BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254781006|ref|YP_003065419.1| ribonucleotide-diphosphate
reductase subunit beta [Candidatus Liberibacter asiaticus str. psy62]
         (125 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254780845|ref|YP_003065258.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254780964|ref|YP_003065377.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040522|gb|ACT57318.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040641|gb|ACT57437.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 352

 Score =  268 bits (684), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 125/125 (100%), Positives = 125/125 (100%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL
Sbjct: 228 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 287

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA
Sbjct: 288 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 347

Query: 121 ELKWD 125
           ELKWD
Sbjct: 348 ELKWD 352


>gi|254780136|ref|YP_003064549.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254781006|ref|YP_003065419.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254039813|gb|ACT56609.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040683|gb|ACT57479.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 125

 Score =  265 bits (677), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 125/125 (100%), Positives = 125/125 (100%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL
Sbjct: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA
Sbjct: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120

Query: 121 ELKWD 125
           ELKWD
Sbjct: 121 ELKWD 125


>gi|315122301|ref|YP_004062790.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter solanacearum CLso-ZC1]
 gi|313495703|gb|ADR52302.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter solanacearum CLso-ZC1]
          Length = 372

 Score =  209 bits (531), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 94/125 (75%), Positives = 109/125 (87%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDES+HLNFGID+INQIKIENPHLWT++FQQ+ R ML EA LLE+AY  +TMPK F+G+
Sbjct: 248 MRDESVHLNFGIDMINQIKIENPHLWTEDFQQEVRKMLQEAALLEVAYGKDTMPKPFLGI 307

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CE+YM FI NRRC QIGL+P+F+ TENPFPWMSEVIDL+KEKNFFETRVTEYQ+G 
Sbjct: 308 NANLCEKYMYFITNRRCTQIGLDPVFEKTENPFPWMSEVIDLQKEKNFFETRVTEYQKGT 367

Query: 121 ELKWD 125
            L WD
Sbjct: 368 SLDWD 372


>gi|209885874|ref|YP_002289731.1| ribonucleoside-diphosphate reductase, beta subunit [Oligotropha
           carboxidovorans OM5]
 gi|209874070|gb|ACI93866.1| ribonucleoside-diphosphate reductase, beta subunit [Oligotropha
           carboxidovorans OM5]
          Length = 377

 Score =  206 bits (523), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 92/125 (73%), Positives = 102/125 (81%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENPHLWTK FQ + R M+ EA  LE AY  +TMP+GF+GL
Sbjct: 253 LRDESIHLNFGIDVINQIKLENPHLWTKAFQDEVRGMISEAAGLEAAYGRDTMPRGFLGL 312

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CEQYM FIANRRC QIGL P+F  TENPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 313 NAALCEQYMHFIANRRCAQIGLAPVFAETENPFPWMSEAMDLKKEKNFFETRVIEYQNGG 372

Query: 121 ELKWD 125
            L WD
Sbjct: 373 ALSWD 377


>gi|256377255|ref|YP_003100915.1| ribonucleoside-diphosphate reductase [Actinosynnema mirum DSM
           43827]
 gi|255921558|gb|ACU37069.1| Ribonucleoside-diphosphate reductase [Actinosynnema mirum DSM
           43827]
          Length = 358

 Score =  202 bits (514), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 91/125 (72%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID INQIKIENPHLW + FQ + RTML EA  LEIAY  +TMP G +GL
Sbjct: 234 LRDESIHLNFGIDAINQIKIENPHLWGEAFQAEVRTMLAEACELEIAYGRDTMPNGLLGL 293

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CEQYM+FI NRRC Q+GLEP+F  TENPFPWMSE +DLKKEKNFFETRVTEY  G 
Sbjct: 294 NAELCEQYMRFITNRRCAQLGLEPVFAATENPFPWMSEAVDLKKEKNFFETRVTEYASGG 353

Query: 121 ELKWD 125
            L WD
Sbjct: 354 TLDWD 358


>gi|134097869|ref|YP_001103530.1| ribonucleotide-diphosphate reductase subunit beta
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291007412|ref|ZP_06565385.1| ribonucleotide-diphosphate reductase subunit beta
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133910492|emb|CAM00605.1| ribonucleoside-diphosphate reductase, beta subunit
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 360

 Score =  201 bits (512), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 90/125 (72%), Positives = 103/125 (82%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID INQIKIENPHLWT EFQ++ RTML EA  LE+AY  +TMP+G +GL
Sbjct: 236 LRDESIHLNFGIDCINQIKIENPHLWTPEFQEEVRTMLTEACELEVAYGRDTMPRGILGL 295

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CE+YM+FI NRRC Q+GLEP+F  T NPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 296 NAGLCEEYMRFITNRRCAQLGLEPVFPETANPFPWMSEAMDLKKEKNFFETRVIEYQSGG 355

Query: 121 ELKWD 125
            L WD
Sbjct: 356 ALDWD 360


>gi|226227154|ref|YP_002761260.1| ribonucleoside-diphosphate reductase beta subunit [Gemmatimonas
           aurantiaca T-27]
 gi|226090345|dbj|BAH38790.1| ribonucleoside-diphosphate reductase beta subunit [Gemmatimonas
           aurantiaca T-27]
          Length = 371

 Score =  201 bits (511), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 89/125 (71%), Positives = 102/125 (81%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENPHLW+  FQ++ R ML EA  LE+AY  +TMP+GF+GL
Sbjct: 247 LRDESIHLNFGIDVINQIKVENPHLWSAAFQEEVRQMLAEACELEVAYGRDTMPRGFLGL 306

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CE YM FI NRRC Q+GL P+F  T+NPFPWMSE IDLKKEKNFFETRV EYQ G 
Sbjct: 307 NAALCETYMHFITNRRCAQLGLAPVFPETDNPFPWMSEAIDLKKEKNFFETRVIEYQNGG 366

Query: 121 ELKWD 125
            LKWD
Sbjct: 367 ALKWD 371


>gi|110635036|ref|YP_675244.1| ribonucleotide-diphosphate reductase subunit beta [Mesorhizobium
           sp. BNC1]
 gi|110286020|gb|ABG64079.1| ribonucleotide reductase [Chelativorans sp. BNC1]
          Length = 369

 Score =  200 bits (509), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 91/125 (72%), Positives = 102/125 (81%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK ENPHLWT EFQ++ R ML +A  LE AY  +TMP+GF+GL
Sbjct: 245 LRDESIHLNFGIDVINQIKHENPHLWTPEFQEELRRMLKDAAELEAAYGRDTMPRGFLGL 304

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CEQYM FIANRRC Q+GL P+F  TENPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 305 NAGQCEQYMHFIANRRCAQLGLPPVFPETENPFPWMSEAMDLKKEKNFFETRVIEYQNGG 364

Query: 121 ELKWD 125
            L WD
Sbjct: 365 ALSWD 369


>gi|72163401|ref|YP_291058.1| ribonucleotide-diphosphate reductase subunit beta [Thermobifida
           fusca YX]
 gi|71917133|gb|AAZ57035.1| ribonucleoside-diphosphate reductase [Thermobifida fusca YX]
          Length = 354

 Score =  199 bits (507), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 91/125 (72%), Positives = 104/125 (83%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLWT+EFQ + RTML EA  LE AY  ETMP+G +GL
Sbjct: 230 LRDESIHLNFGIDVINQIKIENPHLWTEEFQDEVRTMLIEACELEAAYGRETMPRGILGL 289

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CEQYM+FI +RR  Q+GL P+F  TENPFPWMSE++DLKKEKNFFETRV EYQ G+
Sbjct: 290 NAKLCEQYMRFITDRRAEQLGLAPIFGETENPFPWMSEMMDLKKEKNFFETRVIEYQTGS 349

Query: 121 ELKWD 125
            L WD
Sbjct: 350 GLSWD 354


>gi|92119123|ref|YP_578852.1| ribonucleotide-diphosphate reductase subunit beta [Nitrobacter
           hamburgensis X14]
 gi|91802017|gb|ABE64392.1| Ribonucleoside-diphosphate reductase [Nitrobacter hamburgensis X14]
          Length = 416

 Score =  199 bits (507), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 88/125 (70%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW+K FQ++ R ML  A  LE AY  +TMP+GF+GL
Sbjct: 292 LRDESIHLNFGIDVINQIKIENPHLWSKPFQEEVRAMLKNAAELEAAYGRDTMPRGFLGL 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CEQYM  IANRRC Q+GL P+F   +NPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAALCEQYMHVIANRRCAQLGLAPVFAEADNPFPWMSEAMDLKKEKNFFETRVIEYQNGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALAWD 416


>gi|85714830|ref|ZP_01045816.1| ribonucleotide reductase [Nitrobacter sp. Nb-311A]
 gi|85698316|gb|EAQ36187.1| ribonucleotide reductase [Nitrobacter sp. Nb-311A]
          Length = 389

 Score =  199 bits (505), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 89/125 (71%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLWTK FQ + R ML  A  LE AY  +TMP+GF+GL
Sbjct: 265 LRDESIHLNFGIDVINQIKIENPHLWTKTFQDEVRAMLKNAAELEAAYGRDTMPRGFLGL 324

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CE YM  IANRRC Q+GL P+F  T+NPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 325 NAALCETYMHVIANRRCAQLGLAPVFAETDNPFPWMSEAMDLKKEKNFFETRVIEYQNGG 384

Query: 121 ELKWD 125
            L WD
Sbjct: 385 ALAWD 389


>gi|299134880|ref|ZP_07028072.1| Ribonucleoside-diphosphate reductase [Afipia sp. 1NLS2]
 gi|298590690|gb|EFI50893.1| Ribonucleoside-diphosphate reductase [Afipia sp. 1NLS2]
          Length = 373

 Score =  198 bits (504), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 89/125 (71%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+EN HLWTK FQ+  R M+ +A  LE AY  +TMP+GF+GL
Sbjct: 249 LRDESIHLNFGIDVINQIKLENQHLWTKAFQEDVRGMIRDAAELEAAYGRDTMPRGFLGL 308

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CEQYM FIANRRC QIGL P+F  TENPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 309 NAALCEQYMHFIANRRCAQIGLTPVFPETENPFPWMSEAMDLKKEKNFFETRVIEYQNGG 368

Query: 121 ELKWD 125
            L W+
Sbjct: 369 ALSWE 373


>gi|90425007|ref|YP_533377.1| ribonucleotide-diphosphate reductase subunit beta [Rhodopseudomonas
           palustris BisB18]
 gi|90107021|gb|ABD89058.1| Ribonucleoside-diphosphate reductase [Rhodopseudomonas palustris
           BisB18]
          Length = 386

 Score =  198 bits (503), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 89/125 (71%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENP LWT  FQ++ R ML EA  LE AY+ +TMP+GF+GL
Sbjct: 262 LRDESIHLNFGIDVINQIKIENPKLWTAGFQEELRGMLQEAAELEAAYSRDTMPRGFLGL 321

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CEQYM FI NRRC Q+GL P+F   ENPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 322 NAALCEQYMHFITNRRCAQLGLAPIFAEVENPFPWMSETMDLKKEKNFFETRVIEYQNGG 381

Query: 121 ELKWD 125
            L WD
Sbjct: 382 ALTWD 386


>gi|324998522|ref|ZP_08119634.1| ribonucleoside-diphosphate reductase beta chain [Pseudonocardia sp.
           P1]
          Length = 358

 Score =  197 bits (501), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 87/125 (69%), Positives = 103/125 (82%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID INQIKIENPHLWT+EF  + R MLHEA  LE+AYA +TMP+G +GL
Sbjct: 234 LRDESIHLNFGIDCINQIKIENPHLWTEEFAAEIRAMLHEACELEVAYARDTMPRGMLGL 293

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A SCEQY++FI +RR  QIGL PLF   +NPFPWMSE +DL+KEKNFFETRVTEY+ G 
Sbjct: 294 TAESCEQYLRFITDRRAEQIGLAPLFGQADNPFPWMSEAMDLRKEKNFFETRVTEYRTGG 353

Query: 121 ELKWD 125
            L+WD
Sbjct: 354 SLEWD 358


>gi|115525181|ref|YP_782092.1| ribonucleotide reductase [Rhodopseudomonas palustris BisA53]
 gi|115519128|gb|ABJ07112.1| ribonucleotide reductase [Rhodopseudomonas palustris BisA53]
          Length = 223

 Score =  196 bits (497), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 88/125 (70%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENP LWT  FQ++ R ML EA  LE AY  +TMP+GF GL
Sbjct: 99  LRDESIHLNFGIDIINQIKIENPELWTAGFQEELRGMLREAAELEAAYCRDTMPRGFFGL 158

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CEQYM FI NRRC Q+GL P+F   ENPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 159 NAALCEQYMHFITNRRCAQLGLAPIFAEVENPFPWMSETMDLKKEKNFFETRVIEYQNGG 218

Query: 121 ELKWD 125
            L WD
Sbjct: 219 ALTWD 223


>gi|75677068|ref|YP_319489.1| ribonucleotide-diphosphate reductase subunit beta [Nitrobacter
           winogradskyi Nb-255]
 gi|74421938|gb|ABA06137.1| ribonucleotide reductase [Nitrobacter winogradskyi Nb-255]
          Length = 391

 Score =  195 bits (495), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 86/125 (68%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLW+K FQ++ R ML  A  LE AY  +TMP+GF+GL
Sbjct: 267 LRDESIHLNFGIDIINQIKIENPHLWSKPFQEEVRAMLKNAADLEAAYGRDTMPRGFLGL 326

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CE YM  IANRRC Q+GL P+F   +NPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 327 NATLCETYMHVIANRRCAQLGLAPVFPDADNPFPWMSEAMDLKKEKNFFETRVIEYQNGG 386

Query: 121 ELKWD 125
            L WD
Sbjct: 387 ALAWD 391


>gi|297563527|ref|YP_003682501.1| ribonucleoside-diphosphate reductase [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296847975|gb|ADH69995.1| Ribonucleoside-diphosphate reductase [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 360

 Score =  195 bits (495), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 88/125 (70%), Positives = 102/125 (81%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW++EFQ + R ML EA  LE+AY  ETMP+G +GL
Sbjct: 236 LRDESIHLNFGIDVINQIKIENPHLWSEEFQAEVRQMLTEACELEVAYGRETMPRGVLGL 295

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CE+YM FI +RR  QIGL P+F  TENPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 296 NAELCEKYMHFITDRRAEQIGLAPIFGETENPFPWMSEMMDLQKEKNFFETRVIEYQTGG 355

Query: 121 ELKWD 125
            L WD
Sbjct: 356 GLDWD 360


>gi|261855609|ref|YP_003262892.1| ribonucleoside-diphosphate reductase [Halothiobacillus neapolitanus
           c2]
 gi|261836078|gb|ACX95845.1| Ribonucleoside-diphosphate reductase [Halothiobacillus neapolitanus
           c2]
          Length = 398

 Score =  194 bits (493), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 88/124 (70%), Positives = 100/124 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDES+H+NFGIDVINQIKIENPHLWT++F+ +   ML EA  LEIAYA +TMP G +GL
Sbjct: 275 MRDESIHMNFGIDVINQIKIENPHLWTEDFKAEVTRMLKEAAELEIAYARDTMPHGLLGL 334

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  C +Y+ FIANRRC+QIGL  LF    NPFPWMSEVIDLKKEKNFFETRVT+YQ G 
Sbjct: 335 NAEMCAEYLHFIANRRCNQIGLAELFPGATNPFPWMSEVIDLKKEKNFFETRVTDYQTGG 394

Query: 121 ELKW 124
            L W
Sbjct: 395 ALNW 398


>gi|257055668|ref|YP_003133500.1| ribonucleotide reductase, beta subunit [Saccharomonospora viridis
           DSM 43017]
 gi|256585540|gb|ACU96673.1| ribonucleotide reductase, beta subunit [Saccharomonospora viridis
           DSM 43017]
          Length = 349

 Score =  194 bits (492), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 87/125 (69%), Positives = 103/125 (82%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFG+D INQIK ENPHLWT EFQQ+ R ML EA  LE+AYAH+TMP+  +GL
Sbjct: 225 LRDESIHLNFGVDCINQIKAENPHLWTPEFQQQVRDMLVEACELEVAYAHDTMPRPMLGL 284

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A  CEQYM FI +RR  Q+GL+P+F   ENPFPWMSEVIDL+KEKNFFETRVT+Y+ GA
Sbjct: 285 SAELCEQYMHFITDRRAAQLGLDPVFGERENPFPWMSEVIDLRKEKNFFETRVTDYRSGA 344

Query: 121 ELKWD 125
            L WD
Sbjct: 345 ALAWD 349


>gi|300784783|ref|YP_003765074.1| ribonucleoside-diphosphate reductase beta chain [Amycolatopsis
           mediterranei U32]
 gi|299794297|gb|ADJ44672.1| ribonucleoside-diphosphate reductase beta chain [Amycolatopsis
           mediterranei U32]
          Length = 357

 Score =  194 bits (492), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 87/125 (69%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID INQIKIENPHLWT+EFQ + R ML EA  LE+ YA +TMP+G +GL
Sbjct: 233 LRDESIHLNFGIDCINQIKIENPHLWTEEFQAEVRGMLKEACELEVKYARDTMPRGMLGL 292

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A  CEQYM F+ +RR  QIGL P+F  TENPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 293 SAQLCEQYMHFVTDRRAQQIGLAPIFGETENPFPWMSEAMDLKKEKNFFETRVIEYQSGG 352

Query: 121 ELKWD 125
            L WD
Sbjct: 353 ALDWD 357


>gi|302525965|ref|ZP_07278307.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. AA4]
 gi|302434860|gb|EFL06676.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. AA4]
          Length = 357

 Score =  191 bits (485), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 86/125 (68%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID INQIKIENPHLWT+EFQ + R ML EA  LE+ YA +TMP+G +GL
Sbjct: 233 LRDESIHLNFGIDCINQIKIENPHLWTEEFQAEVRGMLQEACELEVKYARDTMPRGMLGL 292

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A  CEQYM FI +RR  QIGL P++   ENPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 293 SADLCEQYMHFITDRRAQQIGLPPIYGENENPFPWMSEAMDLKKEKNFFETRVIEYQSGG 352

Query: 121 ELKWD 125
            L WD
Sbjct: 353 ALDWD 357


>gi|300113307|ref|YP_003759882.1| ribonucleoside-diphosphate reductase [Nitrosococcus watsonii C-113]
 gi|299539244|gb|ADJ27561.1| Ribonucleoside-diphosphate reductase [Nitrosococcus watsonii C-113]
          Length = 412

 Score =  191 bits (484), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 85/125 (68%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDES+H+NFGIDVINQIK+ENPHLW+  F+Q++  M+ EA  LE  YAH+TMP+G +GL
Sbjct: 288 MRDESMHMNFGIDVINQIKLENPHLWSDSFKQETLRMIQEAVSLETQYAHDTMPRGVLGL 347

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  E+Y++FIANRRC QIGL   +    NPFPWMSEV+DLKKEKNFFETRVTEYQ G 
Sbjct: 348 NAPMFEEYLKFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 407

Query: 121 ELKWD 125
            L WD
Sbjct: 408 ALSWD 412


>gi|292490774|ref|YP_003526213.1| ribonucleoside-diphosphate reductase [Nitrosococcus halophilus Nc4]
 gi|291579369|gb|ADE13826.1| Ribonucleoside-diphosphate reductase [Nitrosococcus halophilus Nc4]
          Length = 415

 Score =  191 bits (484), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 85/125 (68%), Positives = 102/125 (81%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDES+H+NFGIDVINQIKIENPHLWT  F+Q++  M+ EA  LE  YA++TMP+G +GL
Sbjct: 291 MRDESMHMNFGIDVINQIKIENPHLWTDSFKQETIQMIREAVSLETQYAYDTMPRGVLGL 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  ++Y++FIANRRC QIGL   +    NPFPWMSE++DLKKEKNFFETRVTEYQ G 
Sbjct: 351 NAPMFDEYLKFIANRRCAQIGLPEQYPGASNPFPWMSEILDLKKEKNFFETRVTEYQTGG 410

Query: 121 ELKWD 125
            LKWD
Sbjct: 411 ALKWD 415


>gi|77165986|ref|YP_344511.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosococcus
           oceani ATCC 19707]
 gi|254436303|ref|ZP_05049809.1| ribonucleoside-diphosphate reductase, beta subunit [Nitrosococcus
           oceani AFC27]
 gi|76884300|gb|ABA58981.1| Ribonucleoside-diphosphate reductase [Nitrosococcus oceani ATCC
           19707]
 gi|207087993|gb|EDZ65266.1| ribonucleoside-diphosphate reductase, beta subunit [Nitrosococcus
           oceani AFC27]
          Length = 412

 Score =  191 bits (484), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 85/125 (68%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDES+H+NFGIDVINQIK+ENPHLW+  F+Q++  M+ EA  LE  YAH+TMP+G +GL
Sbjct: 288 MRDESMHMNFGIDVINQIKLENPHLWSDSFKQETLRMIQEAVSLETQYAHDTMPRGVLGL 347

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  E+Y++FIANRRC QIGL   +    NPFPWMSEV+DLKKEKNFFETRVTEYQ G 
Sbjct: 348 NAPMFEEYLKFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 407

Query: 121 ELKWD 125
            L WD
Sbjct: 408 ALSWD 412


>gi|192291019|ref|YP_001991624.1| ribonucleotide-diphosphate reductase subunit beta [Rhodopseudomonas
           palustris TIE-1]
 gi|192284768|gb|ACF01149.1| Ribonucleoside-diphosphate reductase [Rhodopseudomonas palustris
           TIE-1]
          Length = 373

 Score =  190 bits (482), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 84/125 (67%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+EN  +WT  FQ   R M+H+A  LE AY  +TMP G +GL
Sbjct: 249 LRDESIHLNFGIDVINQIKLENAAVWTASFQDDIRGMIHDAAELEAAYGRDTMPHGLLGL 308

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CE YM FIANRRC Q+GL P+F  T+NPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 309 NAALCESYMHFIANRRCVQLGLRPVFAETDNPFPWMSETMDLKKEKNFFETRVIEYQNGG 368

Query: 121 ELKWD 125
            L WD
Sbjct: 369 ALDWD 373


>gi|220935777|ref|YP_002514676.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219997087|gb|ACL73689.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 408

 Score =  188 bits (478), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIK+ENPHLWT  F+++ RTM+ +A  LE  YA +TMP+G +G+
Sbjct: 284 LRDESMHMNFGIDVINQIKVENPHLWTAAFKEEMRTMIRDAVELEAQYARDTMPRGVLGM 343

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRRC QIGL  ++   ENPFPWMSEV+DLKKEKNFFETRVTEYQ G 
Sbjct: 344 NAAMFEEYLHFIANRRCAQIGLAEIYPGAENPFPWMSEVLDLKKEKNFFETRVTEYQTGG 403

Query: 121 ELKWD 125
            L WD
Sbjct: 404 ALSWD 408


>gi|300022335|ref|YP_003754946.1| ribonucleoside-diphosphate reductase [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299524156|gb|ADJ22625.1| Ribonucleoside-diphosphate reductase [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 374

 Score =  187 bits (476), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 85/125 (68%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK EN HLW+K FQ + R ML +A  LE AY  +TMP G +GL
Sbjct: 250 LRDESIHLNFGIDVINQIKAENAHLWSKAFQDEVRGMLRDAAQLEAAYGRDTMPTGLLGL 309

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N    EQYM+FIANRRC Q+GL P+FK  ENPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 310 NPGLTEQYMEFIANRRCAQLGLTPVFKDRENPFPWMSEAMDLKKEKNFFETRVIEYQNGG 369

Query: 121 ELKWD 125
            L W+
Sbjct: 370 ALSWE 374


>gi|114321252|ref|YP_742935.1| ribonucleotide-diphosphate reductase subunit beta [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114227646|gb|ABI57445.1| Ribonucleoside-diphosphate reductase [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 354

 Score =  187 bits (475), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 102/125 (81%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQI+ ENP LWT +F+Q+  TML EA  LE+AYA +TMP+G +GL
Sbjct: 230 LRDESIHLNFGIDVINQIRHENPELWTNDFEQEVLTMLREAVELEVAYARDTMPRGMLGL 289

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CE+YM FI NRRC Q+GL+ L+    NPFPWMSEV+DL+KEKNFFETRVT+Y+ G 
Sbjct: 290 NADMCEEYMHFITNRRCAQLGLKELYPGATNPFPWMSEVMDLQKEKNFFETRVTDYRTGG 349

Query: 121 ELKWD 125
            L+WD
Sbjct: 350 ALQWD 354


>gi|289208615|ref|YP_003460681.1| ribonucleoside-diphosphate reductase [Thioalkalivibrio sp. K90mix]
 gi|288944246|gb|ADC71945.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp. K90mix]
          Length = 412

 Score =  187 bits (475), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 82/125 (65%), Positives = 102/125 (81%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIK+ENPHLWT+EF+ + RT++ +A  LE  YA +TMP+G +G+
Sbjct: 288 LRDESMHMNFGIDVINQIKVENPHLWTEEFKNEMRTLISDAVELEAQYARDTMPRGVLGM 347

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRRC QIGL  ++   +NPFPWMSEV+DLKKEKNFFETRVTEYQ G 
Sbjct: 348 NAQMFEEYLHFIANRRCAQIGLAEMYPGADNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 407

Query: 121 ELKWD 125
            L WD
Sbjct: 408 ALSWD 412


>gi|288941383|ref|YP_003443623.1| Ribonucleoside-diphosphate reductase [Allochromatium vinosum DSM
           180]
 gi|288896755|gb|ADC62591.1| Ribonucleoside-diphosphate reductase [Allochromatium vinosum DSM
           180]
          Length = 458

 Score =  187 bits (474), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 86/125 (68%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLWT EF+Q+   M+ EA  LE  YAH+TMP+G +GL
Sbjct: 334 LRDESMHMNFGIDVINQIKIENPHLWTPEFRQELVGMIREAVELEARYAHDTMPRGVLGL 393

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y+ FIANRRC QIGL   +    NPFPWMSEV+DLKKEKNFFETRVTEYQ G 
Sbjct: 394 NAQMFEDYLHFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 453

Query: 121 ELKWD 125
            L WD
Sbjct: 454 ALNWD 458


>gi|192360823|ref|YP_001982048.1| ribonucleotide-diphosphate reductase subunit beta [Cellvibrio
           japonicus Ueda107]
 gi|190686988|gb|ACE84666.1| ribonucleoside reductase, beta subunit [Cellvibrio japonicus
           Ueda107]
          Length = 429

 Score =  185 bits (469), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 82/125 (65%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENPHLWT EFQQ+   M+ E T LEI YA ++MP+G +G+
Sbjct: 305 LRDESMHLNFGIDVINQIKLENPHLWTAEFQQEVLQMILEGTELEIQYARDSMPRGVLGM 364

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRRC Q+GL+  F   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 365 NAAMMEEYLHFIANRRCAQLGLKEQFPGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 424

Query: 121 ELKWD 125
            L WD
Sbjct: 425 ALSWD 429


>gi|33593916|ref|NP_881560.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           pertussis Tohama I]
 gi|33598411|ref|NP_886054.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           parapertussis 12822]
 gi|33603351|ref|NP_890911.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           bronchiseptica RB50]
 gi|33563990|emb|CAE43255.1| ribonucleoside-diphosphate reductase beta chain [Bordetella
           pertussis Tohama I]
 gi|33574540|emb|CAE39187.1| ribonucleoside-diphosphate reductase beta chain [Bordetella
           parapertussis]
 gi|33577475|emb|CAE34740.1| ribonucleoside-diphosphate reductase beta chain [Bordetella
           bronchiseptica RB50]
 gi|332383335|gb|AEE68182.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           pertussis CS]
          Length = 398

 Score =  185 bits (469), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 81/125 (64%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK+ENPHLWT EF+++ R +  +A  LE AYA +TMP+G +GL
Sbjct: 274 LRDESMHCNFGIDLINTIKLENPHLWTPEFREEIRELFRKAVELEYAYAEDTMPRGVLGL 333

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRRC QIG+EPLF   ENPFPWM+E+IDLKKE+NFFETRV EYQ G 
Sbjct: 334 NAPMFKSYLRFIANRRCQQIGIEPLFPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 393

Query: 121 ELKWD 125
            L W+
Sbjct: 394 TLSWE 398


>gi|53804295|ref|YP_114081.1| ribonucleotide-diphosphate reductase subunit beta [Methylococcus
           capsulatus str. Bath]
 gi|53758056|gb|AAU92347.1| ribonucleoside-diphosphate reductase, beta subunit [Methylococcus
           capsulatus str. Bath]
          Length = 403

 Score =  185 bits (469), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDES+H+NFGIDVINQIK+ENPHLWT  F+ +   M+ EA  +E  YA++TMP+G +GL
Sbjct: 279 MRDESMHMNFGIDVINQIKVENPHLWTDGFKVEMVQMIREAVDIETQYAYDTMPRGILGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  ++Y+QFIANRRC QIGL   +    NPFPWMSEV+DLKKEKNFFETRVTEYQ G 
Sbjct: 339 NAPMFKEYLQFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 398

Query: 121 ELKWD 125
            L WD
Sbjct: 399 TLSWD 403


>gi|284032753|ref|YP_003382684.1| Ribonucleoside-diphosphate reductase [Kribbella flavida DSM 17836]
 gi|283812046|gb|ADB33885.1| Ribonucleoside-diphosphate reductase [Kribbella flavida DSM 17836]
          Length = 354

 Score =  185 bits (469), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 85/125 (68%), Positives = 94/125 (75%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHLNFGID INQIK+ENPHLWT  FQ + R ML EA  LE+AY   T+P G +GL
Sbjct: 230 LRDESLHLNFGIDCINQIKLENPHLWTPAFQAEVRRMLTEACELEVAYGRATLPNGMLGL 289

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A  CEQYM FI +RR  Q+GL PLF  T NPF WMSEV+DLKKEKNFFETRV EYQ G 
Sbjct: 290 TAELCEQYMHFITDRRAEQLGLAPLFGETRNPFGWMSEVMDLKKEKNFFETRVIEYQSGG 349

Query: 121 ELKWD 125
            L WD
Sbjct: 350 GLSWD 354


>gi|254516739|ref|ZP_05128798.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium NOR5-3]
 gi|219675162|gb|EED31529.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium NOR5-3]
          Length = 441

 Score =  184 bits (468), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENPHLWT+EF+Q++  M+ E T LEI YA +TMP+G +G+
Sbjct: 317 LRDESMHLNFGIDVINQIKLENPHLWTEEFKQEAIQMILEGTQLEIEYARDTMPRGVLGM 376

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFIANRR  QIGL   F   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 377 NAAMMEEYLQFIANRRLSQIGLPEQFPGVQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 436

Query: 121 ELKWD 125
            L WD
Sbjct: 437 ALSWD 441


>gi|30250346|ref|NP_842416.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosomonas
           europaea ATCC 19718]
 gi|30181141|emb|CAD86334.1| Ribonucleotide reductase [Nitrosomonas europaea ATCC 19718]
          Length = 382

 Score =  184 bits (468), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 82/125 (65%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGIDVINQIK+ENPHLWT+EF+++   ++ +A  LE  YA +TMP+G +GL
Sbjct: 258 LRDESMHCNFGIDVINQIKLENPHLWTREFREEISALMRKAVELEYRYAEDTMPRGVLGL 317

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  ++Y++FI NRR HQIGL+PLF    NPFPWMSE+IDLKKEKNFFETRV EYQ G 
Sbjct: 318 NAPMFKEYLRFIINRRSHQIGLDPLFPEAGNPFPWMSEMIDLKKEKNFFETRVIEYQTGG 377

Query: 121 ELKWD 125
            L WD
Sbjct: 378 VLSWD 382


>gi|300703002|ref|YP_003744604.1| ribonucleoside diphosphate reductase 1 subunit beta, ferritin-like
           [Ralstonia solanacearum CFBP2957]
 gi|299070665|emb|CBJ41960.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Ralstonia solanacearum CFBP2957]
          Length = 402

 Score =  184 bits (468), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGLEPLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 338 NAPMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397

Query: 121 ELKWD 125
            L WD
Sbjct: 398 ALSWD 402


>gi|82703584|ref|YP_413150.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosospira
           multiformis ATCC 25196]
 gi|82411649|gb|ABB75758.1| Ribonucleoside-diphosphate reductase [Nitrosospira multiformis ATCC
           25196]
          Length = 408

 Score =  184 bits (467), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 81/125 (64%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGIDV+NQIK+ENPHLWTKEF+ +   ++ +A  LE  YA +TMP+G +GL
Sbjct: 284 LRDESMHCNFGIDVVNQIKMENPHLWTKEFRSEISALMQKAVELEYRYAEDTMPRGVLGL 343

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  ++Y+++IANRRC QIGL+ L+    NPFPWMSE+IDLKKEKNFFETRVTEYQ G 
Sbjct: 344 NAPMFKEYLRYIANRRCQQIGLDILYPGASNPFPWMSEMIDLKKEKNFFETRVTEYQTGG 403

Query: 121 ELKWD 125
            L WD
Sbjct: 404 VLNWD 408


>gi|83746810|ref|ZP_00943858.1| Ribonucleoside-diphosphate reductase beta chain [Ralstonia
           solanacearum UW551]
 gi|207721465|ref|YP_002251905.1| transmembrane ribonucleoside reductase (small chain) protein
           [Ralstonia solanacearum MolK2]
 gi|83726579|gb|EAP73709.1| Ribonucleoside-diphosphate reductase beta chain [Ralstonia
           solanacearum UW551]
 gi|206586625|emb|CAQ17211.1| transmembrane ribonucleoside reductase (small chain) protein
           [Ralstonia solanacearum MolK2]
          Length = 402

 Score =  184 bits (467), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGLEPLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 338 NAPMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397

Query: 121 ELKWD 125
            L WD
Sbjct: 398 ALSWD 402


>gi|330983931|gb|EGH82034.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. lachrymans str. M301315]
          Length = 388

 Score =  184 bits (467), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 81/125 (64%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT E ++++  M+ + T LEIAYA +TMP+G +G+
Sbjct: 264 LRDESMHLNFGIDMINQIKIENPHLWTDELKREATVMIIQGTQLEIAYARDTMPRGVLGM 323

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFIANRR  QIGL  ++   +NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 324 NAAMMEEYLQFIANRRLTQIGLPEVYAGAKNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 383

Query: 121 ELKWD 125
            L WD
Sbjct: 384 ALSWD 388


>gi|207744360|ref|YP_002260752.1| transmembrane ribonucleoside reductase (small chain) protein
           [Ralstonia solanacearum IPO1609]
 gi|206595765|emb|CAQ62692.1| transmembrane ribonucleoside reductase (small chain) protein
           [Ralstonia solanacearum IPO1609]
          Length = 410

 Score =  184 bits (467), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 286 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 345

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGLEPLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 346 NAPMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 405

Query: 121 ELKWD 125
            L WD
Sbjct: 406 ALSWD 410


>gi|163854887|ref|YP_001629185.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           petrii DSM 12804]
 gi|163258615|emb|CAP40914.1| ribonucleoside-diphosphate reductase beta chain [Bordetella petrii]
          Length = 396

 Score =  184 bits (466), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK+ENPHLWT EF+++ R +  +A  LE AYA +TMP+G +GL
Sbjct: 272 LRDESMHCNFGIDLINTIKLENPHLWTPEFREEIRGLFQKAVELEYAYAEDTMPRGVLGL 331

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRRC QIG+EPL+   ENPFPWM+E+IDLKKE+NFFETRV EYQ G 
Sbjct: 332 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 391

Query: 121 ELKWD 125
            L W+
Sbjct: 392 TLSWE 396


>gi|114332419|ref|YP_748641.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosomonas
           eutropha C91]
 gi|114309433|gb|ABI60676.1| Ribonucleoside-diphosphate reductase [Nitrosomonas eutropha C91]
          Length = 377

 Score =  184 bits (466), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 81/125 (64%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGIDVINQIK+ENPHLWT+EF+++   ++ +A  LE  YA +TMP+G +GL
Sbjct: 253 LRDESMHCNFGIDVINQIKLENPHLWTREFREEISALMRKAVELEYRYAEDTMPRGVLGL 312

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  ++Y++FI NRR HQIGL+PLF    NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 313 NAPMFKEYLRFIINRRSHQIGLDPLFPEAGNPFPWMSEMVDLKKEKNFFETRVIEYQTGG 372

Query: 121 ELKWD 125
            L WD
Sbjct: 373 VLSWD 377


>gi|187479453|ref|YP_787478.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella avium
           197N]
 gi|115424040|emb|CAJ50593.1| ribonucleoside-diphosphate reductase beta chain [Bordetella avium
           197N]
          Length = 394

 Score =  184 bits (466), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK+ENPHLWT EF+++ R +  +A  LE AYA +TMP+G +GL
Sbjct: 270 LRDESMHCNFGIDLINTIKLENPHLWTPEFREEIRELFRKAVELEYAYAEDTMPRGVLGL 329

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRRC QIG+EPL+   ENPFPWM+E+IDLKKE+NFFETRV EYQ G 
Sbjct: 330 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 389

Query: 121 ELKWD 125
            L W+
Sbjct: 390 TLSWE 394


>gi|317402620|gb|EFV83180.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter
           xylosoxidans C54]
          Length = 399

 Score =  183 bits (464), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN +K+ENPHLWT EF+++ R +  +A  LE AYA +TMP+G +GL
Sbjct: 275 LRDESMHCNFGIDLINTVKLENPHLWTPEFREEIRELFRKAVELEYAYAEDTMPRGVLGL 334

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRRC QIG+EPL+   ENPFPWM+E+IDLKKE+NFFETRV EYQ G 
Sbjct: 335 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 394

Query: 121 ELKWD 125
            L W+
Sbjct: 395 TLSWE 399


>gi|307546480|ref|YP_003898959.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas
           elongata DSM 2581]
 gi|307218504|emb|CBV43774.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas
           elongata DSM 2581]
          Length = 415

 Score =  183 bits (464), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 82/125 (65%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFG+D+INQIKIENPHLWT EFQ +   M+ E T LEIAYA ++MP+G +G+
Sbjct: 291 LRDESMHLNFGVDMINQIKIENPHLWTPEFQDECTQMILEGTELEIAYARDSMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FI NRR  QIGL+  F   +NPFPWMSE+IDL+KEKNFFETRVTEYQ G 
Sbjct: 351 NAAIMEEYLHFICNRRLAQIGLKEQFPGAQNPFPWMSEIIDLRKEKNFFETRVTEYQVGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|311103857|ref|YP_003976710.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter
           xylosoxidans A8]
 gi|310758546|gb|ADP13995.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter
           xylosoxidans A8]
          Length = 399

 Score =  182 bits (463), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN +K+ENPHLWT EF+++ R +  +A  LE AYA +TMP+G +GL
Sbjct: 275 LRDESMHCNFGIDLINTVKLENPHLWTPEFREEIRELFRKAVELEYAYAEDTMPRGVLGL 334

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRRC QIG+EPL+   ENPFPWM+E+IDLKKE+NFFETRV EYQ G 
Sbjct: 335 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 394

Query: 121 ELKWD 125
            L W+
Sbjct: 395 TLSWE 399


>gi|332286774|ref|YP_004418685.1| ribonucleoside-diphosphate reductase beta chain [Pusillimonas sp.
           T7-7]
 gi|330430727|gb|AEC22061.1| ribonucleoside-diphosphate reductase beta chain [Pusillimonas sp.
           T7-7]
          Length = 387

 Score =  182 bits (463), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 81/125 (64%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK+ENPHLWT EF+++ R +  +A  LE AYA +TMP+G +GL
Sbjct: 263 LRDESMHCNFGIDLINTIKLENPHLWTAEFREELRELFKKAVDLEYAYAEDTMPRGVLGL 322

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FIANRRC QIGLEPLF   ENPFPWM+E+IDLKKE+NFFETRV EYQ G 
Sbjct: 323 NASMFKSYLRFIANRRCQQIGLEPLFGQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 382

Query: 121 ELKWD 125
            L W+
Sbjct: 383 ALSWE 387


>gi|260220050|emb|CBA27200.1| Ribonucleoside-diphosphate reductase subunit alpha [Curvibacter
            putative symbiont of Hydra magnipapillata]
          Length = 1306

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 78/125 (62%), Positives = 98/125 (78%)

Query: 1    MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
            +RDES+H NFGID+INQ+K+ENPHLWT EF+ + + +  +A  LE  YA +TMP+G +G+
Sbjct: 1182 LRDESMHCNFGIDLINQLKLENPHLWTPEFKAEIKALFEKAVELEYRYAEDTMPRGVLGM 1241

Query: 61   NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            NA   + Y+++IANRR  QIGLEPLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 1242 NASMFKGYLRYIANRRATQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 1301

Query: 121  ELKWD 125
             L WD
Sbjct: 1302 ALSWD 1306


>gi|92112799|ref|YP_572727.1| ribonucleotide-diphosphate reductase subunit beta [Chromohalobacter
           salexigens DSM 3043]
 gi|91795889|gb|ABE58028.1| Ribonucleoside-diphosphate reductase [Chromohalobacter salexigens
           DSM 3043]
          Length = 420

 Score =  182 bits (462), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 82/125 (65%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFG+D+INQIKIENPHLWT EFQ +   M+ E T LEIAYA ++MP+G +G+
Sbjct: 296 LRDESMHLNFGVDMINQIKIENPHLWTPEFQDEVTQMIIEGTELEIAYARDSMPRGVLGM 355

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FI NRR  QIGL+  +   ENPFPWMSE+IDL+KEKNFFETRVTEYQ G 
Sbjct: 356 NAAIMEEYLHFICNRRLAQIGLKEQYPGAENPFPWMSEIIDLRKEKNFFETRVTEYQVGG 415

Query: 121 ELKWD 125
            L WD
Sbjct: 416 ALSWD 420


>gi|226940720|ref|YP_002795794.1| ribonucleotide-diphosphate reductase subunit beta [Laribacter
           hongkongensis HLHK9]
 gi|226715647|gb|ACO74785.1| Ribonucleoside-diphosphate reductase beta chain [Laribacter
           hongkongensis HLHK9]
          Length = 357

 Score =  182 bits (462), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK ENPHLWT EFQ++   +  +A  LE AYA +TMP+G +GL
Sbjct: 233 LRDESMHCNFGIDLINSIKQENPHLWTVEFQEELYGLFRKAIDLEYAYAEDTMPRGVLGL 292

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   ++Y+ FIANRR  QIGLEPLF + +NPFPWMSE+IDLKKEKNFFETRVTEYQ G 
Sbjct: 293 NAAMFKEYLDFIANRRMQQIGLEPLFTHVDNPFPWMSEMIDLKKEKNFFETRVTEYQSGG 352

Query: 121 ELKWD 125
            L WD
Sbjct: 353 ALDWD 357


>gi|90022104|ref|YP_527931.1| ribonucleotide-diphosphate reductase subunit beta [Saccharophagus
           degradans 2-40]
 gi|89951704|gb|ABD81719.1| Class Ia ribonucleoside-diphosphate reductase beta subunit
           [Saccharophagus degradans 2-40]
          Length = 423

 Score =  182 bits (461), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENPHLWT+EFQ +++ M+ E T LEIAYA +TMP+G +G+
Sbjct: 299 LRDESMHLNFGIDVINQIKLENPHLWTEEFQAETKQMILEGTELEIAYARDTMPRGVLGM 358

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRR  Q+GL   +   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 359 NAAMMEEYLHFIANRRMAQLGLAEAYPGAKNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 418

Query: 121 ELKWD 125
            L W+
Sbjct: 419 ALSWE 423


>gi|88705571|ref|ZP_01103281.1| ribonucleoside-diphosphate reductase, beta subunit [Congregibacter
           litoralis KT71]
 gi|88700084|gb|EAQ97193.1| ribonucleoside-diphosphate reductase, beta subunit [Congregibacter
           litoralis KT71]
          Length = 469

 Score =  182 bits (461), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 82/125 (65%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENP LWT+EF+Q++  M+ E T LEI YA +TMP+G +G+
Sbjct: 345 LRDESMHLNFGIDVINQIKLENPQLWTEEFKQEAIQMILEGTQLEIEYARDTMPRGVLGM 404

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFIANRR  QIGL   F   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 405 NAAMMEEYLQFIANRRLSQIGLPEQFPGVQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 464

Query: 121 ELKWD 125
            L WD
Sbjct: 465 ALSWD 469


>gi|302877617|ref|YP_003846181.1| Ribonucleoside-diphosphate reductase [Gallionella capsiferriformans
           ES-2]
 gi|302580406|gb|ADL54417.1| Ribonucleoside-diphosphate reductase [Gallionella capsiferriformans
           ES-2]
          Length = 365

 Score =  181 bits (460), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 102/125 (81%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFG+D+INQIK+ENPHLWT  F+++ R ++ +   LE AYA +TMP+G +GL
Sbjct: 241 LRDESMHLNFGVDLINQIKMENPHLWTAAFREEIRGLMQKGVELEYAYAEDTMPRGILGL 300

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   ++Y++FIANRRC QIG++ L++   NPFPWMSE+IDLKKEKNFFE+RVTEYQ G 
Sbjct: 301 NATMFKEYLRFIANRRCQQIGVDILYQGATNPFPWMSEMIDLKKEKNFFESRVTEYQTGG 360

Query: 121 ELKWD 125
            L WD
Sbjct: 361 TLSWD 365


>gi|325519933|gb|EGC99191.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia sp.
           TJI49]
          Length = 403

 Score =  181 bits (459), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|254282900|ref|ZP_04957868.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium NOR51-B]
 gi|219679103|gb|EED35452.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium NOR51-B]
          Length = 421

 Score =  181 bits (459), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENPHLWT EFQ++   M+ E T LEI YA +TMP+G +G+
Sbjct: 297 LRDESMHLNFGIDVINQIKLENPHLWTAEFQEEVVQMILEGTQLEIEYARDTMPRGVLGM 356

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFI NRR +Q+GL   +   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 357 NAAMMEEYLQFICNRRLNQLGLSEQYPGVQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 416

Query: 121 ELKWD 125
            L WD
Sbjct: 417 ALTWD 421


>gi|206561765|ref|YP_002232530.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           cenocepacia J2315]
 gi|254246390|ref|ZP_04939711.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
           cenocepacia PC184]
 gi|124871166|gb|EAY62882.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
           cenocepacia PC184]
 gi|198037807|emb|CAR53751.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           cenocepacia J2315]
          Length = 403

 Score =  181 bits (459), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|119504228|ref|ZP_01626308.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
           proteobacterium HTCC2080]
 gi|119459736|gb|EAW40831.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
           proteobacterium HTCC2080]
          Length = 419

 Score =  181 bits (459), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 82/125 (65%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENP LWT EFQQ++  M+ E T LEIAYA +TMP+G +G+
Sbjct: 295 LRDESMHLNFGIDVINQIKLENPLLWTPEFQQEAIQMILEGTELEIAYARDTMPRGVLGM 354

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFI NRR +Q+GL   F   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 355 NAAMMEEYLQFICNRRLNQVGLPEQFPGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 414

Query: 121 ELKWD 125
            L WD
Sbjct: 415 ALTWD 419


>gi|256822964|ref|YP_003146927.1| Ribonucleoside-diphosphate reductase [Kangiella koreensis DSM
           16069]
 gi|256796503|gb|ACV27159.1| Ribonucleoside-diphosphate reductase [Kangiella koreensis DSM
           16069]
          Length = 421

 Score =  181 bits (459), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 81/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFG+D+INQIK+ENPHLWT EF+Q+   M+ E T LEI YA +TMP+G +G+
Sbjct: 297 LRDESMHLNFGVDIINQIKLENPHLWTAEFKQEVLQMILEGTQLEIEYARDTMPRGVLGM 356

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFI NRR  Q+GL   FK   NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 357 NAGMMEEYLQFICNRRLAQLGLPEQFKNVSNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 416

Query: 121 ELKWD 125
            L WD
Sbjct: 417 ALSWD 421


>gi|293603286|ref|ZP_06685715.1| ribonucleotide-diphosphate reductase subunit beta subunit
           [Achromobacter piechaudii ATCC 43553]
 gi|292818321|gb|EFF77373.1| ribonucleotide-diphosphate reductase subunit beta subunit
           [Achromobacter piechaudii ATCC 43553]
          Length = 398

 Score =  181 bits (458), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN +K+ENPHLWT  F+++ R +  +A  LE AYA +TMP+G +GL
Sbjct: 274 LRDESMHCNFGIDLINTVKLENPHLWTPAFREEIRELFRKAVELEYAYAEDTMPRGVLGL 333

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRRC QIG+EPL+   ENPFPWM+E+IDLKKE+NFFETRV EYQ G 
Sbjct: 334 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 393

Query: 121 ELKWD 125
            L W+
Sbjct: 394 TLSWE 398


>gi|291615085|ref|YP_003525242.1| ribonucleoside-diphosphate reductase [Sideroxydans lithotrophicus
           ES-1]
 gi|291585197|gb|ADE12855.1| Ribonucleoside-diphosphate reductase [Sideroxydans lithotrophicus
           ES-1]
          Length = 382

 Score =  181 bits (458), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFG+DVINQIK+ENPHLWT  F+++ R ++ +   LE  YA +TMP+G +GL
Sbjct: 258 LRDESMHLNFGVDVINQIKLENPHLWTPAFREEVRGLIQKGVELEYRYAEDTMPRGVLGL 317

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   ++Y++FIANRRC QIG++ L++   NPFPWM+E+IDLKKEKNFFETRVTEYQ G 
Sbjct: 318 NAGMFKEYLRFIANRRCQQIGVDMLYQGATNPFPWMAEMIDLKKEKNFFETRVTEYQTGG 377

Query: 121 ELKWD 125
            L WD
Sbjct: 378 ALSWD 382


>gi|161525957|ref|YP_001580969.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           multivorans ATCC 17616]
 gi|160343386|gb|ABX16472.1| Ribonucleoside-diphosphate reductase [Burkholderia multivorans ATCC
           17616]
          Length = 396

 Score =  181 bits (458), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 272 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 331

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 332 NASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 391

Query: 121 ELKWD 125
            L W+
Sbjct: 392 ALSWE 396


>gi|76808925|ref|YP_334881.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 1710b]
 gi|254208116|ref|ZP_04914466.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei JHU]
 gi|76578378|gb|ABA47853.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           pseudomallei 1710b]
 gi|147752010|gb|EDK59077.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei JHU]
          Length = 376

 Score =  181 bits (458), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 252 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 311

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 312 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 371

Query: 121 ELKWD 125
            L W+
Sbjct: 372 ALSWE 376


>gi|189349324|ref|YP_001944952.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           multivorans ATCC 17616]
 gi|221213238|ref|ZP_03586213.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD1]
 gi|189333346|dbj|BAG42416.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           multivorans ATCC 17616]
 gi|221166690|gb|EED99161.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD1]
          Length = 403

 Score =  181 bits (458), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|121598515|ref|YP_991780.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           mallei SAVP1]
 gi|124385654|ref|YP_001027273.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           mallei NCTC 10229]
 gi|126439848|ref|YP_001060484.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 668]
 gi|126451145|ref|YP_001082790.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           mallei NCTC 10247]
 gi|126453692|ref|YP_001067748.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 1106a]
 gi|134280207|ref|ZP_01766918.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 305]
 gi|166998593|ref|ZP_02264451.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei PRL-20]
 gi|167721297|ref|ZP_02404533.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei DM98]
 gi|167740266|ref|ZP_02413040.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 14]
 gi|167817486|ref|ZP_02449166.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 91]
 gi|167847373|ref|ZP_02472881.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei B7210]
 gi|167895962|ref|ZP_02483364.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 7894]
 gi|167904346|ref|ZP_02491551.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei NCTC 13177]
 gi|167912606|ref|ZP_02499697.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 112]
 gi|217420440|ref|ZP_03451945.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 576]
 gi|226196790|ref|ZP_03792369.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei Pakistan 9]
 gi|237813879|ref|YP_002898330.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei MSHR346]
 gi|238561262|ref|ZP_00442338.2| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei GB8 horse 4]
 gi|242316188|ref|ZP_04815204.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1106b]
 gi|254178822|ref|ZP_04885476.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei ATCC 10399]
 gi|254199038|ref|ZP_04905453.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei S13]
 gi|254202774|ref|ZP_04909137.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei FMH]
 gi|254259655|ref|ZP_04950709.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1710a]
 gi|254299327|ref|ZP_04966777.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 406e]
 gi|121227325|gb|ABM49843.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei SAVP1]
 gi|124293674|gb|ABN02943.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei NCTC 10229]
 gi|126219341|gb|ABN82847.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 668]
 gi|126227334|gb|ABN90874.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1106a]
 gi|126244015|gb|ABO07108.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei NCTC 10247]
 gi|134248214|gb|EBA48297.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 305]
 gi|147747021|gb|EDK54098.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei FMH]
 gi|157808756|gb|EDO85926.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 406e]
 gi|160694736|gb|EDP84744.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei ATCC 10399]
 gi|169656868|gb|EDS88265.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei S13]
 gi|217395852|gb|EEC35869.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 576]
 gi|225931050|gb|EEH27058.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei Pakistan 9]
 gi|237506031|gb|ACQ98349.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei MSHR346]
 gi|238524965|gb|EEP88395.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei GB8 horse 4]
 gi|242139427|gb|EES25829.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1106b]
 gi|243065276|gb|EES47462.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei PRL-20]
 gi|254218344|gb|EET07728.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1710a]
          Length = 403

 Score =  180 bits (457), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|83719302|ref|YP_441701.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis E264]
 gi|83653127|gb|ABC37190.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           thailandensis E264]
          Length = 377

 Score =  180 bits (457), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 253 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 312

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 313 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 372

Query: 121 ELKWD 125
            L W+
Sbjct: 373 ALSWE 377


>gi|167825888|ref|ZP_02457359.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 9]
 gi|167924622|ref|ZP_02511713.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei BCC215]
 gi|254180586|ref|ZP_04887184.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1655]
 gi|254190977|ref|ZP_04897483.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei Pasteur 52237]
 gi|157938651|gb|EDO94321.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei Pasteur 52237]
 gi|184211125|gb|EDU08168.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1655]
          Length = 372

 Score =  180 bits (457), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 248 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 307

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 308 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 367

Query: 121 ELKWD 125
            L W+
Sbjct: 368 ALSWE 372


>gi|167574685|ref|ZP_02367559.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           oklahomensis C6786]
          Length = 369

 Score =  180 bits (457), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 245 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 304

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 305 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 364

Query: 121 ELKWD 125
            L W+
Sbjct: 365 ALSWE 369


>gi|254784923|ref|YP_003072351.1| ribonucleotide-diphosphate reductase subunit beta [Teredinibacter
           turnerae T7901]
 gi|237687536|gb|ACR14800.1| ribonucleoside-diphosphate reductase [Teredinibacter turnerae
           T7901]
          Length = 453

 Score =  180 bits (457), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 99/124 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENPHLWT+ FQQ+ + M+ E T LEI YA +TMP+G +G+
Sbjct: 330 LRDESMHLNFGIDVINQIKLENPHLWTESFQQEVKQMVLEGTELEIGYARDTMPRGVLGM 389

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRR  Q+GL+  +   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 390 NAAIMEEYLHFIANRRLAQLGLKEAYPGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 449

Query: 121 ELKW 124
            L W
Sbjct: 450 ALSW 453


>gi|167564160|ref|ZP_02357076.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           oklahomensis EO147]
          Length = 369

 Score =  180 bits (457), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 245 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 304

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 305 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 364

Query: 121 ELKWD 125
            L W+
Sbjct: 365 ALSWE 369


>gi|295677726|ref|YP_003606250.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1002]
 gi|295437569|gb|ADG16739.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1002]
          Length = 411

 Score =  180 bits (457), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 287 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRAIFQQAVELEYRYAEDTMPRGVLGL 346

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 347 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 406

Query: 121 ELKWD 125
            L W+
Sbjct: 407 ALSWE 411


>gi|209521089|ref|ZP_03269819.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. H160]
 gi|209498472|gb|EDZ98597.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. H160]
          Length = 411

 Score =  180 bits (456), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 287 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRAIFQQAVELEYRYAEDTMPRGVLGL 346

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 347 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 406

Query: 121 ELKWD 125
            L W+
Sbjct: 407 ALSWE 411


>gi|115350552|ref|YP_772391.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           ambifaria AMMD]
 gi|172059584|ref|YP_001807236.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           ambifaria MC40-6]
 gi|115280540|gb|ABI86057.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria AMMD]
 gi|171992101|gb|ACB63020.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria
           MC40-6]
          Length = 403

 Score =  180 bits (456), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|170699976|ref|ZP_02891003.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria
           IOP40-10]
 gi|170135124|gb|EDT03425.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria
           IOP40-10]
          Length = 403

 Score =  180 bits (456), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|73542624|ref|YP_297144.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           eutropha JMP134]
 gi|72120037|gb|AAZ62300.1| Ribonucleoside-diphosphate reductase [Ralstonia eutropha JMP134]
          Length = 394

 Score =  180 bits (456), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 81/125 (64%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 270 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 329

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 330 NAPMFKSYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 389

Query: 121 ELKWD 125
            L WD
Sbjct: 390 ALSWD 394


>gi|325983070|ref|YP_004295472.1| ribonucleoside-diphosphate reductase [Nitrosomonas sp. AL212]
 gi|325532589|gb|ADZ27310.1| Ribonucleoside-diphosphate reductase [Nitrosomonas sp. AL212]
          Length = 381

 Score =  180 bits (456), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGIDVINQIK+ENP LWTK F+++   ++ +A  LE  YA +TMP+G +G+
Sbjct: 257 LRDESMHCNFGIDVINQIKMENPQLWTKAFREEIAALMQKAVALEYRYAEDTMPRGVLGM 316

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  ++Y+++IANRRC QIGL+ L+    NPFPWMSE++DLKKEKNFFETRVTEYQ G 
Sbjct: 317 NAPMFKEYLRYIANRRCQQIGLDTLYPNANNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 376

Query: 121 ELKWD 125
            L WD
Sbjct: 377 ALSWD 381


>gi|194290770|ref|YP_002006677.1| ribonucleotide-diphosphate reductase subunit beta [Cupriavidus
           taiwanensis LMG 19424]
 gi|193224605|emb|CAQ70616.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Cupriavidus taiwanensis LMG 19424]
          Length = 396

 Score =  180 bits (456), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 81/125 (64%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 272 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 331

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 332 NAPMFKSYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 391

Query: 121 ELKWD 125
            L WD
Sbjct: 392 ALSWD 396


>gi|113869188|ref|YP_727677.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           eutropha H16]
 gi|113527964|emb|CAJ94309.1| Ribonucleoside-diphosphate reductase beta subunit [Ralstonia
           eutropha H16]
          Length = 395

 Score =  180 bits (456), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 81/125 (64%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 271 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 330

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 331 NAPMFKSYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 390

Query: 121 ELKWD 125
            L WD
Sbjct: 391 ALSWD 395


>gi|221202418|ref|ZP_03575450.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD2M]
 gi|221208122|ref|ZP_03581127.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD2]
 gi|221172025|gb|EEE04467.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD2]
 gi|221177695|gb|EEE10110.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD2M]
          Length = 372

 Score =  180 bits (456), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 248 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 307

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 308 NASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 367

Query: 121 ELKWD 125
            L W+
Sbjct: 368 ALSWE 372


>gi|171318520|ref|ZP_02907672.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria MEX-5]
 gi|171096306|gb|EDT41212.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria MEX-5]
          Length = 403

 Score =  180 bits (456), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|53720599|ref|YP_109585.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei K96243]
 gi|53726102|ref|YP_104055.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           mallei ATCC 23344]
 gi|52211013|emb|CAH37001.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           pseudomallei K96243]
 gi|52429525|gb|AAU50118.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei ATCC 23344]
          Length = 350

 Score =  180 bits (456), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 226 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 285

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 286 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 345

Query: 121 ELKWD 125
            L W+
Sbjct: 346 ALSWE 350


>gi|238026167|ref|YP_002910398.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           glumae BGR1]
 gi|237875361|gb|ACR27694.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           glumae BGR1]
          Length = 407

 Score =  180 bits (456), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 283 LRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIRELFKRAVELEYRYAEDTMPRGVLGL 342

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FIANRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 343 NAAMFKSYLRFIANRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 402

Query: 121 ELKWD 125
            L W+
Sbjct: 403 ALSWE 407


>gi|167580513|ref|ZP_02373387.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis TXDOH]
 gi|167618621|ref|ZP_02387252.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis Bt4]
 gi|257137870|ref|ZP_05586132.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis E264]
          Length = 350

 Score =  180 bits (456), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 226 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 285

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 286 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 345

Query: 121 ELKWD 125
            L W+
Sbjct: 346 ALSWE 350


>gi|254253304|ref|ZP_04946622.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
           dolosa AUO158]
 gi|124895913|gb|EAY69793.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
           dolosa AUO158]
          Length = 403

 Score =  180 bits (456), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|107021673|ref|YP_620000.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           cenocepacia AU 1054]
 gi|116688619|ref|YP_834242.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           cenocepacia HI2424]
 gi|105891862|gb|ABF75027.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia AU
           1054]
 gi|116646708|gb|ABK07349.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia
           HI2424]
          Length = 382

 Score =  180 bits (456), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 258 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 317

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 318 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 377

Query: 121 ELKWD 125
            L W+
Sbjct: 378 ALSWE 382


>gi|78065156|ref|YP_367925.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia sp.
           383]
 gi|77965901|gb|ABB07281.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. 383]
          Length = 403

 Score =  180 bits (456), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|170731918|ref|YP_001763865.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           cenocepacia MC0-3]
 gi|169815160|gb|ACA89743.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia
           MC0-3]
          Length = 403

 Score =  180 bits (456), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|167837963|ref|ZP_02464822.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis MSMB43]
          Length = 303

 Score =  179 bits (455), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 179 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 238

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 239 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 298

Query: 121 ELKWD 125
            L W+
Sbjct: 299 ALSWE 303


>gi|329893650|ref|ZP_08269784.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
           proteobacterium IMCC3088]
 gi|328923577|gb|EGG30889.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
           proteobacterium IMCC3088]
          Length = 432

 Score =  179 bits (455), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENPHLWT++FQ++   ML E T +EI YA +TMP+G +G+
Sbjct: 308 LRDESMHLNFGIDVINQIKLENPHLWTEDFQKEVIQMLLEGTQIEIEYARDTMPRGVLGM 367

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFI NRR  Q+GL   F   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 368 NAAMMEEYLQFICNRRLAQLGLPEQFPGVQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 427

Query: 121 ELKWD 125
            L WD
Sbjct: 428 ALSWD 432


>gi|94312018|ref|YP_585228.1| ribonucleotide-diphosphate reductase subunit beta [Cupriavidus
           metallidurans CH34]
 gi|93355870|gb|ABF09959.1| Ribonucleoside-diphosphate reductase beta subunit [Cupriavidus
           metallidurans CH34]
          Length = 395

 Score =  179 bits (454), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 81/125 (64%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 271 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 330

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 331 NAPMFKGYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 390

Query: 121 ELKWD 125
            L WD
Sbjct: 391 ALSWD 395


>gi|297538242|ref|YP_003674011.1| Ribonucleoside-diphosphate reductase [Methylotenera sp. 301]
 gi|297257589|gb|ADI29434.1| Ribonucleoside-diphosphate reductase [Methylotenera sp. 301]
          Length = 376

 Score =  179 bits (454), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGIDVIN IK+ENPHLWT EF+++ +T++ +   LE  YA  TMP+G +GL
Sbjct: 252 LRDESMHCNFGIDVINTIKLENPHLWTAEFREEIKTLMQKGVELEYQYAEATMPRGVLGL 311

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   ++Y++FIANRRC QIGL+ L+    NPFPWMSE++DLKKEKNFFETRVTEYQ G 
Sbjct: 312 NATMFKEYLRFIANRRCTQIGLDVLYPGATNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 371

Query: 121 ELKWD 125
            L WD
Sbjct: 372 ALSWD 376


>gi|320323423|gb|EFW79511.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320327620|gb|EFW83632.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330876273|gb|EGH10422.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 415

 Score =  179 bits (454), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|70731866|ref|YP_261608.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           fluorescens Pf-5]
 gi|68346165|gb|AAY93771.1| ribonucleoside-diphosphate reductase, beta subunit, putative
           [Pseudomonas fluorescens Pf-5]
          Length = 415

 Score =  179 bits (454), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|134294683|ref|YP_001118418.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           vietnamiensis G4]
 gi|134137840|gb|ABO53583.1| Ribonucleoside-diphosphate reductase [Burkholderia vietnamiensis
           G4]
          Length = 403

 Score =  179 bits (454), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|330811278|ref|YP_004355740.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327379386|gb|AEA70736.1| Ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 415

 Score =  179 bits (454), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|28868867|ref|NP_791486.1| ribonucleoside-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213969520|ref|ZP_03397656.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           syringae pv. tomato T1]
 gi|301385974|ref|ZP_07234392.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tomato Max13]
 gi|302058701|ref|ZP_07250242.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tomato K40]
 gi|302134408|ref|ZP_07260398.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|28852106|gb|AAO55181.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213925616|gb|EEB59175.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           syringae pv. tomato T1]
 gi|330960626|gb|EGH60886.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. maculicola str. ES4326]
 gi|331016758|gb|EGH96814.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 415

 Score =  179 bits (454), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|77460516|ref|YP_350023.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           fluorescens Pf0-1]
 gi|77384519|gb|ABA76032.1| ribonucleoside-diphosphate reductase beta chain [Pseudomonas
           fluorescens Pf0-1]
          Length = 416

 Score =  179 bits (454), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEASQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|66046950|ref|YP_236791.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. syringae B728a]
 gi|237798938|ref|ZP_04587399.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|237806191|ref|ZP_04592895.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|63257657|gb|AAY38753.1| Ribonucleoside-diphosphate reductase [Pseudomonas syringae pv.
           syringae B728a]
 gi|330980156|gb|EGH78342.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. aptata str. DSM 50252]
 gi|331021792|gb|EGI01849.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331027304|gb|EGI07359.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 415

 Score =  179 bits (454), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|330892405|gb|EGH25066.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 415

 Score =  179 bits (453), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|330880140|gb|EGH14289.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
 gi|330966559|gb|EGH66819.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. actinidiae str. M302091]
          Length = 415

 Score =  179 bits (453), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|71737432|ref|YP_275887.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|257485935|ref|ZP_05639976.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|289628680|ref|ZP_06461634.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289648392|ref|ZP_06479735.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|298487941|ref|ZP_07005980.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|302184861|ref|ZP_07261534.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. syringae 642]
 gi|71557985|gb|AAZ37196.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|298157492|gb|EFH98573.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|330866023|gb|EGH00732.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. aesculi str. 0893_23]
 gi|330896997|gb|EGH28545.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. japonica str. M301072PT]
 gi|330986742|gb|EGH84845.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. lachrymans str. M301315]
 gi|331010341|gb|EGH90397.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 415

 Score =  179 bits (453), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|167586060|ref|ZP_02378448.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           ubonensis Bu]
          Length = 403

 Score =  179 bits (453), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVDLEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|17547523|ref|NP_520925.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           solanacearum GMI1000]
 gi|17429827|emb|CAD16511.1| putative transmembrane ribonucleoside reductase (small chain)
           oxidoreductase protein [Ralstonia solanacearum GMI1000]
          Length = 400

 Score =  179 bits (453), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 276 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 335

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGL+ LF   +NPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 336 NAPMFKGYLRFICNRRCQQIGLDALFPNEDNPFPWMSEMIDLKKERNFFETRVIEYQTGG 395

Query: 121 ELKWD 125
            L WD
Sbjct: 396 ALSWD 400


>gi|312960686|ref|ZP_07775192.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           fluorescens WH6]
 gi|311285212|gb|EFQ63787.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           fluorescens WH6]
          Length = 416

 Score =  179 bits (453), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|299065648|emb|CBJ36820.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Ralstonia solanacearum CMR15]
          Length = 398

 Score =  179 bits (453), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 274 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 333

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGL+ LF   +NPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 334 NAPMFKGYLRFICNRRCQQIGLDALFPNEDNPFPWMSEMIDLKKERNFFETRVIEYQTGG 393

Query: 121 ELKWD 125
            L WD
Sbjct: 394 ALSWD 398


>gi|229590245|ref|YP_002872364.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           fluorescens SBW25]
 gi|229362111|emb|CAY49013.1| putative ribonucleoside-diphosphate reductase beta chain
           [Pseudomonas fluorescens SBW25]
          Length = 416

 Score =  179 bits (453), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|152980709|ref|YP_001354668.1| ribonucleotide-diphosphate reductase subunit beta
           [Janthinobacterium sp. Marseille]
 gi|151280786|gb|ABR89196.1| ribonucleoside-diphosphate reductase beta chain [Janthinobacterium
           sp. Marseille]
          Length = 392

 Score =  179 bits (453), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK+ENPHLWT +F+++ +T+   A  LE  YA +TMP+G +GL
Sbjct: 268 LRDESMHCNFGIDLINTIKLENPHLWTPQFREEIKTLFLRAVELEYRYAEDTMPRGVLGL 327

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRR  QIGLEP+F+  ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 328 NAPMFKGYLRFIANRRAQQIGLEPMFEQEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 387

Query: 121 ELKWD 125
            L W+
Sbjct: 388 ALNWE 392


>gi|312962626|ref|ZP_07777115.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           fluorescens WH6]
 gi|311283001|gb|EFQ61593.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           fluorescens WH6]
          Length = 136

 Score =  179 bits (453), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 12  LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 71

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 72  NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 131

Query: 121 ELKWD 125
            L WD
Sbjct: 132 ALSWD 136


>gi|253997287|ref|YP_003049351.1| Ribonucleoside-diphosphate reductase [Methylotenera mobilis JLW8]
 gi|253983966|gb|ACT48824.1| Ribonucleoside-diphosphate reductase [Methylotenera mobilis JLW8]
          Length = 377

 Score =  179 bits (453), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGIDVIN IK+ENPHLWT EF+ + + ++     LE  YA  TMP+G +GL
Sbjct: 253 LRDESMHCNFGIDVINTIKLENPHLWTAEFRDEIKGLIQHGVELEYRYAEATMPRGVLGL 312

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   ++Y++FIANRRC QIGL+ L++   NPFPWMSE+IDLKKEKNFFETRVTEYQ G 
Sbjct: 313 NATMFKEYLRFIANRRCQQIGLDVLYQGATNPFPWMSEMIDLKKEKNFFETRVTEYQTGG 372

Query: 121 ELKWD 125
            L WD
Sbjct: 373 ALSWD 377


>gi|229592166|ref|YP_002874285.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           fluorescens SBW25]
 gi|229364032|emb|CAY51597.1| ribonucleoside-diphosphate reductase beta chain [Pseudomonas
           fluorescens SBW25]
          Length = 416

 Score =  178 bits (452), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|187930114|ref|YP_001900601.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           pickettii 12J]
 gi|187727004|gb|ACD28169.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12J]
          Length = 402

 Score =  178 bits (451), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 338 NAPMFKGYLRFICNRRCQQIGLDALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397

Query: 121 ELKWD 125
            L W+
Sbjct: 398 ALSWE 402


>gi|331006663|ref|ZP_08329944.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
           proteobacterium IMCC1989]
 gi|330419531|gb|EGG93916.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
           proteobacterium IMCC1989]
          Length = 444

 Score =  177 bits (450), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIK+ENPHLWT+EF+ +   M+ E T LEIAYA +TMP+G +G+
Sbjct: 320 LRDESMHLNFGIDIINQIKLENPHLWTEEFKAEVTQMVLEGTELEIAYARDTMPRGVLGM 379

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFI+NRR  Q+GL   +   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 380 NAAMMEEYLQFISNRRLAQLGLTEQYPGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 439

Query: 121 ELKWD 125
            L W+
Sbjct: 440 ALTWE 444


>gi|300690381|ref|YP_003751376.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Ralstonia solanacearum PSI07]
 gi|299077441|emb|CBJ50067.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Ralstonia solanacearum PSI07]
          Length = 402

 Score =  177 bits (450), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 338 NAPMFKGYLRFICNRRCQQIGLDALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397

Query: 121 ELKWD 125
            L W+
Sbjct: 398 ALSWE 402


>gi|241664219|ref|YP_002982579.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           pickettii 12D]
 gi|309783064|ref|ZP_07677783.1| ribonucleoside-diphosphate reductase, beta subunit [Ralstonia sp.
           5_7_47FAA]
 gi|240866246|gb|ACS63907.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D]
 gi|308918172|gb|EFP63850.1| ribonucleoside-diphosphate reductase, beta subunit [Ralstonia sp.
           5_7_47FAA]
          Length = 402

 Score =  177 bits (450), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 338 NAPMFKGYLRFICNRRCQQIGLDALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397

Query: 121 ELKWD 125
            L W+
Sbjct: 398 ALSWE 402


>gi|300309722|ref|YP_003773814.1| transmembrane ribonucleoside reductase small subunit
           [Herbaspirillum seropedicae SmR1]
 gi|300072507|gb|ADJ61906.1| transmembrane ribonucleoside reductase (small chain) protein
           [Herbaspirillum seropedicae SmR1]
          Length = 388

 Score =  177 bits (450), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN +K+ENPHLWT EF+++ +++   A  LE  YA +TMP+G +GL
Sbjct: 264 LRDESMHCNFGIDLINTVKMENPHLWTPEFREEIKSLFLRAVELEYRYAEDTMPRGVLGL 323

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRR  QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 324 NAPMFKSYLRFIANRRAQQIGLDPLFAQEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 383

Query: 121 ELKWD 125
            L W+
Sbjct: 384 ALSWE 388


>gi|289677030|ref|ZP_06497920.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. syringae FF5]
          Length = 243

 Score =  177 bits (450), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 119 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 178

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 179 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 238

Query: 121 ELKWD 125
            L WD
Sbjct: 239 ALSWD 243


>gi|110833571|ref|YP_692430.1| ribonucleotide-diphosphate reductase subunit beta [Alcanivorax
           borkumensis SK2]
 gi|110646682|emb|CAL16158.1| ribonucleoside reductase, beta subunit [Alcanivorax borkumensis
           SK2]
          Length = 430

 Score =  177 bits (449), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIK+ENPHLW  + + K+  M+ E T LEI YA +TMP+G +G+
Sbjct: 306 LRDESMHVNFGIDVINQIKLENPHLWDAQMRDKATQMILEGTELEIQYARDTMPRGVLGM 365

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFIANRR  Q+GL   FK   NPFPWMSE++DL+KEKNFFETRVTEYQ G 
Sbjct: 366 NAAMMEEYLQFIANRRLAQLGLPEQFKGVNNPFPWMSEIMDLRKEKNFFETRVTEYQVGG 425

Query: 121 ELKWD 125
            L W+
Sbjct: 426 ALSWE 430


>gi|119713586|gb|ABL97637.1| ribonucleotide-diphosphate reductase beta subunit [uncultured
           marine bacterium EB0_39H12]
          Length = 412

 Score =  177 bits (448), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIK+ENPHLW ++ + ++  M+ E T LEI YA +TMP+G +G+
Sbjct: 288 LRDESMHLNFGIDMINQIKLENPHLWDEQMRHEAAQMILEGTELEIQYARDTMPRGILGM 347

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFIANRR  QIGLE  F+   NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 348 NAGMMEEYLQFIANRRLVQIGLEEEFEGASNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 407

Query: 121 ELKWD 125
            L WD
Sbjct: 408 ALTWD 412


>gi|296160506|ref|ZP_06843322.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. Ch1-1]
 gi|295889255|gb|EFG69057.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. Ch1-1]
          Length = 415

 Score =  177 bits (448), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 291 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 351 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L W+
Sbjct: 411 ALTWE 415


>gi|187925407|ref|YP_001897049.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           phytofirmans PsJN]
 gi|187716601|gb|ACD17825.1| Ribonucleoside-diphosphate reductase [Burkholderia phytofirmans
           PsJN]
          Length = 415

 Score =  177 bits (448), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 291 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 351 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L W+
Sbjct: 411 ALTWE 415


>gi|186477386|ref|YP_001858856.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           phymatum STM815]
 gi|184193845|gb|ACC71810.1| Ribonucleoside-diphosphate reductase [Burkholderia phymatum STM815]
          Length = 407

 Score =  177 bits (448), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 283 LRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIREIFKHAVDLEYRYAEDTMPRGVLGL 342

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIG++PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 343 NASMFKSYLRFICNRRCQQIGIDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 402

Query: 121 ELKWD 125
            L W+
Sbjct: 403 ALSWE 407


>gi|74317993|ref|YP_315733.1| ribonucleotide-diphosphate reductase subunit beta [Thiobacillus
           denitrificans ATCC 25259]
 gi|74057488|gb|AAZ97928.1| ribonucleoside-diphosphate reductase beta chain [Thiobacillus
           denitrificans ATCC 25259]
          Length = 376

 Score =  177 bits (448), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK ENPHLWT EF+ + RT++ +   LE  YA +TMP+G +GL
Sbjct: 252 LRDESMHCNFGIDLINTIKQENPHLWTSEFKAEIRTLIQKGVELEFRYAEDTMPRGVLGL 311

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N+   ++Y++FI+NRRC QIGL+ +F    NPFPWM+E+IDLKKEKNFFETRVTEYQ G 
Sbjct: 312 NSAQFKEYLRFISNRRCQQIGLDEMFPGVSNPFPWMAEMIDLKKEKNFFETRVTEYQTGG 371

Query: 121 ELKWD 125
            L WD
Sbjct: 372 ALSWD 376


>gi|148546452|ref|YP_001266554.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           putida F1]
 gi|148510510|gb|ABQ77370.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida F1]
          Length = 415

 Score =  177 bits (448), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW    ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|91785256|ref|YP_560462.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           xenovorans LB400]
 gi|91689210|gb|ABE32410.1| Ribonucleoside-diphosphate reductase [Burkholderia xenovorans
           LB400]
          Length = 411

 Score =  177 bits (448), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 287 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 346

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 347 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 406

Query: 121 ELKWD 125
            L W+
Sbjct: 407 ALTWE 411


>gi|170695324|ref|ZP_02886470.1| Ribonucleoside-diphosphate reductase [Burkholderia graminis C4D1M]
 gi|170139724|gb|EDT07906.1| Ribonucleoside-diphosphate reductase [Burkholderia graminis C4D1M]
          Length = 414

 Score =  177 bits (448), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 290 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 349

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 350 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 409

Query: 121 ELKWD 125
            L W+
Sbjct: 410 ALTWE 414


>gi|330815478|ref|YP_004359183.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           gladioli BSR3]
 gi|327367871|gb|AEA59227.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           gladioli BSR3]
          Length = 407

 Score =  177 bits (448), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 283 LRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIRELFKHAVELEYRYAEDTMPRGVLGL 342

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FIANRRC QIGL+ L+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 343 NASMFKSYLRFIANRRCQQIGLDALYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 402

Query: 121 ELKWD 125
            L W+
Sbjct: 403 ALSWE 407


>gi|254483523|ref|ZP_05096750.1| ribonucleoside-diphosphate reductase, beta subunit [marine gamma
           proteobacterium HTCC2148]
 gi|214036244|gb|EEB76924.1| ribonucleoside-diphosphate reductase, beta subunit [marine gamma
           proteobacterium HTCC2148]
          Length = 425

 Score =  177 bits (448), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENP+LWT+ FQQ+   M+ E T +EI YA +TMP+G +G+
Sbjct: 301 LRDESMHLNFGIDVINQIKLENPNLWTETFQQEVIQMILEGTEIEIQYARDTMPRGVLGM 360

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRR  Q+GL   F   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 361 NAAIMEEYLHFIANRRLSQLGLPEQFAGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 420

Query: 121 ELKWD 125
            L WD
Sbjct: 421 ALSWD 425


>gi|307731037|ref|YP_003908261.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1003]
 gi|307585572|gb|ADN58970.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1003]
          Length = 411

 Score =  176 bits (447), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 287 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 346

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 347 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 406

Query: 121 ELKWD 125
            L W+
Sbjct: 407 ALTWE 411


>gi|146308172|ref|YP_001188637.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           mendocina ymp]
 gi|145576373|gb|ABP85905.1| Ribonucleoside-diphosphate reductase [Pseudomonas mendocina ymp]
          Length = 416

 Score =  176 bits (447), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  + + ++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAQMKDEATQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|104780527|ref|YP_607025.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           entomophila L48]
 gi|95109514|emb|CAK14215.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           entomophila L48]
          Length = 415

 Score =  176 bits (447), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW    ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|330504346|ref|YP_004381215.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           mendocina NK-01]
 gi|328918632|gb|AEB59463.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           mendocina NK-01]
          Length = 416

 Score =  176 bits (447), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  + + ++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAQMKDEATQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|325272776|ref|ZP_08139120.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas sp.
           TJI-51]
 gi|324102083|gb|EGB99585.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas sp.
           TJI-51]
          Length = 416

 Score =  176 bits (447), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW    ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|170720377|ref|YP_001748065.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           putida W619]
 gi|169758380|gb|ACA71696.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida W619]
          Length = 416

 Score =  176 bits (447), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW    ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|327480258|gb|AEA83568.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           stutzeri DSM 4166]
          Length = 415

 Score =  176 bits (447), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLW  E + ++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDMINQIKIENPHLWNAEMKDEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|134095932|ref|YP_001101007.1| ribonucleotide-diphosphate reductase subunit beta [Herminiimonas
           arsenicoxydans]
 gi|133739835|emb|CAL62886.1| Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide
           reductase small subunit) [Herminiimonas arsenicoxydans]
          Length = 395

