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus rhamnosus GG] gi|257148397|emb|CAR87370.1| Ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus rhamnosus GG] gi|259649782|dbj|BAI41944.1| ribonucleotide reductase beta subunit [Lactobacillus rhamnosus GG] Length = 326 Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ Q +L++ E Y ++ K Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEAEQQQLQDWMYDLLYDLYENEEKYTNDLYAKTKW-- 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G E F T NP M+ + +FF Sbjct: 246 -TDEVLTFLRYNANKALMNLGQETAFPDTADDVNPIV-MNGISTSTANHDFF 295 >gi|229552273|ref|ZP_04440998.1| ribonucleoside-diphosphate reductase [Lactobacillus rhamnosus LMS2-1] gi|258539683|ref|YP_003174182.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus rhamnosus Lc 705] gi|229314345|gb|EEN80318.1| ribonucleoside-diphosphate reductase [Lactobacillus rhamnosus LMS2-1] gi|257151359|emb|CAR90331.1| Ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus rhamnosus Lc 705] Length = 326 Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ Q +L++ E Y ++ K Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEAEQQQLQDWMYDLLYDLYENEEKYTNDLYAKTKW-- 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G E F T NP M+ + +FF Sbjct: 246 -TDEVLTFLRYNANKALMNLGQETAFPDTADDVNPIV-MNGISTSTANHDFF 295 >gi|57867410|ref|YP_189075.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus epidermidis RP62A] gi|57638068|gb|AAW54856.1| ribonucleoside-diphosphate reductase 2, beta subunit [Staphylococcus epidermidis RP62A] Length = 340 Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 39/96 (40%), Gaps = 12/96 (12%) Query: 3 DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58 DE++H + + ++ E ++ +++ + + E+ YA K + Sbjct: 200 DETIHGSGTGYAAQVIFDKFSKEE----QEDIRKELMELFDQLYFNEVEYAASLYDK--L 253 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPF 93 GL +Y+Q+ NR +G E +F NP Sbjct: 254 GLT-EDVIRYIQYNGNRALMNLGWETVFNPEPFNPI 288 >gi|257069608|ref|YP_003155863.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Brachybacterium faecium DSM 4810] gi|256560426|gb|ACU86273.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Brachybacterium faecium DSM 4810] Length = 322 Score = 43.9 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 50/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + E + + ++L E E Y + VG Sbjct: 192 IRDEAVHGYYIGYKYQKAVEKLSAERQAELKDYTFSLLMELYDNEEVYTEDIY--DPVGW 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++++ AN+ +G E LF NP +S D +FF + Sbjct: 250 T-EDVKVFLRYNANKALMNLGYEGLFPQEATQVNPAILASLSPNADENH--DFFSGSGSS 306 Query: 116 YQQGAELK-----WD 125 Y G ++ WD Sbjct: 307 YVMGKAVETEDDDWD 321 >gi|325677552|ref|ZP_08157215.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus equi ATCC 33707] gi|325551623|gb|EGD21322.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus equi ATCC 33707] Length = 322 Score = 43.9 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 8/123 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + ++ + +L E+AYA + VG Sbjct: 192 IRDEAVHGYYIGYKCRKALERLDASARDAHRRYTYALLETLYANEVAYAADLY--DEVGW 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEY 116 A YM+F AN+ +G EP+F+ +E NP +S + E +FF + Y Sbjct: 250 TAEVVS-YMRFNANKALANLGYEPMFRASECQVNPAI-LSALDPGAGENHDFFSGSGSAY 307 Query: 117 QQG 119 G Sbjct: 308 VIG 310 >gi|146322252|ref|YP_001174719.1| putative ribonucleotide reductase subunit beta [Lactococcus lactis] gi|145968743|gb|ABQ00021.1| putative ribonucleotide reductase subunit beta [Lactococcus lactis] Length = 316 Score = 43.9 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 10/114 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + Q E + F + L E E AY E + +GL Sbjct: 186 IRDESVHGTYLGYKFRQDFNELSITEQENFTNWMYSFLEELLDNEFAYTEEVYSE--IGL 243 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEK-NFF 109 + ++++ AN+ +G + FK NP + I ++ +FF Sbjct: 244 -VEDIKTFVKYNANKSLQNMGFDIYFKDASANDVNPI--VMNGISIETANHDFF 294 >gi|300718018|ref|YP_003742821.1| ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia billingiae Eb661] gi|299063854|emb|CAX60974.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia billingiae Eb661] Length = 319 Score = 43.9 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 ++DE++H + + + E QQ + +L E+AY E + G G Sbjct: 189 IKDEAVHGYYIGYKYQKALEKESPARKDELQQFAVELLLALYENELAY-TEALYDGV-GW 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++++ + AN+ +G E LF NP +S D +FF + Sbjct: 247 S-EEVKKFLHYNANKALMNLGYEALFPAEMTDVNPAILSALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G + Sbjct: 304 YVMGKAVD 311 >gi|123441277|ref|YP_001005264.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088238|emb|CAL11027.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 323 Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + +E + + +L + EI Y E++ G G Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKVDNNRRQEIKNFAFDLLQDLYDNEIHY-TESLYDGV-GW 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF ++ NP +S D +FF + Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPASQANVNPAILAALSPNADENH--DFFSGSGSS 307 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 308 YVIGKAVNTEDEDWD 322 >gi|238794433|ref|ZP_04638043.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia intermedia ATCC 29909] gi|238726228|gb|EEQ17772.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia intermedia ATCC 29909] Length = 330 Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 54/136 (39%), Gaps = 17/136 (12%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + Q + + +E + + +L + E+ Y + K VG Sbjct: 200 IRDEAVHGYYIGYKFQQGLEKVDNARRQEIKNFAFDLLQDLYDNEVRYTEDLYDK--VGW 257 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114 ++++ + AN+ +G E LF ++ +S I + + +FF + Sbjct: 258 T-EDVKKFLHYNANKALMNLGYEALFPASQAA---VSPAILAALSPNADENHDFFSGSGS 313 Query: 115 EYQQGAEL-----KWD 125 Y G + WD Sbjct: 314 SYVIGKAINTEDEDWD 329 >gi|312869696|ref|ZP_07729843.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus oris PB013-T2-3] gi|311094745|gb|EFQ53042.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus oris PB013-T2-3] Length = 339 Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E ++ + L+E E Y H K +G Sbjct: 197 LRDESVHGTYIGYKFQVGLHERTEKQQQDMKDWLYNFLYELYDNEEKYTHLLYDK--IGW 254 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 255 T-DDVLTFIRYNANKALMNLGQDPLFPDTAADVNPVV-MNGISTSTSNHDFF 304 >gi|295395248|ref|ZP_06805456.1| ribonucleotide-diphosphate reductase subunit beta [Brevibacterium mcbrellneri ATCC 49030] gi|294972010|gb|EFG47877.1| ribonucleotide-diphosphate reductase subunit beta [Brevibacterium mcbrellneri ATCC 49030] Length = 324 Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 52/132 (39%), Gaps = 12/132 (9%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + E + + +L++ E+ Y H+ VGL Sbjct: 194 IRDEAVHGYYIGYKYQRALANESTERRDELKDYTFALLYDLYENEVQYTHDLY--DSVGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++++ + AN+ +G E +F T NP +S D +FF + Sbjct: 252 S-EDVKKFLNYNANKALMNLGYEAMFPSTVTDVNPAILSALSPSSDENH--DFFSGSGSS 308 Query: 116 YQ--QGAELKWD 125 Y + + D Sbjct: 309 YVIGKAENTEDD 320 >gi|284922618|emb|CBG35706.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli 042] Length = 319 Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNMKKISQAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 A + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|307547024|ref|YP_003899503.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas elongata DSM 2581] gi|307219048|emb|CBV44318.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas elongata DSM 2581] Length = 324 Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 3/90 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + ++ + + +L + E+ Y VGL Sbjct: 194 IRDEAVHGYYIGYKFQRALEKESAERQRQIKDTTYDLLLDLYDNEVQYTESLY--DEVGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90 + ++ + AN+ +G E LF Sbjct: 252 T-EDVKAFLHYNANKALMNLGYEALFPNAT 280 >gi|269941513|emb|CBI49911.1| ribonucleoside-diphosphate reductase subunit [Staphylococcus aureus subsp. aureus TW20] Length = 340 Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 38/96 (39%), Gaps = 12/96 (12%) Query: 3 DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58 DE++H + + + E ++ +++ + + E+ YA K + Sbjct: 200 DETIHGSGTGYAAQVIFEKFSKEE----QEDIRKELMELFDQLYFNEVEYAASLYDK--L 253 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPF 93 GL +Y+Q+ NR +G E +F NP Sbjct: 254 GLT-EDVIRYIQYNGNRALMNLGWETVFNPEPFNPI 288 >gi|218706176|ref|YP_002413695.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli UMN026] gi|293406173|ref|ZP_06650099.1| ribonucleotide reductase beta subunit [Escherichia coli FVEC1412] gi|298381910|ref|ZP_06991507.1| ribonucleoside-diphosphate reductase subunit beta [Escherichia coli FVEC1302] gi|300898656|ref|ZP_07116977.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 198-1] gi|301019059|ref|ZP_07183270.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 69-1] gi|331674197|ref|ZP_08374957.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli TA280] gi|218433273|emb|CAR14173.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like [Escherichia coli UMN026] gi|291426179|gb|EFE99211.1| ribonucleotide reductase beta subunit [Escherichia coli FVEC1412] gi|298277050|gb|EFI18566.1| ribonucleoside-diphosphate reductase subunit beta [Escherichia coli FVEC1302] gi|300357684|gb|EFJ73554.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 198-1] gi|300399412|gb|EFJ82950.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 69-1] gi|331068291|gb|EGI39686.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli TA280] Length = 319 Score = 43.9 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKSQEKISQAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 A + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|25027435|ref|NP_737489.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium efficiens YS-314] gi|259506419|ref|ZP_05749321.1| ribonucleoside-diphosphate reductase R2-2, beta subunit [Corynebacterium efficiens YS-314] gi|23492716|dbj|BAC17689.1| putative ribonucleotide reductase [Corynebacterium efficiens YS-314] gi|259165992|gb|EEW50546.1| ribonucleoside-diphosphate reductase R2-2, beta subunit [Corynebacterium efficiens YS-314] Length = 339 Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 48/133 (36%), Gaps = 11/133 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + ++ +L + E+ Y +G Sbjct: 209 IRDEAIHGYYIGYKYQKHIATLSPEKQATNHDEAVELLLDLYDNELEYTRHVYDD--LGW 266 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVI-DLKKEKNFFETRVTEYQ 117 + ++++ AN+ +G E +F + F M+ + + +FF + Y Sbjct: 267 S-EDVSAFLRYNANKAMQNLGYESIFPVDQCKFDPGVMTSLDPSSNENHDFFSGSGSSYV 325 Query: 118 QG-----AELKWD 125 G ++ WD Sbjct: 326 IGDVEATSDEDWD 338 >gi|171779436|ref|ZP_02920400.1| hypothetical protein STRINF_01281 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282053|gb|EDT47484.1| hypothetical protein STRINF_01281 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 316 Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 10/114 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + Q E + F + L E E AY E + +GL Sbjct: 186 IRDESVHGTYLGYKFRQDFNELAITEQENFTNWMYSFLEELLDNEFAYTEEVYSE--IGL 243 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEK-NFF 109 + ++++ AN+ +G + FK NP + I ++ +FF Sbjct: 244 -VEDIKTFVKYNANKSLQNMGFDIYFKDASANDVNPI--VMNGISIETANHDFF 294 >gi|146318863|ref|YP_001198575.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus suis 05ZYH33] gi|146321071|ref|YP_001200782.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus suis 98HAH33] gi|223932819|ref|ZP_03624816.1| Ribonucleoside-diphosphate reductase [Streptococcus suis 89/1591] gi|253751944|ref|YP_003025085.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus suis SC84] gi|253753767|ref|YP_003026908.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus suis P1/7] gi|253755355|ref|YP_003028495.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus suis BM407] gi|330833008|ref|YP_004401833.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus suis ST3] gi|145689669|gb|ABP90175.1| Ribonucleotide reductase, beta subunit [Streptococcus suis 05ZYH33] gi|145691877|gb|ABP92382.1| Ribonucleotide reductase, beta subunit [Streptococcus suis 98HAH33] gi|223898528|gb|EEF64892.1| Ribonucleoside-diphosphate reductase [Streptococcus suis 89/1591] gi|251816233|emb|CAZ51860.1| putative ribonucleoside-diphosphate reductase beta chain [Streptococcus suis SC84] gi|251817819|emb|CAZ55572.1| putative ribonucleoside-diphosphate reductase beta chain [Streptococcus suis BM407] gi|251820013|emb|CAR46187.1| putative ribonucleoside-diphosphate reductase beta chain [Streptococcus suis P1/7] gi|292558520|gb|ADE31521.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus suis GZ1] gi|319758306|gb|ADV70248.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus suis JS14] gi|329307231|gb|AEB81647.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus suis ST3] Length = 319 Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E + + +L++ E Y VG Sbjct: 188 IRDESVHGTYIGYKFQLGFNELSEEEQDKLRDWMYDLLYQLYENEEGYTRSLY--DAVGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 246 T-EEVLTFLRYNANKALMNLGQDPLFPDSADDVNPII-MNGISTGTSNHDFF 295 >gi|261820460|ref|YP_003258566.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium wasabiae WPP163] gi|261604473|gb|ACX86959.1| Ribonucleoside-diphosphate reductase [Pectobacterium wasabiae WPP163] Length = 320 Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + ++ + + +L + E+ Y E VG Sbjct: 190 IRDEAVHGYYIGYKFQRGLAKADPARQQQVKNFAYDLLQDLYDNEVLYTQELY--DGVGW 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF + NP +S D +FF + Sbjct: 248 T-EDVKKFLHYNANKALMNLGYEALFPASMTDVNPAILSALSPNADENH--DFFSGSGSS 304 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 305 YVIGKAVNTEDEDWD 319 >gi|330861133|emb|CBX71396.1| ribonucleoside-diphosphate reductase 2 subunit beta [Yersinia enterocolitica W22703] Length = 239 Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + +E + + +L + EI Y E++ G G Sbjct: 109 IRDEAVHGYYIGYKFQKGLEKLDNNRRQEIKNFAFDLLQDLYDNEIHY-TESLYDGV-GW 166 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF ++ NP +S D +FF + Sbjct: 167 T-EDVKKFLHYNANKALMNLGYEALFPASQANVNPAILAALSPNADENH--DFFSGSGSS 223 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 224 YVIGKAVNTEDEDWD 238 >gi|302023955|ref|ZP_07249166.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus suis 05HAS68] Length = 320 Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E + + +L++ E Y VG Sbjct: 189 IRDESVHGTYIGYKFQLGFNELSEEEQDKLRDWMYDLLYQLYENEEGYTRSLY--DAVGW 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF + NP M+ + +FF Sbjct: 247 T-EEVLTFLRYNANKALMNLGQDPLFPDSADDVNPII-MNGISTGTSNHDFF 296 >gi|253689503|ref|YP_003018693.1| Ribonucleoside-diphosphate reductase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756081|gb|ACT14157.1| Ribonucleoside-diphosphate reductase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 320 Score = 43.5 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + ++ + + +L + E+ Y E VG Sbjct: 190 IRDEAVHGYYIGYKFQRGLAKADPARQQQVKNFAYDLLQDLYDNEVLYTQELY--DGVGW 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF + NP +S D +FF + Sbjct: 248 T-EDVKKFLHYNANKALMNLGYEALFPASMTDVNPAILSALSPNADENH--DFFSGSGSS 304 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 305 YVIGKAVNTEDEDWD 319 >gi|227329868|ref|ZP_03833892.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 320 Score = 43.5 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + ++ + + +L + E+ Y E VG Sbjct: 190 IRDEAVHGYYIGYKFQRGLAKADPARQQQVKNFAYDLLQDLYDNEVLYTQELY--DGVGW 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF + NP +S D +FF + Sbjct: 248 T-EDVKKFLHYNANKALMNLGYEALFPASMTDVNPAILSALSPNADENH--DFFSGSGSS 304 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 305 YVIGKAVNTEDEDWD 319 >gi|1395207|gb|AAB81405.1| ribonucleotide reductase R2-1 small subunit [Mycobacterium tuberculosis str. Erdman] Length = 321 Score = 43.5 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + ++ + +LH EI YAH+ +G Sbjct: 191 IRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDLY--DELGW 248 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVID--LKKEKNFFETRVTE 115 YM++ AN+ +G +P F NP + +D + +FF + Sbjct: 249 T-DDVLPYMRYNANKALANLGYQPAFDRDTCQVNPA--VRAALDPGAGENHDFFSGSGSS 305 Query: 116 YQQG-----AELKWD 125 Y G + WD Sbjct: 306 YVMGTHQPTTDTDWD 320 >gi|227548647|ref|ZP_03978696.1| ribonucleoside-diphosphate reductase [Corynebacterium lipophiloflavum DSM 44291] gi|227079261|gb|EEI17224.1| ribonucleoside-diphosphate reductase [Corynebacterium lipophiloflavum DSM 44291] Length = 332 Score = 43.5 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 39/90 (43%), Gaps = 3/90 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + E + + +L++ E Y + +G Sbjct: 202 IRDEAVHGYYIGYKYQRGQADLSQAERDELKDYTFNLLYDLYENETQYTEDIY--DPLGW 259 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90 ++++++ AN+ + +G E LF E Sbjct: 260 T-EDVKRFLRYNANKALNNLGYEGLFPQDE 288 >gi|184154755|ref|YP_001843095.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus fermentum IFO 3956] gi|260663216|ref|ZP_05864108.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus fermentum 28-3-CHN] gi|183226099|dbj|BAG26615.1| ribonucleoside-diphosphate reductase beta subunit [Lactobacillus fermentum IFO 3956] gi|260552408|gb|EEX25459.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus fermentum 28-3-CHN] gi|299782855|gb|ADJ40853.1| Ribonucleoside-diphosphate reductase beta subunit [Lactobacillus fermentum CECT 5716] Length = 333 Score = 43.5 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + + ++ ++ L+E E Y H +G Sbjct: 191 LRDESVHGTYIGYKFQVGMNQLTEKQQQDMKRWMYDFLYELYDNEEKYTHVLY--DQIGW 248 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 249 T-DDVLVFIRYNANKALMNLGQDPLFPDTASDVNPVV-MNGISTTTSNHDFF 298 >gi|15841457|ref|NP_336494.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis CDC1551] gi|57116932|ref|YP_177853.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis H37Rv] gi|148661790|ref|YP_001283313.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis H37Ra] gi|148823195|ref|YP_001287949.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis F11] gi|167970496|ref|ZP_02552773.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis H37Ra] gi|215404217|ref|ZP_03416398.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis 02_1987] gi|215411671|ref|ZP_03420467.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis 94_M4241A] gi|215427336|ref|ZP_03425255.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis T92] gi|215430897|ref|ZP_03428816.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis EAS054] gi|215446189|ref|ZP_03432941.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis T85] gi|218753694|ref|ZP_03532490.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis GM 1503] gi|219557941|ref|ZP_03537017.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis T17] gi|253798971|ref|YP_003031972.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis KZN 1435] gi|254232151|ref|ZP_04925478.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1 [Mycobacterium tuberculosis C] gi|254364798|ref|ZP_04980844.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1 [Mycobacterium tuberculosis str. Haarlem] gi|254551002|ref|ZP_05141449.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260186953|ref|ZP_05764427.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis CPHL_A] gi|260201080|ref|ZP_05768571.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis T46] gi|289443470|ref|ZP_06433214.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium tuberculosis T46] gi|289447597|ref|ZP_06437341.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis CPHL_A] gi|289554242|ref|ZP_06443452.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis KZN 605] gi|289570077|ref|ZP_06450304.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis T17] gi|289746076|ref|ZP_06505454.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis 02_1987] gi|289750559|ref|ZP_06509937.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis T92] gi|289754082|ref|ZP_06513460.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis EAS054] gi|289758093|ref|ZP_06517471.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis T85] gi|289762136|ref|ZP_06521514.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1 [Mycobacterium tuberculosis GM 1503] gi|294996911|ref|ZP_06802602.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis 210] gi|297634550|ref|ZP_06952330.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis KZN 4207] gi|297731538|ref|ZP_06960656.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis KZN R506] gi|298525478|ref|ZP_07012887.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis 94_M4241A] gi|306776213|ref|ZP_07414550.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis SUMu001] gi|306779994|ref|ZP_07418331.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis SUMu002] gi|306784744|ref|ZP_07423066.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis SUMu003] gi|306789101|ref|ZP_07427423.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis SUMu004] gi|306793436|ref|ZP_07431738.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis SUMu005] gi|306797819|ref|ZP_07436121.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis SUMu006] gi|306803700|ref|ZP_07440368.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis SUMu008] gi|306808274|ref|ZP_07444942.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis SUMu007] gi|306968097|ref|ZP_07480758.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis SUMu009] gi|306972322|ref|ZP_07484983.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis SUMu010] gi|307080033|ref|ZP_07489203.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis SUMu011] gi|307084607|ref|ZP_07493720.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis SUMu012] gi|313658871|ref|ZP_07815751.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis KZN V2475] gi|1710397|sp|Q10840|RIR2A_MYCTU RecName: Full=Ribonucleoside-diphosphate reductase subunit beta nrdF1; AltName: Full=Ribonucleotide reductase R2-1 small subunit; AltName: Full=Ribonucleotide reductase small subunit 1 gi|13881697|gb|AAK46308.1| ribonucleoside-diphosphate reductase R2-1, beta subunit [Mycobacterium tuberculosis CDC1551] gi|38490297|emb|CAE55444.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF1 (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN) [Mycobacterium tuberculosis H37Rv] gi|124601210|gb|EAY60220.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1 [Mycobacterium tuberculosis C] gi|134150312|gb|EBA42357.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1 [Mycobacterium tuberculosis str. Haarlem] gi|148505942|gb|ABQ73751.1| ribonucleoside-diphosphate reductase subunit beta NrdF1 [Mycobacterium tuberculosis H37Ra] gi|148721722|gb|ABR06347.1| ribonucleoside-diphosphate reductase beta subunit nrdF1 [Mycobacterium tuberculosis F11] gi|253320474|gb|ACT25077.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis KZN 1435] gi|289416389|gb|EFD13629.