 Score =  176 bits (447), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK+ENPHLWT +F+ + + +   A  LE  YA +TMP+G +GL
Sbjct: 271 LRDESMHCNFGIDLINTIKLENPHLWTPQFRDEIKALFLRAVELEYRYAEDTMPRGVLGL 330

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRR  QIGLEP+F+  ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 331 NAPMFKGYLRFIANRRAQQIGLEPMFEQEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 390

Query: 121 ELKWD 125
            L W+
Sbjct: 391 ALNWE 395


>gi|323527395|ref|YP_004229548.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1001]
 gi|323384397|gb|ADX56488.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1001]
          Length = 414

 Score =  176 bits (447), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 290 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 349

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 350 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 409

Query: 121 ELKWD 125
            L W+
Sbjct: 410 ALTWE 414


>gi|15596352|ref|NP_249846.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa PAO1]
 gi|107100605|ref|ZP_01364523.1| hypothetical protein PaerPA_01001630 [Pseudomonas aeruginosa PACS2]
 gi|116049087|ref|YP_792111.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|152988648|ref|YP_001349579.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa PA7]
 gi|218892881|ref|YP_002441750.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa LESB58]
 gi|254239525|ref|ZP_04932847.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa 2192]
 gi|296390475|ref|ZP_06879950.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa PAb1]
 gi|313106126|ref|ZP_07792381.1| NrdB, tyrosyl radical-harboring component of class Ia
           ribonucleotide reductase [Pseudomonas aeruginosa 39016]
 gi|9947077|gb|AAG04544.1|AE004545_7 NrdB, tyrosyl radical-harboring component of class Ia
           ribonucleotide reductase [Pseudomonas aeruginosa PAO1]
 gi|115584308|gb|ABJ10323.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126192903|gb|EAZ56966.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa 2192]
 gi|150963806|gb|ABR85831.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa PA7]
 gi|187939552|gb|ACD38699.1| ribonucleoside reductase small chain [Pseudomonas aeruginosa]
 gi|218773109|emb|CAW28921.1| NrdB, tyrosyl radical-harboring component of class Ia
           ribonucleotide reductase [Pseudomonas aeruginosa LESB58]
 gi|310878883|gb|EFQ37477.1| NrdB, tyrosyl radical-harboring component of class Ia
           ribonucleotide reductase [Pseudomonas aeruginosa 39016]
          Length = 415

 Score =  176 bits (446), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  + + ++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAQMKDEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|329902475|ref|ZP_08273120.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327548767|gb|EGF33404.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 416

 Score =  176 bits (446), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID++N IK+ENPHLWT EF+ + + +   A  LE  YA +TMP+G +GL
Sbjct: 292 LRDESMHCNFGIDLVNTIKMENPHLWTPEFRDEIKALFLTAVELEYRYAEDTMPRGVLGL 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRR  QIGLEP+F+  ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 352 NAPMFKGYLRFIANRRAQQIGLEPMFENEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L W+
Sbjct: 412 ALSWE 416


>gi|26987912|ref|NP_743337.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           putida KT2440]
 gi|167035231|ref|YP_001670462.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           putida GB-1]
 gi|24982621|gb|AAN66801.1|AE016309_3 ribonucleoside reductase, beta subunit [Pseudomonas putida KT2440]
 gi|166861719|gb|ABZ00127.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida GB-1]
 gi|313497534|gb|ADR58900.1| NrdB [Pseudomonas putida BIRD-1]
          Length = 416

 Score =  176 bits (446), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW    ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|262373382|ref|ZP_06066661.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           junii SH205]
 gi|262313407|gb|EEY94492.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           junii SH205]
          Length = 427

 Score =  176 bits (446), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|293609145|ref|ZP_06691448.1| ribonucleoside-diphosphate reductase [Acinetobacter sp. SH024]
 gi|292829718|gb|EFF88080.1| ribonucleoside-diphosphate reductase [Acinetobacter sp. SH024]
          Length = 427

 Score =  176 bits (446), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVVQMIVEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|146282010|ref|YP_001172163.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           stutzeri A1501]
 gi|145570215|gb|ABP79321.1| ribonucleoside reductase, small chain [Pseudomonas stutzeri A1501]
          Length = 415

 Score =  176 bits (446), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLW  E + ++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDMINQIKIENPHLWDAEMKDEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NASMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|325121074|gb|ADY80597.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 370

 Score =  176 bits (445), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 247 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVVQMIVEGTMLEIEYARDTMPRGVLGM 306

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 307 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 366

Query: 121 ELKW 124
            L W
Sbjct: 367 ALSW 370


>gi|255318309|ref|ZP_05359544.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           radioresistens SK82]
 gi|262379054|ref|ZP_06072210.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           radioresistens SH164]
 gi|255304621|gb|EET83803.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           radioresistens SK82]
 gi|262298511|gb|EEY86424.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           radioresistens SH164]
          Length = 427

 Score =  176 bits (445), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 98/124 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEIIQMILEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR +Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NAAMMEEYLKFICNRRLNQLGLPEQFAGVNNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|332852155|ref|ZP_08433982.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii 6013150]
 gi|332867554|ref|ZP_08437707.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii 6013113]
 gi|332729527|gb|EGJ60866.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii 6013150]
 gi|332733971|gb|EGJ65116.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii 6013113]
          Length = 440

 Score =  176 bits (445), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 317 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 376

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 377 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 436

Query: 121 ELKW 124
            L W
Sbjct: 437 ALSW 440


>gi|312795100|ref|YP_004028022.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           rhizoxinica HKI 454]
 gi|312166875|emb|CBW73878.1| Ribonucleoside-diphosphate reductase beta chain (EC 1.17.4.1)
           [Burkholderia rhizoxinica HKI 454]
          Length = 416

 Score =  176 bits (445), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT  F+++   +   A  LE  YA +TMP+G +GL
Sbjct: 292 LRDESMHCNFGIDLINQIKLENPHLWTPAFREEICGLFKHAVELEYRYAEDTMPRGVLGL 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGLEPLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 352 NAGMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L W+
Sbjct: 412 ALSWE 416


>gi|332872596|ref|ZP_08440564.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii 6014059]
 gi|332739125|gb|EGJ69984.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii 6014059]
          Length = 440

 Score =  176 bits (445), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 317 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 376

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 377 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 436

Query: 121 ELKW 124
            L W
Sbjct: 437 ALSW 440


>gi|260551040|ref|ZP_05825245.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
           sp. RUH2624]
 gi|260405988|gb|EEW99475.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
           sp. RUH2624]
          Length = 427

 Score =  176 bits (445), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|254429337|ref|ZP_05043044.1| ribonucleoside-diphosphate reductase, beta subunit [Alcanivorax sp.
           DG881]
 gi|196195506|gb|EDX90465.1| ribonucleoside-diphosphate reductase, beta subunit [Alcanivorax sp.
           DG881]
          Length = 355

 Score =  176 bits (445), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIK+ENPHLW  + + K+  M+ E   LEI YA +TMP+G +G+
Sbjct: 231 LRDESMHVNFGIDVINQIKLENPHLWDAQMRDKATQMILEGAELEIQYARDTMPRGVLGM 290

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFIANRR  Q+GL   FK   NPFPWMSE++DL+KEKNFFETRVTEYQ G 
Sbjct: 291 NAAMMEEYLQFIANRRLAQLGLPEQFKGVNNPFPWMSEIMDLRKEKNFFETRVTEYQVGG 350

Query: 121 ELKWD 125
            L W+
Sbjct: 351 ALSWE 355


>gi|169634186|ref|YP_001707922.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii SDF]
 gi|169152978|emb|CAP02026.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii]
          Length = 427

 Score =  175 bits (444), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|126640804|ref|YP_001083788.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii ATCC 17978]
 gi|322506921|gb|ADX02375.1| nrdB [Acinetobacter baumannii 1656-2]
 gi|323516789|gb|ADX91170.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii TCDC-AB0715]
          Length = 361

 Score =  175 bits (444), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 238 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 297

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 298 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 357

Query: 121 ELKW 124
            L W
Sbjct: 358 ALSW 361


>gi|169797064|ref|YP_001714857.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AYE]
 gi|213156529|ref|YP_002318190.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii AB0057]
 gi|215484526|ref|YP_002326761.1| ribonucleotide-diphosphate reductase small chain [Acinetobacter
           baumannii AB307-0294]
 gi|239501302|ref|ZP_04660612.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB900]
 gi|260555643|ref|ZP_05827863.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii ATCC 19606]
 gi|301345633|ref|ZP_07226374.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB056]
 gi|301512780|ref|ZP_07238017.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB058]
 gi|301596291|ref|ZP_07241299.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB059]
 gi|169149991|emb|CAM87885.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii AYE]
 gi|193076530|gb|ABO11186.2| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter
           baumannii ATCC 17978]
 gi|213055689|gb|ACJ40591.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii AB0057]
 gi|213987168|gb|ACJ57467.1| ribonucleotide-diphosphate reductase small chain [Acinetobacter
           baumannii AB307-0294]
 gi|260410554|gb|EEX03852.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii ATCC 19606]
          Length = 427

 Score =  175 bits (444), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|184157022|ref|YP_001845361.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii ACICU]
 gi|183208616|gb|ACC56014.1| Ribonucleotide reductase, beta subunit [Acinetobacter baumannii
           ACICU]
          Length = 427

 Score =  175 bits (444), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|262280153|ref|ZP_06057938.1| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter
           calcoaceticus RUH2202]
 gi|262260504|gb|EEY79237.1| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter
           calcoaceticus RUH2202]
          Length = 427

 Score =  175 bits (443), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 78/124 (62%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLW+ EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWSAEFQQEVVQMIVEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|153208286|ref|ZP_01946665.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii 'MSU Goat Q177']
 gi|165919229|ref|ZP_02219315.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii RSA 334]
 gi|212219268|ref|YP_002306055.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii CbuK_Q154]
 gi|120576070|gb|EAX32694.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii 'MSU Goat Q177']
 gi|165917090|gb|EDR35694.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii RSA 334]
 gi|212013530|gb|ACJ20910.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
           CbuK_Q154]
          Length = 401

 Score =  174 bits (442), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 81/125 (64%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLW K FQ++   M+ E   LE  YA +TMP+G +GL
Sbjct: 276 LRDESMHVNFGIDVINQIKIENPHLWNKNFQKEVIEMILEGVELEYQYAKDTMPRGILGL 335

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+Q+IANRRC QIGL   F   +N FPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 336 NANMFKDYLQYIANRRCAQIGLPEQFPGAKNTFPWMSEMMDLKKEKNFFETRVIEYQAGG 395

Query: 121 ELKWD 125
            LKWD
Sbjct: 396 TLKWD 400


>gi|212212091|ref|YP_002303027.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii CbuG_Q212]
 gi|212010501|gb|ACJ17882.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
           CbuG_Q212]
          Length = 401

 Score =  174 bits (442), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 81/125 (64%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLW K FQ++   M+ E   LE  YA +TMP+G +GL
Sbjct: 276 LRDESMHVNFGIDVINQIKIENPHLWNKNFQKEVIEMILEGVELEYQYAKDTMPRGILGL 335

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+Q+IANRRC QIGL   F   +N FPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 336 NANMFKDYLQYIANRRCAQIGLPEQFPGAKNTFPWMSEMMDLKKEKNFFETRVIEYQAGG 395

Query: 121 ELKWD 125
            LKWD
Sbjct: 396 TLKWD 400


>gi|29654845|ref|NP_820537.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii RSA 493]
 gi|154705923|ref|YP_001423853.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii Dugway 5J108-111]
 gi|161831080|ref|YP_001597389.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii RSA 331]
 gi|29542113|gb|AAO91051.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
           RSA 493]
 gi|154355209|gb|ABS76671.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
           Dugway 5J108-111]
 gi|161762947|gb|ABX78589.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii RSA 331]
          Length = 401

 Score =  174 bits (442), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 81/125 (64%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLW K FQ++   M+ E   LE  YA +TMP+G +GL
Sbjct: 276 LRDESMHVNFGIDVINQIKIENPHLWNKNFQKEVIEMILEGVELEYQYAKDTMPRGILGL 335

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+Q+IANRRC QIGL   F   +N FPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 336 NANMFKDYLQYIANRRCAQIGLPEQFPGAKNTFPWMSEMMDLKKEKNFFETRVIEYQAGG 395

Query: 121 ELKWD 125
            LKWD
Sbjct: 396 TLKWD 400


>gi|50083944|ref|YP_045454.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. ADP1]
 gi|49529920|emb|CAG67632.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           sp. ADP1]
          Length = 427

 Score =  174 bits (442), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 78/124 (62%), Positives = 98/124 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGID+INQIKIENPHLWT EFQQ+   M+ E TLLEI YA +TMP+G +G+
Sbjct: 304 LRDESMHVNFGIDMINQIKIENPHLWTAEFQQEVIQMIVEGTLLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   ++   NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NAAMMEEYLKFICNRRLAQLGLPEQYRGVNNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|299771426|ref|YP_003733452.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. DR1]
 gi|298701514|gb|ADI92079.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. DR1]
          Length = 427

 Score =  174 bits (442), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 78/124 (62%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLW+ EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWSAEFQQEVVQMIVEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|226945386|ref|YP_002800459.1| ribonucleotide-diphosphate reductase subunit beta [Azotobacter
           vinelandii DJ]
 gi|226720313|gb|ACO79484.1| Ribonucleoside-diphosphate reductase beta subunit [Azotobacter
           vinelandii DJ]
          Length = 416

 Score =  174 bits (441), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLW  E + ++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDMINQIKIENPHLWDAEMKDEATQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  Q+GL   +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NATMMEDYLKFIANRRLSQLGLPEQYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|119478322|ref|ZP_01618353.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
           proteobacterium HTCC2143]
 gi|119448662|gb|EAW29907.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
           proteobacterium HTCC2143]
          Length = 422

 Score =  174 bits (441), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 76/125 (60%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENP LW+++FQQ+   M+ E T LEI YA ++MP+G +G+
Sbjct: 298 LRDESMHLNFGIDVINQIKLENPQLWSEKFQQEIIQMILEGTQLEIEYARDSMPRGVLGM 357

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFI+NRR +Q+GL   ++  +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 358 NAAMMEEYLQFISNRRLNQLGLPEQYQGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 417

Query: 121 ELKWD 125
            L W+
Sbjct: 418 ALNWE 422


>gi|88812072|ref|ZP_01127324.1| ribonucleotide-diphosphate reductase beta subunit [Nitrococcus
           mobilis Nb-231]
 gi|88790576|gb|EAR21691.1| ribonucleotide-diphosphate reductase beta subunit [Nitrococcus
           mobilis Nb-231]
          Length = 370

 Score =  174 bits (441), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK ENPHLWT EFQ  ++  + E+  LE+ YA +T+P+G +GL
Sbjct: 246 LRDESIHLNFGIDVINQIKQENPHLWTAEFQATAQRTILESMALEVDYARDTLPRGVLGL 305

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  QIGL   F   ENP PWMSE++DLKKEKNFFETRVTEY+ G 
Sbjct: 306 NAAMIEEYLRFITNRRLAQIGLTEAFPGAENPLPWMSELVDLKKEKNFFETRVTEYRTGG 365

Query: 121 ELKWD 125
            L W+
Sbjct: 366 ALSWE 370


>gi|294339031|emb|CAZ87378.1| putative Ribonucleoside-diphosphate reductase (ribonucleoside
           diphosphate reductase, beta subunit) [Thiomonas sp. 3As]
          Length = 410

 Score =  174 bits (441), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID++NQIK+ENPHLWT EF+++   + H+A  LE  YA +TMP+G +GL
Sbjct: 286 LRDESMHTNFGIDLVNQIKLENPHLWTPEFKRELTGLFHQAVELEYRYAEDTMPRGVLGL 345

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FIANRR  QIGL+ +F   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 346 NASMFKGYLRFIANRRAVQIGLDAIFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 405

Query: 121 ELKWD 125
            L W+
Sbjct: 406 ALSWE 410


>gi|224825450|ref|ZP_03698555.1| Ribonucleoside-diphosphate reductase [Lutiella nitroferrum 2002]
 gi|224602371|gb|EEG08549.1| Ribonucleoside-diphosphate reductase [Lutiella nitroferrum 2002]
          Length = 360

 Score =  174 bits (441), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN +K ENP LWT+EF+ +   +   A  LE AYA +TMP+G +GL
Sbjct: 236 LRDESMHCNFGIDLINTVKQENPQLWTEEFKAEITGLFKHAVELEYAYAEDTMPRGVLGL 295

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   ++Y++FIANRR  QIGLEP+F    NPFPWMSE+IDLKKEKNFFETRVTEYQ G 
Sbjct: 296 NAAMFKEYLRFIANRRMQQIGLEPMFPGVTNPFPWMSEMIDLKKEKNFFETRVTEYQTGG 355

Query: 121 ELKWD 125
            L WD
Sbjct: 356 ALSWD 360


>gi|34497739|ref|NP_901954.1| ribonucleotide-diphosphate reductase subunit beta [Chromobacterium
           violaceum ATCC 12472]
 gi|34103595|gb|AAQ59956.1| ribonucleoside-diphosphate reductase system [Chromobacterium
           violaceum ATCC 12472]
          Length = 360

 Score =  174 bits (440), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK+ENP LWT  F+ +   +  +A  LE AYA +TMP+G +GL
Sbjct: 236 LRDESMHCNFGIDLINTIKLENPLLWTDSFKAEIVDLFKQAVELEYAYAEDTMPRGVLGL 295

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   ++Y++FIANRR  QIGL+PLF    NPFPWMSE+IDLKKEKNFFETRVTEYQ G 
Sbjct: 296 NASMFKEYLRFIANRRMQQIGLDPLFPGVNNPFPWMSEMIDLKKEKNFFETRVTEYQTGG 355

Query: 121 ELKWD 125
            L WD
Sbjct: 356 ALSWD 360


>gi|296135014|ref|YP_003642256.1| Ribonucleoside-diphosphate reductase [Thiomonas intermedia K12]
 gi|295795136|gb|ADG29926.1| Ribonucleoside-diphosphate reductase [Thiomonas intermedia K12]
          Length = 402

 Score =  174 bits (440), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID++NQIK+ENPHLWT EF+++   + H+A  LE  YA +TMP+G +GL
Sbjct: 278 LRDESMHTNFGIDLVNQIKLENPHLWTPEFKRELTGLFHQAVELEYRYAEDTMPRGVLGL 337

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FIANRR  QIGL+ +F   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 338 NASMFKGYLRFIANRRAVQIGLDAIFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 397

Query: 121 ELKWD 125
            L W+
Sbjct: 398 ALSWE 402


>gi|299533977|ref|ZP_07047329.1| ribonucleotide-diphosphate reductase subunit beta [Comamonas
           testosteroni S44]
 gi|298717886|gb|EFI58891.1| ribonucleotide-diphosphate reductase subunit beta [Comamonas
           testosteroni S44]
          Length = 363

 Score =  174 bits (440), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENPHLWT EF+Q+   +  +A  LE  YA +TMP+G +G+
Sbjct: 239 LRDESMHCNFGIDLINQLKLENPHLWTAEFKQEITELFQKAVELEYRYAEDTMPRGVLGM 298

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 299 NASMFKGYLRYIANRRATQIGLEELFPGEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 358

Query: 121 ELKWD 125
            L WD
Sbjct: 359 ALSWD 363


>gi|91787004|ref|YP_547956.1| ribonucleotide-diphosphate reductase subunit beta [Polaromonas sp.
           JS666]
 gi|91696229|gb|ABE43058.1| Ribonucleoside-diphosphate reductase [Polaromonas sp. JS666]
          Length = 406

 Score =  174 bits (440), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENPHLWT EF+ + + +  +A  LE  YA +TMP+G +GL
Sbjct: 282 LRDESMHCNFGIDLINQLKLENPHLWTAEFKAEIKALFLKAVELEYRYAEDTMPRGVLGL 341

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 342 NASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 401

Query: 121 ELKWD 125
            L WD
Sbjct: 402 ALSWD 406


>gi|221065168|ref|ZP_03541273.1| Ribonucleoside-diphosphate reductase [Comamonas testosteroni KF-1]
 gi|220710191|gb|EED65559.1| Ribonucleoside-diphosphate reductase [Comamonas testosteroni KF-1]
          Length = 363

 Score =  173 bits (439), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENPHLWT EF+Q+   +   A  LE  YA +TMP+G +G+
Sbjct: 239 LRDESMHCNFGIDLINQLKLENPHLWTAEFKQEITELFQRAVELEYRYAEDTMPRGVLGM 298

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 299 NASMFKGYLRYIANRRATQIGLEELFPGEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 358

Query: 121 ELKWD 125
            L WD
Sbjct: 359 ALSWD 363


>gi|326315613|ref|YP_004233285.1| ribonucleoside-diphosphate reductase [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323372449|gb|ADX44718.1| Ribonucleoside-diphosphate reductase [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 387

 Score =  173 bits (439), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENPHLWT EF+++ + +  +A  LE  YA +TMP+G +G+
Sbjct: 263 LRDESMHCNFGIDLINQLKLENPHLWTAEFKEEIKGLFMKAVELEYQYAEDTMPRGVLGM 322

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 323 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 382

Query: 121 ELKWD 125
            L WD
Sbjct: 383 ALSWD 387


>gi|313200886|ref|YP_004039544.1| ribonucleoside-diphosphate reductase [Methylovorus sp. MP688]
 gi|312440202|gb|ADQ84308.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. MP688]
          Length = 381

 Score =  173 bits (438), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 75/125 (60%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN +K+ENPHLWT EF+++ + ++ +A  LE  YA +TMP+G +GL
Sbjct: 257 LRDESMHCNFGIDLINTLKLENPHLWTPEFREEIKRLMQQAVELEYRYAEDTMPRGVLGL 316

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   ++Y++FIANRR  QIG++ L+    NPFPWMSE++DLKKEKNFFETRVTEYQ G 
Sbjct: 317 NAAMFKEYLRFIANRRMQQIGIDALYPGASNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 376

Query: 121 ELKWD 125
            L WD
Sbjct: 377 ALSWD 381


>gi|264680215|ref|YP_003280125.1| ribonucleotide reductase [Comamonas testosteroni CNB-2]
 gi|262210731|gb|ACY34829.1| ribonucleotide reductase [Comamonas testosteroni CNB-2]
          Length = 336

 Score =  173 bits (438), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENPHLWT EF+Q+   +  +A  LE  YA +TMP+G +G+
Sbjct: 212 LRDESMHCNFGIDLINQLKLENPHLWTAEFKQEITELFQKAVELEYRYAEDTMPRGVLGM 271

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 272 NASMFKGYLRYIANRRATQIGLEELFPGEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 331

Query: 121 ELKWD 125
            L WD
Sbjct: 332 ALSWD 336


>gi|253998799|ref|YP_003050862.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. SIP3-4]
 gi|253985478|gb|ACT50335.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. SIP3-4]
          Length = 383

 Score =  173 bits (438), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 75/125 (60%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN +K+ENPHLWT EF+++ + ++ +A  LE  YA +TMP+G +GL
Sbjct: 259 LRDESMHCNFGIDLINTLKLENPHLWTPEFREEIKRLMQQAVELEYRYAEDTMPRGVLGL 318

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   ++Y++FIANRR  QIG++ L+    NPFPWMSE++DLKKEKNFFETRVTEYQ G 
Sbjct: 319 NAAMFKEYLRFIANRRMQQIGIDALYPGASNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 378

Query: 121 ELKWD 125
            L WD
Sbjct: 379 ALSWD 383


>gi|120609557|ref|YP_969235.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax
           citrulli AAC00-1]
 gi|120588021|gb|ABM31461.1| Ribonucleoside-diphosphate reductase [Acidovorax citrulli AAC00-1]
          Length = 387

 Score =  173 bits (438), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENPHLWT EF+++ + +  +A  LE  YA +TMP+G +G+
Sbjct: 263 LRDESMHCNFGIDLINQLKLENPHLWTAEFKEEIKGLFMKAVELEYQYAEDTMPRGVLGM 322

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 323 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 382

Query: 121 ELKWD 125
            L WD
Sbjct: 383 ALSWD 387


>gi|121595925|ref|YP_987821.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax sp.
           JS42]
 gi|222112113|ref|YP_002554377.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax
           ebreus TPSY]
 gi|120608005|gb|ABM43745.1| Ribonucleoside-diphosphate reductase [Acidovorax sp. JS42]
 gi|221731557|gb|ACM34377.1| Ribonucleoside-diphosphate reductase [Acidovorax ebreus TPSY]
          Length = 396

 Score =  173 bits (438), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENPHLWT EF+ + + +  +A  LE  YA +TMP+G +G+
Sbjct: 272 LRDESMHCNFGIDLINQLKLENPHLWTAEFKDEIKALFIKAVELEYRYAEDTMPRGVLGM 331

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 332 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 391

Query: 121 ELKWD 125
            L WD
Sbjct: 392 ALSWD 396


>gi|332530699|ref|ZP_08406630.1| ribonucleotide-diphosphate reductase subunit beta [Hylemonella
           gracilis ATCC 19624]
 gi|332039867|gb|EGI76262.1| ribonucleotide-diphosphate reductase subunit beta [Hylemonella
           gracilis ATCC 19624]
          Length = 399

 Score =  173 bits (438), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA +TMP+G +G+
Sbjct: 275 LRDESMHCNFGIDLINQIKLENPQLWTPEFKAEIRGLFEKAVELEYRYAEDTMPRGVLGM 334

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 335 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 394

Query: 121 ELKWD 125
            L WD
Sbjct: 395 ALSWD 399


>gi|255019430|ref|ZP_05291537.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Acidithiobacillus caldus ATCC 51756]
 gi|254971128|gb|EET28583.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Acidithiobacillus caldus ATCC 51756]
          Length = 345

 Score =  172 bits (437), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 75/125 (60%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT+ FQQ+   ++ +   LE AYA +TMP+G +GL
Sbjct: 220 LRDESMHCNFGIDLINQIKLENPQLWTEGFQQEIVGLIRQGVELECAYADDTMPRGILGL 279

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  ++Y+++I NRR  QIGL+P ++  +NPFPWMSE++DLKKEKNFFE+RVT+YQ G 
Sbjct: 280 NAPMFKEYVRYIGNRRLSQIGLKPQWENVQNPFPWMSEMMDLKKEKNFFESRVTDYQTGG 339

Query: 121 ELKWD 125
            L WD
Sbjct: 340 ALSWD 344


>gi|241764092|ref|ZP_04762129.1| Ribonucleoside-diphosphate reductase [Acidovorax delafieldii 2AN]
 gi|241366556|gb|EER61044.1| Ribonucleoside-diphosphate reductase [Acidovorax delafieldii 2AN]
          Length = 398

 Score =  172 bits (437), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENPHLWT EF+ + + +   A  LE  YA +TMP+G +G+
Sbjct: 274 LRDESMHCNFGIDLINQLKLENPHLWTAEFKAEIKALFMRAVELEYRYAEDTMPRGVLGM 333

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 334 NASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 393

Query: 121 ELKWD 125
            L WD
Sbjct: 394 ALSWD 398


>gi|124268397|ref|YP_001022401.1| ribonucleotide-diphosphate reductase subunit beta [Methylibium
           petroleiphilum PM1]
 gi|124261172|gb|ABM96166.1| Ribonucleoside-diphosphate reductase [Methylibium petroleiphilum
           PM1]
          Length = 403

 Score =  172 bits (437), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT EF+ + + +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPQLWTAEFKAEIKALFMKAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKGYLRYIANRRATQIGLEELFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 398

Query: 121 ELKWD 125
            L WD
Sbjct: 399 ALSWD 403


>gi|52842002|ref|YP_095801.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|52629113|gb|AAU27854.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
          Length = 381

 Score =  172 bits (437), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLWT EF+ +   ++ E   LE  YA +TMP G +G+
Sbjct: 255 LRDESMHMNFGIDVINQIKIENPHLWTPEFKNEMIQLIREGVELEYQYARDTMPHGILGM 314

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRR +QIGL   +   ENPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 315 NAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFFETRVIEYQAGG 374

Query: 121 ELKWD 125
            L WD
Sbjct: 375 TLSWD 379


>gi|226953559|ref|ZP_03824023.1| ribonucleotide reductase, beta subunit [Acinetobacter sp. ATCC
           27244]
 gi|294649451|ref|ZP_06726876.1| ribonucleotide-diphosphate reductase beta subunit [Acinetobacter
           haemolyticus ATCC 19194]
 gi|226835696|gb|EEH68079.1| ribonucleotide reductase, beta subunit [Acinetobacter sp. ATCC
           27244]
 gi|292824656|gb|EFF83434.1| ribonucleotide-diphosphate reductase beta subunit [Acinetobacter
           haemolyticus ATCC 19194]
          Length = 427

 Score =  172 bits (436), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 78/124 (62%), Positives = 96/124 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT  FQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTATFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NASMMEEYLKFICNRRLAQLGLPEQFAGVTNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|148359319|ref|YP_001250526.1| ribonucleoside-diphosphate reductase subunit beta [Legionella
           pneumophila str. Corby]
 gi|296107366|ref|YP_003619066.1| ribonucleoside-diphosphate reductase beta chain [Legionella
           pneumophila 2300/99 Alcoy]
 gi|148281092|gb|ABQ55180.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella
           pneumophila str. Corby]
 gi|295649267|gb|ADG25114.1| ribonucleoside-diphosphate reductase beta chain [Legionella
           pneumophila 2300/99 Alcoy]
 gi|307610475|emb|CBX00047.1| hypothetical protein LPW_18021 [Legionella pneumophila 130b]
          Length = 367

 Score =  172 bits (436), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLWT EF+ +   ++ E   LE  YA +TMP G +G+
Sbjct: 241 LRDESMHMNFGIDVINQIKIENPHLWTPEFKNEMIQLIREGVELEYQYARDTMPHGILGM 300

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRR +QIGL   +   ENPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 301 NAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFFETRVIEYQAGG 360

Query: 121 ELKWD 125
            L WD
Sbjct: 361 TLSWD 365


>gi|54294662|ref|YP_127077.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           pneumophila str. Lens]
 gi|53754494|emb|CAH15978.1| hypothetical protein lpl1739 [Legionella pneumophila str. Lens]
          Length = 367

 Score =  172 bits (436), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLWT EF+ +   ++ E   LE  YA +TMP G +G+
Sbjct: 241 LRDESMHMNFGIDVINQIKIENPHLWTPEFKNEIIQLIREGVELEYQYARDTMPHGILGM 300

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRR +QIGL   +   ENPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 301 NAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFFETRVIEYQAGG 360

Query: 121 ELKWD 125
            L WD
Sbjct: 361 TLSWD 365


>gi|54297688|ref|YP_124057.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           pneumophila str. Paris]
 gi|53751473|emb|CAH12891.1| hypothetical protein lpp1739 [Legionella pneumophila str. Paris]
          Length = 367

 Score =  172 bits (436), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLWT EF+ +   ++ E   LE  YA +TMP G +G+
Sbjct: 241 LRDESMHMNFGIDVINQIKIENPHLWTPEFKNEIIQLIREGVELEYQYARDTMPHGILGM 300

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRR +QIGL   +   ENPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 301 NAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFFETRVIEYQAGG 360

Query: 121 ELKWD 125
            L WD
Sbjct: 361 TLSWD 365


>gi|262376783|ref|ZP_06070011.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           lwoffii SH145]
 gi|262308493|gb|EEY89628.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           lwoffii SH145]
          Length = 427

 Score =  172 bits (435), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 78/124 (62%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENP LWT EFQ++   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPGLWTTEFQEEIIQMILEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FIANRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NAGMMEEYLKFIANRRLAQLGLPEQFAGVNNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|145588393|ref|YP_001154990.1| ribonucleotide-diphosphate reductase subunit beta [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145046799|gb|ABP33426.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 394

 Score =  172 bits (435), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 75/125 (60%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT  F+ + +++  +A  LE  YA +TMP+G +GL
Sbjct: 270 LRDESMHCNFGIDLINQIKLENPQLWTSAFKDEIKSIFEKAVELEYRYAEDTMPRGVLGL 329

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y+++I NRRC QIGL+ +F   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 330 NAPMFKGYLRYICNRRCLQIGLDAMFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 389

Query: 121 ELKWD 125
            L W+
Sbjct: 390 ALSWE 394


>gi|158341282|ref|YP_001522354.1| ribonucleotide-diphosphate reductase subunit beta [Acaryochloris
           marina MBIC11017]
 gi|158311523|gb|ABW33134.1| ribonucleoside-diphosphate reductase, beta subunit [Acaryochloris
           marina MBIC11017]
          Length = 384

 Score =  171 bits (434), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 76/125 (60%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID++N IK ENPHLWT EF ++ R +   A  LE  YA +TMP+G +GL
Sbjct: 260 LRDESMHCNFGIDLVNAIKQENPHLWTPEFCEEIRDLFKRAVELEYRYAEDTMPRGVLGL 319

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGL+P+F   ENPFPWMSE++DLKKE+NFFETRV EYQ G 
Sbjct: 320 NASMFKSYLRYIANRRSQQIGLDPIFASEENPFPWMSEMVDLKKERNFFETRVLEYQTGG 379

Query: 121 ELKWD 125
            L WD
Sbjct: 380 ALSWD 384


>gi|254496936|ref|ZP_05109775.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           drancourtii LLAP12]
 gi|254353845|gb|EET12541.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           drancourtii LLAP12]
          Length = 369

 Score =  171 bits (433), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLWT EF+++   ++ +   +E  YA +TMP G +G+
Sbjct: 240 LRDESMHMNFGIDVINQIKIENPHLWTPEFKEEIIQLIKDGVAMEYQYAKDTMPHGILGM 299

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRR +QIGL   +   ENPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 300 NAEMFEEYLHFIANRRLNQIGLPEQYPGAENPFPWMSEMMDLKKEKNFFETRVIEYQAGG 359

Query: 121 ELKWD 125
            L WD
Sbjct: 360 TLSWD 364


>gi|89902117|ref|YP_524588.1| ribonucleotide-diphosphate reductase subunit beta [Rhodoferax
           ferrireducens T118]
 gi|89346854|gb|ABD71057.1| Ribonucleoside-diphosphate reductase [Rhodoferax ferrireducens
           T118]
          Length = 400

 Score =  171 bits (433), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 76/125 (60%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENP LWT EF+ + + +  +A  LE  YA +TMP+G +G+
Sbjct: 276 LRDESMHCNFGIDLINQLKLENPQLWTSEFKAEIKALFEQAVELEYRYAEDTMPRGVLGM 335

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 336 NASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 395

Query: 121 ELKWD 125
            L WD
Sbjct: 396 ALSWD 400


>gi|332526550|ref|ZP_08402662.1| ribonucleotide-diphosphate reductase subunit beta [Rubrivivax
           benzoatilyticus JA2]
 gi|332110818|gb|EGJ10995.1| ribonucleotide-diphosphate reductase subunit beta [Rubrivivax
           benzoatilyticus JA2]
          Length = 385

 Score =  170 bits (431), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 76/125 (60%), Positives = 94/125 (75%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT  F+ + R +   A  LE  YA +TMP+G +G+
Sbjct: 261 LRDESMHCNFGIDLINQIKLENPQLWTPAFKAEIRALFERAVELEYRYAEDTMPRGVLGM 320

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV +YQ G 
Sbjct: 321 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIDYQSGG 380

Query: 121 ELKWD 125
            L WD
Sbjct: 381 ALSWD 385


>gi|262369327|ref|ZP_06062655.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
           johnsonii SH046]
 gi|262315395|gb|EEY96434.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
           johnsonii SH046]
          Length = 427

 Score =  170 bits (431), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 77/124 (62%), Positives = 96/124 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENP LWT EFQ++   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPSLWTAEFQEEIIQMILEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NAAMMEEYLKFICNRRLAQLGLPEQFAGVNNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|121606275|ref|YP_983604.1| ribonucleotide-diphosphate reductase subunit beta [Polaromonas
           naphthalenivorans CJ2]
 gi|120595244|gb|ABM38683.1| Ribonucleoside-diphosphate reductase [Polaromonas naphthalenivorans
           CJ2]
          Length = 387

 Score =  170 bits (431), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENP LWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 263 LRDESMHCNFGIDLINQLKLENPQLWTAEFKAEINALFMKAVELEYRYAEDTMPRGVLGL 322

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 323 NASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 382

Query: 121 ELKWD 125
            L WD
Sbjct: 383 ALSWD 387


>gi|270156779|ref|ZP_06185436.1| ribonucleotide-diphosphate reductase beta subunit [Legionella
           longbeachae D-4968]
 gi|289164772|ref|YP_003454910.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella
           longbeachae NSW150]
 gi|269988804|gb|EEZ95058.1| ribonucleotide-diphosphate reductase beta subunit [Legionella
           longbeachae D-4968]
 gi|288857945|emb|CBJ11805.1| putative ribonucleoside-diphosphate reductase, beta subunit
           [Legionella longbeachae NSW150]
          Length = 366

 Score =  170 bits (430), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLWT EF+++   ++ +   LE  YA +TMP+G +G+
Sbjct: 240 LRDESMHMNFGIDVINQIKIENPHLWTSEFKEEIIQLIRQGVDLEYQYAKDTMPQGILGM 299

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRR  QIGL   +    NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 300 NAEMFEEYLHFIANRRLTQIGLAEQYPGAVNPFPWMSEMMDLKKEKNFFETRVIEYQAGG 359

Query: 121 ELKWD 125
            L WD
Sbjct: 360 TLSWD 364


>gi|239813962|ref|YP_002942872.1| ribonucleotide-diphosphate reductase subunit beta [Variovorax
           paradoxus S110]
 gi|239800539|gb|ACS17606.1| Ribonucleoside-diphosphate reductase [Variovorax paradoxus S110]
          Length = 391

 Score =  170 bits (430), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 76/125 (60%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENP LWT EF+ + + +  +A  LE  YA +TMP+G +G+
Sbjct: 267 LRDESMHCNFGIDLINQLKLENPGLWTPEFKAEIKALFLKAVELEYKYAEDTMPRGVLGM 326

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 327 NASMFKGYLRYIANRRAQQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 386

Query: 121 ELKWD 125
            L WD
Sbjct: 387 ALSWD 391


>gi|171057074|ref|YP_001789423.1| ribonucleotide-diphosphate reductase subunit beta [Leptothrix
           cholodnii SP-6]
 gi|170774519|gb|ACB32658.1| Ribonucleoside-diphosphate reductase [Leptothrix cholodnii SP-6]
          Length = 402

 Score =  169 bits (429), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK+ENPHLWT  F+ + + +  +A  LE  YA +TMP+G +GL
Sbjct: 278 LRDESMHCNFGIDLINAIKLENPHLWTPAFKAEIKALFLKAVELEYRYAEDTMPRGVLGL 337

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 338 NASMFKGYLRYIANRRATQIGLEELFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 397

Query: 121 ELKWD 125
            L WD
Sbjct: 398 ALSWD 402


>gi|319791701|ref|YP_004153341.1| ribonucleoside-diphosphate reductase [Variovorax paradoxus EPS]
 gi|315594164|gb|ADU35230.1| Ribonucleoside-diphosphate reductase [Variovorax paradoxus EPS]
          Length = 411

 Score =  169 bits (429), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 76/125 (60%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENP LWT EF+ + + +   A  LE  YA +TMP+G +G+
Sbjct: 287 LRDESMHCNFGIDLINQLKLENPGLWTPEFKAEIKDLFMRAVELEYKYAEDTMPRGVLGM 346

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 347 NASMFKGYLRYIANRRAQQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 406

Query: 121 ELKWD 125
            L WD
Sbjct: 407 ALSWD 411


>gi|160896947|ref|YP_001562529.1| ribonucleotide-diphosphate reductase subunit beta [Delftia
           acidovorans SPH-1]
 gi|160362531|gb|ABX34144.1| Ribonucleoside-diphosphate reductase [Delftia acidovorans SPH-1]
          Length = 363

 Score =  169 bits (428), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 76/125 (60%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENP LWT EF+++   +  +A  LE  YA +TMP+G +G+
Sbjct: 239 LRDESMHCNFGIDLINQLKLENPQLWTPEFKEEITALFVKAVELEYRYAEDTMPRGVLGM 298

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 299 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 358

Query: 121 ELKWD 125
            L WD
Sbjct: 359 ALSWD 363


>gi|160871658|ref|ZP_02061790.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsiella
           grylli]
 gi|159120457|gb|EDP45795.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsiella
           grylli]
          Length = 362

 Score =  167 bits (422), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 92/125 (73%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENPHLWT EF++    ++ E   LE  YA +T+P+G +GL
Sbjct: 237 LRDESMHLNFGIDVINQIKLENPHLWTPEFKRYVINLIKEGVDLEYQYALDTLPRGILGL 296

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA     Y++FI NRR  QIGL   +    NP PWMSE+IDLKKEKNFFETRVTEYQ G 
Sbjct: 297 NANLMWDYLRFIGNRRFTQIGLAEQYPGVSNPLPWMSEIIDLKKEKNFFETRVTEYQTGG 356

Query: 121 ELKWD 125
            L WD
Sbjct: 357 SLNWD 361


>gi|255019898|ref|ZP_05291973.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Acidithiobacillus caldus ATCC 51756]
 gi|254970678|gb|EET28165.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Acidithiobacillus caldus ATCC 51756]
          Length = 374

 Score =  167 bits (422), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 74/125 (59%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT+ FQ++  +++ +   LE AYA +TMP+G +GL
Sbjct: 250 LRDESMHCNFGIDLINQIKVENPDLWTEPFQEEIVSLIRKGVELECAYADDTMPRGVLGL 309

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y+++I NRR  Q+GL   +   +NPFPWMSE++DLKKEKNFFETRVTEYQ G 
Sbjct: 310 NAPIFKDYVKYIGNRRLQQLGLPVQWAGIQNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 369

Query: 121 ELKWD 125
            L WD
Sbjct: 370 ALSWD 374


>gi|171463021|ref|YP_001797134.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171192559|gb|ACB43520.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 394

 Score =  166 bits (421), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 73/125 (58%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LW   F+ + +++  +A  LE  YA +TMP+G +GL
Sbjct: 270 LRDESMHCNFGIDLINQIKLENPQLWISAFKDEIKSIFEKAVELEYRYAEDTMPRGVLGL 329

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  +  +++I NRRC QIGL+ +F   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 330 NAPMFKGCLRYICNRRCLQIGLDAMFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 389

Query: 121 ELKWD 125
            L W+
Sbjct: 390 ALSWE 394


>gi|319764328|ref|YP_004128265.1| ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
           BC]
 gi|330826374|ref|YP_004389677.1| ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
           K601]
 gi|317118889|gb|ADV01378.1| Ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
           BC]
 gi|329311746|gb|AEB86161.1| Ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
           K601]
          Length = 396

 Score =  166 bits (420), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 74/125 (59%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENP LWT  F+ + + +  +A  LE  YA +TMP+G +G+
Sbjct: 272 LRDESMHCNFGIDLINQLKLENPQLWTPAFKDEIKGLFLKAVDLEYRYAEDTMPRGVLGM 331

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGL+ LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 332 NASMFKGYLRYIANRRATQIGLDALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 391

Query: 121 ELKWD 125
            L WD
Sbjct: 392 ALSWD 396


>gi|268316001|ref|YP_003289720.1| Ribonucleoside-diphosphate reductase [Rhodothermus marinus DSM
           4252]
 gi|262333535|gb|ACY47332.1| Ribonucleoside-diphosphate reductase [Rhodothermus marinus DSM
           4252]
          Length = 347

 Score =  166 bits (419), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 75/125 (60%), Positives = 99/125 (79%), Gaps = 1/125 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP LWT EFQ++ + ++ EA  LE+AYA++ +P+G +GL
Sbjct: 223 LRDETIHLNFGIDLINGIKAENPELWTPEFQREVQQLIEEAVELEVAYAYDCLPRGVLGL 282

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            AP   +Y+Q+IA+RR  +IGL+  +  ++NPFPWMSE IDL KEKNFFETRVTEYQQ A
Sbjct: 283 TAPMFREYVQYIADRRLERIGLKARYG-SKNPFPWMSETIDLLKEKNFFETRVTEYQQAA 341

Query: 121 ELKWD 125
            L WD
Sbjct: 342 ALSWD 346


>gi|149927167|ref|ZP_01915424.1| ribonucleotide-diphosphate reductase beta subunit [Limnobacter sp.
           MED105]
 gi|149824106|gb|EDM83327.1| ribonucleotide-diphosphate reductase beta subunit [Limnobacter sp.
           MED105]
          Length = 399

 Score =  165 bits (418), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 74/125 (59%), Positives = 94/125 (75%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES H  FGID+IN +K+ENPHLWT EF+++ + M  +A  LE AYA +TMP+G +GL
Sbjct: 275 LRDESAHCTFGIDLINTVKLENPHLWTPEFKEEIKAMFRKAVELEHAYAVDTMPRGVLGL 334

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N+    +YM+FI NRR +QIGL  L++   NPFPWMSE++DLKKE NFFE RVTEYQ G 
Sbjct: 335 NSAQFMEYMKFICNRRSNQIGLGTLYEGATNPFPWMSEMMDLKKETNFFERRVTEYQTGG 394

Query: 121 ELKWD 125
            L WD
Sbjct: 395 ALSWD 399


>gi|198284354|ref|YP_002220675.1| ribonucleotide-diphosphate reductase subunit beta
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|198248875|gb|ACH84468.1| Ribonucleoside-diphosphate reductase [Acidithiobacillus
           ferrooxidans ATCC 53993]
          Length = 374

 Score =  164 bits (415), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 73/125 (58%), Positives = 94/125 (75%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+ NQIK+ENP LWT+ FQQ+   ++     LE AYA +TMP+G +GL
Sbjct: 250 LRDESMHCNFGIDMANQIKVENPQLWTEAFQQEIIDLIRRGVELECAYADDTMPRGVLGL 309

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP   +Y+++I NRR  Q+GL   +   +NPFPWMSE++DLKKEKNFFETRVTEYQ G 
Sbjct: 310 NAPVFREYVKYIGNRRLVQLGLPQQYPGVQNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 369

Query: 121 ELKWD 125
            L W+
Sbjct: 370 ALSWE 374


>gi|218665361|ref|YP_002427016.1| ribonucleoside-diphosphate reductase, beta subunit
           [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|218517574|gb|ACK78160.1| ribonucleoside-diphosphate reductase, beta subunit
           [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 380

 Score =  164 bits (415), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 73/125 (58%), Positives = 94/125 (75%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+ NQIK+ENP LWT+ FQQ+   ++     LE AYA +TMP+G +GL
Sbjct: 256 LRDESMHCNFGIDMANQIKVENPQLWTEAFQQEIIDLIRRGVELECAYADDTMPRGVLGL 315

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP   +Y+++I NRR  Q+GL   +   +NPFPWMSE++DLKKEKNFFETRVTEYQ G 
Sbjct: 316 NAPVFREYVKYIGNRRLVQLGLPQQYPGVQNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 375

Query: 121 ELKWD 125
            L W+
Sbjct: 376 ALSWE 380


>gi|121608466|ref|YP_996273.1| ribonucleotide-diphosphate reductase subunit beta
           [Verminephrobacter eiseniae EF01-2]
 gi|121553106|gb|ABM57255.1| Ribonucleoside-diphosphate reductase [Verminephrobacter eiseniae
           EF01-2]
          Length = 399

 Score =  163 bits (412), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 75/125 (60%), Positives = 92/125 (73%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT  F+ +   +  +A  LE  YA +TMP G +G+
Sbjct: 275 LRDESMHCNFGIDLINQIKLENPLLWTTAFKAEIEALFLQAVELEYRYAEDTMPHGVLGM 334

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF    NPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 335 NASMFKGYLRYIANRRATQIGLETLFPQETNPFPWMSEMIDLKKERNFFETRVIEYQSGG 394

Query: 121 ELKWD 125
            L WD
Sbjct: 395 ALCWD 399


>gi|298243909|ref|ZP_06967716.1| Ribonucleoside-diphosphate reductase [Ktedonobacter racemifer DSM
           44963]
 gi|297556963|gb|EFH90827.1| Ribonucleoside-diphosphate reductase [Ktedonobacter racemifer DSM
           44963]
          Length = 361

 Score =  157 bits (398), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 72/125 (57%), Positives = 94/125 (75%), Gaps = 1/125 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP LWT EFQ     ++  A  LEIAYA++ +P G +GL
Sbjct: 238 LRDETIHLNFGIDLINGIKAENPELWTTEFQAHIYDLIKRAVELEIAYAYDCLPNGILGL 297

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA S   Y+Q +A+RR  +IGL P+F ++ +PFPWMSE +DL KEKNFFETRVTEYQ  +
Sbjct: 298 NAESFRSYVQHVADRRLERIGLAPIF-HSSHPFPWMSETMDLSKEKNFFETRVTEYQAAS 356

Query: 121 ELKWD 125
            L+W+
Sbjct: 357 TLEWE 361


>gi|282890382|ref|ZP_06298910.1| hypothetical protein pah_c016o114 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499764|gb|EFB42055.1| hypothetical protein pah_c016o114 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 350

 Score =  156 bits (394), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 74/124 (59%), Positives = 92/124 (74%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+IN IK ENP +WT EF+ +   M+ EA  LEI YA + +P G +GL
Sbjct: 228 LRDESIHLNFGIDLINTIKEENPEVWTPEFKDQIIDMVKEAVELEIQYAADCLPNGILGL 287

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA     Y+ +IA+RR  +IGL+P +  T NPFPWMSEV+DL KEKNFFETRVT+YQ GA
Sbjct: 288 NAALFRDYVGYIADRRLERIGLKPQYN-TANPFPWMSEVMDLDKEKNFFETRVTQYQSGA 346

Query: 121 ELKW 124
            L W
Sbjct: 347 ALVW 350


>gi|15834835|ref|NP_296594.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           muridarum Nigg]
 gi|270285001|ref|ZP_06194395.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           muridarum Nigg]
 gi|270289024|ref|ZP_06195326.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           muridarum Weiss]
 gi|301336399|ref|ZP_07224601.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           muridarum MopnTet14]
 gi|14195147|sp|Q9PL92|RIR2_CHLMU RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|7190253|gb|AAF39087.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydia
           muridarum Nigg]
          Length = 346

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 72/124 (58%), Positives = 92/124 (74%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFG+D+IN IK ENP +WT E QQ+   M+  A  LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGVDLINGIKEENPEIWTTELQQEIIEMIQRAVDLEIDYARDCLPRGILGL 283

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A     Y+Q IA+RR  +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRVTEYQ  A
Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVTEYQHAA 342

Query: 121 ELKW 124
            L W
Sbjct: 343 SLTW 346


>gi|166154172|ref|YP_001654290.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 434/Bu]
 gi|166155047|ref|YP_001653302.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis L2b/UCH-1/proctitis]
 gi|301335416|ref|ZP_07223660.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis L2tet1]
 gi|165930160|emb|CAP03644.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis 434/Bu]
 gi|165931035|emb|CAP06598.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis L2b/UCH-1/proctitis]
          Length = 346

 Score =  154 bits (388), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 72/124 (58%), Positives = 92/124 (74%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +WT E QQ+   ++  A  LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGL 283

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A     Y+Q IA+RR  +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRVTEYQ  A
Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVTEYQHAA 342

Query: 121 ELKW 124
            L W
Sbjct: 343 SLTW 346


>gi|297621807|ref|YP_003709944.1| ribonucleoside-diphosphate reductase beta subunit [Waddlia
           chondrophila WSU 86-1044]
 gi|297377108|gb|ADI38938.1| ribonucleoside-diphosphate reductase beta subunit [Waddlia
           chondrophila WSU 86-1044]
          Length = 344

 Score =  153 bits (387), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 69/125 (55%), Positives = 92/125 (73%), Gaps = 1/125 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +W ++   +   ++ +A  LEIAYA E +P G +GL
Sbjct: 221 LRDETIHLNFGIDLINGIKAENPEIWNEDLTDEINGLVQQAVELEIAYAKECLPHGVLGL 280

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    +Y+Q++A+RR  +IGL  ++K + NPFPWMSE +DL KEKNFFETRVTEYQ  A
Sbjct: 281 NAGLFVEYVQYVADRRLERIGLSAIYK-SSNPFPWMSETMDLTKEKNFFETRVTEYQSAA 339

Query: 121 ELKWD 125
            L WD
Sbjct: 340 VLSWD 344


>gi|325110864|ref|YP_004271932.1| ribonucleotide reductase [Planctomyces brasiliensis DSM 5305]
 gi|324971132|gb|ADY61910.1| ribonucleotide reductase [Planctomyces brasiliensis DSM 5305]
          Length = 353

 Score =  153 bits (386), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 72/125 (57%), Positives = 91/125 (72%), Gaps = 1/125 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE+ HLNFGID+IN IK ENP +WT++FQQ+   ++ EA  LEI YA + +P+G +GL
Sbjct: 230 LRDETTHLNFGIDLINGIKHENPDIWTEKFQQEIIDLVKEAVELEIDYARDCLPRGVLGL 289

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N      Y+Q IA+RR  +IGL  L+  + NPFPWMSE +DL KEKNFFETRVTEYQ G 
Sbjct: 290 NGNLFRDYVQHIADRRLERIGLPTLYN-SSNPFPWMSETMDLAKEKNFFETRVTEYQTGG 348

Query: 121 ELKWD 125
            L WD
Sbjct: 349 TLSWD 353


>gi|283779060|ref|YP_003369815.1| ribonucleoside-diphosphate reductase [Pirellula staleyi DSM 6068]
 gi|283437513|gb|ADB15955.1| Ribonucleoside-diphosphate reductase [Pirellula staleyi DSM 6068]
          Length = 357

 Score =  153 bits (386), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 70/125 (56%), Positives = 91/125 (72%), Gaps = 1/125 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN ++ ENP +WT +FQ++   ++ EA  LE+AYA + +P+G VGL
Sbjct: 234 LRDETIHLNFGIDLINGVRAENPGIWTADFQERVIKLVREAVELEVAYAWDCLPRGIVGL 293

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N      Y+Q IA+RR  +IGL P    + NPFPWMSE +DL KEKNFFETRVTEYQ  A
Sbjct: 294 NGELFRDYVQHIADRRLERIGL-PTQYGSANPFPWMSETMDLGKEKNFFETRVTEYQSAA 352

Query: 121 ELKWD 125
            L WD
Sbjct: 353 SLAWD 357


>gi|159899093|ref|YP_001545340.1| ribonucleotide-diphosphate reductase subunit beta [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159892132|gb|ABX05212.1| Ribonucleoside-diphosphate reductase [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 342

 Score =  152 bits (383), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 69/125 (55%), Positives = 92/125 (73%), Gaps = 1/125 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFG+D+IN IK ENP +WT EFQ +   ++ ++  LE  YA E +P+G +GL
Sbjct: 219 LRDETIHLNFGVDLINGIKAENPAIWTNEFQAEIVQLIRQSVELEAQYAAECLPRGVMGL 278

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A     Y+Q+IA+RR  +IGL   +  ++NPFPWMSE IDL KEKNFFETRVTEYQ  A
Sbjct: 279 HAAMFRDYVQYIADRRLQRIGLAIQYG-SQNPFPWMSETIDLTKEKNFFETRVTEYQSAA 337

Query: 121 ELKWD 125
            L+WD
Sbjct: 338 SLEWD 342


>gi|112489977|pdb|2ANI|A Chain A, Crystal Structure Of The F127y Mutant Of Ribonucleotide
           Reductase R2 From Chlamydia Trachomatis
          Length = 346

 Score =  152 bits (383), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 71/124 (57%), Positives = 91/124 (73%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +WT E QQ+   ++  A  LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGL 283

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A     Y+Q IA+RR  +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRV EYQ  A
Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVIEYQHAA 342

Query: 121 ELKW 124
            L W
Sbjct: 343 SLTW 346


>gi|15605563|ref|NP_220349.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis D/UW-3/CX]
 gi|255311668|ref|ZP_05354238.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 6276]
 gi|255317969|ref|ZP_05359215.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 6276s]
 gi|14195107|sp|O84835|RIR2_CHLTR RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|51247460|pdb|1SYY|A Chain A, Crystal Structure Of The R2 Subunit Of Ribonucleotide
           Reductase From Chlamydia Trachomatis
 gi|3329298|gb|AAC68425.1| Ribonucleoside Reductase, Small Chain [Chlamydia trachomatis
           D/UW-3/CX]
 gi|296436383|gb|ADH18557.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis G/9768]
 gi|296437314|gb|ADH19484.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis G/11222]
 gi|296438242|gb|ADH20403.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis G/11074]
 gi|297140743|gb|ADH97501.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis G/9301]
 gi|297748957|gb|ADI51503.1| Ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis D-EC]
 gi|297749837|gb|ADI52515.1| Ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis D-LC]
          Length = 346

 Score =  152 bits (383), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 71/124 (57%), Positives = 91/124 (73%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +WT E QQ+   ++  A  LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGL 283

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A     Y+Q IA+RR  +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRV EYQ  A
Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVIEYQHAA 342

Query: 121 ELKW 124
            L W
Sbjct: 343 SLTW 346


>gi|76789573|ref|YP_328659.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis A/HAR-13]
 gi|237803260|ref|YP_002888454.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis B/Jali20/OT]
 gi|237805181|ref|YP_002889335.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis B/TZ1A828/OT]
 gi|255349232|ref|ZP_05381239.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 70]
 gi|255503769|ref|ZP_05382159.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 70s]
 gi|255507450|ref|ZP_05383089.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis D(s)2923]
 gi|76168103|gb|AAX51111.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis A/HAR-13]
 gi|231273481|emb|CAX10397.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis B/TZ1A828/OT]
 gi|231274494|emb|CAX11290.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis B/Jali20/OT]
 gi|289525874|emb|CBJ15356.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis Sweden2]
 gi|296435459|gb|ADH17637.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis E/150]
 gi|296439176|gb|ADH21329.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis E/11023]
          Length = 346

 Score =  151 bits (382), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 71/124 (57%), Positives = 91/124 (73%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +WT E QQ+   ++  A  LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPGIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGL 283

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A     Y+Q IA+RR  +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRV EYQ  A
Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVIEYQHAA 342

Query: 121 ELKW 124
            L W
Sbjct: 343 SLTW 346


>gi|189219089|ref|YP_001939730.1| ribonucleotide-diphosphate reductase subunit beta
           [Methylacidiphilum infernorum V4]
 gi|189185947|gb|ACD83132.1| Ribonucleotide reductase, beta subunit [Methylacidiphilum
           infernorum V4]
          Length = 361

 Score =  151 bits (382), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 68/124 (54%), Positives = 94/124 (75%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN I+ ENP +WT  FQ++   M+ E+  LE AYA + +P+G +GL
Sbjct: 239 LRDETIHLNFGIDLINGIREENPEIWTAGFQKEIEEMIDESVRLEYAYARDCLPRGILGL 298

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N+   + Y+++IA+RR  +IG +  +  ++NPFPWMSEV+DL KEKNFFETRVTEYQ GA
Sbjct: 299 NSALFKDYVEYIADRRLERIGFKAKYG-SKNPFPWMSEVMDLVKEKNFFETRVTEYQSGA 357

Query: 121 ELKW 124
            L W
Sbjct: 358 VLNW 361


>gi|330443801|ref|YP_004376787.1| ribonucleoside-diphosphate reductase subunit beta [Chlamydophila
           pecorum E58]
 gi|328806911|gb|AEB41084.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           pecorum E58]
          Length = 346

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 68/124 (54%), Positives = 92/124 (74%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +W+KE Q++   ++  A  LEI YA + +PKG +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEVWSKELQEEIIALIETAVGLEIDYAKDCLPKGILGL 283

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            +     Y++ IA+RR  +IGL+P++  ++NPFPWMSE +DL KEKNFFETRVTEYQ  A
Sbjct: 284 KSSMFIDYVRHIADRRLERIGLKPIYN-SKNPFPWMSETMDLNKEKNFFETRVTEYQTAA 342

Query: 121 ELKW 124
            L W
Sbjct: 343 SLSW 346


>gi|29840533|ref|NP_829639.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           caviae GPIC]
 gi|29834882|gb|AAP05517.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           caviae GPIC]
          Length = 346

 Score =  149 bits (376), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 67/124 (54%), Positives = 92/124 (74%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +W++E Q +   ++ +A  LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEVWSQELQDEIIALIQKAVDLEIEYAKDCLPRGILGL 283

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            +     Y++ IA+RR  +IGL+P++ Y++NPFPWMSE IDL KEKNFFETRVTEYQ   
Sbjct: 284 KSSMFIDYVRHIADRRLERIGLKPIY-YSKNPFPWMSETIDLNKEKNFFETRVTEYQTSG 342

Query: 121 ELKW 124
            L W
Sbjct: 343 NLSW 346


>gi|62185356|ref|YP_220141.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           abortus S26/3]
 gi|62148423|emb|CAH64191.1| putative ibonucleoside reductase small subunit [Chlamydophila
           abortus S26/3]
          Length = 349

 Score =  148 bits (373), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 68/124 (54%), Positives = 91/124 (73%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +WT E Q +   ++ +A  LEI YA + +P+G +GL
Sbjct: 227 LRDETIHLNFGIDLINGIKEENPEVWTPELQSEIIALIEKAVDLEIEYARDCLPRGILGL 286

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A     Y++ IA+RR  +IGL+P++ +++NPFPWMSE IDL KEKNFFETRV EYQ  A
Sbjct: 287 KASMFIDYVRHIADRRLERIGLKPIY-HSKNPFPWMSETIDLNKEKNFFETRVIEYQTAA 345

Query: 121 ELKW 124
            L W
Sbjct: 346 NLSW 349


>gi|313848275|emb|CBY17276.1| putative ibonucleoside reductase small subunit [Chlamydophila
           psittaci RD1]
          Length = 349

 Score =  148 bits (373), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 68/124 (54%), Positives = 91/124 (73%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +WT E Q +   ++ +A  LEI YA + +P+G +GL
Sbjct: 227 LRDETIHLNFGIDLINGIKEENPEVWTPELQSEIIALIEKAVDLEIEYARDCLPRGILGL 286

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A     Y++ IA+RR  +IGL+P++ +++NPFPWMSE IDL KEKNFFETRV EYQ  A
Sbjct: 287 KASMFIDYVRHIADRRLERIGLKPIY-HSKNPFPWMSETIDLNKEKNFFETRVIEYQTAA 345

Query: 121 ELKW 124
            L W
Sbjct: 346 NLSW 349


>gi|329943118|ref|ZP_08291892.1| ribonucleotide reductase, small chain family protein [Chlamydophila
           psittaci Cal10]
 gi|332287701|ref|YP_004422602.1| ribonucleotide reductase subunit beta [Chlamydophila psittaci 6BC]
 gi|325507260|gb|ADZ18898.1| ribonucleotide reductase subunit beta [Chlamydophila psittaci 6BC]
 gi|328814665|gb|EGF84655.1| ribonucleotide reductase, small chain family protein [Chlamydophila
           psittaci Cal10]
 gi|328914953|gb|AEB55786.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           psittaci 6BC]
          Length = 346

 Score =  147 bits (372), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 68/124 (54%), Positives = 91/124 (73%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +WT E Q +   ++ +A  LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEVWTPELQSEIIALIEKAVDLEIEYARDCLPRGILGL 283

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A     Y++ IA+RR  +IGL+P++ +++NPFPWMSE IDL KEKNFFETRV EYQ  A
Sbjct: 284 KASMFIDYVRHIADRRLERIGLKPIY-HSKNPFPWMSETIDLNKEKNFFETRVIEYQTAA 342

Query: 121 ELKW 124
            L W
Sbjct: 343 NLSW 346


>gi|330941350|gb|EGH44202.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 109

 Score =  147 bits (370), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 66/109 (60%), Positives = 82/109 (75%)

Query: 17  QIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRR 76
           QIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+NA   E Y++FIANRR
Sbjct: 1   QIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRR 60

Query: 77  CHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAELKWD 125
             QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G  L WD
Sbjct: 61  LSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGGALSWD 109


>gi|89898045|ref|YP_515155.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           felis Fe/C-56]
 gi|89331417|dbj|BAE81010.1| ribonucleoside-diphosphate reductase beta chain [Chlamydophila
           felis Fe/C-56]
          Length = 349

 Score =  147 bits (370), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 66/124 (53%), Positives = 92/124 (74%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +W+++ Q +   ++ +A  LEI YA + +P+G +GL
Sbjct: 227 LRDETIHLNFGIDLINGIKEENPEVWSQQLQDEIVDLIQKAVDLEIEYARDCLPRGILGL 286

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            +     Y++ IA+RR  +IGL+P++  ++NPFPWMSE IDL KEKNFFETRVTEYQ  A
Sbjct: 287 RSSMFIDYVRHIADRRLERIGLKPIYN-SKNPFPWMSETIDLNKEKNFFETRVTEYQTAA 345

Query: 121 ELKW 124
            L W
Sbjct: 346 NLNW 349


>gi|33242353|ref|NP_877294.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           pneumoniae TW-183]
 gi|33236864|gb|AAP98951.1| ribonucleoside reductase small chain [Chlamydophila pneumoniae
           TW-183]
          Length = 365

 Score =  147 bits (370), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 66/124 (53%), Positives = 91/124 (73%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +WT E Q++   ++ +A  LEI YA + +P+G +GL
Sbjct: 243 LRDETIHLNFGIDLINGIKEENPEVWTTELQEEIVALIEKAVELEIEYAKDCLPRGILGL 302

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            +     Y++ IA+RR  +IGL+P++ ++ NPFPWMSE +DL KEKNFFETRVTEYQ   
Sbjct: 303 RSSMFIDYVRHIADRRLERIGLKPIY-HSRNPFPWMSETMDLNKEKNFFETRVTEYQTAG 361

Query: 121 ELKW 124
            L W
Sbjct: 362 NLSW 365


>gi|15618893|ref|NP_225179.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           pneumoniae CWL029]
 gi|15836516|ref|NP_301040.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           pneumoniae J138]
 gi|16752043|ref|NP_445409.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           pneumoniae AR39]
 gi|14195165|sp|Q9Z6S4|RIR2_CHLPN RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|4377313|gb|AAD19122.1| Ribonucleoside Reductase, Small Chain [Chlamydophila pneumoniae
           CWL029]
 gi|7189783|gb|AAF38660.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           pneumoniae AR39]
 gi|8979358|dbj|BAA99192.1| ribonucleoside reductase, small chain [Chlamydophila pneumoniae
           J138]
 gi|269302786|gb|ACZ32886.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           pneumoniae LPCoLN]
          Length = 346

 Score =  146 bits (369), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 66/124 (53%), Positives = 91/124 (73%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +WT E Q++   ++ +A  LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEVWTTELQEEIVALIEKAVELEIEYAKDCLPRGILGL 283

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            +     Y++ IA+RR  +IGL+P++ ++ NPFPWMSE +DL KEKNFFETRVTEYQ   
Sbjct: 284 RSSMFIDYVRHIADRRLERIGLKPIY-HSRNPFPWMSETMDLNKEKNFFETRVTEYQTAG 342

Query: 121 ELKW 124
            L W
Sbjct: 343 NLSW 346


>gi|149173739|ref|ZP_01852368.1| ribonucleotide-diphosphate reductase beta subunit [Planctomyces
           maris DSM 8797]
 gi|148847269|gb|EDL61603.1| ribonucleotide-diphosphate reductase beta subunit [Planctomyces
           maris DSM 8797]
          Length = 359

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 72/125 (57%), Positives = 86/125 (68%), Gaps = 1/125 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP LWT EFQQ     +  A  LEI YA + +P G +GL
Sbjct: 236 LRDETIHLNFGIDLINGIKQENPDLWTPEFQQLIIDRMKYAAELEIEYAKDCLPTGILGL 295

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N     +Y+Q IA+RR  +IGL P    + NPFPWMSE +DL KEKNFFETRVTEYQ   
Sbjct: 296 NGELFREYVQHIADRRLERIGL-PAQYGSANPFPWMSETMDLSKEKNFFETRVTEYQSSG 354

Query: 121 ELKWD 125
            L WD
Sbjct: 355 SLNWD 359


>gi|269839640|ref|YP_003324332.1| ribonucleoside-diphosphate reductase [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269791370|gb|ACZ43510.1| Ribonucleoside-diphosphate reductase [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 353

 Score =  145 bits (367), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 70/125 (56%), Positives = 89/125 (71%), Gaps = 1/125 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP  WT+E ++    M+ +A   EIAYA E +P G +GL
Sbjct: 230 LRDETVHLNFGIDLINTIKEENPEAWTEELRRDLVGMIRQAVEYEIAYARECLPNGVLGL 289

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    +Y+Q+IA+RR  +I L P+   + NPFPWMSE +DL KEKNFFETRVTEYQ   
Sbjct: 290 NADLFREYVQYIADRRLERIEL-PVQYRSRNPFPWMSETMDLPKEKNFFETRVTEYQNAG 348

Query: 121 ELKWD 125
            L WD
Sbjct: 349 TLVWD 353


>gi|300709535|ref|YP_003735349.1| ribonucleotide-diphosphate reductase subunit beta [Halalkalicoccus
           jeotgali B3]
 gi|299123218|gb|ADJ13557.1| ribonucleotide-diphosphate reductase subunit beta [Halalkalicoccus
           jeotgali B3]
          Length = 330

 Score =  140 bits (354), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 62/124 (50%), Positives = 87/124 (70%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDESLHLNFG+D+IN ++ EN  +WT  F+ +   +L EA  LE  YA E  P+  +G+
Sbjct: 208 MRDESLHLNFGVDLINTVREENSGIWTDVFEAEIEGLLREAVELERTYAREACPEEVLGM 267

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                 +Y++++A+RR  Q+G+EP++  T+NPFPWM+E +DL KEKNFFET V EYQ G 
Sbjct: 268 GPAQFAEYVEYVADRRLDQLGMEPVYD-TDNPFPWMAEQVDLNKEKNFFETNVAEYQSGG 326

Query: 121 ELKW 124
            L+W
Sbjct: 327 SLEW 330


>gi|313117005|ref|YP_004038129.1| ribonucleotide reductase, beta subunit [Halogeometricum borinquense
           DSM 11551]
 gi|312294957|gb|ADQ68993.1| ribonucleotide reductase, beta subunit [Halogeometricum borinquense
           DSM 11551]
          Length = 330

 Score =  140 bits (353), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 63/124 (50%), Positives = 85/124 (68%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDESLH+ FG+D+INQI+ ENP  WT EF  + R ++ +A  LE  YA E  P   +G+
Sbjct: 208 MRDESLHVGFGVDLINQIRAENPDAWTDEFGAEVRDLIEKAVDLEQIYAREACPDDVLGM 267

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +     +Y++ +A+RR  Q+ L+  +  T+NPFPWMSE +DL KEKNFFET+VTEYQ G 
Sbjct: 268 SPDQFAEYVEHVADRRLGQLDLDASYG-TDNPFPWMSEAVDLNKEKNFFETQVTEYQSGG 326

Query: 121 ELKW 124
            L W
Sbjct: 327 SLDW 330


>gi|257053403|ref|YP_003131236.1| ribonucleotide-diphosphate reductase subunit beta [Halorhabdus
           utahensis DSM 12940]
 gi|256692166|gb|ACV12503.1| Ribonucleoside-diphosphate reductase [Halorhabdus utahensis DSM
           12940]
          Length = 330

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 64/124 (51%), Positives = 86/124 (69%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDESLH+ FG+D+I+QI+ ENP +WT EF  +   ++ EA  LE  YA E  P+  +G+
Sbjct: 208 MRDESLHVGFGVDLIDQIRTENPGVWTDEFDSEVIDLIKEAVELEQIYAREACPEEILGM 267

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +      Y+++IA+RR  Q+ L   +  TENPFPWMSE +DL KEKNFFET+VTEYQ G 
Sbjct: 268 SGSQFADYVEYIADRRLDQLDLPEQYG-TENPFPWMSEQVDLNKEKNFFETQVTEYQSGG 326

Query: 121 ELKW 124
            L+W
Sbjct: 327 SLEW 330


>gi|15791173|ref|NP_280997.1| ribonucleotide-diphosphate reductase subunit beta [Halobacterium
           sp. NRC-1]
 gi|169236929|ref|YP_001690129.1| ribonucleotide-diphosphate reductase subunit beta [Halobacterium
           salinarum R1]
 gi|10581791|gb|AAG20477.1| ribonucleoside reductase small chain [Halobacterium sp. NRC-1]
 gi|167727995|emb|CAP14783.1| ribonucleoside-diphosphate reductase beta subunit [Halobacterium
           salinarum R1]
          Length = 331

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 58/125 (46%), Positives = 89/125 (71%), Gaps = 1/125 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDESLHLNFG+D+INQI+ E+P +WT +F+ +  +++ +A  LE  YA +  P   +G+
Sbjct: 208 MRDESLHLNFGVDLINQIRDEHPDVWTADFEAEVNSLMRDAVDLEQLYARDACPDDLLGM 267

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           ++     Y++++A+RR  Q+ ++P++  T+NPFPWM+E +DL  E NFFE  V+EYQQG 
Sbjct: 268 SSEQFADYVEYVADRRFQQLRMDPVYG-TDNPFPWMTEQVDLNTETNFFERNVSEYQQGG 326

Query: 121 ELKWD 125
            L WD
Sbjct: 327 SLDWD 331


>gi|289582310|ref|YP_003480776.1| ribonucleoside-diphosphate reductase [Natrialba magadii ATCC 43099]
 gi|289531863|gb|ADD06214.1| Ribonucleoside-diphosphate reductase [Natrialba magadii ATCC 43099]
          Length = 330

 Score =  135 bits (340), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 63/124 (50%), Positives = 86/124 (69%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDESLH+ FG+D+I+QI++ENP +WT  F  +   ++ EA  LE  YA+E  P   +G+
Sbjct: 208 MRDESLHVGFGVDLIDQIRMENPDVWTDAFGDEVVELITEAVELEKIYAYEACPDEILGM 267

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A    +Y++ IA+RR  Q+ L P    T+NPFPW+SE +DL KEKNFFET+VTEYQ G 
Sbjct: 268 SADQFAEYVEHIADRRLGQLDL-PTQYGTDNPFPWLSEQVDLNKEKNFFETQVTEYQSGG 326

Query: 121 ELKW 124
            L W
Sbjct: 327 SLDW 330


>gi|322368525|ref|ZP_08043093.1| ribonucleotide-diphosphate reductase subunit beta [Haladaptatus
           paucihalophilus DX253]
 gi|320551809|gb|EFW93455.1| ribonucleotide-diphosphate reductase subunit beta [Haladaptatus
           paucihalophilus DX253]
          Length = 330

 Score =  135 bits (340), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/124 (50%), Positives = 85/124 (68%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH+ FG+D+IN+I+ ENP+ WT  F  +   ++  A  LE  YA+E  P   +G+
Sbjct: 208 LRDESLHVGFGVDLINEIRAENPNAWTDAFGDEVTDLITNAVELEKIYAYEACPDEILGM 267

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A    +Y++ IA+RR  Q+ L+  +  TENPFPWMSE +DL KEKNFFET+VTEYQ G 
Sbjct: 268 SAAQFAEYVEHIADRRLAQLDLDEQYG-TENPFPWMSEQVDLNKEKNFFETQVTEYQSGG 326

Query: 121 ELKW 124
            L W
Sbjct: 327 SLDW 330


>gi|291336894|gb|ADD96423.1| hypothetical protein [uncultured organism MedDCM-OCT-S09-C426]
          Length = 147

 Score =  127 bits (319), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 58/125 (46%), Positives = 83/125 (66%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH+NFG  +IN +K + P +WTK+F++++   + +A  LEI YAH+ +P+G +GL
Sbjct: 22  LRDESLHINFGTYLINTLKEQYPTIWTKKFEEETIEHIKKAVQLEINYAHDVLPRGILGL 81

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA     YM +I NRR   IGL+  F+   NPFPW+SEV+D     NFFE +V +YQ   
Sbjct: 82  NADMFVDYMHYIGNRRLEGIGLDYRFESDTNPFPWLSEVVDTGAMTNFFERKVKDYQNSG 141

Query: 121 ELKWD 125
            L+ D
Sbjct: 142 VLEDD 146


>gi|118500933|gb|ABK97635.1| ribonucleoside diphosphate reductase beta subunit [Allochromatium
           vinosum DSM 180]
          Length = 280

 Score =  120 bits (300), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 54/81 (66%), Positives = 65/81 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLWT +F+Q+   M+ EA  LE  YAH+TMP+G +GL
Sbjct: 200 LRDESMHMNFGIDVINQIKIENPHLWTPDFRQELVGMIREAVELEARYAHDTMPRGVLGL 259

Query: 61  NAPSCEQYMQFIANRRCHQIG 81
           NA   E Y+ FIANRRC QIG
Sbjct: 260 NAQMFEDYLHFIANRRCAQIG 280


>gi|284043177|ref|YP_003393517.1| ribonucleoside-diphosphate reductase [Conexibacter woesei DSM
           14684]
 gi|283947398|gb|ADB50142.1| Ribonucleoside-diphosphate reductase [Conexibacter woesei DSM
           14684]
          Length = 364

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 54/122 (44%), Positives = 81/122 (66%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES H+     ++ ++  ENP +WT EF+ + R ++ EA  LE  +  + +P   VGL
Sbjct: 235 LRDESNHIELFRRLLRELVAENPEIWTAEFRDELRELMREAVALEQRFIDDCLPVEGVGL 294

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    QY+ +IA+RR   +GLEPL    ENP PW++E++D++KE+NFFE RVTEYQ+ +
Sbjct: 295 NADEFAQYIDYIADRRLEGVGLEPLKPGVENPLPWLAELMDVRKEQNFFEGRVTEYQKAS 354

Query: 121 EL 122
            L
Sbjct: 355 AL 356


>gi|153875510|ref|ZP_02003277.1| ribonucleotide-diphosphate reductase beta subunit [Beggiatoa sp.
           PS]
 gi|152068026|gb|EDN66723.1| ribonucleotide-diphosphate reductase beta subunit [Beggiatoa sp.
           PS]
          Length = 374

 Score =  114 bits (286), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 57/125 (45%), Positives = 81/125 (64%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVGL 60
           RDE+LH + G+ +I QI  EN  LW    Q++SR ++ EA  LE  YAH +MP+ G VGL
Sbjct: 251 RDENLHSSNGLWLIKQIIQENHELWDSTMQERSRAIVSEAVKLETDYAHASMPEGGIVGL 310

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
              +  ++  F+A+  C  +G++PLF+  E+P PW+SE  +L  E NFFE RV EYQ G+
Sbjct: 311 PVKTYIKFSHFVADNICKNLGIKPLFRVREHPMPWISEY-ELNHEVNFFEGRVREYQTGS 369

Query: 121 ELKWD 125
           +L WD
Sbjct: 370 QLTWD 374


>gi|294055010|ref|YP_003548668.1| Ribonucleoside-diphosphate reductase [Coraliomargarita akajimensis
           DSM 45221]
 gi|293614343|gb|ADE54498.1| Ribonucleoside-diphosphate reductase [Coraliomargarita akajimensis
           DSM 45221]
          Length = 360

 Score =  114 bits (284), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 53/122 (43%), Positives = 81/122 (66%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES H+    ++I  +  EN  +WT EF+++ R ++ EA  LE  +  + +P   VGL
Sbjct: 231 LRDESNHIEVFRNLIMDLIEENEDVWTPEFREELRDLMREAVTLEKDFIRDCLPVNSVGL 290

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A    QY+ +IA+RR   +GL PL    +NPFPW++E++D+KKE+NFFE RVTEYQ+ +
Sbjct: 291 SADEFCQYIDYIADRRLEGVGLAPLSPGVDNPFPWLAEMMDIKKEQNFFEGRVTEYQKAS 350

Query: 121 EL 122
            L
Sbjct: 351 AL 352


>gi|254442775|ref|ZP_05056251.1| ribonucleoside-diphosphate reductase, beta subunit
           [Verrucomicrobiae bacterium DG1235]
 gi|198257083|gb|EDY81391.1| ribonucleoside-diphosphate reductase, beta subunit
           [Verrucomicrobiae bacterium DG1235]
          Length = 361

 Score =  106 bits (265), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 50/123 (40%), Positives = 76/123 (61%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES H+    ++   +  ENP +WT EF+ + R  + EA  LE  +  + +P   +GL
Sbjct: 232 LRDESNHIELLRNLFMDLIEENPDVWTPEFKAELRDAMSEAIALEKEFIADCLPVDSIGL 291

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                 QY+ +IA+RR    GL+PL     NP PW++E++D+KKE+NFFE RVTEYQ+ +
Sbjct: 292 RKEDFVQYIDYIADRRLEGCGLDPLTPGVTNPLPWLAEMMDIKKEQNFFEGRVTEYQKAS 351

Query: 121 ELK 123
            L+
Sbjct: 352 SLE 354


>gi|88856487|ref|ZP_01131145.1| ribonucleotide-diphosphate reductase beta subunit [marine
           actinobacterium PHSC20C1]
 gi|88814354|gb|EAR24218.1| ribonucleotide-diphosphate reductase beta subunit [marine
           actinobacterium PHSC20C1]
          Length = 332

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 77/120 (64%), Gaps = 1/120 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FGI++I  +  ENP + T+EF  + R M+ +A  +E AY H+ +P G +GL
Sbjct: 205 VRDESLHLKFGINLILTVLEENPEIQTEEFADEIRQMILDAVEMEEAYNHDLLPGGILGL 264

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    QY++++A+RR  ++G EP +K T NP  WM+   D  +  NFFE+  T Y+  A
Sbjct: 265 NANYINQYVKYLADRRLEELGFEPHYKVT-NPAKWMATANDTLELVNFFESTNTSYEANA 323


>gi|196233679|ref|ZP_03132520.1| Ribonucleoside-diphosphate reductase [Chthoniobacter flavus
           Ellin428]
 gi|196222349|gb|EDY16878.1| Ribonucleoside-diphosphate reductase [Chthoniobacter flavus
           Ellin428]
          Length = 390

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 50/123 (40%), Positives = 71/123 (57%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES H+  G  ++ Q+  ENP +WT EF+ +    + E   LE  +  + +P+  VG+
Sbjct: 260 LRDESNHIELGRYILTQLIAENPDIWTPEFRAELVEFMREGVELEKEFVRDCLPEDGVGM 319

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                  Y+++ A+RR   + L  L     NPF W+ EVI L+KEKNFFETRVTEYQ   
Sbjct: 320 TQADFLTYVEYNADRRLAGLDLPALSGVKTNPFAWLDEVIFLRKEKNFFETRVTEYQTSG 379

Query: 121 ELK 123
            LK
Sbjct: 380 SLK 382


>gi|241589542|ref|YP_002979567.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D]
 gi|240868254|gb|ACS65913.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D]
          Length = 328

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 45/77 (58%), Positives = 58/77 (75%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 233 LRDESLHCNFGIDLINQIKLENPHLWTAEFKVEITELFKQAVDLEYRYAEDTMPRGVLGL 292

Query: 61  NAPSCEQYMQFIANRRC 77
           NA   + Y++FI NRRC
Sbjct: 293 NASMFKGYLRFICNRRC 309


>gi|171913278|ref|ZP_02928748.1| ribonucleotide-diphosphate reductase subunit beta [Verrucomicrobium
           spinosum DSM 4136]
          Length = 361

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 48/122 (39%), Positives = 74/122 (60%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES H+    ++   +  ENP +WT EF+++   ++ EA  LE  +  + +P   VGL
Sbjct: 232 LRDESNHIKVFRNLFMDLIDENPEIWTPEFREELVELMKEAVALEKEFIRDCLPVAAVGL 291

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A   E Y+ FIA+RR   +GL  L     NP PW++E+ D++KE+NFFE  VT+YQ+ +
Sbjct: 292 TAGEFELYIDFIADRRLASVGLPALTPGIVNPLPWLAEMQDIRKEQNFFEGTVTDYQKAS 351

Query: 121 EL 122
            L
Sbjct: 352 SL 353


>gi|225164890|ref|ZP_03727109.1| Ribonucleoside-diphosphate reductase [Opitutaceae bacterium TAV2]
 gi|224800504|gb|EEG18881.1| Ribonucleoside-diphosphate reductase [Opitutaceae bacterium TAV2]
          Length = 362

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 76/123 (61%), Gaps = 1/123 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES H+    +++  +  ENP +WT  F+++ R  + EA  LE  +  + +P   VGL
Sbjct: 232 LRDESNHIEVFRNLLMDLVEENPEIWTPGFKEELRETMREAVTLEKEFIRDCLPVNAVGL 291

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                  Y+ +IA+RR   +GL P+     +NP PW++E++D+KKE+NFFE RVTEYQ+ 
Sbjct: 292 AVDEFLTYIDYIADRRLEGVGLAPISATPIKNPLPWLAEMMDIKKEQNFFEGRVTEYQKA 351

Query: 120 AEL 122
           + L
Sbjct: 352 SSL 354


>gi|117928932|ref|YP_873483.1| ribonucleoside-diphosphate reductase [Acidothermus cellulolyticus
           11B]
 gi|117649395|gb|ABK53497.1| Ribonucleoside-diphosphate reductase [Acidothermus cellulolyticus
           11B]
          Length = 348

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 79/126 (62%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F  DVI+ ++ E P L+  E  +++R ML EA   E  +A + + +G  G++
Sbjct: 222 RDESMHMAFAFDVIDTVRREEPELFDDELARQAREMLAEAVDCETQFAEDLLGQGVPGMS 281

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
                 Y++ +A+RRC Q+GLEP++  + NPF +M E+ D+++  NFFE RV  YQ G  
Sbjct: 282 LADMRSYLEHVADRRCVQLGLEPIYG-SPNPFTFM-ELQDVQELSNFFERRVAAYQIGVS 339

Query: 120 AELKWD 125
            E+ +D
Sbjct: 340 GEVAFD 345


>gi|330467634|ref|YP_004405377.1| ribonucleoside-diphosphate reductase [Verrucosispora maris
           AB-18-032]
 gi|328810605|gb|AEB44777.1| Ribonucleoside-diphosphate reductase [Verrucosispora maris
           AB-18-032]
          Length = 342

 Score = 98.6 bits (244), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 74/118 (62%), Gaps = 2/118 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F  DV++ ++ E P L+  E +Q+ R ML EA   E+ +A + + +G  G+ 
Sbjct: 216 RDESMHMAFAFDVVDTVRAEEPDLFDAEMEQQVRDMLAEAVDCEVQFAADLLEQGVSGMP 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY+Q +A+RR   +G+ P++  T NPF +M E+ D+++  NFFE RV+ YQ G
Sbjct: 276 LADMRQYLQHVADRRLAMLGIAPMYGST-NPFAFM-ELQDVQELSNFFERRVSAYQVG 331


>gi|149375674|ref|ZP_01893443.1| Ribonucleotide reductase, beta subunit [Marinobacter algicola
           DG893]
 gi|149360076|gb|EDM48531.1| Ribonucleotide reductase, beta subunit [Marinobacter algicola
           DG893]
          Length = 352

 Score = 98.2 bits (243), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/125 (43%), Positives = 75/125 (60%), Gaps = 5/125 (4%)

Query: 1   MRDESLHLNFGIDVINQI-KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
           +RDE++H +FG+ V+NQI + EN  L  K      R M  E+   E AYA+  +    +G
Sbjct: 232 LRDEAMHFSFGLKVVNQILEEENITLDPKAV----RDMWDESEAAETAYANYILRDPILG 287

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
            +A    +  +F+ANRR   +GLE  F   +N  PW+ E   L+KEKNFFETRV EYQ G
Sbjct: 288 YSAQYHSEQFRFVANRRARTVGLEEPFPGAKNVSPWLDEQATLRKEKNFFETRVIEYQTG 347

Query: 120 AELKW 124
           A+L+W
Sbjct: 348 AQLEW 352


>gi|238061574|ref|ZP_04606283.1| ribonucleoside-diphosphate reductase [Micromonospora sp. ATCC
           39149]
 gi|237883385|gb|EEP72213.1| ribonucleoside-diphosphate reductase [Micromonospora sp. ATCC
           39149]
          Length = 344

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 47/119 (39%), Positives = 74/119 (62%), Gaps = 2/119 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F  DV++ ++ E P L+  E  ++ R ML EA   E  +A + + +G  GL+
Sbjct: 218 RDESMHMAFAFDVVDTVRHEEPDLFDDELARQVREMLAEAVECEAQFAEDLLEQGVSGLS 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY+Q +A+RR  Q+G+ PL+  + NPF +M E+ D+++  NFFE RV+ YQ G 
Sbjct: 278 LDDMRQYLQHVADRRLAQLGIAPLYG-SANPFAFM-ELQDVQELSNFFERRVSAYQVGV 334


>gi|120556760|ref|YP_961111.1| ribonucleoside-diphosphate reductase [Marinobacter aquaeolei VT8]
 gi|120326609|gb|ABM20924.1| Ribonucleoside-diphosphate reductase [Marinobacter aquaeolei VT8]
          Length = 352

 Score = 97.4 bits (241), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 3/124 (2%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H +FG+ V+NQI  E          +  R M  E+   E+AYA+  +    +G 
Sbjct: 232 LRDEAMHFSFGLKVVNQILEEEKITLDP---KAVREMWDESEAAEMAYANYVLRDPILGY 288

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A    +  +F+ANRR   +GLE  F   +N  PW+ E   L+KEKNFFETRV EYQ GA
Sbjct: 289 SAEYHSEQFRFVANRRARTVGLEEPFPGAKNVSPWLDEQATLRKEKNFFETRVIEYQTGA 348

Query: 121 ELKW 124
           +L+W
Sbjct: 349 QLEW 352


>gi|311696539|gb|ADP99412.1| ribonucleotide-diphosphate reductase beta subunit [marine bacterium
           HP15]
          Length = 352

 Score = 97.4 bits (241), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 53/125 (42%), Positives = 76/125 (60%), Gaps = 5/125 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKS-RTMLHEATLLEIAYAHETMPKGFVG 59
           +RDE++H +FG+ V+NQI +E  ++    F  K+ R M  E+   E AYA   +    +G
Sbjct: 232 LRDEAMHFSFGLKVVNQI-VEEENI---TFDPKAVREMWDESEAAEKAYADYILRDPILG 287

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
            +A    +  +F+ANRR   +GLE  F   +N  PW+ E   L+KEKNFFETRV EYQ G
Sbjct: 288 YSAEYHSEQFRFVANRRARTVGLEEPFPGAKNVSPWLDEQATLRKEKNFFETRVIEYQTG 347

Query: 120 AELKW 124
           A+L+W
Sbjct: 348 AQLEW 352


>gi|94986920|ref|YP_594853.1| ribonucleotide reductase, beta subunit [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731169|emb|CAJ54531.1| Ribonucleotide reductase, beta subunit [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 333

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/126 (45%), Positives = 73/126 (57%), Gaps = 5/126 (3%)

Query: 1   MRDESLHLNFGIDVINQ-IKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
           +RDE LH  FGI VI   I+ EN  L     +Q    +  E    EIAYA+  + +  +G
Sbjct: 212 LRDEVLHCTFGITVIKGLIEEENITLDPTAVRQ----LWDEVEAAEIAYANYILHEPIIG 267

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
            NA       +FIANRR  Q+G++  F   +N  PW+ E  +L+KEKNFFETRVTEYQ G
Sbjct: 268 YNADLHIGQFRFIANRRSRQLGMKEPFPGAKNVLPWLDEQSNLRKEKNFFETRVTEYQTG 327

Query: 120 AELKWD 125
             LKWD
Sbjct: 328 GGLKWD 333


>gi|148273612|ref|YP_001223173.1| ribonucleotide-diphosphate reductase subunit beta [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
 gi|170782700|ref|YP_001711034.1| ribonucleotide-diphosphate reductase subunit beta [Clavibacter
           michiganensis subsp. sepedonicus]
 gi|147831542|emb|CAN02508.1| putative ribonucleoside-diphosphate reductase beta subunit
           [Clavibacter michiganensis subsp. michiganensis NCPPB
           382]
 gi|169157270|emb|CAQ02455.1| ribonucleoside-diphosphate reductase beta subunit [Clavibacter
           michiganensis subsp. sepedonicus]
          Length = 331

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/120 (40%), Positives = 74/120 (61%), Gaps = 1/120 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FGI++I  +  ENP L T+EF  + + M+ +A  +E  Y  + +P G +GL
Sbjct: 206 VRDESLHLKFGINLILTVLEENPDLQTEEFAAEIKQMILDAVEMEEQYNRDLLPNGILGL 265

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    QY++++A+RR  ++G E  +K + NP  WM+   D  +  NFFE+  T Y+  A
Sbjct: 266 NANYINQYVKYLADRRLEELGFEAEYKVS-NPAKWMATANDTLQLVNFFESTNTSYESNA 324


>gi|311743885|ref|ZP_07717691.1| ribonucleotide-diphosphate reductase beta subunit [Aeromicrobium
           marinum DSM 15272]
 gi|311313015|gb|EFQ82926.1| ribonucleotide-diphosphate reductase beta subunit [Aeromicrobium
           marinum DSM 15272]
          Length = 357

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 74/122 (60%), Gaps = 1/122 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FGI++I  +  ENP + T EF  + + M+ +A  +E AY  + +P G +GL
Sbjct: 236 VRDESLHLKFGINLILTVLEENPEVATAEFAAEIQQMVLDAVEMEEAYNRDLLPGGILGL 295

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    QY++++A+RR  ++G  P +  T NP  WM+   D  +  NFFE   T Y+  A
Sbjct: 296 NADYINQYVRYLADRRLEELGFGPHYGAT-NPAKWMATANDTLQLVNFFEATNTSYEVNA 354

Query: 121 EL 122
           +L
Sbjct: 355 KL 356


>gi|83649535|ref|YP_437970.1| ribonucleotide reductase subunit beta [Hahella chejuensis KCTC
           2396]
 gi|83637578|gb|ABC33545.1| Ribonucleotide reductase, beta subunit [Hahella chejuensis KCTC
           2396]
          Length = 405

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/125 (44%), Positives = 70/125 (56%), Gaps = 5/125 (4%)

Query: 1   MRDESLHLNFGIDVINQI-KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
           MRDE +H  FGI V+ QI K E   L  K      +T+  EA   E  YAH  + +  +G
Sbjct: 285 MRDEVMHCAFGIRVVKQIIKEEGVTLDPKAI----KTLWEEAEAAETGYAHFLLKEPILG 340

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
             A    +  +FIANRR  Q+ L+  F    N  PW+ E   ++KEKNFFETRVTEYQ G
Sbjct: 341 YTAEDHIEQFRFIANRRAKQLKLDEPFPGAGNALPWLDEQASMRKEKNFFETRVTEYQTG 400

Query: 120 AELKW 124
           A L+W
Sbjct: 401 ASLQW 405


>gi|330949820|gb|EGH50080.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae Cit 7]
          Length = 359

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 54/69 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKKEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYM 69
           NA   E Y+
Sbjct: 351 NAAMMEDYL 359


>gi|28493649|ref|NP_787810.1| ribonucleotide-diphosphate reductase subunit beta [Tropheryma
           whipplei str. Twist]
 gi|28572842|ref|NP_789622.1| ribonucleotide-diphosphate reductase subunit beta [Tropheryma
           whipplei TW08/27]
 gi|28410975|emb|CAD67360.1| ribonucleotide-diphosphate reductase small chain [Tropheryma
           whipplei TW08/27]
 gi|28476691|gb|AAO44779.1| ribonucleotide reductase beta chain [Tropheryma whipplei str.
           Twist]
          Length = 327

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 47/120 (39%), Positives = 71/120 (59%), Gaps = 1/120 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FGI++I  +  ENP L T +F  + R M+     +E  Y H+ +P G +GL
Sbjct: 205 VRDESLHLKFGINLILTVLEENPDLQTSDFADEIRGMIIAGVEMEEEYNHDLLPNGILGL 264

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N+    QY++++A+RR  ++G +P +  T NP  WM+   D  +  NFFE   T Y+  A
Sbjct: 265 NSGYINQYVKYLADRRLEELGFDPEYNVT-NPAKWMATANDTFELVNFFEAINTSYESNA 323


>gi|330949821|gb|EGH50081.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae Cit 7]
          Length = 65

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 42/65 (64%), Positives = 48/65 (73%)

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N    E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 1   NGAGMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 60

Query: 121 ELKWD 125
            L WD
Sbjct: 61  ALSWD 65


>gi|50955339|ref|YP_062627.1| ribonucleotide-diphosphate reductase subunit beta [Leifsonia xyli
           subsp. xyli str. CTCB07]
 gi|50951821|gb|AAT89522.1| ribonucleoside-diphosphate reductase, beta chain [Leifsonia xyli
           subsp. xyli str. CTCB07]
          Length = 329

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 74/121 (61%), Gaps = 1/121 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FGI++I  +  ENP L T EF  + + M+ +A  +E  Y  + +P G +GL
Sbjct: 205 VRDESLHLKFGINLILTVLEENPDLQTPEFAAEIKQMILDAVEMEEQYNRDLLPGGILGL 264

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    QY++++A+RR  ++G E  +K + NP  WM+   D  +  NFFE+  T Y+  A
Sbjct: 265 NANYINQYVKYLADRRLEELGFEAEYKVS-NPAKWMATANDTLELVNFFESTNTSYESNA 323

Query: 121 E 121
           +
Sbjct: 324 K 324


>gi|90023100|ref|YP_528927.1| amino acid adenylation [Saccharophagus degradans 2-40]
 gi|89952700|gb|ABD82715.1| Class Ia ribonucleoside-diphosphate reductase beta subunit
           [Saccharophagus degradans 2-40]
          Length = 368

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/125 (43%), Positives = 72/125 (57%), Gaps = 4/125 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDE++H  FGI  ++QI IEN    T       +TM  EA   E  YA   + +  +G 
Sbjct: 248 MRDETMHCAFGIQTVSQIIIENC---TNIDVDAIKTMWEEADEAEANYARYILREPILGY 304

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A    +  +FIANRR  Q+GLE  F   +   PW+ E  +++KEKNFFETRV EYQ G 
Sbjct: 305 SANDHIEQFRFIANRRARQLGLEEPFPQAKCALPWLDEQANIRKEKNFFETRVIEYQAGG 364

Query: 121 ELKWD 125
            L+WD
Sbjct: 365 -LEWD 368


>gi|254492407|ref|ZP_05105579.1| ribonucleoside-diphosphate reductase, beta subunit [Methylophaga
           thiooxidans DMS010]
 gi|224462299|gb|EEF78576.1| ribonucleoside-diphosphate reductase, beta subunit [Methylophaga
           thiooxydans DMS010]
          Length = 383

 Score = 94.0 bits (232), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 55/126 (43%), Positives = 69/126 (54%), Gaps = 5/126 (3%)

Query: 1   MRDESLHLNFGIDVINQI-KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
           MRDE +H +FGI V  QI K EN  L  K+ QQ    M  EA   E  YA   +    +G
Sbjct: 262 MRDEVMHASFGIRVCKQIMKEENITLDPKKVQQ----MFEEADAAEETYAGYILRDPILG 317

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
            +        ++ ANRR  Q+G E  F   E   PW+ E  +++KEKNFFET+VTEYQ G
Sbjct: 318 YSKEVHHGQFRYTANRRAKQLGFEEPFPGAEATLPWLDEQANMRKEKNFFETKVTEYQTG 377

Query: 120 AELKWD 125
             LKWD
Sbjct: 378 GGLKWD 383


>gi|256391238|ref|YP_003112802.1| ribonucleoside-diphosphate reductase [Catenulispora acidiphila DSM
           44928]
 gi|256357464|gb|ACU70961.1| Ribonucleoside-diphosphate reductase [Catenulispora acidiphila DSM
           44928]
          Length = 331

 Score = 93.6 bits (231), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F  DV++ ++ E P L+ ++  Q+ R ML EA   E  +A + +  G  GL 
Sbjct: 205 RDESMHMAFAFDVVDTVRAEEPDLFDEKMAQQVREMLAEAVECETQFAGDLLGGGVSGLP 264

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ--QG 119
                 Y++ +A+RR  Q+GLEP++  T NP  +M E+ D+++  NFFE RV+ YQ   G
Sbjct: 265 VADMRAYLEHVADRRLEQLGLEPMYG-TANPLGFM-ELQDVQELSNFFERRVSAYQVAVG 322

Query: 120 AELKWD 125
             + +D
Sbjct: 323 GSVSFD 328


>gi|145596896|ref|YP_001161193.1| ribonucleoside-diphosphate reductase [Salinispora tropica CNB-440]
 gi|145306233|gb|ABP56815.1| Ribonucleoside-diphosphate reductase [Salinispora tropica CNB-440]
          Length = 350

 Score = 93.6 bits (231), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 75/118 (63%), Gaps = 2/118 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F  DV++ ++ E P L+  + +++ + M+ EA   E+ +A + + +G  GL+
Sbjct: 224 RDESMHMAFAFDVVDTVRAEEPDLFDADLERQVKEMVAEAVDCEVQFAEDLLEQGVSGLS 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                +Y+Q +A+RR   +G+ P++  + NPF +M E+ D+++  NFFE RV+ YQ G
Sbjct: 284 LADMREYLQHVADRRLVTLGIAPMYG-SANPFAFM-ELQDVQELSNFFERRVSAYQMG 339


>gi|302867100|ref|YP_003835737.1| ribonucleotide reductase [Micromonospora aurantiaca ATCC 27029]
 gi|315506490|ref|YP_004085377.1| ribonucleotide reductase [Micromonospora sp. L5]
 gi|302569959|gb|ADL46161.1| ribonucleotide reductase [Micromonospora aurantiaca ATCC 27029]
 gi|315413109|gb|ADU11226.1| ribonucleotide reductase [Micromonospora sp. L5]
          Length = 342

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 75/118 (63%), Gaps = 2/118 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F  DV+  ++ E P L+  E +++ + ML EA   E+++A + + +G  G++
Sbjct: 216 RDESMHMAFAFDVVETVRAEEPDLFDDEMERQVKEMLAEAVECEVSFAEDLLGQGVPGMS 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                +Y+Q +A+RR   +G+ P++  + NPF +M E+ D+++  NFFE RV+ YQ G
Sbjct: 276 LADMREYLQHVADRRLAVLGIAPMYG-SGNPFAFM-ELQDVQELSNFFERRVSAYQVG 331


>gi|87311395|ref|ZP_01093515.1| ribonucleotide-diphosphate reductase beta subunit [Blastopirellula
           marina DSM 3645]
 gi|87285807|gb|EAQ77721.1| ribonucleotide-diphosphate reductase beta subunit [Blastopirellula
           marina DSM 3645]
          Length = 313

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 41/82 (50%), Positives = 57/82 (69%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP LWT EFQ +   ++ +A  LEI YA + +P G +GL
Sbjct: 229 LRDETVHLNFGIDLINGIKAENPDLWTAEFQAEIIDLIKQAVELEIEYAGDCLPNGILGL 288

Query: 61  NAPSCEQYMQFIANRRCHQIGL 82
           N      Y+ ++A+RR  +IGL
Sbjct: 289 NRDLFRDYVHYVADRRVERIGL 310


>gi|159040364|ref|YP_001539617.1| ribonucleoside-diphosphate reductase [Salinispora arenicola
           CNS-205]
 gi|157919199|gb|ABW00627.1| Ribonucleoside-diphosphate reductase [Salinispora arenicola
           CNS-205]
          Length = 350

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 75/118 (63%), Gaps = 2/118 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F  DV++ I+ E P L+  + +++ + M+ EA   E  +A + + +G  GL+
Sbjct: 224 RDESMHMAFAFDVVDTIRAEEPDLFDADLERQIKDMVTEAVDCEAQFAEDLLEQGVSGLS 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                +Y+Q +A+RR   +G+ P++  ++NPF +M E+ D+++  NFFE RV+ YQ G
Sbjct: 284 LADMREYLQHVADRRLVTLGIAPIYG-SQNPFAFM-ELQDVQELSNFFERRVSAYQVG 339


>gi|168702494|ref|ZP_02734771.1| ribonucleoside-diphosphate reductase, beta subunit [Gemmata
           obscuriglobus UQM 2246]
          Length = 332

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 71/118 (60%), Gaps = 2/118 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H+ F   VI+ ++ E P L+  E + +   ML EA   E A+A + + +G  GL+
Sbjct: 206 RDESAHMAFAFRVIDTVRREEPDLFDAELEAQIVAMLREAVECETAFARDVLGQGVAGLS 265

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                 Y++++A+RR   +G+ P+F   +NPF +M ++ D+++  NFFE RV+ YQ G
Sbjct: 266 LADLRSYLEYVADRRLESLGIAPVFG-AKNPFGFM-DLQDVQELTNFFERRVSAYQLG 321


>gi|167948644|ref|ZP_02535718.1| Ribonucleotide reductase, beta subunit [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 124

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 52/125 (41%), Positives = 64/125 (51%), Gaps = 3/125 (2%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDE LH +FGI V  QI +E          Q  R M  E    E AYA   +    +G 
Sbjct: 3   MRDEVLHASFGIRVAKQIMLEEN---IAPDPQAIREMWDECEAAEDAYAGYILRDPILGY 59

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +        +++ANRR  QIGL   +   E   PW+ E  +L+KEKNFFET VTEYQ G 
Sbjct: 60  SKDDHMGQFRYVANRRARQIGLSEPYPGAEATLPWLDEQANLRKEKNFFETTVTEYQTGG 119

Query: 121 ELKWD 125
            L WD
Sbjct: 120 ALNWD 124


>gi|326403282|ref|YP_004283363.1| ribonucleoside-diphosphate reductase beta subunit [Acidiphilium
           multivorum AIU301]
 gi|325050143|dbj|BAJ80481.1| ribonucleoside-diphosphate reductase beta subunit [Acidiphilium
           multivorum AIU301]
          Length = 338

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 75/131 (57%), Gaps = 10/131 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK-----SRTMLHEATLLEIAYAHETMPK 55
           +RDESLH N  I +      ENP +WT+E +++     +  + HE   +++A+    +  
Sbjct: 208 VRDESLHCNSVIKLFRTFVAENPEIWTEELRREIYLCCATIVDHEDAFIDLAFEFGAVE- 266

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL A   ++Y+++IA+RR  Q+GL PLF   +NP PW+ E+++  +  NFFE R TE
Sbjct: 267 ---GLTAEEVKRYIRYIADRRLLQLGLNPLFHVDKNPLPWLDEMLNAVEHTNFFENRATE 323

Query: 116 YQQGAEL-KWD 125
           Y + +    WD
Sbjct: 324 YSKASTAGSWD 334


>gi|58584525|ref|YP_198098.1| ribonucleotide-diphosphate reductase subunit beta [Wolbachia
           endosymbiont strain TRS of Brugia malayi]
 gi|58418841|gb|AAW70856.1| Ribonucleotide reductase, beta subunit [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
          Length = 331

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 68/120 (56%), Gaps = 1/120 (0%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60
           RDE+LH N  I++ N    EN  +W  EF++   +       LE  +       G V GL
Sbjct: 193 RDETLHTNSIINLFNTFIKENNEIWNDEFKEGLYSACRTIVGLEDEFIKLAFDLGDVEGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A     Y+++IANRR  Q+GL+P++   +NP PW+ E+++  +  NFFE RVTEY + A
Sbjct: 253 SAEEVRNYIRYIANRRLMQLGLKPIYDINDNPLPWLDEILNGVEHTNFFENRVTEYSRAA 312


>gi|148259750|ref|YP_001233877.1| ribonucleotide-diphosphate reductase subunit beta [Acidiphilium
           cryptum JF-5]
 gi|146401431|gb|ABQ29958.1| Ribonucleoside-diphosphate reductase [Acidiphilium cryptum JF-5]
          Length = 338

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 75/131 (57%), Gaps = 10/131 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK-----SRTMLHEATLLEIAYAHETMPK 55
           +RDESLH N  I +      ENP +WT+E +++     +  + HE   +++A+    +  
Sbjct: 208 VRDESLHCNSVIKLFRTFVAENPEIWTEELRREIYLCCATIVDHEDAFIDLAFEFGAVE- 266

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL A   ++Y+++IA+RR  Q+GL PLF   +NP PW+ E+++  +  NFFE R TE
Sbjct: 267 ---GLTAEEVKRYIRYIADRRLLQLGLNPLFHVDKNPLPWLDEMLNAVEHTNFFENRATE 323

Query: 116 YQQGAEL-KWD 125
           Y + +    WD
Sbjct: 324 YSKASTAGSWD 334


>gi|225873704|ref|YP_002755163.1| ribonucleoside-diphosphate reductase, beta subunit [Acidobacterium
           capsulatum ATCC 51196]
 gi|225791613|gb|ACO31703.1| ribonucleoside-diphosphate reductase, beta subunit [Acidobacterium
           capsulatum ATCC 51196]
          Length = 340

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 2/119 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES HL F  +V+N ++ + P LW  + +     MLHEA   E  +A + +  G  GL+
Sbjct: 214 RDESCHLEFAFEVVNVVRSQEPDLWDAQLEADIVEMLHEAVDAETQFAEDLLSGGVAGLS 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY+ ++A+ R  ++G+ P F   +NPF +M E+ D+++  NFFE RV+ YQ   
Sbjct: 274 VRDMRQYLGYVADSRLQRLGIAPAFG-VKNPFSFM-ELQDVQELTNFFERRVSAYQTAV 330


>gi|297157411|gb|ADI07123.1| ribonucleoside-diphosphate reductase [Streptomyces bingchenggensis
           BCW-1]
          Length = 340

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 74/120 (61%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF   V++ ++ E P L+  E QQ+   ML EA   E+ +A +   +G  G+N
Sbjct: 214 RDETMHMNFAFQVVDTVREEEPELFDDELQQQVTDMLREAVEAELQFARDLCGEGLPGMN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  +ENPF +M E+ ++++  NFFE R + YQ   E
Sbjct: 274 TESMRQYLECVADQRLARLGFAPVYG-SENPFSFM-ELQNVQELTNFFERRASAYQVAVE 331


>gi|289425969|ref|ZP_06427716.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes SK187]
 gi|289153512|gb|EFD02226.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes SK187]
 gi|313763766|gb|EFS35130.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL013PA1]
 gi|313802998|gb|EFS44206.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL110PA2]
 gi|313816916|gb|EFS54630.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL059PA1]
 gi|313829718|gb|EFS67432.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL063PA2]
 gi|313839374|gb|EFS77088.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL086PA1]
 gi|314916474|gb|EFS80305.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL005PA4]
 gi|314932316|gb|EFS96147.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL067PA1]
 gi|314956590|gb|EFT00842.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL027PA1]
 gi|314959472|gb|EFT03574.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL002PA1]
 gi|314964864|gb|EFT08964.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL082PA1]
 gi|314968630|gb|EFT12728.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL037PA1]
 gi|315079174|gb|EFT51177.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL053PA2]
 gi|315100241|gb|EFT72217.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL059PA2]
 gi|315102565|gb|EFT74541.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL046PA1]
 gi|315109517|gb|EFT81493.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL030PA2]
 gi|327455890|gb|EGF02545.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL087PA3]
 gi|327458042|gb|EGF04697.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL083PA2]
 gi|328757204|gb|EGF70820.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL087PA1]
 gi|328757585|gb|EGF71201.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL025PA2]
          Length = 328

 Score = 90.5 bits (223), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 1/120 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +P+G +G+
Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGILGM 263

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA     Y++++A+RR  ++G EP ++   NP  WM+   D  +  NFFE   T Y+  A
Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEYR-VANPAKWMATANDTLQVVNFFEATNTSYEVNA 322


>gi|314918862|gb|EFS82693.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL050PA1]
 gi|314921071|gb|EFS84902.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL050PA3]
          Length = 328

 Score = 90.5 bits (223), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 1/120 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +P+G +G+
Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGILGM 263

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA     Y++++A+RR  ++G EP ++   NP  WM+   D  +  NFFE   T Y+  A
Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEYR-VANPAKWMATANDTLQVVNFFEATNTSYEVNA 322


>gi|50843560|ref|YP_056787.1| ribonucleotide-diphosphate reductase subunit beta
           [Propionibacterium acnes KPA171202]
 gi|282854887|ref|ZP_06264221.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes J139]
 gi|289427904|ref|ZP_06429608.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes J165]
 gi|295131638|ref|YP_003582301.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes SK137]
 gi|50841162|gb|AAT83829.1| ribonucleoside-diphosphate reductase beta chain [Propionibacterium
           acnes KPA171202]
 gi|282582033|gb|EFB87416.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes J139]
 gi|289158787|gb|EFD06987.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes J165]
 gi|291376691|gb|ADE00546.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes SK137]
 gi|313771782|gb|EFS37748.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL074PA1]
 gi|313808408|gb|EFS46875.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL087PA2]
 gi|313810605|gb|EFS48319.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL083PA1]
 gi|313813765|gb|EFS51479.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL025PA1]
 gi|313818171|gb|EFS55885.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL046PA2]
 gi|313821029|gb|EFS58743.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL036PA1]
 gi|313823899|gb|EFS61613.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL036PA2]
 gi|313827161|gb|EFS64875.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL063PA1]
 gi|313831646|gb|EFS69360.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL007PA1]
 gi|313834800|gb|EFS72514.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL056PA1]
 gi|314924366|gb|EFS88197.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL001PA1]
 gi|314927054|gb|EFS90885.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL036PA3]
 gi|314961874|gb|EFT05975.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL002PA2]
 gi|314965892|gb|EFT09991.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL082PA2]
 gi|314974996|gb|EFT19091.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL053PA1]
 gi|314977908|gb|EFT22002.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL045PA1]
 gi|314979603|gb|EFT23697.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL072PA2]
 gi|314981613|gb|EFT25706.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL110PA3]
 gi|314984684|gb|EFT28776.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL005PA1]
 gi|314988338|gb|EFT32429.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL005PA2]
 gi|314990428|gb|EFT34519.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL005PA3]
 gi|315082361|gb|EFT54337.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL078PA1]
 gi|315083809|gb|EFT55785.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL027PA2]
 gi|315087306|gb|EFT59282.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL002PA3]
 gi|315089724|gb|EFT61700.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL072PA1]
 gi|315092253|gb|EFT64229.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL110PA4]
 gi|315094826|gb|EFT66802.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL060PA1]
 gi|315095599|gb|EFT67575.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL038PA1]
 gi|315104692|gb|EFT76668.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL050PA2]
 gi|315107754|gb|EFT79730.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL030PA1]
 gi|327326613|gb|EGE68401.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL096PA3]
 gi|327332877|gb|EGE74609.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL096PA2]
 gi|327335278|gb|EGE76988.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL097PA1]
 gi|327447704|gb|EGE94358.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL043PA2]
 gi|327448579|gb|EGE95233.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL043PA1]
 gi|327449568|gb|EGE96222.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL013PA2]
 gi|328757395|gb|EGF71011.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL020PA1]
 gi|328762002|gb|EGF75508.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL099PA1]
 gi|332676502|gb|AEE73318.1| ribonucleoside-diphosphate reductase subunit beta
           [Propionibacterium acnes 266]
          Length = 328

 Score = 90.1 bits (222), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 1/120 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +P+G +G+
Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGILGM 263

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA     Y++++A+RR  ++G EP ++   NP  WM+   D  +  NFFE   T Y+  A
Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEYRVV-NPAKWMATANDTLQVVNFFEATNTSYEVNA 322


>gi|327328671|gb|EGE70431.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL103PA1]
          Length = 328

 Score = 90.1 bits (222), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 1/120 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +P+G +G+
Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGILGM 263

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA     Y++++A+RR  ++G EP ++   NP  WM+   D  +  NFFE   T Y+  A
Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEYRIV-NPAKWMATANDTLQVVNFFEATNTSYEVNA 322


>gi|88607783|ref|YP_505152.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           phagocytophilum HZ]
 gi|88598846|gb|ABD44316.1| ribonucleoside-diphosphate reductase, beta subunit [Anaplasma
           phagocytophilum HZ]
          Length = 323

 Score = 89.4 bits (220), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 46/120 (38%), Positives = 68/120 (56%), Gaps = 1/120 (0%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60
           RDESLH +  I + N    EN  +W  + +Q+         +LE  +       G V GL
Sbjct: 193 RDESLHTDSIIRLFNTFVHENGEIWDDDLKQELYDACKVIVMLEDEFIDLAFALGDVEGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A   ++Y++FIANRR  Q+ LEP++   ENP PW+ E+++  +  NFFE RVTEY + A
Sbjct: 253 SACEVKRYIRFIANRRLKQLHLEPIYDVAENPLPWLDEILNGVEHTNFFENRVTEYARAA 312


>gi|313793687|gb|EFS41718.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL110PA1]
 gi|327456018|gb|EGF02673.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL092PA1]
          Length = 328

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 69/120 (57%), Gaps = 1/120 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +P+G  G+
Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGIRGM 263

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA     Y++++A+RR  ++G EP ++   NP  WM+   D  +  NFFE   T Y+  A
Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEYR-VANPAKWMATANDTLQVVNFFEATNTSYEVNA 322


>gi|221633388|ref|YP_002522613.1| ribonucleotide-diphosphate reductase subunit beta [Thermomicrobium
           roseum DSM 5159]
 gi|221156578|gb|ACM05705.1| ribonucleoside-diphosphate reductase, beta subunit [Thermomicrobium
           roseum DSM 5159]
          Length = 328

 Score = 88.6 bits (218), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DESLHL+FGI +I  I  E+P + +  F ++ R ++  A  LE AY    +P+  +GL
Sbjct: 207 LKDESLHLSFGIHLITTILEEHPEIMSAAFGRQLRELILRAVELEEAYNRAVLPEPLIGL 266

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +A    +Y+++IA+RR  ++GL P+     NP  WM   +D+ +  NFFE R   Y+ G
Sbjct: 267 DADVLNRYVRYIADRRLEELGL-PIAFGEPNPLRWMVAQVDMPEIVNFFEARNIHYEVG 324


>gi|254449372|ref|ZP_05062814.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium HTCC5015]
 gi|198261018|gb|EDY85321.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium HTCC5015]
          Length = 404

 Score = 88.6 bits (218), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/124 (40%), Positives = 66/124 (53%), Gaps = 3/124 (2%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDE +H +FG+ V  QI  E      +   +  R M  E    E  YA   +    +G 
Sbjct: 284 MRDEVMHASFGLRVARQIMREEN---IQPDPKAMREMWDECEAAEEGYARYLLRDPILGY 340

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A       +FIANRR +++ LE  F   EN  PW+ E  +++KEKNFFETRVTEYQ G 
Sbjct: 341 SAEDHVNQFRFIANRRANKLSLEEPFPGAENALPWLDEQANMRKEKNFFETRVTEYQVGG 400

Query: 121 ELKW 124
            L W
Sbjct: 401 GLTW 404


>gi|190570498|ref|YP_001974856.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Culex quinquefasciatus Pel]
 gi|213019257|ref|ZP_03335064.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Culex quinquefasciatus JHB]
 gi|190356770|emb|CAQ54129.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Culex quinquefasciatus Pel]
 gi|212995366|gb|EEB56007.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Culex quinquefasciatus JHB]
          Length = 329

 Score = 88.2 bits (217), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 1/120 (0%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60
           RDE+LH N  I++ N    EN  +W  EF+++  +       LE  +       G V GL
Sbjct: 193 RDETLHTNSIINLFNTFIKENNEIWNDEFKEELYSACRTIVELEDEFISLAFDLGDVEGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A     Y+++IANRR  Q+GL+ ++   +NP PW+ E+++  +  NFFE RVTEY + A
Sbjct: 253 SAEEVRNYIRYIANRRLTQLGLKSIYNVKDNPIPWLDEILNGVEHTNFFENRVTEYSRAA 312


>gi|29829569|ref|NP_824203.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           avermitilis MA-4680]
 gi|29606677|dbj|BAC70738.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptomyces avermitilis MA-4680]
          Length = 338

 Score = 88.2 bits (217), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 73/124 (58%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  +V++ ++ E P L+  E QQ+   ML EA   E+ +  +    G  G+N
Sbjct: 212 RDETMHMSFAFEVVDTVRKEEPELFDDELQQQVTDMLREAVEAELQFGRDLCGDGLPGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 272 TESMRQYLECVADQRLQRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRASAYQVAVE 329

Query: 122 LKWD 125
              D
Sbjct: 330 GTVD 333


>gi|126664354|ref|ZP_01735338.1| Ribonucleotide reductase, beta subunit [Marinobacter sp. ELB17]
 gi|126630680|gb|EBA01294.1| Ribonucleotide reductase, beta subunit [Marinobacter sp. ELB17]
          Length = 352

 Score = 88.2 bits (217), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 74/125 (59%), Gaps = 5/125 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKS-RTMLHEATLLEIAYAHETMPKGFVG 59
           +RDE++H +FG+ V+NQI +E  ++    F  K+ R M  E+   E  YA+  +    +G
Sbjct: 232 LRDEAMHFSFGLKVVNQI-LEEENI---SFDPKAVRDMWDESEAAESDYANYILRDPILG 287

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
            +A    +  +F+ANRR   + L   F   +N  PW+ E   ++KEKNFFETRV EYQ G
Sbjct: 288 YSAEYHIEQFRFVANRRARTVNLPEPFPGAKNVSPWLEEQATMRKEKNFFETRVIEYQTG 347

Query: 120 AELKW 124
           A+L+W
Sbjct: 348 AQLEW 352


>gi|91763118|ref|ZP_01265082.1| ribonucleotide-diphosphate reductase beta subunit [Candidatus
           Pelagibacter ubique HTCC1002]
 gi|91717531|gb|EAS84182.1| ribonucleotide-diphosphate reductase beta subunit [Candidatus
           Pelagibacter ubique HTCC1002]
          Length = 342

 Score = 88.2 bits (217), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQ----QKSRTML-HEATLLEIAYAHETMPK 55
           +RDE+LH N  I +  +   ENP +WT E +    +  RT++ HE   +++A+    M  
Sbjct: 212 VRDETLHCNSMIRLFKEFIHENPEIWTPELKAELYKACRTIIEHEDAFIDLAFEMGPMQ- 270

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL A   + Y++FIANRR  Q+GLEP++   +NP  W+  +++  +  NFFE R TE
Sbjct: 271 ---GLTAQDVKLYIRFIANRRLSQLGLEPIYDVDKNPLTWLDSMLNAVEHMNFFEGRSTE 327

Query: 116 YQQGA 120
           Y + A
Sbjct: 328 YSKAA 332


>gi|58700135|ref|ZP_00374651.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila ananassae]
 gi|58533347|gb|EAL57830.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila ananassae]
          Length = 225

 Score = 88.2 bits (217), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 1/120 (0%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60
           RDE+LH N  I + N    EN  +W  EF+++  +       LE  +       G V GL
Sbjct: 105 RDETLHTNSIIMLFNTFIKENNEIWDNEFKEELYSACRTIVELEDEFIKLAFDLGDVEGL 164

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A     Y++++ANRR  Q+GLE ++   +NP PW+ E+++  +  NFFE RVTEY + A
Sbjct: 165 SAEEVRNYIRYVANRRLMQLGLESIYDVNDNPIPWLDEILNGVEHTNFFENRVTEYSRAA 224


>gi|71083845|ref|YP_266565.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Pelagibacter ubique HTCC1062]
 gi|71062958|gb|AAZ21961.1| ribonucleoside-diphosphate reductase beta chain [Candidatus
           Pelagibacter ubique HTCC1062]
          Length = 337

 Score = 87.8 bits (216), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQ----QKSRTML-HEATLLEIAYAHETMPK 55
           +RDE+LH N  I +  +   ENP +WT E +    +  RT++ HE   +++A+    M  
Sbjct: 207 VRDETLHCNSMIRLFKEFIHENPEIWTPELKAELYKACRTIIEHEDAFIDLAFEMGPMQ- 265

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL A   + Y++FIANRR  Q+GLEP++   +NP  W+  +++  +  NFFE R TE
Sbjct: 266 ---GLTAQDVKLYIRFIANRRLSQLGLEPIYDVDKNPLTWLDSMLNAVEHMNFFEGRSTE 322

Query: 116 YQQGA 120
           Y + A
Sbjct: 323 YSKAA 327


>gi|329939692|ref|ZP_08288993.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           griseoaurantiacus M045]
 gi|329301262|gb|EGG45157.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           griseoaurantiacus M045]
          Length = 347

 Score = 87.8 bits (216), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 73/120 (60%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+ +E  ++   ML EA   E+ +A +    G  G+N
Sbjct: 221 RDETMHMSFAFDVVDTVRKEEPGLFDEELGRQVTDMLREAVEAELQFARDLCGDGLPGMN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY+Q +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 281 TESMRQYLQCVADQRLVRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRASAYQVAVE 338


>gi|317122809|ref|YP_004102812.1| ribonucleoside-diphosphate reductase [Thermaerobacter marianensis
           DSM 12885]
 gi|315592789|gb|ADU52085.1| Ribonucleoside-diphosphate reductase [Thermaerobacter marianensis
           DSM 12885]
          Length = 336

 Score = 87.8 bits (216), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 72/121 (59%), Gaps = 1/121 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DESLHL+FGI +I  +  E+P L T EF ++ + ++  A  LE  Y    +P+  +G+
Sbjct: 214 LKDESLHLSFGIHLITTLLEEHPELMTPEFAREVKGLILRAVELERDYNRALLPRPILGV 273

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A     Y++++ +RR  ++GL P F  T NP  WM+  +D+ +  NFFE R   Y+  A
Sbjct: 274 SADYLNAYIEYVTDRRLDELGLGPHFG-TPNPAQWMATEVDVPEIVNFFEARNIHYEVAA 332

Query: 121 E 121
           +
Sbjct: 333 D 333


>gi|254455551|ref|ZP_05068980.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus
           Pelagibacter sp. HTCC7211]
 gi|207082553|gb|EDZ59979.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus
           Pelagibacter sp. HTCC7211]
          Length = 335

 Score = 87.8 bits (216), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWT----KEFQQKSRTML-HEATLLEIAYAHETMPK 55
           +RDE+LH N  I +  +   ENP +WT    KE  +  RT++ HE   +++A+    M  
Sbjct: 205 VRDETLHCNSMIRIFKEFINENPEIWTPKLKKELYEACRTIIAHEDAFIDLAFEMGPME- 263

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL A   + Y++FI NRR  Q+GLEP++   +NP  W+  +++  +  NFFE R TE
Sbjct: 264 ---GLTAQEVKDYIRFIGNRRLTQLGLEPIYDVDKNPLGWLDTMLNAVEHMNFFEGRATE 320

Query: 116 YQQGA 120
           Y + +
Sbjct: 321 YSKAS 325


>gi|297202281|ref|ZP_06919678.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sviceus ATCC 29083]
 gi|197710199|gb|EDY54233.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sviceus ATCC 29083]
          Length = 340

 Score = 87.8 bits (216), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 73/124 (58%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+    QQ+   ML EA   E+ +A +    G  G+N
Sbjct: 214 RDETMHMSFAFDVVDTVRKEEPELFDDRLQQQVTDMLAEAVEAELQFARDLCGDGLPGMN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 274 TESMRQYLECVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 331

Query: 122 LKWD 125
              D
Sbjct: 332 GTVD 335


>gi|258542157|ref|YP_003187590.1| ribonucleotide-diphosphate reductase subunit beta [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256633235|dbj|BAH99210.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256636294|dbj|BAI02263.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256639347|dbj|BAI05309.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256642403|dbj|BAI08358.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256645458|dbj|BAI11406.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256648511|dbj|BAI14452.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256651564|dbj|BAI17498.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256654555|dbj|BAI20482.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 339

 Score = 87.8 bits (216), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 73/125 (58%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTML-HEATLLEIAYAHETMPK 55
           +RDE+LH    I +      ENP LWT++ + +     RT++ HE   +++A+    +  
Sbjct: 204 VRDETLHCLSIIRLFRVFIQENPELWTEQLRTELTDICRTIVEHEEAFIDLAFEMGAVE- 262

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GLNA   + Y+ FIA+RR  Q+GLEP++  T NP PW+ ++++  +  NFFE R TE
Sbjct: 263 ---GLNAEQVKTYIHFIADRRLTQLGLEPIYNTTTNPLPWLDDMLNAVEHTNFFENRATE 319

Query: 116 YQQGA 120
           Y + +
Sbjct: 320 YSRAS 324


>gi|42520108|ref|NP_966023.1| ribonucleotide-diphosphate reductase subunit beta [Wolbachia
           endosymbiont of Drosophila melanogaster]
 gi|58696705|ref|ZP_00372253.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila simulans]
 gi|58698234|ref|ZP_00373154.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila ananassae]
 gi|225630036|ref|YP_002726827.1| ribonucleotide-diphosphate reductase beta subunit [Wolbachia sp.
           wRi]
 gi|42409845|gb|AAS13957.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila melanogaster]
 gi|58535261|gb|EAL59340.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila ananassae]
 gi|58537117|gb|EAL60231.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila simulans]
 gi|225592017|gb|ACN95036.1| ribonucleotide-diphosphate reductase beta subunit [Wolbachia sp.
           wRi]
          Length = 329

 Score = 87.4 bits (215), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 1/120 (0%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60
           RDE+LH N  I + N    EN  +W  EF+++  +       LE  +       G V GL
Sbjct: 193 RDETLHTNSIIMLFNTFIKENNEIWDNEFKEELYSACRTIVELEDEFIKLAFDLGDVEGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A     Y++++ANRR  Q+GLE ++   +NP PW+ E+++  +  NFFE RVTEY + A
Sbjct: 253 SAEEVRNYIRYVANRRLMQLGLESIYDVNDNPIPWLDEILNGVEHTNFFENRVTEYSRAA 312


>gi|294631326|ref|ZP_06709886.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. e14]
 gi|292834659|gb|EFF93008.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. e14]
          Length = 339

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+  + +Q+   ML EA   E+ +A +    G  G+N
Sbjct: 213 RDETMHMSFAFDVVDTVRKEEPDLFDDQLEQQVTDMLREAVEAELQFARDLCGDGLPGMN 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 273 TDSMRQYLECVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 330

Query: 122 LKWD 125
              D
Sbjct: 331 GTVD 334


>gi|88861512|ref|ZP_01136127.1| ribonucleotide-diphosphate reductase beta subunit
           [Pseudoalteromonas tunicata D2]
 gi|88816487|gb|EAR26327.1| ribonucleotide-diphosphate reductase beta subunit
           [Pseudoalteromonas tunicata D2]
          Length = 219

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWT----KEFQQKSRTML-HEATLLEIAYAHETMPK 55
           +RDE+LH N  I +  +   ENP +WT    KE  +  R ++ HE   +++A+    M  
Sbjct: 89  VRDETLHCNSMIRIFKEFIKENPEIWTPTLKKELYEACRIIVEHEDAFIDLAFEMGPME- 147

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL A   + Y++FIANRR  Q+GLEP++   +NP  W+  +++  +  NFFE R TE
Sbjct: 148 ---GLTAQEVKDYIRFIANRRLIQLGLEPIYDVQKNPLTWLDTMLNAVEHMNFFEGRATE 204

Query: 116 YQQGA 120
           Y + +
Sbjct: 205 YSKAS 209


>gi|239947951|ref|ZP_04699704.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsia
           endosymbiont of Ixodes scapularis]
 gi|239922227|gb|EER22251.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsia
           endosymbiont of Ixodes scapularis]
          Length = 327

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 72/125 (57%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55
           +RDE+LH N  I +     IENP +WT+  +++      T++H E   +E+A+       
Sbjct: 189 VRDETLHTNSIITLFKTFVIENPEVWTETLRKRIYEACTTIVHFEDAFIELAFE----VG 244

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
           G  GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TE
Sbjct: 245 GIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATE 304

Query: 116 YQQGA 120
           Y + A
Sbjct: 305 YSKAA 309


>gi|256825983|ref|YP_003149943.1| ribonucleotide reductase subunit beta [Kytococcus sedentarius DSM
           20547]
 gi|256689376|gb|ACV07178.1| ribonucleotide reductase, beta subunit [Kytococcus sedentarius DSM
           20547]
          Length = 365

 Score = 87.0 bits (214), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F  +V+  ++ E P L+  E   + R ML EA   E  +A + +  G  GL+
Sbjct: 239 RDESMHMAFAFEVVETVRSEEPDLFDAEMAGQVRQMLMEAVDAEAQFAEDLLGMGVAGLS 298

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                 Y++ +A+RR  Q+G+  ++  T+NP  +M E+ D+++  NFFE RV+ YQ G E
Sbjct: 299 VADMRAYLENVADRRAVQLGMPEIYG-TKNPLAFM-ELQDVQELSNFFERRVSAYQVGVE 356


>gi|329113329|ref|ZP_08242110.1| Ribonucleoside-diphosphate reductase subunit beta [Acetobacter
           pomorum DM001]
 gi|326697154|gb|EGE48814.1| Ribonucleoside-diphosphate reductase subunit beta [Acetobacter
           pomorum DM001]
          Length = 339

 Score = 87.0 bits (214), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 73/125 (58%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTML-HEATLLEIAYAHETMPK 55
           +RDE+LH    I +      ENP LWT++ + +     RT++ HE   +++A+    +  
Sbjct: 204 VRDETLHCLSIIRLFRVFIQENPELWTEQLRTELTDICRTIVEHEEAFIDLAFEMGAVE- 262

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GLNA   + Y+ FIA+RR  Q+GLEP++  T NP PW+ ++++  +  NFFE R TE
Sbjct: 263 ---GLNAEQVKTYIHFIADRRLTQLGLEPIYNTTTNPLPWLDDMLNAVEHTNFFENRSTE 319

Query: 116 YQQGA 120
           Y + +
Sbjct: 320 YSRAS 324


>gi|302554045|ref|ZP_07306387.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           viridochromogenes DSM 40736]
 gi|302471663|gb|EFL34756.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           viridochromogenes DSM 40736]
          Length = 341

 Score = 87.0 bits (214), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+  + +Q+   ML EA   E+ +A +    G  G+N
Sbjct: 215 RDETMHMSFAFDVVDTVRKEEPELFDDQLRQEVTDMLREAVEAELQFARDLCGDGLPGMN 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 275 TESMRQYLECVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 332

Query: 122 LKWD 125
              D
Sbjct: 333 GTVD 336


>gi|239982206|ref|ZP_04704730.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           albus J1074]
 gi|291454052|ref|ZP_06593442.1| ribonucleotide-diphosphate reductase subunit small [Streptomyces
           albus J1074]
 gi|291357001|gb|EFE83903.1| ribonucleotide-diphosphate reductase subunit small [Streptomyces
           albus J1074]
          Length = 350

 Score = 86.7 bits (213), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 74/120 (61%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+  + Q++   ML EA   E+ +A +    G  G+N
Sbjct: 224 RDETMHMSFAFDVVDTVRKEEPELFDDKLQEQVVAMLKEAVEAELQFARDLCGDGLPGMN 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE RV+ YQ   E
Sbjct: 284 TESMREYLECVADQRLTRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFERRVSAYQVAVE 341


>gi|99036000|ref|ZP_01315041.1| hypothetical protein Wendoof_01000112 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 329

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 1/120 (0%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60
           RDE+LH N  I + N    EN  +W  EF+++  +       LE  +       G V GL
Sbjct: 193 RDETLHTNSIIMLFNTFIKENNEIWDNEFKEELYSACRTIVELEDEFIKLAFDLGDVEGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A     Y++++ANRR  Q+GLE ++   +NP PW+ E+++  +  NFFE RVTEY + A
Sbjct: 253 SAEEVRNYIRYVANRRLMQLGLESIYDVNDNPTPWLDEILNGVEHTNFFENRVTEYSRAA 312


>gi|225677302|ref|ZP_03788281.1| ribonucleotide-diphosphate reductase beta [Wolbachia endosymbiont
           of Muscidifurax uniraptor]
 gi|225590665|gb|EEH11913.1| ribonucleotide-diphosphate reductase beta [Wolbachia endosymbiont
           of Muscidifurax uniraptor]
          Length = 329

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 1/120 (0%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60
           RDE+LH N  I + N    EN  +W  EF+++  +       LE  +       G V GL
Sbjct: 193 RDETLHTNSIIMLFNTFIKENNEIWDDEFKEELYSACRTIVELEDEFIKLAFDFGDVEGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A     Y+ ++ANRR  Q+GLE ++   +NP PW+ E+++  +  NFFE RVTEY + A
Sbjct: 253 SAEEVRNYIHYVANRRLMQLGLESIYDVNDNPIPWLDEILNGVEHTNFFENRVTEYSRAA 312


>gi|110802082|ref|YP_699620.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           perfringens SM101]
 gi|110682583|gb|ABG85953.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens SM101]
          Length = 344

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 69/123 (56%), Gaps = 2/123 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I ++K E P ++TKE +++ R M+      EIA+ H  +     G+N
Sbjct: 218 RDENTHLWLFRSIIKELKEEIPEVFTKELKEELREMMRTGVEHEIAWGHYVIGDNVTGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y+++I N R   IGLEPLF+ Y ENP PW+    D  + K +FFE + T Y + 
Sbjct: 278 KNLIERYIKYIGNLRAKAIGLEPLFEGYNENPAPWVDYYADANQVKTDFFEAKSTAYAKA 337

Query: 120 AEL 122
             L
Sbjct: 338 GAL 340


>gi|307328555|ref|ZP_07607729.1| Ribonucleoside-diphosphate reductase [Streptomyces violaceusniger
           Tu 4113]
 gi|306885823|gb|EFN16835.1| Ribonucleoside-diphosphate reductase [Streptomyces violaceusniger
           Tu 4113]
          Length = 340

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 72/120 (60%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F   V++ ++ E P L+  E +Q+   ML EA   E+ +A +    G  G+N
Sbjct: 214 RDESMHMEFAFSVVDTVREEEPDLFDDELRQQVTDMLKEAVEAELQFARDLCGDGLPGMN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S ++Y+Q +A++R  ++G   +F  +ENPF +M E+ ++++  NFFE R + YQ   E
Sbjct: 274 TASMQEYLQCVADQRLMRLGFPAVFG-SENPFSFM-ELQNVQELTNFFERRASAYQVAVE 331


>gi|302558498|ref|ZP_07310840.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           griseoflavus Tu4000]
 gi|302476116|gb|EFL39209.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           griseoflavus Tu4000]
          Length = 341

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+ ++  Q+   ML EA   E+ +A +    G  G+N
Sbjct: 215 RDETMHMSFAFDVVDTVRKEEPELFDEQLGQQVTAMLREAVEAELQFARDLCGDGLPGMN 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 275 TESMRQYLECVADQRLVRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 332

Query: 122 LKWD 125
              D
Sbjct: 333 GTVD 336


>gi|313836278|gb|EFS73992.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL037PA2]
 gi|314928743|gb|EFS92574.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL044PA1]
 gi|314971220|gb|EFT15318.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL037PA3]
 gi|328906508|gb|EGG26283.1| ribonucleotide-diphosphate reductase subunit beta
           [Propionibacterium sp. P08]
          Length = 324

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 71/120 (59%), Gaps = 5/120 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +P+G  G+
Sbjct: 204 VRDESLHLKFGMNLILTVLEENPDIATDEFAVEIHDMILKGVEMEAQYNRDMLPRGIPGM 263

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA     Y++++A+RR  ++GLEP + +  NP  WM+   D  +  NFFET  T Y+  A
Sbjct: 264 NA----DYVKYLADRRLEELGLEPEY-HVANPAKWMATANDTLQLVNFFETTNTSYEVNA 318


>gi|254388985|ref|ZP_05004216.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           clavuligerus ATCC 27064]
 gi|294814921|ref|ZP_06773564.1| Ribonucleoside-diphosphate reductase beta chain protein
           [Streptomyces clavuligerus ATCC 27064]
 gi|326443293|ref|ZP_08218027.1| Ribonucleoside-diphosphate reductase [Streptomyces clavuligerus
           ATCC 27064]
 gi|197702703|gb|EDY48515.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           clavuligerus ATCC 27064]
 gi|218078699|emb|CAB90708.3| class Ia ribonucleotide-diphosphate reductase small subunit chain
           [Streptomyces clavuligerus ATCC 27064]
 gi|294327520|gb|EFG09163.1| Ribonucleoside-diphosphate reductase beta chain protein
           [Streptomyces clavuligerus ATCC 27064]
          Length = 339

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 73/124 (58%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ ++ +    G  G+N
Sbjct: 213 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLKEAVEAELQFSRDLCGDGLPGMN 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y+Q +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 273 TESMREYLQCVADQRLARLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 330

Query: 122 LKWD 125
              D
Sbjct: 331 GSVD 334


>gi|296116311|ref|ZP_06834927.1| ribonucleotide-diphosphate reductase subunit beta
           [Gluconacetobacter hansenii ATCC 23769]
 gi|295977130|gb|EFG83892.1| ribonucleotide-diphosphate reductase subunit beta
           [Gluconacetobacter hansenii ATCC 23769]
          Length = 334

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 1/121 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDE+LH      +      ENP +WT++ Q   R +  +    E A+   +   G V G
Sbjct: 204 VRDETLHCVSMARLFRVFVQENPEIWTQKLQDDIRQICRDIVEHEDAFIDLSFEMGPVEG 263

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L+A   ++Y++F+ANRR  Q+GL+ L+    NP PW+ E+++  +  NFFE R TEY + 
Sbjct: 264 LDAAQVKRYIRFVANRRLGQLGLDGLYDVATNPLPWVDEMVNAVEHANFFENRSTEYSRA 323

Query: 120 A 120
           A
Sbjct: 324 A 324


>gi|330994651|ref|ZP_08318574.1| putative ribonucleoside-diphosphate reductase small subunit
           [Gluconacetobacter sp. SXCC-1]
 gi|329758292|gb|EGG74813.1| putative ribonucleoside-diphosphate reductase small subunit
           [Gluconacetobacter sp. SXCC-1]
          Length = 365

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH +    +      ENP +WT   +   R +  +    E A+   +   G V G
Sbjct: 234 VRDESLHCDSMARLFRVFVQENPEIWTDTLRDDIRQICRDIVEHEDAFIDLSFEMGAVEG 293

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L+A   ++Y++F+ANRR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TEY + 
Sbjct: 294 LDAGQVKRYIRFVANRRLGQLGLDGIYDIATNPLPWVDEMVNAVEHANFFENRATEYSRA 353

Query: 120 AEL-KWD 125
           +    WD
Sbjct: 354 STTGTWD 360


>gi|302542646|ref|ZP_07294988.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302460264|gb|EFL23357.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           himastatinicus ATCC 53653]
          Length = 343

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 71/120 (59%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F   V++ ++ E P L+  + +++   ML EA   E+ +AH+    G  G+N
Sbjct: 217 RDESMHMEFAFSVVDTVREEEPDLFDDDLERQVTDMLKEAVEAELQFAHDLCGDGLPGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S   Y++ +A++R  ++G   +F  +ENPF +M E+ D+++  NFFE R + YQ   E
Sbjct: 277 TESMRAYLECVADQRLARLGFPAVFG-SENPFSFM-ELQDVQELTNFFERRASAYQVAVE 334


>gi|328950373|ref|YP_004367708.1| Ribonucleoside-diphosphate reductase [Marinithermus hydrothermalis
           DSM 14884]
 gi|328450697|gb|AEB11598.1| Ribonucleoside-diphosphate reductase [Marinithermus hydrothermalis
           DSM 14884]
          Length = 332

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 70/119 (58%), Gaps = 1/119 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DESLHL+FG+ +I     E   + T    ++ R ++ EA  LE AY    +P+  +GL
Sbjct: 211 LKDESLHLSFGLHLITGFLEEYSEVMTPRLAREVRGLILEAVQLERAYNQALLPRPILGL 270

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +A +   Y++++A+RR  ++GLE  F  T NP  WM+  +D+ +  NFFE   T Y+ G
Sbjct: 271 SAETLNAYVEYVADRRLEELGLEAAFG-TPNPAKWMATEVDVPEIVNFFEAVNTSYEVG 328


>gi|313903043|ref|ZP_07836438.1| Ribonucleoside-diphosphate reductase [Thermaerobacter subterraneus
           DSM 13965]
 gi|313466767|gb|EFR62286.1| Ribonucleoside-diphosphate reductase [Thermaerobacter subterraneus
           DSM 13965]
          Length = 336

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 71/121 (58%), Gaps = 1/121 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DESLHL+FGI +I  +  E+P L T  F ++ + ++  A  LE  Y    +P+  +G+
Sbjct: 214 LKDESLHLSFGIHLITALLEEHPELMTPAFAREVKGLILRAVELERDYNRALLPRPILGV 273

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A     Y++++ +RR  ++GL P F  T NP  WM+  +D+ +  NFFE R   Y+  A
Sbjct: 274 SADYLNAYVEYVTDRRLDELGLGPHFG-TPNPAKWMATEVDVPEIVNFFEARNIHYEVAA 332

Query: 121 E 121
           +
Sbjct: 333 D 333


>gi|18311342|ref|NP_563276.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           perfringens str. 13]
 gi|110801267|ref|YP_697050.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           perfringens ATCC 13124]
 gi|168205189|ref|ZP_02631194.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens E str. JGS1987]
 gi|168210336|ref|ZP_02635961.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens B str. ATCC 3626]
 gi|168213271|ref|ZP_02638896.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens CPE str. F4969]
 gi|168216675|ref|ZP_02642300.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens NCTC 8239]
 gi|169347055|ref|ZP_02865997.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens C str. JGS1495]
 gi|182625797|ref|ZP_02953564.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens D str. JGS1721]
 gi|18146026|dbj|BAB82066.1| ribonucleoside-diphosphate reductase beta subunit [Clostridium
           perfringens str. 13]
 gi|110675914|gb|ABG84901.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens ATCC 13124]
 gi|169296738|gb|EDS78867.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens C str. JGS1495]
 gi|170663363|gb|EDT16046.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens E str. JGS1987]
 gi|170711548|gb|EDT23730.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens B str. ATCC 3626]
 gi|170715235|gb|EDT27417.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens CPE str. F4969]
 gi|177908953|gb|EDT71440.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens D str. JGS1721]
 gi|182381151|gb|EDT78630.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens NCTC 8239]
          Length = 344

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 69/123 (56%), Gaps = 2/123 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I ++K E P ++TKE +++ R M+      EIA+ H  +     G+N
Sbjct: 218 RDENTHLWLFRSIIKELKEEIPEVFTKELKEELREMVRTGVEHEIAWGHYVIGDNVTGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y+++I N R   IGLEPLF+ Y ENP PW+    D  + K +FFE + T Y + 
Sbjct: 278 KNLIERYIKYIGNLRVKAIGLEPLFEGYNENPAPWVDYYADANQVKTDFFEAKSTAYAKA 337

Query: 120 AEL 122
             L
Sbjct: 338 GAL 340


>gi|21223593|ref|NP_629372.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           coelicolor A3(2)]
 gi|7328345|emb|CAB82486.1| class I ribonucleotide-diphosphate reductase small subunit chain
           [Streptomyces coelicolor A3(2)]
 gi|8546891|emb|CAB94610.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           coelicolor A3(2)]
          Length = 343

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+  + +++   ML EA   E+ +A +    G  G+N
Sbjct: 217 RDETMHMSFAFDVVDTVRKEEPELFDDQLREQVTDMLREAVEAELQFARDLCGDGLPGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 277 TDSMRQYLECVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 334

Query: 122 LKWD 125
              D
Sbjct: 335 GTVD 338


>gi|256785295|ref|ZP_05523726.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           lividans TK24]
 gi|289769189|ref|ZP_06528567.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           lividans TK24]
 gi|289699388|gb|EFD66817.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           lividans TK24]
          Length = 343

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+  + +++   ML EA   E+ +A +    G  G+N
Sbjct: 217 RDETMHMSFAFDVVDTVRKEEPELFDDQLREQVTDMLREAVEAELQFARDLCGDGLPGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 277 TDSMRQYLECVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 334

Query: 122 LKWD 125
              D
Sbjct: 335 GTVD 338


>gi|295836584|ref|ZP_06823517.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. SPB74]
 gi|197697282|gb|EDY44215.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. SPB74]
          Length = 345

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 72/120 (60%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+  E +Q+ + ML  A   E+ +A +    G  G+N
Sbjct: 219 RDETMHMSFAFDVVDTVRKEEPELFDAELEQEVKDMLDGAVNAELQFARDLCGDGLPGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y+Q +A++R  ++G  P++  + NPF +M E+  +++  NFFE R + YQ   E
Sbjct: 279 TESMREYLQCVADQRLQRLGFAPVYG-SSNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 336


>gi|42523460|ref|NP_968840.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio
           bacteriovorus HD100]
 gi|39575666|emb|CAE79833.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio
           bacteriovorus HD100]
          Length = 336

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 71/119 (59%), Gaps = 2/119 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F I+V+   + E P L+ ++ +     ML +A   E+ +AH+ +  G  GL+
Sbjct: 210 RDESMHMAFAIEVVKTARKEEPELFNQQMEDMVVQMLEDAIECEMEFAHDVLNLGVAGLS 269

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY+++ A++R   + + P +   +NPF +M E+ D+++  NFFE RV+ YQ G 
Sbjct: 270 AKDMRQYLEYCADQRLESLNIAPRYN-VKNPFIFM-ELQDMQELANFFERRVSAYQTGV 326


>gi|297192180|ref|ZP_06909578.1| ribonucleoside-diphosphate reductase subunit beta protein
           [Streptomyces pristinaespiralis ATCC 25486]
 gi|197720175|gb|EDY64083.1| ribonucleoside-diphosphate reductase subunit beta protein
           [Streptomyces pristinaespiralis ATCC 25486]
          Length = 340

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 73/120 (60%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+  E +Q+   ML EA   E+ +  +   +G  G+N
Sbjct: 214 RDETMHMNFAFEVVDTVRKEEPELFDDELRQQVTDMLKEAVEAELQFGRDLCGEGLPGMN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y+Q +A++R  ++G  P++  ++NPF +M E+  +++  NFFE R + YQ   E
Sbjct: 274 TESMREYLQCVADQRLTRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 331


>gi|328884923|emb|CCA58162.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Streptomyces venezuelae ATCC 10712]
          Length = 338

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 72/124 (58%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+    +Q+   ML EA   E+ +  +    G  G+N
Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPELFDDALRQQVTDMLKEAVEAELQFGRDLCGDGLPGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y+Q +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 272 TESMREYLQCVADQRLQRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329

Query: 122 LKWD 125
              D
Sbjct: 330 GSVD 333


>gi|209966751|ref|YP_002299666.1| ribonucleotide-diphosphate reductase subunit beta [Rhodospirillum
           centenum SW]
 gi|209960217|gb|ACJ00854.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodospirillum
           centenum SW]
          Length = 322

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 77/131 (58%), Gaps = 10/131 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55
           +RDE+LH    I +      ENP +WT+ FQ++      T++H E   +++A+  E  P 
Sbjct: 191 VRDETLHTLSMIKLFRTFVNENPQVWTEAFQRELTVCCETIVHHEDAFIDLAF--EMGPV 248

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              G+ A   ++Y+++IA+RR  Q+GLEP+++  +NP PWM  +++  +  NFFE R TE
Sbjct: 249 E--GMTAEDVKRYIRWIADRRLGQLGLEPVYRIEKNPLPWMDAILNGIEHTNFFENRATE 306

Query: 116 YQQGAEL-KWD 125
           Y + A    WD
Sbjct: 307 YSKAATRGTWD 317


>gi|239944172|ref|ZP_04696109.1| putative ribonucleoside-diphosphate reductase small subunit
           [Streptomyces roseosporus NRRL 15998]
 gi|239990628|ref|ZP_04711292.1| putative ribonucleoside-diphosphate reductase small subunit
           [Streptomyces roseosporus NRRL 11379]
 gi|291447643|ref|ZP_06587033.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           roseosporus NRRL 15998]
 gi|291350590|gb|EFE77494.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           roseosporus NRRL 15998]
          Length = 338

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 71/120 (59%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+  E QQ+   ML EA   E+ +  +   +G  G+N
Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPDLFDDELQQQVTDMLKEAVEAELQFGRDLCGEGLPGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P    +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 272 TESMRQYLECVADQRLARLGF-PTVYGSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329


>gi|239929012|ref|ZP_04685965.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           ghanaensis ATCC 14672]
          Length = 339

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 73/124 (58%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+ +   Q+   ML EA   E+ +A +    G  G+N
Sbjct: 213 RDETMHMSFAFDVVDTVRKEEPELFDERLGQQVTDMLREAVEAELQFARDLCGDGLPGMN 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE R + YQ   E
Sbjct: 273 TESMRQYLECVADQRLTRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 330

Query: 122 LKWD 125
              D
Sbjct: 331 GTVD 334


>gi|291437353|ref|ZP_06576743.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           ghanaensis ATCC 14672]
 gi|291340248|gb|EFE67204.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           ghanaensis ATCC 14672]
          Length = 340

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 73/124 (58%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+ +   Q+   ML EA   E+ +A +    G  G+N
Sbjct: 214 RDETMHMSFAFDVVDTVRKEEPELFDERLGQQVTDMLREAVEAELQFARDLCGDGLPGMN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE R + YQ   E
Sbjct: 274 TESMRQYLECVADQRLTRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 331

Query: 122 LKWD 125
              D
Sbjct: 332 GTVD 335


>gi|114327552|ref|YP_744709.1| ribonucleotide-diphosphate reductase subunit beta [Granulibacter
           bethesdensis CGDNIH1]
 gi|114315726|gb|ABI61786.1| ribonucleoside-diphosphate reductase beta chain [Granulibacter
           bethesdensis CGDNIH1]
          Length = 339

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 74/127 (58%), Gaps = 9/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTML-----HEATLLEIAYAHETMPK 55
           +RDE+LH    I + +    EN  +WT++ +Q+ R +      HE   +++A+   ++  
Sbjct: 209 VRDETLHCLSIIKLFHVFIDENREIWTEDLRQEIRQICATIVEHEDAFIDLAFELGSVE- 267

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL+A   + Y+++IA+RR  Q+GLEPLF    NP PW+ ++++  +  NFFE R TE
Sbjct: 268 ---GLDAAQVKSYIRYIADRRLIQLGLEPLFHVERNPLPWIDDMLNAVEHANFFENRATE 324

Query: 116 YQQGAEL 122
           Y + + +
Sbjct: 325 YSRASTV 331


>gi|157964544|ref|YP_001499368.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           massiliae MTU5]
 gi|157844320|gb|ABV84821.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia
           massiliae MTU5]
          Length = 336

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55
           +RDE+LH N  I +      ENP +WT+  +++      T++H E   +E+A+       
Sbjct: 190 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFE----VG 245

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
           G  GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TE
Sbjct: 246 GIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATE 305

Query: 116 YQQGA 120
           Y + A
Sbjct: 306 YSKAA 310


>gi|15892574|ref|NP_360288.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           conorii str. Malish 7]
 gi|34580440|ref|ZP_00141920.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia
           sibirica 246]
 gi|157828524|ref|YP_001494766.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           rickettsii str. 'Sheila Smith']
 gi|165933242|ref|YP_001650031.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           rickettsii str. Iowa]
 gi|229586746|ref|YP_002845247.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           africae ESF-5]
 gi|238650260|ref|YP_002916112.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           peacockii str. Rustic]
 gi|15619738|gb|AAL03189.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia conorii
           str. Malish 7]
 gi|28261825|gb|EAA25329.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia
           sibirica 246]
 gi|157801005|gb|ABV76258.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           rickettsii str. 'Sheila Smith']
 gi|165908329|gb|ABY72625.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia
           rickettsii str. Iowa]
 gi|228021796|gb|ACP53504.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia africae
           ESF-5]
 gi|238624358|gb|ACR47064.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           peacockii str. Rustic]
          Length = 328

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55
           +RDE+LH N  I +      ENP +WT+  +++      T++H E   +E+A+       
Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFE----VG 244

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
           G  GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TE
Sbjct: 245 GIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRTTE 304

Query: 116 YQQGA 120
           Y + A
Sbjct: 305 YSKAA 309


>gi|157825769|ref|YP_001493489.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia akari
           str. Hartford]
 gi|157799727|gb|ABV74981.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia akari
           str. Hartford]
          Length = 327

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55
           +RDE+LH N  I +      ENP +WT+  +++      T++H E   +E+A+       
Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFE----VG 244

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
           G  GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TE
Sbjct: 245 GIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATE 304

Query: 116 YQQGA 120
           Y + A
Sbjct: 305 YSKAA 309


>gi|282861024|ref|ZP_06270089.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. ACTE]
 gi|282563682|gb|EFB69219.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. ACTE]
          Length = 340

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 71/120 (59%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ +  +   +G  G+N
Sbjct: 214 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLREAVEAELQFGRDLCGEGLPGMN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G   L+  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 274 TESMRQYLECVADQRLTRLGFPALYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 331


>gi|157803769|ref|YP_001492318.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           canadensis str. McKiel]
 gi|157785032|gb|ABV73533.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           canadensis str. McKiel]
          Length = 324

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55
           +RDE+LH N  I +      ENP +WT+  +++      T++H E   +E+A+       
Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYGACTTIVHFEDAFIELAFE----VG 244

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
           G  GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TE
Sbjct: 245 GIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATE 304

Query: 116 YQQGA 120
           Y + A
Sbjct: 305 YSKAA 309


>gi|31322342|gb|AAP15464.1| ribonucleotide reductase small subunit [Rickettsia rickettsii str.
           'Sheila Smith']
          Length = 336

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55
           +RDE+LH N  I +      ENP +WT+  +++      T++H E   +E+A+       
Sbjct: 197 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFE----VG 252

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
           G  GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TE
Sbjct: 253 GIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRTTE 312

Query: 116 YQQGA 120
           Y + A
Sbjct: 313 YSKAA 317


>gi|67459102|ref|YP_246726.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia felis
           URRWXCal2]
 gi|67004635|gb|AAY61561.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia felis
           URRWXCal2]
          Length = 327

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55
           +RDE+LH N  I +      ENP +WT+  +++      T++H E   +E+A+       
Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFE----VG 244

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
           G  GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TE
Sbjct: 245 GIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATE 304

Query: 116 YQQGA 120
           Y + A
Sbjct: 305 YSKAA 309


>gi|15604372|ref|NP_220888.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           prowazekii str. Madrid E]
 gi|51473694|ref|YP_067451.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia typhi
           str. Wilmington]
 gi|3861064|emb|CAA14964.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN (nrdB) [Rickettsia
           prowazekii]
 gi|51460006|gb|AAU03969.1| Ribonucleotide reductase [Rickettsia typhi str. Wilmington]
 gi|292572126|gb|ADE30041.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia
           prowazekii Rp22]
          Length = 324

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55
           +RDE+LH N  I +      ENP +WT+  +++      T++H E   +E+A+       
Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFE----VG 244

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
           G  GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TE
Sbjct: 245 GIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATE 304

Query: 116 YQQGA 120
           Y + A
Sbjct: 305 YSKAA 309


>gi|320008647|gb|ADW03497.1| Ribonucleoside-diphosphate reductase [Streptomyces flavogriseus
           ATCC 33331]
          Length = 338

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 71/120 (59%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+  E +Q+   ML EA   E+ +  +    G  G+N
Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPDLFDDELRQQVTDMLKEAVEAELQFGRDLCGDGLPGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G   L+  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 272 TESMRQYLECVADQRLTRLGFPALYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329


>gi|320107274|ref|YP_004182864.1| Ribonucleoside-diphosphate reductase [Terriglobus saanensis SP1PR4]
 gi|319925795|gb|ADV82870.1| Ribonucleoside-diphosphate reductase [Terriglobus saanensis SP1PR4]
          Length = 346

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 67/119 (56%), Gaps = 2/119 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES HL F  +V+  ++ + P LW  E +++   M+ EA   E  +A + +  G  GL+
Sbjct: 220 RDESAHLEFAFEVVQVVRAQEPDLWDTELERQVVVMMEEAIDAEAQFAEDLLSGGVAGLS 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY+ ++A+ R  ++G+   F   +NPF +M E+ D+++  NFFE RV+ YQ   
Sbjct: 280 VRDMRQYLGYVADSRLERLGIGAHFN-AKNPFSFM-ELQDVQELTNFFERRVSAYQTAV 336


>gi|254384639|ref|ZP_04999978.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces sp.
           Mg1]
 gi|194343523|gb|EDX24489.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces sp.
           Mg1]
          Length = 338

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ +  +    G  G+N
Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLKEAVDAELQFGRDLCGDGLPGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE R + YQ   E
Sbjct: 272 TESMREYLECVADQRLVRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329

Query: 122 LKWD 125
              D
Sbjct: 330 GTVD 333


>gi|182436093|ref|YP_001823812.1| putative ribonucleoside-diphosphate reductase small subunit
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326776718|ref|ZP_08235983.1| Ribonucleoside-diphosphate reductase [Streptomyces cf. griseus
           XylebKG-1]
 gi|178464609|dbj|BAG19129.1| putative ribonucleoside-diphosphate reductase small subunit
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326657051|gb|EGE41897.1| Ribonucleoside-diphosphate reductase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 338

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 70/120 (58%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ +  +   +G  G+N
Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPDLFDDALQQQVTDMLKEAVEAELQFGRDLCGEGLPGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P    +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 272 TESMRQYLECVADQRLARLGF-PTVYGSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329


>gi|302536805|ref|ZP_07289147.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces sp.
           C]
 gi|302445700|gb|EFL17516.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces sp.
           C]
          Length = 356

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ +  +    G  G+N
Sbjct: 230 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLKEAVEAELQFGRDLCGDGLPGMN 289

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE R + YQ   E
Sbjct: 290 TDSMREYLECVADQRLVRLGFPPVYG-SQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 347

Query: 122 LKWD 125
              D
Sbjct: 348 GTVD 351


>gi|311898297|dbj|BAJ30705.1| putative ribonucleoside-diphosphate reductase subunit beta
           [Kitasatospora setae KM-6054]
          Length = 339

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 73/120 (60%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H++F   V++ ++ E P L+  +  ++   ML EA   E+ +A +   +G  G+N
Sbjct: 213 RDESMHMDFAFSVVDTVREEEPDLFDDKMARQVTEMLEEAVEAELQFARDLCGEGLPGMN 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y+Q +A++R  ++GL P+   + NPF +M E+ ++++  NFFE RV+ YQ   E
Sbjct: 273 TESMREYLQAVADQRLARLGL-PIRYGSTNPFGFM-ELQNVQELTNFFERRVSAYQIAVE 330


>gi|296536499|ref|ZP_06898590.1| ribonucleotide-diphosphate reductase subunit beta [Roseomonas
           cervicalis ATCC 49957]
 gi|296263178|gb|EFH09712.1| ribonucleotide-diphosphate reductase subunit beta [Roseomonas
           cervicalis ATCC 49957]
          Length = 343

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK-----SRTMLHEATLLEIAYAHETMPK 55
           +RDE+LH    I +      ENP +WT++ +       +  + HE   +++A+       
Sbjct: 198 VRDETLHCLSVIRLFRTFIQENPEIWTEQLKADLVEICTTIVEHEDAFIDLAFEL----G 253