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium tuberculosis T46] gi|289420555|gb|EFD17756.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis CPHL_A] gi|289438874|gb|EFD21367.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis KZN 605] gi|289543831|gb|EFD47479.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis T17] gi|289686604|gb|EFD54092.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis 02_1987] gi|289691146|gb|EFD58575.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis T92] gi|289694669|gb|EFD62098.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis EAS054] gi|289709642|gb|EFD73658.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1 [Mycobacterium tuberculosis GM 1503] gi|289713657|gb|EFD77669.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis T85] gi|298495272|gb|EFI30566.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis 94_M4241A] gi|308215325|gb|EFO74724.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis SUMu001] gi|308327098|gb|EFP15949.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis SUMu002] gi|308330477|gb|EFP19328.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis SUMu003] gi|308334311|gb|EFP23162.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis SUMu004] gi|308338113|gb|EFP26964.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis SUMu005] gi|308341805|gb|EFP30656.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis SUMu006] gi|308345291|gb|EFP34142.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis SUMu007] gi|308349595|gb|EFP38446.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis SUMu008] gi|308354222|gb|EFP43073.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis SUMu009] gi|308358200|gb|EFP47051.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis SUMu010] gi|308362132|gb|EFP50983.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis SUMu011] gi|308365786|gb|EFP54637.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis SUMu012] gi|323719468|gb|EGB28595.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis CDC1551A] gi|326903590|gb|EGE50523.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis W-148] gi|328458726|gb|AEB04149.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis KZN 4207] Length = 322 Score = 43.5 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + ++ + +LH EI YAH+ +G Sbjct: 192 IRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDLY--DELGW 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVID--LKKEKNFFETRVTE 115 YM++ AN+ +G +P F NP + +D + +FF + Sbjct: 250 T-DDVLPYMRYNANKALANLGYQPAFDRDTCQVNPA--VRAALDPGAGENHDFFSGSGSS 306 Query: 116 YQQG-----AELKWD 125 Y G + WD Sbjct: 307 YVMGTHQPTTDTDWD 321 >gi|324005772|gb|EGB74991.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 57-2] Length = 319 Score = 43.5 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISQAQREELKSFAFDLLLELYDNELQYTDELYAETTW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115 A + ++ + AN+ +G EPLF NP + + ++N FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|281491477|ref|YP_003353457.1| ribonucleoside-diphosphate reductase subunit beta [Lactococcus lactis subsp. lactis KF147] gi|281375195|gb|ADA64708.1| Ribonucleoside-diphosphate reductase, beta chain [Lactococcus lactis subsp. lactis KF147] Length = 325 Score = 43.5 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 6/95 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E EF+ +L++ E Y+H K VG Sbjct: 196 IRDESVHGTYIGYKFQLGFNELSEDEQGEFRDWMYELLYQLYENEEKYSHLLYDK--VGW 253 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP 92 ++++ AN+ +G +PLF T NP Sbjct: 254 T-DEVLTFLRYNANKALMNLGQDPLFPDTAADVNP 287 >gi|31793160|ref|NP_855653.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium bovis AF2122/97] gi|224990358|ref|YP_002645045.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium bovis BCG str. Tokyo 172] gi|260205258|ref|ZP_05772749.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis K85] gi|289574653|ref|ZP_06454880.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis K85] gi|31618751|emb|CAD94705.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF1 (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN) [Mycobacterium bovis AF2122/97] gi|224773471|dbj|BAH26277.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium bovis BCG str. Tokyo 172] gi|289539084|gb|EFD43662.1| ribonucleoside-diphosphate reductase subunit beta nrdF1 [Mycobacterium tuberculosis K85] Length = 322 Score = 43.5 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + ++ + +LH EI YAH+ +G Sbjct: 192 IRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDLY--DELGW 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVID--LKKEKNFFETRVTE 115 YM++ AN+ +G +P F NP + +D + +FF + Sbjct: 250 T-DDVLPYMRYNANKALANLGYQPAFDRDTCQVNPA--VRAALDPGAGENHDFFSGSGSS 306 Query: 116 YQQG-----AELKWD 125 Y G + WD Sbjct: 307 YVMGTHQPTTDTDWD 321 >gi|116511803|ref|YP_809019.1| ribonucleotide-diphosphate reductase subunit beta [Lactococcus lactis subsp. cremoris SK11] gi|125624347|ref|YP_001032830.1| ribonucleotide-diphosphate reductase subunit beta [Lactococcus lactis subsp. cremoris MG1363] gi|116107457|gb|ABJ72597.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Lactococcus lactis subsp. cremoris SK11] gi|124493155|emb|CAL98119.1| ribonucleoside-diphosphate reductase beta chain [Lactococcus lactis subsp. cremoris MG1363] gi|300071131|gb|ADJ60531.1| ribonucleotide-diphosphate reductase subunit beta [Lactococcus lactis subsp. cremoris NZ9000] Length = 325 Score = 43.5 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 6/95 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E EF+ +L++ E Y+H K VG Sbjct: 196 IRDESVHGTYIGYKFQLGFNELSEDEQSEFRDWMYELLYKLYENEENYSHLLYDK--VGW 253 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP 92 ++++ AN+ +G +PLF T NP Sbjct: 254 T-DEVLTFLRYNANKALMNLGQDPLFPDTAADVNP 287 >gi|295397108|ref|ZP_06807219.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus viridans ATCC 11563] gi|294974650|gb|EFG50366.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus viridans ATCC 11563] Length = 338 Score = 43.5 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 43/116 (37%), Gaps = 14/116 (12%) Query: 1 MRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56 +RDES+H + NQ+ I+ E + +L + E Y E + Sbjct: 208 IRDESVHGTYLGYKFQLGYNQLSIDE----QNELKDWMYALLFDLMENEEKYTEEIYTQ- 262 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK--YTENPFPWMSEVIDLKKEK-NFF 109 VG ++ + AN+ +G EP + EN P + I +FF Sbjct: 263 -VGWTKE-VNTFVHYNANKALQNLGFEPFYPDGTAENVNPIVMNGISTDSSNHDFF 316 >gi|153949141|ref|YP_001400043.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pseudotuberculosis IP 31758] gi|152960636|gb|ABS48097.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pseudotuberculosis IP 31758] Length = 323 Score = 43.5 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 53/136 (38%), Gaps = 17/136 (12%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + +E + + +L + E+ Y + VG Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKVDSVHRQEIKNFAFDLLQDLYDNEVRYTEDLY--DHVGW 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114 ++++ + AN+ +G E LF ++ +S I + + +FF + Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPASQAA---VSPAILAALSPNADENHDFFSGSGS 306 Query: 115 EYQQGAEL-----KWD 125 Y G + WD Sbjct: 307 SYVIGKAVNTEDEDWD 322 >gi|227514022|ref|ZP_03944071.1| ribonucleoside-diphosphate reductase [Lactobacillus fermentum ATCC 14931] gi|227087608|gb|EEI22920.1| ribonucleoside-diphosphate reductase [Lactobacillus fermentum ATCC 14931] Length = 333 Score = 43.5 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + + ++ ++ L+E E Y H +G Sbjct: 191 LRDESVHGTYIGYKFQVGMNQLTEKQQQDMKRWMYDFLYELYDNEEKYTHVLY--DQIGW 248 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 249 T-DDVLVFIRYNANKALMNLGQDPLFPDTASDVNPVV-MNGISTTTSNHDFF 298 >gi|328710829|ref|XP_003244373.1| PREDICTED: hypothetical protein LOC100575936 [Acyrthosiphon pisum] Length = 66 Score = 43.5 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 5/53 (9%) Query: 66 EQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR--VTEY 116 + Y+ A+R ++G + +PF E+ + + NFFE R T Y Sbjct: 8 KIYIGDFADRLLKELGFQQFTGRQTHPF---MELTPQQGKTNFFERRLSNTNY 57 >gi|15672956|ref|NP_267130.1| ribonucleotide-diphosphate reductase subunit beta [Lactococcus lactis subsp. lactis Il1403] gi|12723917|gb|AAK05072.1|AE006332_1 ribonucleoside-diphosphate reductase beta chain [Lactococcus lactis subsp. lactis Il1403] gi|326406518|gb|ADZ63589.1| ribonucleoside-diphosphate reductase beta chain [Lactococcus lactis subsp. lactis CV56] Length = 325 Score = 43.5 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 6/95 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E EF+ +L++ E Y+H K VG Sbjct: 196 IRDESVHGTYIGYKFQLGFNELSEDEQGEFRDWMYELLYQLYENEEKYSHLLYDK--VGW 253 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP 92 ++++ AN+ +G +PLF T NP Sbjct: 254 T-DEVLTFLRYNANKALMNLGQDPLFPDTAADVNP 287 >gi|331648397|ref|ZP_08349485.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli M605] gi|331042144|gb|EGI14286.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli M605] Length = 319 Score = 43.5 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQTRREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115 A + ++ + AN+ +G EPLF NP + + ++N FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|281179683|dbj|BAI56013.1| ribonucleoside-diphosphate reductase beta subunit [Escherichia coli SE15] Length = 319 Score = 43.5 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQARREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115 A + ++ + AN+ +G EPLF NP + + ++N FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|207112033|ref|ZP_03246195.1| hypothetical protein HpylH_23419 [Helicobacter pylori HPKX_438_CA4C1] Length = 32 Score = 43.5 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 13/32 (40%) Query: 47 AYAHETMPKGFVGLNAPSCEQYMQFIANRRCH 78 +A + GLN Y++++ N R Sbjct: 1 EWACYVIGNEVPGLNEKMITDYIRYLGNLRWK 32 >gi|331684294|ref|ZP_08384886.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli H299] gi|331077909|gb|EGI49115.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli H299] Length = 319 Score = 43.1 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQARREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115 A + ++ + AN+ +G EPLF NP + + ++N FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|307132178|ref|YP_003884194.1| ribonucleoside-diphosphate reductase 2, subunit beta, ferritin-like protein [Dickeya dadantii 3937] gi|306529707|gb|ADM99637.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein [Dickeya dadantii 3937] Length = 330 Score = 43.1 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + Q ++ Q + +L E+ Y HE VG Sbjct: 200 IRDEAVHGYYIGYKYQQGLKRVGTQQQRDLQAFAYDLLQTLYDNEVDYTHELYDD--VGW 257 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN--FFETRVTE 115 + +++ + AN+ +G E LF NP + + E+N FF + Sbjct: 258 S-DDVVKFLHYNANKALMNLGYEALFPAGMTDVNPA--ILAALSPGAEENHDFFSGAGSS 314 Query: 116 YQQGAELK-----WD 125 Y G ++ WD Sbjct: 315 YVIGKAVETEDEDWD 329 >gi|331654159|ref|ZP_08355159.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli M718] gi|331047541|gb|EGI19618.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli M718] Length = 319 Score = 43.1 bits (101), Expect = 0.013, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISQAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 A + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILTALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|317049232|ref|YP_004116880.1| ribonucleoside-diphosphate reductase [Pantoea sp. At-9b] gi|316950849|gb|ADU70324.1| Ribonucleoside-diphosphate reductase [Pantoea sp. At-9b] Length = 322 Score = 43.1 bits (101), Expect = 0.013, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 48/128 (37%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E QQ + +L E+ Y VG Sbjct: 192 IRDEAVHGYYIGYKYQKALENVDDARREELQQFAIELLLALYENEVVYTEALYAD--VGW 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115 A + ++ + AN+ +G E LF T NP +S D +FF + Sbjct: 250 -AEEVKTFLHYNANKALMNLGYEALFPAELTTVNPAILAALSPNADENH--DFFSGSGSS 306 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 307 YVMGKAVE 314 >gi|215487997|ref|YP_002330428.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O127:H6 str. E2348/69] gi|215266069|emb|CAS10489.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like [Escherichia coli O127:H6 str. E2348/69] Length = 319 Score = 43.1 bits (101), Expect = 0.013, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISQAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 A + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|296117839|ref|ZP_06836422.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium ammoniagenes DSM 20306] gi|295969070|gb|EFG82312.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium ammoniagenes DSM 20306] Length = 328 Score = 43.1 bits (101), Expect = 0.013, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 46/130 (35%), Gaps = 9/130 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + N Q + +L + E + +G Sbjct: 199 IRDEAIHGYYIGYKYQNYLK-NDKARHAANQDEIVDLLLDLYDNESHFTEAVY--DQIGW 255 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVI-DLKKEKNFFETRVTEYQ 117 + ++++ AN+ + +G E +F E F M+ + + +FF + Y Sbjct: 256 T-EDVKAFLRYNANKAMNNLGYEAIFPQEECKFNAGVMTSLDPSANENHDFFSGSGSSYV 314 Query: 118 --QGAELKWD 125 + E D Sbjct: 315 IGKAEETTDD 324 >gi|293572347|ref|ZP_06683339.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium E980] gi|291607581|gb|EFF36911.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium E980] Length = 316 Score = 43.1 bits (101), Expect = 0.013, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 10/114 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + Q E + + + L E E AY E + +GL Sbjct: 186 IRDESVHGTYLGYKFRQDFNELSITEQENYTNWMYSFLEELLDNEFAYTEEVYSE--IGL 243 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEK-NFF 109 + ++++ AN+ +G + FK NP + I ++ +FF Sbjct: 244 -VEDIKTFVKYNANKSLQNMGFDIYFKDASANDVNPI--VMNGISIETANHDFF 294 >gi|227358546|ref|ZP_03842871.1| ribonucleoside-diphosphate reductase beta chain [Proteus mirabilis ATCC 29906] gi|227161257|gb|EEI46331.1| ribonucleoside-diphosphate reductase beta chain [Proteus mirabilis ATCC 29906] Length = 337 Score = 43.1 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 11/133 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + L ++ + + ++L + E+ Y + VG Sbjct: 207 IRDEAVHGYYIGYKFQNQLLNKSSLEKQDIKDFAFSLLLDLYDNEVKYTEDLY--DSVGW 264 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVI--DLKKEKNFFETRVTEYQ 117 ++++ + AN+ +G E LF N P + + D + +FF + Y Sbjct: 265 T-EDVKKFLHYNANKALMNLGYEALFPDEITNVSPAILSSLSPDANENHDFFSGSGSSYV 323 Query: 118 QGAEL-----KWD 125 G + WD Sbjct: 324 IGKTINTEDDDWD 336 >gi|300941043|ref|ZP_07155562.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 21-1] gi|300454207|gb|EFK17700.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 21-1] Length = 319 Score = 43.1 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISQAQREELKNFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 A + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|293415927|ref|ZP_06658567.1| ribonucleoside-diphosphate reductase [Escherichia coli B185] gi|291432116|gb|EFF05098.1| ribonucleoside-diphosphate reductase [Escherichia coli B185] Length = 319 Score = 43.1 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115 A + ++ + AN+ +G EPLF NP + + ++N FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|203288309|ref|YP_002223359.1| ribonucleoside-diphosphate reductase, beta subunit [Borrelia recurrentis A1] gi|203288575|ref|YP_002223482.1| ribonucleoside-diphosphate reductase beta subunit [Borrelia duttonii Ly] gi|201084282|gb|ACH93870.1| ribonucleoside-diphosphate reductase beta subunit [Borrelia duttonii Ly] gi|201085529|gb|ACH95102.1| ribonucleoside-diphosphate reductase, beta subunit [Borrelia recurrentis A1] Length = 321 Score = 42.7 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 52/125 (41%), Gaps = 15/125 (12%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTML---HEATLLEIAYAHETMPKGF 57 +RDES+H F + + E + KE + + ML + LE Y E Sbjct: 192 LRDESVHGVFVGLL---AQEEFDKMTMKEQELAYKEMLLILEKLYSLEREYTKELYSC-- 246 Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRV 113 VGL + + ++++ A++ +G + F + NP + + + +FF T+ Sbjct: 247 VGLESA-VDVFVRYNADKALMNLGFDTKFNIKDTDVNPL--VLNGLRTDTKTHDFFSTKG 303 Query: 114 TEYQQ 118 Y + Sbjct: 304 NGYIK 308 >gi|188533084|ref|YP_001906881.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia tasmaniensis Et1/99] gi|188028126|emb|CAO95983.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia tasmaniensis Et1/99] Length = 319 Score = 42.7 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 54/135 (40%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 ++DE++H + + + +E QQ + +L E E+AY E + G G Sbjct: 189 IKDEAVHGYYIGYKYQKSLEKETAPRKEELQQFAIDLLLELYENEVAY-TEALYAGV-GW 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G + LF NP +S D +FF + Sbjct: 247 -QEDVKKFLHYNANKALMNLGYQALFPSYMTDVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK-----WD 125 Y G ++ WD Sbjct: 304 YVMGKAVETEDEDWD 318 >gi|26249071|ref|NP_755111.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli CFT073] gi|227888210|ref|ZP_04006015.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli 83972] gi|300986153|ref|ZP_07177743.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 45-1] gi|301050518|ref|ZP_07197394.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 185-1] gi|26109478|gb|AAN81681.1|AE016765_83 Ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli CFT073] gi|227834850|gb|EEJ45316.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli 83972] gi|300297774|gb|EFJ54159.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 185-1] gi|300407907|gb|EFJ91445.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 45-1] gi|307554652|gb|ADN47427.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli ABU 83972] gi|315290985|gb|EFU50350.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 153-1] Length = 319 Score = 42.7 bits (100), Expect = 0.016, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 48/128 (37%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQARREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 A ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 247 -ADDVTAFLCYNANKALMNLGYEPLFPAGMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|189490606|ref|YP_001957176.1| hypothetical ribonucleotide reductase beta subunit [Pseudomonas phage 201phi2-1] gi|164609671|gb|ABY63280.1| hypothetical ribonucleotide reductase beta subunit [Pseudomonas phage 201phi2-1] Length = 386 Score = 42.7 bits (100), Expect = 0.017, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 46/122 (37%), Gaps = 23/122 (18%) Query: 3 DE-SLHLNFGIDVINQI-KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM--PKGFV 58 DE +H FG +VI + K E + ++ + + + E + E+ + + Sbjct: 233 DEYEIHAQFGQEVIKALLKTERGLIAYEDTKAECIKLFWEILMSEVNWLIYLFSEGRELP 292 Query: 59 GLNAPSCEQYMQFIAN---------------RRCHQI---GLEPLFKYTENPFPWMSEVI 100 G+ Q++ F N R + G E F +NP P+M E + Sbjct: 293 GVTLKKMVQWVLFNCNAAGTFTGHKDGITDEMRAEFLATTGFELEFP-DKNPLPYMVEYL 351 Query: 101 DL 102 DL Sbjct: 352 DL 353 >gi|283786769|ref|YP_003366634.1| ribonucleoside-diphosphate reductase 2 beta chain [Citrobacter rodentium ICC168] gi|282950223|emb|CBG89859.1| ribonucleoside-diphosphate reductase 2 beta chain [Citrobacter rodentium ICC168] Length = 319 Score = 42.7 bits (100), Expect = 0.017, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + P ++ + + +L E E+ Y E G Sbjct: 189 IRDEAVHGYYIGYKYQKGMEKLPDAAREDLKNFALDLLMELYDNEVRYTEELYAD--TG- 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 +A + ++ + AN+ +G E LF NP +S D +FF + Sbjct: 246 HAEDVQAFLCYNANKAMMNLGYEALFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|323359290|ref|YP_004225686.1| ribonucleotide reductase, beta subunit [Microbacterium testaceum StLB037] gi|323275661|dbj|BAJ75806.1| ribonucleotide reductase, beta subunit [Microbacterium testaceum StLB037] Length = 324 Score = 42.7 bits (100), Expect = 0.017, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 52/130 (40%), Gaps = 8/130 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + + ++L+E E+ Y VGL Sbjct: 194 IRDEAVHGYYIGYKFQRGLETVDQARRDDIKDYTFSLLYELYDNEVGYTQSLY--DAVGL 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKN--FFETRVTEYQ 117 + ++++ + AN+ +G E +F + N P + + ++N FF + Y Sbjct: 252 S-EDVKKFLHYNANKALMNLGYEAMFPSSVTNVNPAILSALSPNADENHDFFSGSGSSYV 310 Query: 118 --QGAELKWD 125 + + D Sbjct: 311 IGKAEATEDD 320 >gi|148543559|ref|YP_001270929.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus reuteri DSM 20016] gi|184152966|ref|YP_001841307.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus reuteri JCM 1112] gi|227363481|ref|ZP_03847603.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus reuteri MM2-3] gi|325681909|ref|ZP_08161427.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus reuteri MM4-1A] gi|148530593|gb|ABQ82592.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Lactobacillus reuteri DSM 20016] gi|183224310|dbj|BAG24827.1| ribonucleotide diphosphate reductase beta subunit [Lactobacillus reuteri JCM 1112] gi|227071495|gb|EEI09796.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus reuteri MM2-3] gi|324978553|gb|EGC15502.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus reuteri MM4-1A] Length = 339 Score = 42.7 bits (100), Expect = 0.017, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 47/125 (37%), Gaps = 9/125 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + + ++ + L+E E Y H VG Sbjct: 197 LRDESVHGTYIGYKFQVGLRDRTEKQQQDMKDWMYNFLYELYDNEEKYTHLLY--DQVGW 254 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTE-Y 116 ++++ AN+ +G +PLF T NP M+ + +FF V Y Sbjct: 255 T-DDVLTFIRYNANKALMNLGQDPLFPDTASDVNPVV-MNGISTSTSNHDFFSQ-VGNGY 311 Query: 117 QQGAE 121 + GA Sbjct: 312 RMGAV 316 >gi|227510692|ref|ZP_03940741.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227513708|ref|ZP_03943757.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus buchneri ATCC 11577] gi|227522501|ref|ZP_03952550.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus hilgardii ATCC 8290] gi|227083027|gb|EEI18339.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus buchneri ATCC 11577] gi|227090323|gb|EEI25635.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus hilgardii ATCC 8290] gi|227189813|gb|EEI69880.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 318 Score = 42.7 bits (100), Expect = 0.017, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + + P ++ + +L++ E Y H G Sbjct: 189 LRDESVHGTYIGYKFQIGFNQLPKTKQEDLKNWLYDLLYKLYANEEKYTHLLY--DQTGW 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 247 T-DDVLVFIRYNANKALMNLGQDPLFPDTAEDVNPVV-MNGISTSTANHDFF 296 >gi|312965591|ref|ZP_07779821.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia coli 2362-75] gi|312289740|gb|EFR17630.