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
           G  G+     +QY++FIA+RR  Q+GLEP +   +NP PW+ E+++  +  NFFE R TE
Sbjct: 254 GVQGMEPEDVKQYIRFIADRRLQQLGLEPHYGTEKNPLPWLDEILNAVEHMNFFEGRATE 313

Query: 116 YQQGA 120
           Y + +
Sbjct: 314 YSKAS 318


>gi|56416698|ref|YP_153772.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           marginale str. St. Maries]
 gi|254994906|ref|ZP_05277096.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           marginale str. Mississippi]
 gi|255003042|ref|ZP_05278006.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           marginale str. Puerto Rico]
 gi|255004164|ref|ZP_05278965.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           marginale str. Virginia]
 gi|56387930|gb|AAV86517.1| ribonuceoside-diphosphate reductase beta chain [Anaplasma marginale
           str. St. Maries]
          Length = 324

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60
           RDE+LH    I + N    EN  +W +  +++          LE  +       G V GL
Sbjct: 193 RDETLHTESIIRLFNTFIHENQEIWDENLREELYGACRVIVSLEDEFIDLAFALGDVEGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A   ++Y+++IANRR  Q+ LEP++    NP PW+ E+++  +  NFFE RVTEY + A
Sbjct: 253 SAAEVKRYIRYIANRRLKQLDLEPIYGDNVNPLPWLDEILNGVEHTNFFENRVTEYSRAA 312

Query: 121 -ELKWD 125
            E  WD
Sbjct: 313 TEGTWD 318


>gi|222475064|ref|YP_002563479.1| ribonuceoside-diphosphate reductase beta chain (nrdB) [Anaplasma
           marginale str. Florida]
 gi|222419200|gb|ACM49223.1| ribonuceoside-diphosphate reductase beta chain (nrdB) [Anaplasma
           marginale str. Florida]
          Length = 343

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60
           RDE+LH    I + N    EN  +W +  +++          LE  +       G V GL
Sbjct: 212 RDETLHTESIIRLFNTFIHENQEIWDENLREELYGACRVIVSLEDEFIDLAFALGDVEGL 271

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A   ++Y+++IANRR  Q+ LEP++    NP PW+ E+++  +  NFFE RVTEY + A
Sbjct: 272 SAAEVKRYIRYIANRRLKQLDLEPIYGDNVNPLPWLDEILNGVEHTNFFENRVTEYSRAA 331

Query: 121 -ELKWD 125
            E  WD
Sbjct: 332 TEGTWD 337


>gi|154250961|ref|YP_001411785.1| ribonucleotide-diphosphate reductase subunit beta [Parvibaculum
           lavamentivorans DS-1]
 gi|154154911|gb|ABS62128.1| Ribonucleoside-diphosphate reductase [Parvibaculum lavamentivorans
           DS-1]
          Length = 319

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 73/124 (58%), Gaps = 9/124 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQ----QKSRTMLH-EATLLEIAYAHETMPKG 56
           RDE+LH    + +      ENP +WT+E +    +   T++H E   +++A+   ++   
Sbjct: 190 RDETLHTVSAMKLFRTFVDENPEIWTEELRRDIYKACETIIHHEDAFIDLAFEMGSIE-- 247

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
             GL+A   + Y+++IA+RR  Q+ L+P+++  +NP PWM E+++  +  NFFE R TEY
Sbjct: 248 --GLSAQEVKNYIRYIADRRLVQLNLQPIYRTEKNPLPWMDEMLNGIEHTNFFENRATEY 305

Query: 117 QQGA 120
            + +
Sbjct: 306 SKAS 309


>gi|271967540|ref|YP_003341736.1| ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM
           43021]
 gi|270510715|gb|ACZ88993.1| Ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM
           43021]
          Length = 331

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 69/120 (57%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F   V++ ++ E P L+  +   +   M+ EA   E+A+A +    G  G+N
Sbjct: 205 RDESMHMEFAFSVVDTVRAEEPDLFDDKLGAQVTQMIEEAVEAELAFAADLCGDGMSGMN 264

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++++A++R  ++   P+   T NPF +M E+ D+++  NFFE RV+ YQ   E
Sbjct: 265 VEQMRQYLEYVADQRLVRLRF-PVRYGTANPFAFM-ELQDVQELANFFERRVSAYQVAVE 322


>gi|269958883|ref|YP_003328672.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           centrale str. Israel]
 gi|269848714|gb|ACZ49358.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           centrale str. Israel]
          Length = 332

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 10/130 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV--- 58
           RDE+LH    I + N    EN  +W        R  L+ A  + ++   E +   F    
Sbjct: 201 RDETLHTESIIRLFNTFIHENQEIWDANL----RAELYGACRVIVSLEDEFIDLAFALGD 256

Query: 59  --GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
             GL+A   ++Y+++IANRR  Q+ LEP++    NP PW+ E+++  +  NFFE RVTEY
Sbjct: 257 VEGLSASEVKRYIRYIANRRLKQLDLEPIYGDNVNPLPWLDEILNGVEHTNFFENRVTEY 316

Query: 117 QQGA-ELKWD 125
            + A E  WD
Sbjct: 317 SRAATEGTWD 326


>gi|115378653|ref|ZP_01465803.1| ribonucleoside-diphosphate reductase, beta subunit [Stigmatella
           aurantiaca DW4/3-1]
 gi|115364319|gb|EAU63404.1| ribonucleoside-diphosphate reductase, beta subunit [Stigmatella
           aurantiaca DW4/3-1]
          Length = 288

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 2/116 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H+ F  + I   + E P L+    Q     M+ EA   E  +A + +  G  GL+
Sbjct: 158 RDESTHMAFAFEAIRVARQEEPDLFDARMQADVVAMMREAVECETLFAQDLLSGGVAGLS 217

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
                QY++++A++R   +GL P+F+  +N  P+M ++ D+++  NFFE RV+ YQ
Sbjct: 218 VQEMRQYLEYVADQRLTMLGLAPVFR-VKNSLPFM-DLQDVQELTNFFERRVSAYQ 271


>gi|156087150|ref|XP_001610982.1| ribonucleoside-diphosphate reductase small subunit [Babesia bovis
           T2Bo]
 gi|154798235|gb|EDO07414.1| ribonucleoside-diphosphate reductase small subunit, putative
           [Babesia bovis]
          Length = 339

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 73/121 (60%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +FG  + +++K + P        +  + ++ EA  +E  +  +++P   +G+N
Sbjct: 214 RDEGLHADFGCFIYSKLKHKLP-------AECVQQIIKEAVAVERVFVCDSLPTDLIGMN 266

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G+ P++K T+NPF WM E+I ++ + NFFE RV EYQ+   
Sbjct: 267 SMLMAQYIEFVADRLLQALGVPPVYK-TKNPFEWM-ELISVQGKTNFFEKRVGEYQKSGI 324

Query: 122 L 122
           L
Sbjct: 325 L 325


>gi|302521843|ref|ZP_07274185.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. SPB78]
 gi|302430738|gb|EFL02554.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. SPB78]
          Length = 345

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 71/120 (59%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+  + + + + ML  A   E+ +A +    G  G+N
Sbjct: 219 RDETMHMSFAFDVVDTVRKEEPELFDDKLEAEVKEMLAGAVDAELQFARDLCGDGLPGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y+Q +A++R  ++G  P++  + NPF +M E+  +++  NFFE R + YQ   E
Sbjct: 279 TESMREYLQCVADQRLVRLGFSPVYG-SSNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 336


>gi|149916691|ref|ZP_01905193.1| putative ribonucleoside-diphosphate reductase beta chain
           [Plesiocystis pacifica SIR-1]
 gi|149822408|gb|EDM81797.1| putative ribonucleoside-diphosphate reductase beta chain
           [Plesiocystis pacifica SIR-1]
          Length = 356

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H+ F   VI+ ++ + P L+  E +     M+ EA   E+A+A + +  G  GL 
Sbjct: 230 RDESAHMAFAFSVIDVVRDQEPELFDAELEAAVVEMIEEAVACEVAFAEDLLGLGVAGLT 289

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                 Y+++ A++R  ++G+   +  T NP  +M E+ D+ +  NFFE RV+ YQ G  
Sbjct: 290 VADLRAYLEYCADQRLQRLGMATRYGST-NPLSFM-ELQDIPELANFFERRVSAYQHGVS 347

Query: 122 LKWD 125
              D
Sbjct: 348 GTID 351


>gi|91205547|ref|YP_537902.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           bellii RML369-C]
 gi|91069091|gb|ABE04813.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia bellii
           RML369-C]
          Length = 324

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLHEATLLEIAYAHETMPKG 56
           +RDE+LH N  I +      ENP +WT+  + +      T++H      IA A E    G
Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTENLRSRIYKACTTIVHFEDAF-IALAFEV--GG 245

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
             GL A     Y+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TEY
Sbjct: 246 IEGLTADEVRLYIRYIADRRLFQLGLKDIYMVKNNPLPWLDEMLNGVEHTNFFENRATEY 305

Query: 117 QQGA 120
            + A
Sbjct: 306 SKAA 309


>gi|157827263|ref|YP_001496327.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           bellii OSU 85-389]
 gi|157802567|gb|ABV79290.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           bellii OSU 85-389]
          Length = 324

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLHEATLLEIAYAHETMPKG 56
           +RDE+LH N  I +      ENP +WT+  + +      T++H      IA A E    G
Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTENLRSRIYKACTTIVHFEDAF-IALAFEV--GG 245

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
             GL A     Y+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TEY
Sbjct: 246 IEGLTADEVRLYIRYIADRRLFQLGLKDIYMVKNNPLPWLDEMLNGVEHTNFFENRATEY 305

Query: 117 QQGA 120
            + A
Sbjct: 306 SKAA 309


>gi|318060206|ref|ZP_07978929.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SA3_actG]
 gi|318077113|ref|ZP_07984445.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SA3_actF]
 gi|333024515|ref|ZP_08452579.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptomyces sp. Tu6071]
 gi|332744367|gb|EGJ74808.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptomyces sp. Tu6071]
          Length = 345

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 71/120 (59%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+  + + + + ML  A   E+ +A +    G  G+N
Sbjct: 219 RDETMHMSFAFDVVDTVRKEEPELFDDKLEAEVKEMLAGAVDAELQFARDLCGDGLPGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y+Q +A++R  ++G  P++  + NPF +M E+  +++  NFFE R + YQ   E
Sbjct: 279 TESMREYLQCVADQRLVRLGFSPVYG-SSNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 336


>gi|310823070|ref|YP_003955428.1| ribonucleoside-diphosphate reductase subunit beta [Stigmatella
           aurantiaca DW4/3-1]
 gi|309396142|gb|ADO73601.1| Ribonucleoside-diphosphate reductase, beta subunit [Stigmatella
           aurantiaca DW4/3-1]
          Length = 336

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 2/116 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H+ F  + I   + E P L+    Q     M+ EA   E  +A + +  G  GL+
Sbjct: 206 RDESTHMAFAFEAIRVARQEEPDLFDARMQADVVAMMREAVECETLFAQDLLSGGVAGLS 265

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
                QY++++A++R   +GL P+F+  +N  P+M ++ D+++  NFFE RV+ YQ
Sbjct: 266 VQEMRQYLEYVADQRLTMLGLAPVFR-VKNSLPFM-DLQDVQELTNFFERRVSAYQ 319


>gi|290957506|ref|YP_003488688.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           scabiei 87.22]
 gi|260647032|emb|CBG70131.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           scabiei 87.22]
          Length = 355

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 73/124 (58%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  +V++ ++ E P L+ +  +Q+   ML EA   E+ +  +    G  G+N
Sbjct: 229 RDETMHMSFAFEVVDTVRKEEPELFDELLRQQVTDMLKEAVEAELQFGRDLCGDGLPGMN 288

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE R + YQ   E
Sbjct: 289 TESMRQYLECVADQRLTRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 346

Query: 122 LKWD 125
              D
Sbjct: 347 GTVD 350


>gi|11544904|emb|CAC17630.1| class I ribonucleotide-diphosphate reductase small subunit chain
           [Streptomyces jumonjinensis]
          Length = 322

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 67/111 (60%), Gaps = 2/111 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ +  +    G  G+N
Sbjct: 213 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLQEAVEAELQFGSDLCGDGLPGMN 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 112
             S  +Y+Q +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R
Sbjct: 273 TESMREYLQCVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERR 321


>gi|238023979|ref|YP_002908211.1| Ribonucleotide reductase subunit beta [Burkholderia glumae BGR1]
 gi|237878644|gb|ACR30976.1| Ribonucleotide reductase, beta subunit [Burkholderia glumae BGR1]
          Length = 337

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 55/125 (44%), Positives = 71/125 (56%), Gaps = 5/125 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDE LH  FGI VI Q+ +E  HL  +      + +  EA   E AYA   +    +G 
Sbjct: 216 MRDEVLHCGFGIRVIRQL-LEEEHL--RLDPHAVQQIWEEAEAAERAYAQYILRDPILGY 272

Query: 61  NAP-SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +A   CEQ+ +FIANRR  Q+ +   F    N  PW+ E  +L+KEKNFFETRVT+YQ G
Sbjct: 273 SAELHCEQF-RFIANRRATQLSMPAPFPGATNALPWLDEQANLRKEKNFFETRVTDYQSG 331

Query: 120 AELKW 124
             L W
Sbjct: 332 GALDW 336


>gi|325119319|emb|CBZ54873.1| hypothetical protein NCLIV_052980 [Neospora caninum Liverpool]
          Length = 392

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +Q+K + P        +  + M+ EA  +E A+  E +P   +G+N
Sbjct: 267 RDEGLHADFACLLYSQLKNKLP-------DKVVQDMVREAVTVERAFICEALPVDLIGMN 319

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
             S  QY++F+A+R    +G+  +F +  NPF WM E+I L+ + NFFE RV EYQ+  
Sbjct: 320 NRSMAQYIEFVADRLLTSLGVPKIF-FATNPFDWM-ELISLQGKTNFFEKRVGEYQKAG 376


>gi|221480670|gb|EEE19110.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Toxoplasma gondii GT1]
          Length = 391

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +Q+K + P        +  + M+ EA  +E A+  E +P   +G+N
Sbjct: 266 RDEGLHADFACLLYSQLKHKLP-------DKVVQDMVREAVTVERAFICEALPVDLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
             S  QY++F+A+R    +G+  +F +  NPF WM E+I L+ + NFFE RV EYQ+  
Sbjct: 319 NRSMAQYIEFVADRLLTSLGVPKIF-FATNPFDWM-ELISLQGKTNFFEKRVGEYQKAG 375


>gi|237845387|ref|XP_002371991.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Toxoplasma gondii ME49]
 gi|211969655|gb|EEB04851.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Toxoplasma gondii ME49]
 gi|221501644|gb|EEE27410.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Toxoplasma gondii VEG]
          Length = 391

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +Q+K + P        +  + M+ EA  +E A+  E +P   +G+N
Sbjct: 266 RDEGLHADFACLLYSQLKHKLP-------DKVVQDMVREAVTVERAFICEALPVDLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
             S  QY++F+A+R    +G+  +F +  NPF WM E+I L+ + NFFE RV EYQ+  
Sbjct: 319 NRSMAQYIEFVADRLLTSLGVPKIF-FATNPFDWM-ELISLQGKTNFFEKRVGEYQKAG 375


>gi|840719|emb|CAA54549.1| ribonucleotide reductase R2 [Arabidopsis thaliana]
          Length = 340

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +I+ +++  P        +K   ++HEA  +E  +  + +P   +G+N
Sbjct: 211 RDEGLHCDFACLLISLLQLHVP-------LEKVYQIVHEAVEIETEFVCKALPCDLIGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY+QF+A+R    +G E  +K  ENPF WM E I L+ + NFFE RV EYQ+ +
Sbjct: 264 SNLMSQYIQFVADRLLVTLGCERTYK-AENPFDWM-EFISLQGKTNFFEKRVGEYQKAS 320


>gi|190572323|ref|YP_001970168.1| putative ribonucleotide diphosphate reductase, small chain
           [Stenotrophomonas maltophilia K279a]
 gi|190010245|emb|CAQ43853.1| putative ribonucleotide diphosphate reductase, small chain
           [Stenotrophomonas maltophilia K279a]
          Length = 339

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 69/120 (57%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H+ F  + +  ++ E P L+ +E +Q+   ML EA   E+ +A + +  G  G++
Sbjct: 213 RDESAHMEFAFESVRVVREEEPDLFDEEMKQQVYDMLAEAIECEVQFAEDVLSGGVAGIS 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY+Q  A++   ++G+E  +    NP P+M E+ D+++  NFFE RV+ YQ G +
Sbjct: 273 TRDMRQYLQHCADQHFAKLGMEKKYN-VRNPLPFM-ELQDVQELTNFFERRVSAYQVGVQ 330


>gi|11544907|emb|CAC17632.1| class I ribonucleotide-diphosphate reductase small chain
           [Streptomyces microflavus]
          Length = 321

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 68/111 (61%), Gaps = 2/111 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+    Q++   ML EA   E+ +  +   +G  G+N
Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPELFDDALQEQVTAMLKEAVEAELQFGRDLCGEGLPGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 112
             S  +Y+Q +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R
Sbjct: 272 TESMREYLQCVADQRLTRLGFAPVYG-SENPFAFM-ELQGVQELTNFFERR 320


>gi|254521240|ref|ZP_05133295.1| ribonucleoside-diphosphate reductase, beta subunit
           [Stenotrophomonas sp. SKA14]
 gi|219718831|gb|EED37356.1| ribonucleoside-diphosphate reductase, beta subunit
           [Stenotrophomonas sp. SKA14]
          Length = 339

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 68/120 (56%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H+ F  + +  ++ E P L+  E +Q+   ML EA   E+ +A + +  G  G++
Sbjct: 213 RDESAHMEFAFESVRVVREEEPDLFDDEMKQQVYDMLAEAIECEVQFAEDVLSGGVAGIS 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY+Q  A++   ++G+E  +    NP P+M E+ D+++  NFFE RV+ YQ G +
Sbjct: 273 TRDMRQYLQHCADQHFAKLGMEKKYN-VRNPLPFM-ELQDVQELTNFFERRVSAYQVGVQ 330


>gi|68171256|ref|ZP_00544659.1| Ribonucleoside-diphosphate reductase [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|67999338|gb|EAM85984.1| Ribonucleoside-diphosphate reductase [Ehrlichia chaffeensis str.
           Sapulpa]
          Length = 294

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58
           +RDE+LH    I + N    EN  +W    +Q+    L+EA  + ++   E +   F   
Sbjct: 162 VRDETLHTESIIRLFNTFIQENYEIWDDSLKQE----LYEACRIIVSLEDEFINLAFACG 217

Query: 59  ---GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL++   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +  NFFE RVTE
Sbjct: 218 DVEGLSSKEVKEYIRYIANRRLLQLNLEPIYDTNKNPLLWLDEILNGVEHTNFFENRVTE 277

Query: 116 YQQGA 120
           Y + A
Sbjct: 278 YARAA 282


>gi|88658048|ref|YP_507564.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
           chaffeensis str. Arkansas]
 gi|88599505|gb|ABD44974.1| ribonucleoside-diphosphate reductase, beta subunit [Ehrlichia
           chaffeensis str. Arkansas]
          Length = 324

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58
           +RDE+LH    I + N    EN  +W    +Q+    L+EA  + ++   E +   F   
Sbjct: 192 VRDETLHTESIIRLFNTFIQENYEIWDDSLKQE----LYEACRIIVSLEDEFINLAFACG 247

Query: 59  ---GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL++   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +  NFFE RVTE
Sbjct: 248 DVEGLSSKEVKEYIRYIANRRLLQLNLEPIYDTNKNPLLWLDEILNGVEHTNFFENRVTE 307

Query: 116 YQQGA 120
           Y + A
Sbjct: 308 YARAA 312


>gi|58040422|ref|YP_192386.1| ribonucleotide-diphosphate reductase subunit beta [Gluconobacter
           oxydans 621H]
 gi|58002836|gb|AAW61730.1| Ribonucleoside-diphosphate reductase beta chain [Gluconobacter
           oxydans 621H]
          Length = 339

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 68/121 (56%), Gaps = 1/121 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDE+LH    I +      EN  +WT EF+++   +       E A+       G V G
Sbjct: 204 VRDETLHCLSMIRLFRTFVRENSEIWTPEFREELTQICRTTVEHEDAFIDLCFEMGPVEG 263

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +++   ++Y++FIA+RR  Q+GL+P++    NP PW+ ++++  +  NFFE R TEY + 
Sbjct: 264 MSSEDVKRYIRFIADRRLTQLGLDPVYGQESNPLPWIDDMLNAVEHANFFENRSTEYSRA 323

Query: 120 A 120
           +
Sbjct: 324 S 324


>gi|57239055|ref|YP_180191.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
           ruminantium str. Welgevonden]
 gi|15811135|gb|AAL08816.1|AF308664_1 hypothetical ribonucleoside reductase beta chain [Ehrlichia
           ruminantium]
 gi|57161134|emb|CAH58047.1| putative ribonucleoside-diphosphate reductase beta chain [Ehrlichia
           ruminantium str. Welgevonden]
          Length = 324

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58
           +RDE+LH    I + N    EN  +W  + +++    L+EA  + +    E +   F   
Sbjct: 192 VRDETLHTESIIRLFNTFIQENYEIWDDDLKKE----LYEACSVIVTLEDEFINLAFACG 247

Query: 59  ---GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL+A   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +  NFFE RVTE
Sbjct: 248 DVEGLSAQEVKEYIRYIANRRLIQLNLEPIYSANKNPLLWLDEILNGVEHTNFFENRVTE 307

Query: 116 YQQGA 120
           Y + A
Sbjct: 308 YTRAA 312


>gi|58578998|ref|YP_197210.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
           ruminantium str. Welgevonden]
 gi|58417624|emb|CAI26828.1| Ribonucleoside-diphosphate reductase beta chain [Ehrlichia
           ruminantium str. Welgevonden]
          Length = 329

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58
           +RDE+LH    I + N    EN  +W  + +++    L+EA  + +    E +   F   
Sbjct: 197 VRDETLHTESIIRLFNTFIQENYEIWDDDLKKE----LYEACSVIVTLEDEFINLAFACG 252

Query: 59  ---GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL+A   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +  NFFE RVTE
Sbjct: 253 DVEGLSAQEVKEYIRYIANRRLIQLNLEPIYSANKNPLLWLDEILNGVEHTNFFENRVTE 312

Query: 116 YQQGA 120
           Y + A
Sbjct: 313 YTRAA 317


>gi|187932511|ref|YP_001884520.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           botulinum B str. Eklund 17B]
 gi|187720664|gb|ACD21885.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum B str. Eklund 17B]
          Length = 344

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 2/123 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ ENP  +T + + + R M+H     EI + H  +     G+N
Sbjct: 218 RDENTHLWLFRNIIKELQSENPESFTADLKNELREMMHIGVENEILWGHYVIGDKIQGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E Y++++ N+R  +IGLEPLF  Y ENP  W+  V +    K +FFE + T Y + 
Sbjct: 278 KKLIEDYIKYLGNKRLKEIGLEPLFSGYEENPATWVDVVANSNSVKTDFFEAKSTAYAKV 337

Query: 120 AEL 122
           + L
Sbjct: 338 STL 340


>gi|194363985|ref|YP_002026595.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
           R551-3]
 gi|194346789|gb|ACF49912.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
           R551-3]
          Length = 339

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H++F  + ++ I+ E P L+  + +Q    ML EA   E+ +A + +  G  G++
Sbjct: 213 RDESAHMDFAFECVDVIREEEPDLFDDKMKQDVYDMLAEAIECEVQFAEDVLSGGVAGIS 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY+Q  A+   H++G+E  +    NP  +M E+ D+++  NFFE R + YQ G +
Sbjct: 273 TRDMRQYLQHCADNHFHRLGMERKYN-VRNPLSFM-ELQDVQELTNFFERRASAYQVGVQ 330


>gi|73666936|ref|YP_302952.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia canis
           str. Jake]
 gi|72394077|gb|AAZ68354.1| Ribonucleoside-diphosphate reductase [Ehrlichia canis str. Jake]
          Length = 324

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58
           +RDE+LH    I + N    EN  +W    + +    L+EA  + ++   E +   F   
Sbjct: 192 VRDETLHTESIIRLFNTFVQENYEIWDDSLKHE----LYEACKIIVSLEDEFINLAFACG 247

Query: 59  ---GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL+A   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +  NFFE RVTE
Sbjct: 248 DVEGLSAKEVKKYIRYIANRRLLQLNLEPIYDANKNPLLWLDEILNGVEHTNFFENRVTE 307

Query: 116 YQQGA 120
           Y + A
Sbjct: 308 YARAA 312


>gi|58617056|ref|YP_196255.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
           ruminantium str. Gardel]
 gi|58416668|emb|CAI27781.1| Ribonucleoside-diphosphate reductase beta chain [Ehrlichia
           ruminantium str. Gardel]
          Length = 329

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58
           +RDE+LH    I + N    EN  +W  + +++    L+EA  + +    E +   F   
Sbjct: 197 VRDETLHTESIIRLFNTFIQENYEIWDGDLKKE----LYEACSVIVTLEDEFINLAFACG 252

Query: 59  ---GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL+A   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +  NFFE RVTE
Sbjct: 253 DVEGLSAQEVKEYIRYIANRRLIQLNLEPIYSANKNPLLWLDEILNGVEHTNFFENRVTE 312

Query: 116 YQQGA 120
           Y + A
Sbjct: 313 YTRAA 317


>gi|108763495|ref|YP_633213.1| ribonucleoside-diphosphate reductase subunit beta [Myxococcus
           xanthus DK 1622]
 gi|108467375|gb|ABF92560.1| ribonucleoside-diphosphate reductase, beta subunit [Myxococcus
           xanthus DK 1622]
          Length = 349

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 67/116 (57%), Gaps = 2/116 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H+ F  + I   + E P L+  + ++    ML EA   E  +A + +  G +GL+
Sbjct: 219 RDESAHMAFAFESIQVARKEEPDLFDAQMERDVVAMLREAVECETQFAQDLLSGGVMGLS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
                 Y++++A++R   +G+ P+F  T+NP  +M ++ D+++  NFFE RV+ YQ
Sbjct: 279 VQDMRGYLEYVADQRLQMLGMTPVFG-TKNPLHFM-DLQDVQELTNFFERRVSSYQ 332


>gi|291303011|ref|YP_003514289.1| Ribonucleoside-diphosphate reductase [Stackebrandtia nassauensis
           DSM 44728]
 gi|290572231|gb|ADD45196.1| Ribonucleoside-diphosphate reductase [Stackebrandtia nassauensis
           DSM 44728]
          Length = 338

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 2/116 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H+NF   V++ ++ E P L+  E  +    M+ EA   E+ +A +   +G  G+ 
Sbjct: 212 RDESCHMNFAFSVVDVVRNEEPELFDDELTEAVTRMIEEAVAAELQFARDLCGEGMPGMT 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
               + Y++++A++R  ++G+ P+   ++NPF +M+ + D+++  NFFE R T YQ
Sbjct: 272 VNDMKSYLEYVADQRLTRLGM-PVRYGSKNPFGFMA-LQDVQELTNFFERRPTAYQ 325


>gi|225432510|ref|XP_002279943.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 340

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P  W     QK   ++HEA  +E  +  E +P   +G+N
Sbjct: 212 RDEGLHCDFACLLYSLLQKQLP--W-----QKVHHIVHEAVEIETQFVCEALPCALIGMN 264

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  +   ENPF WM E I L+ + NFFE RV +YQ+ +
Sbjct: 265 ATLMSQYIKFVADRLLVALGYERKYN-VENPFDWM-EFISLQGKANFFERRVGDYQKAS 321


>gi|226950223|ref|YP_002805314.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A2 str. Kyoto]
 gi|226843961|gb|ACO86627.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A2 str. Kyoto]
          Length = 342

 Score = 76.6 bits (187), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 70/126 (55%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K ENPH++T+E +++ R M+      EI +         +GLN
Sbjct: 214 RDEVTHLVLFQNIIKELKNENPHIFTEELEEEFRQMMRIGVEHEIQWGQYVTNNEILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y+++++N R   IGL+PL+ +  ++P  W+     L   K +FFE +VT Y + 
Sbjct: 274 DELIEKYIKYLSNLRLVAIGLKPLYLEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|224000239|ref|XP_002289792.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975000|gb|EED93329.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 335

 Score = 76.6 bits (187), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 73/119 (61%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +++K+       K  Q++ +T+++EA  +E ++  + +P   +G+N
Sbjct: 197 RDEGLHCSFACQLYSKLKL-------KLSQEEIQTIINEAVDVEKSFICDALPVSLIGMN 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G + ++  ++NPF WM ++I L+ + NFFE RV EYQ+  
Sbjct: 250 SRLMAQYIEFVADRMLTDLGYQAMYG-SKNPFDWM-DMISLEGKTNFFEKRVGEYQKSG 306


>gi|162452149|ref|YP_001614516.1| ribonucleotide-diphosphate reductase [Sorangium cellulosum 'So ce
           56']
 gi|161162731|emb|CAN94036.1| Ribonucleotide-diphosphate reductase [Sorangium cellulosum 'So ce
           56']
          Length = 339

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 2/118 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H+ F  +V++  + E P L+     +    M+ EA   E  +A + +  G  G++
Sbjct: 213 RDESAHMRFAFEVVSTARREEPELFDAGLARSILDMMDEAIACEARFAEDLLGAGVAGMS 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           A    +Y++F A++R   +G+   +   +NPF +M ++ D+++  NFFE RV+ YQ G
Sbjct: 273 ARDVRRYLEFCADQRLATLGMPKRYG-AKNPFSFM-DLQDVQEVTNFFERRVSAYQVG 328


>gi|15229476|ref|NP_189000.1| RNR2A (RIBONUCLEOTIDE REDUCTASE 2A); ribonucleoside-diphosphate
           reductase [Arabidopsis thaliana]
 gi|27735240|sp|P50651|RIR2A_ARATH RecName: Full=Ribonucleoside-diphosphate reductase small chain A;
           AltName: Full=Ribonucleoside-diphosphate reductase R2A
           subunit; Short=AtRNR2; Short=Protein R2at; AltName:
           Full=Ribonucleotide reductase small subunit A
 gi|13937232|gb|AAK50108.1|AF372971_1 AT3g23580/MDB19_7 [Arabidopsis thaliana]
 gi|9294514|dbj|BAB02776.1| ribonucleotide reductase [Arabidopsis thaliana]
 gi|23505945|gb|AAN28832.1| At3g23580/MDB19_7 [Arabidopsis thaliana]
 gi|332643258|gb|AEE76779.1| Ribonucleoside-diphosphate reductase small chain A [Arabidopsis
           thaliana]
          Length = 341

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P        +K   ++HEA  +E  +  + +P   +G+N
Sbjct: 212 RDEGLHCDFACLLYSLLQKQLPL-------EKVYQIVHEAVEIETEFVCKALPCDLIGMN 264

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY+QF+A+R    +G E  +K  ENPF WM E I L+ + NFFE RV EYQ+ +
Sbjct: 265 SNLMSQYIQFVADRLLVTLGCERTYK-AENPFDWM-EFISLQGKTNFFEKRVGEYQKAS 321


>gi|297831106|ref|XP_002883435.1| RNR2/RNR2A [Arabidopsis lyrata subsp. lyrata]
 gi|297329275|gb|EFH59694.1| RNR2/RNR2A [Arabidopsis lyrata subsp. lyrata]
          Length = 341

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P        +K   ++HEA  +E  +  + +P   +G+N
Sbjct: 212 RDEGLHCDFACLLYSLLQKQLPL-------EKVYQIVHEAVEIETEFVCKALPCDLIGMN 264

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY+QF+A+R    +G E  +K  ENPF WM E I L+ + NFFE RV EYQ+ +
Sbjct: 265 SNLMSQYIQFVADRLLVTLGCERRYK-AENPFDWM-EFISLQGKTNFFEKRVGEYQKAS 321


>gi|219110949|ref|XP_002177226.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411761|gb|EEC51689.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 409

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 17/121 (14%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLH----EATLLEIAYAHETMPKGF 57
           RDE LH +F              L++K  ++ S T +H    EA  +E  +  + +P G 
Sbjct: 278 RDEGLHCSFAC-----------QLYSKLERKLSETDMHKLIGEAVEVEKGFVCDALPVGL 326

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
           +G+NA    QY++F+A+R  H +G   L+  ++NPF WM ++I L+ + NFFE RV EYQ
Sbjct: 327 IGMNASLMSQYVEFVADRLLHDLGYRTLYG-SKNPFDWM-DMISLEGKTNFFEKRVGEYQ 384

Query: 118 Q 118
           +
Sbjct: 385 K 385


>gi|313894221|ref|ZP_07827786.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           oral taxon 158 str. F0412]
 gi|313441045|gb|EFR59472.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           oral taxon 158 str. F0412]
          Length = 342

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I +++ E P L+T E ++K   M+ + T  EIA+         +GLN
Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEEKITDMIRQGTENEIAWGQYITDDKILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y++++AN R   IGL  L+ +  +NP  W+    +L   K +FFE +VT Y + 
Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|225012154|ref|ZP_03702591.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
           MS024-2A]
 gi|225003709|gb|EEG41682.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
           MS024-2A]
          Length = 325

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 68/121 (56%), Gaps = 8/121 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F +       + N HL  K    + + +L +A  +E  +  E++P   +G+N
Sbjct: 198 RDEGVHCDFAV------HLHNHHLVNKVPPARIKEILLDALTIEREFITESLPISLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+ +R   ++GLE  F  T NPF +M ++I L+ + NFFE RV EYQ+   
Sbjct: 252 AKLMTQYLEFVTDRLLQELGLEKEFNVT-NPFDFM-DMISLQGKTNFFEKRVGEYQKAGV 309

Query: 122 L 122
           L
Sbjct: 310 L 310


>gi|182419335|ref|ZP_02950587.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           butyricum 5521]
 gi|237666940|ref|ZP_04526925.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182376666|gb|EDT74238.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           butyricum 5521]
 gi|237658139|gb|EEP55694.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 344

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 2/123 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ EN  L+T+E + + R M+      EI + H  +     G+N
Sbjct: 218 RDENTHLWLFRNIIKELQNENAELFTEEIKNELREMMKTGVEQEILWGHYVIGDKIQGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y++++ N+R  +I LEPLF+ +  NP PW+    +    K +FFE R T Y + 
Sbjct: 278 KKLIEEYIKYLGNKRLKEINLEPLFEGHDVNPAPWVDRQSNANSVKTDFFEARSTAYAKA 337

Query: 120 AEL 122
           A L
Sbjct: 338 ATL 340


>gi|229827460|ref|ZP_04453529.1| hypothetical protein GCWU000182_02849 [Abiotrophia defectiva ATCC
           49176]
 gi|229788398|gb|EEP24512.1| hypothetical protein GCWU000182_02849 [Abiotrophia defectiva ATCC
           49176]
          Length = 354

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++  ENP ++T E + + R M+   TL EI +         +G+N
Sbjct: 226 RDEITHLVLFQNIIRELMKENPEIFTDELKGELREMVKVGTLNEIEWGQYVTNNEILGIN 285

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y+++++N R   IGL   F + TENP  W+    +L   K +FFE +VT Y + 
Sbjct: 286 NELIERYIKYLSNLRLRAIGLPVWFPEITENPMAWIESFSNLNATKTDFFEAKVTNYTKA 345

Query: 120 AELKWD 125
           A   +D
Sbjct: 346 AAFDFD 351


>gi|148284015|ref|YP_001248105.1| ribonucleotide-diphosphate reductase subunit beta [Orientia
           tsutsugamushi str. Boryong]
 gi|146739454|emb|CAM79093.1| ribonucleoside-diphosphate reductase beta chain [Orientia
           tsutsugamushi str. Boryong]
          Length = 329

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 74/133 (55%), Gaps = 14/133 (10%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSR------TMLH-EATLLEIAYAHETM 53
           +RDE+LH N  I +      E P +WT+  Q KSR      T++H E   +++A+     
Sbjct: 189 VRDETLHTNSIITLFKTFIQEYPEVWTE--QLKSRIYEACCTIIHFEDAFIDLAFE---- 242

Query: 54  PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 113
             G  GL A   ++Y+++IA+RR  Q+GL+  +   +NP  W+ ++++  +  NFFE RV
Sbjct: 243 VGGVEGLEARDVKKYIRYIADRRLLQLGLKENYLIEQNPLTWLDQILNGVEHTNFFENRV 302

Query: 114 TEYQQGAEL-KWD 125
           TEY + A    WD
Sbjct: 303 TEYTRSATTGSWD 315


>gi|152989800|ref|YP_001355522.1| ribonucleotide-diphosphate reductase subunit beta [Nitratiruptor
           sp. SB155-2]
 gi|151421661|dbj|BAF69165.1| ribonucleoside-diphosphate reductase, beta subunit [Nitratiruptor
           sp. SB155-2]
          Length = 341

 Score = 74.7 bits (182), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN +K E P L+TKE       M   A  LE ++         +GL 
Sbjct: 217 RDEVTHLLIFQNMINTVKKERPELFTKELIDDVYKMFEGAVDLETSWGKYITQGQILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               EQY++++A+ R  ++GLEP++   E+P  W+ +      +K NFFE  VT Y +G+
Sbjct: 277 DEIIEQYIKYLADDRLKRVGLEPMYN-VEHPIKWVDDFSKFNDQKTNFFEGNVTNYSKGS 335


>gi|294794440|ref|ZP_06759576.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           3_1_44]
 gi|294454770|gb|EFG23143.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           3_1_44]
          Length = 342

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I +++ E P L+T E + K   M+ + T  EIA+         +GLN
Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGTENEIAWGQYITDDKILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y++++AN R   IGL  L+ +  +NP  W+    +L   K +FFE +VT Y + 
Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|189184364|ref|YP_001938149.1| ribonucleotide-diphosphate reductase subunit beta [Orientia
           tsutsugamushi str. Ikeda]
 gi|189181135|dbj|BAG40915.1| ribonucleoside-diphosphate reductase beta chain [Orientia
           tsutsugamushi str. Ikeda]
          Length = 359

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 74/133 (55%), Gaps = 14/133 (10%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSR------TMLH-EATLLEIAYAHETM 53
           +RDE+LH N  I +      E P +WT+  Q KSR      T++H E   +++A+     
Sbjct: 204 VRDETLHTNSIITLFKTFIQEYPEVWTE--QLKSRIYEACCTIIHFEDAFIDLAFE---- 257

Query: 54  PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 113
             G  GL A   ++Y+++IA+RR  Q+GL+  +   +NP  W+ ++++  +  NFFE RV
Sbjct: 258 VGGVEGLEARDVKKYIRYIADRRLLQLGLKENYLIEQNPLTWLDQILNGVEHTNFFENRV 317

Query: 114 TEYQQGAEL-KWD 125
           TEY + A    WD
Sbjct: 318 TEYTRSATTGSWD 330


>gi|152993970|ref|YP_001359691.1| ribonucleotide-diphosphate reductase subunit beta [Sulfurovum sp.
           NBC37-1]
 gi|151425831|dbj|BAF73334.1| ribonucleoside-diphosphate reductase, beta subunit [Sulfurovum sp.
           NBC37-1]
          Length = 339

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 61/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN  K E P L+TKE       M  +A  LE  +         +GL 
Sbjct: 215 RDEVTHLLLFQNMINATKRERPELFTKELIDDVYQMFRDAVKLECEWGTYITQGQILGLT 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               EQY+Q++A++R H +GLE ++   E+P  W+        +K NFFE  VT Y +G+
Sbjct: 275 NEIIEQYIQYLADKRLHAVGLEKIYN-VEHPIKWVDNFSQFNDQKTNFFEGNVTNYSKGS 333


>gi|212723480|ref|NP_001131892.1| hypothetical protein LOC100193273 [Zea mays]
 gi|194692834|gb|ACF80501.1| unknown [Zea mays]
 gi|195624040|gb|ACG33850.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
          Length = 339

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++       +K  + + RT++ +A  +E  +  + +P   VG+N
Sbjct: 209 RDEGLHCDFACLLYDVLR-------SKLDEARVRTIVADAVDIEREFVCDALPVSLVGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G + ++  T NPF WM E+I L+ + NFFE RV +YQ+ +
Sbjct: 262 GDLMSQYIEFVADRLLMALGCKKMYNVT-NPFDWM-ELISLQGKTNFFEKRVGDYQKAS 318


>gi|254374389|ref|ZP_04989871.1| glutaredoxin [Francisella novicida GA99-3548]
 gi|151572109|gb|EDN37763.1| glutaredoxin [Francisella novicida GA99-3548]
          Length = 410

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDES+H+     +      ENP++   EF+++   M  +A  LE  +       G + G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDKFIELAYELGTIEG 338

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118
           L A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398

Query: 119 GAELKWD 125
           G    WD
Sbjct: 399 GLTGSWD 405


>gi|118497575|ref|YP_898625.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. novicida
           U112]
 gi|195536272|ref|ZP_03079279.1| ribonucleoside-diphosphate reductase, beta subunit domain
           [Francisella tularensis subsp. novicida FTE]
 gi|208779374|ref|ZP_03246720.1| ribonucleoside-diphosphate reductase, beta subunit domain
           [Francisella novicida FTG]
 gi|254372936|ref|ZP_04988425.1| hypothetical protein FTCG_00507 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|118423481|gb|ABK89871.1| bifunctional protein: glutaredoxin 3 /ribonucleotide reductase beta
           subunit [Francisella novicida U112]
 gi|151570663|gb|EDN36317.1| hypothetical protein FTCG_00507 [Francisella novicida GA99-3549]
 gi|194372749|gb|EDX27460.1| ribonucleoside-diphosphate reductase, beta subunit domain
           [Francisella tularensis subsp. novicida FTE]
 gi|208745174|gb|EDZ91472.1| ribonucleoside-diphosphate reductase, beta subunit domain
           [Francisella novicida FTG]
 gi|332678274|gb|AEE87403.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Francisella cf. novicida Fx1]
          Length = 410

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDES+H+     +      ENP++   EF+++   M  +A  LE  +       G + G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDKFIELAYELGTIEG 338

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118
           L A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398

Query: 119 GAELKWD 125
           G    WD
Sbjct: 399 GLTGSWD 405


>gi|148676854|gb|EDL08801.1| ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus]
          Length = 297

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  + + R ++ +A  +E  +  E +P G +G+N
Sbjct: 172 RDEGLHCDFACLMFQ-------YLVNKPSEDRVREIIADAVQIEQEFLTEALPVGLIGMN 224

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 225 CVLMKQYIEFVADRLLGELGFSKIFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 281


>gi|57339646|gb|AAW49810.1| hypothetical protein FTT0532 [synthetic construct]
          Length = 445

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDES+H+     +      ENP++   EF+++   M  +A  LE  +       G + G
Sbjct: 305 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 364

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118
           L A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 365 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 424

Query: 119 GAELKWD 125
           G    WD
Sbjct: 425 GLTGSWD 431


>gi|330814259|ref|YP_004358498.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487354|gb|AEA81759.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Candidatus Pelagibacter sp. IMCC9063]
          Length = 345

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWT----KEFQQKSRTML-HEATLLEIAYAHETMPK 55
           +RDE+LH N  I + N    ENP L      KE  +   T++ HE   +++A+    +  
Sbjct: 212 VRDETLHCNSMIKIFNTFCDENPGLLDDSLKKEIYEACSTIIEHEDAFIDLAFEMGDIE- 270

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL A   ++Y+++IANRR  Q+ L  L++  ENP  W+ ++++  +  NFFE R TE
Sbjct: 271 ---GLKAEEVKKYIRWIANRRLAQLRLNDLYEVKENPLTWLDDMLNGVEHMNFFEGRATE 327

Query: 116 YQQGA 120
           Y + +
Sbjct: 328 YSKAS 332


>gi|15896521|ref|NP_349870.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           acetobutylicum ATCC 824]
 gi|15026352|gb|AAK81210.1|AE007823_4 Ribonucleotide reductase beta subunit [Clostridium acetobutylicum
           ATCC 824]
 gi|325510679|gb|ADZ22315.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           acetobutylicum EA 2018]
          Length = 344

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 2/123 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ E P ++T+E +++ + M+      EI + H  +     G+N
Sbjct: 218 RDENTHLWLFRNIIKELQKEEPDMFTEEIKKELKDMVKTGVENEITWGHYVIGDNIQGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E Y++++ NRR   IG EP+++ Y ENP  W+    D    K +FFE + T Y + 
Sbjct: 278 KKLIEDYIKYLGNRRLEAIGFEPIYEGYDENPALWVDIYADANSVKTDFFEAKSTAYAKA 337

Query: 120 AEL 122
           + L
Sbjct: 338 STL 340


>gi|163753569|ref|ZP_02160692.1| ribonucleoside-diphosphate reductase 1, beta subunit [Kordia
           algicida OT-1]
 gi|161325783|gb|EDP97109.1| ribonucleoside-diphosphate reductase 1, beta subunit [Kordia
           algicida OT-1]
          Length = 326

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 70/121 (57%), Gaps = 8/121 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F +       + N HL  K  +++ R ++ +A  +E  +  E++P   +G+N
Sbjct: 199 RDEGVHCDFAV------HLHNNHLVNKVPKERIRAIIVDALNIEREFITESLPVSLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+ +R   ++G E  +  + NPF +M ++I L+ + NFFE RV+EYQ+   
Sbjct: 253 AKLMTQYLEFVTDRLLQELGCEKEYNVS-NPFDFM-DMISLQGKTNFFEKRVSEYQKAGV 310

Query: 122 L 122
           L
Sbjct: 311 L 311


>gi|254369307|ref|ZP_04985319.1| hypothetical protein FTAG_00272 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122257|gb|EDO66397.1| hypothetical protein FTAG_00272 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 410

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDES+H+     +      ENP++   EF+++   M  +A  LE  +       G + G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 338

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118
           L A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398

Query: 119 GAELKWD 125
           G    WD
Sbjct: 399 GLTGSWD 405


>gi|89256330|ref|YP_513692.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314778|ref|YP_763501.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156502403|ref|YP_001428469.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010840|ref|ZP_02275771.1| ribonucleotide-diphosphate reductase beta subunit [Francisella
           tularensis subsp. holarctica FSC200]
 gi|254367665|ref|ZP_04983686.1| biofunctional protein: glutaredoxin 3
           protein-ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. holarctica 257]
 gi|290952877|ref|ZP_06557498.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295313922|ref|ZP_06804487.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           URFT1]
 gi|89144161|emb|CAJ79423.1| Biofunctional protein, glutaredoxin 3
           protein/Ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. holarctica LVS]
 gi|115129677|gb|ABI82864.1| ribonucleoside-diphosphate reductase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134253476|gb|EBA52570.1| biofunctional protein: glutaredoxin 3
           protein-ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. holarctica 257]
 gi|156253006|gb|ABU61512.1| bifunctional glutaredoxin /ribonucleoside-diphosphate reductase
           beta subunit [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 410

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDES+H+     +      ENP++   EF+++   M  +A  LE  +       G + G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 338

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118
           L A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398

Query: 119 GAELKWD 125
           G    WD
Sbjct: 399 GLTGSWD 405


>gi|56707665|ref|YP_169561.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670136|ref|YP_666693.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           FSC198]
 gi|187931834|ref|YP_001891819.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|224456732|ref|ZP_03665205.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254370173|ref|ZP_04986179.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874478|ref|ZP_05247188.1| nrdB, biofunctional protein, glutaredoxin 3
           protein/ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|56604157|emb|CAG45165.1| Biofunctional protein, glutaredoxin 3
           protein/Ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. tularensis SCHU
           S4]
 gi|110320469|emb|CAL08548.1| Biofunctional protein, glutaredoxin 3
           protein/Ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151568417|gb|EDN34071.1| hypothetical protein FTBG_01287 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|187712743|gb|ACD31040.1| bifunctional protein: glutaredoxin 3/ribonucleotide reductase beta
           subunit [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|254840477|gb|EET18913.1| nrdB, biofunctional protein, glutaredoxin 3
           protein/ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282158827|gb|ADA78218.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 410

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDES+H+     +      ENP++   EF+++   M  +A  LE  +       G + G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 338

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118
           L A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398

Query: 119 GAELKWD 125
           G    WD
Sbjct: 399 GLTGSWD 405


>gi|262277047|ref|ZP_06054840.1| ribonucleoside-diphosphate reductase, beta subunit [alpha
           proteobacterium HIMB114]
 gi|262224150|gb|EEY74609.1| ribonucleoside-diphosphate reductase, beta subunit [alpha
           proteobacterium HIMB114]
          Length = 342

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWT----KEFQQKSRTML-HEATLLEIAYAHETMPK 55
           +RDE+LH N  I + N    ENP L      KE     RT++ HE   +++A+  E  P 
Sbjct: 209 VRDETLHCNSMIKIFNTFCAENPGLLDESLKKEITDACRTIVEHEDAFIDLAF--EMGP- 265

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL A   + Y+++IANRR  Q+ L+ ++   ENP  W+  +++  +  NFFE R TE
Sbjct: 266 -IEGLTAQQIKDYIRWIANRRLVQLKLDEIYDVKENPLEWIDTMLNGVEHMNFFEGRATE 324

Query: 116 YQQGA 120
           Y + +
Sbjct: 325 YSKAS 329


>gi|134301991|ref|YP_001121960.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|134049768|gb|ABO46839.1| biofunctional glutaredoxin 3 protein/Ribonucleoside-diphosphate
           reductase beta subunit [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 410

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDES+H+     +      ENP++   EF+++   M  +A  LE  +       G + G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 338

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118
           L A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398

Query: 119 GAELKWD 125
           G    WD
Sbjct: 399 GLTGSWD 405


>gi|153940168|ref|YP_001392091.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum F str. Langeland]
 gi|170756361|ref|YP_001782419.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum B1 str. Okra]
 gi|152936064|gb|ABS41562.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum F str. Langeland]
 gi|169121573|gb|ACA45409.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum B1 str. Okra]
 gi|322807123|emb|CBZ04697.1| ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Clostridium botulinum H04402 065]
          Length = 342

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K EN H++T+E +++ R M+      EI +         +GLN
Sbjct: 214 RDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRMGVEHEIQWGQYVTNNEILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y+++++N R   IGL+PL+ +  ++P  W+     L   K +FFE +VT Y + 
Sbjct: 274 DELIEKYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|146298285|ref|YP_001192876.1| ribonucleoside-diphosphate reductase [Flavobacterium johnsoniae
           UW101]
 gi|146152703|gb|ABQ03557.1| Ribonucleoside-diphosphate reductase [Flavobacterium johnsoniae
           UW101]
          Length = 325

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 72/124 (58%), Gaps = 8/124 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F +       + N HL  K  +++ + ++ +A  +E  +  E++P   +G+N
Sbjct: 198 RDEGVHCDFAV------HLHNHHLVNKVPKERIKEIIVDALDIERQFVTESLPVSLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R   ++G E ++  + NPF +M ++I L+ + NFFE RV EYQ+   
Sbjct: 252 AGLMTQYLEFVADRLLVELGCERVYG-SANPFDFM-DMISLQGKTNFFEKRVAEYQKSGV 309

Query: 122 LKWD 125
           +  D
Sbjct: 310 MNTD 313


>gi|282849773|ref|ZP_06259157.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           parvula ATCC 17745]
 gi|282580710|gb|EFB86109.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           parvula ATCC 17745]
          Length = 342

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I +++ E P L+T E + K   M+ +    EIA+         +GLN
Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWGQYITDDKILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y++++AN R   IGL  L+ +  ENP  W+    +L   K +FFE +VT Y + 
Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKENPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|51891459|ref|YP_074150.1| ribonucleoside-diphosphate reductase beta subunit [Symbiobacterium
           thermophilum IAM 14863]
 gi|51855148|dbj|BAD39306.1| ribonucleoside-diphosphate reductase beta subunit [Symbiobacterium
           thermophilum IAM 14863]
          Length = 346

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 1/125 (0%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+    +++N ++ E P L+T +     R M+ +A   E+A+A   +     GL+
Sbjct: 220 RDEITHVAVFQNILNGLRQERPQLFTPQLDADLRAMIRQAAEHEMAWAAYCVGNRIQGLS 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               + Y++ +A++R   +G EPL+    NP  W+    +L + K +FFETRVT Y +  
Sbjct: 280 GEVLQGYVKHLADQRARALGFEPLYGNHPNPIKWVESFSNLNQTKADFFETRVTNYAKST 339

Query: 121 ELKWD 125
            +  D
Sbjct: 340 NIDLD 344


>gi|41054952|ref|NP_955770.1| ribonucleoside-diphosphate reductase subunit M2 B [Mus musculus]
 gi|81885688|sp|Q6PEE3|RIR2B_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B;
           AltName: Full=TP53-inducible ribonucleotide reductase M2
           B; AltName: Full=p53-inducible ribonucleotide reductase
           small subunit 2-like protein; Short=p53R2
 gi|34786000|gb|AAH58103.1| Ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus]
 gi|74218244|dbj|BAE23760.1| unnamed protein product [Mus musculus]
          Length = 351

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  + + R ++ +A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEDRVREIIADAVQIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CVLMKQYIEFVADRLLGELGFSKIFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335


>gi|114799612|ref|YP_759103.1| ribonucleotide-diphosphate reductase subunit beta [Hyphomonas
           neptunium ATCC 15444]
 gi|114739786|gb|ABI77911.1| ribonucleoside-diphosphate reductase, beta subunit [Hyphomonas
           neptunium ATCC 15444]
          Length = 345

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 67/121 (55%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    I + +    E   + T E +++ R        LE  +       G V G
Sbjct: 197 IRDESLHCEGMIKLFHSFCAETGVM-TDELRERIRDCCRTVVALEDKFIELAFEMGPVEG 255

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           + A   + Y+++IA+ R +Q+ LEP++  T++P PW++E+++  +  NFFE R TEY +G
Sbjct: 256 MTADDIKNYIRYIADWRLNQLKLEPIYGVTKHPIPWLTEILNGVEHANFFEQRSTEYSKG 315

Query: 120 A 120
           A
Sbjct: 316 A 316


>gi|168184457|ref|ZP_02619121.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum Bf]
 gi|237796249|ref|YP_002863801.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium
           botulinum Ba4 str. 657]
 gi|182672468|gb|EDT84429.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum Bf]
 gi|229263158|gb|ACQ54191.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum Ba4 str. 657]
          Length = 342

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K EN H++T+E +++ R M+      EI +         +GLN
Sbjct: 214 RDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRIGVEHEIQWGQYVTNNEILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y+++++N R   IGL+PL+ +  ++P  W+     L   K +FFE +VT Y + 
Sbjct: 274 DELIERYIKYLSNLRLVAIGLKPLYLEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|322510876|gb|ADX06189.1| putative ribonucleotide reductase small subunit [Organic Lake
           phycodnavirus 2]
          Length = 324

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 71/116 (61%), Gaps = 9/116 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+LH  F + + N+++        K  ++K R ++ EA  +E  +  + +P   +G+N
Sbjct: 201 RDEALHTEFAVYLYNRLE-------KKLNKKKVREIIEEAVTIEKEFIVDALPCRMIGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
           +    QY++F+A+R   Q+G + ++  T NPF +M E+I L+++ NFFE+RV+EY 
Sbjct: 254 SELMTQYIEFVADRLMMQLGCDVIYA-TNNPFDFM-ELISLEQKTNFFESRVSEYS 307


>gi|168179222|ref|ZP_02613886.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum NCTC 2916]
 gi|182669722|gb|EDT81698.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum NCTC 2916]
          Length = 342

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K EN H++T+E +++ R M+      EI +         +GLN
Sbjct: 214 RDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRIGVEHEIQWGQYVTNNEILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y+++++N R   IGL+PL+ +  ++P  W+     L   K +FFE +VT Y + 
Sbjct: 274 DELIERYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|27769295|gb|AAH42468.1| Similar to ribonucleotide reductase M2 polypeptide [Homo sapiens]
          Length = 285

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 160 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 212

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 213 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 269


>gi|150024561|ref|YP_001295387.1| ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium
           psychrophilum JIP02/86]
 gi|149771102|emb|CAL42569.1| Ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium
           psychrophilum JIP02/86]
          Length = 325

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 72/124 (58%), Gaps = 8/124 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F +       + N HL  K  +++ R+++ +A  +E  +  E++P   +G+N
Sbjct: 198 RDEGVHCDFAV------HLHNHHLVNKVPKERIRSIIVDALNIEREFITESLPVSLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R   ++G +  +  T NPF +M ++I L+ + NFFE +V EYQ+   
Sbjct: 252 AVLMTQYLEFVADRLLVELGCDREYN-TANPFDFM-DMISLQGKTNFFEKKVAEYQKAGV 309

Query: 122 LKWD 125
           +  D
Sbjct: 310 MNTD 313


>gi|319942042|ref|ZP_08016361.1| ribonucleoside-diphosphate reductase subunit beta [Sutterella
           wadsworthensis 3_1_45B]
 gi|319804426|gb|EFW01304.1| ribonucleoside-diphosphate reductase subunit beta [Sutterella
           wadsworthensis 3_1_45B]
          Length = 344

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 10/125 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55
           + DE+LH      +  +   ENP LWT E + K    +  M+  E   +++A+    M +
Sbjct: 211 IADETLHTESMTKIFREYITENPELWTDELKAKIYGIAEVMVDLEDKFIDLAFGVSEMKR 270

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
               L       Y+++IA+RR   +GL+ +FK T NP PW+  ++ +    NFFE RV +
Sbjct: 271 ----LTREDVRSYIRYIADRRLMGLGLKGIFKSTTNPLPWVDAMLGV-THTNFFENRVVD 325

Query: 116 YQQGA 120
           Y +GA
Sbjct: 326 YAKGA 330


>gi|114621164|ref|XP_001153859.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
 gi|332214017|ref|XP_003256123.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           [Nomascus leucogenys]
 gi|332830969|ref|XP_003311933.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Pan
           troglodytes]
 gi|119612248|gb|EAW91842.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_c [Homo
           sapiens]
 gi|194385642|dbj|BAG65196.1| unnamed protein product [Homo sapiens]
          Length = 297

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 172 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 224

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 225 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 281


>gi|289177076|ref|NP_001165949.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 3 [Homo
           sapiens]
 gi|55631160|ref|XP_528204.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
           isoform 3 [Pan troglodytes]
 gi|42794058|dbj|BAD11774.1| p53-inducible ribonucleotide reductase small subunit 2 long form
           [Homo sapiens]
 gi|119612246|gb|EAW91840.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_a [Homo
           sapiens]
          Length = 299

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 174 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 226

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 227 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 283


>gi|75076588|sp|Q4R741|RIR2B_MACFA RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B
 gi|67969468|dbj|BAE01083.1| unnamed protein product [Macaca fascicularis]
          Length = 351

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVQIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CILMKQYIEFVADRLLVELGFSKIFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335


>gi|195953600|ref|YP_002121890.1| Ribonucleoside-diphosphate reductase [Hydrogenobaculum sp. Y04AAS1]
 gi|195933212|gb|ACG57912.1| Ribonucleoside-diphosphate reductase [Hydrogenobaculum sp. Y04AAS1]
          Length = 319

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 68/114 (59%), Gaps = 6/114 (5%)

Query: 1   MRDESLHLNFGIDVINQI-KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
           ++DE+ HL FGI ++N++ K +N +    +++ K R ++ EA  +E  YA   MP+  +G
Sbjct: 209 LKDETRHLAFGIYLLNELLKDKNKN----DYKDKFRVLMEEAVDIETEYARVAMPEKIIG 264

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 113
           L+  +   Y++++A+RR   +G + ++   +NP  W++   DL    NFFE +V
Sbjct: 265 LSFETYTSYVKYLADRRMRSLGFDAIYG-QKNPMKWLTTQTDLPDLTNFFEAKV 317


>gi|197101489|ref|NP_001125944.1| ribonucleoside-diphosphate reductase subunit M2 B [Pongo abelii]
 gi|75041724|sp|Q5R9G0|RIR2B_PONAB RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B
 gi|55729743|emb|CAH91600.1| hypothetical protein [Pongo abelii]
          Length = 351

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335


>gi|42544136|ref|NP_056528.2| ribonucleoside-diphosphate reductase subunit M2 B isoform 1 [Homo
           sapiens]
 gi|114621161|ref|XP_001153916.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
           isoform 2 [Pan troglodytes]
 gi|74727333|sp|Q7LG56|RIR2B_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B;
           AltName: Full=TP53-inducible ribonucleotide reductase M2
           B; AltName: Full=p53-inducible ribonucleotide reductase
           small subunit 2-like protein; Short=p53R2
 gi|261278726|pdb|3HF1|A Chain A, Crystal Structure Of Human P53r2
 gi|261278727|pdb|3HF1|B Chain B, Crystal Structure Of Human P53r2
 gi|7229086|dbj|BAA92434.1| ribonucleotide reductase [Homo sapiens]
 gi|7229115|dbj|BAA92493.1| ribonucleotide reductase [Homo sapiens]
 gi|45259569|dbj|BAD12267.1| p53-inducible ribonucleotide reductase small subunit 2 [Homo
           sapiens]
 gi|52545612|emb|CAB70703.2| hypothetical protein [Homo sapiens]
 gi|63055293|gb|AAY29059.1| ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
 gi|80473666|gb|AAI08262.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
 gi|109659128|gb|AAI17497.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
 gi|119612247|gb|EAW91841.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_b [Homo
           sapiens]
 gi|120660296|gb|AAI30629.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
 gi|190689549|gb|ACE86549.1| ribonucleotide reductase M2 B (TP53 inducible) protein [synthetic
           construct]
 gi|190690911|gb|ACE87230.1| ribonucleotide reductase M2 B (TP53 inducible) protein [synthetic
           construct]
 gi|261859014|dbj|BAI46029.1| ribonucleotide reductase M2 B [synthetic construct]
 gi|313882916|gb|ADR82944.1| ribonucleotide reductase M2 B (TP53 inducible) [synthetic
           construct]
          Length = 351

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335


>gi|148380773|ref|YP_001255314.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. ATCC 3502]
 gi|153932443|ref|YP_001385057.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. ATCC 19397]
 gi|153934989|ref|YP_001388527.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. Hall]
 gi|148290257|emb|CAL84376.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           botulinum A str. ATCC 3502]
 gi|152928487|gb|ABS33987.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. ATCC 19397]
 gi|152930903|gb|ABS36402.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. Hall]
          Length = 342

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K EN H++T+E +++ R M+      EI +         +GLN
Sbjct: 214 RDEVTHLVLFQNIIKELKNENLHIFTEELEEEFRQMMRMGVEHEIQWGQYVTNNEILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y+++++N R   IGL+PL+ +  ++P  W+     L   K +FFE +VT Y + 
Sbjct: 274 DELIEKYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|255551489|ref|XP_002516790.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis]
 gi|223543878|gb|EEF45404.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis]
          Length = 342

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 67/120 (55%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQ-QKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE LH +F   + +        L  K+ Q QK + ++HEA  +E  +  + +P   +G+
Sbjct: 213 RDEGLHCDFACLLYS--------LLQKQLQWQKVQQIVHEAVEIETEFVCDALPCALIGM 264

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N+    QY++F+A+R    +G +  +   ENPF WM E I L+ + NFFE RV +YQ+ +
Sbjct: 265 NSTLMSQYIKFVADRLLVALGYQRKYN-VENPFDWM-EFISLQGKANFFERRVGDYQKAS 322


>gi|170761039|ref|YP_001788131.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169408028|gb|ACA56439.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A3 str. Loch Maree]
          Length = 342

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K EN H++T+E +++ R M+      EI +         +GLN
Sbjct: 214 RDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRMGVEHEIQWGQYVTNNEILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y+++++N R   IGL+PL+ +  ++P  W+     L   K +FFE +VT Y + 
Sbjct: 274 DELIERYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDGFSKLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|296227442|ref|XP_002759378.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           isoform 2 [Callithrix jacchus]
          Length = 299

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 174 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 226

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G    F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 227 CILMKQYIEFVADRLLVELGFSKFFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 283


>gi|332184137|gb|AEE26391.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Francisella cf. novicida 3523]
          Length = 410

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDES+H+     +      ENP++   +F+++   M  +A  LE  +       G + G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNQFKKEIYLMASKAVELEDKFIELAYELGTIEG 338

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118
           L A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398

Query: 119 GAELKWD 125
           G    WD
Sbjct: 399 GLTGSWD 405


>gi|269798663|ref|YP_003312563.1| ribonucleotide reductase [Veillonella parvula DSM 2008]
 gi|294792661|ref|ZP_06757808.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           6_1_27]
 gi|269095292|gb|ACZ25283.1| ribonucleotide reductase [Veillonella parvula DSM 2008]
 gi|294456560|gb|EFG24923.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           6_1_27]
          Length = 342

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I +++ E P L+T E + K   M+ +    EIA+         +GLN
Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWGQYITDDKILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y++++AN R   IGL  L+ +  +NP  W+    +L   K +FFE +VT Y + 
Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|238018468|ref|ZP_04598894.1| hypothetical protein VEIDISOL_00295 [Veillonella dispar ATCC 17748]
 gi|237864939|gb|EEP66229.1| hypothetical protein VEIDISOL_00295 [Veillonella dispar ATCC 17748]
          Length = 342

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I +++ E P L+T E + K   M+ +    EIA+         +GLN
Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWGQYITDDKILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y++++AN R   IGL  L+ +  +NP  W+    +L   K +FFE +VT Y + 
Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|7023557|dbj|BAA92005.1| unnamed protein product [Homo sapiens]
          Length = 351

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGVN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335


>gi|303228685|ref|ZP_07315510.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           atypica ACS-134-V-Col7a]
 gi|303230495|ref|ZP_07317254.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           atypica ACS-049-V-Sch6]
 gi|302514861|gb|EFL56844.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           atypica ACS-049-V-Sch6]
 gi|302516665|gb|EFL58582.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           atypica ACS-134-V-Col7a]
          Length = 342

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I +++ E P L+T E + K   M+ +    EIA+         +GLN
Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWGQYITDDKILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y++++AN R   IGL  L+ +  +NP  W+    +L   K +FFE +VT Y + 
Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|296227440|ref|XP_002759377.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           isoform 1 [Callithrix jacchus]
          Length = 351

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G    F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CILMKQYIEFVADRLLVELGFSKFFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335


>gi|189501948|ref|YP_001957665.1| hypothetical protein Aasi_0535 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497389|gb|ACE05936.1| hypothetical protein Aasi_0535 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 355

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++ +A  +E  +  + +P   +G+N
Sbjct: 226 RDEGLHCDFACLLYAN------HLQNKLPEERVREIITDAVAIEKEFVTDALPVKLIGMN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R   ++G   ++  T NPF +M E+I L+ + NFFE RV EYQ+   
Sbjct: 280 ADLMSQYIEFVADRLLLELGCSKVYNAT-NPFDFM-EMISLQGKTNFFEKRVGEYQKAGV 337

Query: 122 LK 123
           +K
Sbjct: 338 MK 339


>gi|288817346|ref|YP_003431693.1| ribonucleotide reductase beta subunit [Hydrogenobacter thermophilus
           TK-6]
 gi|288786745|dbj|BAI68492.1| ribonucleotide reductase beta subunit [Hydrogenobacter thermophilus
           TK-6]
 gi|308750953|gb|ADO44436.1| ribonucleotide reductase [Hydrogenobacter thermophilus TK-6]
          Length = 342

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 67/125 (53%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+    ++I  IK ENP L+T E ++        AT  EI +         +G+N
Sbjct: 218 RDELTHVTLFRNIIQTIKQENPELFTPELEKWVYEFFKYATDAEIKWGQYVTQNQILGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               ++Y++++AN R  Q+G +PL+ + TENP  W+ +   +   K +FF+ +   Y + 
Sbjct: 278 NTLIDRYIKYLANLRLTQLGYKPLYPEITENPMKWIDQFRTINDTKTDFFQAKPQTYAKR 337

Query: 120 AELKW 124
           +ELKW
Sbjct: 338 SELKW 342


>gi|254456975|ref|ZP_05070403.1| ribonucleoside-diphosphate reductase, beta subunit
           [Campylobacterales bacterium GD 1]
 gi|207085767|gb|EDZ63051.1| ribonucleoside-diphosphate reductase, beta subunit
           [Campylobacterales bacterium GD 1]
          Length = 340

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+T + +++   M  EA  LE  +         +GL 
Sbjct: 215 RDEVTHLVLFQNLINTLRKERPDLFTDKLKEEVIAMFKEAVQLESEWGKYITQGQILGLT 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               EQY++F+A+ R   +G E L+  T NP  W+ +      +K NFFE  VT Y +G+
Sbjct: 275 NDIVEQYIKFLADERLTAVGFEKLYNVT-NPIKWVDDFAKFNDQKTNFFEGTVTNYSKGS 333


>gi|325181522|emb|CCA15972.1| ribonucleosidediphosphate reductase small chain put [Albugo
           laibachii Nc14]
          Length = 1611

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 69/121 (57%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +++  + P       +     ++ +A ++E  +  +++P   +G+N
Sbjct: 264 RDEGLHCDFACLMYSKLVNKLP-------EASIHAIISDAVVIEQEFVRDSLPVELIGMN 316

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R  H +G+  L+ +T NPF WM ++I L+ + NFFE RV EY +   
Sbjct: 317 SSLMGQYIEFVADRLLHALGVSKLY-HTSNPFDWM-DMISLQGKTNFFEKRVGEYAKSGT 374

Query: 122 L 122
           +
Sbjct: 375 I 375


>gi|291388369|ref|XP_002710634.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
           [Oryctolagus cuniculus]
          Length = 339

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++  A  +E  +  E +P G +G+N
Sbjct: 214 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 266

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 267 CILMKQYIEFVADRLLMELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 323


>gi|241166485|ref|XP_002409876.1| ribonucleotide reductase, beta subunit, putative [Ixodes
           scapularis]
 gi|215494664|gb|EEC04305.1| ribonucleotide reductase, beta subunit, putative [Ixodes
           scapularis]
          Length = 376

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K  Q + R ++ +A ++E  +  + +P   +G+N
Sbjct: 251 RDEGLHTDFACLMFS-------HLVNKPSQARVRQIICDAVVIEQEFLTDALPVALIGMN 303

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               ++Y++F+A+R   ++G E ++  +ENPF +M E I L+ + NFFE RV EYQ+  
Sbjct: 304 CELMKRYIEFVADRLLVELGCEKVYN-SENPFDFM-EHISLEGKTNFFEKRVGEYQKAG 360


>gi|289177074|ref|NP_001165948.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 2 [Homo
           sapiens]
          Length = 423

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 298 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 350

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 351 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 407


>gi|327269406|ref|XP_003219485.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           [Anolis carolinensis]
          Length = 414

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++  A  +E  +  E +P G +G+N
Sbjct: 289 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 341

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 342 CTLMKQYIEFVADRLLLELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 398


>gi|50949848|emb|CAH10473.1| hypothetical protein [Homo sapiens]
          Length = 297

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 172 RDEGLHCDFACLMFQ-------YLVNKPPEERVREIIVDAVKIEQEFLTEALPVGLIGMN 224

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 225 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 281


>gi|256081213|ref|XP_002576867.1| ribonucleoside-diphosphate reductase small chain [Schistosoma
           mansoni]
 gi|238662153|emb|CAZ33104.1| ribonucleoside-diphosphate reductase small chain, putative
           [Schistosoma mansoni]
          Length = 365

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   I  + P       +++  +++ EA L+E  +  E +P   +G+N
Sbjct: 237 RDEGLHCDFACLLFKHIIKKPP-------KERVESIIREAVLIEQEFLSEALPVSLIGMN 289

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++FIA+R   ++G E ++ +++NPF +M E I ++ + NFFE RV EYQ+  
Sbjct: 290 CKLMCQYIEFIADRLLVELGYEKMY-HSDNPFDFM-ENISIEGKTNFFEKRVGEYQRAG 346


>gi|1710401|sp|P49730|RIR2_TOBAC RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleoside-diphosphate reductase R2
           subunit; AltName: Full=Ribonucleotide reductase small
           subunit
 gi|1044912|emb|CAA63194.1| ribonucleotide reductase R2 [Nicotiana tabacum]
          Length = 329

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++       TK  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 200 RDEGLHCDFACLLYSLLR-------TKLTEERVKGIVADAVEIEREFVCDALPCALVGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                +Y++F+A+R    +G + L+   +NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 253 GDLMSKYIEFVADRLLDALGYDKLYN-AQNPFDWM-ELISLQGKTNFFEKRVGEYQKAS 309


>gi|194673004|ref|XP_607398.4| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos
           taurus]
 gi|297482473|ref|XP_002692807.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like [Bos
           taurus]
 gi|296480530|gb|DAA22645.1| ribonucleotide reductase M2 polypeptide-like [Bos taurus]
          Length = 351

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++  A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CVLMKQYIEFVADRLLTELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335


>gi|281200507|gb|EFA74725.1| ribonucleotide reductase small subunit [Polysphondylium pallidum
           PN500]
          Length = 335

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 70/124 (56%), Gaps = 13/124 (10%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
           RDE LH +F   +  ++  K++N  +          T++ +A   E  +  E++P   +G
Sbjct: 201 RDEGLHCDFACLLYQKLQNKLDNNTI---------ETIIRDAVACEKEFITESLPVDLIG 251

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +N+ S  QY++F A+R    +G + ++  + NPF WM E+I L+++ NFFE +V+EYQ+ 
Sbjct: 252 MNSRSMSQYIEFCADRLLLSLGYKKIYN-SSNPFDWM-EMISLQRKTNFFEGKVSEYQKS 309

Query: 120 AELK 123
              K
Sbjct: 310 GVAK 313


>gi|91215505|ref|ZP_01252476.1| probable ribonucleoside-diphosphate reductase small chain
           [Psychroflexus torquis ATCC 700755]
 gi|91186457|gb|EAS72829.1| probable ribonucleoside-diphosphate reductase small chain
           [Psychroflexus torquis ATCC 700755]
          Length = 326

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 69/119 (57%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F +       + N HL  +  +++ R ++ +A  +E  +  E++P   +G+N
Sbjct: 198 RDEGVHCDFAV------HLHNEHLVNQVPKERIRAIIVDALTIEREFVTESLPVSLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R   ++G +  +  T NPF +M ++I L+ + NFFE RV EYQ+  
Sbjct: 252 SNLMTQYLEFVADRLLFELGCDKEYG-TANPFDFM-DMISLQGKTNFFEKRVGEYQKAG 308


>gi|290995765|ref|XP_002680453.1| predicted protein [Naegleria gruberi]
 gi|284094074|gb|EFC47709.1| predicted protein [Naegleria gruberi]
          Length = 338

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 68/118 (57%), Gaps = 8/118 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K      +TK  QQ   ++++EA  +E  +  E++P   +G+N
Sbjct: 212 RDEGLHTDFACLLYSTLK------YTKLPQQVVHSLVYEAVEIEKEFISESLPVDLIGMN 265

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +   +QY++ +A+R    IG E ++  + NPF WM+ +I +  + NFFE +V EY + 
Sbjct: 266 SRLMQQYIEMVADRLLVSIGYEKIYN-SSNPFDWMN-IISVSGKTNFFEKKVGEYAKA 321


>gi|86134368|ref|ZP_01052950.1| ribonucleoside-diphosphate reductase small chain [Polaribacter sp.
           MED152]
 gi|85821231|gb|EAQ42378.1| ribonucleoside-diphosphate reductase small chain [Polaribacter sp.
           MED152]
          Length = 323

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F +       + N H+  +  + + + ++ +A  +E  +  E++P   +G+N
Sbjct: 198 RDEGMHCDFAV------HLHNNHIVNRVPKDRIKEIIVDALDIEREFVTESLPVSLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+ +R   + G E ++  T NPF +M E+I L+ + NFFE RV+EYQ+  
Sbjct: 252 AKLMTQYLEFVTDRLLLEFGCEKVYDVT-NPFDFM-EMISLEGKTNFFEKRVSEYQKAG 308


>gi|307719930|ref|YP_003891070.1| Ribonucleoside-diphosphate reductase [Sulfurimonas autotrophica DSM
           16294]
 gi|306978023|gb|ADN08058.1| Ribonucleoside-diphosphate reductase [Sulfurimonas autotrophica DSM
           16294]
          Length = 340

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+T E +     M  EA  LE  +         +GL 
Sbjct: 215 RDEVTHLVLFQNLINTLRKERPDLFTDELRADVIEMFKEAVKLETEWGKYITQGQILGLT 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               EQY+Q++A+ R + +G + L+  + NP  W+ +      +K NFFE  VT Y +G+
Sbjct: 275 DEIVEQYIQYLADDRLNSVGFDKLYNVS-NPIKWVDDFAKFNDQKTNFFEGTVTNYSKGS 333


>gi|253827828|ref|ZP_04870713.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter
           canadensis MIT 98-5491]
 gi|313142391|ref|ZP_07804584.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           canadensis MIT 98-5491]
 gi|253511234|gb|EES89893.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter
           canadensis MIT 98-5491]
 gi|313131422|gb|EFR49039.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           canadensis MIT 98-5491]
          Length = 341

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN +K E+P L+TK+ +++   M  EA  +E A+         +GL 
Sbjct: 217 RDEVTHLILFQNMINSVKKESPELFTKDLEEEVIEMFREAVKVETAWGEYITQGQILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   ++Y++++A+ R  +IGL  L+   ++P  W+       ++K NFFE  VT Y +G+
Sbjct: 277 SEIIQEYIKYLADERLRRIGLPTLYN-AKHPIKWVDSFSSFNEQKTNFFEGNVTNYAKGS 335


>gi|326792202|ref|YP_004310023.1| ribonucleotide reductase [Clostridium lentocellum DSM 5427]
 gi|326542966|gb|ADZ84825.1| ribonucleotide reductase [Clostridium lentocellum DSM 5427]
          Length = 342

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K ENP L+T+   ++ R M+      EIA+         +G+N
Sbjct: 214 RDEITHLVVFQNIIKELKKENPELFTESMIEEFREMMRVGVEHEIAWGQYVTANEIMGIN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               + Y+++++N+R   IGLE L+ + T +P  W+     L   K +FFE +VT Y + 
Sbjct: 274 DQLIDAYIKYLSNQRLKAIGLEELYPEITTHPMAWIDSFSKLNNTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|150015087|ref|YP_001307341.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           beijerinckii NCIMB 8052]
 gi|149901552|gb|ABR32385.1| Ribonucleoside-diphosphate reductase [Clostridium beijerinckii
           NCIMB 8052]
          Length = 344

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 2/123 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ ENP L+T+E + + R M+      EI + H  +     G+N
Sbjct: 218 RDENTHLWLFRNIIKELQNENPELFTEEVKNELRNMMKIGVEQEILWGHYVIGDKIQGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E Y++++ N+R  +I L PLFK  + NP  W+  + +    K +FFE R T Y + 
Sbjct: 278 KQLIENYIKYLGNKRLKEINLSPLFKEQDKNPASWVDTLSNANSVKTDFFEARSTAYAKV 337

Query: 120 AEL 122
             L
Sbjct: 338 TTL 340


>gi|300676950|gb|ADK26821.1| ribonucleotide reductase M2 [Zonotrichia albicollis]
          Length = 390

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A L+E  +  E +P   +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLIHKPSEERVREIIMNAVLIEQEFLTEALPVKLIGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQR 372


>gi|225850104|ref|YP_002730338.1| ribonucleoside-diphosphate reductase, beta subunit [Persephonella
           marina EX-H1]
 gi|225645787|gb|ACO03973.1| ribonucleoside-diphosphate reductase, beta subunit [Persephonella
           marina EX-H1]
          Length = 329

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 3/116 (2%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKE-FQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60
           DESLHL  GI+ I  I  ENP +   E F +  +  + +A  LE+ Y         + G+
Sbjct: 212 DESLHLQNGIEAILTIVEENPEIVDDEKFVENIKETIIDAVELELNYLKTKFGGTTIFGV 271

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
           +    E+YM++IA+RR  ++G +P FK  +NP  ++ +  D+KK  NFFE   TEY
Sbjct: 272 SYKELEKYMKYIADRRLEELGFDPQFKIDQNPLKFLQKE-DVKKLTNFFEVSSTEY 326


>gi|120437796|ref|YP_863482.1| ribonucleoside-diphosphate reductase small chain [Gramella forsetii
           KT0803]
 gi|117579946|emb|CAL68415.1| ribonucleoside-diphosphate reductase small chain [Gramella forsetii
           KT0803]
          Length = 325

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 8/124 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F + + NQ      HL  +  ++K R +L +A  +E  +  E++P   +G+N
Sbjct: 198 RDEGMHCDFAVHLHNQ------HLVNQVPKEKIREILIDALNIEREFVTESLPVSLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+ +R   ++  E  +  + NPF +M ++I+L+ + NFFE RV+EYQ+   
Sbjct: 252 AKLMTQYLEFVTDRLLVELDCEKEYNVS-NPFDFM-DMINLQGKTNFFEKRVSEYQKAGV 309

Query: 122 LKWD 125
           +  D
Sbjct: 310 MNKD 313


>gi|224418874|ref|ZP_03656880.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           canadensis MIT 98-5491]
          Length = 340

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN +K E+P L+TK+ +++   M  EA  +E A+         +GL 
Sbjct: 216 RDEVTHLILFQNMINSVKKESPELFTKDLEEEVIEMFREAVKVETAWGEYITQGQILGLT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   ++Y++++A+ R  +IGL  L+   ++P  W+       ++K NFFE  VT Y +G+
Sbjct: 276 SEIIQEYIKYLADERLRRIGLPTLYN-AKHPIKWVDSFSSFNEQKTNFFEGNVTNYAKGS 334


>gi|78776214|ref|YP_392529.1| ribonucleotide-diphosphate reductase subunit beta [Sulfurimonas
           denitrificans DSM 1251]
 gi|78496754|gb|ABB43294.1| Ribonucleoside-diphosphate reductase [Sulfurimonas denitrificans
           DSM 1251]
          Length = 340

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+ ++ +++   M  EA  LE+A+         +GL 
Sbjct: 215 RDEVTHLVLFQNLINSLRKERPDLFNEKLKEEVIEMFKEAVALEVAWGKYITGGQILGLT 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               EQY+Q++A+ R   +G   L+  T NP  W+ +      +K NFFE  V  Y +G+
Sbjct: 275 DAIIEQYIQYLADDRLTSVGFAKLYNVT-NPIKWVDDFSKFNDQKTNFFEGTVANYSKGS 333


>gi|118443949|ref|YP_878438.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           novyi NT]
 gi|118134405|gb|ABK61449.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           novyi NT]
          Length = 342

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 68/126 (53%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K ENP ++T+   ++ R M+      EI +         +G+N
Sbjct: 214 RDEITHLILFQNIIKELKNENPDIFTESIMEEFRMMMKMGVEHEIKWGQYVTNNEILGIN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y+++++N R + IGLE L+ + TE+P  W+     L   K +FFE +VT Y + 
Sbjct: 274 DNLIEKYIKYLSNLRLNAIGLEVLYPEITEHPMEWIENFSKLNNTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|118087248|ref|XP_418364.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 353

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       +L  +  +++ R ++  A  +E  +  E +P G +G+N
Sbjct: 228 RDEGLHCDFACLMFH-------YLVNRPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F + ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 281 CTLMKQYIEFVADRLLMELGFSKVF-HAENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 337


>gi|313683656|ref|YP_004061394.1| ribonucleotide reductase [Sulfuricurvum kujiense DSM 16994]
 gi|313156516|gb|ADR35194.1| ribonucleotide reductase [Sulfuricurvum kujiense DSM 16994]
          Length = 339

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T+E  ++   M  +A  LE A+         +GL 
Sbjct: 215 RDEVTHLVLFQNIINTLRRERSDLFTEELIEEVYDMFRKAVELETAWGKYITQGQILGLT 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               EQY+Q++A++R   +GL+PL+    +P  W+ +      +K NFFE  VT Y +G+
Sbjct: 275 NEIVEQYIQYLADQRLTAVGLKPLYN-VSHPIKWVDDFSKFNDQKTNFFEGTVTNYSKGS 333


>gi|194036959|ref|XP_001925036.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Sus
           scrofa]
          Length = 351

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  + + R ++  A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEARVREIIVNAVEIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CVLMKQYIEFVADRLLTELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335


>gi|45268714|dbj|BAD12266.1| p53-inducible ribonucleotide reductase small subunit 2 short form
           gamma [Homo sapiens]
          Length = 139

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           +DE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 14  QDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 66

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 67  CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 123


>gi|242309209|ref|ZP_04808364.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pullorum MIT 98-5489]
 gi|239524250|gb|EEQ64116.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pullorum MIT 98-5489]
          Length = 341

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 66/120 (55%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN  K E+P  +TK+ +++   M  EA  +EIA+         +GL 
Sbjct: 217 RDEVTHLLLFQNMINSTKKESPEFFTKDLEEEVLEMFREAVKVEIAWGEYITQGQILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           A   ++Y++++A+ R  ++GL P+    ++P  W+       ++K NFFE  VT Y +G+
Sbjct: 277 AEIIQEYIKYLADDRLRRVGL-PVLYNAKHPIKWVDSFSSFNEQKTNFFEGNVTNYAKGS 335


>gi|227498392|ref|ZP_03928542.1| ribonucleoside-diphosphate reductase [Acidaminococcus sp. D21]
 gi|226903854|gb|EEH89772.1| ribonucleoside-diphosphate reductase [Acidaminococcus sp. D21]
          Length = 342

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    +++ +++ E P L+TKE       M+ +    EI +         +GLN
Sbjct: 214 RDEVTHLILFQNILRELRHERPDLFTKEQDAHIADMIRQGAENEIKWGQYITDDKILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y++++AN R   IGL PL+ + ++NP  W+    +L   K +FFE +VT Y + 
Sbjct: 274 NGLIEKYIKYLANIRLEAIGLAPLYPEISQNPMEWIESFSNLNGTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|257067181|ref|YP_003153437.1| ribonucleotide-diphosphate reductase subunit beta [Anaerococcus
           prevotii DSM 20548]
 gi|256799061|gb|ACV29716.1| Ribonucleoside-diphosphate reductase [Anaerococcus prevotii DSM
           20548]
          Length = 352

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 4/123 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +IN +K E   L+  E Q   R ML E    EIA+   ++     GLN
Sbjct: 224 RDENTHLWLFRSLINDLKKEREDLFVPELQNYYREMLKEGVEQEIAWGKYSIGNSIAGLN 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y++++ N R   +GLEPL++ Y E P    W+ E  D    K +FFE +VT Y 
Sbjct: 284 EKMIEDYIKYLGNLRAKGLGLEPLYEGYKEIPESMKWVDEYSDPNGVKTDFFEAKVTAYS 343

Query: 118 QGA 120
           + +
Sbjct: 344 KSS 346


>gi|289548460|ref|YP_003473448.1| ribonucleoside-diphosphate reductase [Thermocrinis albus DSM 14484]
 gi|289182077|gb|ADC89321.1| Ribonucleoside-diphosphate reductase [Thermocrinis albus DSM 14484]
          Length = 342

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H++   ++I  +K ENP L+T E ++  +     A   EI +         +G+N
Sbjct: 218 RDELTHVSLFRNIILTLKKENPELFTPEMEKWVKEFFRYAASEEIKWGQYVTRNQILGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               ++Y++++AN R  QIG EP+F   TENP  W+     +   K +FF+ +   Y + 
Sbjct: 278 DQLIDRYIKYLANLRLTQIGYEPVFPDVTENPMKWIDTFRTINDTKTDFFQAKPQTYAKR 337

Query: 120 AELKW 124
           +ELKW
Sbjct: 338 SELKW 342


>gi|326917964|ref|XP_003205263.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           [Meleagris gallopavo]
          Length = 353

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       +L  +  +++ R ++  A  +E  +  E +P G +G+N
Sbjct: 228 RDEGLHCDFACLMFH-------YLVNRPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F + ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 281 CTLMKQYIEFVADRLLMELGFSKVF-HAENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 337


>gi|118089007|ref|XP_419948.2| PREDICTED: similar to small subunit ribonucleotide reductase
           isoform 2 [Gallus gallus]
          Length = 384

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ + ++  A L+E  +  E +P   +G+N
Sbjct: 259 RDEGLHCDFACLMFK-------HLIRKPSEERVKEIIMNAVLIEQEFLTEALPVKLIGMN 311

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 312 CTLMKQYIEFVADRLMLELGFRKIYK-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 366


>gi|7106399|ref|NP_033130.1| ribonucleoside-diphosphate reductase subunit M2 [Mus musculus]
 gi|132626|sp|P11157|RIR2_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|22218698|pdb|1H0N|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase
           To Model The Reactive Diferrous State
 gi|22218699|pdb|1H0O|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase
           To Model The Reactive Diferrous State
 gi|52696260|pdb|1W68|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase
           Subunit R2 Under Oxidizing Conditions. A Fully Occupied
           Dinuclear Iron Cluster.
 gi|52696261|pdb|1W69|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase
           Subunit R2 Under Reducing Conditions. A Fully Occupied
           Dinuclear Iron Cluster And Bound Acetate.
 gi|157834262|pdb|1XSM|A Chain A, Protein R2 Of Ribonucleotide Reductase From Mouse
 gi|50720|emb|CAA33707.1| M2 ribonucleotide reductase [Mus musculus]
 gi|200768|gb|AAA40062.1| ribonucleotide reductase subunit M2 [Mus musculus]
 gi|26354034|dbj|BAC40647.1| unnamed protein product [Mus musculus]
 gi|54887418|gb|AAH85136.1| Ribonucleotide reductase M2 [Mus musculus]
 gi|74139292|dbj|BAE40793.1| unnamed protein product [Mus musculus]
 gi|74151119|dbj|BAE27683.1| unnamed protein product [Mus musculus]
 gi|74179887|dbj|BAE36508.1| unnamed protein product [Mus musculus]
 gi|74188932|dbj|BAE39238.1| unnamed protein product [Mus musculus]
 gi|74189151|dbj|BAE39331.1| unnamed protein product [Mus musculus]
 gi|74206394|dbj|BAE24918.1| unnamed protein product [Mus musculus]
 gi|74211991|dbj|BAE40165.1| unnamed protein product [Mus musculus]
          Length = 390

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ R ++  A  +E  +  E +P   +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPAEQRVREIITNAVRIEQEFLTEALPVKLIGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 372


>gi|281340156|gb|EFB15740.1| hypothetical protein PANDA_011632 [Ailuropoda melanoleuca]
          Length = 336

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++  A  +E  +  E +P G +G+N
Sbjct: 211 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+ A
Sbjct: 264 CVLMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVAEYQRFA 320


>gi|118089009|ref|XP_001231545.1| PREDICTED: similar to small subunit ribonucleotide reductase
           isoform 1 [Gallus gallus]
          Length = 392

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ + ++  A L+E  +  E +P   +G+N
Sbjct: 267 RDEGLHCDFACLMFK-------HLIRKPSEERVKEIIMNAVLIEQEFLTEALPVKLIGMN 319

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 320 CTLMKQYIEFVADRLMLELGFRKIYK-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 374


>gi|74207686|dbj|BAE40088.1| unnamed protein product [Mus musculus]
          Length = 390

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ R ++  A  +E  +  E +P   +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPAEQRVREIITNAVRIEQEFLTEALPVKLIGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 372


>gi|326916502|ref|XP_003204546.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Meleagris gallopavo]
          Length = 339

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ + ++  A L+E  +  E +P   +G+N
Sbjct: 214 RDEGLHCDFACLMFK-------HLIRKPSEERVKEIIMNAVLIEQEFLTEALPVKLIGMN 266

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 267 CTLMKQYIEFVADRLMLELGFRKIYK-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 321


>gi|241668401|ref|ZP_04755979.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876934|ref|ZP_05249644.1| glutaredoxin 3/ribonucleotide reductase beta subunit [Francisella
           philomiragia subsp. philomiragia ATCC 25015]
 gi|254842955|gb|EET21369.1| glutaredoxin 3/ribonucleotide reductase beta subunit [Francisella
           philomiragia subsp. philomiragia ATCC 25015]
          Length = 410

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDES+H+     +      ENP++   +F+++   M  +A  LE  +       G + G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNQFKKEIYLMASKAVELEDKFIDLAYEIGTIEG 338

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118
           L A   ++Y++ I +RR +Q+GL  ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 339 LKADEVKEYIRHITDRRLNQLGLNEIYNIDKNPLTWLEWILNGADHTNFFENRVTEYEVA 398

Query: 119 GAELKWD 125
           G    WD
Sbjct: 399 GLTGNWD 405


>gi|148705043|gb|EDL36990.1| ribonucleotide reductase M2 [Mus musculus]
          Length = 411

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ R ++  A  +E  +  E +P   +G+N
Sbjct: 286 RDEGLHCDFACLMFK-------HLVHKPAEQRVREIITNAVRIEQEFLTEALPVKLIGMN 338

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 339 CTLMKQYIEFVADRLMLELGFNKIFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 393


>gi|6525234|gb|AAF15363.1|AF205376_1 ribonucleotide reductase R2 subunit [Plasmodium falciparum]
          Length = 320

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +  + P       +Q  + ++ EA  +E ++  E++P   +G+N
Sbjct: 195 RDEGLHTDFNCLIYSLLDNKLP-------EQMVQNIVKEAVEVERSFICESLPCDLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G   +F +++NPF WM ++I L+ + NFFE RV +YQ+  
Sbjct: 248 SRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWM-DLISLQGKTNFFEKRVADYQKSG 304


>gi|73974198|ref|XP_539109.2| PREDICTED: similar to ribonucleotide reductase M2 B (TP53
           inducible) isoform 2 [Canis familiaris]
          Length = 351

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++  A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+ A
Sbjct: 279 CVLMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVAEYQRFA 335


>gi|167627842|ref|YP_001678342.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597843|gb|ABZ87841.1| Ribonucleoside-diphosphate reductase [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
          Length = 410

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDES+H+     +      ENP++   +F+++   M  +A  LE  +       G + G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNQFKKEIYLMASKAVELEDKFIDLAYEIGTIEG 338

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118
           L A   ++Y++ I +RR +Q+GL  ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 339 LKADEVKEYIRHITDRRLNQLGLNEIYNIDKNPLTWLEWILNGADHTNFFENRVTEYEVA 398

Query: 119 GAELKWD 125
           G    WD
Sbjct: 399 GLTGNWD 405


>gi|302409182|ref|XP_003002425.1| ribonucleoside-diphosphate reductase small chain [Verticillium
           albo-atrum VaMs.102]
 gi|261358458|gb|EEY20886.1| ribonucleoside-diphosphate reductase small chain [Verticillium
           albo-atrum VaMs.102]
          Length = 414

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q  + ++ +A  +E  +  E +P G +G+N
Sbjct: 276 RDEGLHTDFACLLFS-------HLNNRPSKQTVQDIVTDAVNIEQEFLTEALPCGLLGMN 328

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A   +QY++F+A+R    +G E ++K T NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 329 ATLMKQYIEFVADRLLVALGNEKVYKAT-NPFDFM-ENISLGGKTNFFEKRVADYQKAG 385


>gi|124808087|ref|XP_001348226.1| ribonucleotide reductase small subunit [Plasmodium falciparum 3D7]
 gi|23497116|gb|AAN36665.1|AE014816_50 ribonucleotide reductase small subunit [Plasmodium falciparum 3D7]
          Length = 349

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +  + P       +Q  + ++ EA  +E ++  E++P   +G+N
Sbjct: 224 RDEGLHTDFNCLIYSLLDNKLP-------EQMVQNIVKEAVEVERSFICESLPCDLIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G   +F +++NPF WM ++I L+ + NFFE RV +YQ+  
Sbjct: 277 SRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWM-DLISLQGKTNFFEKRVADYQKSG 333


>gi|301774462|ref|XP_002922647.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           [Ailuropoda melanoleuca]
          Length = 387

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++  A  +E  +  E +P G +G+N
Sbjct: 262 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 314

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+ A
Sbjct: 315 CVLMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVAEYQRFA 371


>gi|301772278|ref|XP_002921557.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Ailuropoda melanoleuca]
          Length = 393

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ R ++  A  +E  +  E +P   +G+N
Sbjct: 268 RDEGLHCDFACLMFK-------HLVHKPSEQRVREIIINAVRIEQEFLTEALPVKLIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 321 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 375


>gi|45360749|ref|NP_989048.1| ribonucleotide reductase M2, gene 1 [Xenopus (Silurana) tropicalis]
 gi|38174078|gb|AAH61353.1| ribonucleotide reductase M2 polypeptide [Xenopus (Silurana)
           tropicalis]
          Length = 378

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 68/117 (58%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  K  +Q+ R ++ +A  +E  +  E +P   +G+N
Sbjct: 253 RDEGLHTDFACLLFK-------HVVHKPSEQRVREIIIDAVKIEQEFLTEALPVELIGMN 305

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G + +FK +ENPF +M E I L+ + NFFE +V EYQ+
Sbjct: 306 CKLMKQYIEFVADRLLLELGFKKIFK-SENPFDFM-ENISLEGKTNFFEKKVAEYQK 360


>gi|194474072|ref|NP_001124015.1| ribonucleoside-diphosphate reductase subunit M2 B [Rattus
           norvegicus]
 gi|149066498|gb|EDM16371.1| ribonucleotide reductase M2 B (TP53 inducible) (predicted) [Rattus
           norvegicus]
          Length = 351

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++   ++ +A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVMEIIVDAVKIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CVLMKQYIEFVADRLLGELGFSKIFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335


>gi|293343290|ref|XP_002725449.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like [Rattus
           norvegicus]
 gi|293355176|ref|XP_002728627.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Rattus
           norvegicus]
          Length = 390

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIITNAVRIEQEFLTEALPVKLIGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +FK  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIFK-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 372


>gi|227485717|ref|ZP_03916033.1| ribonucleoside-diphosphate reductase [Anaerococcus lactolyticus
           ATCC 51172]
 gi|227236272|gb|EEI86287.1| ribonucleoside-diphosphate reductase [Anaerococcus lactolyticus
           ATCC 51172]
          Length = 352

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +IN +K E P L+T E     R ML E    EI +    +     GL+
Sbjct: 224 RDENTHLWLFRSLINDLKKERPDLFTPEATIVYRDMLKEGVRQEIEWGKYAIGDNIAGLS 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y++++ N R   +G +PLF+ YTE P    W+ E  D  + K +FFE +VT Y 
Sbjct: 284 TTMIEDYIKYLGNLRAKGLGFDPLFEGYTEIPQSMKWVDEYSDPNRVKTDFFEAKVTAYS 343

Query: 118 QGAELKWD 125
           + + ++ D
Sbjct: 344 KSSIIEDD 351


>gi|224438210|ref|ZP_03659145.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           cinaedi CCUG 18818]
 gi|313144656|ref|ZP_07806849.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           cinaedi CCUG 18818]
 gi|313129687|gb|EFR47304.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           cinaedi CCUG 18818]
          Length = 348

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL     +IN ++ E PHL+T   +++   M  +A  +E  +         +GL 
Sbjct: 224 RDEVTHLLVFQQMINALRKEQPHLFTPSLEEEVIAMFQKAVEIESVWGEYITQGQILGLT 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           A    +Y+Q++A+ R   +GL  ++ +++NP  W+ +      +K NFFE +VT Y +G+
Sbjct: 284 AEIIREYIQYLADMRLRAVGLREIY-HSKNPIKWVEQFASFNDQKTNFFEAKVTNYSKGS 342


>gi|330998673|ref|ZP_08322403.1| ribonucleoside-diphosphate reductase, beta subunit [Parasutterella
           excrementihominis YIT 11859]
 gi|329576534|gb|EGG58042.1| ribonucleoside-diphosphate reductase, beta subunit [Parasutterella
           excrementihominis YIT 11859]
          Length = 327

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 8/125 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55
           + DE+LH    I +  +  IENP LWT   +++    +  M+  E   +++A+    M K
Sbjct: 191 INDETLHTESMIRLFREYIIENPELWTDSLKKRIYDIAEKMIELEDAFIDLAFGVNDMSK 250

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
               L+    + Y+++I +RR   +G++ +FK   NP PW+  ++ +    NFFE RV +
Sbjct: 251 Q--NLSPADVKAYIRWICDRRLAAMGMKEIFKVNVNPLPWVDSMLGV-THTNFFENRVVD 307

Query: 116 YQQGA 120
           Y +GA
Sbjct: 308 YAKGA 312


>gi|321263951|ref|XP_003196693.1| ribonucleotide reductase small subunit [Cryptococcus gattii WM276]
 gi|317463170|gb|ADV24906.1| Ribonucleotide reductase small subunit, putative [Cryptococcus
           gattii WM276]
          Length = 430

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 9/118 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + N +K       T E  +    ++ EA ++E  +  + +P   +G+N
Sbjct: 294 RDEGMHTDFACLLYNHLK---HRCSTDEVHR----IVSEALVIEKQFLTDALPCALIGIN 346

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           A    QYM+F+A+R    +G   ++  T NPF WM E+I L+ + NFFE+RV+ YQ+ 
Sbjct: 347 AHLMCQYMEFVADRLVVDLGYPKIYNAT-NPFDWM-ELISLQGKANFFESRVSAYQKA 402


>gi|242095388|ref|XP_002438184.1| hypothetical protein SORBIDRAFT_10g009290 [Sorghum bicolor]
 gi|241916407|gb|EER89551.1| hypothetical protein SORBIDRAFT_10g009290 [Sorghum bicolor]
          Length = 339

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   ++       +K  + + R ++ +A  +E  +  + +P   VG+N
Sbjct: 209 RDEGLHCDFACLLYELLR-------SKLDEARVREIVADAVDIEREFVCDALPVALVGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G + ++  T NPF WM E+I L+ + NFFE RV +YQ+ +
Sbjct: 262 GGLMSQYIEFVADRLLMALGCKKMYNAT-NPFDWM-ELISLQGKTNFFEKRVGDYQKAS 318


>gi|303258316|ref|ZP_07344319.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderiales
           bacterium 1_1_47]
 gi|302858762|gb|EFL81850.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderiales
           bacterium 1_1_47]
          Length = 328

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 8/125 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55
           + DE+LH    I +  +  IENP LWT   +++    +  M+  E   +++A+    M K
Sbjct: 192 INDETLHTESMIRLFREYIIENPELWTDSLKKRIYDIAEKMIELEDAFIDLAFGVNDMSK 251

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
               L+    + Y+++I +RR   +G++ +FK   NP PW+  ++ +    NFFE RV +
Sbjct: 252 Q--NLSPADVKAYIRWICDRRLAAMGMKEIFKVNVNPLPWVDSMLGV-THTNFFENRVVD 308

Query: 116 YQQGA 120
           Y +GA
Sbjct: 309 YAKGA 313


>gi|310831442|ref|YP_003970085.1| putative ribonucleoside-diphosphate reductase small subunit
           [Cafeteria roenbergensis virus BV-PW1]
 gi|309386626|gb|ADO67486.1| putative ribonucleoside-diphosphate reductase small subunit
           [Cafeteria roenbergensis virus BV-PW1]
          Length = 326

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 9/118 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H ++ I + + ++        K  Q+K + M  +A   E  +  E++P   +G+N
Sbjct: 201 RDEGMHCDYSIMLYHMLQ-------NKLSQEKIQQMFKDAVETERIFICESLPCSLLGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           A   EQY++F+A++   ++G   +FK  +NPF WM E I ++ + NFFE R T+YQ+ 
Sbjct: 254 ADLMEQYIKFVADQLIIKLGYNKIFK-VDNPFTWM-EAISIEGKTNFFEHRPTQYQRA 309


>gi|149637725|ref|XP_001508783.1| PREDICTED: similar to Ribonucleotide reductase M2 B (TP53
           inducible) [Ornithorhynchus anatinus]
          Length = 401

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 71/119 (59%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   ++ Q  ++ P       + K + ++ +A  +E  +  E +P G +G+N
Sbjct: 276 RDEGLHCDFAC-LMFQYLVKKPS------EDKVKEIIIDAVEIEQEFLTEALPVGLIGMN 328

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F +++NPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 329 CTLMKQYIEFVADRLLVELGFSKVF-HSDNPFDFM-ENISLEGKTNFFEKRVSEYQRFA 385


>gi|313675915|ref|YP_004053911.1| ribonucleoside-diphosphate reductase [Marivirga tractuosa DSM 4126]
 gi|312942613|gb|ADR21803.1| Ribonucleoside-diphosphate reductase [Marivirga tractuosa DSM 4126]
          Length = 331

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 69/122 (56%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + N HL  K  ++K   ++ +A  +E  +  +++P   +G+N
Sbjct: 202 RDEGLHCDFAC------LLYNDHLVNKLSKEKVTAIITDAVEIEKEFVTDSLPVKLIGMN 255

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R   ++  + ++  + NPF +M E+I L+ + NFFE RV +YQ+   
Sbjct: 256 ADLMCQYIEFVADRLLQELRCDKVYG-SSNPFDFM-EMISLQGKTNFFEKRVGDYQKAGV 313

Query: 122 LK 123
           +K
Sbjct: 314 MK 315


>gi|294950175|ref|XP_002786498.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239900790|gb|EER18294.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 350

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 67/119 (56%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N +K      +T+   ++   ++  A  +E  +  E++P   +G+N
Sbjct: 208 RDEGLHADFACLLYNMLK------YTRLPDERVHEIVRGAVEVERVFISESLPVSLIGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    +Y++F+A+R    +G   L+  T NPF WM ++I L+ + NFFE RV EYQ+G 
Sbjct: 262 SQLMCRYIEFVADRLLVALGHPKLYNAT-NPFDWM-KMISLQGKTNFFEKRVGEYQKGG 318


>gi|224048725|ref|XP_002196356.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Taeniopygia
           guttata]
          Length = 390

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ + ++  A L+E  +  E +P   +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLIHKPSEERVKEIIMNAVLIEQEFLTEALPVKLIGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQR 372


>gi|1710398|sp|P50650|RIR2_PLAF4 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase R2 subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|555613|gb|AAA50170.1| ribonucleotide reductase small subunit [Plasmodium falciparum]
          Length = 349

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +  + P       +Q  + ++ EA  +E ++  E++P   +G+N
Sbjct: 224 RDEGLHTDFNCLIYSLLDNKLP-------EQIIQNIVKEAVEVERSFICESLPCDLIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G   +F +++NPF WM ++I L+ + NFFE RV +YQ+  
Sbjct: 277 SRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWM-DLISLQGKTNFFEKRVADYQKSG 333


>gi|148232385|ref|NP_001085389.1| ribonucleotide reductase M2, gene 1 [Xenopus laevis]
 gi|48735122|gb|AAH72071.1| MGC78958 protein [Xenopus laevis]
          Length = 406

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 68/117 (58%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  K  +Q+ R ++ +A  +E  +  E +P   +G+N
Sbjct: 281 RDEGLHTDFACLLFK-------HVVHKPSEQRVREIIIDAVKIEQEFLTEALPVELIGMN 333

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G + +FK +ENPF +M E I L+ + NFFE +V EYQ+
Sbjct: 334 CTLMKQYIEFVADRLLLELGFKKIFK-SENPFDFM-ENISLEGKTNFFEKKVGEYQK 388


>gi|325478871|gb|EGC81981.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           prevotii ACS-065-V-Col13]
          Length = 352

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +IN ++ E   L+TKE ++  R ML E    EIA+    +     GL+
Sbjct: 224 RDENTHLWLFRSLINDLRKEREDLFTKEHKEYYRNMLKEGVEQEIAWGKYAIGDNIAGLS 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y++++ N R   +GLE L++ YTE P    W+ E  D    K +FFE +VT Y 
Sbjct: 284 EKMIEDYIKYLGNLRAKGLGLEALYEGYTEIPDSMKWVDEYSDPNAVKTDFFEAKVTAYS 343

Query: 118 QGA 120
           + +
Sbjct: 344 KSS 346


>gi|327261311|ref|XP_003215474.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           isoform 2 [Anolis carolinensis]
          Length = 390

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPSEERVREIITNAVRIEQEFLTEALPVNLIGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 318 CTLMKQYIEFVADRLILELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQR 372


>gi|76630263|ref|XP_880783.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 3 [Bos
           taurus]
 gi|297480612|ref|XP_002691528.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 2 [Bos
           taurus]
 gi|296482362|gb|DAA24477.1| ribonucleotide reductase M2 polypeptide isoform 2 [Bos taurus]
          Length = 341

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 216 RDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMN 268

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 269 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 323


>gi|2500209|sp|Q60561|RIR2_MESAU RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|49650|emb|CAA48232.1| ribonucleotide reductase [Mesocricetus auratus]
          Length = 386

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPSEQRVQEIITNAVRIEQEFLTEALPVKLIGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +FK  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIFK-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 372


>gi|297805560|ref|XP_002870664.1| ribonucleoside-diphosphate reductase [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316500|gb|EFH46923.1| ribonucleoside-diphosphate reductase [Arabidopsis lyrata subsp.
           lyrata]
          Length = 333

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++       TK  +++ ++++ +A  +E  +  + +P   VG+N
Sbjct: 201 RDEGLHCDFACLIYSLLR-------TKLDEERLKSIVCDAVEIEREFVCDALPCALVGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G   ++  + NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 254 RELMSQYIEFVADRLLTALGCGKVYGVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKAS 310


>gi|327261309|ref|XP_003215473.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           isoform 1 [Anolis carolinensis]
          Length = 394

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 269 RDEGLHCDFACLMFK-------HLVHKPSEERVREIITNAVRIEQEFLTEALPVNLIGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 322 CTLMKQYIEFVADRLILELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQR 376


>gi|70936723|ref|XP_739266.1| ribonucleotide reductase small subunit [Plasmodium chabaudi
           chabaudi]
 gi|56516136|emb|CAH80811.1| ribonucleotide reductase small subunit, putative [Plasmodium
           chabaudi chabaudi]
          Length = 349

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 70/119 (58%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P       ++  + ++ EA  +E ++  E++P   +G+N
Sbjct: 224 RDEGLHTDFNCLIYSLLENKLP-------EEVVQNIVKEAVEVERSFICESLPCDLIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G   +F +++NPF WM ++I L+ + NFFE RV +YQ+  
Sbjct: 277 SRLMSQYIEFVADRLLECLGCSKVF-HSKNPFSWM-DLISLQGKTNFFEKRVADYQKSG 333


>gi|257456224|ref|ZP_05621421.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           vincentii ATCC 35580]
 gi|257446310|gb|EEV21356.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           vincentii ATCC 35580]
          Length = 351

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 68/128 (53%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I++++ E P L+T E  +  R+M+ E    EIA+ H  +     GL 
Sbjct: 223 RDENTHLWLFRSIIHELQKEEPQLFTPENNELFRSMIREGCEQEIAWGHYVIGDDIPGLT 282

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y+Q++ N RC  +G EPL++ + E P    W+S+  +    K +FFE + T Y 
Sbjct: 283 RGMVTDYIQYLGNLRCENLGFEPLYEGHREEPASMSWVSQYSNANLIKTDFFEAKSTAYA 342

Query: 118 QGAELKWD 125
           + + LK D
Sbjct: 343 KSSALKDD 350


>gi|88682973|gb|AAI05512.1| RRM2 protein [Bos taurus]
          Length = 338

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 213 RDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMN 265

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 266 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 320


>gi|327261313|ref|XP_003215475.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           isoform 3 [Anolis carolinensis]
          Length = 391

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 266 RDEGLHCDFACLMFK-------HLVHKPSEERVREIITNAVRIEQEFLTEALPVNLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 319 CTLMKQYIEFVADRLILELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQR 373


>gi|302833193|ref|XP_002948160.1| hypothetical protein VOLCADRAFT_101784 [Volvox carteri f.
           nagariensis]
 gi|300266380|gb|EFJ50567.1| hypothetical protein VOLCADRAFT_101784 [Volvox carteri f.
           nagariensis]
          Length = 354

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 9/124 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  +  +++   ++ EA  LE  +  E +    +G+N
Sbjct: 219 RDEGLHCDFACCLYG-------HLKNRLSRERVVKIVDEAVRLEDEFCTEALSCELLGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G +  +  T NPF WM E+I L+ + NFFE RV EYQ+   
Sbjct: 272 ADLMRQYIRFVADRLLVSLGYDKYYN-TVNPFDWM-EMISLQGKANFFERRVGEYQRACV 329

Query: 122 LKWD 125
           +  D
Sbjct: 330 MAGD 333


>gi|326386063|ref|ZP_08207687.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326209288|gb|EGD60081.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 351

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDE+LH   GI  + Q  ++     TK  ++       +   LE A+      +G V G
Sbjct: 189 VRDETLHCE-GITRLFQAFVQERDCMTKAVREDIIDCCQKTVRLEDAFIDLAFEQGPVPG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           ++A   ++Y+++IA+ R  Q+G +P++   E+P PW++ +++  +  NFFETR TEY + 
Sbjct: 248 MSAKEIKRYIRYIADWRLGQLGFQPIYMIEEHPLPWLTPLLNGVEHANFFETRATEYSKA 307

Query: 120 A 120
           A
Sbjct: 308 A 308


>gi|198420293|ref|XP_002130242.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase subunit
           M2 (Ribonucleotide reductase small subunit)
           (Ribonucleotide reductase small chain) [Ciona
           intestinalis]
          Length = 393

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  + +   ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHCDFACLMFK-------HLLHKPSEARVVEIVKDAVTIEQEFLTDALPVALIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +FK  ENPF +M E+I L+ + NFFE RV EYQ+  
Sbjct: 321 NKLMKQYIEFVADRLLVELGCSKVFK-VENPFDFM-ELISLEGKTNFFEKRVGEYQKAG 377


>gi|160881347|ref|YP_001560315.1| ribonucleoside-diphosphate reductase [Clostridium phytofermentans
           ISDg]
 gi|160430013|gb|ABX43576.1| Ribonucleoside-diphosphate reductase [Clostridium phytofermentans
           ISDg]
          Length = 342

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 70/126 (55%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    +++ ++++E   ++TK  +++ R M+      EIA+         +G+N
Sbjct: 214 RDEITHLVLFQNIMKELRVEQKEMFTKGLEEELREMMRTGVEHEIAWGQYVTDNQILGIN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               +QY+++++N+R   +GLE L+ + T++P  W+    ++   K +FFE +VT Y + 
Sbjct: 274 NELIDQYIKYLSNQRLRAVGLEILYPEITKHPMEWIESFSNINSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AVFDFD 339


>gi|20809684|gb|AAH28932.1| Similar to ribonucleotide reductase protein r2 class I [Homo
           sapiens]
          Length = 172

 Score = 70.1 bits (170), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 47  RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 99

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 100 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 154


>gi|58260834|ref|XP_567827.1| ribonucleotide reductase small subunit [Cryptococcus neoformans
           var. neoformans JEC21]
 gi|134117207|ref|XP_772830.1| hypothetical protein CNBK2010 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255448|gb|EAL18183.1| hypothetical protein CNBK2010 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229908|gb|AAW46310.1| ribonucleotide reductase small subunit, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 430

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 9/118 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + N +K       T E       ++ EA ++E  +  + +P   +G+N
Sbjct: 294 RDEGMHTDFACLLYNHLK---HRCSTDEVHH----IVSEALVIEKQFLTDALPCALIGIN 346

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           A    QYM+F+A+R    +G   ++  T NPF WM E+I L+ + NFFE+RV+ YQ+ 
Sbjct: 347 AHLMCQYMEFVADRLVVDLGYPKIYNAT-NPFDWM-ELISLQGKANFFESRVSAYQKA 402


>gi|242076364|ref|XP_002448118.1| hypothetical protein SORBIDRAFT_06g021460 [Sorghum bicolor]
 gi|241939301|gb|EES12446.1| hypothetical protein SORBIDRAFT_06g021460 [Sorghum bicolor]
          Length = 339

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  + + R ++ +A  +E  +  + +P   VG+N
Sbjct: 209 RDEGLHCDFACLLYDLLR-------GKLDESRVREIVADAVDIEREFVCDALPVALVGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G + ++    NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 262 GALMSQYIEFVADRLLMALGHKKMYN-VANPFDWM-ELISLQGKTNFFEKRVGEYQKAS 318


>gi|125554800|gb|EAZ00406.1| hypothetical protein OsI_22421 [Oryza sativa Indica Group]
          Length = 244

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  + + R ++ +A  +E  +  + +P   VG+N
Sbjct: 114 RDEGLHCDFACLLYDLLR-------GKLDEARVREIVADAVDIEREFVCDALPVALVGMN 166

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G + ++    NPF WM E+I L+ + NFFE RV +YQ+ +
Sbjct: 167 GDLMSQYIEFVADRLLMALGCKKMYN-VANPFDWM-ELISLQGKTNFFEKRVGDYQKAS 223


>gi|255536887|ref|XP_002509510.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis]
 gi|223549409|gb|EEF50897.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis]
          Length = 329

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 200 RDEGLHCDFACLIYSLLK-------KKLSEERVKGIVRDAVNIEREFVCDALPCALVGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G    +  + NPF WM E+I L+ + NFFE RV EYQ+ A
Sbjct: 253 GELMSQYIEFVADRLLGALGCGKEYNVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKAA 309


>gi|296421312|ref|XP_002840209.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636423|emb|CAZ84400.1| unnamed protein product [Tuber melanosporum]
          Length = 397

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N       HL  +  QQ  + ++ EA  +E  +  E +P   +G+N
Sbjct: 262 RDEGLHTDFACLLFN-------HLNNRPSQQAVQDIIVEAVGIEQEFLTEALPCALLGMN 314

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +   +QY++F+A+R    +G  P F    NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 315 SKLMKQYIEFVADRLLLSLG-NPKFYNATNPFDFM-ESISLAGKTNFFEKRVGDYQKAG 371


>gi|224055741|ref|XP_002298630.1| predicted protein [Populus trichocarpa]
 gi|222845888|gb|EEE83435.1| predicted protein [Populus trichocarpa]
          Length = 329

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ EA  +E  +  +++P   VG+N
Sbjct: 200 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKEAVDIEREFVVDSLPCALVGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 253 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFFEKRVGEYQKAS 309


>gi|126322530|ref|XP_001380256.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 361

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 71/119 (59%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       +L  K  +++ + ++  A  +E  +  + +P G +G+N
Sbjct: 236 RDEGLHCDFACLMFH-------YLVNKPSEERVKEIIINAVEIEQEFLTDALPVGLIGIN 288

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +   +QY++F+A+R   ++G   +F+ ++NPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 289 STLMKQYIEFVADRLLVELGFSKVFQ-SDNPFDFM-ENISLEGKTNFFEKRVSEYQRFA 345


>gi|77748199|gb|AAI06683.1| MGC78958 protein [Xenopus laevis]
          Length = 406

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 68/117 (58%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  K  +Q+ R ++ +A  +E  +  E +P   +G+N
Sbjct: 281 RDEGLHTDFACLLFK-------HVVHKPSEQRVREIIIDAVKIEQEFLIEALPVELIGMN 333

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G + +FK +ENPF +M E I L+ + NFFE +V EYQ+
Sbjct: 334 CTLMKQYIEFVADRLLLELGFKKIFK-SENPFDFM-ENISLEGKTNFFEKKVGEYQK 388


>gi|76630259|ref|XP_584910.2| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos
           taurus]
 gi|297480610|ref|XP_002691527.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos
           taurus]
 gi|296482361|gb|DAA24476.1| ribonucleotide reductase M2 polypeptide isoform 1 [Bos taurus]
          Length = 389

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 264 RDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMN 316

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 317 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 371


>gi|75224904|sp|Q6Y657|RIR2B_ARATH RecName: Full=Putative ribonucleoside-diphosphate reductase small
           chain B; AltName: Full=Ribonucleoside-diphosphate
           reductase R2B subunit; AltName: Full=Ribonucleotide
           reductase small subunit B
 gi|37729626|gb|AAO62422.1| ribonucleotide reductase small subunit [Arabidopsis thaliana]
          Length = 333

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++       TK  + + + ++ +A  +E  +  + +P   VG+N
Sbjct: 201 RDEGLHCDFACLIYSLLR-------TKLDEDRLKAIVCDAVEIEREFVCDALPCALVGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G   ++  + NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 254 RELMSQYIEFVADRLLAALGCAKVYGVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKAS 310


>gi|225010999|ref|ZP_03701465.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
           MS024-3C]
 gi|225004906|gb|EEG42862.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
           MS024-3C]
          Length = 328

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 69/124 (55%), Gaps = 8/124 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H ++ +       + N HL  K  + + R +L +A  +E  +  E++P   +G+N
Sbjct: 199 RDEGMHCDYAV------HLHNHHLINKVPKARIREILVDALNIERTFITESLPASLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+ +R   ++  E  +  + NPF +M ++I L+ + NFFE RV+EYQ+   
Sbjct: 253 AKLMTQYLEFVTDRLLVELQCEKEYNVS-NPFDFM-DMISLQGKTNFFEKRVSEYQKAGV 310

Query: 122 LKWD 125
           L  D
Sbjct: 311 LNKD 314


>gi|218289144|ref|ZP_03493380.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218240727|gb|EED07906.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 345

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++ ++I  ENP + T + +++   M+  A   EIA+         VGL 
Sbjct: 218 RDELTHLAIFRNLYHEIVRENPGIVTPDMEEEFVEMMRTAVQHEIAWGQYVTQGKIVGLT 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               + Y++++AN R   + L  L+ +  E+P PWM     +   K +FFE RVT Y + 
Sbjct: 278 DALIDAYIKYLANLRLQSLNLPILYPEIKEHPMPWMDSFAAINSHKTDFFEQRVTNYTKA 337

Query: 120 AELKWD 125
             L WD
Sbjct: 338 GNLNWD 343


>gi|156847978|ref|XP_001646872.1| hypothetical protein Kpol_2002p85 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117553|gb|EDO19014.1| hypothetical protein Kpol_2002p85 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 400

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 67/120 (55%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE LH +F   + + IK + +P +  K        ++ EA  +E  Y  + +P   +G+
Sbjct: 270 RDEGLHTDFACLLFSHIKNKPDPAIVEK--------IVTEAVEIEKRYFTDALPVALLGM 321

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    QY++F+A+R     G E +FK  ENPF +M E I L  + NFFE RV++YQ+ +
Sbjct: 322 NADLMNQYVEFVADRLLVAFGNEKVFK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAS 379


>gi|68069763|ref|XP_676793.1| ribonucleotide reductase small subunit [Plasmodium berghei strain
           ANKA]
 gi|56496646|emb|CAI04349.1| ribonucleotide reductase small subunit, putative [Plasmodium
           berghei]
          Length = 158

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 70/119 (58%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P       ++  + ++ EA  +E ++  E++P   +G+N
Sbjct: 33  RDEGLHTDFNCLIYSLLENKLP-------EEVVQNIVKEAVEVERSFICESLPCDLIGMN 85

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G   +F +++NPF WM ++I L+ + NFFE RV +YQ+  
Sbjct: 86  SRLMSQYIEFVADRLLECLGCSKVF-HSKNPFNWM-DLISLQGKTNFFEKRVADYQKSG 142


>gi|193784694|dbj|BAG53847.1| unnamed protein product [Homo sapiens]
 gi|193787382|dbj|BAG52588.1| unnamed protein product [Homo sapiens]
          Length = 297

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 172 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 224

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 225 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 279


>gi|89890041|ref|ZP_01201552.1| ribonucleoside-diphosphate reductase small chain [Flavobacteria
           bacterium BBFL7]
 gi|89518314|gb|EAS20970.1| ribonucleoside-diphosphate reductase small chain [Flavobacteria
           bacterium BBFL7]
          Length = 330

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F +       + N HL  K  +++   ++ +A  +E  +  E++P   +G+N
Sbjct: 199 RDEGMHCDFAV------HLHNHHLVNKVPKERITEIIVDALNIEREFITESLPASLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+ +R   ++  +P++  T NPF +M ++I ++ + NFFE RV EYQ+  
Sbjct: 253 AKLMTQYLEFVTDRLLGELECDPVYNVT-NPFDFM-DLIGMEGKTNFFEKRVGEYQKAG 309


>gi|227541|prf||1706181A ribonucleotide reductase
          Length = 290

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 165 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 217

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 218 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 272


>gi|71043760|ref|NP_001020911.1| ribonucleoside-diphosphate reductase subunit M2 [Rattus norvegicus]
 gi|77416595|sp|Q4KLN6|RIR2_RAT RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|68533806|gb|AAH99082.1| Ribonucleotide reductase M2 [Rattus norvegicus]
 gi|149051013|gb|EDM03186.1| rCG61374 [Rattus norvegicus]
          Length = 390

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  +  +E  +  E +P   +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIITNSVRIEQEFLTEALPVKLIGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +FK  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIFK-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 372


>gi|52077136|dbj|BAD46182.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
 gi|52077275|dbj|BAD46317.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
 gi|186920364|gb|ACC95435.1| ribonucleotide diphosphate reductase small subunit 1 [Oryza sativa
           Japonica Group]
          Length = 339

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  + + R ++ +A  +E  +  + +P   VG+N
Sbjct: 209 RDEGLHCDFACLLYDLLR-------GKLDEARVREIVADAVDIEREFVCDALPVALVGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G + ++    NPF WM E+I L+ + NFFE RV +YQ+ +
Sbjct: 262 GDLMSQYIEFVADRLLMALGCKKMYN-VANPFDWM-ELISLQGKTNFFEKRVGDYQKAS 318


>gi|258511567|ref|YP_003185001.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478293|gb|ACV58612.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 369

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++ ++I  ENP + T + +++   M+  A   EIA+         VGL 
Sbjct: 242 RDELTHLAIFRNLYHEIIRENPGIVTPDMEEEFVEMMRTAVQHEIAWGQYVTQGKIVGLT 301

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               + Y++++AN R   + L  L+ +  E+P PWM     +   K +FFE RVT Y + 
Sbjct: 302 DALIDAYIKYLANLRLQSLNLPILYPEIKEHPMPWMDSFAAINSHKTDFFEQRVTNYTKA 361

Query: 120 AELKWD 125
             L WD
Sbjct: 362 GNLNWD 367


>gi|226528734|ref|NP_001150842.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
 gi|195642302|gb|ACG40619.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
          Length = 339

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   ++        K  + + R ++ +A  +E  +  + +P   VG+N
Sbjct: 209 RDEGLHCDFACLLYELLR-------NKLDEARVREIVADAVDIEREFVCDALPVALVGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G + ++  T NPF WM E+I L  + NFFE RV +YQ+ +
Sbjct: 262 GDLMSQYIEFVADRLLMALGCKKMYNVT-NPFDWM-ELISLMGKTNFFEKRVGDYQKAS 318


>gi|301166951|emb|CBW26530.1| putative ribonucleoside-diphosphate reductase small chain subunit
           [Bacteriovorax marinus SJ]
          Length = 322

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 13/124 (10%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTM---LHEATLLEIAYAHETMPKGFV 58
           RDE LH  F   +          L T E Q    T+   + EA  +E  +  E +P   +
Sbjct: 195 RDEGLHCEFACHI--------HELLTPEEQLNKETITQIITEAVSIEKEFITEAIPVSLI 246

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           G+NA    +Y++F+A+   +++G E  +  TENPF WM E+I L+ + NFFE RV+EYQ+
Sbjct: 247 GMNADMMSRYIEFVADYWLNRLGCEKAYN-TENPFDWM-ELISLEGKTNFFEKRVSEYQK 304

Query: 119 GAEL 122
              L
Sbjct: 305 PGVL 308


>gi|145580571|pdb|2UW2|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase
           Subunit R2
          Length = 332

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 207 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 259

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 260 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 314


>gi|9634266|ref|NP_037805.1| ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera
           exigua MNPV]
 gi|6960505|gb|AAF33575.1|AF169823_45 ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera
           exigua MNPV]
          Length = 313

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 14/120 (11%)

Query: 2   RDESLHLNFGIDVIN---QIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
           RDE LH NF     N     K++ P +           M  EA  +E+ +  E +P+  V
Sbjct: 191 RDEGLHTNFACLYYNTRVDQKLDAPTV---------NDMFSEAVAIEMEFFAEALPESLV 241

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           G+NA    +Y++F+A+R   Q+   P   YTENPF +M+  I L+ + NFFE RV EY++
Sbjct: 242 GMNANMMRKYIEFVADRLLVQLKY-PKMYYTENPFEFMNN-ISLEGKTNFFEKRVGEYKR 299


>gi|163784572|ref|ZP_02179421.1| ribonucleotide-diphosphate [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880158|gb|EDP73813.1| ribonucleotide-diphosphate [Hydrogenivirga sp. 128-5-R1-1]
          Length = 139

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 3/116 (2%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60
           DESLHL  GI+ I  I  ENP +    +F +  R  + +A  LE+ Y         + G+
Sbjct: 22  DESLHLQNGIEAILTIIEENPEIVDDIKFVENIRDTIIDAVELELNYLKTKFGGTTIFGV 81

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
           +    E YM++IA+RR  ++G +P F   +NP  ++ +  D+KK  NFFE   TEY
Sbjct: 82  SYKELEMYMKYIADRRLEELGFDPQFNIQQNPLKFLQKE-DVKKLTNFFEVSSTEY 136


>gi|73979721|ref|XP_540076.2| PREDICTED: similar to Ribonucleoside-diphosphate reductase M2 chain
           (Ribonucleotide reductase small chain) isoform 1 [Canis
           familiaris]
          Length = 394

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 269 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIIINAVRIEQEFLTEALPVKLIGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 322 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 376


>gi|296271635|ref|YP_003654266.1| ribonucleoside-diphosphate reductase [Arcobacter nitrofigilis DSM
           7299]
 gi|296095810|gb|ADG91760.1| Ribonucleoside-diphosphate reductase [Arcobacter nitrofigilis DSM
           7299]
          Length = 339

 Score = 69.3 bits (168), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN  + E P L+T E + K R M  +A  LE A+         +G  
Sbjct: 215 RDEVTHLLLFQNMINSTRKERPDLFTPELEVKVRAMFRKAVELEAAWGAYITQGQILGFT 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
                QY+Q++A++R   +G +P +   ++P PW+        ++ NFFE  V  Y +G+
Sbjct: 275 DGIITQYIQYLADKRLDAVGYKPEYN-VKHPIPWVDGYSSFNDQRTNFFEGNVVNYSKGS 333


>gi|4557845|ref|NP_001025.1| ribonucleoside-diphosphate reductase subunit M2 isoform 2 [Homo
           sapiens]
 gi|400979|sp|P31350|RIR2_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|36155|emb|CAA42181.1| small subunit ribonucleotide reductase [Homo sapiens]
 gi|251637|gb|AAA09577.1| ribonucleotide reductase R2 subunit [Homo sapiens]
 gi|12804875|gb|AAH01886.1| Ribonucleotide reductase M2 polypeptide [Homo sapiens]
 gi|14029165|gb|AAK51163.1| ribonucleotide reductase M2 subunit [Homo sapiens]
 gi|20988810|gb|AAH30154.1| Ribonucleotide reductase M2 polypeptide [Homo sapiens]
 gi|62702173|gb|AAX93099.1| unknown [Homo sapiens]
 gi|123981920|gb|ABM82789.1| ribonucleotide reductase M2 polypeptide [synthetic construct]
 gi|123996753|gb|ABM85978.1| ribonucleotide reductase M2 polypeptide [synthetic construct]
 gi|189053955|dbj|BAG36462.1| unnamed protein product [Homo sapiens]
 gi|261861600|dbj|BAI47322.1| ribonucleotide reductase M2 [synthetic construct]
          Length = 389

 Score = 69.3 bits (168), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 264 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 316

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 317 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 371


>gi|162147608|ref|YP_001602069.1| ribonucleotide-diphosphate reductase subunit beta
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209542240|ref|YP_002274469.1| ribonucleotide-diphosphate reductase subunit beta
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786185|emb|CAP55767.1| putative ribonucleotide reductase small subunit [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209529917|gb|ACI49854.1| Ribonucleoside-diphosphate reductase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 353

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 1/121 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDE+LH      +      ENP +WT   +     +  +    E A+       G V G
Sbjct: 213 VRDETLHCLSMARLFRVFIQENPEIWTDALRADIVQICRDIVEHEDAFIDLCFEMGPVEG 272

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L+    + Y++FIA+RR + +GL+ ++    NP PW+ ++++  +  NFFE R TEY + 
Sbjct: 273 LDGDLVKTYIRFIADRRLNLLGLDGIYDVPSNPLPWVDDMLNAVEHTNFFENRSTEYSRA 332

Query: 120 A 120
           +
Sbjct: 333 S 333


>gi|149728153|ref|XP_001502384.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase subunit
           M2 (Ribonucleotide reductase small subunit)
           (Ribonucleotide reductase small chain) [Equus caballus]
          Length = 425

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 300 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIIINAVRIEQEFLTEALPVRLIGMN 352

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 353 CALMKQYIEFVADRLLLELGFNKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 407


>gi|212274629|ref|NP_001130908.1| hypothetical protein LOC100192012 [Zea mays]
 gi|195636980|gb|ACG37958.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
          Length = 339

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  + + R ++ +A  +E  +  + +P   VG+N
Sbjct: 209 RDEGLHCDFACLLYDLLR-------GKLDESRVREIVADAVDIEREFVCDALPVALVGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 262 GGLMSQYIEFVADRLLMALGHRKMYN-VANPFDWM-ELISLQGKTNFFEKRVGEYQKAS 318


>gi|103487260|ref|YP_616821.1| ribonucleotide-diphosphate reductase subunit beta [Sphingopyxis
           alaskensis RB2256]
 gi|98977337|gb|ABF53488.1| Ribonucleoside-diphosphate reductase [Sphingopyxis alaskensis
           RB2256]
          Length = 354

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    I + +    E   L TK  ++       +   LE A+      +G V G
Sbjct: 189 IRDESLHCEGIIKLFHAFTKERGCL-TKAVKEDIIDTCQKTVRLEDAFIDLAFEQGPVPG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     ++Y+++IA+ R  Q+G +P++   E+P PW++ +++  +  NFFETR TEY +G
Sbjct: 248 MTPKEIKRYIRYIADWRLGQLGFQPIYMIDEHPLPWLAPLLNGVEHANFFETRATEYSKG 307

Query: 120 A 120
           A
Sbjct: 308 A 308


>gi|260064013|ref|NP_001159403.1| ribonucleoside-diphosphate reductase subunit M2 isoform 1 [Homo
           sapiens]
          Length = 449

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 324 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 376

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 377 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 431


>gi|194690416|gb|ACF79292.1| unknown [Zea mays]
 gi|194704028|gb|ACF86098.1| unknown [Zea mays]
 gi|195619132|gb|ACG31396.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
 gi|223943167|gb|ACN25667.1| unknown [Zea mays]
          Length = 339

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  + + R ++ +A  +E  +  + +P   VG+N
Sbjct: 209 RDEGLHCDFACLLYDLLR-------GKLDESRVREIVADAVDIEREFVCDALPVALVGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EYQ+ + 
Sbjct: 262 GGLMSQYIEFVADRLLMALGHRKMYN-VANPFDWM-ELISLQGKTNFFEKRVGEYQKASV 319

Query: 122 LK 123
           + 
Sbjct: 320 MS 321


>gi|297668213|ref|XP_002812343.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Pongo abelii]
          Length = 449

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 324 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 376

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 377 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 431


>gi|119621373|gb|EAX00968.1| hCG23833, isoform CRA_b [Homo sapiens]
 gi|119621374|gb|EAX00969.1| hCG23833, isoform CRA_b [Homo sapiens]
          Length = 449

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 324 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 376

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 377 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 431


>gi|225451453|ref|XP_002269951.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|147804660|emb|CAN64484.1| hypothetical protein VITISV_012640 [Vitis vinifera]
          Length = 329

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ ++  +E  +  + +P   VG+N
Sbjct: 200 RDEGLHCDFACLLYSLLR-------NKLSEERVKAIVADSVDIEREFVCDALPCALVGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G   ++  + NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 253 SALMSQYIEFVADRLLGALGYGKMYNVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKAS 309


>gi|75076796|sp|Q4R7Q7|RIR2_MACFA RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|67969020|dbj|BAE00865.1| unnamed protein product [Macaca fascicularis]
          Length = 389

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 264 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRVEQEFLTEALPVKLIGMN 316

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 317 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 371


>gi|149408710|ref|XP_001506085.1| PREDICTED: similar to 5,10-methenyltetrahydrofolate synthetase
           [Ornithorhynchus anatinus]
          Length = 394

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ + ++  A  +E  +  E +P   +G+N
Sbjct: 269 RDEGLHCDFACLMFK-------HLVHKPSEERVKEIIINAVRIEQEFLTEALPVKLIGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +FK  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 322 CTLMKQYIEFVADRLLLELGFSKIFK-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 376


>gi|82538850|ref|XP_723858.1| ribonucleotide reductase small chain [Plasmodium yoelii yoelii str.
           17XNL]
 gi|145580416|pdb|2P1I|A Chain A, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580417|pdb|2P1I|B Chain B, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580418|pdb|2P1I|C Chain C, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580419|pdb|2P1I|D Chain D, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580420|pdb|2P1I|E Chain E, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580421|pdb|2P1I|F Chain F, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580422|pdb|2P1I|G Chain G, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580423|pdb|2P1I|H Chain H, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|23478298|gb|EAA15423.1| Ribonucleotide reductase, small chain [Plasmodium yoelii yoelii]
          Length = 349

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P       +   + ++ EA  +E ++  E++P   +G+N
Sbjct: 224 RDEGLHTDFNCLIYSLLENKLP-------ENVVQNIVKEAVEVERSFICESLPCDLIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G   +F +++NPF WM ++I L+ + NFFE RV +YQ+  
Sbjct: 277 SRLMSQYIEFVADRLLECLGCSKVF-HSKNPFNWM-DLISLQGKTNFFEKRVADYQKSG 333


>gi|149721713|ref|XP_001493623.1| PREDICTED: ribonucleotide reductase M2 B (TP53 inducible) [Equus
           caballus]
          Length = 351

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVDLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CVLMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335


>gi|316971821|gb|EFV55552.1| ribonucleotide reductase R2 subunit [Trichinella spiralis]
          Length = 366

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K  + + R ++ EA  +E  +  + +P   +G+N
Sbjct: 241 RDEGLHCDFACLLYS-------HLKKKPTEDRVRQIITEAVSIEQEFLTDALPVRLIGMN 293

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++++A+R   ++G   ++  +ENPF +M E+I L+ + NFFE RV EYQ+  
Sbjct: 294 CVLMSQYIEYVADRLLVELGCSKVYN-SENPFDFM-EMISLEGKTNFFEKRVGEYQKAG 350


>gi|159465291|ref|XP_001690856.1| ribonucleoside-diphosphate reductase small subunit [Chlamydomonas
           reinhardtii]
 gi|158279542|gb|EDP05302.1| ribonucleoside-diphosphate reductase small subunit [Chlamydomonas
           reinhardtii]
          Length = 493

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +++   ++ EA  LE  +  E +    +G+N
Sbjct: 360 RDEGLHCDFACCLYS-------HLKNRLSRERVLQIVDEAVQLEDEFCTEALSCELLGMN 412

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  +  T NPF WM E+I L+ + NFFE RV EYQ+  
Sbjct: 413 ADLMRQYIRFVADRLLVSLGYEKHYN-TRNPFDWM-EMISLQGKANFFERRVGEYQRAG 469


>gi|38232564|gb|AAR15079.1| ribonucleotide reductase R2 subunit variant [Aedes albopictus]
          Length = 219

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  Q++   ++ EA L+E  +  + +P   +G+N
Sbjct: 94  RDEGLHTDFACLMF-------KYLVQKPSQERVIEIIREAVLIEQEFLTKALPVDLLGMN 146

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G++ ++  T+NPF +M E I L+ + NFFE +V EYQ+
Sbjct: 147 CELMSQYIEFVADRLLLELGIDKIYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQK 201


>gi|4894211|gb|AAD32302.1| ribonucleotide reductase small subunit [Glycine max]
          Length = 339

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++   P +       +   ++HEA  +E  +  + +P   +G+N
Sbjct: 210 RDEGLHCDFACLLYSLLR--KPLI-----SDQVHKLVHEAVEIETEFVCDALPCALIGMN 262

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +   ENPF WM E I L+ + NFFE RV +YQ+ +
Sbjct: 263 SVLMSQYIKFVADRLLVALGYQRKYN-VENPFDWM-EFISLQGKANFFERRVGDYQKAS 319


>gi|225320685|dbj|BAH29738.1| ribonucleoside-diphosphate reductase subunit M2 [Dicyema japonicum]
          Length = 337

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K + P       + +   ++ EA +LE  +  E +P   +G+N
Sbjct: 209 RDEGLHTDFACLLYHHLKKKLP-------RDRILQIITEAVVLEKEFLTEALPVALIGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G +  + Y +NPF +M E I L  + NFFE RV EYQ+
Sbjct: 262 VNLMSQYIEFVADRLIIELGYDKHY-YAQNPFDFM-ENISLSGKTNFFEKRVGEYQR 316


>gi|209877302|ref|XP_002140093.1| ribonucleotide-diphosphate reductase, small subunit
           [Cryptosporidium muris RN66]
 gi|209555699|gb|EEA05744.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Cryptosporidium muris RN66]
          Length = 346

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +FG  +   +    P+   +E       ++ EA  +E A+  +++P   +G+N
Sbjct: 221 RDEGIHADFGCLLYKTLNNRLPYGRVQE-------IIAEAVEVERAFLCDSLPVDLIGMN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    + +  ++  T NPF WM ++I L+ + NFFE RV EYQ   
Sbjct: 274 SRLMAQYIEFVADRLLFALDVPKIYNVT-NPFDWM-DLISLQGKTNFFEKRVAEYQMAG 330


>gi|157126966|ref|XP_001654749.1| ribonucleoside-diphosphate reductase small chain [Aedes aegypti]
 gi|15638625|gb|AAL05057.1|AF411297_1 ribonucleotide reductase 2 [Aedes aegypti]
 gi|82469974|gb|ABB77235.1| ribonucleotide reductase small subunit R2 [Aedes aegypti]
 gi|108873070|gb|EAT37295.1| ribonucleoside-diphosphate reductase small chain [Aedes aegypti]
          Length = 397

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  Q++   ++ EA L+E  +  + +P   +G+N
Sbjct: 272 RDEGLHTDFACLMFK-------YLVQKPSQERVIEIIREAVLIEQEFLTKALPVDLLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G++ ++  T+NPF +M E I L+ + NFFE +V EYQ+
Sbjct: 325 CDLMSQYIEFVADRLLLELGIDKIYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQK 379


>gi|291412327|ref|XP_002722439.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Oryctolagus
           cuniculus]
          Length = 400

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 275 RDEGLHCDFACLMFK-------HLVHKPSEQRVQEIIVNAVRIEQEFLTEALPVKLIGMN 327

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 328 CALMKQYIEFVADRLLLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 382


>gi|296082342|emb|CBI21347.3| unnamed protein product [Vitis vinifera]
          Length = 227

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 6/108 (5%)

Query: 17  QIKIENPH----LWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFI 72
           QI IEN H    L  K  +++ + ++ ++  +E  +  + +P   VG+N+    QY++F+
Sbjct: 102 QIAIENIHSEILLRNKLSEERVKAIVADSVDIEREFVCDALPCALVGMNSALMSQYIEFV 161

Query: 73  ANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A+R    +G   ++  + NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 162 ADRLLGALGYGKMYNVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKAS 207


>gi|221060582|ref|XP_002260936.1| ribonucleotide reductase small subunit [Plasmodium knowlesi strain
           H]
 gi|193811010|emb|CAQ42908.1| ribonucleotide reductase small subunit,putative [Plasmodium
           knowlesi strain H]
          Length = 349

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P       ++  + ++ EA  +E ++  E++P   +G+N
Sbjct: 224 RDEGLHTDFNCLIYSLLENKLP-------EEVVQNIVKEAVEVERSFICESLPCDLIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G   +F + +NPF WM ++I L+ + NFFE RV +YQ+  
Sbjct: 277 SRLMSQYIEFVADRLLECLGSRKIF-HAKNPFNWM-DLISLQGKTNFFEKRVADYQKSG 333


>gi|296282225|ref|ZP_06860223.1| ribonucleotide-diphosphate reductase subunit beta [Citromicrobium
           bathyomarinum JL354]
          Length = 354

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 69/123 (56%), Gaps = 6/123 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE---IAYAHETMPKGF 57
           +RDESLH    I + ++  +     +TK  ++    +  ++  LE   I  A E  P   
Sbjct: 189 VRDESLHCEGIIRLFHEF-VRERDCYTKAVKEDIIDICQKSVRLEDNFIDLAFEMGP--V 245

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
            G+ A   ++Y+++IA+ R  Q+GL+P++   E+P PW++ +++  +  NFFE R TEY 
Sbjct: 246 SGMTAKEIKKYIRYIADWRLGQLGLQPIYMIDEHPLPWLTPLLNGVEHANFFEQRATEYS 305

Query: 118 QGA 120
           +GA
Sbjct: 306 KGA 308


>gi|118383611|ref|XP_001024960.1| ribonucleoside-diphosphate reductase, beta subunit family protein
           [Tetrahymena thermophila]
 gi|89306727|gb|EAS04715.1| ribonucleoside-diphosphate reductase, beta subunit family protein
           [Tetrahymena thermophila SB210]
          Length = 376

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 9/118 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +   N  L  +E  +    ++ EA  +E  +  E +P   +G+N
Sbjct: 251 RDEGLHTDFACLLYSML---NKKLTKEEIYE----IITEAVEIEKEFISEALPVELIGMN 303

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +   +QY++F+A+R    +G+ P F  ++NPF WM ++I ++ + NFFE RV EYQ+ 
Sbjct: 304 SNMMKQYLEFVADRLLFALGV-PKFYNSKNPFEWM-DMISIQGKTNFFEKRVGEYQKA 359


>gi|332247270|ref|XP_003272776.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           isoform 2 [Nomascus leucogenys]
 gi|332247272|ref|XP_003272777.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           isoform 3 [Nomascus leucogenys]
          Length = 297

 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 172 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 224

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 225 CILMKQYIEFVADRLMLELGFGKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 279


>gi|260909050|gb|ACX54162.1| RR2 protein [Shrimp white spot syndrome virus]
 gi|260909052|gb|ACX54163.1| RR2 protein [Shrimp white spot syndrome virus]
 gi|260909054|gb|ACX54164.1| RR2 protein [Shrimp white spot syndrome virus]
 gi|260909056|gb|ACX54165.1| RR2 protein [Shrimp white spot syndrome virus]
          Length = 349

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 66/118 (55%), Gaps = 8/118 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   ++ +  ++ P       +++   ++ EA  +E  +   ++P   VG+N
Sbjct: 235 RDEGLHRDFACMLLKKGFVDTPS------RERILEIVTEAVRIEQEFLTVSLPVKLVGMN 288

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A++   ++GLE  +  T NPFP+M   I L+ + NFFE RV EYQ+ 
Sbjct: 289 CKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMDN-ISLENKTNFFEKRVAEYQRA 344


>gi|294945135|ref|XP_002784568.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239897674|gb|EER16364.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 238

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N +       +T+   ++   ++  A  +E  +  E++P   +G+N
Sbjct: 96  RDEGLHADFACLLYNMMH------YTRLPDERVHEIVRGAVDVERVFISESLPVSLIGMN 149

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    +Y++F+A+R    +G   L+  T NPF WM ++I L+ + NFFE RV EYQ+G 
Sbjct: 150 SQLMCRYIEFVADRLLVALGHPKLYNAT-NPFDWM-KMISLQGKTNFFEKRVGEYQKGG 206


>gi|73974202|ref|XP_858105.1| PREDICTED: similar to ribonucleotide reductase M2 B (TP53
           inducible) isoform 4 [Canis familiaris]
          Length = 374

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 73/135 (54%), Gaps = 18/135 (13%)

Query: 2   RDESLHLNFG-------IDVINQIKIENPHLWTKEFQQKSRT--MLHEATLLEIA----- 47
           RDE LH +F        ++  ++ ++    +   E +Q SR   M+  +  LEIA     
Sbjct: 226 RDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQVSREAYMISTSLFLEIATCRSK 285

Query: 48  --YAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE 105
             +  E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ +
Sbjct: 286 HEFLTEALPVGLIGMNCVLMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGK 343

Query: 106 KNFFETRVTEYQQGA 120
            NFFE RV EYQ+ A
Sbjct: 344 TNFFEKRVAEYQRFA 358


>gi|126303832|ref|XP_001381111.1| PREDICTED: similar to hCG23833, [Monodelphis domestica]
          Length = 493

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  ++K + ++  A  +E  +  E +P   +G+N
Sbjct: 368 RDEGLHCDFACLMFK-------HLVHKPSEEKVKEIIINAVRIEQEFLTEALPVKLIGMN 420

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 421 CTLMKQYIEFVADRLMLELGFSKIFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 475


>gi|66822029|ref|XP_644369.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
           AX4]
 gi|66823381|ref|XP_645045.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
           AX4]
 gi|41019487|sp|P42521|RIR2_DICDI RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|29611978|gb|AAB72227.2| ribonucleotide reductase small subunit [Dictyostelium discoideum]
 gi|60472492|gb|EAL70444.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
           AX4]
 gi|60472997|gb|EAL70945.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
           AX4]
          Length = 338

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 67/118 (56%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE LH +F   +  +++ + +P +  K        M+ +A   E  +  E++P   +G+
Sbjct: 206 RDEGLHCDFACLLYTKLQRKLDPKVIEK--------MIRDAVECEKEFICESLPVDLIGM 257

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           N+ S  QY++F A+R    +G + +F  + NPF WM E+I L+++ NFFE +V EY +
Sbjct: 258 NSRSMSQYIEFCADRLVVSLGYKKIFN-SSNPFEWM-EMISLQRKSNFFEGKVAEYAK 313


>gi|330804590|ref|XP_003290276.1| hypothetical protein DICPUDRAFT_56591 [Dictyostelium purpureum]
 gi|325079602|gb|EGC33194.1| hypothetical protein DICPUDRAFT_56591 [Dictyostelium purpureum]
          Length = 335

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 13/119 (10%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
           RDE LH NF   +  ++  K+E+  L           ++ +A + E  +  +++P   +G
Sbjct: 201 RDEGLHCNFACLLYTKLINKLESKTL---------EAIIRDAVVCEKEFICDSLPVDLIG 251

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           +N+ S  QY++F A+R    +G + ++    NPF WM E+I L+++ NFFE +V EY +
Sbjct: 252 MNSRSMSQYIEFCADRLLVSLGYKKIYN-ASNPFDWM-EMISLQRKTNFFEGKVAEYAK 308


>gi|302904131|ref|XP_003049009.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256729943|gb|EEU43296.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 389

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 67/121 (55%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + + HL  +  +Q  + ++ +A  +E  +  E +P   +G+N
Sbjct: 252 RDEGLHTDFAC-------LLHSHLKGRASKQVIQDIITDAVTIEQEFLTEALPCALLGMN 304

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A   +QY++F+A+R    +G E ++K + NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 305 ADLMKQYIEFVADRLLVALGNEKVYK-SANPFDFM-ENISLGGKTNFFEKRVGDYQKAGV 362

Query: 122 L 122
           L
Sbjct: 363 L 363


>gi|224046583|ref|XP_002198998.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
          Length = 362

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       +L  +  +++   ++  A  +E  +  E +P G +G+N
Sbjct: 237 RDEGLHCDFACLMFH-------YLVNRPSEERVCEIIVNAVEIEQEFLTEALPVGLIGMN 289

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F   ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 290 CTLMKQYIEFVADRLLMELGFSKVFN-VENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 346


>gi|7672989|gb|AAF66689.1|AF144620_1 ribonucleotide reductase small subunit [shrimp white spot syndrome
           virus]
          Length = 413

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 66/118 (55%), Gaps = 8/118 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   ++ +  ++ P       +++   ++ EA  +E  +   ++P   VG+N
Sbjct: 250 RDEGLHRDFACMLLKKGFVDTPS------RERILEIVTEAVRIEQEFLTVSLPVKLVGMN 303

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A++   ++GLE  +  T NPFP+M   I L+ + NFFE RV EYQ+ 
Sbjct: 304 CKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMDN-ISLENKTNFFEKRVAEYQRA 359


>gi|322693757|gb|EFY85606.1| ribonucleoside-diphosphate reductase M2 subunit [Metarhizium
           acridum CQMa 102]
          Length = 411

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + + HL  +  +Q    ++ +A  +E  +  E +P   +G+N
Sbjct: 273 RDEGLHTDFAC-------LLHSHLKNRASKQIIHDIITDAVAIEKEFLTEALPCALLGMN 325

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +   +QY++F+A+R    +G E ++K T NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 326 SNLMKQYIEFVADRLLVALGNEKVYK-TSNPFDFM-ENISLGGKTNFFEKRVGDYQKAGV 383

Query: 122 L 122
           L
Sbjct: 384 L 384


>gi|46122063|ref|XP_385585.1| hypothetical protein FG05409.1 [Gibberella zeae PH-1]
          Length = 399

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 67/121 (55%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + + HL  +  +Q  + ++ +A  +E  +  E +P   +G+N
Sbjct: 262 RDEGLHTDFAC-------LLHSHLKGRASKQMIQDIITDAVSIEQEFLTEALPCALLGMN 314

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +   +QY++F+A+R    +G E ++K T NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 315 SNLMKQYIEFVADRLLVALGNEKVYKST-NPFDFM-ENISLGGKTNFFEKRVADYQKAGV 372

Query: 122 L 122
           L
Sbjct: 373 L 373


>gi|17158292|ref|NP_477710.1| wsv188 [Shrimp white spot syndrome virus]
 gi|14189948|gb|AAK55515.1|AF267731_1 ribonucleotide reductase small subunit [shrimp white spot syndrome
           virus]
 gi|15021490|gb|AAK77767.1|AF369029_98 ORF98, putative ribonucleotide reductase small subunit (RR2)
           [shrimp white spot syndrome virus]
 gi|17016586|gb|AAL33192.1| wsv188 [shrimp white spot syndrome virus]
 gi|19481835|gb|AAL89111.1| WSSV243 [shrimp white spot syndrome virus]
          Length = 413

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 66/118 (55%), Gaps = 8/118 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   ++ +  ++ P       +++   ++ EA  +E  +   ++P   VG+N
Sbjct: 250 RDEGLHRDFACMLLKKGFVDTPS------RERILEIVTEAVRIEQEFLTVSLPVKLVGMN 303

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A++   ++GLE  +  T NPFP+M   I L+ + NFFE RV EYQ+ 
Sbjct: 304 CKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMDN-ISLENKTNFFEKRVAEYQRA 359


>gi|89268988|emb|CAJ81953.1| ribonucleotide reductase m2 polypeptide [Xenopus (Silurana)
           tropicalis]
 gi|89269815|emb|CAJ81580.1| ribonucleotide reductase m2 polypeptide [Xenopus (Silurana)
           tropicalis]
          Length = 386

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++   ++ +A  +E  +  E +P   +G+N
Sbjct: 261 RDEGLHCDFACLMFK-------HLVNKPSEERVVQLITDAVQIEQEFLTEALPVNLIGMN 313

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +FK T NPF +M E I L+ + NFFE +V EYQ+
Sbjct: 314 CTLMKQYIEFVADRLLLELGFNKVFKAT-NPFDFM-ENISLEGKTNFFEKKVGEYQK 368


>gi|294890631|ref|XP_002773236.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239878288|gb|EER05052.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 350

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N +       +T+   ++   ++  A  +E  +  E++P   +G+N
Sbjct: 208 RDEGLHADFACLLYNMMH------YTRLPDERVHEIVRGAVDVERVFISESLPVSLIGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    +Y++F+A+R    +G   L+  T NPF WM ++I L+ + NFFE RV EYQ+G 
Sbjct: 262 SQLMCRYIEFVADRLLVALGHPKLYNAT-NPFDWM-KMISLQGKTNFFEKRVGEYQKGG 318


>gi|56118690|ref|NP_001007890.1| ribonucleotide reductase M2, gene 2 [Xenopus (Silurana) tropicalis]
 gi|51258920|gb|AAH80161.1| ribonucleotide reductase M2 polypeptide [Xenopus (Silurana)
           tropicalis]
          Length = 386

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++   ++ +A  +E  +  E +P   +G+N
Sbjct: 261 RDEGLHCDFACLMFK-------HLVNKPSEERVVQLITDAVQIEQEFLTEALPVNLIGMN 313

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +FK T NPF +M E I L+ + NFFE +V EYQ+
Sbjct: 314 CTLMKQYIEFVADRLLLELGFNKVFKAT-NPFDFM-ENISLEGKTNFFEKKVGEYQK 368


>gi|322709430|gb|EFZ01006.1| ribonucleoside-diphosphate reductase M2 subunit [Metarhizium
           anisopliae ARSEF 23]
          Length = 414

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + + HL  +  +Q    ++ +A  +E  +  E +P   +G+N
Sbjct: 276 RDEGLHTDFAC-------LLHSHLKNRASKQVIYDIITDAVAIEQEFLTEALPCALLGMN 328

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +   +QY++F+A+R    +G E ++K T NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 329 SNLMKQYIEFVADRLLVALGNEKVYK-TSNPFDFM-ENISLGGKTNFFEKRVGDYQKAGV 386

Query: 122 L 122
           L
Sbjct: 387 L 387


>gi|332519182|ref|ZP_08395649.1| Ribonucleoside-diphosphate reductase [Lacinutrix algicola 5H-3-7-4]
 gi|332045030|gb|EGI81223.1| Ribonucleoside-diphosphate reductase [Lacinutrix algicola 5H-3-7-4]
          Length = 327

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 8/121 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F +       +   HL  K  +++ R +L +A  +E  +  E++P   +G+N
Sbjct: 199 RDEGMHCDFAV------HLHEHHLINKVPKERIREILVDALNIEREFITESLPVSLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+ +     +G E  +  T NPF +M ++I L+ + NFFE RV+EYQ+   
Sbjct: 253 SKLMSQYLEFVTDGLLQDLGCEKEYG-TANPFDFM-DMISLQGKTNFFEKRVSEYQKAGV 310

Query: 122 L 122
           L
Sbjct: 311 L 311


>gi|1710399|sp|P50649|RIR2_PLAFG RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
           AltName: Full=Ribonucleotide reductase R2 subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|349790|gb|AAA29754.1| ribonucleotide reductase R2 subunit [Plasmodium falciparum]
          Length = 322

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 70/121 (57%), Gaps = 11/121 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEI--AYAHETMPKGFVG 59
           RDE LH +F   + + +  + P       +Q  + ++ EA  +E+  ++  E++P   +G
Sbjct: 195 RDEGLHTDFNCLIYSLLDNKLP-------EQMVQNIVKEAGGVEVEKSFICESLPCDLIG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +N+    QY++F+A+R    +G   +F +++NPF WM ++I L+ + NFFE RV +YQ+ 
Sbjct: 248 MNSRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWM-DLISLQGKTNFFEKRVADYQKS 305

Query: 120 A 120
            
Sbjct: 306 G 306


>gi|145553335|ref|XP_001462342.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124430181|emb|CAK94969.1| unnamed protein product [Paramecium tetraurelia]
          Length = 355

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +   HL  K   Q+   ++  A  +E  +  E +P   +G+N
Sbjct: 230 RDEGLHTDFAC-------LLYKHLVNKMSNQRIHEIISSAVEIEKEFISEALPVELIGMN 282

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +   +QY++F+A+R    +G   ++  ++NPF WM ++I L+ + NFFE RV +YQ+  
Sbjct: 283 SNLMKQYIEFVADRLIFALGAPKIYN-SKNPFEWM-DMISLQGKTNFFERRVGDYQKAG 339


>gi|167519412|ref|XP_001744046.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778008|gb|EDQ91624.1| predicted protein [Monosiga brevicollis MX1]
          Length = 329

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K + P       +++   ++ +A  +E  +    +P G +G+N
Sbjct: 204 RDEGLHTDFACLMFSMLK-KRPS------KERVTGIIMDAVEIEQDFLTNALPCGLLGMN 256

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A   +QY++F+++R    +G E +F  +ENPF +M E I ++ + NFFE RV EYQ+  
Sbjct: 257 ATLMKQYIEFVSDRLLVALGCEKIFN-SENPFDFM-ESISIEGKTNFFEKRVGEYQKAG 313


>gi|291244313|ref|XP_002742041.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
           [Saccoglossus kowalevskii]
          Length = 463

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 67/118 (56%), Gaps = 9/118 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K  +++ R ++ +A  +E  + +E +P G +G+N
Sbjct: 337 RDEGLHCDFACLIFS-------HLTYKPSKERIRNIITQAVDIEKEFWNEALPVGLIGMN 389

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                 Y++F+A+R   ++  + ++ + ENPF +M E I L+ + NFFE RV EYQ+ 
Sbjct: 390 VTLMNYYVEFVADRLLLELNCDKVY-HRENPFDFM-ENISLEGKTNFFEKRVGEYQKA 445


>gi|156102402|ref|XP_001616894.1| ribonucleoside-diphosphate reductase small chain [Plasmodium vivax
           SaI-1]
 gi|148805768|gb|EDL47167.1| ribonucleoside-diphosphate reductase small chain, putative
           [Plasmodium vivax]
          Length = 349

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P       ++  + ++ EA  +E ++  E++P   +G+N
Sbjct: 224 RDEGLHTDFNCLIYSLLENKLP-------EEVVQNIVKEAVEVERSFICESLPCDLIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G   +F + +NPF WM ++I L+ + NFFE RV +YQ+  
Sbjct: 277 SRLMSQYIEFVADRLLECLGSPKIF-HAKNPFNWM-DLISLQGKTNFFEKRVADYQKSG 333


>gi|148234092|ref|NP_001079369.1| ribonucleotide reductase M2 B (TP53 inducible) [Xenopus laevis]
 gi|27371032|gb|AAH41209.1| MGC52676 protein [Xenopus laevis]
          Length = 386

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++   ++ +A  +E  +  E +P   +G+N
Sbjct: 261 RDEGLHCDFACLMFK-------HLIRKPSEERVVELITDAVQIEQEFLTEALPVNLIGMN 313

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G + +FK T NPF +M E I L+ + NFFE +V EYQ+
Sbjct: 314 CTLMKQYIEFVADRLLLELGFKKVFKAT-NPFDFM-ENISLEGKTNFFEKKVGEYQK 368


>gi|187903099|ref|YP_001883390.1| ribonucleoside diphosphate reductase small subunit, rr2 [Musca
           domestica salivary gland hypertrophy virus]
 gi|187384748|gb|ACD03521.1| ribonucleoside diphosphate reductase small subunit, rr2 [Musca
           domestica salivary gland hypertrophy virus]
          Length = 343

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 66/117 (56%), Gaps = 8/117 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F + +  +  +  P       +++   ++ EA  +E  +  + +P   +G+N
Sbjct: 211 RDEGMHCDFAVLLFKRYLVNRPS------EERVGEIVREAVTIEQEFLTDALPVSLIGMN 264

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R    +G++ ++  T+NPF +M ++I L  + NFFE RV +YQ+
Sbjct: 265 CGLMSQYIEFVADRLLVDLGMKRIYN-TKNPFDFM-DMISLDGKTNFFEKRVGDYQR 319