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia coli 2362-75] Length = 319 Score = 42.7 bits (100), Expect = 0.018, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISQAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 A + ++ + AN+ +G EPLF NP +S D +FF + + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSSSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|259502687|ref|ZP_05745589.1| ribonucleoside-diphosphate reductase 2 [Lactobacillus antri DSM 16041] gi|259169332|gb|EEW53827.1| ribonucleoside-diphosphate reductase 2 [Lactobacillus antri DSM 16041] Length = 339 Score = 42.7 bits (100), Expect = 0.018, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E ++ + L+E E Y H K +G Sbjct: 197 LRDESVHGTYVGYKFQVGLHERTEKQQQDMKDWMYNFLYELYDNEEKYTHLLYDK--IGW 254 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 255 T-DDVLTFIRYNANKALMNLGQDPLFPDTATDVNPVV-MNGISTSTSNHDFF 304 >gi|294669615|ref|ZP_06734682.1| hypothetical protein NEIELOOT_01516 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308528|gb|EFE49771.1| hypothetical protein NEIELOOT_01516 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 296 Score = 42.7 bits (100), Expect = 0.018, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 4/49 (8%) Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEI 46 RDE+LHL ++N ++ +++P + E Q + + +A E Sbjct: 237 RDEALHLTSTQHMLNLMRAGVDDPEMAEIAVELQDECFKLFKKAAEQEK 285 >gi|306812443|ref|ZP_07446641.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli NC101] gi|222034376|emb|CAP77117.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia coli LF82] gi|305854481|gb|EFM54919.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli NC101] gi|312947211|gb|ADR28038.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O83:H1 str. NRG 857C] Length = 319 Score = 42.7 bits (100), Expect = 0.018, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQARREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 + + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 247 -SDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|71034151|ref|XP_766717.1| ribonucleotide-diphosphate reductase small subunit [Theileria parva strain Muguga] gi|68353674|gb|EAN34434.1| ribonucleotide-diphosphate reductase small subunit, putative [Theileria parva] Length = 326 Score = 42.7 bits (100), Expect = 0.018, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 30/87 (34%), Gaps = 10/87 (11%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP---KGFVG 59 D +H F ++ K + ++ EA LE +A++ +P Sbjct: 208 DRHIHTRFAHCTFTLLQH-------KMLESDVVQLIKEALKLEYDFANKFLPLSLMAITQ 260 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLF 86 + YM+++ N G L+ Sbjct: 261 MLTDVLRGYMEWVGNNVLMVCGYRTLY 287 >gi|218547807|ref|YP_002381598.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia fergusonii ATCC 35469] gi|218355348|emb|CAQ87955.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like [Escherichia fergusonii ATCC 35469] Length = 319 Score = 42.7 bits (100), Expect = 0.018, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISLAQREELKSFAFDLLLELYDNELQYTDELYAETTW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 A + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|194468106|ref|ZP_03074092.1| Ribonucleoside-diphosphate reductase [Lactobacillus reuteri 100-23] gi|194452959|gb|EDX41857.1| Ribonucleoside-diphosphate reductase [Lactobacillus reuteri 100-23] Length = 339 Score = 42.7 bits (100), Expect = 0.018, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 47/125 (37%), Gaps = 9/125 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + + ++ + L+E E Y H VG Sbjct: 197 LRDESVHGTYIGYKFQVGLRDRTEKQQQDMKDWMYNFLYELYDNEEKYTHLLY--DQVGW 254 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTE-Y 116 ++++ AN+ +G +PLF T NP M+ + +FF V Y Sbjct: 255 T-DDVLTFIRYNANKALMNLGQDPLFPDTASDVNPVV-MNGISTSTSNHDFFSQ-VGNGY 311 Query: 117 QQGAE 121 + GA Sbjct: 312 RMGAV 316 >gi|293556439|ref|ZP_06675017.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium E1039] gi|291601403|gb|EFF31677.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus faecium E1039] Length = 316 Score = 42.7 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 47/126 (37%), Gaps = 10/126 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + Q E EF T L+E E AY E + +GL Sbjct: 186 IRDESVHGTYLGYKFRQDFEELTLEEKDEFTNWMYTFLNELLKNEFAYTEEVYSE--IGL 243 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT----ENPFPWMSEVIDLKKEK-NFFETRVTE 115 + ++++ AN+ +G F+ NP + I ++ +FF Sbjct: 244 -VEDIKTFVKYNANKSLQNMGFGIYFEDALVNDVNPI--VMNGISIETANHDFFSQVGAG 300 Query: 116 YQQGAE 121 Y G Sbjct: 301 YLMGGA 306 >gi|238796650|ref|ZP_04640156.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia mollaretii ATCC 43969] gi|238719381|gb|EEQ11191.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia mollaretii ATCC 43969] Length = 323 Score = 42.7 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 54/136 (39%), Gaps = 17/136 (12%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + +E + + +L + E+ Y + K VG Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKVDNNRRQEIKNFAFDLLQDLYDNEVRYTEDLYDK--VGW 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114 ++++ + AN+ +G E LF ++ +S I + + +FF + Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPSSQAA---VSPAILAALSPNADENHDFFSGSGS 306 Query: 115 EYQQGAEL-----KWD 125 Y G + WD Sbjct: 307 SYVIGKAVNTEDEDWD 322 >gi|227545165|ref|ZP_03975214.1| ribonucleoside-diphosphate reductase [Lactobacillus reuteri CF48-3A] gi|300909160|ref|ZP_07126621.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus reuteri SD2112] gi|227184848|gb|EEI64919.1| ribonucleoside-diphosphate reductase [Lactobacillus reuteri CF48-3A] gi|300893025|gb|EFK86384.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus reuteri SD2112] Length = 339 Score = 42.3 bits (99), Expect = 0.020, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 47/125 (37%), Gaps = 9/125 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + + ++ + L+E E Y H VG Sbjct: 197 LRDESVHGTYIGYKFQVGLRDRTEKQQQDMKDWMYNFLYELYDNEEKYTHLLY--DQVGW 254 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTE-Y 116 ++++ AN+ +G +PLF T NP M+ + +FF V Y Sbjct: 255 T-DDVLTFIRYNANKALMNLGQDPLFPDTASDVNPVV-MNGISTSTSNHDFFSQ-VGNGY 311 Query: 117 QQGAE 121 + GA Sbjct: 312 RMGAV 316 >gi|296111477|ref|YP_003621859.1| ribonucleotide-diphosphate reductase beta subunit [Leuconostoc kimchii IMSNU 11154] gi|295833009|gb|ADG40890.1| ribonucleotide-diphosphate reductase beta subunit [Leuconostoc kimchii IMSNU 11154] Length = 325 Score = 42.3 bits (99), Expect = 0.020, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 3/87 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + + P + Q +L+E E Y HE +G Sbjct: 193 IRDESVHGTYIGYKFQIGFNKLPLAEQESLQSWMYDLLYELYENEEKYTHELYDD--LGW 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK 87 + ++++ AN+ +G EP+F Sbjct: 251 S-EQVLTFLRYNANKALMNLGQEPMFP 276 >gi|238784826|ref|ZP_04628827.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia bercovieri ATCC 43970] gi|238714242|gb|EEQ06253.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia bercovieri ATCC 43970] Length = 323 Score = 42.3 bits (99), Expect = 0.020, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 53/136 (38%), Gaps = 17/136 (12%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L + E+ Y + K VG Sbjct: 193 IRDEAVHGYYIGYKFQKGLERVDNSRRQEIKNFAFDLLQDLYDNEVRYTEDLYDK--VGW 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114 ++++ + AN+ +G E LF ++ +S I + + +FF + Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPASQAA---VSPAILAALSPNADENHDFFSGSGS 306 Query: 115 EYQQGAEL-----KWD 125 Y G + WD Sbjct: 307 SYVIGKAVNTEDEDWD 322 >gi|22125124|ref|NP_668547.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis KIM 10] gi|45442235|ref|NP_993774.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis biovar Microtus str. 91001] gi|51597273|ref|YP_071464.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pseudotuberculosis IP 32953] gi|108808370|ref|YP_652286.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis Antiqua] gi|108811297|ref|YP_647064.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis Nepal516] gi|145598906|ref|YP_001162982.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis Pestoides F] gi|149365457|ref|ZP_01887492.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis CA88-4125] gi|162420024|ref|YP_001607865.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis Angola] gi|165925252|ref|ZP_02221084.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165939901|ref|ZP_02228439.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Orientalis str. IP275] gi|166008124|ref|ZP_02229022.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166212554|ref|ZP_02238589.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167398943|ref|ZP_02304467.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421281|ref|ZP_02313034.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423716|ref|ZP_02315469.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468720|ref|ZP_02333424.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis FV-1] gi|170023362|ref|YP_001719867.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pseudotuberculosis YPIII] gi|186896377|ref|YP_001873489.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pseudotuberculosis PB1/+] gi|218929725|ref|YP_002347600.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis CO92] gi|229838202|ref|ZP_04458361.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895452|ref|ZP_04510624.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein [Yersinia pestis Pestoides A] gi|229898686|ref|ZP_04513831.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein [Yersinia pestis biovar Orientalis str. India 195] gi|229901543|ref|ZP_04516665.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis Nepal516] gi|270489729|ref|ZP_06206803.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis KIM D27] gi|294504447|ref|YP_003568509.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis Z176003] gi|21957983|gb|AAM84798.1|AE013726_1 ribonucleoside-diphosphate reductase 2, beta chain, frag [Yersinia pestis KIM 10] gi|45437099|gb|AAS62651.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis biovar Microtus str. 91001] gi|51590555|emb|CAH22196.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pseudotuberculosis IP 32953] gi|108774945|gb|ABG17464.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Yersinia pestis Nepal516] gi|108780283|gb|ABG14341.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Yersinia pestis Antiqua] gi|115348336|emb|CAL21269.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis CO92] gi|145210602|gb|ABP40009.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Yersinia pestis Pestoides F] gi|149291870|gb|EDM41944.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis CA88-4125] gi|162352839|gb|ABX86787.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis Angola] gi|165912120|gb|EDR30759.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Orientalis str. IP275] gi|165922859|gb|EDR40010.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165992506|gb|EDR44807.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166206485|gb|EDR50965.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|166960770|gb|EDR56791.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051447|gb|EDR62855.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057886|gb|EDR67632.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169749896|gb|ACA67414.1| Ribonucleoside-diphosphate reductase [Yersinia pseudotuberculosis YPIII] gi|186699403|gb|ACC90032.1| ribonucleotide reductase [Yersinia pseudotuberculosis PB1/+] gi|229681472|gb|EEO77566.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis Nepal516] gi|229688234|gb|EEO80305.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein [Yersinia pestis biovar Orientalis str. India 195] gi|229694568|gb|EEO84615.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701607|gb|EEO89634.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein [Yersinia pestis Pestoides A] gi|262362562|gb|ACY59283.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis D106004] gi|262366433|gb|ACY62990.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis D182038] gi|270338233|gb|EFA49010.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis KIM D27] gi|294354906|gb|ADE65247.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis Z176003] gi|320016142|gb|ADV99713.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 323 Score = 42.3 bits (99), Expect = 0.020, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 52/136 (38%), Gaps = 17/136 (12%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L + E+ Y + VG Sbjct: 193 IRDEAVHGYYIGYKFQKGLGKIDSAHRQEIKNFAFDLLQDLYDNEVRYTEDLY--DHVGW 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114 ++++ + AN+ +G E LF ++ +S I + + +FF + Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPASQAA---VSPAILAALSPNADENHDFFSGSGS 306 Query: 115 EYQQGAEL-----KWD 125 Y G + WD Sbjct: 307 SYVIGKAVNTEDEDWD 322 >gi|307625752|gb|ADN70056.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli UM146] Length = 319 Score = 42.3 bits (99), Expect = 0.021, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNQEKISQAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 + + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 247 -SDDVKAFLCYNANKVLMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|91212037|ref|YP_542023.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli UTI89] gi|117624912|ref|YP_853853.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli APEC O1] gi|218559668|ref|YP_002392581.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli S88] gi|237706702|ref|ZP_04537183.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp. 3_2_53FAA] gi|91073611|gb|ABE08492.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli UTI89] gi|115514036|gb|ABJ02111.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli APEC O1] gi|218366437|emb|CAR04189.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like [Escherichia coli S88] gi|226899742|gb|EEH86001.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp. 3_2_53FAA] gi|294492274|gb|ADE91030.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli IHE3034] gi|315284934|gb|EFU44379.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 110-3] gi|323951102|gb|EGB46978.1| ribonucleotide reductase [Escherichia coli H252] gi|323957111|gb|EGB52836.1| ribonucleotide reductase [Escherichia coli H263] Length = 319 Score = 42.3 bits (99), Expect = 0.021, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNQEKISQAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 + + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 247 -SDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|197284313|ref|YP_002150185.1| ribonucleotide-diphosphate reductase subunit beta [Proteus mirabilis HI4320] gi|194681800|emb|CAR41036.1| ribonucleoside-diphosphate reductase beta chain [Proteus mirabilis HI4320] Length = 322 Score = 42.3 bits (99), Expect = 0.021, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 51/133 (38%), Gaps = 11/133 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + L + + + ++L + E+ Y + VG Sbjct: 192 IRDEAVHGYYIGYKFQNQLLNKSSLEKQNIKDFAFSLLLDLYDNEVKYTEDLY--DSVGW 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVI--DLKKEKNFFETRVTEYQ 117 ++++ + AN+ +G E LF N P + + D + +FF + Y Sbjct: 250 T-EDVKKFLHYNANKALMNLGYEALFPDEITNVSPAILSSLSPDANENHDFFSGSGSSYV 308 Query: 118 QGAEL-----KWD 125 G + WD Sbjct: 309 IGKTINTEDDDWD 321 >gi|199598384|ref|ZP_03211803.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus rhamnosus HN001] gi|199590703|gb|EDY98790.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus rhamnosus HN001] Length = 326 Score = 42.3 bits (99), Expect = 0.022, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P ++ Q +L++ E Y ++ K Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPAAEQQQLQDWMYDLLYDLYENEEKYTNDLYAKTKW-- 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G E F T NP M+ + +FF Sbjct: 246 -TDEVLTFLRYNANKALMNLGQETAFPDTADDVNPIV-MNGISTSTANHDFF 295 >gi|227529511|ref|ZP_03959560.1| ribonucleoside-diphosphate reductase [Lactobacillus vaginalis ATCC 49540] gi|227350596|gb|EEJ40887.1| ribonucleoside-diphosphate reductase [Lactobacillus vaginalis ATCC 49540] Length = 339 Score = 42.3 bits (99), Expect = 0.023, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 6/95 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + + ++ + L+E E Y H VG Sbjct: 197 LRDESVHGTYIGYKFQVGMHDRTEKQQQDMKDWMYNFLYELYDNEEKYTHLLY--DQVGW 254 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP 92 ++++ AN+ +G +PLF T NP Sbjct: 255 T-EDVLTFIRYNANKALMNLGQDPLFPDTASDVNP 288 >gi|324111310|gb|EGC05292.1| ribonucleotide reductase [Escherichia fergusonii B253] Length = 319 Score = 42.3 bits (99), Expect = 0.024, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISLAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 A + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|330718304|ref|ZP_08312904.1| ribonucleotide-diphosphate reductase subunit beta [Leuconostoc fallax KCTC 3537] Length = 326 Score = 42.3 bits (99), Expect = 0.024, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 33/87 (37%), Gaps = 3/87 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + + E Q +L E E + HE +G Sbjct: 192 IRDESVHGTYIGYKFQIGFNQLSEDEQSELQSWMYDLLFELYENEEKFTHELY--DEIGW 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK 87 ++++ AN+ +G EP+F Sbjct: 250 TDSVM-TFLRYNANKALMNLGQEPMFP 275 >gi|331658787|ref|ZP_08359729.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli TA206] gi|315298701|gb|EFU57955.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 16-3] gi|331053369|gb|EGI25398.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli TA206] Length = 319 Score = 42.3 bits (99), Expect = 0.025, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISLAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 A + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|325496274|gb|EGC94133.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia fergusonii ECD227] Length = 319 Score = 42.3 bits (99), Expect = 0.025, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNLGKTSLEQREELKNFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 A + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|228904848|ref|ZP_04068902.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis IBL 4222] gi|228854862|gb|EEM99466.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis IBL 4222] Length = 343 Score = 41.9 bits (98), Expect = 0.026, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 49/130 (37%), Gaps = 22/130 (16%) Query: 1 MRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET---M 53 +RDE++H F ++ E +E +++ +L E+ Y ++ + Sbjct: 204 LRDEAIHGVTGGIFAQEIYENQLTE---AEQQEVDKEAIQLLEMLYANELDYTNDVYAPL 260 Query: 54 PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEK---NFF 109 K + +++++ AN+ +G + F NP L+ + +FF Sbjct: 261 GKDMI----EEVNKFLRYNANKAMMNLGYDQYFDDEYVNPI----VQNGLQTKTKQHDFF 312 Query: 110 ETRVTEYQQG 119 + Y + Sbjct: 313 SVKGNGYVKA 322 >gi|75758223|ref|ZP_00738348.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74494277|gb|EAO57368.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 342 Score = 41.9 bits (98), Expect = 0.026, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 49/130 (37%), Gaps = 22/130 (16%) Query: 1 MRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET---M 53 +RDE++H F ++ E +E +++ +L E+ Y ++ + Sbjct: 203 LRDEAIHGVTGGIFAQEIYENQLTE---AEQQEVDKEAIQLLEMLYANELDYTNDVYAPL 259 Query: 54 PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEK---NFF 109 K + +++++ AN+ +G + F NP L+ + +FF Sbjct: 260 GKDMI----EEVNKFLRYNANKAMMNLGYDQYFDDEYVNPI----VQNGLQTKTKQHDFF 311 Query: 110 ETRVTEYQQG 119 + Y + Sbjct: 312 SVKGNGYVKA 321 >gi|326692188|ref|ZP_08229193.1| ribonucleotide-diphosphate reductase subunit beta [Leuconostoc argentinum KCTC 3773] Length = 325 Score = 41.9 bits (98), Expect = 0.026, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + + E Q +L++ E Y HE +G Sbjct: 194 IRDESVHGTYIGYKFQIGFNQLSEDEQAELQAWMYDLLYDLYENEEKYTHELYDD--LGW 251 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G EP+F NP M+ + +FF Sbjct: 252 -YEQVMTFLRYNANKALMNLGQEPMFPDGAEDVNPVV-MNGLSTSTANHDFF 301 >gi|291284009|ref|YP_003500827.1| Ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia coli O55:H7 str. CB9615] gi|290763882|gb|ADD57843.1| Ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia coli O55:H7 str. CB9615] Length = 319 Score = 41.9 bits (98), Expect = 0.027, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISPGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115 A + ++ + AN+ +G EPLF NP + + ++N FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|320194816|gb|EFW69445.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli WV_060327] Length = 319 Score = 41.9 bits (98), Expect = 0.027, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQEQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 + + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 247 -SDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|110642801|ref|YP_670531.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli 536] gi|191171432|ref|ZP_03032981.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli F11] gi|300990601|ref|ZP_07179251.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 200-1] gi|110344393|gb|ABG70630.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli 536] gi|190908366|gb|EDV67956.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli F11] gi|300305718|gb|EFJ60238.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 200-1] gi|324014406|gb|EGB83625.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 60-1] Length = 319 Score = 41.9 bits (98), Expect = 0.027, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQEQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 + + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 247 -SDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|218701171|ref|YP_002408800.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli IAI39] gi|218371157|emb|CAR18988.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like [Escherichia coli IAI39] Length = 319 Score = 41.9 bits (98), Expect = 0.027, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISLAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115 A + ++ + AN+ +G EPLF NP + + ++N FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|300173988|ref|YP_003773154.1| ribonucleoside-diphosphate reductase subunit beta [Leuconostoc gasicomitatum LMG 18811] gi|299888367|emb|CBL92335.1| ribonucleoside-diphosphate reductase, beta subunit [Leuconostoc gasicomitatum LMG 18811] Length = 325 Score = 41.9 bits (98), Expect = 0.029, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 3/87 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + + P E Q +L+E E Y H+ +G Sbjct: 193 IRDESVHGTYIGYKFQIGFNQLPAEEKSELQSWMYDLLYELYENEEKYTHQLYDD--LGW 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK 87 ++++ AN+ +G EP+F Sbjct: 251 T-EQVLTFLRYNANKALMNLGQEPMFP 276 >gi|227505793|ref|ZP_03935842.1| ribonucleoside-diphosphate reductase [Corynebacterium striatum ATCC 6940] gi|227197639|gb|EEI77687.1| ribonucleoside-diphosphate reductase [Corynebacterium striatum ATCC 6940] Length = 318 Score = 41.9 bits (98), Expect = 0.030, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 50/136 (36%), Gaps = 17/136 (12%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + Q + + + ++ + EI Y + +G Sbjct: 188 IRDEAVHGYYIGYKYQQAVKQLNPAQQQGLKDSVFDLVFDLYDNEITYTEKIY--DALGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114 ++++++ AN+ + +G E LF E + I D + +FF + Sbjct: 246 T-EDVKRFLRYNANKALNNLGYEGLFPSDECR---VDPAILSSLAPDANETHDFFSGSGS 301 Query: 115 EYQQGAELK-----WD 125 Y G + WD Sbjct: 302 SYVIGKAEETQDDDWD 317 >gi|323966928|gb|EGB62356.1| ribonucleotide reductase [Escherichia coli M863] gi|327251394|gb|EGE63080.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia coli STEC_7v] Length = 319 Score = 41.9 bits (98), Expect = 0.031, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISMAQREELKSFAFDLLLELYDNELQYTDELYAETTW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 A + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|270265355|ref|ZP_06193616.1| ribonucleoside-diphosphate reductase 2 subunit beta [Serratia odorifera 4Rx13] gi|270040759|gb|EFA13862.1| ribonucleoside-diphosphate reductase 2 subunit beta [Serratia odorifera 4Rx13] Length = 323 Score = 41.9 bits (98), Expect = 0.031, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 49/135 (36%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + ++ + + +L + E+ Y E VG Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKVDATRRQQVKNFAFDLLQDLYDNEVRYTEELY--DGVGW 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++ + AN+ +G E LF NP +S D +FF + Sbjct: 251 T-EDVKTFLHYNANKALMNLGYEALFPPAMAEVNPAILSALSPNADENH--DFFSGSGSS 307 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 308 YVIGKAVNTEDEDWD 322 >gi|213966196|ref|ZP_03394381.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium amycolatum SK46] gi|213951131|gb|EEB62528.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium amycolatum SK46] Length = 334 Score = 41.9 bits (98), Expect = 0.032, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 50/136 (36%), Gaps = 17/136 (12%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RD+++H + + ++ + +L E LE+ Y+ +GL Sbjct: 204 LRDKAVHGYYSGYKFQRGVETYDTATQRQMKAFVFELLDELYQLELRYSEALY--QPLGL 261 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114 ++++ AN+ +G F + E F E++ + +FF + Sbjct: 262 -YDDVANFIRYNANKALMNLGYPQRFNHDETAFK--PEILAALTPGSDENH-DFFSGSGS 317 Query: 115 EYQQG-----AELKWD 125 Y G A+ WD Sbjct: 318 AYVIGKAEDTADEDWD 333 >gi|81428551|ref|YP_395551.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus sakei subsp. sakei 23K] gi|78610193|emb|CAI55242.1| Ribonucleoside-diphosphate reductase, beta chain [Lactobacillus sakei subsp. sakei 23K] Length = 318 Score = 41.9 bits (98), Expect = 0.032, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 35/95 (36%), Gaps = 6/95 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E +E Q +L++ E Y HE G Sbjct: 188 IRDESVHGTYIGYKFQLGFNELAKAEQEELQNWMYDLLYDLYANEEKYTHEVY--DGTGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP 92 Y+++ AN+ +G LF T NP Sbjct: 246 T-EEVLTYLRYNANKALMNLGQGALFPDTAEDVNP 279 >gi|170684037|ref|YP_001744827.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli SMS-3-5] gi|170521755|gb|ACB19933.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli SMS-3-5] Length = 319 Score = 41.9 bits (98), Expect = 0.032, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKKLEKISLAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 + + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 247 -SDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|116333244|ref|YP_794771.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus brevis ATCC 367] gi|116098591|gb|ABJ63740.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Lactobacillus brevis ATCC 367] Length = 331 Score = 41.9 bits (98), Expect = 0.032, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 3/89 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E ++ + L++ E Y H +G Sbjct: 191 LRDESVHGTYIGYKFQLGMKELTDAEQQQMKDWMYDFLYQLYDNEEKYTHTLY--DQIGW 248 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT 89 ++++ AN+ +G +PLF T Sbjct: 249 T-EKVLTFIRYNANKALMNLGQDPLFPDT 276 >gi|293412034|ref|ZP_06654757.1| ribonucleoside-diphosphate reductase [Escherichia coli B354] gi|291468805|gb|EFF11296.1| ribonucleoside-diphosphate reductase [Escherichia coli B354] Length = 319 Score = 41.9 bits (98), Expect = 0.032, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 A + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|157371959|ref|YP_001479948.1| ribonucleotide-diphosphate reductase subunit beta [Serratia proteamaculans 568] gi|157323723|gb|ABV42820.1| Ribonucleoside-diphosphate reductase [Serratia proteamaculans 568] Length = 323 Score = 41.9 bits (98), Expect = 0.032, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 50/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + ++ + + +L + E+ Y E VG Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKVDAARRQQVKNFAFDLLQDLYDNEVRYTEELY--DGVGW 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++ + AN+ +G E LF + NP +S D +FF + Sbjct: 251 T-EDVKTFLHYNANKALMNLGYEALFPPSMAEVNPAILSALSPNADENH--DFFSGSGSS 307 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 308 YVIGKAVNTEDDDWD 322 >gi|332638431|ref|ZP_08417294.1| ribonucleotide-diphosphate reductase subunit beta [Weissella cibaria KACC 11862] Length = 320 Score = 41.6 bits (97), Expect = 0.033, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 40/112 (35%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E E + +L + E Y +G Sbjct: 188 LRDESVHGTYIGYKFQLGFNELTEDQQSEMKMWMYDLLLDLYNNEEQYTKHLY--DGIGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFF 109 S ++++ AN+ +G +PLF NP M+ + +FF Sbjct: 246 T-ESVLTFLRYNANKALMNLGQDPLFPDGAEDVNPIV-MNGISTTTSNHDFF 295 >gi|256848140|ref|ZP_05553584.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus coleohominis 101-4-CHN] gi|256715200|gb|EEU30177.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus coleohominis 101-4-CHN] Length = 333 Score = 41.6 bits (97), Expect = 0.033, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + + ++ + L+E E Y H +G Sbjct: 191 LRDESVHGTYIGYKFQVGMRQLTEKQQQDMKDWMYNFLYELYDNEGNYTHLLY--DQIGW 248 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 249 T-DDVLTFIRYNANKALMNLGQDPLFPDTASDVNPVV-MNGISTTTSNHDFF 298 >gi|191167101|ref|ZP_03028922.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli B7A] gi|260856787|ref|YP_003230678.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia coli O26:H11 str. 11368] gi|309795135|ref|ZP_07689554.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 145-7] gi|331664233|ref|ZP_08365139.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli TA143] gi|190902883|gb|EDV62611.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli B7A] gi|257755436|dbj|BAI26938.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia coli O26:H11 str. 11368] gi|308121106|gb|EFO58368.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 145-7] gi|323154887|gb|EFZ41079.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia coli EPECa14] gi|331058164|gb|EGI30145.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli TA143] Length = 319 Score = 41.6 bits (97), Expect = 0.033, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115 A + ++ + AN+ +G EPLF NP + + ++N FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|323941488|gb|EGB37671.1| ribonucleotide reductase [Escherichia coli E482] Length = 319 Score = 41.6 bits (97), Expect = 0.034, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 A + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|15803196|ref|NP_289228.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 EDL933] gi|15832793|ref|NP_311566.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 str. Sakai] gi|168750919|ref|ZP_02775941.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4113] gi|168755421|ref|ZP_02780428.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4401] gi|168762471|ref|ZP_02787478.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4501] gi|168768767|ref|ZP_02793774.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4486] gi|168774792|ref|ZP_02799799.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4196] gi|168778658|ref|ZP_02803665.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4076] gi|168787931|ref|ZP_02812938.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC869] gi|168800561|ref|ZP_02825568.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC508] gi|195938430|ref|ZP_03083812.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 str. EC4024] gi|208808703|ref|ZP_03251040.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4206] gi|208813382|ref|ZP_03254711.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4045] gi|208819985|ref|ZP_03260305.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4042] gi|209400851|ref|YP_002272142.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4115] gi|217327155|ref|ZP_03443238.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. TW14588] gi|254794623|ref|YP_003079460.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 str. TW14359] gi|261225973|ref|ZP_05940254.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein [Escherichia coli O157:H7 str. FRIK2000] gi|261256769|ref|ZP_05949302.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein [Escherichia coli O157:H7 str. FRIK966] gi|12517115|gb|AAG57786.1|AE005496_9 ribonucleoside-diphosphate reductase 2, beta chain [Escherichia coli O157:H7 str. EDL933] gi|13363010|dbj|BAB36962.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli O157:H7 str. Sakai] gi|187769524|gb|EDU33368.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4196] gi|188015002|gb|EDU53124.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4113] gi|189003218|gb|EDU72204.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4076] gi|189357305|gb|EDU75724.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4401] gi|189362069|gb|EDU80488.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4486] gi|189367242|gb|EDU85658.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4501] gi|189372097|gb|EDU90513.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC869] gi|189377142|gb|EDU95558.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC508] gi|208728504|gb|EDZ78105.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4206] gi|208734659|gb|EDZ83346.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4045] gi|208740108|gb|EDZ87790.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4042] gi|209162251|gb|ACI39684.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. EC4115] gi|209762240|gb|ACI79432.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli] gi|209762242|gb|ACI79433.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli] gi|209762246|gb|ACI79435.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli] gi|217319522|gb|EEC27947.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli O157:H7 str. TW14588] gi|254594023|gb|ACT73384.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein [Escherichia coli O157:H7 str. TW14359] gi|320189007|gb|EFW63666.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 str. EC1212] gi|320640665|gb|EFX10201.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 str. G5101] gi|326338609|gb|EGD62435.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 str. 1044] gi|326342863|gb|EGD66631.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 str. 1125] Length = 319 Score = 41.6 bits (97), Expect = 0.034, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 A + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|16130590|ref|NP_417162.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein [Escherichia coli str. K-12 substr. MG1655] gi|74313247|ref|YP_311666.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sonnei Ss046] gi|89109469|ref|AP_003249.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like [Escherichia coli str. K-12 substr. W3110] gi|157162127|ref|YP_001459445.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli HS] gi|170019072|ref|YP_001724026.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli ATCC 8739] gi|170082262|ref|YP_001731582.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein [Escherichia coli str. K-12 substr. DH10B] gi|188492563|ref|ZP_02999833.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli 53638] gi|193065983|ref|ZP_03047042.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli E22] gi|193070996|ref|ZP_03051924.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli E110019] gi|194427830|ref|ZP_03060376.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli B171] gi|194439440|ref|ZP_03071516.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli 101-1] gi|209920120|ref|YP_002294204.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli SE11] gi|218696273|ref|YP_002403940.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli 55989] gi|238901820|ref|YP_002927616.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein [Escherichia coli BW2952] gi|256019542|ref|ZP_05433407.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9] gi|256024812|ref|ZP_05438677.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp. 4_1_40B] gi|260845324|ref|YP_003223102.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia coli O103:H2 str. 12009] gi|293448994|ref|ZP_06663415.1| ribonucleoside-diphosphate reductase [Escherichia coli B088] gi|300906827|ref|ZP_07124508.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 84-1] gi|300916824|ref|ZP_07133528.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 115-1] gi|300922750|ref|ZP_07138839.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 182-1] gi|300930529|ref|ZP_07145925.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 187-1] gi|300949072|ref|ZP_07163119.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 116-1] gi|300957447|ref|ZP_07169660.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 175-1] gi|301026690|ref|ZP_07190101.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 196-1] gi|301306007|ref|ZP_07212087.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 124-1] gi|301327384|ref|ZP_07220633.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 78-1] gi|301645345|ref|ZP_07245292.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 146-1] gi|307139368|ref|ZP_07498724.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli H736] gi|307314435|ref|ZP_07594040.1| Ribonucleoside-diphosphate reductase [Escherichia coli W] gi|312973113|ref|ZP_07787286.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia coli 1827-70] gi|331643364|ref|ZP_08344495.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli H736] gi|331669414|ref|ZP_08370260.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli TA271] gi|331678654|ref|ZP_08379328.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli H591] gi|332280666|ref|ZP_08393079.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9] gi|2507306|sp|P37146|RIR4_ECOLI RecName: Full=Ribonucleoside-diphosphate reductase 2 subunit beta; AltName: Full=R2F protein; AltName: Full=Ribonucleotide reductase 2 gi|303325061|pdb|3N37|A Chain A, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From Escherichia Coli gi|303325062|pdb|3N38|A Chain A, Ribonucleotide Reductase Nrdf From Escherichia Coli Soaked With Ferrous Ions gi|303325063|pdb|3N39|B Chain B, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From Escherichia Coli In Complex With Nrdi gi|303325065|pdb|3N39|A Chain A, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From Escherichia Coli In Complex With Nrdi gi|303325067|pdb|3N3A|B Chain B, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From Escherichia Coli In Complex With Reduced Nrdi gi|303325069|pdb|3N3A|A Chain A, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From Escherichia Coli In Complex With Reduced Nrdi gi|303325071|pdb|3N3B|B Chain B, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From Escherichia Coli In Complex With Reduced Nrdi With A Trapped Peroxide gi|303325073|pdb|3N3B|A Chain A, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From Escherichia Coli In Complex With Reduced Nrdi With A Trapped Peroxide gi|1789031|gb|AAC75723.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein [Escherichia coli str. K-12 substr. MG1655] gi|1800064|dbj|BAA16541.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like [Escherichia coli str. K12 substr. W3110] gi|73856724|gb|AAZ89431.1| ribonucleoside-diphosphate reductase 2, beta chain, frag [Shigella sonnei Ss046] gi|157067807|gb|ABV07062.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli HS] gi|169754000|gb|ACA76699.1| Ribonucleoside-diphosphate reductase [Escherichia coli ATCC 8739] gi|169890097|gb|ACB03804.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein [Escherichia coli str. K-12 substr. DH10B] gi|188487762|gb|EDU62865.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli 53638] gi|192926397|gb|EDV81032.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli E22] gi|192955654|gb|EDV86129.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli E110019] gi|194414063|gb|EDX30339.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli B171] gi|194421616|gb|EDX37627.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli 101-1] gi|209762244|gb|ACI79434.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli] gi|209913379|dbj|BAG78453.1| ribonucleoside-diphosphate reductase beta subunit [Escherichia coli SE11] gi|218353005|emb|CAU98821.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like [Escherichia coli 55989] gi|238863480|gb|ACR65478.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein [Escherichia coli BW2952] gi|257760471|dbj|BAI31968.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia coli O103:H2 str. 12009] gi|291322084|gb|EFE61513.1| ribonucleoside-diphosphate reductase [Escherichia coli B088] gi|299879612|gb|EFI87823.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 196-1] gi|300315803|gb|EFJ65587.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 175-1] gi|300401428|gb|EFJ84966.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 84-1] gi|300415890|gb|EFJ99200.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 115-1] gi|300420935|gb|EFK04246.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 182-1] gi|300451458|gb|EFK15078.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 116-1] gi|300461585|gb|EFK25078.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 187-1] gi|300838718|gb|EFK66478.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 124-1] gi|300846038|gb|EFK73798.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 78-1] gi|301076379|gb|EFK91185.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 146-1] gi|306906003|gb|EFN36524.1| Ribonucleoside-diphosphate reductase [Escherichia coli W] gi|309703041|emb|CBJ02373.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli ETEC H10407] gi|310333055|gb|EFQ00269.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia coli 1827-70] gi|315061957|gb|ADT76284.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like [Escherichia coli W] gi|315254452|gb|EFU34420.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 85-1] gi|315615063|gb|EFU95700.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia coli 3431] gi|320198428|gb|EFW73030.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli EC4100B] gi|320656721|gb|EFX24609.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662264|gb|EFX29661.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O55:H7 str. USDA 5905] gi|320667315|gb|EFX34273.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H7 str. LSU-61] gi|323173041|gb|EFZ58672.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia coli LT-68] gi|323183202|gb|EFZ68599.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia coli 1357] gi|323377462|gb|ADX49730.1| Ribonucleoside-diphosphate reductase [Escherichia coli KO11] gi|323935630|gb|EGB31947.1| ribonucleotide reductase [Escherichia coli E1520] gi|323946352|gb|EGB42381.1| ribonucleotide reductase [Escherichia coli H120] gi|323960578|gb|EGB56205.1| ribonucleotide reductase [Escherichia coli H489] gi|323971479|gb|EGB66714.1| ribonucleotide reductase [Escherichia coli TA007] gi|324020305|gb|EGB89524.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 117-3] gi|324120035|gb|EGC13912.1| ribonucleotide reductase [Escherichia coli E1167] gi|331036835|gb|EGI09059.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli H736] gi|331063082|gb|EGI34995.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli TA271] gi|331073484|gb|EGI44805.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli H591] gi|332103018|gb|EGJ06364.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9] gi|332344558|gb|AEE57892.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli UMNK88] Length = 319 Score = 41.6 bits (97), Expect = 0.034, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 A + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|323159821|gb|EFZ45793.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia coli E128010] Length = 319 Score = 41.6 bits (97), Expect = 0.034, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 A + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|218296962|ref|ZP_03497648.1| ribonucleotide reductase [Thermus aquaticus Y51MC23] gi|218242665|gb|EED09201.1| ribonucleotide reductase [Thermus aquaticus Y51MC23] Length = 323 Score = 41.6 bits (97), Expect = 0.034, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 46/119 (38%), Gaps = 4/119 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVGLNA 62 E++H FG++++ ++ E P L+ + F ++ E E A + Sbjct: 194 ENIHGLFGVELLRLLREERPELFGEAFVEEVLRAAQELFRAEEALVDWIFAGGDTPWVRG 253 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQ 118 ++++ N+ GL F+ + W + + K+ +FF R Y + Sbjct: 254 EEVLEFVKDRYNQVLALHGLPGPFQVRDEVLKDTAWFALELLADKDVDFFNKRSVAYAR 312 >gi|238790129|ref|ZP_04633906.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia frederiksenii ATCC 33641] gi|238721798|gb|EEQ13461.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia frederiksenii ATCC 33641] Length = 323 Score = 41.6 bits (97), Expect = 0.034, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 50/129 (38%), Gaps = 12/129 (9%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L + E+ Y + VG Sbjct: 193 IRDEAVHGYYIGYKFQKGLERVDNNRRQEIKNFAFDLLQDLYDNEVRYTEDLYDD--VGW 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114 ++++ + AN+ +G E LF ++ +S I + + +FF + Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPASQAA---VSPAILAALSPNADENHDFFSGSGS 306 Query: 115 EYQQGAELK 123 Y G + Sbjct: 307 SYVIGKAVS 315 >gi|227502192|ref|ZP_03932241.1| ribonucleoside-diphosphate reductase [Corynebacterium accolens ATCC 49725] gi|227077016|gb|EEI14979.1| ribonucleoside-diphosphate reductase [Corynebacterium accolens ATCC 49725] Length = 337 Score = 41.6 bits (97), Expect = 0.035, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 51/136 (37%), Gaps = 17/136 (12%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY-AHETMPKGFVG 59 +RD+++H + + +E ++ + ++ + LE+ Y P G Sbjct: 207 LRDKAVHGYYSGYKFQRGLDHATEARREEMREFTFDLVRKLYDLEMRYSGELYEPYGL-- 264 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVT 114 ++++ AN+ +G LF Y E NP ++ D +FF + Sbjct: 265 --MDDVATFVRYNANKALMNLGYPNLFPYEECQVNPKILAALTPGSDENH--DFFSGSGS 320 Query: 115 EYQQG-----AELKWD 125 Y G ++ WD Sbjct: 321 SYIIGKAVETSDADWD 336 >gi|260869355|ref|YP_003235757.