>gi|301117384|ref|XP_002906420.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
           infestans T30-4]
 gi|262107769|gb|EEY65821.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
           infestans T30-4]
          Length = 379

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + +++  + P     E  + + T+ HE       +  +++P   +G+N
Sbjct: 254 RDEGMHTDFACLLYSKLVTKLPESRVHEIVRDAVTIEHE-------FVRDSLPVELIGMN 306

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R  + +G+  ++ + +NPF WM ++I L+ + NFFE RV EY +  
Sbjct: 307 SGLMCQYIEFVADRLLYSLGVSKIY-HAKNPFDWM-DMISLQGKTNFFEKRVGEYSKAG 363


>gi|312889900|ref|ZP_07749444.1| Ribonucleoside-diphosphate reductase [Mucilaginibacter paludis DSM
           18603]
 gi|311297432|gb|EFQ74557.1| Ribonucleoside-diphosphate reductase [Mucilaginibacter paludis DSM
           18603]
          Length = 343

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 67/124 (54%), Gaps = 9/124 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H  F   + + +         K  ++   T++ +A  +E  +  + +P   +G+N
Sbjct: 217 RDEGMHCEFACLLYSMLS-------NKLSKEAVTTIIADAVEIEKEFVTDALPVNLIGMN 269

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R   ++G + L+  T NPF +M E+I L+ + NFFE RV +YQ+   
Sbjct: 270 AKLMSQYIEFVADRWLQELGYDKLYHAT-NPFDFM-EMISLQGKTNFFEKRVGDYQKSGV 327

Query: 122 LKWD 125
           L  D
Sbjct: 328 LNND 331


>gi|332247268|ref|XP_003272775.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           isoform 1 [Nomascus leucogenys]
          Length = 434

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 309 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 361

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 362 CILMKQYIEFVADRLMLELGFGKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 416


>gi|291276761|ref|YP_003516533.1| ribonucleoside-diphosphate reductase subunit beta [Helicobacter
           mustelae 12198]
 gi|290963955|emb|CBG39794.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter
           mustelae 12198]
          Length = 344

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I  +K E P L+ K+ +++   M   A  +E A+         +GL 
Sbjct: 221 RDEVTHLILFQNMIRTLKKERPDLFDKDLEEEIVEMFRRAVEIEAAWGEYITQGQILGLT 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
                QY+Q++A++R  ++G+  L+   E+P  W+ +     +++ NFFE +VT Y +G+
Sbjct: 281 GEVIHQYIQYLADQRLSKVGMPKLYN-VEHPIKWVEQYASFNEQRTNFFEAKVTNYAKGS 339


>gi|118474076|ref|YP_891239.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           fetus subsp. fetus 82-40]
 gi|118413302|gb|ABK81722.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           fetus subsp. fetus 82-40]
          Length = 340

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+T E + K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFTSEVEAKIYEMFKKAGDLEIEWGKYITGNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ + R   IGL+ L+   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDDRLTSIGLKKLYN-AKHPIKWVDDFAKFNDQKSNFFESKVTNYSKGS 334


>gi|929959|gb|AAA74020.1| ribonuleotide reductase small subunit [Urechis caupo]
          Length = 399

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K  Q++   ++ +A  +E ++  E +P   +G+N
Sbjct: 271 RDEGLHCDFACLMFS-------HLKNKPSQERVYDIIRDAVRIEQSFLTEALPVNLIGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G  P     ENPF +M   I L+ + NFFE RV EYQ+
Sbjct: 324 CKLMAQYIEFVADRLLLELGC-PKIWNVENPFDFMDN-ISLEGKTNFFEKRVGEYQK 378


>gi|168186576|ref|ZP_02621211.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum C str. Eklund]
 gi|169295422|gb|EDS77555.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum C str. Eklund]
          Length = 342

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K EN  ++T+   ++ R M+      EI +         +G+N
Sbjct: 214 RDEITHLILFQNIIKELKNENLDIFTESIIEEFRMMMKTGVEHEIKWGQYVTNNEILGIN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y+++++N R + IGLE L+ + TE+P  W+     L   K +FFE +VT Y + 
Sbjct: 274 NNLIEKYIKYLSNLRLNAIGLEVLYPEITEHPMEWIENFSKLNNTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|34482564|emb|CAE09564.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN [Wolinella
           succinogenes]
          Length = 283

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN +K E P L+TK  +++   M  +A  +E A+         +GL 
Sbjct: 159 RDEVTHLLIFQNMINALKKERPDLFTKSLEEEVVEMFRKAVAVESAWGDYITQGQILGLT 218

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +    +Y+Q++A+ R  ++G+ P+    ++P  W+ +     ++K NFFE  VT Y +G+
Sbjct: 219 SEIIHEYIQYLADDRLKRVGM-PILYNAKHPIKWVDQFSSFNEQKTNFFEGNVTNYAKGS 277


>gi|161760549|ref|NP_906664.2| ribonucleotide-diphosphate reductase subunit beta [Wolinella
           succinogenes DSM 1740]
          Length = 341

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN +K E P L+TK  +++   M  +A  +E A+         +GL 
Sbjct: 217 RDEVTHLLIFQNMINALKKERPDLFTKSLEEEVVEMFRKAVAVESAWGDYITQGQILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +    +Y+Q++A+ R  ++G+ P+    ++P  W+ +     ++K NFFE  VT Y +G+
Sbjct: 277 SEIIHEYIQYLADDRLKRVGM-PILYNAKHPIKWVDQFSSFNEQKTNFFEGNVTNYAKGS 335


>gi|224129040|ref|XP_002328875.1| predicted protein [Populus trichocarpa]
 gi|222839305|gb|EEE77642.1| predicted protein [Populus trichocarpa]
          Length = 329

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 200 RDEGLHCDFACLLYSLLR-------KKLSEEQVKGIVKDAVDIEREFVVDALPCALVGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 253 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFFEKRVGEYQKAS 309


>gi|55742360|ref|NP_001007164.1| ribonucleoside-diphosphate reductase subunit M2 B [Danio rerio]
 gi|29561808|emb|CAD87804.1| novel protein similar to vertebrate ribonucleotide reductase M2 B
           (TP53 inducible) (RRM2B) [Danio rerio]
          Length = 349

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH NF   +I    ++ P +       +   ++ +A  +E  +  E +P   +G+N
Sbjct: 224 RDEGLHCNFAC-LIYSYLVKKPSV------DRVNDIIAKAVSIEQEFLTEALPVNLIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R    +GL P    +ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 277 CSLMKQYIEFVADRLLTDLGL-PKAYCSENPFDFM-ESISLEGKTNFFEKRVAEYQR 331


>gi|28393533|gb|AAO42187.1| putative ribonucleoside-diphosphate reductase small chain
           [Arabidopsis thaliana]
          Length = 243

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++       TK  + + + ++ +A  +E  +  + +    VG+N
Sbjct: 111 RDEGLHCDFACLIYSLLR-------TKFDEDRLKAIVCDAVEIEREFVCDALSCALVGMN 163

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G   ++  T NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 164 RELMSQYIEFVADRLLAALGCGKVYGVT-NPFDWM-ELISLQGKTNFFEKRVGEYQKAS 220


>gi|145352915|ref|XP_001420779.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581014|gb|ABO99072.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 346

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +  ENP L  K   Q    ++ +A  +E  +  + +    VG+N
Sbjct: 220 RDEGLHCDFACLLYSML--ENP-LSEKVLHQ----LVGDAVTIEKEFVCDALSCSLVGMN 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A     Y++F+A+R   Q+G+  L+    NPF WM E+I L+ + NFFE RV +YQ+   
Sbjct: 273 ANMMSTYIEFVADRLLLQLGVSKLYNAV-NPFDWM-ELISLQGKANFFEHRVDQYQKAGV 330

Query: 122 LK 123
           ++
Sbjct: 331 MQ 332


>gi|291220709|ref|XP_002730368.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
           [Saccoglossus kowalevskii]
          Length = 402

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K  QQ+   ++ +A  +E  +  + +P   +G+N
Sbjct: 277 RDEGLHCDFACLMFS-------HLTNKPSQQRIIEIIRDAVKIEQEFLTDALPVSLIGMN 329

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R    +G   ++   ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 330 KDLMKQYIEFVADRLLLDLGCNKIYN-KENPFDFM-ENISLEGKTNFFEKRVGEYQK 384


>gi|126662515|ref|ZP_01733514.1| ribonucleoside-diphosphate reductase 1, beta subunit [Flavobacteria
           bacterium BAL38]
 gi|126625894|gb|EAZ96583.1| ribonucleoside-diphosphate reductase 1, beta subunit [Flavobacteria
           bacterium BAL38]
          Length = 325

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 70/124 (56%), Gaps = 8/124 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F +       + + H+  K  +++   ++ +A  +E  +  E++P   +G+N
Sbjct: 198 RDEGMHCDFAV------HLHSHHIVNKVPKERITEIIVDALNIERQFITESLPVSLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+ +R   ++G + ++  + NPF +M ++I L+ + NFFE RV EYQ+   
Sbjct: 252 ATLMTQYLEFVTDRLLVELGCDRVYN-SSNPFDFM-DMISLQGKTNFFEKRVAEYQKAGV 309

Query: 122 LKWD 125
           +  D
Sbjct: 310 MNSD 313


>gi|85710107|ref|ZP_01041172.1| ribonucleotide reductase beta subunit [Erythrobacter sp. NAP1]
 gi|85688817|gb|EAQ28821.1| ribonucleotide reductase beta subunit [Erythrobacter sp. NAP1]
          Length = 346

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDE+LH   GI  +     E     TK  ++    +  +   LE A+       G V G
Sbjct: 189 VRDETLHCE-GIIKMFHTFCEERDCLTKAVKEDIIDICQKTVRLEDAFIDLAFEMGPVEG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           + A   ++Y+++IA+ R  Q+ L+P++   E+P PW+S +++  +  NFFE R TEY +G
Sbjct: 248 MTAKDIKKYIRYIADWRLGQLNLQPIYMIDEHPLPWLSPLLNGVEHANFFEARATEYSKG 307

Query: 120 A 120
           A
Sbjct: 308 A 308


>gi|9633651|ref|NP_051729.1| ribonucleotide reductase, small subunit [Myxoma virus]
 gi|6523870|gb|AAF14903.1|AF170726_19 ribonucleotide reductase, small subunit [Myxoma virus]
 gi|301134541|gb|ADK63655.1| M015L [Myxoma virus]
          Length = 322

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K   P       +++  +++ EA ++E  +  E +P   +G+N
Sbjct: 198 RDEGLHCDFACLMFKHLK-HTPS------EERVASIIKEAVVIEQRFLTEALPVRLIGMN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G   +F  T NPF +M E I L+ + NFFE RV++YQ+
Sbjct: 251 CELMCQYIEFVADRLIAELGYSKIFSAT-NPFDFM-ENISLEGKTNFFEKRVSDYQR 305


>gi|170664480|gb|ACB28637.1| small subunit ribonucleotide reductase [Myxoma virus]
 gi|170664652|gb|ACB28808.1| small subunit ribonucleotide reductase [recombinant virus
           6918VP60-T2]
          Length = 322

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K   P       +++  +++ EA ++E  +  E +P   +G+N
Sbjct: 198 RDEGLHCDFACLMFKHLK-HTPS------EERVASIIKEAVVIEQRFLTEALPVRLIGMN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G   +F  T NPF +M E I L+ + NFFE RV++YQ+
Sbjct: 251 CELMCQYIEFVADRLIAELGYSKIFSAT-NPFDFM-ENISLEGKTNFFEKRVSDYQR 305


>gi|255079598|ref|XP_002503379.1| predicted protein [Micromonas sp. RCC299]
 gi|226518645|gb|ACO64637.1| predicted protein [Micromonas sp. RCC299]
          Length = 335

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + I         K  +   R ++ EA  +E  +  + +P   VG+N
Sbjct: 208 RDEGLHRDFACLLYSYIN-------KKPNESVVRQIVKEAVEIEKEFVCDALPCALVGMN 260

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    +Y++F+A+    Q+G+   +    NPF WM E+I L+ + NFFE RV EYQ+  
Sbjct: 261 ADLMSEYIEFVADHLLGQLGMSKEYN-AANPFDWM-ELISLQGKTNFFEKRVGEYQKSG 317


>gi|315635423|ref|ZP_07890689.1| ribonucleotide-diphosphate reductase beta subunit [Arcobacter
           butzleri JV22]
 gi|315480181|gb|EFU70848.1| ribonucleotide-diphosphate reductase beta subunit [Arcobacter
           butzleri JV22]
          Length = 339

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+T+E ++  R M  +A  LE ++         +G  
Sbjct: 215 RDEVTHLLLFQNMINSVRKERPDLFTQELEETVRAMFRKAVDLEASWGAYITQGQILGFT 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
                QY++++A+RR   +G +  +   ++P PW+        ++ NFFE  V  Y +G+
Sbjct: 275 DGIIRQYIEYLADRRLEAVGYKAEYG-VKHPIPWVDGYASFNDQRTNFFEGNVVNYSKGS 333


>gi|49899161|gb|AAH75746.1| Ribonucleotide reductase M2 polypeptide [Danio rerio]
          Length = 386

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL +K  ++  + ++  A  +E  +  + +P   +G+N
Sbjct: 261 RDEGLHCDFACLMFK-------HLISKPSEETVKKIIMNAVEIEQEFLTDALPVKLIGMN 313

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G + +++  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 314 CDLMKQYIEFVADRLLLELGFDKVYR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 368


>gi|298713498|emb|CBJ27053.1| Ribonucleoside-diphosphate reductase small chain [Ectocarpus
           siliculosus]
          Length = 504

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 9/118 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   ++        K  ++    ++ EA  +E ++    +P   +G+N
Sbjct: 374 RDEGLHCDFACQLFASLE-------NKPSRETVMAIVREAVEVEKSFICGALPCSLIGMN 426

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           A    QY++F+A+R    +G    +  T+NPF WM ++I L+ + NFFE RV EYQ+ 
Sbjct: 427 AGVMSQYIEFVADRLLGSLGYGKSYG-TQNPFDWM-DLISLQGKTNFFEKRVGEYQKA 482


>gi|218197485|gb|EEC79912.1| hypothetical protein OsI_21460 [Oryza sativa Indica Group]
          Length = 345

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  + + + ++ +A  +E  +  + +P   VG+N
Sbjct: 215 RDEGLHCDFACLLYDLLR-------GKLDESRVQEIVADAVDIEREFVCDALPVALVGMN 267

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G + ++    NPF WM E+I L+ + NFFE RV +YQ+ +
Sbjct: 268 GELMSQYIEFVADRLLMALGCKKMYN-VANPFDWM-ELISLQGKTNFFEKRVGDYQKAS 324


>gi|10344|emb|CAA26307.1| unnamed protein product [Spisula solidissima]
          Length = 300

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K  Q++   ++ EA  +E  +  E +P   +G+N
Sbjct: 172 RDEGLHCDFACLMFS-------HLVNKPSQERIHQIIDEAVKIEQVFLTEALPCRLIGMN 224

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++  + L+   ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 225 CDLMRQYIEFVADRLLLELKCDKLYN-KENPFDFM-EHISLEGKTNFFEKRVGEYQK 279


>gi|115466138|ref|NP_001056668.1| Os06g0127900 [Oryza sativa Japonica Group]
 gi|55296211|dbj|BAD67929.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
 gi|113594708|dbj|BAF18582.1| Os06g0127900 [Oryza sativa Japonica Group]
 gi|186920368|gb|ACC95437.1| ribonucleotide diphosphate reductase small subunit 2 [Oryza sativa
           Japonica Group]
 gi|215706414|dbj|BAG93270.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222634884|gb|EEE65016.1| hypothetical protein OsJ_19968 [Oryza sativa Japonica Group]
          Length = 345

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  + + + ++ +A  +E  +  + +P   VG+N
Sbjct: 215 RDEGLHCDFACLLYDLLR-------GKLDESRVQEIVADAVDIEREFVCDALPVALVGMN 267

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G + ++    NPF WM E+I L+ + NFFE RV +YQ+ +
Sbjct: 268 GELMSQYIEFVADRLLMALGCKKMYN-VANPFDWM-ELISLQGKTNFFEKRVGDYQKAS 324


>gi|266918|sp|P07201|RIR2_SPISO RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit;
           AltName: Full=p41
 gi|10342|emb|CAA38919.1| M2 (small) subunit of ribonucleotide reductase [Spisula
           solidissima]
          Length = 384

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K  Q++   ++ EA  +E  +  E +P   +G+N
Sbjct: 256 RDEGLHCDFACLMFS-------HLVNKPSQERIHQIIDEAVKIEQVFLTEALPCRLIGMN 308

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++  + L+   ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 309 CDLMRQYIEFVADRLLLELKCDKLYN-KENPFDFM-EHISLEGKTNFFEKRVGEYQK 363


>gi|221120499|ref|XP_002159812.1| PREDICTED: similar to hCG23833 [Hydra magnipapillata]
          Length = 387

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +   H+  K  +++ + ++ +A  +EI +  E++P   +G+N
Sbjct: 255 RDEGLHCDFAC-------LMYKHIVNKPSEERVKQIIRDAVAIEIEFLTESLPCDLLGMN 307

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               + Y++F A+R  + +G    +   ENPF +M E I L ++ NFFE+RV++YQ+  
Sbjct: 308 KSLMKTYIEFCADRLINALGYSKEWN-VENPFDFM-ENISLARKANFFESRVSDYQKAG 364


>gi|188996383|ref|YP_001930634.1| Ribonucleoside-diphosphate reductase [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931450|gb|ACD66080.1| Ribonucleoside-diphosphate reductase [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 326

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 64/116 (55%), Gaps = 3/116 (2%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60
           DESLHL  GI+ I  +  ENP +    +F +  R  + +A  LE+ Y         + G+
Sbjct: 209 DESLHLQNGIEAILTMVEENPEIVDDYQFVENIRQSIIDAVELELNYLKTKFGGTTIFGV 268

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
           +    E+YM++IA+RR  ++G +P F   +NP  ++ +  D+KK  NFFE   TEY
Sbjct: 269 SYGELERYMKYIADRRLIELGFDPQFGIDQNPLKFLQKE-DVKKLTNFFEVSSTEY 323


>gi|157736292|ref|YP_001488975.1| ribonucleotide-diphosphate reductase subunit beta [Arcobacter
           butzleri RM4018]
 gi|157698146|gb|ABV66306.1| ribonucleoside-diphosphate reductase, beta chain [Arcobacter
           butzleri RM4018]
          Length = 339

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+T E ++  R M  +A  LE ++         +G  
Sbjct: 215 RDEVTHLLLFQNMINSVRKERPDLFTSELEETVRAMFRKAVDLEASWGAYITQGQILGFT 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
                QY++++A+RR   +G +  +   ++P PW+        ++ NFFE  V  Y +G+
Sbjct: 275 DGIIRQYIEYLADRRLEAVGYKAEYG-VKHPIPWVDGYASFNDQRTNFFEGNVVNYSKGS 333


>gi|256421019|ref|YP_003121672.1| ribonucleoside-diphosphate reductase [Chitinophaga pinensis DSM
           2588]
 gi|256035927|gb|ACU59471.1| Ribonucleoside-diphosphate reductase [Chitinophaga pinensis DSM
           2588]
          Length = 323

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F   +   ++   P       +++  T++ +A  +E  +  + +P   +G+N
Sbjct: 198 RDEGLHCEFACLLYGMLENRLP-------EEQVHTIIRDAVAIEKEFITDALPVALIGMN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    +Y++F+A+R   ++G   +F  T NPF +M E+I L+ + NFFE RV +YQ+  
Sbjct: 251 SKLMSEYIEFVADRWLSELGYTKIFN-TANPFDFM-EMISLQGKTNFFEKRVGDYQKAG 307


>gi|315452596|ref|YP_004072866.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter felis
           ATCC 49179]
 gi|315131648|emb|CBY82276.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter felis
           ATCC 49179]
          Length = 347

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL     +I+ +K E P L++K+  ++   M  EA  LE  +         + LN
Sbjct: 223 RDEVTHLALFQSMIHTLKKERPDLFSKDLVEEILEMFKEAVDLESTWGRVITQGEILDLN 282

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
             +   Y++++A+ R H IGL P   +T++P  W+ +      ++ NFFE RV+ Y +G+
Sbjct: 283 PVTLRAYIEYLADTRLHAIGL-PKIYHTKHPMRWVDQFSSFNSQRSNFFEARVSNYSKGS 341


>gi|324519017|gb|ADY47264.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum]
          Length = 376

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 9/124 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K  +++   ++ EA  +E  Y  E +P G +G+N
Sbjct: 251 RDEGLHRDFACLMFS-------HLKKKPNKERIYEIIREAVKIEQEYLTEALPVGLIGMN 303

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++++A+    ++    L+   ENPF +M+  I ++ + NFFE RV+EYQ+   
Sbjct: 304 CELMSQYIEYVADHLLTELKCPKLYN-MENPFDFMAR-ISIEAKTNFFEKRVSEYQKAGV 361

Query: 122 LKWD 125
           L  D
Sbjct: 362 LSTD 365


>gi|290977320|ref|XP_002671386.1| predicted protein [Naegleria gruberi]
 gi|284084954|gb|EFC38642.1| predicted protein [Naegleria gruberi]
          Length = 338

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 67/118 (56%), Gaps = 8/118 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K      +TK  QQ   +++ EA  +E  +  E++P   +G+N
Sbjct: 212 RDEGLHTDFACLLYSTLK------FTKLPQQVVHSLVSEAVEIEKEFICESLPVDLIGMN 265

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +   +QY++ +A+R    +G + ++  + NPF WM+ +I +  + NFFE +V EY + 
Sbjct: 266 SRLMQQYIEMVADRLLVSLGYDKIYN-SPNPFDWMN-IISVSGKTNFFEKKVGEYAKA 321


>gi|145349720|ref|XP_001419276.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579507|gb|ABO97569.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 329

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +         K  ++  R ++ EA  +E  +  +++P   VG+N
Sbjct: 201 RDEGLHRDFACLLFSMLN-------NKPSEETIRKIVTEAVEIEKEFVCDSLPCALVGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A     Y++++A+     +GL   +  T NPF WM E+I L+ + NFFE RV EYQ+  
Sbjct: 254 AGMMSDYIEYVADHLFCSLGLAKEYN-TTNPFDWM-ELISLQGKTNFFEKRVGEYQKAG 310


>gi|79160106|gb|AAI08038.1| Rrm2b protein [Danio rerio]
          Length = 349

 Score = 67.0 bits (162), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH NF         +   +L  K    +   ++ +A  +E  +  E +P   +G+N
Sbjct: 224 RDEGLHCNFAC-------LMYSYLVKKPSVDRVNDIIAKAVSIEQEFLTEALPVNLIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R    +GL P    +ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 277 CSLMKQYIEFVADRLLTDLGL-PKAYCSENPFDFM-ESISLEGKTNFFEKRVAEYQR 331


>gi|289620013|emb|CBI53457.1| unnamed protein product [Sordaria macrospora]
          Length = 410

 Score = 67.0 bits (162), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q  + ++ +A  +E  +  E +P   +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLNNRPSKQLIQDIIVDAVRIEQEFLTEALPCALLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A   +QY++F+A+R    +G E +++ T NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 325 ADLMKQYIEFVADRLLVALGNEKVYRST-NPFDFM-ENISLGGKTNFFEKRVADYQKAG 381


>gi|91081999|ref|XP_969259.1| PREDICTED: similar to AGAP006818-PA [Tribolium castaneum]
 gi|270007377|gb|EFA03825.1| hypothetical protein TcasGA2_TC013940 [Tribolium castaneum]
          Length = 374

 Score = 67.0 bits (162), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K  +++ ++++ +A  +E  +  E +P   +G+N
Sbjct: 250 RDEGLHCDFACLMFS-------HLVQKPSKERIQSIIQDAVKIEKEFLTEALPVSMIGMN 302

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R   ++G E ++  ++NPF +M+ +I  + + NFFE +V EYQ+  
Sbjct: 303 CALMCQYIEFVADRLLGELGCEKIYN-SQNPFDFMT-IISNEGKTNFFEKKVGEYQKSG 359


>gi|187778605|ref|ZP_02995078.1| hypothetical protein CLOSPO_02200 [Clostridium sporogenes ATCC
           15579]
 gi|187772230|gb|EDU36032.1| hypothetical protein CLOSPO_02200 [Clostridium sporogenes ATCC
           15579]
          Length = 342

 Score = 67.0 bits (162), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 70/126 (55%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K ENP+++T+E +++ R M+      EI +         +GLN
Sbjct: 214 RDEVTHLVLFQNIIKELKSENPNIFTEELEEEFREMMRMGVEHEIKWGQYVTNNEILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               ++Y+++++N R   IGL+PL+ +  ++P  W+     L   K +FFE +VT Y + 
Sbjct: 274 DELIDKYIKYLSNLRLTAIGLKPLYPEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AVFDFD 339


>gi|325261084|ref|ZP_08127822.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
           D5]
 gi|324032538|gb|EGB93815.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
           D5]
          Length = 347

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     ++ ++K E P L+T E  +K R+M+ E    EI + H  +     GLN
Sbjct: 219 RDENTHLWLFRSILMELKKEEPWLFTAEKTEKYRSMIREGCEQEIRWGHYVIGDDIQGLN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y+Q++ N RC  + LEP+++  E       W+S+  +    K +FFE R T Y 
Sbjct: 279 REMITDYIQYLGNLRCRGLELEPVYEGHEKEPESMSWVSQFSNANMIKTDFFEARSTAYA 338

Query: 118 QGAEL 122
           + + L
Sbjct: 339 KSSAL 343


>gi|237752265|ref|ZP_04582745.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           winghamensis ATCC BAA-430]
 gi|229376507|gb|EEO26598.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           winghamensis ATCC BAA-430]
          Length = 343

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E PHL+TK+  ++   M  EA  +E  +         +GL 
Sbjct: 219 RDEVTHLLLFQNMINSLRKEMPHLFTKDLIEEVLEMFREAVRVESTWGEYITQGQILGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +    +Y++++A+ R  ++GL  L+    +P  W+       ++K NFFE  VT Y +G+
Sbjct: 279 SEIIHEYIRYLADNRLTRVGLPALYN-ARHPIKWVDSFSSFNEQKTNFFEGNVTNYAKGS 337


>gi|260061082|ref|YP_003194162.1| putative ribonucleoside-diphosphate reductase small chain
           [Robiginitalea biformata HTCC2501]
 gi|88785214|gb|EAR16383.1| probable ribonucleoside-diphosphate reductase small chain
           [Robiginitalea biformata HTCC2501]
          Length = 328

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 67/119 (56%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H ++ +       + N HL  K  +++   ++  A  +E  +  E++P   +G+N
Sbjct: 199 RDEGMHCDYAV------HLHNNHLVNKVPKERITQIITNALDIEREFITESLPVSLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+ +R   ++  E ++  T NPF +M ++I L+ + NFFE RV+EYQ+  
Sbjct: 253 AKLMTQYLEFVTDRLLVELECEKVYNST-NPFDFM-DMISLQGKTNFFEKRVSEYQKAG 309


>gi|15606660|ref|NP_214040.1| ribonucleotide reductase beta chain [Aquifex aeolicus VF5]
 gi|18202109|sp|O67475|RIR2_AQUAE RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit;
           Contains: RecName: Full=Aae nrdB intein; AltName:
           Full=Aae RIR2 intein
 gi|2983879|gb|AAC07431.1| ribonucleotide reductase beta chain [Aquifex aeolicus VF5]
          Length = 696

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 7   HLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCE 66
           H+    ++IN ++ ENP L+T E ++        A   EI +         +G+N    E
Sbjct: 577 HVTLFRNIINTLRKENPELFTPEIEKWIVEYFKYAVNEEIKWGQYVTQNQILGINDVLIE 636

Query: 67  QYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGAELKW 124
           +Y++++ N R  QIG +P++ + TENP  W+ E   +   K +FF+ +   Y +  ELKW
Sbjct: 637 RYIKYLGNLRITQIGFDPIYPEVTENPLKWIDEFRKINNTKTDFFQAKPQTYSKANELKW 696


>gi|195119943|ref|XP_002004488.1| GI19586 [Drosophila mojavensis]
 gi|193909556|gb|EDW08423.1| GI19586 [Drosophila mojavensis]
          Length = 393

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +         HL  +  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHCDFAVMMFR-------HLVQRPSRERIIEIISDAVTIEQEFLTDALPVNLIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFFE +V EYQ+
Sbjct: 321 CALMSQYIEFVADRLLVELGVGKIYN-TKNPFTFM-EMISLDGKTNFFEKKVGEYQR 375


>gi|158286793|ref|XP_308927.4| AGAP006818-PA [Anopheles gambiae str. PEST]
 gi|157020637|gb|EAA04227.4| AGAP006818-PA [Anopheles gambiae str. PEST]
          Length = 400

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 67/117 (57%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++   ++ +A L+E  +  + +P   +G+N
Sbjct: 275 RDEGLHCDFACLMFK-------YLVQKPSKERVTEIIRDAVLIEQEFLTKALPVDMLGMN 327

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G E ++ +T+NPF +M E I L+ + NFFE +V EYQ+
Sbjct: 328 CDLMSQYIEFVADRLLLELGCEKIY-HTKNPFSFM-EFISLEGKTNFFEKKVGEYQK 382


>gi|323143005|ref|ZP_08077711.1| ribonucleoside-diphosphate reductase, beta subunit [Succinatimonas
           hippei YIT 12066]
 gi|322417199|gb|EFY07827.1| ribonucleoside-diphosphate reductase, beta subunit [Succinatimonas
           hippei YIT 12066]
          Length = 331

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 10/125 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLH-----EATLLEIAYAHETMPK 55
           + DE+LH    I +  +   +NP LW  + +    ++       E + +++A+    M K
Sbjct: 199 INDETLHTESMIKLFREYIEQNPQLWNDDLKSTIYSIAEKMVELEDSFIDLAFGVNQMQK 258

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
               L     ++Y++FIA+RR   +G++ +F   +NP PW+  ++ +    NFFE RV +
Sbjct: 259 ----LAKEDVKKYIRFIADRRLSAMGMKAIFNEKKNPLPWVDAMLGV-THTNFFENRVVD 313

Query: 116 YQQGA 120
           Y +GA
Sbjct: 314 YAKGA 318


>gi|145537171|ref|XP_001454302.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124422057|emb|CAK86905.1| unnamed protein product [Paramecium tetraurelia]
          Length = 507

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +   H+  K   Q+   ++  A  +E  +  E +P   +G+N
Sbjct: 382 RDEGLHTDFAC-------LLYKHMINKLSIQRVHEIISSAVEIEKEFISEALPVELIGMN 434

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +   +QY++F+A+R    +G   ++  ++NPF WM ++I L+ + NFFE RV +YQ+  
Sbjct: 435 SNLMKQYIEFVADRLIFALGAPKIYN-SKNPFEWM-DMISLQGKTNFFERRVGDYQKAG 491


>gi|67585619|ref|XP_665115.1| ribonucleotide reductase R2 subunit [Cryptosporidium hominis TU502]
 gi|54655552|gb|EAL34885.1| ribonucleotide reductase R2 subunit [Cryptosporidium hominis]
          Length = 296

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K + P         + + ++ EA  +E  +  +++P   +G+N
Sbjct: 171 RDEGLHADFACLIYKALKFKLP-------APRVQQIISEAVEVERNFLCDSLPVDLIGMN 223

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    + +  ++  + NPF WM ++I L+ + NFFE RV EYQ   
Sbjct: 224 SRLMAQYIEFVADRLLFALDIPKIYNVS-NPFDWM-DLISLQGKTNFFEKRVGEYQMAG 280


>gi|312130971|ref|YP_003998311.1| ribonucleoside-diphosphate reductase [Leadbetterella byssophila DSM
           17132]
 gi|311907517|gb|ADQ17958.1| Ribonucleoside-diphosphate reductase [Leadbetterella byssophila DSM
           17132]
          Length = 328

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 67/119 (56%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  +      ++  K  +++  T++ +A  +E  +  + +P   +G+N
Sbjct: 202 RDEGLHRDFACLLYTK------YIVNKLPEEQVYTIIKDAVEIEKEFVSDALPVSLIGMN 255

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           AP   QY++F+A+     + L+ ++  T NPF +M ++I L+ + NFFE RV EYQ+  
Sbjct: 256 APQMCQYIEFVADHLLESLNLKKVYNAT-NPFDFM-DLISLQGKTNFFEKRVGEYQKAG 312


>gi|18859327|ref|NP_571525.1| ribonucleoside-diphosphate reductase subunit M2 [Danio rerio]
 gi|292624782|ref|XP_002665783.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Danio rerio]
 gi|3914657|sp|P79733|RIR2_DANRE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase protein R2 class
           I; AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|1695831|gb|AAB37103.1| ribonucleotide reductase protein R2 class I [Danio rerio]
 gi|27881838|gb|AAH44355.1| Ribonucleotide reductase M2 polypeptide [Danio rerio]
 gi|56207929|emb|CAI21240.1| ribonucleotide reductase M2 polypeptide [Danio rerio]
 gi|182889152|gb|AAI64707.1| Rrm2 protein [Danio rerio]
          Length = 386

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  ++  + ++  A  +E  +  + +P   +G+N
Sbjct: 261 RDEGLHCDFACLMFK-------HLINKPSEETVKKIIMNAVEIEQEFLTDALPVKLIGMN 313

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G + +++  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 314 CDLMKQYIEFVADRLLLELGFDKVYR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 368


>gi|114568952|ref|YP_755632.1| ribonucleotide-diphosphate reductase subunit beta [Maricaulis maris
           MCS10]
 gi|114339414|gb|ABI64694.1| Ribonucleoside-diphosphate reductase [Maricaulis maris MCS10]
          Length = 345

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    I + +    E   L T+E +            LE  +       G V G
Sbjct: 197 IRDESLHCEGMIKLFHAFAEETGAL-TQEVKDDITECCRTVVGLEDKFIDLAFEAGDVEG 255

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     + Y+++IA+ R  Q+GL  ++   E+P PW+SE+++  +  NFFE R TEY +G
Sbjct: 256 MTPDDIKTYIRYIADWRLGQLGLPKIYGVKEHPLPWLSEILNGVEHANFFEARATEYSKG 315

Query: 120 A 120
           A
Sbjct: 316 A 316


>gi|66475262|ref|XP_627447.1| ribonucleotide reductase small subunit, duplicated adjacent gene
           [Cryptosporidium parvum Iowa II]
 gi|9652154|gb|AAF91416.1|AF275635_1 ribonucleotide reductase R2 subunit [Cryptosporidium parvum]
 gi|46228920|gb|EAK89769.1| ribonucleotide reductase small subunit, duplicated adjacent gene
           [Cryptosporidium parvum Iowa II]
          Length = 352

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K + P         + + ++ EA  +E  +  +++P   +G+N
Sbjct: 227 RDEGLHADFACLIYKALKFKLP-------APRVQQIISEAVEVERNFLCDSLPVDLIGMN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    + +  ++  + NPF WM ++I L+ + NFFE RV EYQ   
Sbjct: 280 SRLMAQYIEFVADRLLFALDIPKIYNVS-NPFDWM-DLISLQGKTNFFEKRVGEYQMAG 336


>gi|215401441|ref|YP_002332744.1| RR2b [Spodoptera litura nucleopolyhedrovirus II]
 gi|209483982|gb|ACI47415.1| RR2b [Spodoptera litura nucleopolyhedrovirus II]
          Length = 313

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 14/120 (11%)

Query: 2   RDESLHLNFGIDVIN---QIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
           RDE LH NF     N     K++ P +           M  EA  +E+ +  E +P+  V
Sbjct: 191 RDEGLHTNFACLYYNTRVDQKLDVPTV---------SDMFAEAVAIEMEFFAEALPESLV 241

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           G+NA    +Y++F+A+R   Q+   P   +TENPF +M+  I L+ + NFFE RV EY++
Sbjct: 242 GMNAEMMRKYIEFVADRLLVQLKY-PKIYHTENPFEFMNN-ISLEGKTNFFEKRVGEYKR 299


>gi|298207002|ref|YP_003715181.1| probable ribonucleoside-diphosphate reductase small chain
           [Croceibacter atlanticus HTCC2559]
 gi|83849636|gb|EAP87504.1| probable ribonucleoside-diphosphate reductase small chain
           [Croceibacter atlanticus HTCC2559]
          Length = 325

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 69/124 (55%), Gaps = 8/124 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F +       + N HL  K  +++ R ++ +A  +E  +  E++P   +G+N
Sbjct: 198 RDEGMHCDFAV------HLHNKHLVNKVSKERIREIIVDALNIEREFITESLPASLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+ +R   ++  E  +  T NPF +M ++I L+ + NFFE RV +YQ+   
Sbjct: 252 SNLMTQYLEFVTDRLLLELECEKEYN-TANPFDFM-DMISLQGKTNFFEKRVGDYQKAGV 309

Query: 122 LKWD 125
           +  D
Sbjct: 310 MDQD 313


>gi|223039245|ref|ZP_03609535.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           rectus RM3267]
 gi|222879606|gb|EEF14697.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           rectus RM3267]
          Length = 340

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+T E + K   M   A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRTERPDLFTSEMEAKIYDMFKRAGELEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               EQY++++ ++R   IGL+  +    +P  W+ +      +K NFFE +VT Y +G+
Sbjct: 276 DDIIEQYIRYLIDQRLVAIGLKRRYD-ARHPIKWVDDFAKFNDQKSNFFEAKVTNYSKGS 334


>gi|148230557|ref|NP_001080772.1| ribonucleotide reductase M2 polypeptide [Xenopus laevis]
 gi|28839018|gb|AAH47975.1| Rrm2-prov protein [Xenopus laevis]
          Length = 386

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++   ++  A  +E  +  E +P   +G+N
Sbjct: 261 RDEGLHCDFACLMFR-------HLVHKPSEERVVQLITNAVQIEQEFLTEALPVNLIGMN 313

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +FK + NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 314 CTLMKQYIEFVADRLLLELGFNKVFKAS-NPFDFM-ENISLEGKTNFFEKRVGEYQK 368


>gi|255530602|ref|YP_003090974.1| Ribonucleoside-diphosphate reductase [Pedobacter heparinus DSM
           2366]
 gi|255343586|gb|ACU02912.1| Ribonucleoside-diphosphate reductase [Pedobacter heparinus DSM
           2366]
          Length = 324

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F   +   +K        K  Q++   ++ +A  +E  +  + +P   +G+N
Sbjct: 197 RDEGSHCEFACLLYGMLK-------NKLSQEQVHGIIRDAVEIEKEFVTDALPVALIGMN 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R   ++G   ++  T NPF +M E+I L+ + NFFE RV +YQ+   
Sbjct: 250 AKLMSQYIEFVADRWLQELGYSKIYNAT-NPFDFM-EMISLQGKTNFFEKRVGDYQKSGV 307

Query: 122 L 122
           L
Sbjct: 308 L 308


>gi|224100309|ref|XP_002311826.1| predicted protein [Populus trichocarpa]
 gi|222851646|gb|EEE89193.1| predicted protein [Populus trichocarpa]
          Length = 342

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++    H W     QK   ++ EA  +E  +  E +P   +G+N
Sbjct: 213 RDEGLHCDFACLLYSLLQ-RQLH-W-----QKVYHIVGEAVEIETKFVCEALPCALIGMN 265

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A     Y++F+A+R    +G +  +   ENPF WM E I L+ + NFFE RV +YQ+ +
Sbjct: 266 ATLMGDYIKFVADRLLVALGYQKKYN-VENPFDWM-EFISLQGKANFFERRVGDYQKAS 322


>gi|38229183|ref|NP_938276.1| 20L [Yaba monkey tumor virus]
 gi|38000454|gb|AAR07377.1| 20L [Yaba monkey tumor virus]
          Length = 325

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +   NP L     +   R ++ EA  +E  +  E MP   +G+N
Sbjct: 200 RDEGLHCDFACMMFKHLS--NPPL-----ENVIRDIVIEAVDIEKNFLTEAMPVKLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G +  +  ++NPF +M E I L+ + NFFE RV+EYQ+
Sbjct: 253 CDLMKQYIEFVADRLLLELGCKKYY-CSKNPFDFM-ENISLEGKTNFFEKRVSEYQK 307


>gi|12085003|ref|NP_073405.1| 20L protein [Yaba-like disease virus]
 gi|56404692|sp|Q9DHU2|RIR2_YLDV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|12056179|emb|CAC21258.1| 20L protein [Yaba-like disease virus]
          Length = 325

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         I   HL         R ++ EA  +E  +  E +P   +G+N
Sbjct: 200 RDEGLHCDFAC-------IMFKHLLNPPLNSVVRDIIIEAVNIEKNFLTEAIPVKLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G +  +  ++NPF +M E I L+ + NFFE RV+EYQ+
Sbjct: 253 CDLMKQYIEFVADRLLLELGCDKYY-CSKNPFDFM-ENISLEGKTNFFEKRVSEYQK 307


>gi|171687074|ref|XP_001908478.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943498|emb|CAP69151.1| unnamed protein product [Podospora anserina S mat+]
          Length = 409

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q    ++ +A  +E  +  E +P   +G+N
Sbjct: 271 RDEGLHTDFACLLFS-------HLNNRPSKQLVEDIIRDAVTIEQEFLTEALPCALLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +   +QY++F+A+R    +G + +++ T NPF +M E I L  + NFFE RV EYQ+  
Sbjct: 324 SNLMKQYIEFVADRLLVALGNDKIYRST-NPFDFM-ENISLGGKTNFFEKRVGEYQKAG 380


>gi|319953269|ref|YP_004164536.1| ribonucleoside-diphosphate reductase [Cellulophaga algicola DSM
           14237]
 gi|319421929|gb|ADV49038.1| Ribonucleoside-diphosphate reductase [Cellulophaga algicola DSM
           14237]
          Length = 326

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 70/124 (56%), Gaps = 8/124 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F +       + N H+  +  +++   +L +A  +E  +  E++P   +G+N
Sbjct: 198 RDEGMHCDFAV------HLHNKHIINQVPKERITEILVDALNIEREFITESLPASLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+ +R   ++  + ++  T NPF +M ++I ++ + NFFE RV+EYQ+   
Sbjct: 252 SKLMTQYLEFVTDRLLVELECDKVYNST-NPFDFM-DMIGMEGKTNFFEKRVSEYQKAGV 309

Query: 122 LKWD 125
           L  D
Sbjct: 310 LNSD 313


>gi|332185556|ref|ZP_08387304.1| ribonucleotide reductase, small chain family protein [Sphingomonas
           sp. S17]
 gi|332014534|gb|EGI56591.1| ribonucleotide reductase, small chain family protein [Sphingomonas
           sp. S17]
          Length = 351

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    I + +    E   L TK  +            LE  +       G V G
Sbjct: 189 VRDESLHCEGIIQLFHAFTKERQCL-TKAVKDDIADQCQTTVRLEDNFIDLAFEMGPVNG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           + A   ++Y+++IA+ R  Q+GL+P++   E+P PW++ +++  +  NFFETR TEY + 
Sbjct: 248 MTAKDIKKYIRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANFFETRATEYSKA 307

Query: 120 A 120
           A
Sbjct: 308 A 308


>gi|328771482|gb|EGF81522.1| hypothetical protein BATDEDRAFT_16297 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 336

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +         K      + ++HEA  +E  ++ E++P   +G+N
Sbjct: 210 RDEGLHTDFACLLFTLLN-------NKPTDSVIQQIIHEAVTIEQEFSTESLPVALIGMN 262

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A   +QY++F+A+R   ++G+ P      NPF +M ++I L+ + NFFE RV EYQ+  
Sbjct: 263 ANLMKQYIEFVADRLFIELGM-PKKYGVGNPFDFM-DMISLQGKTNFFEKRVGEYQKSG 319


>gi|62637405|ref|YP_227403.1| Ribonucleotide reductase small subunit [Deerpox virus W-848-83]
 gi|115503265|gb|ABI99183.1| ribonucleotide reductase small subunit [Deerpox virus W-848-83]
          Length = 321

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  Q+ +  P         +   ++ EA  +E ++  + +P   +G+N
Sbjct: 196 RDEGLHCDFACLMFKQL-LYPPS------TSRIINIIVEAVSIEKSFLTKALPVKLIGMN 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G   +FK +ENPF +M E I L+ + NFFE RV++YQ+
Sbjct: 249 CELMCQYIEFVADRLLSELGCNKIFK-SENPFDFM-ESISLEGKTNFFEKRVSDYQK 303


>gi|86132508|ref|ZP_01051102.1| ribonucleoside-diphosphate reductase small chain [Dokdonia
           donghaensis MED134]
 gi|85817069|gb|EAQ38253.1| ribonucleoside-diphosphate reductase small chain [Dokdonia
           donghaensis MED134]
          Length = 328

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 68/122 (55%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F +       + N HL  K  +++   ++  A  +E  +  E++P   +G+N
Sbjct: 198 RDEGVHCDFAV------HLHNHHLVNKVPKERITEIIVNALDIEREFITESLPVSLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++++ +R   ++  E ++  T NPF +M ++I L+ + NFFE RV EYQ+   
Sbjct: 252 SNLMTQYLEYVTDRLLTELDCEKVYN-TANPFDFM-DMISLQGKTNFFEKRVGEYQKAGV 309

Query: 122 LK 123
           +K
Sbjct: 310 VK 311


>gi|85109237|ref|XP_962820.1| ribonucleoside-diphosphate reductase M2 subunit [Neurospora crassa
           OR74A]
 gi|30316285|sp|Q9C167|RIR2_NEUCR RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|16273691|gb|AAK14804.2| small subunit of ribonucleotide reductase [Neurospora crassa]
 gi|28924456|gb|EAA33584.1| ribonucleoside-diphosphate reductase M2 subunit [Neurospora crassa
           OR74A]
          Length = 410

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q  + ++ +A  +E  +  E +P   +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLNNRPSKQLIQEIIVDAVRIEQEFLTEALPCALLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A   +QY++F+A+R    +G E +++ T NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 325 ADLMKQYIEFVADRLLVALGNEKIYRST-NPFDFM-ENISLGGKTNFFEKRVGDYQKAG 381


>gi|294877483|ref|XP_002768004.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239870142|gb|EER00722.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 247

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 64/112 (57%), Gaps = 8/112 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +FG  + N +K      +T+  +++   ++  A  +E  +  + +P G +G+N
Sbjct: 120 RDEGLHTDFGCLLYNMLK------FTRLPEERVEDIVRSAVNVEREFITDALPVGLIGMN 173

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 113
           A    +Y++F+A+R    +G   ++  + NPF WM+ +I L+ + NFFE RV
Sbjct: 174 AELMGRYIEFVADRLLVALGYAKIYN-SANPFDWMT-MISLQGKTNFFEKRV 223


>gi|72008642|ref|XP_780110.1| PREDICTED: similar to ribonucleotide reductase protein R2 class I
           isoform 1 [Strongylocentrotus purpuratus]
 gi|115928579|ref|XP_001179668.1| PREDICTED: similar to ribonucleotide reductase protein R2 class I
           [Strongylocentrotus purpuratus]
          Length = 412

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  ++  + ++ EA  +E  +  + +P   +G+N
Sbjct: 282 RDEGLHCDFACLMFK-------HLNNKPDEEHVQGIIKEAVAIEQEFLTDALPCSLIGMN 334

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           A   ++Y++F+A+R   ++G   ++K  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 335 AVLMKRYIEFVADRLLVELGCGKIWK-VENPFDFM-ENISLEGKTNFFEKRVGEYQK 389


>gi|225849393|ref|YP_002729557.1| ribonucleoside-diphosphate reductase subunit beta
           [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644764|gb|ACN99814.1| ribonucleoside-diphosphate reductase, beta subunit
           [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 326

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 3/116 (2%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60
           DESLHL  GI+ I  +  ENP +     F +  R  + +A  LE+ Y         + G+
Sbjct: 209 DESLHLQNGIEAILTMVEENPEIVDDYNFVENIRQSIIDAVELELNYLKTKFGGTTIFGV 268

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
           +    E+YM++IA+RR  ++G +P F   +NP  ++ +  D+KK  NFFE   TEY
Sbjct: 269 SYNELERYMKYIADRRLVELGFDPQFGIDQNPLKFLQKE-DVKKLTNFFEVSSTEY 323


>gi|195401438|ref|XP_002059320.1| GJ18335 [Drosophila virilis]
 gi|194142326|gb|EDW58732.1| GJ18335 [Drosophila virilis]
          Length = 394

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +         HL  +  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 269 RDEGLHCDFAVLMFQ-------HLVQRPCRERIIEIISDAVTIEQEFLTDALPVNLIGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                +Y++F+A+R   ++G+  L+  T+NPF +M E+I L  + NFFE +V EYQ+
Sbjct: 322 CALMSEYIEFVADRLLVELGVGKLYN-TKNPFTFM-EMISLDGKTNFFEKKVGEYQR 376


>gi|210616053|ref|ZP_03290925.1| hypothetical protein CLONEX_03144 [Clostridium nexile DSM 1787]
 gi|210149961|gb|EEA80970.1| hypothetical protein CLONEX_03144 [Clostridium nexile DSM 1787]
          Length = 355

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ ++K E P L+T+++  + R+M+ E    EI + H  +     GLN
Sbjct: 227 RDENTHLWLFRNILIELKKEQPDLFTEQYIDEYRSMIKEGCEQEIKWGHYVIGDDVQGLN 286

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y+Q++ N RC  +G  P+++  E       W+S+  +    K +FFE R T Y 
Sbjct: 287 REMITDYVQYLGNLRCTNLGFAPIYEGHETEPESMRWVSQYSNANAIKTDFFEARSTAYA 346

Query: 118 QGAEL 122
           + + L
Sbjct: 347 KSSAL 351


>gi|325286576|ref|YP_004262366.1| Ribonucleoside-diphosphate reductase [Cellulophaga lytica DSM 7489]
 gi|324322030|gb|ADY29495.1| Ribonucleoside-diphosphate reductase [Cellulophaga lytica DSM 7489]
          Length = 328

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 67/119 (56%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H ++ +       + N HL  K  +++   +L +A  +E  +  E++P   +G+N
Sbjct: 199 RDEGMHCDYAV------HLHNHHLINKVPKERITEILVDALDIEREFITESLPVSLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+ +R   ++  + ++  T NPF +M ++I L+ + NFFE RV EYQ+  
Sbjct: 253 SKLMTQYLEFVTDRLLVELNCDKVYNST-NPFDFM-DMISLQGKTNFFEKRVAEYQKSG 309


>gi|302783485|ref|XP_002973515.1| hypothetical protein SELMODRAFT_173451 [Selaginella moellendorffii]
 gi|302787555|ref|XP_002975547.1| hypothetical protein SELMODRAFT_175019 [Selaginella moellendorffii]
 gi|300156548|gb|EFJ23176.1| hypothetical protein SELMODRAFT_175019 [Selaginella moellendorffii]
 gi|300158553|gb|EFJ25175.1| hypothetical protein SELMODRAFT_173451 [Selaginella moellendorffii]
          Length = 347

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + + +       K  +++ + ++ +A  +E  +  E +    VG+N
Sbjct: 217 RDEGLHCDFACLLYSLLNV-------KLDEKRVKEIVSDAVEIERQFVCEALSCDLVGMN 269

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY+ F+A+R    +G   LF    NPF WM ++I L+ + NFFE RV EYQ+ +
Sbjct: 270 ARLMSQYIDFVADRLMVVLGYNKLFNAI-NPFDWM-DLISLQGKTNFFEKRVGEYQKAS 326


>gi|188588149|ref|YP_001919720.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           botulinum E3 str. Alaska E43]
 gi|251778737|ref|ZP_04821657.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|188498430|gb|ACD51566.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum E3 str. Alaska E43]
 gi|243083052|gb|EES48942.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 344

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 66/123 (53%), Gaps = 2/123 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ ENP  +T + + + + M+      EI + H  +     G+N
Sbjct: 218 RDENTHLWLFRNIIKELQSENPESFTTDLKNELKEMMRIGVENEILWGHYVIGDKIQGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E Y++++ N+R  +IGL  LF+ + ENP  W+  V +    K +FFE + T Y + 
Sbjct: 278 KKLIEDYIKYLGNKRLKEIGLGMLFEGFEENPATWVDVVANSNSVKTDFFEAKSTAYAKV 337

Query: 120 AEL 122
           + L
Sbjct: 338 STL 340


>gi|119360103|gb|ABL66780.1| At5g40942 [Arabidopsis thaliana]
          Length = 231

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 6/108 (5%)

Query: 17  QIKIENPH----LWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFI 72
           QI IEN H    L TK  + + + ++ +A  +E  +  + +    VG+N     QY++F+
Sbjct: 103 QIAIENIHSEILLRTKFDEDRLKAIVCDAVEIEREFVCDALSCALVGMNRELMSQYIEFV 162

Query: 73  ANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A+R    +G   ++  T NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 163 ADRLLAALGCGKVYGVT-NPFDWM-ELISLQGKTNFFEKRVGEYQKAS 208


>gi|195333568|ref|XP_002033462.1| GM20395 [Drosophila sechellia]
 gi|195582581|ref|XP_002081105.1| GD25870 [Drosophila simulans]
 gi|194125432|gb|EDW47475.1| GM20395 [Drosophila sechellia]
 gi|194193114|gb|EDX06690.1| GD25870 [Drosophila simulans]
          Length = 393

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +         HL  +  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFFE +V EYQ+
Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVAEYQR 375


>gi|227501022|ref|ZP_03931071.1| ribonucleoside-diphosphate reductase [Anaerococcus tetradius ATCC
           35098]
 gi|227216795|gb|EEI82193.1| ribonucleoside-diphosphate reductase [Anaerococcus tetradius ATCC
           35098]
          Length = 352

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 4/123 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +IN +K E   L+  E Q   R ML E    EIA+    +     GLN
Sbjct: 224 RDENTHLWLFRSLINDLKKEREDLFVPELQNYYRNMLKEGVEQEIAWGKYAIGNEIAGLN 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y++++ N R   +GLE L++ + E P    W+ E  D    K +FFE +VT Y 
Sbjct: 284 EKMIEDYIKYLGNLRAKGLGLEALYEGFDEIPESMKWVDEYSDPNGVKTDFFEAKVTAYS 343

Query: 118 QGA 120
           + +
Sbjct: 344 KSS 346


>gi|237749822|ref|ZP_04580302.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           bilis ATCC 43879]
 gi|229374572|gb|EEO24963.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           bilis ATCC 43879]
          Length = 351

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL     +I   + E P L+T+  Q +   M  +A  LE ++         +GL 
Sbjct: 226 RDEITHLTIFQQMIISTRKERPDLFTQALQDEVMEMFRQAVDLESSWGEYITQGQILGLT 285

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           A    QY++++A++R   +   P+   T+NP  W+ E ++   ++ NFFE +V  Y +G 
Sbjct: 286 AKIIRQYIEYLADKRLKAVDY-PILYNTQNPIQWVDEQVNFNNQRTNFFEAKVRNYTRG- 343

Query: 121 ELKWD 125
           ELK++
Sbjct: 344 ELKFE 348


>gi|294013210|ref|YP_003546670.1| ribonucleoside-diphosphate reductase beta chain [Sphingobium
           japonicum UT26S]
 gi|292676540|dbj|BAI98058.1| ribonucleoside-diphosphate reductase beta chain [Sphingobium
           japonicum UT26S]
          Length = 351

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDE+LH   GI  +    ++     T   +     M  +   +E A+       G V G
Sbjct: 189 VRDETLHCE-GIVRLFHAFVKERDCLTASVKDDIMDMCQKTVRIEDAFVDLVFEMGPVPG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     ++Y+++IA+ R  Q+GL+P++   E+P PW++ +++  +  NFFETR TEY + 
Sbjct: 248 MTPKDIKKYVRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANFFETRATEYSKA 307

Query: 120 A 120
           A
Sbjct: 308 A 308


>gi|195172750|ref|XP_002027159.1| GL20023 [Drosophila persimilis]
 gi|198459455|ref|XP_001361381.2| GA21447 [Drosophila pseudoobscura pseudoobscura]
 gi|194112972|gb|EDW35015.1| GL20023 [Drosophila persimilis]
 gi|198136695|gb|EAL25959.2| GA21447 [Drosophila pseudoobscura pseudoobscura]
          Length = 391

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 67/117 (57%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + + +       HL  +  +++   ++ +A  +E  +  E +P   +G+N
Sbjct: 266 RDEGLHCDFAVLMYH-------HLVQRPKRERIIEIIRDAVEIEQEFLTEALPVNLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFFE +V EYQ+
Sbjct: 319 CVLMSQYIEFVADRLLGELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVAEYQR 373


>gi|17551968|ref|NP_497821.1| RiboNucleotide Reductase family member (rnr-2) [Caenorhabditis
           elegans]
 gi|1172941|sp|P42170|RIR2_CAEEL RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|3873950|emb|CAA84688.1| C. elegans protein C03C10.3, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 381

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 67/117 (57%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + ++++        K  QQ+   ++ +A  +E  +  E +P   +G+N
Sbjct: 256 RDEGLHRDFACLLYSKLQ-------KKLTQQRIYDIIKDAVAIEQEFLTEALPVDMIGMN 308

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+    ++G + L+K ++NPF +M E I +  + NFFE RV+EYQ+
Sbjct: 309 CRLMSQYIEFVADHLLVELGCDKLYK-SKNPFDFM-ENISIDGKTNFFEKRVSEYQR 363


>gi|190896512|gb|ACE96769.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896530|gb|ACE96778.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFFEKRVGEY 223


>gi|190896528|gb|ACE96777.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFFEKRVGEY 223


>gi|211956300|ref|YP_002302368.1| ribonucleotide reductase small subunit [Deerpox virus W-1170-84]
 gi|115503095|gb|ABI99013.1| ribonucleotide reductase small subunit [Deerpox virus W-1170-84]
          Length = 321

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  Q+ +  P+        +   ++ EA  +E ++    +P   +G+N
Sbjct: 196 RDEGLHCDFACLMFKQL-LHPPN------PSRIINIIVEAVSIEKSFLTTALPVKLIGMN 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G   +FK +ENPF +M E I L+ + NFFE RV++YQ+
Sbjct: 249 CELMCQYIEFVADRLLSELGCTKIFK-SENPFDFM-ESISLEGKTNFFEKRVSDYQK 303


>gi|27923845|sp|Q9QTF2|RIR2_RSIV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|5688956|dbj|BAA82755.1| ribonucleotide reductase small subunit [Red sea bream iridovirus]
 gi|327396894|dbj|BAK14260.1| ribonucleotide diphosphate reductase small subunit [Red sea bream
           iridovirus]
          Length = 312

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  Q+         K  Q  +  ++ +A  +E A+  E +    +G+N
Sbjct: 188 RDEGLHCDFACMLFRQMA-------NKPCQDDAHQIISDAVDIETAFFREALKTPLLGMN 240

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           + S + Y+QF+A+R    +G   ++  + NPF +M   I ++ + NFFE RV+EYQ+
Sbjct: 241 SDSMKLYIQFVADRLLDALGYAKMYNVS-NPFDFMDN-ISIEGKTNFFERRVSEYQR 295


>gi|190896544|gb|ACE96785.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFFEKRVGEY 223


>gi|239502693|ref|ZP_04662003.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB900]
          Length = 309

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 7/125 (5%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           +E  HL+    +++ ++ EN  ++T+ F  K+  +   ++ +EI++  + + KG    N 
Sbjct: 189 EEGTHLDLFAHMLDTLRHENKDVFTQSFWNKALEVFLTSSEMEISWG-KYITKGVT--NP 245

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
            + E Y++ +AN R  QI   P   Y   +NPFPW+ +       EKNFFETRVT+Y+ G
Sbjct: 246 KAIEDYIKHLANLRAEQIQ-APFVPYPGVKNPFPWVEQFSKPNTSEKNFFETRVTDYKVG 304

Query: 120 AELKW 124
             L W
Sbjct: 305 GALVW 309


>gi|190896536|gb|ACE96781.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896560|gb|ACE96793.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896566|gb|ACE96796.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFFEKRVGEY 223


>gi|301097698|ref|XP_002897943.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
           infestans T30-4]
 gi|262106388|gb|EEY64440.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
           infestans T30-4]
          Length = 360

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + +++  + P       + +   ++ +A  +E  +  +++P   +G+N
Sbjct: 235 RDEGMHTDFACLMYSKLVNKLP-------ESRVHEIIRDAVAIEHEFVCDSLPVELIGMN 287

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R  + +G+  ++   +NPF WM ++I L+ + NFFE RV EY +  
Sbjct: 288 SALMCQYIEFVADRLLYSLGVSKIYN-VKNPFDWM-DMISLQGKTNFFEKRVGEYSKAG 344


>gi|190896524|gb|ACE96775.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896534|gb|ACE96780.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFFEKRVGEY 223


>gi|4836362|gb|AAD30422.1|AF117061_1 ribonucleotide reductase R2 subunit [Aedes albopictus]
          Length = 398

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  Q++   ++ EA L+E  +  + +P   +G+N
Sbjct: 273 RDEGLHTDFACLMFK-------YLVQKPSQERVIEIIREAVLIEQEFLTKALPVDLLGMN 325

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F A+R   ++G++ ++  T+NPF +M E I L+ + NFFE +V EYQ+
Sbjct: 326 CELMSQYIEFEADRLLLELGIDKIYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQK 380


>gi|292658982|gb|ADE34370.1| ribonucleotide reductase small chain [Turbot reddish body
           iridovirus]
          Length = 312

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  Q+         K  Q+ +  ++ +A  +E A+  E +    +G+N
Sbjct: 188 RDEGLHCDFACMLFRQMA-------NKPSQEDAHQIISDAVDIETAFFREALKTPLLGMN 240

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           + S   Y+QF+A+R    +G   ++    NPF +M   I ++ + NFFE RV+EYQ+
Sbjct: 241 SDSMRLYIQFVADRLLDALGYAKMYN-VANPFDFMDN-ISIEGKTNFFERRVSEYQR 295


>gi|328872436|gb|EGG20803.1| ribonucleotide reductase small subunit [Dictyostelium fasciculatum]
          Length = 335

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N++   N  L  K  +    +++ +A   E  +  +++P   +G+N
Sbjct: 201 RDEGLHCDFACLLYNKL---NNKLDVKTIE----SIIRDAVECEKEFVTDSLPVDLIGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    +Y++F A+R    +G + ++  + NPF WM E+I L ++ NFFE +V+EY +   
Sbjct: 254 SREMSKYIEFCADRLLVSLGYKKIYN-SANPFDWM-EMISLMRKANFFEGKVSEYAKAGV 311

Query: 122 LK 123
            K
Sbjct: 312 AK 313


>gi|156058956|ref|XP_001595401.1| hypothetical protein SS1G_03490 [Sclerotinia sclerotiorum 1980]
 gi|154701277|gb|EDO01016.1| hypothetical protein SS1G_03490 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 407

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q  + ++ EA  +E  +  E +P   +G+N
Sbjct: 266 RDEGLHTDFACLLFS-------HLKHRPSKQAVQDVITEAVEIEQEFLTEALPCALLGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +   +QY++F+A+R    +G + ++K + NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 319 STLMKQYIEFVADRLLVTLGNDKVYK-SANPFDFM-ENISLAGKTNFFEKRVGDYQKAG 375


>gi|307295356|ref|ZP_07575195.1| Ribonucleoside-diphosphate reductase [Sphingobium chlorophenolicum
           L-1]
 gi|306878859|gb|EFN10078.1| Ribonucleoside-diphosphate reductase [Sphingobium chlorophenolicum
           L-1]
          Length = 351

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDE+LH   GI  +    ++     T   +     M  +   +E A+       G V G
Sbjct: 189 VRDETLHCE-GIIRLFHAFVKERDCLTASVKDDIMDMCQKTVRIEDAFIDLVFEMGPVPG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     ++Y+++IA+ R  Q+GL+P++   E+P PW++ +++  +  NFFETR TEY + 
Sbjct: 248 MTPKDIKKYVRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANFFETRATEYSKA 307

Query: 120 A 120
           A
Sbjct: 308 A 308


>gi|110636874|ref|YP_677081.1| ribonucleoside-diphosphate reductase 1 subunit beta [Cytophaga
           hutchinsonii ATCC 33406]
 gi|110279555|gb|ABG57741.1| ribonucleoside-diphosphate reductase 1, beta subunit [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 324

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 67/119 (56%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  +      ++  K   ++   ++ EA  +E  +  +++P   +G+N
Sbjct: 198 RDEGLHCDFACLLYTK------YINNKLPAERVIQIILEAVEIEKEFVTDSLPVDLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A   +QY++F+A+R    +G+   F  T NPF +M E+I L+ + NFFE RV+EYQ+  
Sbjct: 252 ARLMQQYIEFVADRLLVALGVPKQFNAT-NPFDFM-EMISLQGKTNFFEKRVSEYQKSG 308


>gi|297818266|ref|XP_002877016.1| hypothetical protein ARALYDRAFT_484491 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322854|gb|EFH53275.1| hypothetical protein ARALYDRAFT_484491 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 329

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K +         +++ ++++ +A  +E  +  + +P   VG+N
Sbjct: 198 RDEGLHCDFACLLYTLLKTKLS-------EERVKSIVCDAVEIEREFVCDALPCALVGMN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G   ++  T NPF WM E+I L+ + NFFE RV +YQ+ +
Sbjct: 251 RDLMSQYIEFVADRLLGALGYGKVYGVT-NPFDWM-ELISLQGKTNFFEKRVGDYQKAS 307


>gi|331086748|ref|ZP_08335825.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 9_1_43BFAA]
 gi|330409914|gb|EGG89349.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 9_1_43BFAA]
          Length = 347

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 67/125 (53%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ +++ E P L+++E +++ R M+ E    EIA+ H  +     GL+
Sbjct: 219 RDENTHLWLFTNILRELRKELPELFSEEKEKEYRQMIREGCEQEIAWGHYVIGDAVSGLS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N RC  +GL P+++  E       W+S+  +    K +FFE + T Y 
Sbjct: 279 CDMITDYVKYLGNLRCKNLGLAPIYEGHEKEPESMGWVSQFSNANMIKTDFFEAKSTAYA 338

Query: 118 QGAEL 122
           + + L
Sbjct: 339 KSSAL 343


>gi|87198296|ref|YP_495553.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium
           aromaticivorans DSM 12444]
 gi|87133977|gb|ABD24719.1| Ribonucleoside-diphosphate reductase [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 351

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 66/121 (54%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH   GI  +    ++     TK  ++       +   LE A+      +G V G
Sbjct: 189 VRDESLHCE-GITRLFHAFVKERGCLTKAVKEDIIDCCQKTVRLEDAFIDLAFEQGPVPG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           ++A   ++Y+++IA+ R  Q+GL  ++   ++P PW++ +++  +  NFFETR TEY + 
Sbjct: 248 MSAKEIKRYIRYIADWRLSQLGLPAIYMIEDHPLPWLAPLLNGVEHANFFETRATEYSKA 307

Query: 120 A 120
           A
Sbjct: 308 A 308


>gi|195485577|ref|XP_002091148.1| GE13485 [Drosophila yakuba]
 gi|194177249|gb|EDW90860.1| GE13485 [Drosophila yakuba]
          Length = 393

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +         HL  +  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFFE +V EYQ+
Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVGEYQR 375


>gi|116191729|ref|XP_001221677.1| hypothetical protein CHGG_05582 [Chaetomium globosum CBS 148.51]
 gi|88181495|gb|EAQ88963.1| hypothetical protein CHGG_05582 [Chaetomium globosum CBS 148.51]
          Length = 409

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q    ++ +A  +E  +  E +P   +G+N
Sbjct: 271 RDEGLHTDFACLLFS-------HLNNRPSKQIIEDIIVDAVRIEQEFLTEALPCALLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +   +QY++F+A+R    +G E +++ T NPF +M E I L  + NFFE RV EYQ+  
Sbjct: 324 SNLMKQYIEFVADRLLVALGNEKVYRST-NPFDFM-ENISLGGKTNFFEKRVGEYQKAG 380


>gi|325663145|ref|ZP_08151595.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 4_1_37FAA]
 gi|325470599|gb|EGC73829.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 4_1_37FAA]
          Length = 347

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 67/125 (53%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ +++ E P L+++E +++ R M+ E    EIA+ H  +     GL+
Sbjct: 219 RDENTHLWLFTNILRELRKELPELFSEEKEKEYRQMIREGCEQEIAWGHYVIGDAVSGLS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N RC  +GL P+++  E       W+S+  +    K +FFE + T Y 
Sbjct: 279 CDMITDYVKYLGNLRCKNLGLAPIYEGHEKEPESMGWVSQFSNANMIKTDFFEAKSTAYA 338

Query: 118 QGAEL 122
           + + L
Sbjct: 339 KSSAL 343


>gi|18079279|ref|NP_525111.1| ribonucleoside diphosphate reductase small subunit [Drosophila
           melanogaster]
 gi|12644287|sp|P48592|RIR2_DROME RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|10727628|gb|AAF58599.2| ribonucleoside diphosphate reductase small subunit [Drosophila
           melanogaster]
 gi|15292183|gb|AAK93360.1| LD41588p [Drosophila melanogaster]
 gi|220946286|gb|ACL85686.1| CG8975-PA [synthetic construct]
 gi|220955972|gb|ACL90529.1| RnrS-PA [synthetic construct]
          Length = 393

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +         HL  +  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFFE +V EYQ+
Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVGEYQR 375


>gi|194883840|ref|XP_001976005.1| GG22616 [Drosophila erecta]
 gi|190659192|gb|EDV56405.1| GG22616 [Drosophila erecta]
          Length = 393

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +         HL  +   ++   ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHCDFAVLMFQ-------HLVQRPKHERIIEIIRDAVAIEQEFLTDALPVNLIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFFE +V EYQ+
Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVAEYQR 375


>gi|269105083|ref|ZP_06157778.1| ribonucleotide reductase 2 [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268160718|gb|EEZ39216.1| ribonucleotide reductase 2 [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 310

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 16/129 (12%)

Query: 2   RDESLHLNFG---IDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
           RDE LH +F       + Q K+          QQ+   +  EA  +E  +  E +P   +
Sbjct: 190 RDEGLHFSFSALLFKTLGQGKVT---------QQEFEEICREAVSIEKEFVTEALPVDLI 240

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ- 117
           G+NA    QY++  A+      G +P+F Y +NPF +M  ++D++ + NFFE RVTEY+ 
Sbjct: 241 GMNAELMCQYIEHTADVIAGLFGFDPIF-YAKNPFDYM-RLLDMEGKTNFFEKRVTEYKR 298

Query: 118 -QGAELKWD 125
            Q  +L +D
Sbjct: 299 PQDRQLSFD 307


>gi|50311465|ref|XP_455757.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644893|emb|CAG98465.1| KLLA0F15103p [Kluyveromyces lactis]
          Length = 401

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE LH +F   +   +K + NP +  K        ++ EA  +E  Y  + +P   +G+
Sbjct: 271 RDEGLHTDFACLLFAHLKNKPNPEIVEK--------IITEAVEIEKRYFMDALPVSLLGM 322

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    QY++F+A+R    +G +  F  T NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 323 NADLMNQYVEFVADRLLVALGNKKYFNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380


>gi|15232077|ref|NP_189342.1| TSO2 (TSO meaning 'ugly' in Chinese); oxidoreductase/
           ribonucleoside-diphosphate reductase/ transition metal
           ion binding [Arabidopsis thaliana]
 gi|75273949|sp|Q9LSD0|RIR2C_ARATH RecName: Full=Ribonucleoside-diphosphate reductase small chain C;
           AltName: Full=Ribonucleoside-diphosphate reductase TSO2
           subunit; AltName: Full=Ribonucleotide reductase small
           subunit C
 gi|9279629|dbj|BAB01087.1| ribonucleotide reductase [Arabidopsis thaliana]
 gi|17380726|gb|AAL36193.1| putative ribonucleotide reductase small subunit [Arabidopsis
           thaliana]
 gi|21436297|gb|AAM51287.1| putative ribonucleotide reductase small subunit [Arabidopsis
           thaliana]
 gi|332643740|gb|AEE77261.1| Ribonucleoside-diphosphate reductase small chain C [Arabidopsis
           thaliana]
          Length = 332

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K +         +++ ++++ +A  +E  +  + +P   VG+N
Sbjct: 201 RDEGLHCDFACLLYTLLKTKLS-------EERVKSIVCDAVEIEREFVCDALPCALVGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G   ++  T NPF WM E+I L+ + NFFE RV +YQ+ + 
Sbjct: 254 RDLMSQYIEFVADRLLGALGYGKVYGVT-NPFDWM-ELISLQGKTNFFEKRVGDYQKASV 311

Query: 122 LK 123
           + 
Sbjct: 312 MS 313


>gi|322510501|gb|ADX05815.1| putative ribonucleotide reductase small subunit [Organic Lake
           phycodnavirus 1]
          Length = 324

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 74/116 (63%), Gaps = 9/116 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+LH  F + + ++++        K  ++K R ++ EA ++E  +  E++P   +G+N
Sbjct: 201 RDEALHTEFAVHLFHKLE-------KKINKKKIREIIEEAVVIEKEFIVESLPCRLIGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
           +    QY++++A+R   Q+G E +++ T NPF +M E+I L+++ NFFE+RV+EY 
Sbjct: 254 SDLMTQYIEYVADRLMIQLGCEEIYR-TNNPFDFM-ELISLEQKTNFFESRVSEYS 307


>gi|157939640|ref|YP_001497012.1| ribonucleotide reductase [Tanapox virus]
 gi|146746356|gb|ABQ43492.1| ribonucleotide reductase [Tanapox virus]
 gi|146746512|gb|ABQ43647.1| ribonucleotide reductase [Tanapox virus]
          Length = 325

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         I   HL         R ++ EA  +E  +  E +P   +G+N
Sbjct: 200 RDEGLHCDFAC-------IMFKHLLNPPLNSVVRDIIIEAVNIEKNFLTEAIPVKLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G    +  ++NPF +M E I L+ + NFFE RV+EYQ+
Sbjct: 253 CDLMKQYIEFVADRLLLELGCNKYY-CSKNPFDFM-ENISLEGKTNFFEKRVSEYQK 307


>gi|332876813|ref|ZP_08444570.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
           sp. oral taxon 329 str. F0087]
 gi|332685239|gb|EGJ58079.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
           sp. oral taxon 329 str. F0087]
          Length = 324

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 8/117 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +   HL  K  ++  R ++ +A  +E  +  + +P   +G+N
Sbjct: 197 RDEGLHCDFAC------LLYVNHLQNKLSEETIREIIVDAVAIEKEFVTDALPVKLIGMN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           A    QY++F+A+R    +G   ++  T NPF +M E+I L+ + NFFE RV EYQ+
Sbjct: 251 AELMCQYIEFVADRLLVALGCNKVWNAT-NPFDFM-ELISLQGKTNFFERRVGEYQK 305


>gi|325953830|ref|YP_004237490.1| ribonucleoside-diphosphate reductase [Weeksella virosa DSM 16922]
 gi|323436448|gb|ADX66912.1| Ribonucleoside-diphosphate reductase [Weeksella virosa DSM 16922]
          Length = 323

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 68/120 (56%), Gaps = 10/120 (8%)

Query: 2   RDESLHLNFG-IDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE LH +F  +  +N +K + P       ++  + ++ +A  +E  +  E +P   +G+
Sbjct: 196 RDEGLHCDFACLLYVNHLKNKLP-------EETVQKIIADAVEVEKEFVTEALPVRLIGM 248

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    QY++F+A+R    +G + ++  T NPF +M E+I L+ + NFFE RV EYQ+  
Sbjct: 249 NAELMCQYIEFVADRLLDALGCKKVWNAT-NPFDFM-ELISLQGKTNFFERRVGEYQKSG 306


>gi|212697417|ref|ZP_03305545.1| hypothetical protein ANHYDRO_01987 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325846383|ref|ZP_08169352.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
 gi|212675609|gb|EEB35216.1| hypothetical protein ANHYDRO_01987 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325481567|gb|EGC84607.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
          Length = 352

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +IN +K E P L+T E ++   ++L E    EIA+    +     GLN
Sbjct: 224 RDENTHLWLFRSMINDLKEERPDLFTDELKEFYLSLLKEGVEQEIAWGKYAIGDEIQGLN 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
           +   E Y++++ N R   +GL  +++ Y E P    W+SE  D  + K +FFE +V+ Y 
Sbjct: 284 SQMIEDYIKYLGNLRAKGLGLGKIYEGYEEEPQSMKWVSEYSDPNQVKTDFFEGKVSAYS 343

Query: 118 QGAELKWD 125
           + + ++ D
Sbjct: 344 KSSVIEDD 351


>gi|19881429|ref|NP_612246.1| putative ribonucleotide reductase small subunit [Infectious spleen
           and kidney necrosis virus]
 gi|19773634|gb|AAL98748.1|AF371960_24 putative ribonucleotide reductase small subunit [infectious spleen
           and kidney necrosis virus]
          Length = 312

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  Q+         K  Q  +  ++ +A  +E A+  E +    +G+N
Sbjct: 188 RDEGLHCDFACMLFRQMA-------NKPCQDDAHQIISDAVDIETAFFQEALKTPLLGMN 240

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           + S   Y+QF+A+R    +G   ++    NPF +M   I ++ + NFFE RV+EYQ+
Sbjct: 241 SDSMRLYIQFVADRLLDALGYAKMYN-VANPFDFMDN-ISIEGKTNFFERRVSEYQR 295


>gi|74229799|ref|YP_309003.1| ribonucleotide reductase small subunit (rr2) [Trichoplusia ni SNPV]
 gi|72259713|gb|AAZ67484.1| ribonucleotide reductase small subunit (rr2) [Trichoplusia ni SNPV]
          Length = 318

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 6/117 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F     N+   +   L     + K   M  EA  +E  +    +P   +G+N
Sbjct: 194 RDEGLHTDFACLYYNKYIAKEDKLS----ESKVLNMFKEAVDIEKDFFTNALPVAMLGMN 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           A S  +Y++F+A+R   ++G E  FK T NPF +M+  I L+ + NFFE RV EY++
Sbjct: 250 AHSMCEYIEFVADRLLIELGYEKYFK-TLNPFEFMNN-ISLEGKTNFFEKRVGEYKR 304


>gi|94495782|ref|ZP_01302361.1| ribonucleotide reductase beta subunit [Sphingomonas sp. SKA58]
 gi|94424474|gb|EAT09496.1| ribonucleotide reductase beta subunit [Sphingomonas sp. SKA58]
          Length = 350

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDE+LH   GI  +    ++     T   +     M  +   +E A+       G V G
Sbjct: 189 VRDETLHCE-GIVRLFHAFVKERDCLTASVKDDIMDMCQKTVRIEDAFVDLVFEMGPVPG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     ++Y+++IA+ R  Q+GL+P++   E+P PW++ +++  +  NFFETR TEY + 
Sbjct: 248 MTPKDIKKYVRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANFFETRSTEYSKA 307

Query: 120 A 120
           A
Sbjct: 308 A 308


>gi|195027582|ref|XP_001986661.1| GH20400 [Drosophila grimshawi]
 gi|193902661|gb|EDW01528.1| GH20400 [Drosophila grimshawi]
          Length = 393

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +         HL  +  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHCDFAVMMFQ-------HLVQRPSRERIIEIVSDAVTIEQEFLTDALPVNLIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                +Y++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFFE +V EYQ+
Sbjct: 321 CALMSEYIEFVADRLLVELGVGKIYN-TKNPFTFM-EMISLDGKTNFFEKKVGEYQR 375


>gi|190896568|gb|ACE96797.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896580|gb|ACE96803.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEEQVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-AANPFDWM-ELISLQGKTNFFEKRVGEY 223


>gi|138894466|ref|YP_001124919.1| ribonucleoside-diphosphate reductase subunit beta [Geobacillus
           thermodenitrificans NG80-2]
 gi|196247935|ref|ZP_03146637.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. G11MC16]
 gi|134265979|gb|ABO66174.1| Ribonucleoside-diphosphate reductase beta subunit [Geobacillus
           thermodenitrificans NG80-2]
 gi|196212719|gb|EDY07476.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. G11MC16]
          Length = 344

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H++    +  ++  E P   T E    +R+   +A  LEI +A E +     G++
Sbjct: 216 RDEHIHVDLFAKIFKEVLNEYPEYRTPELADFARSTFMKAAELEIEWAGEIIGNDIDGID 275

Query: 62  APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEKNFFETRVTEYQQ 118
               E Y++F AN R HQ+G + P   Y  NP  W+   E +DL K  +FFE +  +Y +
Sbjct: 276 LADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGK-SDFFEQKPRQYTK 334


>gi|148912897|ref|YP_001293211.1| hypothetical protein GTPV_gp017 [Goatpox virus Pellor]
          Length = 321

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K    +          + +++EA  +E  +    +P   +G+N
Sbjct: 196 RDEGLHCDFACLIFKHLKYPPSN-------DIIKIIINEAVSIEKEFLTNIIPVKLIGMN 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++FIA+R   ++G + +F  T NPF +M E I L+ + NFFE RV+EYQ+
Sbjct: 249 CDLMSQYIEFIADRLLLELGCDKVFMST-NPFDFM-ENISLEGKTNFFEKRVSEYQK 303


>gi|190896572|gb|ACE96799.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896574|gb|ACE96800.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896576|gb|ACE96801.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896578|gb|ACE96802.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEEQVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFFEKRVGEY 223


>gi|320536436|ref|ZP_08036471.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           phagedenis F0421]
 gi|320146705|gb|EFW38286.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           phagedenis F0421]
          Length = 363