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia coli O111:H- str. 11128] gi|257765711|dbj|BAI37206.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia coli O111:H- str. 11128] gi|323180097|gb|EFZ65649.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia coli 1180] Length = 319 Score = 41.6 bits (97), Expect = 0.035, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 51/128 (39%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y +E + Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTNELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115 A + ++ + AN+ +G EPLF NP + + ++N FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|172041159|ref|YP_001800873.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium urealyticum DSM 7109] gi|171852463|emb|CAQ05439.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium urealyticum DSM 7109] Length = 331 Score = 41.6 bits (97), Expect = 0.036, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 3/90 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + + +E + L + E+ Y +G Sbjct: 201 IRDESVHGYYIGYKYQRALENESPERQEELKGFVVEQLLDLYDNEVEYTESIY--DEIGW 258 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90 ++++++ AN+ + +G + LF E Sbjct: 259 T-EDVKRFLRYNANKAMNNLGYDGLFPVEE 287 >gi|23335914|ref|ZP_00121145.1| COG0208: Ribonucleotide reductase, beta subunit [Bifidobacterium longum DJO10A] gi|189440326|ref|YP_001955407.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium longum DJO10A] gi|189428761|gb|ACD98909.1| Ribonucleotide reductase beta subunit [Bifidobacterium longum DJO10A] Length = 330 Score = 41.6 bits (97), Expect = 0.036, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 47/130 (36%), Gaps = 10/130 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + Q + +L+E E+ Y + + Sbjct: 200 IRDEAVHGYYIGYKYQKGIAQLSDAERLDLQDYTYDLLNELYDNEVEYTQSLYDRVDL-- 257 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115 E+++++ N+ +G LF NP +S D +FF + Sbjct: 258 -TDDVEKFLRYNGNKALMNLGYPALFPAEICDVNPAILAALSPNADENH--DFFSGSGSS 314 Query: 116 YQQGAELKWD 125 Y G + D Sbjct: 315 YVMGKAEETD 324 >gi|254037718|ref|ZP_04871776.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp. 1_1_43] gi|226839342|gb|EEH71363.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp. 1_1_43] Length = 319 Score = 41.6 bits (97), Expect = 0.036, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 A + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|116494955|ref|YP_806689.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus casei ATCC 334] gi|191638466|ref|YP_001987632.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus casei BL23] gi|227535043|ref|ZP_03965092.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239631445|ref|ZP_04674476.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus paracasei subsp. paracasei 8700:2] gi|116105105|gb|ABJ70247.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Lactobacillus casei ATCC 334] gi|190712768|emb|CAQ66774.1| Ribonucleoside-diphosphate reductase, beta chain [Lactobacillus casei BL23] gi|227187358|gb|EEI67425.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239525910|gb|EEQ64911.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus paracasei subsp. paracasei 8700:2] gi|327382498|gb|AEA53974.1| hypothetical protein LC2W_1641 [Lactobacillus casei LC2W] gi|327385696|gb|AEA57170.1| hypothetical protein LCBD_1674 [Lactobacillus casei BD-II] Length = 326 Score = 41.6 bits (97), Expect = 0.037, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 9/113 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P + + +L + E Y ++ K Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEAEQQTLKDWMYDLLFDLYENEEKYTNDLYAKT---- 243 Query: 61 N-APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 N ++++ AN+ +G E F T NP M+ + +FF Sbjct: 244 NWTDEVLTFLRYNANKALMNLGQETAFPDTADDVNPIV-MNGISTSTANHDFF 295 >gi|301066519|ref|YP_003788542.1| ribonucleotide reductase subunit beta [Lactobacillus casei str. Zhang] gi|300438926|gb|ADK18692.1| Ribonucleotide reductase, beta subunit [Lactobacillus casei str. Zhang] Length = 326 Score = 41.6 bits (97), Expect = 0.038, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 9/113 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E P + + +L + E Y ++ K Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEAEQQTLKDWMYDLLFDLYENEEKYTNDLYAKT---- 243 Query: 61 N-APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 N ++++ AN+ +G E F T NP M+ + +FF Sbjct: 244 NWTDEVLTFLRYNANKALMNLGQETAFPDTADDVNPIV-MNGISTSTANHDFF 295 >gi|330971158|gb|EGH71224.1| hypothetical protein PSYAR_11719 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 25 Score = 41.6 bits (97), Expect = 0.038, Method: Composition-based stats. Identities = 17/21 (80%), Positives = 19/21 (90%) Query: 90 ENPFPWMSEVIDLKKEKNFFE 110 NPFPWMSE+I LKKE+NFFE Sbjct: 1 TNPFPWMSEIIALKKERNFFE 21 >gi|311278369|ref|YP_003940600.1| Ribonucleoside-diphosphate reductase [Enterobacter cloacae SCF1] gi|308747564|gb|ADO47316.1| Ribonucleoside-diphosphate reductase [Enterobacter cloacae SCF1] Length = 320 Score = 41.6 bits (97), Expect = 0.038, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 49/135 (36%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + P + + ++ +L E+AY G Sbjct: 190 IRDEAVHGYYIGYKYQKGLEKIPPARREALRNEAVDLLMNLYENELAYTEALY--AQTGW 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF NP +S D +FF + Sbjct: 248 T-EEVKRFLCYNANKALMNLGYEALFPAEMADVNPAILAALSPNADENH--DFFSGSGSS 304 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 305 YVMGKTVGTHDEDWD 319 >gi|47200896|emb|CAF87761.1| unnamed protein product [Tetraodon nigroviridis] Length = 441 Score = 41.6 bits (97), Expect = 0.038, Method: Composition-based stats. Identities = 6/23 (26%), Positives = 15/23 (65%) Query: 52 TMPKGFVGLNAPSCEQYMQFIAN 74 +P +G+N ++Y++F+A+ Sbjct: 419 ALPVKLIGMNCQLMKRYIEFVAD 441 >gi|320173468|gb|EFW48667.1| ribonucleotide-diphosphate reductase subunit beta [Shigella dysenteriae CDC 74-1112] Length = 319 Score = 41.6 bits (97), Expect = 0.039, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKNFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 A + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|328553050|gb|AEB23542.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus amyloliquefaciens TA208] Length = 93 Score = 41.6 bits (97), Expect = 0.039, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 7/87 (8%) Query: 37 MLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPW 95 ML E E+ Y + VGL AP ++++++ AN+ + +G + F+ + NP Sbjct: 1 MLQELYENELEYTEDVY--DQVGL-APDVKKFIRYNANKALNNLGFDHWFEEEDVNPI-- 55 Query: 96 MSEVIDLKKEK-NFFETRVTEYQQGAE 121 + + K + +FF + Y++ Sbjct: 56 VINGLSTKTKSHDFFSMKGVGYKKATV 82 >gi|323978713|gb|EGB73795.1| ribonucleotide reductase [Escherichia coli TW10509] Length = 319 Score = 41.6 bits (97), Expect = 0.040, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISMAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115 A + ++ + AN+ +G EPLF NP + + ++N FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|283835589|ref|ZP_06355330.1| ribonucleoside-diphosphate reductase, beta subunit [Citrobacter youngae ATCC 29220] gi|291068801|gb|EFE06910.1| ribonucleoside-diphosphate reductase, beta subunit [Citrobacter youngae ATCC 29220] Length = 319 Score = 41.6 bits (97), Expect = 0.040, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 47/128 (36%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKGLAHISESAREELKNFALDLLMELYDNEAQYTDELYAETGW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115 A + ++ + AN+ +G E LF NP + + E+N FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEALFPPEMAEVNPA--ILAALSPNAEENHDFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|152964774|ref|YP_001360558.1| ribonucleotide-diphosphate reductase subunit beta [Kineococcus radiotolerans SRS30216] gi|151359291|gb|ABS02294.1| Ribonucleoside-diphosphate reductase [Kineococcus radiotolerans SRS30216] Length = 323 Score = 41.6 bits (97), Expect = 0.040, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 45/128 (35%), Gaps = 12/128 (9%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + E + + +L+E E Y + VGL Sbjct: 193 IRDEAVHGYYIGYKFQRGLELVDQAKRDEIKDYAFELLYELYDNECKYTADLY--DGVGL 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114 + ++ + AN+ +G E +F + I + + +FF + Sbjct: 251 T-EDVKTFLHYNANKALMNLGYEGMFPSD---MTKVDPSILSALSPNADENHDFFSGSGS 306 Query: 115 EYQQGAEL 122 Y G + Sbjct: 307 SYVIGKAV 314 >gi|260448266|gb|ACX38688.1| Ribonucleoside-diphosphate reductase [Escherichia coli DH1] gi|315137289|dbj|BAJ44448.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli DH1] Length = 319 Score = 41.6 bits (97), Expect = 0.041, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKIFLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 A + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|85726187|gb|ABC79616.1| ribonucleotide reductase beta subunit [Borrelia hermsii DAH] Length = 321 Score = 41.6 bits (97), Expect = 0.041, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 50/122 (40%), Gaps = 9/122 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + + + Q+++ +L LE AY + +GL Sbjct: 192 LRDESVHGVFVGLLAQEEFNKMTFKEQAFAQREATLILERLYYLESAYTKDLYSS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEY 116 + ++++ A++ +G + F + NP + + + +FF T+ Y Sbjct: 250 EGA-VDVFVRYNADKALMNLGFDSAFNIRDIDVNPL--VLNGLRTNTKTHDFFSTKGNGY 306 Query: 117 QQ 118 + Sbjct: 307 IK 308 >gi|57014145|gb|AAT68710.2| ribonucleoside reductase beta subunit [Borrelia hermsii] Length = 321 Score = 41.6 bits (97), Expect = 0.041, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 50/122 (40%), Gaps = 9/122 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H F + + + Q+++ +L LE AY + +GL Sbjct: 192 LRDESVHGVFVGLLAQEEFNKMTFKEQAFAQREATLILERLYYLESAYTKDLYSS--IGL 249 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEY 116 + ++++ A++ +G + F + NP + + + +FF T+ Y Sbjct: 250 EGA-VDVFVRYNADKALMNLGFDSAFNIRDIDVNPL--VLNGLRTNTKTHDFFSTKGNGY 306 Query: 117 QQ 118 + Sbjct: 307 IK 308 >gi|306834752|ref|ZP_07467817.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium accolens ATCC 49726] gi|304569364|gb|EFM44864.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium accolens ATCC 49726] Length = 337 Score = 41.2 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 51/136 (37%), Gaps = 17/136 (12%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY-AHETMPKGFVG 59 +RD+++H + + +E ++ + ++ + LE+ Y P G Sbjct: 207 LRDKAVHGYYSGYKFQRGLDHATEDRREEMREFTFDLVRKLYDLEMRYSGELYEPYGL-- 264 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVT 114 ++++ AN+ +G LF Y E NP ++ D +FF + Sbjct: 265 --MDDVATFVRYNANKALMNLGYPNLFPYEECQVNPKILAALTPGSDENH--DFFSGSGS 320 Query: 115 EYQQG-----AELKWD 125 Y G ++ WD Sbjct: 321 SYIIGKAVETSDADWD 336 >gi|28377561|ref|NP_784453.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus plantarum WCFS1] gi|254555734|ref|YP_003062151.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus plantarum JDM1] gi|300769755|ref|ZP_07079637.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308179714|ref|YP_003923842.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus plantarum subsp. plantarum ST-III] gi|28270393|emb|CAD63296.1| ribonucleoside-diphosphate reductase, beta chain [Lactobacillus plantarum WCFS1] gi|254044661|gb|ACT61454.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus plantarum JDM1] gi|300492663|gb|EFK27849.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045205|gb|ADN97748.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus plantarum subsp. plantarum ST-III] Length = 336 Score = 41.2 bits (96), Expect = 0.044, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + + EF+ L++ E Y H +G Sbjct: 202 LRDESVHGTYIGYKFQLGFKDRSEKQQAEFKDWMFDFLYKLYENEENYIHLVY--DQIGW 259 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 + + ++ AN+ +G + LF T NP M+ + +FF Sbjct: 260 S-DEVLTFSRYNANKALMNLGQDALFPDTAEDVNPVV-MNGISTGTSNHDFF 309 >gi|187734239|ref|YP_001881572.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii CDC 3083-94] gi|187431231|gb|ACD10505.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella boydii CDC 3083-94] Length = 319 Score = 41.2 bits (96), Expect = 0.044, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETSW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 A + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|323188442|gb|EFZ73728.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia coli RN587/1] Length = 319 Score = 41.2 bits (96), Expect = 0.046, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 50/128 (39%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISLAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115 + + ++ + AN+ +G EPLF NP + + ++N FF + Sbjct: 247 -SDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|116617385|ref|YP_817756.1| ribonucleotide-diphosphate reductase subunit beta [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096232|gb|ABJ61383.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 325 Score = 41.2 bits (96), Expect = 0.049, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 11/91 (12%) Query: 1 MRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56 +RDES+H + N+I E E Q +L+E E Y HE Sbjct: 193 IRDESVHGTYIGYKFQIGFNKISAEERT----ELQSWMYDLLYELYENEEKYTHELYDD- 247 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK 87 +G ++++ AN+ +G EP+F Sbjct: 248 -LGWT-EQVLTFLRYNANKALMNLGQEPMFP 276 >gi|238755711|ref|ZP_04617045.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia ruckeri ATCC 29473] gi|238706078|gb|EEP98461.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia ruckeri ATCC 29473] Length = 323 Score = 41.2 bits (96), Expect = 0.051, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 53/136 (38%), Gaps = 17/136 (12%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + +E + + +L + E+ Y E VG Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKVDAVRRQEIKNFTFELLQDLYDNEVRYTEELY--DGVGW 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114 + ++++ + AN+ +G E LF E +S I + + +FF + Sbjct: 251 S-EDVKKFLHYNANKALMNLGYEALFPANEVT---VSAAILSALSPNADENHDFFSGSGS 306 Query: 115 EYQQGAEL-----KWD 125 Y G + WD Sbjct: 307 SYVIGKAVNTEDDDWD 322 >gi|227431268|ref|ZP_03913322.1| ribonucleotide-diphosphate reductase subunit beta [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227353030|gb|EEJ43202.1| ribonucleotide-diphosphate reductase subunit beta [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 327 Score = 41.2 bits (96), Expect = 0.051, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 11/91 (12%) Query: 1 MRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56 +RDES+H + N+I E E Q +L+E E Y HE Sbjct: 195 IRDESVHGTYIGYKFQIGFNKISAEERT----ELQSWMYDLLYELYENEEKYTHELYDD- 249 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK 87 +G ++++ AN+ +G EP+F Sbjct: 250 -LGWT-EQVLTFLRYNANKALMNLGQEPMFP 278 >gi|213965886|ref|ZP_03394077.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium amycolatum SK46] gi|213951464|gb|EEB62855.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium amycolatum SK46] Length = 338 Score = 41.2 bits (96), Expect = 0.052, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 49/133 (36%), Gaps = 11/133 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + E + + ++ + EI Y E +G Sbjct: 208 IRDEAVHGYYIGYKYQRNLERLTQAERDELKDYTFDLMFDLYDNEIQYTEEMY--DELGW 265 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-PFPWMSEVIDLKKEKN--FFETRVTEYQ 117 ++++++ N+ + +G E +F E P + + ++N FF + Y Sbjct: 266 T-EDVKRFLRYNGNKALNNLGYEGMFPADETRVSPSILSALSPNADENHDFFSGSGSSYV 324 Query: 118 QGAE-----LKWD 125 G WD Sbjct: 325 MGKAEVTQDEDWD 337 >gi|331701739|ref|YP_004398698.1| ribonucleoside-diphosphate reductase [Lactobacillus buchneri NRRL B-30929] gi|329129082|gb|AEB73635.1| Ribonucleoside-diphosphate reductase [Lactobacillus buchneri NRRL B-30929] Length = 318 Score = 41.2 bits (96), Expect = 0.053, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + + P ++ + L++ E Y H G Sbjct: 189 LRDESVHGTYIGYKFQIGYNQLPKEKQEDMKNWIYDFLYKLYGNEEKYTHILY--DQTGW 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 ++++ AN+ +G +PLF T NP M+ + +FF Sbjct: 247 T-EDVLTFIRYNANKALMNLGQDPLFPDTAEDVNPVV-MNGISTSTANHDFF 296 >gi|238759171|ref|ZP_04620339.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia aldovae ATCC 35236] gi|238702587|gb|EEP95136.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia aldovae ATCC 35236] Length = 323 Score = 41.2 bits (96), Expect = 0.056, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 53/136 (38%), Gaps = 17/136 (12%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + E + + +L + E+ Y + K VG Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKVDNARRLEIKNFAFDLLQDLYDNEVRYTEDLYDK--VGW 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114 ++++ + AN+ +G E LF ++ +S I + + +FF + Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPISQAA---VSPAILAALSPNADENHDFFSGSGS 306 Query: 115 EYQQGAEL-----KWD 125 Y G + WD Sbjct: 307 SYVIGKAVNTEDEDWD 322 >gi|253772463|ref|YP_003035294.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162613|ref|YP_003045721.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli B str. REL606] gi|297519661|ref|ZP_06938047.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli OP50] gi|242378238|emb|CAQ33013.1| nrdF, subunit of ribonucleoside-diphosphate reductase 2, beta subunit dimer and ribonucleoside-diphosphate reductase 2 [Escherichia coli BL21(DE3)] gi|253323507|gb|ACT28109.1| Ribonucleoside-diphosphate reductase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974514|gb|ACT40185.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli B str. REL606] gi|253978681|gb|ACT44351.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli BL21(DE3)] Length = 319 Score = 40.8 bits (95), Expect = 0.056, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 A + ++ + AN+ +G +PLF NP +S D +FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLGYKPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|32491358|ref|NP_871612.1| ribonucleotide-diphosphate reductase subunit beta [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166565|dbj|BAC24755.1| nrdF [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 324 Score = 40.8 bits (95), Expect = 0.058, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 52/130 (40%), Gaps = 9/130 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + I K + + +L++ EI Y ++ K + + Sbjct: 194 IRDEAVHGYYIGYKFQKDLISLNEKEKKNIKDFAFNLLYKLYENEINY-SYSLYKDIIPI 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVI-DLKKEKNFFETRVTEY 116 + ++ + AN+ +G E F E NP +S + + + +FF + Y Sbjct: 253 --KNIISFLNYNANKSLMNLGYEQYFPDDESLVNP-DILSALTPNSNENHDFFSGSGSSY 309 Query: 117 QQG-AELKWD 125 G L D Sbjct: 310 VMGKTVLTKD 319 >gi|10957415|ref|NP_051641.1| ribonucleotide-diphosphate reductase subunit beta [Deinococcus radiodurans R1] gi|6460844|gb|AAF12548.1|AE001826_17 ribonucleoside-diphosphate reductase, beta chain [Deinococcus radiodurans R1] Length = 354 Score = 40.8 bits (95), Expect = 0.060, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 15/122 (12%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLL----EIAYAHETMPKGFV 58 DE+LH + + E Q ++ + E+AY + V Sbjct: 217 DEALHGV----YVALLAQEKFATMNAAEQADAQAWFDDTLQALYSNELAYTEQLYAN--V 270 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEY 116 GL +++++F N + L F + NP + I + +FF + + Y Sbjct: 271 GLTGE-VKKFIRFNFNVLADNLALPRPFGDEDINPI--VQNGIQARGTTHDFFSAKGSSY 327 Query: 117 QQ 118 + Sbjct: 328 SK 329 >gi|237785987|ref|YP_002906692.1| ribonucleoside-diphosphate reductase subunit beta [Corynebacterium kroppenstedtii DSM 44385] gi|237758899|gb|ACR18149.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium kroppenstedtii DSM 44385] Length = 336 Score = 40.8 bits (95), Expect = 0.062, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 38/90 (42%), Gaps = 3/90 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + ++ + +L+E E Y + +G Sbjct: 206 IRDEAVHGYYIGYKYQRGQEALTQSERDGLKEYTFDLLYELYDNETQYTEDLY--DELGW 263 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90 ++++++ AN+ + +G E LF E Sbjct: 264 T-EDVKRFLRYNANKALNNLGYEALFPADE 292 >gi|293394770|ref|ZP_06639061.1| ribonucleotide-diphosphate reductase subunit beta [Serratia odorifera DSM 4582] gi|291422721|gb|EFE95959.1| ribonucleotide-diphosphate reductase subunit beta [Serratia odorifera DSM 4582] Length = 319 Score = 40.8 bits (95), Expect = 0.068, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 48/128 (37%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + ++ + + +L + E+ Y E VG Sbjct: 189 IRDEAVHGYYIGYKFQKGLEQVSATRRQQVKSFAFDLLQDLYDNEVRYTEELYDD--VGW 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++ + AN+ +G E LF + NP +S D +FF + Sbjct: 247 T-EDVKTFLHYNANKALMNLGYEALFPPSMAEVNPAILSALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G + Sbjct: 304 YVMGKAVN 311 >gi|323341317|ref|ZP_08081561.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus ruminis ATCC 25644] gi|323091194|gb|EFZ33822.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus ruminis ATCC 25644] Length = 317 Score = 40.4 bits (94), Expect = 0.077, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 47/116 (40%), Gaps = 15/116 (12%) Query: 1 MRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56 +RDES+H + + E ++ + + +L++ E Y HE Sbjct: 188 LRDESVHGTYIGYKFQIRYRALAEEE----QEKLKFEIVNLLYDLYQNEEKYTHELY--D 241 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109 +G ++++ AN+ +G EPLF+ T NP M+ + +FF Sbjct: 242 ELGWT-EDVGIFLRYNANKALMNLGFEPLFEETATDVNPVV-MNGISTSTSNHDFF 295 >gi|118586508|ref|ZP_01543952.1| ribonucleoside-diphosphate reductase 2, beta subunit [Oenococcus oeni ATCC BAA-1163] gi|118433072|gb|EAV39794.1| ribonucleoside-diphosphate reductase 2, beta subunit [Oenococcus oeni ATCC BAA-1163] Length = 337 Score = 40.4 bits (94), Expect = 0.086, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 3/86 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E KE + +L++ E Y H+ + Sbjct: 194 IRDESVHGTYIGYKFQLAYKELTEQEQKELNSWAYDLLYDLYDNEEKYTHQ-LYDEIDWF 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLF 86 ++++ N+ +GLEP+F Sbjct: 253 --DDVMIFLRYNGNKALMNLGLEPMF 276 >gi|67592960|ref|XP_665685.1| ribonucleotide reductase small subunit [Cryptosporidium hominis TU502] gi|54656484|gb|EAL35456.1| ribonucleotide reductase small subunit [Cryptosporidium hominis] Length = 369 Score = 40.4 bits (94), Expect = 0.087, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 8/92 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE + F I + + TK + +L +A +LE + + + + Sbjct: 239 RDEQYQVEF-CLSIAE------SMKTKPSNDQVVNLLEQAIMLEKNFIFSIVDPQVLQIE 291 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPF 93 ++ F A+ + F + NPF Sbjct: 292 REDIVAFLLFNADEILVDLKYPRQFNVS-NPF 322 >gi|66391280|ref|YP_238601.1| ORF025 [Staphylococcus phage Twort] gi|62637210|gb|AAX92321.1| ORF025 [Staphylococcus phage Twort] Length = 349 Score = 40.0 bits (93), Expect = 0.098, Method: Composition-based stats. Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 17/124 (13%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET----MPKGFV 58 DE+ H G+ V +++ L T+E Q K+ +++E LLE+ Y +E M + Sbjct: 211 DEAYH---GVGVGYTAQLDYQEL-TEEEQSKADALMYE--LLEVLYENEVSYSHMLYDKL 264 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKN--FFETRVTE 115 GL +Y+Q+ NR +G + F NP ++ ++ K N FF T+ + Sbjct: 265 GLT-EDVIRYVQYNFNRALANLGFDDYFNPEPFNPI--VNNQTNVDKLSNADFFSTKN-D 320 Query: 116 YQQG 119 Y++ Sbjct: 321 YKRS 324 >gi|162448128|ref|YP_001621260.1| ribonucleoside-diphosphate reductase subunit beta [Acholeplasma laidlawii PG-8A] gi|161986235|gb|ABX81884.1| ribonucleoside-diphosphate reductase, beta chain [Acholeplasma laidlawii PG-8A] Length = 369 Score = 40.0 bits (93), Expect = 0.099, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 48/125 (38%), Gaps = 17/125 (13%) Query: 1 MRDESLHL----NFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLL-EIAYAHETMPK 55 +RDES+H +V E T+ + HE L E Y + Sbjct: 230 LRDESIHGLYVGRLAQEVFETFSNELQEQLTQWVHDFLLELYHEQNELVESIYDAVEL-- 287 Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRV 113 + + ++++ AN+ +G +P F+ + NP + ++ + + + F + Sbjct: 288 ------SHDVKIFVRYNANKALMNLGFDPYFEPEDVNPV--VLNGLNTETKTMDNFSMKG 339 Query: 114 TEYQQ 118 YQ+ Sbjct: 340 NGYQK 344 >gi|156086328|ref|XP_001610573.1| ribonucleoside-diphosphate reductase beta subunit [Babesia bovis T2Bo] gi|154797826|gb|EDO07005.1| ribonucleoside-diphosphate reductase beta subunit, putative [Babesia bovis] Length = 329 Score = 40.0 bits (93), Expect = 0.099, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 7/68 (10%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 D S+HL F + + +K+ + ++ +L+ A LE+AY +P +GL+ Sbjct: 207 DVSIHLKFAMAALEHLKL-------RPTRETVMELLNSAYDLEMAYCRSVLPMDHMGLSE 259 Query: 63 PSCEQYMQ 70 QY++ Sbjct: 260 YHLSQYIK 267 >gi|325284717|ref|YP_004264180.1| Ribonucleoside-diphosphate reductase [Deinococcus proteolyticus MRP] gi|324316206|gb|ADY27320.1| Ribonucleoside-diphosphate reductase [Deinococcus proteolyticus MRP] Length = 348 Score = 40.0 bits (93), Expect = 0.10, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 7/118 (5%) Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62 DE++H + + + E L + E+AY VGL Sbjct: 198 DEAVHGVYVALLAQEKFAEMNEAEQAYALAWYEETLMKLYRNELAYTEMLYAD--VGL-V 254 Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118 ++++++ N +G+E F+ E NP + I K +FF + Y + Sbjct: 255 DEVKKFIRYNCNVLADNLGVERSFEDEEINPI--VRNGIKAKGTTHDFFSAKGNSYAK 310 >gi|184156148|ref|YP_001844488.1| ribonucleoside-diphosphate reductase beta subunit [Lactobacillus fermentum IFO 3956] gi|227515317|ref|ZP_03945366.1| ribonucleoside-diphosphate reductase [Lactobacillus fermentum ATCC 14931] gi|260662379|ref|ZP_05863274.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus fermentum 28-3-CHN] gi|183227492|dbj|BAG28008.1| ribonucleoside-diphosphate reductase beta subunit [Lactobacillus fermentum IFO 3956] gi|227086331|gb|EEI21643.1| ribonucleoside-diphosphate reductase [Lactobacillus fermentum ATCC 14931] gi|260553070|gb|EEX26013.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus fermentum 28-3-CHN] gi|299783625|gb|ADJ41623.1| Ribonucleoside-diphosphate reductase beta subunit [Lactobacillus fermentum CECT 5716] Length = 316 Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 43/114 (37%), Gaps = 10/114 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVG 59 +RDES+H + Q E F+ +L + E A+ P V Sbjct: 186 IRDESVHGTYLGYKFQQAFAELTPDEQTRFRAWMDDLLADLLENEFAFTEVVYAPIQMV- 244 Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEKNFF 109 +Q++++ AN+ + +G +F + NP M+ + +FF Sbjct: 245 ---EDVKQFVRYNANKAMNNMGFAAIFNHAAIEDINPIV-MNGISTETANHDFF 294 >gi|300934659|ref|ZP_07149915.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium resistens DSM 45100] Length = 332 Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 16/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RD+++H + + +P T E + + +L + LE+ Y+ E +GL Sbjct: 203 LRDKAVHGYYSGYKFQRGLENHPE-RTAELSEFTHALLEKLFELEVLYSAELY--EPLGL 259 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID-----LKKEKNFFETRVTE 115 P +++++ AN+ +G P F E E++ + +FF + Sbjct: 260 -MPDVVKFVKYNANKALMNLGYHPHFAAEETDVS--PEILSALTPGADENHDFFSGSGSS 316 Query: 116 YQQG-----AELKWD 125 Y G A+ WD Sbjct: 317 YIMGKAEETADTDWD 331 >gi|24113980|ref|NP_708490.1| ribonucleotide-diphosphate reductase subunit beta [Shigella flexneri 2a str. 301] gi|30064043|ref|NP_838214.1| ribonucleotide-diphosphate reductase subunit beta [Shigella flexneri 2a str. 2457T] gi|110806691|ref|YP_690211.1| ribonucleotide-diphosphate reductase subunit beta [Shigella flexneri 5 str. 8401] gi|24053093|gb|AAN44197.1| ribonucleoside-diphosphate reductase 2, beta chain [Shigella flexneri 2a str. 301] gi|30042299|gb|AAP18024.1| ribonucleoside-diphosphate reductase 2, beta chain [Shigella flexneri 2a str. 2457T] gi|110616239|gb|ABF04906.1| ribonucleoside-diphosphate reductase 2, beta chain [Shigella flexneri 5 str. 8401] gi|281602052|gb|ADA75036.1| Ribonucleoside-diphosphate reductase 2, beta chain [Shigella flexneri 2002017] gi|313648326|gb|EFS12770.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella flexneri 2a str. 2457T] gi|332753393|gb|EGJ83773.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella flexneri 4343-70] gi|332753901|gb|EGJ84276.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella flexneri K-671] gi|332755661|gb|EGJ86024.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella flexneri 2747-71] gi|332765626|gb|EGJ95839.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Shigella flexneri 2930-71] gi|332999413|gb|EGK18998.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella flexneri VA-6] gi|333000691|gb|EGK20268.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella flexneri K-218] gi|333015924|gb|EGK35260.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella flexneri K-304] Length = 319 Score = 39.6 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 48/128 (37%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 A + ++ + N+ +G EPLF NP +S D +FF + Sbjct: 247 -ADDVKAFLCYNTNKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|333001013|gb|EGK20583.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella flexneri K-272] gi|333015483|gb|EGK34822.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella flexneri K-227] Length = 319 Score = 39.6 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 48/128 (37%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 A + ++ + N+ +G EPLF NP +S D +FF + Sbjct: 247 -ADDVKAFLCYNTNKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|323167149|gb|EFZ52867.1| ribonucleoside-diphosphate reductase 2 subunit beta domain protein [Shigella sonnei 53G] Length = 150 Score = 39.6 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 20 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 77 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 A + ++ + AN+ +G EPLF NP +S D +FF + Sbjct: 78 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 134 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 135 YVMGKAVE 142 >gi|319948549|ref|ZP_08022680.1| ribonucleotide-diphosphate reductase subunit beta [Dietzia cinnamea P4] gi|319437796|gb|EFV92785.1| ribonucleotide-diphosphate reductase subunit beta [Dietzia cinnamea P4] Length = 338 Score = 39.6 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 11/133 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + E + + +L E E Y + VG Sbjct: 208 IRDEAVHGYYIGYKYQRGLEHVTQAERDELKDYTFELLFELYDNEADYTEDLY--DPVGW 265 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVI-DLKKEKNFFETRVTEYQ 117 ++++++ AN+ +G E +F E +S + + + +FF + Y Sbjct: 266 T-EDVKKFLRYNANKALMNMGYEGMFPKDETDVDPAILSALSPNADENHDFFSGSGSSYV 324 Query: 118 QGAE-----LKWD 125 G WD Sbjct: 325 MGKAEATEDEDWD 337 >gi|126649263|ref|XP_001388304.1| ribonucleotide reductase small subunit [Cryptosporidium parvum Iowa II] gi|126117398|gb|EAZ51498.1| ribonucleotide reductase small subunit [Cryptosporidium parvum Iowa II] Length = 339 Score = 39.6 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 8/92 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE + F I + + TK + +L +A +LE + + + + Sbjct: 239 RDEQYQVEF-CLSIAK------SMKTKPSNDQVVNLLEQAIMLEKNFIFSIVDPQVLQIE 291 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPF 93 ++ F A+ + F + NPF Sbjct: 292 REDIVAFLLFNADEILVDLKYPRQFNVS-NPF 322 >gi|209762238|gb|ACI79431.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli] gi|320646030|gb|EFX15007.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H- str. 493-89] gi|320651330|gb|EFX19761.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli O157:H- str. H 2687] Length = 319 Score = 39.6 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 14/130 (10%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58 +RDE++H + K +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIG--YKHQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW 246 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRV 113 A + ++ + AN+ +G EPLF NP + + ++N FF Sbjct: 247 ---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSG 301 Query: 114 TEYQQGAELK 123 + Y G ++ Sbjct: 302 SSYVMGKAVE 311 >gi|251788642|ref|YP_003003363.1| Ribonucleoside-diphosphate reductase [Dickeya zeae Ech1591] gi|247537263|gb|ACT05884.1| Ribonucleoside-diphosphate reductase [Dickeya zeae Ech1591] Length = 320 Score = 39.6 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + Q ++ Q + +L E+ Y HE VG Sbjct: 190 IRDEAVHGYYIGYKYQQGLKRLSTPEQRDLQLFAYELLQTLYDNEVDYTHELY--DSVGW 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN--FFETRVTE 115 + + ++ + AN+ +G E LF NP + + E+N FF + Sbjct: 248 SGDVIK-FLHYNANKALMNLGYEALFPADMTDVNPA--ILAALSPGAEENHDFFSGAGSS 304 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 305 YVIGKAVE 312 >gi|223954268|gb|ACN30264.1| UL40 [Anatid herpesvirus 1] Length = 46 Score = 39.6 bits (92), Expect = 0.15, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%) Query: 80 IGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAELKW 124 IGL PLF + + ++ NFFE R T Y G+ L Sbjct: 2 IGLAPLFDEPPPKHDFPLAFMATSQQTNFFERRNTTYA-GSVLND 45 >gi|319440834|ref|ZP_07989990.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium variabile DSM 44702] Length = 316 Score = 39.6 bits (92), Expect = 0.15, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 45/124 (36%), Gaps = 6/124 (4%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE +H + + + + +L + E AY +G Sbjct: 186 IRDEVVHGYYIGYKYQVGMAGWSSAEQQAIKDEVFDLLLDLYDNECAYTETLY--DELGW 243 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-PFPWMSEVID--LKKEKNFFETRVTEYQ 117 ++++++ AN+ + +G E +F E P + +D + +FF + Y Sbjct: 244 T-EDVKRFLRYNANKALNNLGYEGVFPQDECRVSPAILASLDPGANENHDFFSGSGSAYT 302 Query: 118 QGAE 121 G Sbjct: 303 IGTA 306 >gi|323342959|ref|ZP_08083190.1| ribonucleotide-diphosphate reductase subunit beta [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463023|gb|EFY08218.1| ribonucleotide-diphosphate reductase subunit beta [Erysipelothrix rhusiopathiae ATCC 19414] Length = 358 Score = 39.6 bits (92), Expect = 0.16, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 50/133 (37%), Gaps = 17/133 (12%) Query: 1 MRDESLHL----NFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56 +RDES+H N +++ + E + + E L A P Sbjct: 224 LRDESIHGLYIGNLAMELYRKFDAETQASLYEWLTTYLDAIYEEEVELIEAIYD---PVE 280 Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVT 114 + + ++++ AN+ +G + ++Y E NP + ++ + + + F + Sbjct: 281 L----SHDVKIFVRYNANKAMMNLGFDAYYEYEEVNPV--VLNGLNTETKTMDNFSMKGN 334 Query: 115 EYQ--QGAELKWD 125 YQ + L D Sbjct: 335 GYQKMKSESLHDD 347 >gi|323508655|dbj|BAJ77221.1| cgd6_700 [Cryptosporidium parvum] Length = 285 Score = 39.6 bits (92), Expect = 0.16, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 8/92 (8%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61 RDE + F I + + TK + +L +A +LE + + + + Sbjct: 185 RDEQYQVEF-CLSIAK------SMKTKPSNDQVVNLLEQAIMLEKNFIFSIVDPQVLQIE 237 Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPF 93 ++ F A+ + F + NPF Sbjct: 238 REDIVAFLLFNADEILVDLKYPRQFNVS-NPF 268 >gi|296086891|emb|CBI33064.3| unnamed protein product [Vitis vinifera] Length = 301 Score = 39.2 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 9/18 (50%) Query: 2 RDESLHLNFGIDVINQIK 19 RDE LH +F + K Sbjct: 35 RDEGLHCDFACLLYKNRK 52 >gi|329296713|ref|ZP_08254049.1| ribonucleoside-diphosphate reductase [Plautia stali symbiont] Length = 319 Score = 39.2 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 44/128 (34%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + E QQ + +L E+ Y VG Sbjct: 189 IRDEAVHGYYIGYKYQKALETVDDARRAELQQFAIELLLALYENEVVYTEALYAD--VGW 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++ + AN+ +G E L NP +S D +FF + Sbjct: 247 T-EEVKTFLHYNANKALMNLGYEALSPAELTAVNPAILSALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|296104353|ref|YP_003614499.1| ribonucleotide-diphosphate reductase subunit beta [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058812|gb|ADF63550.1| ribonucleotide-diphosphate reductase subunit beta [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 319 Score = 39.2 bits (91), Expect = 0.19, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 50/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + + +E + + +L + E++Y E Sbjct: 189 IRDEAVHGYYIGYKYQKGLEKVSDVRREELKGFALDLLMDLYDNELSYTEELYAGTGW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++ + AN+ +G E LF NP +S D +FF + Sbjct: 247 -EEEVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK-----WD 125 Y G ++ WD Sbjct: 304 YVMGKAVETEDEDWD 318 >gi|157159438|ref|YP_001463986.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli E24377A] gi|218555224|ref|YP_002388137.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli IAI1] gi|300815921|ref|ZP_07096145.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 107-1] gi|157081468|gb|ABV21176.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli E24377A] gi|218361992|emb|CAQ99598.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like [Escherichia coli IAI1] gi|300531850|gb|EFK52912.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia coli MS 107-1] Length = 319 Score = 39.2 bits (91), Expect = 0.19, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 48/128 (37%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 A + ++ + AN+ + EPLF NP +S D +FF + Sbjct: 247 -ADDVKAFLCYNANKALMNLDYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|116490256|ref|YP_809800.1| ribonucleotide-diphosphate reductase subunit beta [Oenococcus oeni PSU-1] gi|290889638|ref|ZP_06552728.1| hypothetical protein AWRIB429_0118 [Oenococcus oeni AWRIB429] gi|116090981|gb|ABJ56135.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Oenococcus oeni PSU-1] gi|290480836|gb|EFD89470.1| hypothetical protein AWRIB429_0118 [Oenococcus oeni AWRIB429] Length = 337 Score = 39.2 bits (91), Expect = 0.21, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 34/86 (39%), Gaps = 3/86 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E K+ + +L++ E Y H+ + Sbjct: 194 IRDESVHGTYIGYKFQLAYKELTEQEQKDLNSWAYDLLYDLYDNEEKYTHQ-LYDEIDWF 252 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLF 86 ++++ N+ +GLEP+F Sbjct: 253 --DDVMIFLRYNGNKALMNLGLEPMF 276 >gi|260599071|ref|YP_003211642.1| ribonucleotide-diphosphate reductase subunit beta [Cronobacter turicensis z3032] gi|260218248|emb|CBA33173.1| Ribonucleoside-diphosphate reductase 2 subunit beta [Cronobacter turicensis z3032] Length = 320 Score = 38.9 bits (90), Expect = 0.28, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 49/134 (36%), Gaps = 13/134 (9%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + Q + + + + ++ E E+AY VG Sbjct: 190 IRDEAVHGYYIGYKYQQGLAQVDDARRESLKTFALDLMMELYDNELAYTEALYRD--VGW 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEK-NFFETRVTEY 116 ++ + AN+ +G E LF NP ++ + E +FF + Y Sbjct: 248 -VDDVSAFLCYNANKALMNLGYEALFPPEMAQVNP-SILAALSPGADENHDFFSGSGSSY 305 Query: 117 QQGAELK-----WD 125 G ++ WD Sbjct: 306 VMGKAVETEDADWD 319 >gi|237729635|ref|ZP_04560116.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter sp. 30_2] gi|226908241|gb|EEH94159.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter sp. 30_2] Length = 319 Score = 38.9 bits (90), Expect = 0.28, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 45/128 (35%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L E E Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKGLEHISESAREELKNFAFDLLMELYDNEARYTEELYAETGW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++ + AN+ +G E LF NP +S D +FF + Sbjct: 247 -VDDVKAFLCYNANKALMNLGYEALFPPEMAEVNPTILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAVE 311 >gi|146312797|ref|YP_001177871.1| ribonucleotide-diphosphate reductase subunit beta [Enterobacter sp. 638] gi|145319673|gb|ABP61820.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Enterobacter sp. 638] Length = 319 Score = 38.5 bits (89), Expect = 0.29, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 49/135 (36%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L + E++Y E Sbjct: 189 IRDEAVHGYYIGYKYQKGLEKISEAKREELKGFALDLLMDLYDNELSYTEELYAGTSW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++ + AN+ +G E LF NP +S D +FF + Sbjct: 247 -ETDVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK-----WD 125 Y G ++ WD Sbjct: 304 YVMGKAVETEDADWD 318 >gi|328958551|ref|YP_004375937.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium sp. 17-4] gi|328674875|gb|AEB30921.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium sp. 17-4] Length = 328 Score = 38.5 bits (89), Expect = 0.30, Method: Composition-based stats. Identities = 11/86 (12%), Positives = 28/86 (32%), Gaps = 3/86 (3%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63 ESLH + E E + + + + E+ Y + + Sbjct: 201 ESLHCFYISHKFQLGFSELSQQEQTELRDWTFDLFVDLVNNELNYIEQIYYRTDW---LE 257 Query: 64 SCEQYMQFIANRRCHQIGLEPLFKYT 89 + +++ AN +G + ++ + Sbjct: 258 EVKDFIRQQANNALKSLGFDTIYPES 283 >gi|156932794|ref|YP_001436710.1| ribonucleotide-diphosphate reductase subunit beta [Cronobacter sakazakii ATCC BAA-894] gi|156531048|gb|ABU75874.1| hypothetical protein ESA_00590 [Cronobacter sakazakii ATCC BAA-894] Length = 320 Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 49/134 (36%), Gaps = 13/134 (9%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + Q + + + S ++ E E+AY VG Sbjct: 190 IRDEAVHGYYIGYKYQQALAQVDDARRESLKTFSLDLMMELYDNELAYTEALYRD--VGW 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEK-NFFETRVTEY 116 ++ + AN+ +G E LF NP ++ + E +FF + Y Sbjct: 248 -VDDVSAFLCYNANKALMNLGYEALFPPEMAQVNP-SILAALSPGADENHDFFSGSGSSY 305 Query: 117 QQGAELK-----WD 125 G ++ WD Sbjct: 306 VMGKAVETEDEDWD 319 >gi|328713560|ref|XP_003245116.1| PREDICTED: ribonucleoside-diphosphate reductase small chain-like [Acyrthosiphon pisum] Length = 62 Score = 38.1 bits (88), Expect = 0.39, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 5/65 (7%) Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116 VG + ++ A+ + G +PF E+ + + NFFE R++++ Sbjct: 1 MVGKSCEKIH--IEDFADGLLKESGFLQFTGRQTHPF---MELTSQQGKTNFFERRLSKH 55 Query: 117 QQGAE 121 Q + Sbjct: 56 QLSSV 60 >gi|157148214|ref|YP_001455533.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter koseri ATCC BAA-895] gi|157085419|gb|ABV15097.1| hypothetical protein CKO_04025 [Citrobacter koseri ATCC BAA-895] Length = 319 Score = 38.1 bits (88), Expect = 0.39, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + E + + +L E E Y E + Sbjct: 189 IRDEAVHGYYIGYKYQKGLEKLSESERDELKHFALDLLMELYDNESRYTEELYAETGW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 ++ + AN+ +G E LF NP +S D +FF + Sbjct: 247 -VADVNAFLCYNANKALMNLGYEALFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKAIE 311 >gi|319440691|ref|ZP_07989847.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium variabile DSM 44702] Length = 335 Score = 38.1 bits (88), Expect = 0.44, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 49/138 (35%), Gaps = 21/138 (15%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RD+++H + + +P E + + E LE Y+ + G L Sbjct: 205 LRDKAVHGYYSGYKYQRGLDAHPERV-AEMEDFTYRFTAELLALENEYSRDLYSLGS--L 261 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVI-----DLKKEKNFFETR 112 + + ++ + A++ +G P ++ P E+I D + +FF Sbjct: 262 DYAGVDAFVHYNADKALMNLGYGPQYEDAAAGVEP-----EIIAALTPDSSETHDFFSGS 316 Query: 113 VTEYQQGAEL-----KWD 125 + Y G WD Sbjct: 317 GSSYVMGRAEVTEEDDWD 334 >gi|323354474|gb|EGA86313.1| Rnr2p [Saccharomyces cerevisiae VL3] Length = 306 Score = 37.7 bits (87), Expect = 0.53, Method: Composition-based stats. Identities = 7/20 (35%), Positives = 11/20 (55%) Query: 2 RDESLHLNFGIDVINQIKIE 21 RDE LH +F + +K + Sbjct: 271 RDEGLHTDFACLLFAHLKNK 290 >gi|48696469|ref|YP_024511.1| putative ribonucleotide reductase minor subunit [Staphylococcus phage K] gi|37729163|gb|AAO47530.1| ORF81 [Staphylococcus phage K] gi|119658118|gb|ABL87153.1| putative ribonucleotide reductase minor subunit [Staphylococcus phage 812] gi|182627942|gb|ACB89104.1| gp ORF111 [Staphylococcus phage A5W] Length = 349 Score = 37.7 bits (87), Expect = 0.54, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 17/129 (13%) Query: 3 DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58 DE+ H + N + E KE + +L E+AY H + Sbjct: 210 DEAYHGSAVGLTAQYDYNLLTEEEKKQADKE----TYELLDILYTNEVAYTHSLY--DPL 263 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKN--FFETRVTE 115 L+ Y+Q+ NR +G E F NP + ++ + +N FF + + Sbjct: 264 ELS-EDVINYVQYNFNRALQNLGREDYFNPEPYNPI--VENQTNVDRLRNVDFFSGK-AD 319 Query: 116 YQQGAELKW 124 Y++ +K Sbjct: 320 YEKSTNIKD 328 >gi|281207436|gb|EFA81619.1| hypothetical protein PPL_05610 [Polysphondylium pallidum PN500] Length = 1292 Score = 37.7 bits (87), Expect = 0.55, Method: Composition-based stats. Identities = 7/54 (12%), Positives = 16/54 (29%), Gaps = 7/54 (12%) Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 57 E H FG + +++ K + +++ +A E Sbjct: 217 EYTHCEFGRLLYSKLI-------NKLDTEMIESIIRDAVDCEKQIMESETGDSI 263 >gi|194246584|ref|YP_002004223.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Phytoplasma mali] gi|193806941|emb|CAP18373.1| Ribonucleoside-diphosphate reductase, beta chain [Candidatus Phytoplasma mali] Length = 348 Score = 37.7 bits (87), Expect = 0.55, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 48/120 (40%), Gaps = 7/120 (5%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + + I L E + +L +IA + ++ Sbjct: 215 IRDESVHGVYIARLALNIYNSFDKLIKDELSKWMYDLLKYFYQEQIALVKSVYNEHYL-- 272 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118 +++++ AN+ +G P F+ E NP + ++ + + + F + YQ+ Sbjct: 273 -INDVNKFVRYNANKALMNLGFNPYFEKEEVNPV--ILNGLNTETKTMDNFSMKGNGYQK 329 >gi|323333040|gb|EGA74442.1| Rnr2p [Saccharomyces cerevisiae AWRI796] Length = 306 Score = 37.7 bits (87), Expect = 0.56, Method: Composition-based stats. Identities = 7/20 (35%), Positives = 11/20 (55%) Query: 2 RDESLHLNFGIDVINQIKIE 21 RDE LH +F + +K + Sbjct: 271 RDEGLHTDFACLLFAHLKNK 290 >gi|82545243|ref|YP_409190.