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L+T E  +  R M+ E    EI + H  +     GLN
Sbjct: 235 RDENTHLWLFRSIIQELQKEEPQLFTPENIEMFRAMIKEGCEQEIKWGHYVIGDDIPGLN 294

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y+Q++ N RC  +G EPL++ + E P    W+S+  +    K +FFE + T Y 
Sbjct: 295 KQMITDYIQYLGNLRCENLGFEPLYEGHREEPASMSWVSQYSNANLIKTDFFEAKSTAYA 354

Query: 118 QGAEL 122
           + + +
Sbjct: 355 KSSAM 359


>gi|190896570|gb|ACE96798.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896582|gb|ACE96804.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEEQVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-AANPFDWM-ELISLQGKTNFFEKRVGEY 223


>gi|308806626|ref|XP_003080624.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
           tauri]
 gi|116059085|emb|CAL54792.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
           tauri]
          Length = 241

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   ++ Q+    P       ++  R ++ EA  +E  +  +++P   VG+N
Sbjct: 113 RDEGLHRDFAC-LLYQMLNNKPD------EEVVRKIVTEAVEIEKEFVCDSLPCALVGMN 165

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A     Y++++A+     +G+ P    T NPF WM E+I L+ + NFFE RV EYQ+  
Sbjct: 166 AGMMSDYIEYVADHLFTSLGM-PKEYNTANPFDWM-ELISLQGKTNFFEKRVGEYQKAG 222


>gi|312381384|gb|EFR27142.1| hypothetical protein AND_06323 [Anopheles darlingi]
          Length = 390

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++   ++ +A ++E  +  + +P   +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------YLVQKPSRKRVTDIIRDAVMIEQEFLTKALPVDMLGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G E ++  T+NPF +M E I L+ + NFFE +V EYQ+
Sbjct: 318 CELMSQYIEFVADRLLVELGCEKVYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQK 372


>gi|255080138|ref|XP_002503649.1| predicted protein [Micromonas sp. RCC299]
 gi|226518916|gb|ACO64907.1| predicted protein [Micromonas sp. RCC299]
          Length = 324

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 13/120 (10%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
           RDE LH +F   + + +K  ++   L         + ++ +A  +E  +  + +    VG
Sbjct: 192 RDEGLHCDFACLLYSMLKHPLDPARL---------QEIVKDAVDIEKEFVCDALSCALVG 242

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +NA    +Y++F+A+R   Q+G+E ++  T NPF WM E+I L+ + NFFE RV +YQ+ 
Sbjct: 243 MNADLMSEYIEFVADRLMTQLGVEKVWN-TPNPFEWM-EMISLQGKANFFEHRVDQYQKA 300


>gi|156839886|ref|XP_001643629.1| hypothetical protein Kpol_478p6 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114248|gb|EDO15771.1| hypothetical protein Kpol_478p6 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 394

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K        ++ EA  +E  Y  + +P   +G+N
Sbjct: 264 RDEGLHTDFASLLFS-------HLDNKPDPAIVEKIVTEAVEIEKRYFIDALPVALLGMN 316

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R     G E  +K  ENPF +M E I L  + NFFE RV++YQ+ +
Sbjct: 317 AKLMNQYVEFVADRLLVSFGNEKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAS 373


>gi|68161126|gb|AAY86994.1| ribonucleotide reductase M2b [Ictalurus punctatus]
          Length = 192

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 64/114 (56%), Gaps = 9/114 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH NF   + +Q++        K    + + ++ +A  +E  +  E +P   +G+N
Sbjct: 88  RDEGLHCNFACLIYSQLQ-------KKPSADRVKDIITKAVRIEQEFLTEALPVDLIGIN 140

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
           +   +QY++F+A+R    +G+  +++  ENPF +M E I L+ + NFFE RV E
Sbjct: 141 SYLMKQYIEFVADRLLTDLGIPKVYE-AENPFDFM-EFISLEGKTNFFEKRVAE 192


>gi|313844096|ref|YP_004061759.1| hypothetical protein OlV1_126 [Ostreococcus lucimarinus virus OlV1]
 gi|312599481|gb|ADQ91503.1| hypothetical protein OlV1_126 [Ostreococcus lucimarinus virus OlV1]
          Length = 408

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 65/115 (56%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F +++   ++I       K   +   +++ EA  +E  +  + +P   +G+N
Sbjct: 287 RDEGLHQEFAVELFKLLRI-------KPTTETIHSIVKEAVEIEKGFILDALPCALIGMN 339

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
           +    +Y++++++R   QIG+ P++  ++NPF +M E I L  + NFFE RV +Y
Sbjct: 340 SEKMSEYIEYVSDRLLKQIGVPPIWN-SKNPFDFM-ENISLDGKTNFFEKRVGDY 392


>gi|294463759|gb|ADE77404.1| unknown [Picea sitchensis]
          Length = 289

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K       +K  +++ + ++ +A  +E  +  E +    VG+N
Sbjct: 160 RDEGLHCDFACLLYSLLK-------SKLSEERVKAIVRDAVDIEREFVCEALSCDLVGMN 212

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++FIA+R    +G   ++ + ENPF WM ++I L+ + NFFE RV +YQ+ +
Sbjct: 213 ATLMSQYIKFIADRLLVALGHGKMY-HVENPFDWM-DLISLQGKTNFFERRVGDYQKAS 269


>gi|85375147|ref|YP_459209.1| ribonucleotide-diphosphate reductase subunit beta [Erythrobacter
           litoralis HTCC2594]
 gi|84788230|gb|ABC64412.1| ribonucleotide reductase beta subunit [Erythrobacter litoralis
           HTCC2594]
          Length = 356

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 67/121 (55%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    + + ++  +     +TK  ++    +  ++  LE  +       G V G
Sbjct: 189 VRDESLHCEGIVRLFHEF-VRERDCYTKAVKEDIIDICQKSVRLEDNFIDLAFEMGPVSG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     ++Y+++IA+ R  Q+GL+P++   ++P PW++ +++  +  NFFE R TEY +G
Sbjct: 248 MTPKEIKKYIRYIADWRLGQLGLQPIYMVDDHPLPWLAPLLNGVEHANFFEQRATEYSKG 307

Query: 120 A 120
           A
Sbjct: 308 A 308


>gi|56551339|ref|YP_162178.1| ribonucleotide-diphosphate reductase subunit beta [Zymomonas
           mobilis subsp. mobilis ZM4]
 gi|241760992|ref|ZP_04759081.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|260753042|ref|YP_003225935.1| ribonucleotide-diphosphate reductase subunit beta [Zymomonas
           mobilis subsp. mobilis NCIMB 11163]
 gi|56542913|gb|AAV89067.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241374611|gb|EER64072.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|258552405|gb|ACV75351.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 345

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH   GI  +     +     TK+ +     +      +E A+       G V G
Sbjct: 189 VRDESLHCE-GIIRLFHTFCQERQCLTKQVKDDILNICQRTVRIEDAFIDLVFEMGPVEG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     ++Y+++IA+ R  Q+GL P++   E+P PW++ +++  +  NFFETR TEY + 
Sbjct: 248 MTPKEIKKYIRYIADWRLGQLGLSPIYMIEEHPLPWLTPLLNGVEHANFFETRSTEYSKA 307

Query: 120 A 120
           A
Sbjct: 308 A 308


>gi|62421216|gb|AAX82336.1| ribonucleotide reductase small chain [Orange-spotted grouper
           iridovirus]
          Length = 312

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  Q+         K  Q  +  ++ +A  +E A+  E +    +G+N
Sbjct: 188 RDEGLHCDFACMLFRQMA-------NKPCQDDAHEIISDAVDIETAFFREALKTPLLGMN 240

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           + S + Y+QF+A+R    +G   ++    NPF +M   I ++ + NFFE RV+EYQ+
Sbjct: 241 SDSMKLYIQFVADRLLDALGYAKMYN-VGNPFDFMDN-ISIEGKTNFFERRVSEYQR 295


>gi|170032272|ref|XP_001844006.1| ribonucleoside-diphosphate reductase small chain [Culex
           quinquefasciatus]
 gi|167872122|gb|EDS35505.1| ribonucleoside-diphosphate reductase small chain [Culex
           quinquefasciatus]
          Length = 391

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++   ++ EA ++E  +  + +P   +G+N
Sbjct: 266 RDEGLHTDFACLMFR-------YLVQKPSKERVLEIIREAVVIEQEFLTKALPVDLLGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G E ++  T+NPF +M E I L+ + NFFE +V EYQ+
Sbjct: 319 CELMSQYIEFVADRLLLELGNEKIYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQK 373


>gi|50237508|gb|AAT71841.1| ribonucleotide reductase small chain [Rock bream iridovirus]
          Length = 312

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  Q+         K  Q  +  ++ +A  +E A+  E +    +G+N
Sbjct: 188 RDEGLHCDFACMLFRQMA-------NKPCQDDAHEIISDAVDIETAFFREALKTPLLGMN 240

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           + S + Y+QF+A+R    +G   ++    NPF +M   I ++ + NFFE RV+EYQ+
Sbjct: 241 SDSMKLYIQFVADRLLDALGYAKMYN-VGNPFDFMDN-ISIEGKTNFFERRVSEYQR 295


>gi|38683666|gb|AAR26843.1| FirrV-1-A19 [Feldmannia irregularis virus a]
          Length = 342

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH    + + N +K   P     +       +  +A  LE  +  E++P   +G+N
Sbjct: 217 RDEGLHAEGSVMIYNHLKHRLPVAVVHD-------IFTDAVALEKEFIRESLPVSLIGIN 269

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A +   Y++++++    ++G   LF  T+NPF WM+ +I ++ + NFFE RV EY +   
Sbjct: 270 ADTMSSYIEYVSDFWIQRLGYPKLFG-TKNPFEWMT-MIGMEGKSNFFEGRVAEYAKAGS 327

Query: 122 L 122
           +
Sbjct: 328 M 328


>gi|9633826|ref|NP_051904.1| gp015L [Rabbit fibroma virus]
 gi|6578545|gb|AAF17899.1|AF170722_17 gp015L [Rabbit fibroma virus]
          Length = 322

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     + ++  ++ EA ++E  +  + +P   +G+N
Sbjct: 198 RDEGLHCDFACLMFK-------HLNHTPSETRATDIIKEAVVIEQQFLTKALPVRLIGIN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G   +F  T NPF +M E I L+ + NFFE RV++YQ+
Sbjct: 251 CDLMCQYIEFVADRLVTELGYSKIFSAT-NPFDFM-ENISLEGKTNFFEKRVSDYQR 305


>gi|254586079|ref|XP_002498607.1| ZYRO0G14388p [Zygosaccharomyces rouxii]
 gi|238941501|emb|CAR29674.1| ZYRO0G14388p [Zygosaccharomyces rouxii]
          Length = 412

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  +        ++ EA  +E  Y  + +P   +G+N
Sbjct: 284 RDEGLHTDFACLLF-------AHLKNRPSPDIVERIITEAVSIEKRYFEDALPVALLGMN 336

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  +  T NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 337 AALMNQYVEFVADRLLVALGNEKYYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 393


>gi|308485547|ref|XP_003104972.1| hypothetical protein CRE_24501 [Caenorhabditis remanei]
 gi|308257293|gb|EFP01246.1| hypothetical protein CRE_24501 [Caenorhabditis remanei]
          Length = 323

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  +I ++ P       ++    ++ EA  +E+ +  + +P   +G+N
Sbjct: 198 RDEGLHRDFACLLFTKI-VDKPS------REIVCEIVDEAVTIELEFLDQALPVNVIGMN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++++A+    ++G E L+ +T NPF +M E I +  + NFFE RV+EYQ+  
Sbjct: 251 YTLMSQYIKYVADHLLEELGFEKLY-HTINPFDFM-ENISIDGKTNFFEKRVSEYQRSG 307


>gi|303272255|ref|XP_003055489.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226463463|gb|EEH60741.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 322

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K    H    E  Q+   ++ +A  +E  +  + +    VG+N
Sbjct: 192 RDEGLHCDFACLLYSMLK----HPLEPERLQE---IVKDAVEIEKEFVCDALSCALVGMN 244

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    +Y++F+A+R   Q+G++ ++  T NPF WM E I L+ + NFFE RV EYQ+  
Sbjct: 245 ADLMSEYIEFVADRLLVQLGVDKVWN-TPNPFDWM-ESISLQGKTNFFERRVGEYQRNG 301


>gi|10432587|dbj|BAB13815.1| ribonucleotide reductase small subunit [Lentinula edodes]
          Length = 418

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + + ++   PH  T E       ++ EA  +E  +  + +P   +G+N
Sbjct: 287 RDEGMHTDFACLLFSHLR-RRPHPDTVE------RIIKEAVAIEQEFLTDALPVSLIGMN 339

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G + L+  T NPF +M ++I L+ + NFFE RV++Y +  
Sbjct: 340 ATLMCQYIEFVADRLLVALGNKKLYNST-NPFDFM-DMISLQGKTNFFEKRVSDYSKAG 396


>gi|327403795|ref|YP_004344633.1| Ribonucleoside-diphosphate reductase [Fluviicola taffensis DSM
           16823]
 gi|327319303|gb|AEA43795.1| Ribonucleoside-diphosphate reductase [Fluviicola taffensis DSM
           16823]
          Length = 324

 Score = 65.1 bits (157), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 67/119 (56%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  +      HL  +  +++ + ++ +A  +E  +  + +P   +G+N
Sbjct: 198 RDEGLHCDFACLLYTK------HLIHQLSKEQVQEIILDAVEIEKEFVTDALPVKLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R   ++G   +F  T NPF +M ++I ++ + NFFE RV EYQ+  
Sbjct: 252 ADLMAQYIEFVADRLLTELGNPKVFN-TTNPFDFM-DMISIQGKTNFFEKRVAEYQKSG 308


>gi|187607401|ref|NP_001119973.1| ribonucleotide reductase M2 B (TP53 inducible) [Xenopus (Silurana)
           tropicalis]
 gi|165971068|gb|AAI58191.1| LOC100144925 protein [Xenopus (Silurana) tropicalis]
          Length = 346

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       +L  K  +++   ++  A  +E  +  E +P   +G+N
Sbjct: 221 RDEGLHTDFACLMFH-------YLVKKPTEERVTEIIVNAVRIEQEFLTEALPVSLIGMN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               + Y++F+A+R   ++G    FK  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 274 CTLMKTYIEFVADRLLVELGCSKAFK-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 330


>gi|302678465|ref|XP_003028915.1| hypothetical protein SCHCODRAFT_83117 [Schizophyllum commune H4-8]
 gi|300102604|gb|EFI94012.1| hypothetical protein SCHCODRAFT_83117 [Schizophyllum commune H4-8]
          Length = 331

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   +   ++   PH          R ++ EA  +E  +  + +P   +G+N
Sbjct: 202 RDEGMHTDFACLLFAHLR-RRPH------PDVVRRIIMEAVTIEQEFLTDALPVSLIGMN 254

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G E ++  T NPF +M ++I L+ + NFFE RV++Y+  A
Sbjct: 255 STLMCQYIEFVADRLLVALGNEKVYNVT-NPFDFM-DMISLQGKTNFFEKRVSDYKMAA 311


>gi|47213105|emb|CAF89525.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 198

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K   Q    ++  A  +E  +  E +P   +G+N
Sbjct: 73  RDEGLHCDFACLMFK-------HLLHKPSAQTVGAIIRNAVEIEQEFLTEALPVKLIGMN 125

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               ++Y++F+A+R   ++G   +++  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 126 CQLMKRYIEFVADRLLLELGFAKIYR-AENPFDFM-ENISLEGKTNFFEKRVGEYQR 180


>gi|195436539|ref|XP_002066225.1| GK22247 [Drosophila willistoni]
 gi|194162310|gb|EDW77211.1| GK22247 [Drosophila willistoni]
          Length = 395

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +         HL  +  +++   ++ +A  +E  +    +P   +G+N
Sbjct: 270 RDEGLHCDFAVLMFQ-------HLVQRPSRERIIEIIRDAVQIEQEFLTVALPVNLIGMN 322

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFFE +V EYQ+
Sbjct: 323 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFSFM-EMISLDGKTNFFEKKVGEYQR 377


>gi|167760514|ref|ZP_02432641.1| hypothetical protein CLOSCI_02888 [Clostridium scindens ATCC 35704]
 gi|167661880|gb|EDS06010.1| hypothetical protein CLOSCI_02888 [Clostridium scindens ATCC 35704]
          Length = 347

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ ++K E P L+T+   ++ R M+ E    EI++ H  +     GLN
Sbjct: 219 RDENTHLWLFRNILLELKKEEPQLFTESRIEEYREMIKEGCQQEISWGHYVIGDDIQGLN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y+Q++ N RC  +G  P+++ + + P    W+S+  +    K +FFE R T Y 
Sbjct: 279 RDMVTDYIQYLGNLRCTNLGFAPIYEGHVKEPDSMSWVSQFSNANMIKTDFFEARSTAYA 338

Query: 118 QGAEL 122
           + + L
Sbjct: 339 KSSAL 343


>gi|154296564|ref|XP_001548712.1| ribonucleotide reductase small subunit [Botryotinia fuckeliana
           B05.10]
 gi|150843273|gb|EDN18466.1| ribonucleotide reductase small subunit [Botryotinia fuckeliana
           B05.10]
          Length = 407

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q  + ++ EA  +E  +  E +P   +G+N
Sbjct: 266 RDEGLHTDFACLLFS-------HLKHRPSKQAVQDVITEAVEIEQEFLTEALPCALLGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +   +QY++F+A+R    +G +  +K + NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 319 SNLMKQYIEFVADRLLLSLGNDKYYK-SANPFDFM-ENISLAGKTNFFEKRVGDYQKAG 375


>gi|323450429|gb|EGB06310.1| hypothetical protein AURANDRAFT_65685 [Aureococcus anophagefferens]
          Length = 349

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + ++++ + P        +    ++ +A  +E  +    +P   +G+N
Sbjct: 224 RDEGMHCDFACLLYSKLRNKLP-------VETINALIGDAVTIEKEFVVSALPVELIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           + +  QY++F A+R    +G   L++ T NPF WM E+I L+ + NFFE RV EY +  
Sbjct: 277 SRTMCQYIEFCADRLLLALGCPKLYEAT-NPFDWM-ELISLQGKTNFFEKRVGEYAKSG 333


>gi|256545921|ref|ZP_05473276.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           vaginalis ATCC 51170]
 gi|256398343|gb|EEU11965.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           vaginalis ATCC 51170]
          Length = 352

 Score = 64.7 bits (156), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +IN +K E P L+T E ++   ++L E    EIA+    +     GLN
Sbjct: 224 RDENTHLWLFRSMINDLKEERPDLFTDELKEFYLSLLKEGVEQEIAWGKYAIGDEIQGLN 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
           +   E Y++++ N R   +GL  +++ Y + P    W+SE  D  + K +FFE +V+ Y 
Sbjct: 284 SQMIEDYIKYLGNLRAKGLGLGTIYEGYEDEPQSMKWVSEYSDPNQVKTDFFEGKVSAYS 343

Query: 118 QGAELKWD 125
           + + ++ D
Sbjct: 344 KSSVIEDD 351


>gi|308184827|ref|YP_003928960.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori SJM180]
 gi|308060747|gb|ADO02643.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori SJM180]
          Length = 341

 Score = 64.7 bits (156), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 64/120 (53%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E+++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEVSWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|283481249|emb|CAZ69365.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
           virus 99B1]
          Length = 325

 Score = 64.7 bits (156), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +   H+  K   +    ++  A  LE  +  E +P   +G+N
Sbjct: 196 RDEGLHTDFAC------MLYRNHIIHKLPYETVLDIITNAVELERLFICEALPVSLIGIN 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A S   Y++F+A+R    +G    +    NPF WM E+I L+ + NFFE RV EYQ+  
Sbjct: 250 AESMSTYIKFVADRLLISLGYAKHYNVV-NPFEWM-ELISLEGKTNFFEKRVGEYQKAG 306


>gi|255323570|ref|ZP_05364700.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           showae RM3277]
 gi|255299284|gb|EET78571.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           showae RM3277]
          Length = 340

 Score = 64.7 bits (156), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+T E + K   M   A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRTERPDLFTPETEAKIYDMFERAGELEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               EQY++++ ++R   IGL+  +    +P  W+ +      +K NFFE +VT Y +G+
Sbjct: 276 DDIIEQYIRYLIDQRLVAIGLKRRYN-VPHPIKWVDDFAKFNDQKSNFFEAKVTNYSKGS 334


>gi|197322443|ref|YP_002154716.1| putative ribonucleotide reductase small subunit [Feldmannia species
           virus]
 gi|197130510|gb|ACH46846.1| putative ribonucleotide reductase small subunit [Feldmannia species
           virus]
          Length = 342

 Score = 64.7 bits (156), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH    + + N +K   P     +       +  +AT +E  +  E +P   +G+N
Sbjct: 217 RDEGLHAEGSVMIYNHLKHRLPVAVVHD-------IFGQATTIEKEFIREALPVSLIGIN 269

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A +   Y+++I++    ++G   LF  ++NPF WM+ +I ++ + NFFE RV EY +   
Sbjct: 270 AGTMSTYIEYISDFWLEKLGYPKLFN-SKNPFEWMT-MIGMEGKSNFFEGRVAEYSKAGS 327

Query: 122 L 122
           +
Sbjct: 328 M 328


>gi|148554425|ref|YP_001262007.1| ribonucleotide-diphosphate reductase subunit beta [Sphingomonas
           wittichii RW1]
 gi|148499615|gb|ABQ67869.1| Ribonucleoside-diphosphate reductase [Sphingomonas wittichii RW1]
          Length = 350

 Score = 64.7 bits (156), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDE+LH   GI  +    ++     T   +     M  +   +E A+       G V G
Sbjct: 189 IRDETLHCE-GIVRLFHAFVKERDCLTASVKDDILDMCQKTVRIEDAFIDLVFEMGPVNG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     ++Y+++IA+ R  Q+GL+P++   ++P PW++ +++  +  NFFETR TEY + 
Sbjct: 248 MTPKDIKKYVRYIADWRLGQLGLKPIYMIEDHPLPWLAPLLNGVEHANFFETRATEYSKA 307

Query: 120 A 120
           A
Sbjct: 308 A 308


>gi|310798394|gb|EFQ33287.1| ribonucleotide reductase [Glomerella graminicola M1.001]
          Length = 413

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q  + ++ +A  +E  +  E +P   +G+N
Sbjct: 275 RDEGLHTDFACLLYS-------HLKNRPSKQVIQDIIVDAVQIEQEFLTEALPCALLGMN 327

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +   +QY++F+A+R    +G + ++K + NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 328 SNLMKQYIEFVADRLLVALGNDKVYK-SSNPFDFM-ENISLGGKTNFFEKRVADYQKAG 384


>gi|73852496|ref|YP_293780.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
           virus 86]
 gi|72415212|emb|CAI65449.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
           virus 86]
          Length = 325

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +   H+  K   +    ++  A  LE  +  E +P   +G+N
Sbjct: 196 RDEGLHTDFAC------MLYRNHIIHKLPYETVLDIITNAVELERLFICEALPVSLIGIN 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A S   Y++F+A+R    +G    +    NPF WM E+I L+ + NFFE RV EYQ+  
Sbjct: 250 AESMSTYIKFVADRLLISLGYAKHYNVV-NPFEWM-ELISLEGKTNFFEKRVGEYQKAG 306


>gi|323452425|gb|EGB08299.1| hypothetical protein AURANDRAFT_59025 [Aureococcus anophagefferens]
          Length = 319

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + ++++        K    +  +++  A  +E ++    +P   +G+N
Sbjct: 194 RDEGLHCDFACLLYSKLR-------KKLSDVQVASIVGAAVDIEKSFVVSALPVELIGMN 246

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           + S  +Y++F A+R   ++G   L+  T NPF WM E+I L+ + NFFE RV EY + 
Sbjct: 247 SKSMCKYIEFCADRLLLELGYSTLYGAT-NPFDWM-ELISLQGKTNFFEKRVGEYAKA 302


>gi|213511642|ref|NP_001133495.1| Ribonucleoside-diphosphate reductase subunit M2 [Salmo salar]
 gi|209154228|gb|ACI33346.1| Ribonucleoside-diphosphate reductase subunit M2 [Salmo salar]
          Length = 387

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  ++    ++  A  +E  +  + +P   +G+N
Sbjct: 262 RDEGLHCDFACLMFK-------HLVHKPSKETVTKLIRNAVEIEQEFLTKALPVKLIGMN 314

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G + +++  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 315 CDLMTQYIEFVADRLMLELGFDKIYR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 369


>gi|319655055|ref|ZP_08009124.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           2_A_57_CT2]
 gi|317393250|gb|EFV74019.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           2_A_57_CT2]
          Length = 345

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H++  + +  +I  ENP L T E  +  +     A  LEI +A + +     G+ 
Sbjct: 217 RDEQIHVDLFVKIFKEILQENPELNTNELSKFVQETFKRAAELEIEWARDVIGSKTEGIL 276

Query: 62  APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEKNFFETRVTEYQQ 118
               E Y++F AN RC+Q+G E P   Y  NP  W+   E +D  K  +FFE +  +Y +
Sbjct: 277 LSDVEAYIKFYANIRCNQLGYERPFEGYRTNPLRWIVAYEQVDHGK-SDFFEQKSRQYTK 335


>gi|163781846|ref|ZP_02176846.1| ribonucleotide reductase beta chain [Hydrogenivirga sp. 128-5-R1-1]
 gi|159883066|gb|EDP76570.1| ribonucleotide reductase beta chain [Hydrogenivirga sp. 128-5-R1-1]
          Length = 350

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+    ++I  ++ E P L++ E ++        A   EI +         +G+N
Sbjct: 226 RDELTHVTLFRNMILNLQKEQPELFSPEIKKWIAEYFRYAIDQEIKWGQYVTQDQILGIN 285

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               ++Y++++ N R  QIGLEPL+ + TENP  W+ +   +   K +FF+ +   Y + 
Sbjct: 286 NQLIDRYIKYLGNLRITQIGLEPLYPEITENPMKWIDDFRKINNTKTDFFQRKPQTYAKA 345

Query: 120 AELKW 124
            ELKW
Sbjct: 346 NELKW 350


>gi|283768723|ref|ZP_06341634.1| ribonucleoside-diphosphate reductase, beta subunit [Bulleidia
           extructa W1219]
 gi|283104509|gb|EFC05882.1| ribonucleoside-diphosphate reductase, beta subunit [Bulleidia
           extructa W1219]
          Length = 348

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ +++ E P L+T    Q  + M+HE    EIA+    +     GLN
Sbjct: 220 RDENTHLWLFRNILLELQKEEPELFTDSNIQMIKDMIHEGVQQEIAWGQYVIGNNIPGLN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
           +   E Y++++ N R   +GL  L++ Y E P    W+ +  D    K +FFE RVT Y 
Sbjct: 280 SQMVEDYIKYLGNTRFATLGLGNLYEGYEEEPETMRWVKQYSDANMVKTDFFEARVTAYA 339

Query: 118 QGAELKWD 125
           + + ++ D
Sbjct: 340 KSSAIEDD 347


>gi|254293199|ref|YP_003059222.1| ribonucleotide-diphosphate reductase subunit beta [Hirschia baltica
           ATCC 49814]
 gi|254041730|gb|ACT58525.1| Ribonucleoside-diphosphate reductase [Hirschia baltica ATCC 49814]
          Length = 345

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    + + +    E   L TK  +            LE  +       G V G
Sbjct: 198 VRDESLHCEGMMKMFHTYAEETGAL-TKTVKDDITDCCQTVVKLEDKFIDLAFEAGEVEG 256

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     + Y+++IA+ R  Q+ L+P++   E+P PW++E+++  +  NFFE R TEY +G
Sbjct: 257 MTPEDIKNYIRYIADWRLKQLKLDPVYGVDEHPIPWLTEILNGVEHANFFEARATEYSKG 316

Query: 120 A 120
           A
Sbjct: 317 A 317


>gi|326437649|gb|EGD83219.1| ribonucleotide reductase M2 B [Salpingoeca sp. ATCC 50818]
          Length = 408

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +  + P       +++   ++ +A  +E  +  E +P   +G+N
Sbjct: 280 RDEGLHCDFACLMFSMLHKKPP-------KERVIGIIMDAVEIEQEFLTEALPVSLLGMN 332

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    +Y++F+++R    +G + ++  T NPFP+M E I ++ + NFFE RV+EYQ+  
Sbjct: 333 STLMREYIEFVSDRLLVSLGYDKVYNAT-NPFPFM-ENISIEGKTNFFERRVSEYQKSG 389


>gi|266623614|ref|ZP_06116549.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           hathewayi DSM 13479]
 gi|288864591|gb|EFC96889.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           hathewayi DSM 13479]
          Length = 346

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T +     R M+ E    EIA+ H  +     GL 
Sbjct: 219 RDENTHLWLFRNMILELKNEEPELFTPDRVDVYREMIKEGCRQEIAWGHYAIGDKVPGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y+Q++ N RC  +G EP+++  E       W+S+  +    K +FFE R T Y 
Sbjct: 279 KDMITDYIQYLGNLRCMSLGFEPIYEGHEKEPESMAWVSQYSNANMIKTDFFEARSTAYA 338

Query: 118 QGAEL 122
           + + L
Sbjct: 339 KSSAL 343


>gi|190896518|gb|ACE96772.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++ Y  NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVY-YVANPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|132628|sp|P20493|RIR2_VACCC RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|335366|gb|AAA48018.1| putative F4L [Vaccinia virus Copenhagen]
          Length = 319

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|284039889|ref|YP_003389819.1| ribonucleoside-diphosphate reductase [Spirosoma linguale DSM 74]
 gi|283819182|gb|ADB41020.1| Ribonucleoside-diphosphate reductase [Spirosoma linguale DSM 74]
          Length = 349

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 8/118 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +   H+  K  + +   ++  A  +E  +  + +P   +G+N
Sbjct: 200 RDEGLHRDFAC------MLYTDHIVNKLPESQIYDIIRNAVEIEQEFVADALPVSLIGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           A   +QY+ F+A+     +GL  ++    NPF +M ++I L+ + NFFE RV EYQ+G
Sbjct: 254 AELMKQYIAFVADHLLVTLGLRKMYN-VANPFDFM-DMISLQGKTNFFEKRVGEYQRG 309


>gi|44971395|gb|AAS49745.1| RPXV032 [Rabbitpox virus]
          Length = 319

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|313115920|ref|ZP_07801347.1| ribonucleoside-diphosphate reductase, beta subunit
           [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310621684|gb|EFQ05212.1| ribonucleoside-diphosphate reductase, beta subunit
           [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 347

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ E P L+T E  Q  R M+ E    EIA+ H  +     GLN
Sbjct: 219 RDENTHLWLFRNIITELQKEQPELFTAESVQALREMMREGVEQEIAWGHYVIGDDIPGLN 278

Query: 62  APSCEQYMQFIANRRCHQIG---LEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N R   +G   L P F+       W+S+  D    K +FFE R T Y 
Sbjct: 279 RQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVKTDFFEARSTAYA 338

Query: 118 QGAEL 122
           +   L
Sbjct: 339 KSTAL 343


>gi|190896526|gb|ACE96776.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++ Y  NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVY-YVANPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|111184227|gb|ABH08147.1| HSPV044 [Horsepox virus]
          Length = 319

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|305665630|ref|YP_003861917.1| putative ribonucleoside-diphosphate reductase small chain
           [Maribacter sp. HTCC2170]
 gi|88710386|gb|EAR02618.1| probable ribonucleoside-diphosphate reductase small chain
           [Maribacter sp. HTCC2170]
          Length = 328

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 69/124 (55%), Gaps = 8/124 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H ++ +       +   H+  K  +++   ++ +A  +E  +  E++P   +G+N
Sbjct: 199 RDEGMHCDYAV------HLHKNHIVNKVTKERITDIIVDALNIEREFITESLPVSLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+ +R   ++  + ++  + NPF +M ++I L+ + NFFE RV+EYQ+   
Sbjct: 253 SKLMTQYLEFVTDRLLVELECDKVYN-SSNPFDFM-DMISLQGKTNFFEKRVSEYQKAGV 310

Query: 122 LKWD 125
           L  D
Sbjct: 311 LNKD 314


>gi|295103295|emb|CBL00839.1| Ribonucleotide reductase, beta subunit [Faecalibacterium
           prausnitzii SL3/3]
          Length = 347

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ E P L+T E  Q  R M+ E    EIA+ H  +     GLN
Sbjct: 219 RDENTHLWLFRNIITELQKEQPELFTAESVQALREMMREGVEQEIAWGHYVIGDDIPGLN 278

Query: 62  APSCEQYMQFIANRRCHQIG---LEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N R   +G   L P F+       W+S+  D    K +FFE R T Y 
Sbjct: 279 RQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVKTDFFEARSTAYA 338

Query: 118 QGAEL 122
           +   L
Sbjct: 339 KSTAL 343


>gi|160942848|ref|ZP_02090088.1| hypothetical protein FAEPRAM212_00325 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445900|gb|EDP22903.1| hypothetical protein FAEPRAM212_00325 [Faecalibacterium prausnitzii
           M21/2]
          Length = 347

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ E P L+T E  Q  R M+ E    EIA+ H  +     GLN
Sbjct: 219 RDENTHLWLFRNIITELQKEQPELFTAESVQALREMMREGVEQEIAWGHYVIGDDIPGLN 278

Query: 62  APSCEQYMQFIANRRCHQIG---LEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N R   +G   L P F+       W+S+  D    K +FFE R T Y 
Sbjct: 279 RQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVKTDFFEARSTAYA 338

Query: 118 QGAEL 122
           +   L
Sbjct: 339 KSTAL 343


>gi|22164633|ref|NP_671546.1| EVM028 [Ectromelia virus]
 gi|22123774|gb|AAM92332.1|AF523264_28 EVM028 [Ectromelia virus]
          Length = 319

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++FIA+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFIADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|330837704|ref|YP_004412345.1| ribonucleotide reductase [Spirochaeta coccoides DSM 17374]
 gi|329749607|gb|AEC02963.1| ribonucleotide reductase [Spirochaeta coccoides DSM 17374]
          Length = 360

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     ++ +++ E P ++T     + R M+ +    EIA+ H  +    VGLN
Sbjct: 232 RDETTHLWLFRSILREMQKEEPAMFTPNLVDEYRAMIKQGADQEIAWGHYVIGDDIVGLN 291

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y+Q++ N RC  +G +P+++ + + P    W+ +  +    K +FFE R T Y 
Sbjct: 292 KDMVTDYIQYLGNLRCTDLGFQPIYEGHDKEPETMKWVGQYSNANLIKTDFFEARNTAYA 351

Query: 118 QGAEL 122
           +   L
Sbjct: 352 KSTSL 356


>gi|56419447|ref|YP_146765.1| ribonucleoside-diphosphate reductase subunit beta [Geobacillus
           kaustophilus HTA426]
 gi|56379289|dbj|BAD75197.1| ribonucleoside-diphosphate reductase beta subunit [Geobacillus
           kaustophilus HTA426]
          Length = 346

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H++    +  ++  E P   T E     R    +A  LEI +A E +     G++
Sbjct: 218 RDEHIHVDLFAKIFKEVLNEYPEYRTPELADFVRNTFMKAAELEIEWAREIIGNDIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEKNFFETRVTEYQQ 118
               E Y++F AN R HQ+G + P   Y  NP  W+   E +DL K  +FFE +  +Y +
Sbjct: 278 LADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGK-SDFFEQKPRQYTK 336


>gi|50545856|ref|XP_500466.1| YALI0B03630p [Yarrowia lipolytica]
 gi|49646332|emb|CAG82692.1| YALI0B03630p [Yarrowia lipolytica]
          Length = 403

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  ++    ++ EA  +E  +  + +P G +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLENRPSKKIVEDVIVEAVGIEQEFLTDALPCGLLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G   ++  T NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 325 AKLMCQYIEFVADRLLVALGNSKVYNST-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 381


>gi|262263187|dbj|BAI48096.1| ribonucleotide reductase M2 [Sus scrofa]
          Length = 355

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 9/116 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 247 RDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMN 299

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV E +
Sbjct: 300 CTLMKQYIEFVADRLMLELGFGKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEIR 353


>gi|303278144|ref|XP_003058365.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459525|gb|EEH56820.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 338

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       +L  K      R ++ EA  +E  +  + +P   VG+N
Sbjct: 208 RDEGLHRDFACLLYS-------YLQNKPDVSIVRQIVCEAVEIEKEFVCDALPVSLVGMN 260

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                +Y++F+A+    Q+GLE  +  T NPF +M E+I L+ + NFFE RV EYQ+  
Sbjct: 261 KDLMSEYIEFVADHLLGQLGLEKEYN-TVNPFEFM-ELISLQGKTNFFEKRVGEYQKSG 317


>gi|32266105|ref|NP_860137.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           hepaticus ATCC 51449]
 gi|32262154|gb|AAP77203.1| ribonucleoside diphosphate reductase [Helicobacter hepaticus ATCC
           51449]
          Length = 349

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I+ ++ E  HL+T   +++   M  +A  +E  +         +GL 
Sbjct: 225 RDEVTHLLLFQNMISSLRKEQGHLFTPSLEEEVVEMFKKAVEIESQWGEYITQGQILGLT 284

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +    +Y+Q++A+ R   +GL  L+  ++NP  W+ +      +K NFFE +VT Y +G+
Sbjct: 285 SEIIREYIQYLADARLKAVGLPQLYG-SKNPIKWVDQFASFNDQKTNFFEAKVTNYSKGS 343


>gi|291165654|gb|EFE27703.1| ribonucleoside-diphosphate reductase, beta subunit [Filifactor
           alocis ATCC 35896]
          Length = 348

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I ++K E P L+T E  +  R M+ +    EI +A+  +     GL 
Sbjct: 220 RDENSHLWLFRSIILELKKEEPELFTPENIEVFRNMIRQGVEEEIKWANYVIGDHIKGLT 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y++++ N RC  +G EP+++ Y   P    W+SE  D    K +FFE +V+ Y 
Sbjct: 280 MQMVEDYLKYLGNLRCRGLGFEPIYEGYQREPESMSWVSEYSDPNAIKTDFFEGKVSAYA 339

Query: 118 QGAELKWD 125
           + + ++ D
Sbjct: 340 KSSVIEDD 347


>gi|149279601|ref|ZP_01885730.1| ribonucleoside-diphosphate reductase 1, beta subunit [Pedobacter
           sp. BAL39]
 gi|149229637|gb|EDM35027.1| ribonucleoside-diphosphate reductase 1, beta subunit [Pedobacter
           sp. BAL39]
          Length = 324

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F   + + +K        K  ++    ++ +A  +E  +  + +P   +G+N
Sbjct: 197 RDEGSHCEFACLLYSMLK-------NKLSEEHVHGIIRDAVEIEKEFVTDALPVALIGMN 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R   ++G   ++  T NPF +M E+I L+ + NFFE RV +YQ+   
Sbjct: 250 AKLMSQYIEFVADRWLQELGYTKIYHAT-NPFDFM-EMISLQGKTNFFEKRVGDYQKSGV 307

Query: 122 L 122
           L
Sbjct: 308 L 308


>gi|149194868|ref|ZP_01871962.1| ribonucleotide-diphosphate [Caminibacter mediatlanticus TB-2]
 gi|149135027|gb|EDM23509.1| ribonucleotide-diphosphate [Caminibacter mediatlanticus TB-2]
          Length = 346

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 3/122 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H     ++  +IK E P L+T E  +  + ML+ A  LE  +         +GL+
Sbjct: 219 RDEVTHTLLFANIFKEIKKEFPDLFTPEVIRNIKDMLYAAYELERDWGFYITNDEILGLS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
               +++ +++AN+R H +GLE LF     +NP  W        ++K NFFE  V  Y +
Sbjct: 279 KELIDRFTKYLANKRAHAMGLELLFPEIGLKNPISWFDSFSSFNEQKTNFFEGNVVNYSK 338

Query: 119 GA 120
           G+
Sbjct: 339 GS 340


>gi|6969682|gb|AAF33894.1| TF4L [Vaccinia virus Tian Tan]
          Length = 319

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE L  +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLRCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               E Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQQ
Sbjct: 248 CEMMETYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQQ 302


>gi|167462363|ref|ZP_02327452.1| ribonucleoside-diphosphate reductase beta subunit [Paenibacillus
           larvae subsp. larvae BRL-230010]
          Length = 343

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 64/117 (54%), Gaps = 2/117 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H+     +  ++  ENP L  +E  +  R    +A  LEIA++   +   F G+ 
Sbjct: 215 RDEEIHVRLFTQIFRELIAENPELDNEETHEFVRQTFRKAAELEIAWSEYIIGDRFDGVT 274

Query: 62  APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEY 116
           +   ++Y++F+AN+R +++G+E P   +  N   W+    +    K +FFE+RVT+Y
Sbjct: 275 SRDLDKYVRFMANKRVNELGIERPFEGHRRNNLRWIKAYEENDAGKTDFFESRVTQY 331


>gi|56404698|sp|O57175|RIR2_VACCA RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2772676|gb|AAB96415.1| ribonucleotide reductase, small subunit [Vaccinia virus]
 gi|47088360|gb|AAT10430.1| ribonucleotide reductase small subunit [Vaccinia virus]
 gi|160857924|emb|CAM58212.1| ribonucleotide reductase small subunit [Vaccinia virus Ankara]
          Length = 319

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|66275840|ref|YP_232925.1| ribonucleotide reductase small subunit [Vaccinia virus]
 gi|132629|sp|P11158|RIR2_VACCV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|335624|gb|AAA48244.1| F4L protein [Vaccinia virus]
 gi|335809|gb|AAA88680.1| ribonucleotide reductase (EC 1.17.4.1) small subunit [Vaccinia
           virus]
 gi|29692149|gb|AAO89322.1| ribonucleotide reductase small subunit [Vaccinia virus WR]
          Length = 319

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|56713400|gb|AAW23440.1| ribonucleoside-diphosphate reductase [Vaccinia virus]
 gi|56713684|gb|AAW23722.1| ribonucleoside-diphosphate reductase [Vaccinia virus]
 gi|88854075|gb|ABD52493.1| ribonucleoside-diphosphate reductase subunit [Vaccinia virus]
 gi|167412519|gb|ABZ79953.1| ribonucleotide reductase small subunit [Vaccinia virus GLV-1h68]
          Length = 319

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|20178418|ref|NP_619839.1| CPXV051 protein [Cowpox virus]
 gi|20153036|gb|AAM13497.1|AF482758_48 CPXV051 protein [Cowpox virus]
          Length = 333

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 209 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 262 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 316


>gi|13876672|gb|AAK43560.1| ribonucleoside reductase [lumpy skin disease virus]
          Length = 321

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K    +            +++EA  +E  +    +P   +G+N
Sbjct: 196 RDEGLHCDFACLIFKHLKYPPSN-------DIITIIINEAVSIEKEFLTNIIPVKLIGMN 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++FIA+R   ++G + +F  T NPF +M E I L+ + NFFE RV+EYQ+
Sbjct: 249 CVLMSQYIEFIADRLLLELGCDKVFMST-NPFDFM-ENISLEGKTNFFEKRVSEYQK 303


>gi|90660281|gb|ABD97395.1| ribonucleotide reductase small subunit [Cowpox virus]
          Length = 333

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 209 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 262 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 316


>gi|266919|sp|P29883|RIR2_VACCP RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|335710|gb|AAA48294.1| F14 [Vaccinia virus]
          Length = 319

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|149185037|ref|ZP_01863354.1| ribonucleotide reductase beta subunit [Erythrobacter sp. SD-21]
 gi|148831148|gb|EDL49582.1| ribonucleotide reductase beta subunit [Erythrobacter sp. SD-21]
          Length = 352

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    I + ++   E   L TK  ++    +  +   LE  +       G V G
Sbjct: 189 IRDESLHCEGIIRMFHEFVRERDCL-TKAVKEDIIDICQKTVRLEDNFIDLAFEMGPVSG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     ++Y+++IA+ R  Q+ L+P++   ++P PW++ +I+  +  NFFE R TEY +G
Sbjct: 248 MTPKDIKKYIRYIADWRLGQLNLDPIYMVDDHPLPWLAPLINGVEHANFFEQRATEYSKG 307

Query: 120 A 120
           A
Sbjct: 308 A 308


>gi|22595713|gb|AAN02745.1| ribonucleotide reductase small subunit [lumpy skin disease virus]
          Length = 321

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K    +            +++EA  +E  +    +P   +G+N
Sbjct: 196 RDEGLHCDFACLIFKHLKYPPSN-------DIITIIINEAVSIEKEFLTNIIPVKLIGMN 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++FIA+R   ++G + +F  T NPF +M E I L+ + NFFE RV+EYQ+
Sbjct: 249 CVLMSQYIEFIADRLLLELGCDKVFMST-NPFDFM-ENISLEGKTNFFEKRVSEYQK 303


>gi|157164305|ref|YP_001467763.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           concisus 13826]
 gi|112800348|gb|EAT97692.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           concisus 13826]
          Length = 340

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+T E + K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFTPETEAKIYDMFEKAGNLEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               EQY+ ++ ++R   IGL+  +    +P  W+ +      +K NFFE +VT Y +G+
Sbjct: 276 DDIIEQYIHYLIDQRLVAIGLKRKYN-VAHPIKWVDDFAKFNDQKSNFFEAKVTNYSKGS 334


>gi|46446983|ref|YP_008348.1| ribonucleoside-diphosphate reductase small chain [Candidatus
           Protochlamydia amoebophila UWE25]
 gi|46400624|emb|CAF24073.1| probable ribonucleoside-diphosphate reductase small chain
           [Candidatus Protochlamydia amoebophila UWE25]
          Length = 323

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +Q+  + P        +  + ++  A  +E  +  + +P   +G+N
Sbjct: 198 RDEGLHCDFACLLYSQLNNKLP-------LETLQAIISHAVAIEKEFVQDALPVRLIGMN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G   L+   +NPF +M ++I +  + NFFE RV+EYQ+  
Sbjct: 251 ATLMCQYIEFVADRLLVALGSPKLYN-VDNPFDFM-DLISMPGKTNFFERRVSEYQKSG 307


>gi|109947017|ref|YP_664245.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           acinonychis str. Sheeba]
 gi|109714238|emb|CAJ99246.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter
           acinonychis str. Sheeba]
          Length = 341

 Score = 63.9 bits (154), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLIDEVIEMFKKAVKIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKIYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|313768143|ref|YP_004061574.1| hypothetical protein BpV1_144c [Bathycoccus sp. RCC1105 virus BpV1]
 gi|312599750|gb|ADQ91771.1| hypothetical protein BpV1_144c [Bathycoccus sp. RCC1105 virus BpV1]
          Length = 387

 Score = 63.5 bits (153), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 9/120 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H  F +++ N +K        K  Q     ++ +A  +E  +  + +P   +G+N
Sbjct: 266 RDEGMHQEFAVELFNMLK-------NKPSQNTIEEIIRDAVSIEKEFITDALPCSLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    +Y++++A+R   Q+G   ++  T+NPF +M E I L  + NFFE RV +Y +  E
Sbjct: 319 SGKMSEYIEYVADRLSKQVGHNKIWN-TKNPFDFM-ENISLDGKTNFFEKRVGDYGKMDE 376


>gi|311748425|ref|ZP_07722210.1| ribonucleoside-diphosphate reductase, beta subunit [Algoriphagus
           sp. PR1]
 gi|126576938|gb|EAZ81186.1| ribonucleoside-diphosphate reductase, beta subunit [Algoriphagus
           sp. PR1]
          Length = 326

 Score = 63.5 bits (153), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 68/127 (53%), Gaps = 18/127 (14%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEF-----QQKSRTMLHEATLLEIAYAHETMPKG 56
           RDE LH +F             HL+TK       ++  R ++ +A  +E  +  + +P  
Sbjct: 196 RDEGLHCDFAC-----------HLYTKHVVNPLPKETVREIIIDAVKIEKEFVTDALPVR 244

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
            +G+N+    QY++F+A+R   ++  E ++  T NPF +M ++I L+ + NFFE RV +Y
Sbjct: 245 LIGMNSDLMCQYIEFVADRLLLELDCEKVWNST-NPFDFM-DMISLQGKTNFFEKRVGDY 302

Query: 117 QQGAELK 123
           Q+   +K
Sbjct: 303 QKAGVMK 309


>gi|15150459|ref|NP_150454.1| LSDV020 ribonucleotide reductase small subunit [Lumpy skin disease
           virus NI-2490]
 gi|15149031|gb|AAK84981.1| LSDV020 ribonucleotide reductase small subunit [Lumpy skin disease
           virus NI-2490]
 gi|22595554|gb|AAN02587.1| ribonucleotide reductase small subunit [Lumpy skin disease virus
           NW-LW]
          Length = 321

 Score = 63.5 bits (153), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K    +       +    +++EA  +E  +    +P   +G+N
Sbjct: 196 RDEGLHCDFACLIFKHLKYPPSN-------EIITIIINEAVSIEKEFLTNIIPVKLIGMN 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++FIA+R   ++G + +F  T NPF +M E I L+ + NFFE RV+EYQ+
Sbjct: 249 CDLMSQYIEFIADRLLLELGCDKVFMST-NPFDFM-ENISLEGKTNFFEKRVSEYQK 303


>gi|438946|gb|AAA60776.1| homolog of vaccinia virus CDS F4L (ribonucleotide reductase, small
           chain); putative [Variola major virus]
 gi|94484491|gb|ABF23604.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94484688|gb|ABF23800.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94484886|gb|ABF23997.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724274|gb|ABG43399.1| ribonucleotide reductase small subunit [Variola virus]
          Length = 333

 Score = 63.5 bits (153), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 209 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 262 CEMMKTYIKFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 316


>gi|885759|gb|AAA69374.1| E4L [Variola virus]
 gi|5830589|emb|CAB54628.1| E4L protein [Variola minor virus]
 gi|94483674|gb|ABF22791.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94484287|gb|ABF23401.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485692|gb|ABF24799.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486095|gb|ABF25200.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486298|gb|ABF25402.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486501|gb|ABF25604.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486703|gb|ABF25805.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486906|gb|ABF26007.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487312|gb|ABF26411.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487921|gb|ABF27017.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489931|gb|ABF29017.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724476|gb|ABG43600.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635085|gb|ABU91534.1| ribonucleotide reductase small subunit [Variola virus]
          Length = 319

 Score = 63.5 bits (153), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|312075738|ref|XP_003140550.1| ribonucleotide reductase M2 B [Loa loa]
 gi|307764288|gb|EFO23522.1| ribonucleotide reductase M2 B [Loa loa]
          Length = 350

 Score = 63.5 bits (153), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   IK        K  +++   ++ EA  +E  Y  E +P   +G+N
Sbjct: 225 RDEGLHRDFACLLYTYIK-------NKPSEERIYQIIREAVDIEKEYLTEALPVDLIGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++++A+    ++    ++ Y++NPF +M E I ++ + NFFE RV+EYQ+   
Sbjct: 278 CKLMCQYIEYVADHLLTELHCAKMY-YSDNPFDFM-ERISIEAKTNFFEKRVSEYQKAGV 335

Query: 122 L 122
           L
Sbjct: 336 L 336


>gi|304439119|ref|ZP_07399038.1| ribonucleotide-diphosphate reductase beta subunit [Peptoniphilus
           duerdenii ATCC BAA-1640]
 gi|304372478|gb|EFM26065.1| ribonucleotide-diphosphate reductase beta subunit [Peptoniphilus
           duerdenii ATCC BAA-1640]
          Length = 347

 Score = 63.5 bits (153), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I  +K E P L+T+E  ++ R +L      EIA+    +     GL 
Sbjct: 219 RDENTHLWLFRSIILDLKKEQPELFTEEKVEEYRALLKYGVEEEIAWGKYVIGDDIQGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
           +   E Y++++ N R   +G EPL++  +       W+++  D+   K +FFE +VT Y 
Sbjct: 279 SKMVEDYIKYLGNLRATNLGFEPLYEGYDKEVESMKWVTQYADINLLKTDFFEAKVTAYS 338

Query: 118 QGAELKWD 125
           + A ++ D
Sbjct: 339 KSAIIEDD 346


>gi|113195221|ref|YP_717351.1| ribonucleotide reductase small subunit [Taterapox virus]
 gi|90660497|gb|ABD97610.1| ribonucleotide reductase small subunit [Taterapox virus]
          Length = 319

 Score = 63.5 bits (153), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|156387375|ref|XP_001634179.1| predicted protein [Nematostella vectensis]
 gi|156221259|gb|EDO42116.1| predicted protein [Nematostella vectensis]
          Length = 384

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +   +L  K  ++  R ++ +A ++E  +    +P   +G+N
Sbjct: 259 RDEGLHCDFAC-------LMYKYLVNKPDEETVRGIIKDAVVIEQEFLTSALPVKLIGMN 311

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +  + ++   ENPF +M E I L+ + NFFE RV EYQ+  
Sbjct: 312 CALMRQYIEFVADRLLVALNCQKVYN-AENPFDFM-ENISLEGKTNFFEKRVGEYQKSG 368


>gi|885717|gb|AAA69333.1| C8L [Variola virus]
 gi|885826|gb|AAA69439.1| C8L [Variola virus]
 gi|94483878|gb|ABF22994.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94484081|gb|ABF23196.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485084|gb|ABF24194.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485286|gb|ABF24395.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485489|gb|ABF24597.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485894|gb|ABF25000.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487109|gb|ABF26209.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487515|gb|ABF26613.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487716|gb|ABF26813.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488123|gb|ABF27218.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488323|gb|ABF27417.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488523|gb|ABF27616.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488724|gb|ABF27816.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488925|gb|ABF28016.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489125|gb|ABF28215.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489324|gb|ABF28413.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489527|gb|ABF28615.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489726|gb|ABF28813.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94490135|gb|ABF29220.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724070|gb|ABG43196.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724681|gb|ABG43804.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724885|gb|ABG44007.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725088|gb|ABG44209.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725293|gb|ABG44413.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725496|gb|ABG44615.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725700|gb|ABG44818.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725903|gb|ABG45020.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109726107|gb|ABG45223.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109726310|gb|ABG45425.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109726513|gb|ABG45627.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635013|gb|ABU91466.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635031|gb|ABU91483.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635049|gb|ABU91500.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635067|gb|ABU91517.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635103|gb|ABU91551.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635121|gb|ABU91568.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635139|gb|ABU91585.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635158|gb|ABU91603.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635176|gb|ABU91620.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635194|gb|ABU91637.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635212|gb|ABU91654.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635230|gb|ABU91671.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635248|gb|ABU91688.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635266|gb|ABU91705.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635284|gb|ABU91722.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635320|gb|ABU91756.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635338|gb|ABU91773.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635356|gb|ABU91790.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635374|gb|ABU91807.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635392|gb|ABU91824.1| ribonucleotide reductase small subunit [Variola virus]
 gi|157739431|gb|ABU91739.1| ribonucleotide reductase small subunit [Variola virus]
          Length = 319

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIKFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|169860861|ref|XP_001837065.1| ribonucleotide reductase small subunit [Coprinopsis cinerea
           okayama7#130]
 gi|116501787|gb|EAU84682.1| ribonucleotide reductase small subunit [Coprinopsis cinerea
           okayama7#130]
          Length = 414

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + + +K   PH          + ++ EA  +E  +  + +P   +G+N
Sbjct: 278 RDEGMHTDFACLLFSHLK-RRPH------PDVVKRIITEAVAIEQEFLTDALPVKLIGMN 330

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E ++  T NPF +M ++I L+ + NFFE RV++Y +  
Sbjct: 331 AELMCQYIEFVADRLLVSLGNEKVYNST-NPFDFM-DMISLQGKTNFFEKRVSDYAKAG 387


>gi|154174558|ref|YP_001409201.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           curvus 525.92]
 gi|112803525|gb|EAU00869.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           curvus 525.92]
          Length = 340

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T E ++K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRAERSDLFTPEMEEKIYDMFEKAGNLEIKWGRYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   IGL+  +   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLVAIGLKRKYN-AKHPIKWVDDFAKFNDQKSNFFESKVTNYSKGS 334


>gi|294501621|ref|YP_003565321.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           megaterium QM B1551]
 gi|295706969|ref|YP_003600044.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           megaterium DSM 319]
 gi|294351558|gb|ADE71887.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           megaterium QM B1551]
 gi|294804628|gb|ADF41694.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           megaterium DSM 319]
          Length = 347

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH+     +  ++  ENP   T+E +        EA  LEI +A   + + F G+ 
Sbjct: 217 RDEQLHVGLFEKIFKEVLNENPAYRTEELETFVVETFQEAARLEIEWAESVIGEKFDGIT 276

Query: 62  APSCEQYMQFIANRRCHQIGL-------EPLFKYTENPFPWM--SEVIDLKKEKNFFETR 112
               +QY++++AN+RC+Q+G         P+    ENP  W+   + +DL K  +FFE +
Sbjct: 277 MKELQQYIEYMANKRCNQLGFGRAAFPEAPI----ENPLRWIIAYQEVDLGK-TDFFEQK 331

Query: 113 VTEYQQGAE 121
             +Y + ++
Sbjct: 332 SRQYTKASD 340


>gi|131840053|ref|YP_001096062.1| ORF23 [Cyprinid herpesvirus 3]
 gi|84181618|gb|ABC55221.1| hypothetical protein [Cyprinid herpesvirus 3]
 gi|109706628|gb|ABG42854.1| ORF23 [Cyprinid herpesvirus 3]
 gi|129560539|dbj|BAF48834.1| ribonucleotide reductase small chain [Cyprinid herpesvirus 3]
          Length = 335

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 8/116 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K  +++ R ++ EA  +E  +  +++P   VG+N
Sbjct: 208 RDEGLHRDFACLLFSS------HLRHKPSKERVRAIITEAVEIEKEFLTQSLPVSLVGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
                +Y+Q++A+    Q+GL  L+  T  PF +M E I L+ + NFFE RV +YQ
Sbjct: 262 HDLMCKYIQYVADHLLCQMGLSRLYN-TPCPFDFM-ENISLEGKTNFFEKRVADYQ 315


>gi|317014473|gb|ADU81909.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Gambia94/24]
          Length = 341

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKIYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|302696699|ref|XP_003038028.1| hypothetical protein SCHCODRAFT_12788 [Schizophyllum commune H4-8]
 gi|300111725|gb|EFJ03126.1| hypothetical protein SCHCODRAFT_12788 [Schizophyllum commune H4-8]
          Length = 377

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H  F   + + ++   PH          + ++ EA  +E  +  + +P   +G+N
Sbjct: 257 RDEGMHTEFACLLFSHLR-HRPH------PSVVQRIVKEAVAIEHEFLSDALPVSLIGMN 309

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           A    QY++F+A+R  + +G   ++  T NPF +M ++I L+ + NFFE RV+EY + 
Sbjct: 310 AALMRQYIEFVADRLLYSLGQNKIYNAT-NPFDFM-DMISLQGKTNFFEKRVSEYAKA 365


>gi|317011285|gb|ADU85032.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori SouthAfrica7]
          Length = 341

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLIDEVIEMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKIYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|298707394|emb|CBJ30029.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 380

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 17/123 (13%)

Query: 2   RDESLHLNFGI----DVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 57
           RDE LH +F       ++N++ +E           +   ++ +A  +E  +    +P   
Sbjct: 255 RDEGLHTDFACLLFRKLVNKLPVE-----------RVAEIICDAVDIEKEFITSALPVEL 303

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
           +G+N+    QY++F A+R   ++G E  +  T NPF WM E+I L+ + NFFE RV EY 
Sbjct: 304 IGMNSALMRQYIEFCADRLLMELGCEKKYNST-NPFDWM-EMISLQGKTNFFEKRVGEYS 361

Query: 118 QGA 120
           +  
Sbjct: 362 KSG 364


>gi|58260896|ref|XP_567858.1| ribonucleoside-diphosphate reductase [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134116993|ref|XP_772723.1| hypothetical protein CNBK0970 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255341|gb|EAL18076.1| hypothetical protein CNBK0970 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229939|gb|AAW46341.1| ribonucleoside-diphosphate reductase, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 401

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   ++   PH            ++ EA  +E  +  + +P   +G+N
Sbjct: 269 RDEGLHTDFACLLFTHLR-RRPH------PDTIARIIKEAVTIEQEFLTDALPVSLIGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E ++  T NPF +M E+I L+ + NFFE+RV+ Y +  
Sbjct: 322 AKLMCQYIEFVADRLLVAMGNEKIWNST-NPFDFM-EMISLQGKANFFESRVSAYSKSG 378


>gi|188527870|ref|YP_001910557.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Shi470]
 gi|188144110|gb|ACD48527.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Shi470]
 gi|308063873|gb|ADO05760.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Sat464]
          Length = 341

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|8101697|gb|AAF72618.1|AF252539_2 ribonucleotide reductase small subunit M2 [Leishmania amazonensis]
          Length = 345

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + N H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 218 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  ++ T+ PF +M E+I L+ + NFFE RV EYQ+  
Sbjct: 272 AELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFFEKRVGEYQKAG 328


>gi|257453171|ref|ZP_05618470.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp.
           3_1_5R]
 gi|317059706|ref|ZP_07924191.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 3_1_5R]
 gi|313685382|gb|EFS22217.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 3_1_5R]
          Length = 344

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 9/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I +IK ENP+ + +E   + R M   A   EI +    +    +G+ 
Sbjct: 216 RDELSHVVLFQKIIREIKAENPNFFQEE---EIRMMFQTAVEQEILWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
             + E Y +++AN R   IGL P++  +T+NP+  +    D + +     NFFE  VT Y
Sbjct: 273 TETTEAYTKWLANERLRTIGLAPMYDGFTKNPYKHLERFADTEGDGNVKSNFFEGTVTSY 332

Query: 117 QQGAELK-WD 125
              + +  WD
Sbjct: 333 NMSSSIDGWD 342


>gi|73544537|ref|XP_848163.1| ribonucleoside-diphosphate reductase small chain [Leishmania major
           strain Friedlin]
 gi|321438516|emb|CBZ12275.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania major strain Friedlin]
          Length = 388

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + N H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 261 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 314

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  ++ T+ PF +M E+I L+ + NFFE RV EYQ+  
Sbjct: 315 AELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFFEKRVGEYQKAG 371


>gi|317178607|dbj|BAJ56395.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori F30]
          Length = 341

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|308183194|ref|YP_003927321.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori PeCan4]
 gi|308065379|gb|ADO07271.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori PeCan4]
          Length = 341

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|261838422|gb|ACX98188.1| ribonucleoside-diphosphate reductase 1 beta subunit [Helicobacter
           pylori 51]
          Length = 341

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|156387377|ref|XP_001634180.1| predicted protein [Nematostella vectensis]
 gi|156221260|gb|EDO42117.1| predicted protein [Nematostella vectensis]
          Length = 341

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +   +L  K  ++  R ++ +A ++E  +    +P   +G+N
Sbjct: 216 RDEGLHCDFAC-------LMYKYLVNKPDEETVRGIIKDAVVIEQEFLTSALPVKLIGMN 268

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +  + ++   ENPF +M E I L+ + NFFE RV EYQ+  
Sbjct: 269 CALMRQYIEFVADRLLVALNCQKVYN-VENPFDFM-ENISLEGKTNFFEKRVGEYQKSG 325


>gi|3914644|sp|O46310|RIR2_LEIAM RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
           AltName: Full=Ribonucleotide reductase M2 subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2828563|gb|AAC08302.1| ribonucleotide reductase M2 subunit [Leishmania amazonensis]
          Length = 345

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + N H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 218 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  ++ T+ PF +M E+I L+ + NFFE RV EYQ+  
Sbjct: 272 AELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFFEKRVGEYQKAG 328


>gi|321263777|ref|XP_003196606.1| ribonucleoside-diphosphate reductase [Cryptococcus gattii WM276]
 gi|317463083|gb|ADV24819.1| Ribonucleoside-diphosphate reductase, putative [Cryptococcus gattii
           WM276]
          Length = 401

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   ++   PH            ++ EA  +E  +  + +P   +G+N
Sbjct: 269 RDEGLHTDFACLLFTHLR-RRPH------PDTIARIIKEAVSIEQEFLTDALPVSLIGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E ++  T NPF +M E+I L+ + NFFE+RV+ Y +  
Sbjct: 322 AKLMCQYIEFVADRLLVALGNEKIWNST-NPFDFM-EMISLQGKANFFESRVSAYSKSG 378


>gi|297380266|gb|ADI35153.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori v225d]
 gi|308062365|gb|ADO04253.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Cuz20]
 gi|317180823|dbj|BAJ58609.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori F32]
 gi|332673890|gb|AEE70707.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter
           pylori 83]
          Length = 341

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|257467364|ref|ZP_05631675.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315918494|ref|ZP_07914734.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|313692369|gb|EFS29204.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 344

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 9/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I +IK ENP+ + +E   + R M   A   EI +    +    +G+ 
Sbjct: 216 RDELSHVVLFQKIIREIKAENPNFFQEE---EIRMMFQTAVEQEILWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
             + E Y +++AN R   IGL P++  +T+NP+  +    D + +     NFFE  VT Y
Sbjct: 273 TETTEAYTKWLANERLRTIGLAPMYDGFTKNPYKHLERFADTEGDGNVKSNFFEGTVTSY 332

Query: 117 QQGAELK-WD 125
              + +  WD
Sbjct: 333 NMSSSIDGWD 342


>gi|210135249|ref|YP_002301688.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori P12]
 gi|210133217|gb|ACJ08208.1| ribonucleoside-diphosphate reductase 1 beta subunit [Helicobacter
           pylori P12]
          Length = 341

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|109287926|ref|YP_654620.1| hypothetical protein MIV048L [Invertebrate iridescent virus 3]
 gi|123878658|sp|Q197B2|RIR2_IIV3 RecName: Full=Probable ribonucleoside-diphosphate reductase small
           subunit 048L; AltName: Full=Ribonucleotide reductase
           small subunit
 gi|106073549|gb|ABF82078.1| hypothetical protein MIV048L [Aedes taeniorhynchus iridescent
           virus]
          Length = 376

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 2/122 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIEN-PHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FV 58
           + DE+ H N  +++ + + +EN  H+     + + R    +   LE  +       G   
Sbjct: 248 IADETHHTNSMMELFSTLVVENKSHIRLGVLEARVRDTARKIVQLEDGFIDLAFSMGEMR 307

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
            L A   + Y+++I NRR   +G  PL+   ENP PW+ ++++     NFFE + TEY +
Sbjct: 308 QLTADDVKSYIRYITNRRLQTMGYLPLYSVVENPLPWVEDLLNAPSHTNFFENKPTEYAK 367

Query: 119 GA 120
            +
Sbjct: 368 AS 369


>gi|269963257|ref|ZP_06177590.1| hypothetical protein VME_39740 [Vibrio harveyi 1DA3]
 gi|269832005|gb|EEZ86131.1| hypothetical protein VME_39740 [Vibrio harveyi 1DA3]
          Length = 310

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 16/129 (12%)

Query: 2   RDESLHLNFG---IDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
           RDE LH +F       + Q K+          QQ+   +  EA  +E  +  E +P   +
Sbjct: 190 RDEGLHFSFSALLFKTLGQGKVT---------QQEFEEICREAVSIEKEFVTEALPVDLI 240

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ- 117
           G+NA    QY++  A+      G  P+F   ENPF +M  ++D++ + NFFE RVTEY+ 
Sbjct: 241 GMNAELMCQYIEHTADVIAGLFGFTPIFG-AENPFDYM-RLLDMEGKTNFFEKRVTEYKR 298

Query: 118 -QGAELKWD 125
            Q  +L +D
Sbjct: 299 PQDRQLSFD 307


>gi|194755279|ref|XP_001959919.1| GF11796 [Drosophila ananassae]
 gi|190621217|gb|EDV36741.1| GF11796 [Drosophila ananassae]
          Length = 393

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +         HL  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHCDFAVLMFQ-------HLVQKPRRERIIEIIRDAVDIEQEFLTDALPVNLIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFFE +V EYQ+
Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVGEYQR 375


>gi|326797773|ref|YP_004315592.1| ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
 gi|326548537|gb|ADZ76922.1| Ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
          Length = 323

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F   + + ++ + P       +++ + ++ +A  +E  +  + +P   +G+N
Sbjct: 198 RDEGLHCEFACLLYSMLEAKLP-------KERVQEIIIDAVEIEKEFITDALPVKLIGMN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A   +QY++F+A+R   ++G    +  T NPF +M E+I L+ + NFFE RV +YQ+  
Sbjct: 251 ADLMKQYIEFVADRWLVELGNSKYYNAT-NPFDFM-ELISLQGKTNFFEKRVGDYQKSG 307


>gi|297530897|ref|YP_003672172.1| ribonucleotide reductase [Geobacillus sp. C56-T3]
 gi|297254149|gb|ADI27595.1| ribonucleotide reductase [Geobacillus sp. C56-T3]
          Length = 346

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H++    +  ++  E P   T E     R    +A  LEI +A E +     G++
Sbjct: 218 RDEHIHVDLFAKIFKEVLNEYPEYRTPELSDFVRETFTKAAELEIEWAGEIIGNDIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEKNFFETRVTEYQQ 118
               E Y++F AN R HQ+G + P   Y  NP  W+   E +DL K  +FFE +  +Y +
Sbjct: 278 LADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGK-SDFFEQKPRQYTK 336


>gi|323453718|gb|EGB09589.1| hypothetical protein AURANDRAFT_60022 [Aureococcus anophagefferens]
          Length = 393

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 7/118 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +++     HL   +   ++  ++ EA   E+ +  + +P   VG+N
Sbjct: 265 RDEGLHCDFACALYSRLP---GHLRLSD--AEATAIISEAVDTEVDFVTDALPVSLVGMN 319

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           A     Y++F+A+R    +G  P      NPF +M E+I ++ + NFFE RV EYQ+ 
Sbjct: 320 AKLMTDYVKFVADRLLASLG-HPKIYGAANPFDFM-ELISMQGKTNFFEKRVAEYQKA 375


>gi|261419130|ref|YP_003252812.1| ribonucleoside-diphosphate reductase [Geobacillus sp. Y412MC61]
 gi|319765947|ref|YP_004131448.1| ribonucleotide reductase [Geobacillus sp. Y412MC52]
 gi|261375587|gb|ACX78330.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. Y412MC61]
 gi|317110813|gb|ADU93305.1| ribonucleotide reductase [Geobacillus sp. Y412MC52]
          Length = 346

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H++    +  ++  E P   T E     R    +A  LEI +A E +     G++
Sbjct: 218 RDEHIHVDLFAKIFKEVLNEYPEYRTPELSDFVRETFTKAAELEIEWAGEIIGNDIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEKNFFETRVTEYQQ 118
               E Y++F AN R HQ+G + P   Y  NP  W+   E +DL K  +FFE +  +Y +
Sbjct: 278 LADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGK-SDFFEQKPRQYTK 336


>gi|155370982|ref|YP_001426516.1| hypothetical protein ATCV1_Z035L [Acanthocystis turfacea Chlorella
           virus 1]
 gi|155124302|gb|ABT16169.1| hypothetical protein ATCV1_Z035L [Acanthocystis turfacea Chlorella
           virus 1]
          Length = 325

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 9/124 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  FG  + +  K+EN     K      ++++ EA   E  +  + +P   +G+N
Sbjct: 201 RDEGLHQQFGELLYS--KLEN-----KLSLDVVKSIVEEAVANEKDFICDAIPCRMIGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G    F   ENPF +M E+I L+ + NFFE RV+EYQ+   
Sbjct: 254 SDLMSQYIEFVADRIFTALGYPKQFG-AENPFDFM-ELISLEGKSNFFERRVSEYQKAGV 311

Query: 122 LKWD 125
           +  D
Sbjct: 312 MNAD 315


>gi|255711354|ref|XP_002551960.1| KLTH0B03938p [Lachancea thermotolerans]
 gi|238933338|emb|CAR21522.1| KLTH0B03938p [Lachancea thermotolerans]
          Length = 403

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K        ++ EA  +E  Y  + +P   +G+N
Sbjct: 273 RDEGLHTDFACLLF-------AHLKNKPDPAIIERIITEAVEIEQRYFRDALPVSLLGMN 325

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G +  +  T NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 326 ADLMNQYVEFVADRLLVALGNQKFYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 382


>gi|84998662|ref|XP_954052.1| ribonucleotide reductase R2 subunit or ribonucleoside-diphosphate
           reductase small chain [Theileria annulata]
 gi|65305050|emb|CAI73375.1| ribonucleotide reductase R2 subunit or ribonucleoside-diphosphate
           reductase small chain, putative [Theileria annulata]
          Length = 322

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 56/95 (58%), Gaps = 8/95 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +FG  + + +K + P       ++  + ++ EA ++E +Y  +++P   +G+N
Sbjct: 224 RDEGLHADFGCFIYHNLKHKLP-------EEAVQQIIKEAVVVERSYICDSLPCDLIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
           +    QY++F+A+R    +G+ P++  T NPF WM
Sbjct: 277 SQLMTQYIEFVADRLLQSLGVRPVYNVT-NPFDWM 310


>gi|124010268|ref|ZP_01694921.1| ribonucleoside-diphosphate reductase, beta subunit [Microscilla
           marina ATCC 23134]
 gi|123983653|gb|EAY24093.1| ribonucleoside-diphosphate reductase, beta subunit [Microscilla
           marina ATCC 23134]
          Length = 330

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + N ++  K   +   +++  A  +E  +  + +P   +G+N
Sbjct: 200 RDEGLHCDFAC------LLYNSYIKNKLPNETVVSIIKNAVEIEKEFVTDALPVKLIGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    +Y++F+A+R   ++G E  +  T NPF +M E+I L+ + NFFE RV+EY +  
Sbjct: 254 SDLMSEYIEFVADRLLVELGCEKQYN-TANPFDFM-EMISLEGKTNFFEKRVSEYSKAG 310


>gi|323308423|gb|EGA61668.1| Rnr2p [Saccharomyces cerevisiae FostersO]
          Length = 399

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K        ++ EA  +E  Y  + +P   +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R     G +  +K  ENPF +M E I L  + NFFE RV++YQ+  
Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380


>gi|254779643|ref|YP_003057749.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori B38]
 gi|254001555|emb|CAX29573.1| Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide
           reductase small subunit) [Helicobacter pylori B38]
          Length = 341

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|207343947|gb|EDZ71248.1| YJL026Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 399

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K        ++ EA  +E  Y  + +P   +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R     G +  +K  ENPF +M E I L  + NFFE RV++YQ+  
Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380


>gi|15612081|ref|NP_223733.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori J99]
 gi|11387046|sp|Q9ZKC3|RIR2_HELPJ RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|4155613|gb|AAD06604.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 BETA CHAIN [Helicobacter
           pylori J99]
 gi|307637755|gb|ADN80205.1| Ribonucleotide reductase of classIa beta subunit [Helicobacter
           pylori 908]
 gi|325996356|gb|ADZ51761.1| Ribonucleotide reductase of class Ia beta subunit [Helicobacter
           pylori 2018]
 gi|325997944|gb|ADZ50152.1| Ribonucleosidase diphosphate reductase beta subunit [Helicobacter
           pylori 2017]
          Length = 341

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|315586979|gb|ADU41360.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter
           pylori 35A]
          Length = 341

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|290771185|emb|CAY80753.2| Rnr2p [Saccharomyces cerevisiae EC1118]
          Length = 399

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE LH +F   +   +K + +P +  K        ++ EA  +E  Y  + +P   +G+
Sbjct: 271 RDEGLHTDFACLLFAHLKNKPDPAIVEK--------IVTEAVEIEQRYFLDALPVALLGM 322

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    QY++F+A+R     G +  +K  ENPF +M E I L  + NFFE RV++YQ+  
Sbjct: 323 NADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380


>gi|151945057|gb|EDN63308.1| ribonucleotide reductase subunit [Saccharomyces cerevisiae YJM789]
 gi|190409471|gb|EDV12736.1| ribonucleotide reductase subunit [Saccharomyces cerevisiae RM11-1a]
 gi|256271075|gb|EEU06176.1| Rnr2p [Saccharomyces cerevisiae JAY291]
          Length = 399

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K        ++ EA  +E  Y  + +P   +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R     G +  +K  ENPF +M E I L  + NFFE RV++YQ+  
Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380


>gi|323347997|gb|EGA82256.1| Rnr2p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 399

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE LH +F   +   +K + +P +  K        ++ EA  +E  Y  + +P   +G+
Sbjct: 271 RDEGLHTDFACLLFAHLKNKPDPAIVEK--------IVTEAVEIEQRYFLDALPVALLGM 322

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    QY++F+A+R     G +  +K  ENPF +M E I L  + NFFE RV++YQ+  
Sbjct: 323 NADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380


>gi|324509007|gb|ADY43795.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum]
          Length = 337

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   IK        K  Q++   ++ EA  LE  Y  E +P   +G+N
Sbjct: 212 RDEGLHRDFACLLYKYIK-------HKPSQEQVYEIIKEAVSLEQEYLTEALPVDLIGMN 264

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++++A+    ++G   ++    NPF +M E + ++ + NFFE RV+EYQ+   
Sbjct: 265 CRLMSQYIEYVADHLLTELGYPKVYN-ASNPFDFM-ENLSIEAKTNFFERRVSEYQRAGV 322

Query: 122 L 122
           L
Sbjct: 323 L 323


>gi|6322434|ref|NP_012508.1| Rnr2p [Saccharomyces cerevisiae S288c]
 gi|1172946|sp|P09938|RIR2_YEAST RecName: Full=Ribonucleoside-diphosphate reductase small chain 1;
           AltName: Full=Ribonucleotide reductase R2 subunit 1;
           AltName: Full=Ribonucleotide reductase small subunit 1
 gi|52695523|pdb|1SMQ|A Chain A, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
           From Saccharomyces Cerevisiae
 gi|52695524|pdb|1SMQ|B Chain B, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
           From Saccharomyces Cerevisiae
 gi|52695525|pdb|1SMQ|C Chain C, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
           From Saccharomyces Cerevisiae
 gi|52695526|pdb|1SMQ|D Chain D, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
           From Saccharomyces Cerevisiae
 gi|172450|gb|AAA34988.1| ribonucleoside diphosphate reductase small subunit [Saccharomyces
           cerevisiae]
 gi|1008142|emb|CAA89317.1| RNR2 [Saccharomyces cerevisiae]
 gi|285812874|tpg|DAA08772.1| TPA: Rnr2p [Saccharomyces cerevisiae S288c]
          Length = 399

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K        ++ EA  +E  Y  + +P   +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R     G +  +K  ENPF +M E I L  + NFFE RV++YQ+  
Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380


>gi|312599293|gb|ADQ91316.1| hypothetical protein BpV2_149c [Bathycoccus sp. RCC1105 virus BpV2]
          Length = 387

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 65/120 (54%), Gaps = 9/120 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H  F +++ N +K        K   +    ++ +A  +E  +  + +P   +G+N
Sbjct: 266 RDEGMHQEFAVELFNMLK-------NKPSGEIIEEIIRDAVTIEKEFITDALPCSLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    +Y++++A+R   Q+G + ++  T+NPF +M E I L  + NFFE RV +Y +  E
Sbjct: 319 SSKMSEYIEYVADRLSKQVGHDKIWN-TKNPFDFM-ENISLDGKTNFFEKRVGDYGKMDE 376


>gi|172448|gb|AAA34987.1| ribonucleotide reductase subunit 2 (RNR2) [Saccharomyces
           cerevisiae]
          Length = 399

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K        ++ EA  +E  Y  + +P   +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R     G +  +K  ENPF +M E I L  + NFFE RV++YQ+  
Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380


>gi|149248382|ref|XP_001528578.1| ribonucleoside-diphosphate reductase small chain [Lodderomyces
           elongisporus NRRL YB-4239]
 gi|146448532|gb|EDK42920.1| ribonucleoside-diphosphate reductase small chain [Lodderomyces
           elongisporus NRRL YB-4239]
          Length = 422

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   +    ++ EA  +E  +  + +P   +G+N
Sbjct: 294 RDEGLHTDFACLLFS-------HLENRPDPKIVEKIISEAVEIEKEFFTDALPVSLLGMN 346

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G E ++K T NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 347 CKLMCQYVEFVADRLLVALGNEKIYKVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 403


>gi|307110551|gb|EFN58787.1| hypothetical protein CHLNCDRAFT_34102 [Chlorella variabilis]
          Length = 335

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  +  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 207 RDEGLHTDFACLLYR-------HIHNRLSEERVAEIVTQAVEIEKEFICDALPVDLIGMN 259

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G  P      NPF WM E+I L+ + NFFE RV +YQ+  
Sbjct: 260 SRLMGQYIEFVADRLLVALG-NPKVYNVSNPFDWM-ELISLQGKTNFFEKRVGDYQKAG 316


>gi|15826569|pdb|1JK0|A Chain A, Ribonucleotide Reductase Y2y4 Heterodimer
          Length = 419

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K        ++ EA  +E  Y  + +P   +G+N
Sbjct: 291 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 343

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R     G +  +K  ENPF +M E I L  + NFFE RV++YQ+  
Sbjct: 344 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAG 400


>gi|150863757|ref|XP_001382334.2| small subunit of ribonucleotide reductase [Scheffersomyces stipitis
           CBS 6054]
 gi|149385013|gb|ABN64305.2| small subunit of ribonucleotide reductase [Scheffersomyces stipitis
           CBS 6054]
          Length = 417

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   +    ++ EA  +E  +  + +P   +G+N
Sbjct: 286 RDEGLHTDFACLLFS-------HLQNRPDAEIVEKIITEAVKIEKEFFTDALPSSLLGMN 338