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii Sb227] gi|81246654|gb|ABB67362.1| ribonucleoside-diphosphate reductase 2, beta chain, frag [Shigella boydii Sb227] gi|320186462|gb|EFW61190.1| ribonucleotide-diphosphate reductase subunit beta [Shigella flexneri CDC 796-83] gi|332091953|gb|EGI97031.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella boydii 3594-74] Length = 304 Score = 37.7 bits (87), Expect = 0.59, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 3/88 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E E+ Y+ E + Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYSDELYAETPW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY 88 A + ++ + AN+ +G EPLF Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPA 273 >gi|161502142|ref|YP_001569254.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863489|gb|ABX20112.1| hypothetical protein SARI_00165 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 319 Score = 37.3 bits (86), Expect = 0.73, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 44/130 (33%), Gaps = 14/130 (10%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH--ETMPKGFV 58 +RDE++H + + + +E + + +L E E Y Sbjct: 189 IRDEAVHGYYIGYKYQIALQKQSAIEREELKLFALDLLMELYDNETRYTEALYAETDWV- 247 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRV 113 + ++ + AN+ +G E LF NP +S D +FF Sbjct: 248 ----DDVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENH--DFFSGSG 301 Query: 114 TEYQQGAELK 123 + Y G ++ Sbjct: 302 SSYVMGKAVE 311 >gi|66394974|ref|YP_240948.1| ORF025 [Staphylococcus phage G1] gi|62636996|gb|AAX92107.1| ORF025 [Staphylococcus phage G1] Length = 265 Score = 37.3 bits (86), Expect = 0.79, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 17/129 (13%) Query: 3 DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58 DE+ H + N + E KE + +L E+AY H + Sbjct: 126 DEAYHGSAVGLTAQYDYNLLTEEEKKQADKE----TYELLDILYTNEVAYTHSLY--DPL 179 Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKN--FFETRVTE 115 L+ Y+Q+ NR +G E F NP + ++ + +N FF + + Sbjct: 180 ELS-EDVINYVQYNFNRALQNLGREDYFNPEPYNPI--VENQTNVDRLRNVDFFSGK-AD 235 Query: 116 YQQGAELKW 124 Y++ +K Sbjct: 236 YEKSTNIKD 244 >gi|254993837|ref|ZP_05276027.1| ribonucleotide-diphosphate reductase subunit beta [Listeria monocytogenes FSL J2-064] Length = 48 Score = 36.9 bits (85), Expect = 1.00, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 18/34 (52%), Gaps = 2/34 (5%) Query: 87 KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118 +++N W+ D + + +FFE R + Y++ Sbjct: 5 GHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 38 >gi|238896131|ref|YP_002920867.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella pneumoniae NTUH-K2044] gi|238548449|dbj|BAH64800.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 333 Score = 36.9 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L + E+AY+ E + Sbjct: 203 IRDEAVHGYYIGYKYQKGLEIVSPGKREELKNFALDLLMDLYDNELAYSRELYGESGW-- 260 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 ++ + AN+ +G E LF NP +S D +FF + Sbjct: 261 -FDDVSAFLCYNANKALMNLGYEALFPAEMAAVNPAILAALSPNADENH--DFFSGSGSS 317 Query: 116 YQQG-----AELKWD 125 Y G A+ WD Sbjct: 318 YVIGKMEETADDDWD 332 >gi|330013348|ref|ZP_08307619.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp. MS 92-3] gi|328533536|gb|EGF60259.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp. MS 92-3] Length = 320 Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 50/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L + E+AY+ E + Sbjct: 190 IRDEAVHGYYIGYKYQKGLEIVSPGKREELKNFALDLLMDLYDNELAYSRELYGESGW-- 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115 ++ + AN+ +G E LF NP + + ++N FF + Sbjct: 248 -FDDVSAFLCYNANKALMNLGYEALFPAEMAAVNPA--ILAALSPNADENHDFFSGSGSS 304 Query: 116 YQQG-----AELKWD 125 Y G A+ WD Sbjct: 305 YVIGKMEETADDDWD 319 >gi|295097265|emb|CBK86355.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 319 Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 50/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L + E++Y E Sbjct: 189 IRDEAVHGYYIGYKYQKGLEKVSAEKREELKGFALDLLMDLYDNELSYTEELYAGTGW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115 + ++ + AN+ +G E LF NP + + ++N FF + Sbjct: 247 -EEDVKAFLCYNANKALMNLGYEALFPPEMAEVNPA--ILAALSPNADENHDFFSGSGSS 303 Query: 116 YQQGAELK-----WD 125 Y G ++ WD Sbjct: 304 YVMGKAVETQDEDWD 318 >gi|288933942|ref|YP_003438001.1| ribonucleoside-diphosphate reductase [Klebsiella variicola At-22] gi|290510980|ref|ZP_06550349.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp. 1_1_55] gi|288888671|gb|ADC56989.1| Ribonucleoside-diphosphate reductase [Klebsiella variicola At-22] gi|289775973|gb|EFD83972.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp. 1_1_55] Length = 320 Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 50/135 (37%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L + E+AY+ E + Sbjct: 190 IRDEAVHGYYIGYKYQKGLEIVSPGKREELKNFALDLLMDLYDNELAYSRELYGESGW-- 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115 ++ + AN+ +G E LF NP + + ++N FF + Sbjct: 248 -FDDVSAFLCYNANKALMNLGYEALFPAEMAAVNPA--ILAALSPNADENHDFFSGSGSS 304 Query: 116 YQQG-----AELKWD 125 Y G A+ WD Sbjct: 305 YVIGKTEETADDDWD 319 >gi|197294249|ref|YP_001798790.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Phytoplasma australiense] gi|171853576|emb|CAM11447.1| Ribonucleotide reductase, beta subunit [Candidatus Phytoplasma australiense] Length = 344 Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 4/119 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + + ++ KE + + ++ E K + Sbjct: 216 IRDESIHGVYIGRLATELYHLFDDDTKKELKTWLDATMKTLYKEQMELVKEVYSK--LSY 273 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118 ++++++ AN+ +G + F EN P + ++ + + + F + YQ+ Sbjct: 274 LEEDVQKFVRYNANKALMNLGFDAFFP-EENVNPVVLNGLNTETKTMDNFSMKGNGYQK 331 >gi|16766119|ref|NP_461734.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167992529|ref|ZP_02573627.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168233769|ref|ZP_02658827.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194469894|ref|ZP_03075878.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197251114|ref|YP_002147708.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|204929699|ref|ZP_03220773.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|238909579|ref|ZP_04653416.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|585861|sp|P17424|RIR4_SALTY RecName: Full=Ribonucleoside-diphosphate reductase 2 subunit beta; AltName: Full=R2F protein; AltName: Full=Ribonucleotide reductase 2 gi|4389108|pdb|2R2F|A Chain A, Ribonucleotide Reductase R2f Protein From Salmonella Typhimurium (Oxidized) gi|4389109|pdb|2R2F|B Chain B, Ribonucleotide Reductase R2f Protein From Salmonella Typhimurium (Oxidized) gi|4389155|pdb|1R2F|A Chain A, Ribonucleotide Reductase R2f Protein From Salmonella Typhimurium gi|4389156|pdb|1R2F|B Chain B, Ribonucleotide Reductase R2f Protein From Salmonella Typhimurium gi|109157246|pdb|2BQ1|I Chain I, Ribonucleotide Reductase Class 1b Holocomplex R1e,R2f From Salmonella Typhimurium gi|109157247|pdb|2BQ1|J Chain J, Ribonucleotide Reductase Class 1b Holocomplex R1e,R2f From Salmonella Typhimurium gi|311979|emb|CAA51695.1| ribonucleoside-diphosphate reductase [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16421357|gb|AAL21693.1| ribonucleoside-diphosphate reductase 2, beta subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194456258|gb|EDX45097.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197214817|gb|ACH52214.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|204321418|gb|EDZ06618.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205329263|gb|EDZ16027.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205332191|gb|EDZ18955.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|261247949|emb|CBG25782.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994924|gb|ACY89809.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159373|emb|CBW18891.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913831|dbj|BAJ37805.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321223605|gb|EFX48670.1| Ribonucleotide reductase of class Ib aerobic, beta subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323131164|gb|ADX18594.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332989685|gb|AEF08668.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 319 Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E EI Y E + + Sbjct: 189 IRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEIRY-TEALYAETGWV 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 N + ++ + AN+ +G E LF NP +S D +FF + Sbjct: 248 N--DVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKTVE 311 >gi|307104534|gb|EFN52787.1| hypothetical protein CHLNCDRAFT_10712 [Chlorella variabilis] Length = 214 Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 6/20 (30%), Positives = 10/20 (50%) Query: 2 RDESLHLNFGIDVINQIKIE 21 RDE LH +F + ++ Sbjct: 195 RDEGLHTDFACHLYELLQNR 214 >gi|168238723|ref|ZP_02663781.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194737146|ref|YP_002115764.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194712648|gb|ACF91869.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288484|gb|EDY27861.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 319 Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E EI Y E + + Sbjct: 189 IRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEIRY-TEALYAETGWV 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 N + ++ + AN+ +G E LF NP +S D +FF + Sbjct: 248 N--DVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKTVE 311 >gi|152971534|ref|YP_001336643.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150956383|gb|ABR78413.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 320 Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L + E+AY+ E + Sbjct: 190 IRDEAVHGYYIGYKYQKGLEIVSPGKREELKNFALDLLMDLYDNELAYSRELYGESGW-- 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 ++ + AN+ +G E LF NP +S D +FF + Sbjct: 248 -FDDVSAFLCYNANKALMNLGYEALFPAEMAAVNPAILAALSPNADENH--DFFSGSGSS 304 Query: 116 YQQG-----AELKWD 125 Y G A+ WD Sbjct: 305 YVIGKMEETADDDWD 319 >gi|322614368|gb|EFY11299.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621567|gb|EFY18420.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624428|gb|EFY21261.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626626|gb|EFY23431.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633514|gb|EFY30256.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638443|gb|EFY35141.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639746|gb|EFY36430.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322643792|gb|EFY40342.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649478|gb|EFY45912.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655932|gb|EFY52232.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661327|gb|EFY57552.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662525|gb|EFY58733.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666899|gb|EFY63074.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671269|gb|EFY67392.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677724|gb|EFY73787.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681449|gb|EFY77479.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322683848|gb|EFY79858.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323193763|gb|EFZ78966.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197449|gb|EFZ82586.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203264|gb|EFZ88293.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205210|gb|EFZ90185.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212777|gb|EFZ97588.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218081|gb|EGA02793.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221656|gb|EGA06069.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225124|gb|EGA09375.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230844|gb|EGA14962.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234805|gb|EGA18891.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238844|gb|EGA22894.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241544|gb|EGA25575.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248309|gb|EGA32245.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252925|gb|EGA36759.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256953|gb|EGA40662.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260572|gb|EGA44183.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264370|gb|EGA47876.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269504|gb|EGA52957.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 319 Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E EI Y E + + Sbjct: 189 IRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEICY-TEALYAETDWV 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 N + ++ + AN+ +G E LF NP +S D +FF + Sbjct: 248 N--DVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKTVE 311 >gi|262043918|ref|ZP_06017006.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259038772|gb|EEW39955.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 320 Score = 36.6 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L + E+AY+ E + Sbjct: 190 IRDEAVHGYYIGYKYQKGLEIVSPGKREELKNFALDLLMDLYDNELAYSRELYGESGW-- 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 ++ + AN+ +G E LF NP +S D +FF + Sbjct: 248 -FDDVSAFLCYNANKALMNLGYEALFPAEMAAVNPAILAALSPNADENH--DFFSGSGSS 304 Query: 116 YQQG-----AELKWD 125 Y G A+ WD Sbjct: 305 YVIGKMEETADDDWD 319 >gi|261342124|ref|ZP_05969982.1| ribonucleoside-diphosphate reductase, beta subunit [Enterobacter cancerogenus ATCC 35316] gi|288315455|gb|EFC54393.1| ribonucleoside-diphosphate reductase, beta subunit [Enterobacter cancerogenus ATCC 35316] Length = 319 Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 47/135 (34%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L + E++Y Sbjct: 189 IRDEAVHGYYIGYKYQKGLEIVSEARREELKGFALDLLMDLYDNELSYTEALYAGSGW-- 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 + ++ + AN+ +G E LF NP +S D +FF + Sbjct: 247 -EDEVKAFLCYNANKALMNLGYEALFPPDMADVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK-----WD 125 Y G ++ WD Sbjct: 304 YVMGKAVETEDEDWD 318 >gi|259907588|ref|YP_002647944.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia pyrifoliae Ep1/96] gi|224963210|emb|CAX54694.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia pyrifoliae Ep1/96] gi|283477430|emb|CAY73346.1| ribonucleoside-diphosphate reductase 2 beta chain [Erwinia pyrifoliae DSM 12163] Length = 319 Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 ++DE++H + + + L +E QQ + +L E E+AY E + G G Sbjct: 189 IKDEAVHGYYIGYKYQKALEKETPLRKEELQQFAIELLLELYENELAY-TEALYAGV-GW 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN--FFETRVTE 115 ++++ + AN+ +G E LF NP + + ++N FF + Sbjct: 247 -QEDVKKFLHYNANKALMNLGYEALFPADMTDVNPA--ILAALSPNADENHDFFSGSGSS 303 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 304 YVMGKAVDTQDEDWD 318 >gi|168262084|ref|ZP_02684057.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205349275|gb|EDZ35906.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 319 Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + KE + + +L E EI Y E + + Sbjct: 189 IRDEAVHGYYIGYKYQIALQKLSAIERKELKLFALDLLMELYDNEICY-TEALYAETGWV 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115 N + ++ + AN+ +G E LF NP + + ++N FF + Sbjct: 248 N--DVKAFLCYNANKALMNLGYEALFPPEMADVNPA--ILAALSPNADENHDFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKTVE 311 >gi|328700623|ref|XP_003241331.1| PREDICTED: hypothetical protein LOC100573065 [Acyrthosiphon pisum] Length = 50 Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 12/19 (63%) Query: 103 KKEKNFFETRVTEYQQGAE 121 + E NFFE RV YQ+ + Sbjct: 14 RGETNFFEKRVCYYQKASV 32 >gi|329575047|gb|EGG56599.1| hypothetical protein HMPREF9520_01787 [Enterococcus faecalis TX1467] Length = 116 Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 7/85 (8%) Query: 28 KEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK 87 + + +L+E E Y E +G + ++++ AN+ +G++PLF Sbjct: 9 DKLKDWMYNLLYELYENEERYTEELYDD--LGWT-EEVKTFLRYNANKALMNLGMDPLFA 65 Query: 88 YTE---NPFPWMSEVIDLKKEKNFF 109 T NP M+ + +FF Sbjct: 66 DTANDVNPIV-MNGISTGTSNHDFF 89 >gi|206577235|ref|YP_002236984.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella pneumoniae 342] gi|206566293|gb|ACI08069.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella pneumoniae 342] Length = 320 Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 10/124 (8%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + +E + + +L + E+AY+ E + Sbjct: 190 IRDEAVHGYYIGYKYQKGLEIVSPGKREELKNFALDLLMDLYDNELAYSRELYGESGW-- 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 ++ + AN+ +G E LF NP +S D +FF + Sbjct: 248 -FDDVSAFLCYNANKALMNLGYEALFPAEMAAVNPAILAALSPNADENH--DFFSGSGSS 304 Query: 116 YQQG 119 Y G Sbjct: 305 YVIG 308 >gi|260174332|ref|ZP_05760744.1| hypothetical protein BacD2_20921 [Bacteroides sp. D2] Length = 153 Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 4/64 (6%) Query: 28 KEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIA-NRRCHQIGLEPLF 86 K F+ + + E ++ + P G + Y +F+A NRR +IG+E + Sbjct: 88 KLFKTCNVRVCSEEKQVDYCFQCSHFPCENTGFDEHL---YKRFVAINRRMQEIGIEKYY 144 Query: 87 KYTE 90 + + Sbjct: 145 EEVK 148 >gi|310764903|gb|ADP09853.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia sp. Ejp617] Length = 319 Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 ++DE++H + + + L +E QQ + +L E E+AY E + G G Sbjct: 189 IKDEAVHGYYIGYKYQKALEKETPLRKEELQQFAIELLLELYENELAY-TEALYAGV-GW 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115 ++++ + AN+ +G E LF NP +S D +FF + Sbjct: 247 -QKDVKKFLHYNANKALMNLGYEALFPADMTDVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 304 YVMGKAVDTQDEDWD 318 >gi|315922600|ref|ZP_07918840.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313696475|gb|EFS33310.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 150 Score = 35.8 bits (82), Expect = 2.3, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 4/64 (6%) Query: 28 KEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIA-NRRCHQIGLEPLF 86 K F+ + + E ++ + P G + Y +F+A NRR +IG+E + Sbjct: 85 KLFKTCNVRVCSEEKQVDYCFQCSHFPCENTGFDEHL---YKRFVAINRRMQEIGIEKYY 141 Query: 87 KYTE 90 + + Sbjct: 142 EEVK 145 >gi|224584592|ref|YP_002638390.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224469119|gb|ACN46949.1| ribonucleotide-diphosphate reductase beta subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 319 Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E EI Y E + + Sbjct: 189 IRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEICY-TEALYAETGWV 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 N + ++ + AN+ +G E LF NP +S D +FF + Sbjct: 248 N--DVKAFLCYNANKALMNLGYEALFPPEIADVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKTVE 311 >gi|20804010|emb|CAD31587.1| PUTATIVE METHYLASPARTATE AMMONIA-LYASE PROTEIN [Mesorhizobium loti R7A] Length = 423 Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 34/86 (39%), Gaps = 22/86 (25%) Query: 34 SRTMLHEATLLEIAYAHETMPKGFV------GLNAPSCEQYMQFIANRRCHQIGLEPLFK 87 M+ +A + +P G + G+N + ++++++A RR +IG Sbjct: 186 VDKMILKAV--------DVLPHGLINSRQKFGINGQTFMEFVKWVA-RRTREIGCPGYHP 236 Query: 88 YTENPFP---WMSEVIDL--KKEKNF 108 F W+ + I L + +F Sbjct: 237 VLH--FDVYGWIGQEIGLEPQNIADF 260 >gi|254477923|ref|ZP_05091308.1| oligopeptide/dipeptide ABC transporter, permease protein [Ruegeria sp. R11] gi|214028508|gb|EEB69344.1| oligopeptide/dipeptide ABC transporter, permease protein [Ruegeria sp. R11] Length = 326 Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 11/78 (14%) Query: 10 FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYM 69 F I +I +N ++ + E ++ + +GLN QY+ Sbjct: 17 FAISLIGFAIQDN---LGDPLRELVGQSVSEEVRQQL--------RDELGLNDSFMTQYI 65 Query: 70 QFIANRRCHQIGLEPLFK 87 +F+ N +G FK Sbjct: 66 RFLGNVLQGDLGTSYFFK 83 >gi|198241755|ref|YP_002216784.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197936271|gb|ACH73604.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326624542|gb|EGE30887.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 319 Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E EI Y E + + Sbjct: 189 IRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEICY-TEALYAETGWV 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 N + ++ + AN+ +G E LF NP +S D +FF + Sbjct: 248 N--DVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKTVE 311 >gi|62181312|ref|YP_217729.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161615703|ref|YP_001589668.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167552693|ref|ZP_02346445.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168822877|ref|ZP_02834877.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|197265553|ref|ZP_03165627.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205353758|ref|YP_002227559.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858077|ref|YP_002244728.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|62128945|gb|AAX66648.1| ribonucleoside-diphosphate reductase 2, beta subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161365067|gb|ABX68835.1| hypothetical protein SPAB_03488 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|197243808|gb|EDY26428.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205273539|emb|CAR38525.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205322691|gb|EDZ10530.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205340791|gb|EDZ27555.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|206709880|emb|CAR34233.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|320087214|emb|CBY96980.1| ribonucleoside-diphosphate reductase beta chain [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322715798|gb|EFZ07369.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|326628866|gb|EGE35209.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 319 Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E EI Y E + + Sbjct: 189 IRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEICY-TEALYAETGWV 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 N + ++ + AN+ +G E LF NP +S D +FF + Sbjct: 248 N--DVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKTVE 311 >gi|26553540|ref|NP_757474.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma penetrans HF-2] gi|26453546|dbj|BAC43878.1| ribonucleotide diphosphate reductase subunit beta [Mycoplasma penetrans HF-2] Length = 339 Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 46/129 (35%), Gaps = 8/129 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RD+ +H + + + P E ++ +L++ LE + +E G Sbjct: 209 LRDKVIHNYYSGYKYQKKVAKLPPEKQAEMKKFVFDLLYQVIDLEKEFLNELY----AGF 264 Query: 61 N-APSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEY 116 N A ++ + A + +G + F E ++ + +FF + Y Sbjct: 265 NIADQAIKFSVYNAGKFLQNLGYDSPFTPEETEIKPEIFVQLSARADENHDFFSGSGSSY 324 Query: 117 QQGAELKWD 125 G + D Sbjct: 325 IMGNVEETD 333 >gi|200386806|ref|ZP_03213418.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199603904|gb|EDZ02449.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 319 Score = 35.4 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E EI Y E + + Sbjct: 189 IRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEICY-TEALYAETGWV 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 N + ++ + AN+ +G E LF NP +S D +FF + Sbjct: 248 N--DVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKTVE 311 >gi|168244605|ref|ZP_02669537.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168464072|ref|ZP_02697989.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194442875|ref|YP_002042053.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450827|ref|YP_002046771.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194401538|gb|ACF61760.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194409131|gb|ACF69350.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|195633109|gb|EDX51523.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205336532|gb|EDZ23296.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 319 Score = 35.4 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + + +E + + +L E EI Y E + + Sbjct: 189 IRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALNLLMELYDNEIRY-TEALYAETGWV 247 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115 N + ++ + AN+ +G E LF NP +S D +FF + Sbjct: 248 N--DVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENH--DFFSGSGSS 303 Query: 116 YQQGAELK 123 Y G ++ Sbjct: 304 YVMGKTVE 311 >gi|284009251|emb|CBA76360.1| ribonucleoside-diphosphate reductase beta chain [Arsenophonus nasoniae] Length = 321 Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 47/125 (37%), Gaps = 18/125 (14%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDE++H + + I+ E + + +L EI Y+ VG Sbjct: 191 IRDEAIHGYYIGYKFQKSLIKYSDKEKDEIKDFAYLLLLNLYENEIKYSESLY--DEVGW 248 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI---------DLKKEKNFFET 111 ++++ + AN+ +G E LF T M++V + + +FF Sbjct: 249 T-EDVKKFLHYNANKALMNLGYESLFPET------MTDVSPAILSALSPNANENHDFFSG 301 Query: 112 RVTEY 116 + Y Sbjct: 302 SGSSY 306 >gi|312865062|ref|ZP_07725290.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus downei F0415] gi|311099173|gb|EFQ57389.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus downei F0415] Length = 318 Score = 35.0 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 6/92 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA-HETMPKGFVG 59 +R+ESLH + + + E K+F+ +R + + E + Sbjct: 191 IRNESLHCYYLGHKVKLLLTEVDQDEAKDFENWARDFVDKLVQQEEDLIEDYFLLDDAKS 250 Query: 60 LNAPSCEQYMQFIANRRCHQIGL-EPLFKYTE 90 L Q AN GL + ++ + + Sbjct: 251 LAKDLLHQ----EANHILENFGLGQSVYPFVQ 278 >gi|156340310|ref|XP_001620415.1| hypothetical protein NEMVEDRAFT_v1g148226 [Nematostella vectensis] gi|156205304|gb|EDO28315.1| predicted protein [Nematostella vectensis] Length = 224 Score = 35.0 bits (80), Expect = 3.7, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 16/33 (48%), Gaps = 6/33 (18%) Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKS 34 RDE +H +F + + N HL K +++ Sbjct: 198 RDEGVHCDFAVHIHNH------HLINKVPKERI 224 >gi|3695371|gb|AAC62775.1| DNA gyrase subunit B [Campylobacter jejuni] Length = 685 Score = 35.0 bits (80), Expect = 3.8, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%) Query: 8 LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63 L F +N++ + +++ + + + E A + + G GLN Sbjct: 477 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 533 Query: 64 -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107 + Y++ +A R LE F +M E +L K N Sbjct: 534 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 581 >gi|320539491|ref|ZP_08039160.1| putative truncated ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein [Serratia symbiotica str. Tucson] gi|320030616|gb|EFW12626.1| putative truncated ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein [Serratia symbiotica str. Tucson] Length = 309 Score = 34.6 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 3/87 (3%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +R E++H + + + ++ + + +LH+ E+ Y + VG Sbjct: 193 IRYEAVHGYYIGYKFQKGLERVDVIRRQQVKNVAFDLLHDLYDNEVCYTQDLY--DGVGW 250 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK 87 + ++ + AN+ +G E LF Sbjct: 251 T-EDVKTFLHYNANKALMNLGYEALFP 276 >gi|149194971|ref|ZP_01872064.1| glutamyl-tRNA synthetase [Caminibacter mediatlanticus TB-2] gi|149134892|gb|EDM23375.1| glutamyl-tRNA synthetase [Caminibacter mediatlanticus TB-2] Length = 461 Score = 34.6 bits (79), Expect = 4.1, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 23/112 (20%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RD +FGID+IN K E + E +++ +T+ A +E + Sbjct: 320 LRD-----DFGIDIINHDKKE---ILIDELKERVKTLKEMAEEIEK------ILTPPTSY 365 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENP-FP--W---MSEVIDLKKEK 106 N + Y +FI + + F ++P P W M E + LK K Sbjct: 366 NE---KAYKKFIKDEVIENLKEFVKFLEDKDPKLPNEWHDVMDEFLKLKNIK 414 >gi|307746967|gb|ADN90237.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni M1] gi|315931303|gb|EFV10272.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 327] Length = 769 Score = 34.6 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%) Query: 8 LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63 L F +N++ + +++ + + + E A + + G GLN Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562 Query: 64 -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107 + Y++ +A R LE F +M E +L K N Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610 >gi|205355744|ref|ZP_03222514.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni CG8421] gi|205346521|gb|EDZ33154.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni CG8421] Length = 769 Score = 34.6 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%) Query: 8 LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63 L F +N++ + +++ + + + E A + + G GLN Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562 Query: 64 -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107 + Y++ +A R LE F +M E +L K N Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610 >gi|148926822|ref|ZP_01810501.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni CG8486] gi|145844547|gb|EDK21654.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni CG8486] Length = 769 Score = 34.6 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%) Query: 8 LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63 L F +N++ + +++ + + + E A + + G GLN Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562 Query: 64 -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107 + Y++ +A R LE F +M E +L K N Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610 >gi|153951349|ref|YP_001397276.1| DNA gyrase subunit B [Campylobacter jejuni subsp. doylei 269.97] gi|152938795|gb|ABS43536.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. doylei 269.97] Length = 769 Score = 34.6 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%) Query: 8 LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63 L F +N++ + +++ + + + E A + + G GLN Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562 Query: 64 -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107 + Y++ +A R LE F +M E +L K N Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610 >gi|86153959|ref|ZP_01072161.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni HB93-13] gi|85842497|gb|EAQ59710.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni HB93-13] Length = 769 Score = 34.6 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%) Query: 8 LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63 L F +N++ + +++ + + + E A + + G GLN Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562 Query: 64 -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107 + Y++ +A R LE F +M E +L K N Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610 >gi|88597733|ref|ZP_01100966.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|218561696|ref|YP_002343475.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|9297098|sp|O87667|GYRB_CAMJE RecName: Full=DNA gyrase subunit B gi|88190037|gb|EAQ94013.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|112359402|emb|CAL34184.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284925306|gb|ADC27658.1| DNA gyrase B subunit [Campylobacter jejuni subsp. jejuni IA3902] gi|315928458|gb|EFV07770.1| DNA gyrase B subunit [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930330|gb|EFV09418.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 305] Length = 769 Score = 34.6 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%) Query: 8 LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63 L F +N++ + +++ + + + E A + + G GLN Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562 Query: 64 -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107 + Y++ +A R LE F +M E +L K N Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610 >gi|57236917|ref|YP_178032.1| DNA gyrase subunit B [Campylobacter jejuni RM1221] gi|57165721|gb|AAW34500.1| DNA gyrase, B subunit [Campylobacter jejuni RM1221] Length = 769 Score = 34.6 bits (79), Expect = 4.3, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%) Query: 8 LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63 L F +N++ + +++ + + + E A + + G GLN Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562 Query: 64 -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107 + Y++ +A R LE F +M E +L K N Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610 >gi|86150547|ref|ZP_01068771.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni CF93-6] gi|86152360|ref|ZP_01070570.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|121612557|ref|YP_999722.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 81-176] gi|167004699|ref|ZP_02270457.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 81-176] gi|315123619|ref|YP_004065623.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85838999|gb|EAQ56264.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni CF93-6] gi|85840657|gb|EAQ57909.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|87249029|gb|EAQ71991.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|315017341|gb|ADT65434.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 769 Score = 34.6 bits (79), Expect = 4.3, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%) Query: 8 LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63 L F +N++ + +++ + + + E A + + G GLN Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562 Query: 64 -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107 + Y++ +A R LE F +M E +L K N Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610 >gi|48094245|gb|AAT40430.1| DNA gyrase subunit B [Campylobacter jejuni] gi|315057444|gb|ADT71773.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni S3] Length = 769 Score = 34.6 bits (79), Expect = 4.3, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%) Query: 8 LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63 L F +N++ + +++ + + + E A + + G GLN Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562 Query: 64 -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107 + Y++ +A R LE F +M E +L K N Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610 >gi|85057306|ref|YP_456222.1| ribonucleotide-diphosphate reductase subunit beta [Aster yellows witches'-broom phytoplasma AYWB] gi|84789411|gb|ABC65143.1| ribonucleoside-diphosphate reductase beta chain [Aster yellows witches'-broom phytoplasma AYWB] Length = 350 Score = 34.6 bits (79), Expect = 4.5, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 51/120 (42%), Gaps = 7/120 (5%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + ++ E L+ K +Q +T L + + + L Sbjct: 223 IRDESIHGV----YVGRLATELYQLFDKPTKQTLKTWLDDLMQQLYQTKTSLVNAIYHKL 278 Query: 61 N-APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118 N +++++ AN+ +G + F +EN P + ++ + + + F + YQ+ Sbjct: 279 NLEDDVNKFVRYNANKALMNLGFDAFFP-SENVNPVIINGLNTETKTMDNFSMKGNGYQK 337 >gi|157414325|ref|YP_001481581.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 81116] gi|157385289|gb|ABV51604.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 81116] Length = 769 Score = 34.6 bits (79), Expect = 4.5, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%) Query: 8 LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63 L F +N++ + +++ + + + E A + + G GLN Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562 Query: 64 -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107 + Y++ +A R LE F +M E +L K N Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKANN 610 >gi|292489180|ref|YP_003532067.1| ribonucleoside-diphosphate reductase 2 subunit beta [Erwinia amylovora CFBP1430] gi|292900297|ref|YP_003539666.1| ribonucleoside-diphosphate reductase 2 subunit beta [Erwinia amylovora ATCC 49946] gi|291200145|emb|CBJ47271.1| ribonucleoside-diphosphate reductase 2 beta chain [Erwinia amylovora ATCC 49946] gi|291554614|emb|CBA22274.1| ribonucleoside-diphosphate reductase 2 beta chain [Erwinia amylovora CFBP1430] Length = 319 Score = 34.6 bits (79), Expect = 4.6, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 54/135 (40%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 ++DE++H + + + +E QQ + +L E E+AY + + G G Sbjct: 189 IKDEAVHGYYIGYKYQKALEKETPQRKEELQQFAIELLLELYENELAY-TDALYSGV-GW 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN--FFETRVTE 115 ++++ + AN+ +G E LF NP + + ++N FF + Sbjct: 247 -QEDVKKFLHYNANKALMNLGYEALFPAEMTDVNPA--ILAALSPNADENHDFFSGSGSS 303 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 304 YVMGKAVDTEDEDWD 318 >gi|312173339|emb|CBX81594.1| ribonucleoside-diphosphate reductase 2 beta chain [Erwinia amylovora ATCC BAA-2158] Length = 319 Score = 34.6 bits (79), Expect = 4.7, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 54/135 (40%), Gaps = 15/135 (11%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 ++DE++H + + + +E QQ + +L E E+AY + + G G Sbjct: 189 IKDEAVHGYYIGYKYQKALEKETPQRKEELQQFAIELLLELYENELAY-TDALYSGV-GW 246 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN--FFETRVTE 115 ++++ + AN+ +G E LF NP + + ++N FF + Sbjct: 247 -QEDVKKFLHYNANKALMNLGYEALFPAEMTDVNPA--ILAALSPNADENHDFFSGSGSS 303 Query: 116 YQQGAEL-----KWD 125 Y G + WD Sbjct: 304 YVMGKAVDTEDEDWD 318 >gi|283956181|ref|ZP_06373666.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 1336] gi|283792335|gb|EFC31119.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 1336] Length = 769 Score = 34.6 bits (79), Expect = 4.8, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%) Query: 8 LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63 L F +N++ + +++ + + + E A + + G GLN Sbjct: 506 LTFFFRFMNELVTNGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562 Query: 64 -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107 + Y++ +A R LE F +M E +L K N Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610 >gi|115927347|ref|XP_001199693.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115964649|ref|XP_001179170.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 243 Score = 34.6 bits (79), Expect = 4.9, Method: Composition-based stats. Identities = 11/66 (16%), Positives = 25/66 (37%), Gaps = 13/66 (19%) Query: 5 SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPS 64 SLHL+ + + ++ + ++ + EA +E G G++ Sbjct: 142 SLHLDAACGLFTEELMDEGGKCDPDVIEEV---MDEADEIE----------GLGGIDGEK 188 Query: 65 CEQYMQ 70 E Y++ Sbjct: 189 IEDYLE 194 >gi|258508120|ref|YP_003170871.1| phage-related terminase large subunit [Lactobacillus rhamnosus GG] gi|257148047|emb|CAR87020.1| Phage-related terminase, large subunit [Lactobacillus rhamnosus GG] Length = 453 Score = 34.6 bits (79), Expect = 5.2, Method: Composition-based stats. Identities = 8/25 (32%), Positives = 17/25 (68%), Gaps = 1/25 (4%) Query: 86 FKYTENPFPWMSEVID-LKKEKNFF 109 + +NP+ W++E ID ++ + +FF Sbjct: 173 YNPPKNPYDWINEWIDSVRGDPDFF 197 >gi|259649436|dbj|BAI41598.1| phage terminase large subunit [Lactobacillus rhamnosus GG] Length = 446 Score = 34.2 bits (78), Expect = 5.3, Method: Composition-based stats. Identities = 8/25 (32%), Positives = 17/25 (68%), Gaps = 1/25 (4%) Query: 86 FKYTENPFPWMSEVID-LKKEKNFF 109 + +NP+ W++E ID ++ + +FF Sbjct: 166 YNPPKNPYDWINEWIDSVRGDPDFF 190 >gi|229542954|ref|ZP_04432014.1| Na+/H+ antiporter [Bacillus coagulans 36D1] gi|229327374|gb|EEN93049.1| Na+/H+ antiporter [Bacillus coagulans 36D1] Length = 679 Score = 34.2 bits (78), Expect = 6.0, Method: Composition-based stats. Identities = 10/64 (15%), Positives = 28/64 (43%), Gaps = 2/64 (3%) Query: 9 NFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQY 68 + ++++Q+K E + + EF++ +A E Y + M + + + Sbjct: 459 DNYQNMLHQLKAEESEIDSLEFKRIETETRMKALEAETEYINALMKSKRI--DQEMAFLF 516 Query: 69 MQFI 72 +++I Sbjct: 517 LEYI 520 >gi|241895721|ref|ZP_04783017.1| ribonucleotide-diphosphate reductase subunit beta [Weissella paramesenteroides ATCC 33313] gi|241871088|gb|EER74839.1| ribonucleotide-diphosphate reductase subunit beta [Weissella paramesenteroides ATCC 33313] Length = 318 Score = 34.2 bits (78), Expect = 6.3, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 40/112 (35%), Gaps = 7/112 (6%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 +RDES+H + E E + +L + E Y +G Sbjct: 188 LRDESVHGTYIGYKFQLGFNELSTDEQNELKTWLYDLLLDLYGNEEKYTKLLY--DEIGW 245 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFF 109 S ++++ AN+ +G +PLF NP M+ + +FF Sbjct: 246 T-ESVLTFLRYNANKALMNLGQDPLFPDGAEDVNPIV-MNGISTTTSNHDFF 295 >gi|157310978|ref|YP_001468974.1| putative ribonucleotide reductase [Corynebacterium phage P1201] gi|95832126|gb|ABF57526.1| putative ribonucleotide reductase [Corynebacterium phage P1201] Length = 237 Score = 34.2 bits (78), Expect = 6.6, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 48/128 (37%), Gaps = 18/128 (14%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60 MRDE +H + ++ +++ + + EI E +GL Sbjct: 108 MRDEGVHGYYLGYKFQKVMEGALPYERDAVKERVTNLACRLFVNEIPLIEEIY--EPLGL 165 Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEV---------IDLKKEKNFFET 111 +A + ++++ N+ +GLE +F M+ V +D ++ +FF Sbjct: 166 SAQ-VQTFLRYNLNKAMQNLGLENVFPAE------MTRVEPRILSQLSVDSEETHDFFSG 218 Query: 112 RVTEYQQG 119 + Y G Sbjct: 219 SGSSYVIG 226 >gi|223040875|ref|ZP_03611139.1| conserved hypothetical protein [Campylobacter rectus RM3267] gi|222877837|gb|EEF12954.1| conserved hypothetical protein [Campylobacter rectus RM3267] Length = 743 Score = 34.2 bits (78), Expect = 6.8, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 35/87 (40%), Gaps = 8/87 (9%) Query: 12 IDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQF 71 ++++ + + ++ Q+ + + EA E + +GL+A + ++ Sbjct: 481 VNLVKDYASVSKFILSRAEQENVKNIFKEAVKDEEIFKIYA----QLGLSAELVKSELEK 536 Query: 72 IANRRCHQIGLEPL--FKYTENPFPWM 96 IAN IG + F +N ++ Sbjct: 537 IAN--AKIIGASEILEFDAAKNLTRFL 561 >gi|269865568|ref|XP_002651969.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] gi|220063399|gb|EED42087.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon bieneusi H348] Length = 251 Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats. Identities = 7/20 (35%), Positives = 10/20 (50%) Query: 2 RDESLHLNFGIDVINQIKIE 21 RDE LH +F + I + Sbjct: 219 RDEGLHTDFACLLHKYINNK 238 >gi|283953662|ref|ZP_06371193.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 414] gi|283794703|gb|EFC33441.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 414] Length = 769 Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 25/68 (36%), Gaps = 6/68 (8%) Query: 45 EIAYAHETMPKGFVGLNAP-----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEV 99 E A + + G GLN + Y++ +A R LE F +M E Sbjct: 544 EKALSEYLIETGIEGLNYEGIGMNDLKDYLKIVAAYRVILKDLEKRFNVIS-VIRYMIEN 602 Query: 100 IDLKKEKN 107 +L K N Sbjct: 603 SNLVKGNN 610 >gi|115927349|ref|XP_001199705.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115964647|ref|XP_001179103.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 135 Score = 33.9 bits (77), Expect = 7.5, Method: Composition-based stats. Identities = 11/66 (16%), Positives = 25/66 (37%), Gaps = 13/66 (19%) Query: 5 SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPS 64 SLHL+ + + ++ + ++ + EA +E G G++ Sbjct: 34 SLHLDAACGLFMEELMDEGGKCDPDVIEEV---MDEADEIE----------GLGGIDGEK 80 Query: 65 CEQYMQ 70 E Y++ Sbjct: 81 IEDYLE 86 >gi|39938541|ref|NP_950307.1| ribonucleotide-diphosphate reductase subunit beta [Onion yellows phytoplasma OY-M] gi|39721650|dbj|BAD04140.1| ribonucleotide reductase beta subunit [Onion yellows phytoplasma OY-M] Length = 350 Score = 33.9 bits (77), Expect = 7.7, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 9/121 (7%) Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59 +RDES+H + ++ E L+ K QQ +T L + A ++ Sbjct: 223 IRDESIHGV----YVGRLATEIYQLFDKPTQQTLKTWLDDLMQQLYQ-AQTSLVHAIYHK 277 Query: 60 LN-APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117 LN +++++ AN+ +G + F +EN P + ++ + + + F + YQ Sbjct: 278 LNLEDDVNKFVRYNANKALMNLGFDAFFP-SENVNPVIINGLNTETKTMDNFSMKGNGYQ 336 Query: 118 Q 118 + Sbjct: 337 K 337 >gi|268320098|ref|YP_003293754.1| ribonucleoside-diphosphate reductase beta chain [Lactobacillus johnsonii FI9785] gi|262398473|emb|CAX67487.1| ribonucleoside-diphosphate reductase beta chain [Lactobacillus johnsonii FI9785] Length = 313 Score = 33.9 bits (77), Expect = 8.4, Method: Composition-based stats. Identities = 14/102 (13%), Positives = 31/102 (30%), Gaps = 10/102 (9%) Query: 10 FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYM 69 F D K E + + E+++ + E Y+ Sbjct: 204 FRRDFFKLSKKEQNKVH-----DWVYDLCDNLYDNELSHIKLLYQNTDL---EDKVEHYI 255 Query: 70 QFIANRRCHQIGLEPLFKYTENPFPWM--SEVIDLKKEKNFF 109 + N+ +G EP + + + +++ K+FF Sbjct: 256 HYTLNKALMNLGQEPKYPENVETLDPILTTGLMESAMIKDFF 297 >gi|15242638|ref|NP_198845.1| metal-dependent phosphohydrolase HD domain-containing protein [Arabidopsis thaliana] gi|332007147|gb|AED94530.1| metal-dependent phosphohydrolase HD domain-containing protein [Arabidopsis thaliana] Length = 448 Score = 33.9 bits (77), Expect = 8.6, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 37/96 (38%), Gaps = 10/96 (10%) Query: 12 IDVINQIKIENPHLWTKEFQQKSRTMLHEATLL-------EIAYAHETMPKGFVGLNAPS 64 I++I+ I + + ++ + M+ +T + E + ++ + G G++ Sbjct: 144 INMIDYIVDTHHIDVDAKMLKRVKDMILASTEVSELKGNAEKRFLYDIVANGRNGIDVDK 203 Query: 65 CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100 Y+ + + R +G F+ P + I Sbjct: 204 F-DYI--VRDSRACGLGCNFQFQRLTEPMRVIDNEI 236 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.312 0.178 0.630 Lambda K H 0.267 0.0552 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,978,963,137 Number of Sequences: 14124377 Number of extensions: 138775062 Number of successful extensions: 319239 Number of sequences better than 10.0: 2476 Number of HSP's better than 10.0 without gapping: 3038 Number of HSP's successfully gapped in prelim test: 1157 Number of HSP's that attempted gapping in prelim test: 311350 Number of HSP's gapped (non-prelim): 4343 length of query: 125 length of database: 4,842,793,630 effective HSP length: 91 effective length of query: 34 effective length of database: 3,557,475,323 effective search space: 120954160982 effective search space used: 120954160982 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 77 (33.8 bits)