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G + ++  T NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 339 AELMCQYVEFVADRLLVALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 395


>gi|254517517|ref|ZP_05129573.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium sp.
           7_2_43FAA]
 gi|226911266|gb|EEH96467.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium sp.
           7_2_43FAA]
          Length = 344

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 65/123 (52%), Gaps = 2/123 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ ++++E P ++T E + + + M+  A   EI++ +  +     G+N
Sbjct: 218 RDENTHLWLFRNILKELQLEQPEIFTDEVKNQLKEMMKTAVEHEISWGNYVIGDNIQGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
                 Y++++ N R   IGL+ +++ +  NP  W+  + D    K +FFE + T Y + 
Sbjct: 278 KNLINDYIKYLGNLRMKAIGLDAIYEGHDNNPAAWVDILSDANSVKTDFFEAKSTAYAKA 337

Query: 120 AEL 122
             L
Sbjct: 338 GAL 340


>gi|159465835|ref|XP_001691128.1| ribonucleoside-diphosphate reductase small chain [Chlamydomonas
           reinhardtii]
 gi|158279814|gb|EDP05574.1| ribonucleoside-diphosphate reductase small chain [Chlamydomonas
           reinhardtii]
          Length = 394

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +        T+  + + + ++ EA  +E  +  E +P   +G+N
Sbjct: 267 RDEGLHCDFACMLFSMLN-------TRIDETRVKQIIVEAVEIEQEFCTEALPVDLIGMN 319

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY+QF+A+R    +G    +    NPF +M E+I L+ + NFFE RV +YQ+  
Sbjct: 320 SRLMAQYIQFVADRLLVSLGCAKQYNVV-NPFEFM-EMISLQGKTNFFEKRVGDYQKNG 376


>gi|37551487|gb|AAQ93139.1| ribonucleotide reductase small subunit [Vaccinia virus]
 gi|38348909|gb|AAR17885.1| ribonucleotide reductase small subunit [Vaccinia virus]
 gi|88900660|gb|ABD57572.1| VACV040 [Vaccinia virus]
 gi|90819703|gb|ABD98513.1| VACV-DUKE-051 [Vaccinia virus]
          Length = 319

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R ++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRYIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|323486976|ref|ZP_08092290.1| hypothetical protein HMPREF9474_04041 [Clostridium symbiosum
           WAL-14163]
 gi|323399688|gb|EGA92072.1| hypothetical protein HMPREF9474_04041 [Clostridium symbiosum
           WAL-14163]
          Length = 347

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L+++E     R M+ E    EIA+    +     GL 
Sbjct: 219 RDENTHLWLFGSIIRELQTEEPSLFSREKTDCYREMIREGCEQEIAWGCYAIGDEVPGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N RC  +G EPL+  Y   P    W+S+  +    K +FFE R T Y 
Sbjct: 279 KQMITDYIRYLGNLRCSNLGFEPLYDGYAHEPETMAWVSQYSNANMIKTDFFEARSTAYA 338

Query: 118 QGAEL 122
           + + L
Sbjct: 339 KSSAL 343


>gi|9632043|ref|NP_048832.1| hypothetical protein PBCV1_A476R [Paramecium bursaria Chlorella
           virus 1]
 gi|1620147|gb|AAC96843.1| contains ribonucleotide reductase (RR) signature; similar to
           tobacco RR small subunit, corresponds to Swiss-Prot
           Accession Number P49730 [Paramecium bursaria Chlorella
           virus 1]
          Length = 324

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 70/122 (57%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  FG  + ++++ + P        +  + ++ EA   E  +  + +P   +G+N
Sbjct: 200 RDEGLHQQFGELMYSKLQNKLPF-------ETVKQIITEAVENEKEFICDAIPCRLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G E ++  ++NPF +M E+I L+ + NFFE RV++YQ+   
Sbjct: 253 AELMGQYIEFVADRIFVALGYEKVYN-SKNPFAFM-ELISLQGKTNFFEKRVSDYQRPGV 310

Query: 122 LK 123
           +K
Sbjct: 311 MK 312


>gi|323692021|ref|ZP_08106269.1| ribonucleoside-diphosphate reductase [Clostridium symbiosum
           WAL-14673]
 gi|323503944|gb|EGB19758.1| ribonucleoside-diphosphate reductase [Clostridium symbiosum
           WAL-14673]
          Length = 347

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L+++E     R M+ E    EIA+    +     GL 
Sbjct: 219 RDENTHLWLFGSIIRELQTEEPSLFSREKTDCYREMIREGCEQEIAWGCYAIGDEVPGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N RC  +G EPL+  Y   P    W+S+  +    K +FFE R T Y 
Sbjct: 279 KQMITDYIRYLGNLRCSNLGFEPLYDGYVHEPETMAWVSQYSNANMIKTDFFEARSTAYA 338

Query: 118 QGAEL 122
           + + L
Sbjct: 339 KSSAL 343


>gi|163801385|ref|ZP_02195284.1| ribonucleoside-diphosphate reductase 1, beta subunit [Vibrio sp.
           AND4]
 gi|159174874|gb|EDP59674.1| ribonucleoside-diphosphate reductase 1, beta subunit [Vibrio sp.
           AND4]
          Length = 310

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 16/129 (12%)

Query: 2   RDESLHLNFG---IDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
           RDE LH +F       + Q K+          QQ+   +  EA  +E  +  E +P   +
Sbjct: 190 RDEGLHFSFSALLFKTLGQGKVT---------QQEFEEICREAVSIEKEFVTEALPVDLI 240

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ- 117
           G+NA    QY++  A+      G  P F  +ENPF +M  ++D++ + NFFE RVTEY+ 
Sbjct: 241 GMNAELMCQYIEHTADVIADLFGFNPAFG-SENPFDYM-RLLDMEGKTNFFEKRVTEYKR 298

Query: 118 -QGAELKWD 125
            Q  +L +D
Sbjct: 299 PQDRQLSFD 307


>gi|157952945|ref|YP_001497837.1| hypothetical protein NY2A_B641R [Paramecium bursaria Chlorella
           virus NY2A]
 gi|155123172|gb|ABT15040.1| hypothetical protein NY2A_B641R [Paramecium bursaria Chlorella
           virus NY2A]
          Length = 324

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  FG       ++    L  K   +  + ++ EA   E  +  + +P   +G+N
Sbjct: 200 RDEGLHQQFG-------ELMYSKLQNKLSFETIKQIIMEAVTNEKEFICDAIPCSMIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           A    QY++F+A+R    +G E ++  ++NPF +M E+I L+ + NFFE RV++YQ+
Sbjct: 253 ADLMNQYIEFVADRIFTALGYEKVYN-SKNPFAFM-ELISLEGKTNFFEKRVSDYQR 307


>gi|317012862|gb|ADU83470.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Lithuania75]
          Length = 341

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|260950985|ref|XP_002619789.1| hypothetical protein CLUG_00948 [Clavispora lusitaniae ATCC 42720]
 gi|238847361|gb|EEQ36825.1| hypothetical protein CLUG_00948 [Clavispora lusitaniae ATCC 42720]
          Length = 419

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE LH +F   + + +    NP +  K        ++ EA  +E  Y  + +P   +G+
Sbjct: 289 RDEGLHTDFACLLFSHLNNRPNPAIVEK--------IITEAVTIEKEYFTDALPASLLGM 340

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N     QY++F+A+R    +G + ++  T NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 341 NCDLMCQYVEFVADRLLVALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 398


>gi|321476700|gb|EFX87660.1| hypothetical protein DAPPUDRAFT_306462 [Daphnia pulex]
          Length = 378

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++   +++ A  +E  +  + +P   +G+N
Sbjct: 251 RDEGLHTDFACVMFK-------HLVNKPPKERIIEIINNAVKIEQEFLTDALPVEMIGMN 303

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R   ++G   L+  +ENPF +M E I L+ + NFFE +V EYQ+  
Sbjct: 304 CRLMRQYIEFVADRLLLELGCTKLYN-SENPFDFM-EHISLEGKTNFFEKKVGEYQKAG 360


>gi|21492474|ref|NP_659593.1| Ribonucleotide reductase, small subunit [Sheeppox virus]
          Length = 321

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K    +       +    ++ EA  +E  +    +P   +G+N
Sbjct: 196 RDEGLHCDFACLIFKHLKYPPSN-------EIITIIIKEAVSIEKEFLTNIIPVKLIGMN 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++FIA+R   ++G + +F  + NPF +M E I L+ + NFFE RV+EYQ+
Sbjct: 249 CDLMSQYIEFIADRLLLELGCDKVF-MSINPFDFM-ENISLEGKTNFFEKRVSEYQK 303


>gi|270000178|gb|ACZ57936.1| m015L [Myxoma virus]
          Length = 103

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 55/88 (62%), Gaps = 2/88 (2%)

Query: 31  QQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90
           +++  +++ EA ++E  +  E +P   +G+N     QY++F+A+R   ++G   +F  T 
Sbjct: 1   EERVASIIKEAVVIEQRFLTEALPVRLIGMNCELMCQYIEFVADRLIAELGYSKIFSAT- 59

Query: 91  NPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           NPF +M E I L+ + NFFE RV++YQ+
Sbjct: 60  NPFDFM-ENISLEGKTNFFEKRVSDYQR 86


>gi|115387427|ref|XP_001211219.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
           terreus NIH2624]
 gi|114195303|gb|EAU37003.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
           terreus NIH2624]
          Length = 401

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q    ++ EA  +E  +  + +P   +G+N
Sbjct: 267 RDEGLHTDFACLLFS-------HLNNRPSKQVVEDIIVEAVAIEKEFLTDALPVALLGMN 319

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G    F  T NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 320 SKLMCQYIEFVADRLLVALGNNKYFHST-NPFDFM-ESISLAGKTNFFEKRVGDYQKAG 376


>gi|1808636|emb|CAA64118.1| G4L protein [Cowpox virus]
          Length = 319

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  ++++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVKSIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|268575178|ref|XP_002642568.1| C. briggsae CBR-RNR-2 protein [Caenorhabditis briggsae]
 gi|187023588|emb|CAP37241.1| CBR-RNR-2 protein [Caenorhabditis briggsae AF16]
          Length = 365

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 64/117 (54%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  Q++   ++ +A  +E  +  E +P   +G+N
Sbjct: 240 RDEGLHRDFACLLYSMLQ-------NKLSQERIFEIIRDAVAIEQEFLTEALPVDMIGMN 292

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+    ++G + L+   +NPF +M E I +  + NFFE RV+EYQ+
Sbjct: 293 CRLMSQYIEFVADHLLQELGCDKLYN-VKNPFDFM-ENISIDGKTNFFEKRVSEYQR 347


>gi|297745764|emb|CBI15820.3| unnamed protein product [Vitis vinifera]
          Length = 269

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           R E LH +F   + + ++ + P  W     QK   ++HEA  +E  +  E +P   +G+ 
Sbjct: 141 RYEGLHCDFACLLYSLLQKQLP--W-----QKVHHIVHEAMEIETQFICEALPCALIGMK 193

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A     Y++F+ +R    +G E  +   ENPF WM E I L+   NFF+ R+ +YQ+ +
Sbjct: 194 ATLMSHYIKFVVDRLLVALGYERKYN-VENPFDWM-EFIFLQGNANFFQRRMGDYQKAS 250


>gi|108563454|ref|YP_627770.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori HPAG1]
 gi|107837227|gb|ABF85096.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter
           pylori HPAG1]
          Length = 341

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  +         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|302682638|ref|XP_003031000.1| hypothetical protein SCHCODRAFT_57055 [Schizophyllum commune H4-8]
 gi|300104692|gb|EFI96097.1| hypothetical protein SCHCODRAFT_57055 [Schizophyllum commune H4-8]
          Length = 362

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   ++  ++   PH       +    ++ EA  +E  +  + +P   +G+N
Sbjct: 238 RDEGMHTDFACLLLTHMR-RRPH------PEVIEMIIKEAVAIEKEFLTDALPVSLIGMN 290

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G + ++  T NPF +M ++I L+ + NFFE RV++Y+  A
Sbjct: 291 ADLMCQYIEFVADRLLVALGNDKVWNAT-NPFDFM-DMISLQGKTNFFEKRVSDYKIAA 347


>gi|156386903|ref|XP_001634150.1| predicted protein [Nematostella vectensis]
 gi|156221230|gb|EDO42087.1| predicted protein [Nematostella vectensis]
          Length = 384

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +   +L  K  ++  R ++ +A ++E  +    +P   +G+N
Sbjct: 259 RDEGLHCDFAC-------LMYKYLVNKPDEETVRGIIKDAVVIEQEFLTSALPVKLIGMN 311

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +  + ++   ENPF +M E I L+ + NF+E RV EYQ+  
Sbjct: 312 CALMRQYIEFVADRLLVALNCQKVYN-VENPFDFM-ENISLEGKTNFYEKRVGEYQKSG 368


>gi|39977011|ref|XP_369893.1| hypothetical protein MGG_06408 [Magnaporthe oryzae 70-15]
 gi|145016179|gb|EDK00669.1| hypothetical protein MGG_06408 [Magnaporthe oryzae 70-15]
          Length = 403

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +    P+      ++  + ++ +A  +E  +  E +P   +G+N
Sbjct: 260 RDEGLHTDFACLLFSLLN-NRPN------KEVVKEIVVDAVKIEQEFLTEALPCALLGMN 312

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A   +QY++F+A+R    +G E +++ T NPF +M E I L  + NFFE RV EYQ+  
Sbjct: 313 ANLMKQYIEFVADRLLVALGNEKVYRAT-NPFDFM-ENISLGGKTNFFEKRVGEYQKAG 369


>gi|308490921|ref|XP_003107652.1| hypothetical protein CRE_13354 [Caenorhabditis remanei]
 gi|308250521|gb|EFO94473.1| hypothetical protein CRE_13354 [Caenorhabditis remanei]
          Length = 147

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +        L  K  Q++   ++ +A  +E  +  E +P   +G+N
Sbjct: 22  RDEGLHRDFACLLYSM-------LQNKLTQERIFEIIKDAVCIEQEFLTEALPVDMIGMN 74

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+    ++G + L+   +NPF +M E I +  + NFFE RV+EYQ+
Sbjct: 75  CRLMSQYIEFVADHLLAELGCDKLYN-VKNPFDFM-ENISIDGKTNFFEKRVSEYQR 129


>gi|261839822|gb|ACX99587.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori 52]
          Length = 341

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  +         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|207092116|ref|ZP_03239903.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori HPKX_438_AG0C1]
          Length = 341

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  +         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|68304258|ref|YP_249726.1| RR2 [Chrysodeixis chalcites nucleopolyhedrovirus]
 gi|67973087|gb|AAY84053.1| RR2 [Chrysodeixis chalcites nucleopolyhedrovirus]
          Length = 318

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 6/117 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F     N+   E   L     + K  +M  EA  +E  +    +P   +G+N
Sbjct: 194 RDEGLHTDFACLYYNKYIPEKNKLS----KTKVLSMFVEAVDIEKDFFTNALPVAMLGMN 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           + S  +Y++F+A+R   ++G +  F  T NPF +M+  I L+ + NFFE RV EY++
Sbjct: 250 SQSMCEYIEFVADRLLFELGYDKHFN-TANPFEFMNN-ISLEGKTNFFEKRVGEYKR 304


>gi|15644992|ref|NP_207162.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori 26695]
 gi|2500210|sp|P55983|RIR2_HELPY RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2313466|gb|AAD07432.1| ribonucleoside diphosphate reductase, beta subunit (nrdB)
           [Helicobacter pylori 26695]
          Length = 341

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  +         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|317182342|dbj|BAJ60126.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori F57]
          Length = 341

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  +         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|18640102|ref|NP_570176.1| SPV016 ribonucleotide reductase, small subunit [Swinepox virus]
 gi|18448509|gb|AAL69755.1| SPV016 ribonucleotide reductase, small subunit [Swinepox virus]
          Length = 320

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++   +++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSKEVITSIIIDAVNIEKEFLTVAIPVDLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G E +F    NPF +M E I L+ + NFFE RV+EYQ+
Sbjct: 248 CCLMSQYIEFVADRLLTELGCEKVFN-VYNPFSFM-EYISLEGKTNFFERRVSEYQK 302


>gi|299472857|emb|CBN80426.1| EsV-1-128 [Ectocarpus siliculosus]
          Length = 419

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH    + +         HL  K  Q++   +   A  +E  +    +P   +G++
Sbjct: 294 RDEGLHATASVLIYK-------HLRNKLPQERVHEIFEHAVSVECEFISSALPVALIGIS 346

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y++F+A+   +Q+G + ++    NPF WM ++I L+ + NFFE RV EY +   
Sbjct: 347 EKSMTEYIKFVADYWLNQLGYDKVYN-CANPFEWM-DMISLQGKTNFFENRVAEYSKPGV 404

Query: 122 L 122
           L
Sbjct: 405 L 405


>gi|308490981|ref|XP_003107682.1| CRE-RNR-2 protein [Caenorhabditis remanei]
 gi|308250551|gb|EFO94503.1| CRE-RNR-2 protein [Caenorhabditis remanei]
          Length = 377

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 64/117 (54%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  Q++   ++ +A  +E  +  E +P   +G+N
Sbjct: 252 RDEGLHRDFACLLYSMLQ-------NKLTQERIFEIIRDAVCIEQEFLTEALPVDMIGMN 304

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+    ++G + L+   +NPF +M E I +  + NFFE RV+EYQ+
Sbjct: 305 CRLMSQYIEFVADHLLAELGCDKLYN-VKNPFDFM-ENISIDGKTNFFEKRVSEYQR 359


>gi|146090970|ref|XP_001466408.1| ribonucleoside-diphosphate reductase small chain [Leishmania
           infantum JPCM5]
 gi|134070770|emb|CAM69127.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania infantum JPCM5]
          Length = 388

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + N H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 261 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 314

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  ++ T+ PF +M E+I L+ + NFFE +V EYQ+  
Sbjct: 315 AELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAG 371


>gi|331245491|ref|XP_003335382.1| ribonucleoside-diphosphate reductase subunit M2 [Puccinia graminis
           f. sp. tritici CRL 75-36-700-3]
 gi|309314372|gb|EFP90963.1| ribonucleoside-diphosphate reductase subunit M2 [Puccinia graminis
           f. sp. tritici CRL 75-36-700-3]
          Length = 380

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   ++   PH          + ++ +A  +E  +  + +P   +G+N
Sbjct: 243 RDEGLHTDFACLLFTHLE-RRPH------PDTVQAIIAQAVEIEKEFLSDALPCKLIGMN 295

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  +  T NPF +M E+I L  + NFFE RV++Y +  
Sbjct: 296 ADLMCQYIEFVADRLLVALGNEKFYNAT-NPFDFM-EMISLSGKTNFFEKRVSDYAKAG 352


>gi|146090952|ref|XP_001466403.1| ribonucleoside-diphosphate reductase small chain [Leishmania
           infantum JPCM5]
 gi|321399462|emb|CBZ08664.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania infantum JPCM5]
          Length = 392

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + N H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 265 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  ++ T+ PF +M E+I L+ + NFFE +V EYQ+  
Sbjct: 319 AELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAG 375


>gi|332971065|gb|EGK10035.1| ribonucleotide-diphosphate reductase beta subunit [Desmospora sp.
           8437]
          Length = 342

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 2/119 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH+   + +  ++  E P L T+E +         A  LEI +    +   F G+ 
Sbjct: 214 RDEQLHVRLFVQIYRELLEEIPELNTEENRNFVTESFRRAAELEIRWGETVLGDRFDGIR 273

Query: 62  APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
                 Y++F+AN+R H++G E P   Y +NP  W+    D+ + K +FFE +  +Y +
Sbjct: 274 PDELRAYIRFMANKRAHELGAERPFAGYRKNPMRWVIAYQDVNRGKQDFFEGKSRQYSK 332


>gi|304321610|ref|YP_003855253.1| ribonucleoside-diphosphate reductase subunit beta [Parvularcula
           bermudensis HTCC2503]
 gi|303300512|gb|ADM10111.1| ribonucleoside-diphosphate reductase, beta subunit [Parvularcula
           bermudensis HTCC2503]
          Length = 340

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    + + ++   E   L T                LE  +       G V G
Sbjct: 197 IRDESLHCEGMVRLFHEFARETGAL-TPAVADDIVDCCKTVVDLEDKFIELAFEAGEVEG 255

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     + Y++ IA+ R  Q+GL P+F    +P PW+ E+++  +  NFFE R TEY +G
Sbjct: 256 MTPDDIKAYIRHIADWRLSQLGLPPVFAADNHPLPWLREILNGVEHANFFEARATEYSKG 315

Query: 120 A 120
           A
Sbjct: 316 A 316


>gi|89097912|ref|ZP_01170799.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           NRRL B-14911]
 gi|89087414|gb|EAR66528.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           NRRL B-14911]
          Length = 353

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 4/118 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH++  + +  +I  E P   TKE  + + +   EA  LEI +A   +     G+ 
Sbjct: 224 RDEQLHVDLFVKIFREILDEYPEQNTKELAEFAESTFREAAYLEIEWARSIIGDKISGIL 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS--EVIDLKKEKNFFETRVTEY 116
               E+Y++F AN R +Q+G    F+ +  NP  W+   E +DL K  +FFE +  +Y
Sbjct: 284 IGDVEEYIRFYANVRSNQLGFNRPFEGSRTNPLRWIKAYEEVDLGK-SDFFEQKPRQY 340


>gi|291562343|emb|CBL41159.1| Ribonucleotide reductase, beta subunit [butyrate-producing
           bacterium SS3/4]
          Length = 346

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ E P L+T    Q  R M+ E    EIA+ H  +     GLN
Sbjct: 218 RDENTHLWLFRNIITELQKEQPELFTAGSVQALREMMREGVEQEIAWGHYVIGDDIPGLN 277

Query: 62  APSCEQYMQFIANRRCHQIG---LEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N R   +G   L P F+       W+S+  D    K +FFE R T Y 
Sbjct: 278 RQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVKTDFFEARSTAYA 337

Query: 118 QGAEL 122
           +   L
Sbjct: 338 KSTAL 342


>gi|217034470|ref|ZP_03439882.1| hypothetical protein HP9810_890g15 [Helicobacter pylori 98-10]
 gi|216943072|gb|EEC22549.1| hypothetical protein HP9810_890g15 [Helicobacter pylori 98-10]
 gi|317177841|dbj|BAJ55630.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori F16]
          Length = 341

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  +         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIESLWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|317009697|gb|ADU80277.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori India7]
          Length = 341

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  +         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEALWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|289449785|ref|YP_003474451.1| ribonucleoside-diphosphate reductase subunit beta [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
 gi|289184332|gb|ADC90757.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
          Length = 400

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 8/127 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++++++++E P L++ E  ++ R M+ E    EIA+ H  +     GL 
Sbjct: 272 RDENTHLWLFRNILSELQVERPDLFSAELVEEYRAMIKEGAEQEIAWGHYVLGDDIPGLT 331

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKKEK-NFFETRVTE 115
                 Y+Q++AN R   +G    + Y +N        W+S+  D    K +FFE + T 
Sbjct: 332 RQMVTDYIQYLANLRAQNLGFA--YIYPDNHSEPASMSWISQYSDANMVKTDFFEAKSTA 389

Query: 116 YQQGAEL 122
           Y +   +
Sbjct: 390 YAKSTAM 396


>gi|208434985|ref|YP_002266651.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter
           pylori G27]
 gi|208432914|gb|ACI27785.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter
           pylori G27]
          Length = 341

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  +         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEALWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|217032591|ref|ZP_03438080.1| hypothetical protein HPB128_159g17 [Helicobacter pylori B128]
 gi|298735909|ref|YP_003728434.1| ribonucleoside-diphosphate reductase subunit beta [Helicobacter
           pylori B8]
 gi|216945727|gb|EEC24352.1| hypothetical protein HPB128_159g17 [Helicobacter pylori B128]
 gi|298355098|emb|CBI65970.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter
           pylori B8]
          Length = 341

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  +         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEALWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|255037048|ref|YP_003087669.1| Ribonucleoside-diphosphate reductase [Dyadobacter fermentans DSM
           18053]
 gi|254949804|gb|ACT94504.1| Ribonucleoside-diphosphate reductase [Dyadobacter fermentans DSM
           18053]
          Length = 331

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F   +  +      H+  +  Q++   ++ +A  +E  +  E +P   +G+N
Sbjct: 201 RDEGLHCEFACLLYTK------HILNQLPQERVIEIMLDAVEIEKEFVSEALPVSLIGMN 254

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A   +QY+++IA+    ++G    F  + NPF +M E+I L  + NFFE RV EYQ+  
Sbjct: 255 ADLMKQYIEYIADFWLERLGCPKQFG-SANPFDFM-ELISLPGKTNFFEKRVGEYQKAG 311


>gi|156545974|ref|XP_001606963.1| PREDICTED: similar to ENSANGP00000013211 [Nasonia vitripennis]
          Length = 388

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  K  +++  +++ +A  +E  +  + +P   +G+N
Sbjct: 261 RDEGLHCDFACLMFK-------HIVQKPSEERVISIIKDAVTIEQEFLTDALPVEMIGMN 313

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G   ++  +ENPF +M E I L+ + NFFE +V EYQ+
Sbjct: 314 CRLMCQYIEFVADRLLGELGCPKVYN-SENPFDFM-EHISLEGKTNFFEKKVGEYQK 368


>gi|50286273|ref|XP_445565.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524870|emb|CAG58476.1| unnamed protein product [Candida glabrata]
          Length = 400

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K   +    ++ EA  +E  Y  + +P   +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLNHKPDPEVVERIVTEAVEIEQRYFLDALPVALLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R     G + ++   ENPF +M E I L  + NFFE RV++YQ+  
Sbjct: 324 AQLMNQYVEFVADRLLVAFGNKKVYN-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380


>gi|226294144|gb|EEH49564.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides
           brasiliensis Pb18]
          Length = 325

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++    H  + E  QK   ++ EA  +E  +  + +P   +G+N
Sbjct: 186 RDEGLHTDFACLLFSHLR----HRPSPEAVQK---IITEAVAIEQEFLTDALPCALLGMN 238

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G + ++  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 239 AKLMCQYIEFVADRLLVALGNKKVYNST-NPFDFMDN-ISLTGKTNFFEKRVGDYQKAG 295


>gi|225684487|gb|EEH22771.1| ribonucleoside-diphosphate reductase small chain A
           [Paracoccidioides brasiliensis Pb03]
          Length = 413

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++    H  + E  QK   ++ EA  +E  +  + +P   +G+N
Sbjct: 274 RDEGLHTDFACLLFSHLR----HRPSPEAVQK---IITEAVAIEQEFLTDALPCALLGMN 326

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G + ++  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 327 AKLMCQYIEFVADRLLVALGNKKVYNST-NPFDFMDN-ISLTGKTNFFEKRVGDYQKAG 383


>gi|544843|gb|AAB29634.1| C8L product [variola virus VAR, India-1967, Peptide, 333 aa]
          Length = 333

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 209 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + YM+F+A+R   ++G + ++  T NP  +M E I L+ + NFFE RV EYQ+
Sbjct: 262 CEMMKTYMEFVADRLISELGFKRIYNVT-NPSDFM-ENISLEGKTNFFEKRVGEYQK 316


>gi|157953769|ref|YP_001498660.1| hypothetical protein AR158_C579R [Paramecium bursaria Chlorella
           virus AR158]
 gi|156068417|gb|ABU44124.1| hypothetical protein AR158_C579R [Paramecium bursaria Chlorella
           virus AR158]
          Length = 324

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 70/122 (57%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  FG  + ++++ + P        +  + ++ EA   E  +  + +P   +G+N
Sbjct: 200 RDEGLHQQFGELMYSKLQNKLPF-------ETVKQIITEAVENEKEFICDAIPCRLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G E ++  ++NPF +M E+I L+ + NFFE RV++YQ+   
Sbjct: 253 SELMGQYIEFVADRIFIALGYEKVYN-SKNPFAFM-ELISLQGKTNFFEKRVSDYQRPGV 310

Query: 122 LK 123
           +K
Sbjct: 311 MK 312


>gi|313235850|emb|CBY19835.1| unnamed protein product [Oikopleura dioica]
          Length = 382

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +   H+  K  Q++   ++ +A  +E  +  + +P   +G+N
Sbjct: 251 RDEGLHTDFAC-------LMYKHMVQKPSQEQIIAIIRDAVSIEQEFLTDALPVRLIGMN 303

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               + Y++F+A+R   ++    ++K  ENPF +M E+I L+ + NFFE +V+EY +  
Sbjct: 304 CDLMKTYIEFVADRLLVELDCPKIYK-VENPFDFM-EMISLEGKTNFFEKKVSEYARAG 360


>gi|306478720|ref|NP_042072.2| Ribonucleoside-diphosphate reductase small chain [Variola virus]
 gi|464615|sp|P33799|RIR2_VAR67 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 319

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + YM+F+A+R   ++G + ++  T NP  +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYMEFVADRLISELGFKRIYNVT-NPSDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|297209|emb|CAA48969.1| C8L [Variola virus]
 gi|745144|prf||2015436AF C8L gene
          Length = 333

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 209 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + YM+F+A+R   ++G + ++  T NP  +M E I L+ + NFFE RV EYQ+
Sbjct: 262 CEMMKTYMEFVADRLISELGFKRIYNVT-NPSDFM-ENISLEGKTNFFEKRVGEYQK 316


>gi|45184688|ref|NP_982406.1| AAL136Cp [Ashbya gossypii ATCC 10895]
 gi|44980034|gb|AAS50230.1| AAL136Cp [Ashbya gossypii ATCC 10895]
          Length = 422

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K   +    ++ EA  +E  Y  + +P   +G+N
Sbjct: 292 RDEGLHTDFACLLF-------AHLNNKPDTEIVEKIITEAVEIEKRYFQDAIPVALLGMN 344

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  + NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 345 SSLMNQYVEFVADRLLVALGNKKYYNVS-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 401


>gi|190896546|gb|ACE96786.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|190896508|gb|ACE96767.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896514|gb|ACE96770.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896522|gb|ACE96774.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896540|gb|ACE96783.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896542|gb|ACE96784.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|283955349|ref|ZP_06372848.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 414]
 gi|283793109|gb|EFC31879.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 414]
          Length = 340

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+  E   K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   I L+ L+   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334


>gi|190896520|gb|ACE96773.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|313213932|emb|CBY40745.1| unnamed protein product [Oikopleura dioica]
          Length = 418

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +   H+  K  Q++   ++ +A  +E  +  + +P   +G+N
Sbjct: 287 RDEGLHTDFAC-------LMYKHMVQKPSQEQIIAIIRDAVSIEQEFLTDALPVRLIGMN 339

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               + Y++F+A+R   ++    ++K  ENPF +M E+I L+ + NFFE +V+EY +  
Sbjct: 340 CDLMKTYIEFVADRLLVELDCPKIYK-VENPFDFM-EMISLEGKTNFFEKKVSEYARAG 396


>gi|190896510|gb|ACE96768.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896556|gb|ACE96791.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896562|gb|ACE96794.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|67515571|ref|XP_657671.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4]
 gi|40746089|gb|EAA65245.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4]
 gi|259489743|tpe|CBF90266.1| TPA: Ribonucleotide reductase [Source:UniProtKB/TrEMBL;Acc:Q9HEW8]
           [Aspergillus nidulans FGSC A4]
          Length = 406

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  ++    ++ EA  +E  +  + +P   +G+N
Sbjct: 269 RDEGLHTDFACLLFS-------HLNWRPSKKVVEDIIVEAVAIEKEFLTDALPCALLGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G +  F  T NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 322 AKLMCQYIEFVADRLLVALGNKKYFNAT-NPFDFM-ESISLAGKTNFFEKRVGDYQKAG 378


>gi|295670491|ref|XP_002795793.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides
           brasiliensis Pb01]
 gi|226284878|gb|EEH40444.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides
           brasiliensis Pb01]
          Length = 325

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++    H  + E  QK   ++ EA  +E  +  + +P   +G+N
Sbjct: 186 RDEGLHTDFACLLFSHLR----HRPSPEAVQK---IITEAVAIEQEFLTDALPCALLGMN 238

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G + ++  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 239 AKLMCQYIEFVADRLLVALGNKKVYNST-NPFDFMDN-ISLTGKTNFFEKRVGDYQKAG 295


>gi|57237291|ref|YP_178304.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni RM1221]
 gi|148926379|ref|ZP_01810063.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|57166095|gb|AAW34874.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni RM1221]
 gi|145844771|gb|EDK21876.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|315057661|gb|ADT71990.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Campylobacter jejuni subsp. jejuni S3]
          Length = 340

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+  E   K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   I L+ L+   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334


>gi|86149605|ref|ZP_01067835.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|86151167|ref|ZP_01069382.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|86153704|ref|ZP_01071907.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|88597173|ref|ZP_01100408.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|121613260|ref|YP_999944.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|157414529|ref|YP_001481785.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni 81116]
 gi|167004901|ref|ZP_02270659.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|218561895|ref|YP_002343674.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|283955655|ref|ZP_06373148.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 1336]
 gi|315123818|ref|YP_004065822.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           jejuni subsp. jejuni ICDCCJ07001]
 gi|85839873|gb|EAQ57132.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|85841514|gb|EAQ58761.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|85842665|gb|EAQ59877.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|87250215|gb|EAQ73173.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|88190234|gb|EAQ94208.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|112359601|emb|CAL34386.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|157385493|gb|ABV51808.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni 81116]
 gi|283792880|gb|EFC31656.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 1336]
 gi|284925507|gb|ADC27859.1| ribonucleoside-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni IA3902]
 gi|307747171|gb|ADN90441.1| Ribonucleoside-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni M1]
 gi|315017540|gb|ADT65633.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           jejuni subsp. jejuni ICDCCJ07001]
 gi|315928159|gb|EFV07477.1| ribonucleotide reductase, small chain family protein [Campylobacter
           jejuni subsp. jejuni DFVF1099]
 gi|315932030|gb|EFV10983.1| ribonucleotide reductase, small chain family protein [Campylobacter
           jejuni subsp. jejuni 327]
          Length = 340

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+  E   K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   I L+ L+   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334


>gi|190896550|gb|ACE96788.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|190896516|gb|ACE96771.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|205356539|ref|ZP_03223302.1| ribonucleoside diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|205345544|gb|EDZ32184.1| ribonucleoside diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni CG8421]
          Length = 340

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+  E   K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   I L+ L+   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334


>gi|190896532|gb|ACE96779.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896554|gb|ACE96790.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|190896538|gb|ACE96782.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896548|gb|ACE96787.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896558|gb|ACE96792.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|190896564|gb|ACE96795.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|190896552|gb|ACE96789.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|254572986|ref|XP_002493602.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
           complex [Pichia pastoris GS115]
 gi|238033401|emb|CAY71423.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
           complex [Pichia pastoris GS115]
 gi|328354568|emb|CCA40965.1| ribonucleoside-diphosphate reductase subunit M2 [Pichia pastoris
           CBS 7435]
          Length = 400

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  ++    ++ EA  +E  Y  + +P   +G+N
Sbjct: 271 RDEGLHTDFACLLFS-------HLNNRASEEIVEKIITEAVEIEKRYFTDALPVSLLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G + ++    NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 324 CSLMCQYVEFVADRLLVALGNKKVYN-VNNPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380


>gi|154340038|ref|XP_001565976.1| ribonucleoside-diphosphate reductase small chain [Leishmania
           braziliensis MHOM/BR/75/M2904]
 gi|134063294|emb|CAM45500.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 388

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + N H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 261 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 314

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFFE +V EYQ+  
Sbjct: 315 AELMAQYIEFVADRLLVSLGEEKHYNATQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAG 371


>gi|308809930|ref|XP_003082274.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
           tauri]
 gi|116060742|emb|CAL57220.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
           tauri]
          Length = 382

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/123 (33%), Positives = 61/123 (49%), Gaps = 17/123 (13%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLH----EATLLEIAYAHETMPKGF 57
           RDE LH +F   +   +  +NP          S   LH    +A  +E  +  + +    
Sbjct: 256 RDEGLHCDFACLLYGML--QNP---------LSEATLHHIVGDAVKIEKEFVCDALSCSL 304

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
           VG+NA     Y++F+A+R   Q+G   LF    NPF WM E+I L+ + NFFE RV +YQ
Sbjct: 305 VGMNADMMSTYIEFVADRLLIQLGASKLFNAV-NPFDWM-ELISLQGKANFFEHRVDQYQ 362

Query: 118 QGA 120
           +  
Sbjct: 363 KAG 365


>gi|11878241|gb|AAG40862.1| ribonucleotide reductase [Emericella nidulans]
          Length = 406

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  ++    ++ EA  +E  +  + +P   +G+N
Sbjct: 269 RDEGLHTDFACLLFS-------HLNWRPSKKVVEDIIVEAVAIEKEFLTDALPCALLGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G +  F  T NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 322 AKLMCQYIEFVADRLLVALGNKEYFNAT-NPFDFM-ESISLAGKTNFFEKRVGDYQKAG 378


>gi|145249942|ref|XP_001401310.1| ribonucleoside-diphosphate reductase small chain [Aspergillus niger
           CBS 513.88]
 gi|134081995|emb|CAK46680.1| unnamed protein product [Aspergillus niger]
          Length = 396

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q    ++ EA  +E  +  + +P   +G+N
Sbjct: 263 RDEGLHTDFACLLFS-------HLNNRPSKQVVEDIIVEAVGIEQEFLTDALPVALLGMN 315

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  T NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 316 SKLMCQYIEFVADRLLVALGNKKYYNAT-NPFDFM-ESISLAGKTNFFEKRVGDYQKAG 372


>gi|110763195|ref|XP_397443.3| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 isoform
           1 [Apis mellifera]
          Length = 384

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   I ++ P        ++  +++ +A  +E  +  + +P   +G+N
Sbjct: 259 RDEGLHCDFACLMFKHI-VQKPSC------ERVTSIIKDAVKIEQEFLTDALPVEMIGMN 311

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G + ++  +ENPF +M E I L+ + NFFE +V EYQ+
Sbjct: 312 CKLMCQYIEFVADRLLVELGCKKIY-MSENPFDFM-EHISLEGKTNFFEKKVGEYQK 366


>gi|225561749|gb|EEH10029.1| ribonucleotide reductase M2 B [Ajellomyces capsulatus G186AR]
 gi|240275354|gb|EER38868.1| ribonucleoside-diphosphate reductase subunit small [Ajellomyces
           capsulatus H143]
 gi|325091193|gb|EGC44503.1| ribonucleoside-diphosphate reductase subunit small [Ajellomyces
           capsulatus H88]
          Length = 413

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   +    ++ EA  +E  +  + +P   +G+N
Sbjct: 274 RDEGLHTDFACLLFS-------HLRHRPSPEAVEKIITEAVTIEQEFLSDALPVALLGMN 326

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G + ++  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 327 AKLMCQYIEFVADRLLVALGNKKVYNST-NPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 383


>gi|154337607|ref|XP_001565036.1| ribonucleoside-diphosphate reductase small chain [Leishmania
           braziliensis MHOM/BR/75/M2904]
 gi|134062075|emb|CAM45178.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 392

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + N H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 265 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFFE +V EYQ+  
Sbjct: 319 AELMAQYIEFVADRLLVSLGEEKHYNATQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAG 375


>gi|314055235|ref|YP_004063573.1| ribonucleoside-diphosphate reductase small subunit-possible host
           origin [Ostreococcus tauri virus 2]
 gi|313575126|emb|CBI70139.1| ribonucleoside-diphosphate reductase small subunit-possible host
           origin [Ostreococcus tauri virus 2]
          Length = 408

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F +++   ++        +   +    ++ EA  +E  +  + +P   +G+N
Sbjct: 287 RDEGLHQEFAVELFKTLR-------NRPTTETIHAIVKEAVEIEKGFILDALPCNLIGMN 339

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           +    +Y++++++R   Q+G+ P++   +NPF +M E I L  + NFFE RV +Y +
Sbjct: 340 SEKMSEYIEYVSDRLLKQVGVPPIWN-AKNPFDFM-ENISLDGKTNFFEKRVGDYGK 394


>gi|170089003|ref|XP_001875724.1| ribonucleotide reductase, beta subunit [Laccaria bicolor S238N-H82]
 gi|164648984|gb|EDR13226.1| ribonucleotide reductase, beta subunit [Laccaria bicolor S238N-H82]
          Length = 422

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + + +K   PH       +  + ++ EA  +E  +  + +P   +G+N
Sbjct: 281 RDEGMHTDFACLLFSHLK-RRPH------PEVVKHIIVEAVKIEQEFLTDALPVKLIGMN 333

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  +  T NPF +M ++I L+ + NFFE RV++Y +  
Sbjct: 334 ADLMCQYIEFVADRLLVSLGNEKHYNKT-NPFDFM-DMISLQGKTNFFEKRVSDYSKAG 390


>gi|17974949|ref|NP_536463.1| C10L [Monkeypox virus Zaire-96-I-16]
 gi|17529816|gb|AAL40494.1|AF380138_36 C10L [Monkeypox virus Zaire-96-I-16]
 gi|51342196|gb|AAU01240.1| MPXV-WRAIR030 [Monkeypox virus]
 gi|58220500|gb|AAW67788.1| MPXV-SL-030 [Monkeypox virus]
 gi|59858836|gb|AAX09131.1| MPXV-COP-030 [Monkeypox virus]
 gi|68448710|gb|AAY96833.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|68448912|gb|AAY97034.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|68449113|gb|AAY97234.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|68449313|gb|AAY97433.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|68449512|gb|AAY97631.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|300872658|gb|ADK39060.1| ribonucleotide reductase small subunit [Monkeypox virus]
          Length = 319

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R ++  A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRFIITNAVSIEQEFLTVALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|3220181|gb|AAC23560.1| ribonucleotide reductase M2 subunit [Leishmania amazonensis]
          Length = 354

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + N H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 227 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFFE +V EYQ+  
Sbjct: 281 AELMAQYIEFVADRLLVSLGEEKHYNSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAG 337


>gi|322493026|emb|CBZ28311.1| ribonucleoside-diphosphate reductase small chain,putative
           [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 388

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + N H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 261 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 314

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFFE +V EYQ+  
Sbjct: 315 AELMAQYIEFVADRLLVSLGEEKHYNSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAG 371


>gi|261189551|ref|XP_002621186.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
           dermatitidis SLH14081]
 gi|239591422|gb|EEQ74003.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
           dermatitidis SLH14081]
 gi|239613047|gb|EEQ90034.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
           dermatitidis ER-3]
 gi|327356917|gb|EGE85774.1| ribonucleotide reductase M2 B [Ajellomyces dermatitidis ATCC 18188]
          Length = 413

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   +    ++ EA  +E  +  + +P   +G+N
Sbjct: 274 RDEGLHTDFACLLFS-------HLRHRPSPEAVERIITEAVTIEQEFLSDALPVALLGMN 326

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G + ++  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 327 AKLMCQYIEFVADRLLVALGNKKVYNST-NPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 383


>gi|168015485|ref|XP_001760281.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688661|gb|EDQ75037.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 330

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +         K  + +   ++ EA ++E  +  E +    VG+N
Sbjct: 200 RDEGLHCDFACLLYTLLN-------NKLSEDRVYEIVCEAVVIEQEFVCEALSCDLVGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                +Y+ F+A+R    +G    +  + NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 253 KTLMSEYIDFVADRLLVSLGYPKKYN-SHNPFDWM-ELISLQGKTNFFEKRVGEYQKAS 309


>gi|323098642|gb|ADX22879.1| ribonucleotide reductase small subunit [Monkeypox virus]
          Length = 319

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R ++  A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRFIITNAVSIEQEFLTVALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|307192386|gb|EFN75622.1| Ribonucleoside-diphosphate reductase subunit M2 [Harpegnathos
           saltator]
          Length = 344

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   + I+ P        ++ +T++ +A  +E  +  + +P   +G+N
Sbjct: 214 RDEGLHCDFACLMFKHV-IQKPSF------ERVKTIIMDAVEIEKEFLTQALPVKLIGMN 266

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                 Y++F+A+R    +G + ++  +ENPF +M + I L+ + NFFE +V EY++
Sbjct: 267 CTLMCTYIEFVADRLFVALGFDKVYN-SENPFSFM-DFISLEGKTNFFEKKVGEYKK 321


>gi|323098445|gb|ADX22683.1| ribonucleotide reductase small subunit [Monkeypox virus]
          Length = 319

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R ++  A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRFIITNAVSIEQEFLTVALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|322491821|emb|CBZ27094.1| ribonucleoside-diphosphate reductase small chain,putative
           [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 392

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + N H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 265 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFFE +V EYQ+  
Sbjct: 319 AELMAQYIEFVADRLLVSLGEEKHYNSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAG 375


>gi|13242599|ref|NP_077613.1| EsV-1-128 [Ectocarpus siliculosus virus 1]
 gi|13177402|gb|AAK14546.1|AF204951_128 EsV-1-128 [Ectocarpus siliculosus virus 1]
          Length = 419

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH    + +   +K   P       +++   +   A  +E  +    +P   +G++
Sbjct: 294 RDEGLHATASVLIYKHLKNRLP-------RERVHEIFKHAVSVECEFISSALPVALIGIS 346

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y++F+A+   +Q+G + ++    NPF WM ++I L+ + NFFE RV EY +   
Sbjct: 347 EKSMTEYIKFVADYWLNQLGYDKVYN-CANPFEWM-DMISLQGKTNFFENRVAEYSKPGV 404

Query: 122 L 122
           L
Sbjct: 405 L 405


>gi|225434341|ref|XP_002276454.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 841

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           R E LH +F   + + ++ + P  W     QK   ++HEA  +E  +  E +P   +G+ 
Sbjct: 713 RYEGLHCDFACLLYSLLQKQLP--W-----QKVHHIVHEAMEIETQFICEALPCALIGMK 765

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A     Y++F+ +R    +G E  +   ENPF WM E I L+   NFF+ R+ +YQ+ +
Sbjct: 766 ATLMSHYIKFVVDRLLVALGYERKYN-VENPFDWM-EFIFLQGNANFFQRRMGDYQKAS 822


>gi|317062933|ref|ZP_07927418.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           ulcerans ATCC 49185]
 gi|313688609|gb|EFS25444.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           ulcerans ATCC 49185]
          Length = 353

 Score = 60.8 bits (146), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 9/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +I+ ENP  +  E   +  +M  +A   EI + +  +    +G+ 
Sbjct: 225 RDELSHVVIFQHLLKEIRNENPDFFNDE---EIYSMFRKAVEQEINWTNHIIGNQILGIT 281

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
             + EQY +++AN R   IGL+P+++ + +NP+  +++  D + E     NFFE  VT Y
Sbjct: 282 EETTEQYTKWLANERLRSIGLKPIYEGFNKNPYKHLTKFADTEGEGNVKANFFEGTVTSY 341

Query: 117 QQGAELK-WD 125
              + +  WD
Sbjct: 342 NMSSSIDGWD 351


>gi|313768358|ref|YP_004062038.1| hypothetical protein MpV1_155c [Micromonas sp. RCC1109 virus MpV1]
 gi|312599054|gb|ADQ91078.1| hypothetical protein MpV1_155c [Micromonas sp. RCC1109 virus MpV1]
          Length = 388

 Score = 60.8 bits (146), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 68/128 (53%), Gaps = 13/128 (10%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F +++   ++        K   +   +++ EA  +E  +  + +P   +G+N
Sbjct: 267 RDEGLHQEFAVELFKLLR-------NKPSTETIHSIVKEAVEIEKNFILDALPCNLIGMN 319

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY----Q 117
           +    +Y++++++R   Q+G  P++  ++NPF +M E I L  + NFFE RV +Y     
Sbjct: 320 SEKMSEYIEYVSDRLLKQVGQPPIWN-SKNPFDFM-ENISLDGKTNFFEKRVGDYGKLDD 377

Query: 118 QGAELKWD 125
             AE+ +D
Sbjct: 378 DSAEIGFD 385


>gi|325475472|gb|EGC78653.1| ribonucleoside-diphosphate reductase [Treponema denticola F0402]
          Length = 351

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L+T +  +  R M+ E    EIA+ +  +     GLN
Sbjct: 223 RDENTHLWLFRSMIQELQKEEPQLFTPQNVELFRGMIREGCEQEIAWGNYVIGNDIPGLN 282

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
           +     Y+Q++ N RC  +G  P++  + E P    W+S+  +    K +FFE + T Y 
Sbjct: 283 SQMITDYIQYLGNLRCENLGFAPIYDGHKEEPQSMSWVSQYSNANLIKTDFFEAKSTAYA 342

Query: 118 QGAEL 122
           + + +
Sbjct: 343 KSSAM 347


>gi|257468678|ref|ZP_05632772.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           ulcerans ATCC 49185]
          Length = 348

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 9/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +I+ ENP  +  E   +  +M  +A   EI + +  +    +G+ 
Sbjct: 220 RDELSHVVIFQHLLKEIRNENPDFFNDE---EIYSMFRKAVEQEINWTNHIIGNQILGIT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
             + EQY +++AN R   IGL+P+++ + +NP+  +++  D + E     NFFE  VT Y
Sbjct: 277 EETTEQYTKWLANERLRSIGLKPIYEGFNKNPYKHLTKFADTEGEGNVKANFFEGTVTSY 336

Query: 117 QQGAELK-WD 125
              + +  WD
Sbjct: 337 NMSSSIDGWD 346


>gi|330921941|ref|XP_003299625.1| hypothetical protein PTT_10664 [Pyrenophora teres f. teres 0-1]
 gi|311326599|gb|EFQ92269.1| hypothetical protein PTT_10664 [Pyrenophora teres f. teres 0-1]
          Length = 410

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + + +         +  ++  R ++ EA  +E  +  + +P   +G+N
Sbjct: 267 RDEGMHTDFACLLFSLLN-------NRPSKESVRAIITEAVEIEQEFLSDALPCALLGMN 319

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G   ++  T NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 320 ATLMCQYIEFVADRLLLALGNTKVYNAT-NPFDFM-ENISLAGKTNFFEKRVGDYQKAG 376


>gi|241951066|ref|XP_002418255.1| ribonucleoside-diphosphate reductase small chain 1, putative;
           ribonucleotide reductase r2 subunit 1, putative;
           ribonucleotide reductase small subunit 1, putative
           [Candida dubliniensis CD36]
 gi|223641594|emb|CAX43555.1| ribonucleoside-diphosphate reductase small chain 1, putative
           [Candida dubliniensis CD36]
          Length = 413

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  +   +    ++ EA  +E  Y  + +P   +G+N
Sbjct: 285 RDEGLHTDFACLLF-------AHLQNRPSPEIVEKIITEAVDVEKEYFTDALPVSLLGMN 337

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G + ++  T NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 338 CNLMCQYIEFVADRLLLALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 394


>gi|68481406|ref|XP_715342.1| hypothetical protein CaO19.5801 [Candida albicans SC5314]
 gi|68481537|ref|XP_715277.1| hypothetical protein CaO19.13223 [Candida albicans SC5314]
 gi|46436893|gb|EAK96248.1| hypothetical protein CaO19.13223 [Candida albicans SC5314]
 gi|46436961|gb|EAK96315.1| hypothetical protein CaO19.5801 [Candida albicans SC5314]
 gi|238882096|gb|EEQ45734.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
           albicans WO-1]
          Length = 413

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  +   +    ++ EA  +E  Y  + +P   +G+N
Sbjct: 285 RDEGLHTDFACLLF-------AHLQNRPSPEIVERIITEAVDVEKEYFTDALPVSLLGMN 337

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G + ++  T NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 338 CNLMCQYIEFVADRLLLALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 394


>gi|325831705|ref|ZP_08164922.1| ribonucleoside-diphosphate reductase, beta subunit [Eggerthella sp.
           HGA1]
 gi|325486576|gb|EGC89025.1| ribonucleoside-diphosphate reductase, beta subunit [Eggerthella sp.
           HGA1]
          Length = 347

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ ++K E P L+T E  ++ R M+ E    EI + H  +     GLN
Sbjct: 219 RDENTHLWLFRNILLELKEEEPELFTPELVEEYRAMIKEGCEQEIRWGHYAIGDEVAGLN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y+Q++ N RC Q+G EPL++  E       W+S+  +    K +FFE R T Y 
Sbjct: 279 KQMVTDYIQYLGNLRCTQLGFEPLYEGHEREPESMSWVSQFSNANMIKTDFFEARSTAYA 338

Query: 118 QGAEL 122
           + + L
Sbjct: 339 KSSAL 343


>gi|312216546|emb|CBX96496.1| similar to ribonucleoside-diphosphate reductase subunit M2
           [Leptosphaeria maculans]
          Length = 410

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + + +        T+  ++  + ++ EA  +E  +  + +P   +G+N
Sbjct: 266 RDEGMHTDFACLLFSLLN-------TRPSKESVQAIITEAVEIEKEFLSDALPCALLGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G    +  T NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 319 ATLMCQYIEFVADRLLLSLGNTKFYNAT-NPFDFM-ENISLAGKTNFFEKRVGDYQKAG 375


>gi|215401283|ref|YP_002332587.1| ribonucleotide reductase small subunit [Helicoverpa armigera
           multiple nucleopolyhedrovirus]
 gi|198448783|gb|ACH88573.1| ribonucleotide reductase small subunit [Helicoverpa armigera
           multiple nucleopolyhedrovirus]
          Length = 313

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 8/116 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F           N  +  K   +    M  EA  +E  +  + +P   +G+N
Sbjct: 191 RDEGMHTDFAC------LYYNTRVNEKLSYETILDMFKEAVDIEKEFFTDALPVALLGMN 244

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
           A    +Y++F+A+R   Q+G +P +    NPFP+M+  I L+ + NFFE RV EY+
Sbjct: 245 ADMMCEYIEFVADRLLLQLG-QPKYYNARNPFPFMNN-ISLEGKTNFFERRVGEYK 298


>gi|22549454|ref|NP_689227.1| putative ribonucleotide reductase small subunit-like protein
           [Mamestra configurata NPV-B]
 gi|22476633|gb|AAM95039.1| putative ribonucleotide reductase small subunit-like protein
           [Mamestra configurata NPV-B]
          Length = 313

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 8/116 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F           N  +  K   +    M  EA  +E  +  + +P   +G+N
Sbjct: 191 RDEGMHTDFAC------LYYNTRVNEKLSYETILDMFKEAVDIEKEFFTDALPVALLGMN 244

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
           A    +Y++F+A+R   Q+G +P +    NPFP+M+  I L+ + NFFE RV EY+
Sbjct: 245 ADMMCEYIEFVADRLLLQLG-QPKYYNARNPFPFMNN-ISLEGKTNFFERRVGEYK 298


>gi|254796877|ref|YP_003081714.1| ribonucleoside-diphosphate reductase, beta subunit [Neorickettsia
           risticii str. Illinois]
 gi|254590113|gb|ACT69475.1| ribonucleoside-diphosphate reductase, beta subunit [Neorickettsia
           risticii str. Illinois]
          Length = 286

 Score = 60.5 bits (145), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 9/130 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTK---EFQQKSRTMLH-EATLLEIAYAHETMPKG 56
           +RDE+LH N    +     +EN     K   E ++    M+H E   +++A+    +   
Sbjct: 153 VRDETLHSNSITKLFRTFLLENDIDKLKLEAEIREICDAMVHHEDAFIDLAFEMGDVE-- 210

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
             GL A   ++Y+++IAN R  Q+G   +++   NP  W+  V++  +  NFFE + TEY
Sbjct: 211 --GLKASEVKEYIRYIANLRLKQLGFSEIYEQKVNPLLWLEAVLNTVEHTNFFENKATEY 268

Query: 117 QQGA-ELKWD 125
            + A +  WD
Sbjct: 269 SKAATKGTWD 278


>gi|328855581|gb|EGG04707.1| hypothetical protein MELLADRAFT_49061 [Melampsora larici-populina
           98AG31]
          Length = 385

 Score = 60.5 bits (145), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +      + ++ +A  +E  +  + +P   +G+N
Sbjct: 248 RDEGLHTDFACLLFS-------HLERRPHPDTVQAIISQAVEIEKEFLSDALPCKLIGMN 300

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G +  +   ENPF +M E+I L  + NFFE RV++Y +  
Sbjct: 301 ADLMCQYIEFVADRLLVALGNDKFYN-AENPFDFM-EMISLSGKTNFFEKRVSDYAKAG 357


>gi|239826135|ref|YP_002948759.1| ribonucleoside-diphosphate reductase [Geobacillus sp. WCH70]
 gi|239806428|gb|ACS23493.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. WCH70]
          Length = 346

 Score = 60.5 bits (145), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H++    +  ++  E P   T E  Q  R    +A  LEI +A+  +     G++
Sbjct: 218 RDEHIHVDLFAKIFKEVLNEYPEYNTPELAQFVRETFIKAAKLEIEWANYIIGNDIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEKNFFETRVTEYQQ 118
                 Y++F AN R HQ+G + P   Y  NP  W+   E +DL K  +FFE +  +Y +
Sbjct: 278 MHDLSAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGK-SDFFEQKSRQYTK 336


>gi|320164906|gb|EFW41805.1| ribonucleotide reductase m2 polypeptide [Capsaspora owczarzaki ATCC
           30864]
          Length = 352

 Score = 60.5 bits (145), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +         +        ++ +A  +E  +  + +P   +G+N
Sbjct: 227 RDEGLHCDFACMLFGLLN-------NRPSNADVLAIIKDAVAIEQEFLTDALPVALIGMN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R    +G E  +K  ENPF +M ++I L+ + NFFE RV EYQ+
Sbjct: 280 GGLMKTYIEFVADRLLVALGQEKHYK-VENPFDFM-DLISLQGKTNFFERRVGEYQK 334


>gi|300706309|ref|XP_002995432.1| hypothetical protein NCER_101672 [Nosema ceranae BRL01]
 gi|239604534|gb|EEQ81761.1| hypothetical protein NCER_101672 [Nosema ceranae BRL01]
          Length = 325

 Score = 60.1 bits (144), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 13/119 (10%)

Query: 2   RDESLHLNFGIDVINQIKI-ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE LH +F   ++NQ  I ++PH+           ++ EA  +E  +   ++P   +G+
Sbjct: 202 RDEGLHCDFAC-LLNQYLINKSPHI---------LDIVKEAVEIEKEFLGVSLPVNLIGM 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           N     QY++F+A+R    +GLE  +  T NPF +M E I L  + NFF+ R ++YQ+ 
Sbjct: 252 NCKLMCQYIEFVADRLLINLGLEKYYN-TLNPFDFM-ENISLVGKTNFFDKRESQYQKA 308


>gi|322795965|gb|EFZ18591.1| hypothetical protein SINV_11129 [Solenopsis invicta]
          Length = 426

 Score = 60.1 bits (144), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 64/117 (54%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   I I+ P        +  ++++ +A  +E  +  + +P   +G+N
Sbjct: 296 RDEGLHCDFACLIFKHI-IQKPSF------EHVKSIIMDAVEIEKEFLTQALPVELIGMN 348

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                 Y++F+A+R    +G E ++  +ENPF +M+  I L+ + NFFE +V EY++
Sbjct: 349 CSLMCNYIEFVADRLFVALGFEKVYN-SENPFSFMN-FISLEGKTNFFEKKVGEYKK 403


>gi|189199548|ref|XP_001936111.1| ribonucleoside-diphosphate reductase subunit M2 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187983210|gb|EDU48698.1| ribonucleoside-diphosphate reductase subunit M2 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 410

 Score = 60.1 bits (144), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + + +         +   ++ R ++ EA  +E  +  + +P   +G+N
Sbjct: 267 RDEGMHTDFACLLFSLLN-------NRPSNEEVRAIITEAVEIEQEFLSDALPCALLGMN 319

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G   ++  T NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 320 ATLMCQYIEFVADRLLLALGNTKVYNAT-NPFDFM-ENISLAGKTNFFEKRVGDYQKAG 376


>gi|328700093|ref|XP_001944536.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Acyrthosiphon pisum]
          Length = 361

 Score = 60.1 bits (144), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  Q     ++ EA  +E  +    +P   VG++
Sbjct: 233 RDEGLHTDFACLLFK-------HLEQKPPQAVITHIICEAVTIEQDFLTNALPVRMVGMS 285

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                 Y++F+A+R  +++G   +++ + NPFP+M ++I  + + NFFE RV +YQ+ +
Sbjct: 286 CEKMAVYIEFVADRLLNELGCPTVYR-SSNPFPFM-DLISQQGKTNFFEKRVGDYQKAS 342


>gi|302843870|ref|XP_002953476.1| hypothetical protein VOLCADRAFT_109884 [Volvox carteri f.
           nagariensis]
 gi|300261235|gb|EFJ45449.1| hypothetical protein VOLCADRAFT_109884 [Volvox carteri f.
           nagariensis]
          Length = 400

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 65/120 (54%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQ-KSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE LH +F   +   +        +K+ ++ + + ++ EA  +E  +  + +P   +G+
Sbjct: 273 RDEGLHCDFACLLYGML--------SKQLEESRIKEIICEAVDIENEFCTDALPVDLIGM 324

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N+    QY++F+A+R    +G    +  T NPF +M ++I L+ + NFFE RV +YQ+  
Sbjct: 325 NSRLMAQYIEFVADRLLVALGCSKAYNVT-NPFDFM-DMISLQGKTNFFEKRVGDYQKSG 382


>gi|154149104|ref|YP_001405803.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           hominis ATCC BAA-381]
 gi|153805113|gb|ABS52120.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           hominis ATCC BAA-381]
          Length = 340

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+  +   K   M  +A  LEI +         +GL 
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFNDKNIAKIYEMFEKAGELEIKWGKYITQNQIMGLT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ + R   IGL   +    +P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DEIIEEYIHYLVDNRLSAIGLNKKYN-ARHPIKWVDDFAKFNDQKSNFFESKVTNYSKGS 334


>gi|157869457|ref|XP_001683280.1| ribonucleoside-diphosphate reductase small chain [Leishmania major
           strain Friedlin]
 gi|68224164|emb|CAJ04657.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania major strain Friedlin]
          Length = 392

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + N H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 265 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFFE +V EYQ+  
Sbjct: 319 AELMAQYIEFVADRLLVSLGEEKHYHSTQ-PFEFM-EMISLQGKTNFFERKVGEYQKAG 375


>gi|15613065|ref|NP_241368.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus
           halodurans C-125]
 gi|14195134|sp|Q9KFH7|RIR2_BACHD RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|10173115|dbj|BAB04221.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus
           halodurans C-125]
          Length = 345

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 2/119 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH+    ++  ++ +E P L T+E +   +T L +A  LE  +    +     G+N
Sbjct: 217 RDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLMKAADLEKDWFRYIIGDKIPGIN 276

Query: 62  APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
               E Y+ FIAN+R  Q+G+E P  +   NP  W+    D+   K +FFE +  +Y +
Sbjct: 277 PEDMETYISFIANKRAVQLGMEKPYPEIKHNPMKWIRAYEDVNSGKSDFFEQKSRQYAK 335


>gi|153952438|ref|YP_001397460.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. doylei 269.97]
 gi|152939884|gb|ABS44625.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. doylei 269.97]
          Length = 340

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN +  E P L+  E   K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVHKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   I L+ L+   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334


>gi|167648664|ref|YP_001686327.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter sp.
           K31]
 gi|167351094|gb|ABZ73829.1| Ribonucleoside-diphosphate reductase [Caulobacter sp. K31]
          Length = 346

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    I + +    E   + T E             ++E A+       G + G
Sbjct: 197 IRDESLHCEGIIKLYHAFNAETKCV-TPEVAADIVECCKSVVIMEDAFIDLAFEAGEIQG 255

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     +QY++FIA+ R  Q+ L  ++   ENP PW+  ++   +  NFFE R TEY + 
Sbjct: 256 MTPHDIKQYIRFIADWRLRQLHLPEVYGIKENPLPWLQSLLSGVEHANFFEARATEYSKA 315

Query: 120 A 120
           A
Sbjct: 316 A 316


>gi|83859670|ref|ZP_00953190.1| ribonucleotide-diphosphate reductase beta subunit [Oceanicaulis
           alexandrii HTCC2633]
 gi|83852029|gb|EAP89883.1| ribonucleotide-diphosphate reductase beta subunit [Oceanicaulis
           alexandrii HTCC2633]
          Length = 348

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    + + +    E   L TK  +            LE  +       G V G
Sbjct: 197 VRDESLHCEGMMKLFHTFAEETGAL-TKGVKDDIADCCKTVVSLEDKFIELAFEAGEVEG 255

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     + Y+++IA+ R  Q+ L  ++   E+P PW++E+++  +  NFFE R TEY +G
Sbjct: 256 MTPEDIKNYIRYIADWRMKQLKLPTIYGVEEHPIPWLTEILNGVEHANFFEARATEYSKG 315

Query: 120 A 120
           A
Sbjct: 316 A 316


>gi|224372455|ref|YP_002606827.1| ribonucleotide-diphosphate reductase subunit beta [Nautilia
           profundicola AmH]
 gi|223589410|gb|ACM93146.1| ribonucleoside-diphosphate reductase, beta subunit [Nautilia
           profundicola AmH]
          Length = 346

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 3/122 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H     ++  +IK E P L+T E  +  + ML+ A  LE  +         +G++
Sbjct: 219 RDEVTHTLLFANIFKEIKKEFPDLFTPEVIKNIKDMLYAAYELERDWGWYITNDEILGMS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
               +++ Q++AN+R   +GL+ LF     +NP  W        ++K NFFE  V  Y +
Sbjct: 279 KELIDRFTQYLANKRAQAMGLDLLFPEVGLKNPISWFDGFSSFNEQKTNFFEGNVVNYSK 338

Query: 119 GA 120
           G+
Sbjct: 339 GS 340


>gi|224007863|ref|XP_002292891.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220971753|gb|EED90087.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 297

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +++  + P       + +   ++  A  +E  +  + +P   +G+N
Sbjct: 172 RDEGLHCDFACLLYSKLVNKLP-------ESRITKIITVAVEIEKEFVSDALPVELIGMN 224

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +     Y++F A+R    +G    +  T NPF WM E+I L+ + NFFE RV EY +  
Sbjct: 225 SKLMCDYIEFCADRLLGALGCSKFYNAT-NPFEWM-EMISLQGKTNFFEKRVGEYAKSG 281


>gi|169613737|ref|XP_001800285.1| hypothetical protein SNOG_10001 [Phaeosphaeria nodorum SN15]
 gi|111061216|gb|EAT82336.1| hypothetical protein SNOG_10001 [Phaeosphaeria nodorum SN15]
          Length = 409

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + + +        T+  +   + ++ EA  +E  +  E +P   +G+N
Sbjct: 267 RDEGMHTDFACLLFSLLN-------TRPSKDAVKAIITEAVEIEQEFLTEALPCALLGMN 319

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G   ++  T NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 320 STLMCQYIEFVADRLLLALGNTKVYNAT-NPFDFM-ENISLAGKTNFFEKRVGDYQKAG 376


>gi|256027986|ref|ZP_05441820.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp.
           D11]
          Length = 348

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EIA+    +    +G+ 
Sbjct: 220 RDELSHVVLFRSIVKEIKNDFPNFFSAE---TVYSMFKTAVEQEIAWTEHIIGNRVLGIT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
           + + E Y +++AN R   +GLEPLF  + +NP+  +    D + E     NFFE  VT Y
Sbjct: 277 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 336

Query: 117 QQGAEL 122
              + +
Sbjct: 337 NMSSSI 342


>gi|289742419|gb|ADD19957.1| ribonucleotide reductase beta subunit [Glossina morsitans
           morsitans]
          Length = 396

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 64/117 (54%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F + +         HL  K  +++   ++ +A  +E  +  E +P   +G+N
Sbjct: 271 RDEGLHCEFAVLMFK-------HLIQKPSKERILEIITDAVKIEKEFLTEALPVDLIGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           + S  +Y++++A+R   ++ +   +   ENPF +M++ I +  + NFFE RV EYQ+
Sbjct: 324 SESMCKYIEYVADRLLLELDVGKYY-LAENPFEFMNK-ISIDGKTNFFEKRVGEYQK 378


>gi|260497963|ref|ZP_05816079.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_33]
 gi|260196471|gb|EEW94002.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_33]
          Length = 344

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EIA+    +    +G+ 
Sbjct: 216 RDELSHVVLFRSIVKEIKNDFPNFFSAE---TVYSMFKTAVEQEIAWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
           + + E Y +++AN R   +GLEPLF  + +NP+  +    D + E     NFFE  VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332

Query: 117 QQGAEL 122
              + +
Sbjct: 333 NMSSSI 338


>gi|219126374|ref|XP_002183434.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405190|gb|EEC45134.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 296

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + ++++ + P     E       ++ +A  +E  +  + +P   +G+N
Sbjct: 172 RDEGLHCDFACLLYSKLQNQLPVARIVE-------IITDAVTIEQEFVQDALPVELIGMN 224

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    +Y++F A+R    +G    +K   NPF WM E+I L+ + NFFE RV EY +  
Sbjct: 225 STLMCRYIEFCADRLLVALGCPKHYKAV-NPFDWM-EMISLQGKTNFFEKRVGEYAKSG 281


>gi|57505748|ref|ZP_00371674.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           upsaliensis RM3195]
 gi|57016021|gb|EAL52809.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           upsaliensis RM3195]
          Length = 340

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+ ++   K  +M   A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFNEQNIDKIYSMFKRAGELEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   I L+ ++   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLIAINLDKIYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334


>gi|20069937|ref|NP_613141.1| ribonucleotide reductase small subunit [Mamestra configurata NPV-A]
 gi|20043331|gb|AAM09166.1| ribonucleotide reductase small subunit [Mamestra configurata NPV-A]
 gi|33331769|gb|AAQ11077.1| putative ribonucleotide reductase small subunit-like protein
           [Mamestra configurata NPV-A]
          Length = 313

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 8/116 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F           N  +  K   +K   M  EA  +E  +  + +P   +G+N
Sbjct: 191 RDEGMHTDFAC------LYYNTRVKEKLSYEKILDMFKEAVDIEKEFFTDALPVSLLGMN 244

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
           A    +Y++F+A+R   Q+G +P +    NPF +M+  I L+ + NFFE RV EY+
Sbjct: 245 ATMMCEYIEFVADRLLMQLG-QPKYYNARNPFSFMNN-ISLEGKTNFFERRVGEYK 298


>gi|289765931|ref|ZP_06525309.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. D11]
 gi|289717486|gb|EFD81498.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. D11]
          Length = 344

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EIA+    +    +G+ 
Sbjct: 216 RDELSHVVLFRSIVKEIKNDFPNFFSAE---TVYSMFKTAVEQEIAWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
           + + E Y +++AN R   +GLEPLF  + +NP+  +    D + E     NFFE  VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332

Query: 117 QQGAEL 122
              + +
Sbjct: 333 NMSSSI 338


>gi|88608725|ref|YP_506404.1| ribonucleotide-diphosphate reductase subunit beta [Neorickettsia
           sennetsu str. Miyayama]
 gi|88600894|gb|ABD46362.1| ribonucleoside-diphosphate reductase, beta subunit [Neorickettsia
           sennetsu str. Miyayama]
          Length = 322

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 9/130 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIEN---PHLWTKEFQQKSRTMLH-EATLLEIAYAHETMPKG 56
           +RDE+LH N    +     +EN         E ++    M+H E   +++A+    +   
Sbjct: 189 VRDETLHSNSITKLFRTFLLENNIDKFKLEAEIREICNAMVHHEDAFIDLAFEMGDVE-- 246

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
             GL A   ++Y+++IAN R  Q+G   +++   NP  W+  V++  +  NFFE + TEY
Sbjct: 247 --GLKASEVKEYIRYIANLRLKQLGFSEIYEQKVNPLLWLEAVLNTVEHTNFFENKATEY 304

Query: 117 QQGA-ELKWD 125
            + A +  WD
Sbjct: 305 SKAATKGTWD 314


>gi|223996990|ref|XP_002288168.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975276|gb|EED93604.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 335

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +++  + P       + +   ++  A  +E  +  + +P   +G+N
Sbjct: 210 RDEGLHCDFACLIYSKLVNQLP-------ESRIEEIITNAVEIEKEFVSDALPVELIGMN 262

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F A+R    +G +  +    NPF WM E+I L+ + NFFE RV EY +  
Sbjct: 263 SKLMCQYIEFCADRLLGALGCKKHYMAV-NPFEWM-EMISLQGKTNFFEKRVGEYAKSG 319


>gi|168049349|ref|XP_001777126.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671569|gb|EDQ58119.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 325

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +         K  + +   ++ EA  +E  +  E +    VG+N
Sbjct: 197 RDEGLHCDFACLLYTLLN-------NKLSEDRVHEIVCEAVDIEREFVCEALSCDLVGMN 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                +Y+ F+A+R    +G    +    NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 250 KIMMSEYIDFVADRLLVSLGYNKRYN-ARNPFDWM-ELISLQGKTNFFEKRVGEYQKAS 306


>gi|257792030|ref|YP_003182636.1| ribonucleotide-diphosphate reductase subunit beta [Eggerthella
           lenta DSM 2243]
 gi|317488666|ref|ZP_07947206.1| ribonucleotide reductase [Eggerthella sp. 1_3_56FAA]
 gi|257475927|gb|ACV56247.1| Ribonucleoside-diphosphate reductase [Eggerthella lenta DSM 2243]
 gi|316912225|gb|EFV33794.1| ribonucleotide reductase [Eggerthella sp. 1_3_56FAA]
          Length = 347

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ ++K E P L+  E  ++ R M+ E    EI + H  +     GLN
Sbjct: 219 RDENTHLWLFRNILLELKEEEPELFAPELVEEYRAMIKEGCEQEIRWGHYAIGDDVAGLN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y+Q++ N RC Q+G EPL++  E       W+S+  +    K +FFE R T Y 
Sbjct: 279 KQMVTDYIQYLGNLRCAQLGFEPLYEGHEREPESMSWVSQFSNANMIKTDFFEARSTAYA 338

Query: 118 QGAEL 122
           + + L
Sbjct: 339 KSSAL 343


>gi|295401051|ref|ZP_06811025.1| Ribonucleoside-diphosphate reductase [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312112173|ref|YP_003990489.1| ribonucleotide reductase [Geobacillus sp. Y4.1MC1]
 gi|294976844|gb|EFG52448.1| Ribonucleoside-diphosphate reductase [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311217274|gb|ADP75878.1| ribonucleotide reductase [Geobacillus sp. Y4.1MC1]
          Length = 346

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H++    +  ++  E P   T E  +  +    +A  LEI +A+  +     G++
Sbjct: 218 RDEHIHVDLFAKIFKEVLSEYPEYNTPELAEFVQATFTKAAELEIEWANYIIGNDIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEKNFFETRVTEYQQ 118
                 Y++F AN R HQ+G E P   Y  NP  W+   E +DL K  +FFE +  +Y +
Sbjct: 278 MHDLSAYIKFYANVRAHQLGFERPFAGYRTNPLRWIKAYEEVDLGK-SDFFEQKSRQYTK 336


>gi|40556174|ref|NP_955259.1| CNPV236 ribonucleotide reductase small subunit [Canarypox virus]
 gi|40233999|gb|AAR83582.1| CNPV236 ribonucleotide reductase small subunit [Canarypox virus]
          Length = 323

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 8/117 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  Q +   ++  A  +E  +  E +    +G+N
Sbjct: 197 RDEGLHCDFACLLFTN------YLSHKPSQDRVYEIIDSAVSVETEFLTEALSIDLIGMN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           + S  +Y++F+++R    +G    +   ENPF +M E I L+ + NFFE RV+ YQ+
Sbjct: 251 SKSMIEYIKFVSDRLLVSLGFSKKYN-VENPFSFM-ENISLEGKANFFEKRVSNYQK 305


>gi|56555145|gb|AAV98100.1| RR2 protein [Shrimp white spot syndrome virus]
          Length = 328

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 8/111 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   ++ +  ++ P       +++   ++ EA  +E  +   ++P   VG+N
Sbjct: 226 RDEGLHRDFACMLLKKGFVDTPS------RERILEIVTEAVRIEQEFLTVSLPVKLVGMN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 112
                QY++F+A++   ++GLE  +  T NPFP+M   I L+ + NFFE R
Sbjct: 280 CKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMDN-ISLENKTNFFEKR 328


>gi|291239432|ref|XP_002739627.1| PREDICTED: hCG23833-like [Saccoglossus kowalevskii]
          Length = 309

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F   +  +IK   P         K R ++ E   +E  +    + K  +G+N
Sbjct: 190 RDEGLHCTFACTMYGKIKPRLP-------DTKVRKIVLEGCEVEKLFVKHALRKPLLGMN 242

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           +   E Y+ F+ +     +G E  F    NPFP+M   I ++ + NFFE RVTEY +
Sbjct: 243 SHLMETYVNFVTDNLLTDLGYEKEFG-VNNPFPFMDN-ISMQGKTNFFERRVTEYTR 297


>gi|15617531|ref|NP_258331.1| RR2B [Spodoptera litura NPV]
 gi|15553267|gb|AAL01745.1|AF325155_57 ribonucleotide reductase small subunit homolog [Spodoptera litura
           NPV]
          Length = 333

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 64/117 (54%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +   H+  K  + +   ++ EA  +E  +  E +P   +G+N
Sbjct: 206 RDEGLHTDFAC-------LMYSHIVNKPTRDRILDIITEAVAIENEFVTEALPVAMLGMN 258

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                +Y++F+A+R   ++  E  +  T+NPF +M+ +I L+ + NFFE +V+EYQ+
Sbjct: 259 NDLMSKYIEFVADRLLLELIGERHYN-TKNPFDFMN-LISLEGKTNFFEKKVSEYQK 313


>gi|269865627|ref|XP_002651990.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063361|gb|EED42066.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 290

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H +          ++ EA  +E  +  E++P   +G+N
Sbjct: 168 RDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMN 218

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A+R    +G + ++  + NPF +M E I L+ + NFFE R T YQ+G
Sbjct: 219 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERRETNYQKG 274


>gi|119478853|ref|XP_001259462.1| ribonucleotide reductase small subunit RnrA, putative [Neosartorya
           fischeri NRRL 181]
 gi|119407616|gb|EAW17565.1| ribonucleotide reductase small subunit RnrA, putative [Neosartorya
           fischeri NRRL 181]
          Length = 405

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  ++    ++ EA  +E  +  E +P   +G+N
Sbjct: 268 RDEGLHTDFACLLFS-------HLNHRPDKKVVEDIIVEAVAIEQEFLTEALPVALLGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  + NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYYN-SSNPFDFM-ESISLAGKTNFFEKRVGDYQKAG 377


>gi|315637824|ref|ZP_07893014.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           upsaliensis JV21]
 gi|315482065|gb|EFU72679.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           upsaliensis JV21]
          Length = 340

 Score = 59.3 bits (142), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+ ++   K  +M   A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFNEQNIDKIYSMFKRAGELEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   I L+ ++   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLIAINLDRIYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334


>gi|268678691|ref|YP_003303122.1| ribonucleoside-diphosphate reductase [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268616722|gb|ACZ11087.1| Ribonucleoside-diphosphate reductase [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 340

 Score = 59.3 bits (142), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN  K E P L+T   + K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINTTKKERPDLFTDALKAKVYEMFQKAGDLEIEWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E Y+ ++ + R   +G + L+    +P  W+ +      +K NFFE  V+ Y +G+
Sbjct: 276 DDIIETYIHYLVDDRLTAVGFDKLYN-ASHPIKWVDDFSKFNDQKTNFFEGNVSNYSKGS 334


>gi|51869996|ref|YP_073549.1| Ribonucleotide reductase [Lymphocystis disease virus - isolate
           China]
 gi|51858204|gb|AAU10888.1| Ribonucleotide reductase [Lymphocystis disease virus - isolate
           China]
          Length = 374

 Score = 59.3 bits (142), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET-MPKGFVG 59
           +RDE++H+     +   I  E P + TK+F +   T+  E   LE A+     +      
Sbjct: 250 IRDENVHVEGLCKLFKTIVSEYPFILTKDFYKAVETLQQEVLKLETAFVDLVFIEDKLKN 309

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L       Y+++I  RR  Q+GL       +NP  W+S +I  +   NFFE RVTEY  G
Sbjct: 310 LKRVDVINYVKYILQRRTVQLGLSNKTD-LQNPILWVSWLISGRDVTNFFENRVTEYDVG 368

Query: 120 A 120
            
Sbjct: 369 G 369


>gi|42525851|ref|NP_970949.1| ribonucleotide-diphosphate reductase subunit beta [Treponema
           denticola ATCC 35405]
 gi|41815901|gb|AAS10830.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           denticola ATCC 35405]
          Length = 351

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L+T +  +  R M+ E    EIA+    +     GLN
Sbjct: 223 RDENTHLWLFRSMIQELQKEEPQLFTPQNVELFRAMIKEGCEQEIAWGDYVIGNDIPGLN 282

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
           +     Y+Q++ N RC  +G  P++  + E P    W S+  +    K +FFE + T Y 
Sbjct: 283 SQMITDYIQYLGNLRCENLGFAPIYDGHREEPQSMSWASQYSNANLIKTDFFEAKSTAYA 342

Query: 118 QGAEL 122
           + + +
Sbjct: 343 KSSAM 347


>gi|253582918|ref|ZP_04860136.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           varium ATCC 27725]
 gi|251835124|gb|EES63667.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           varium ATCC 27725]
          Length = 348

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 9/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +I+ ENP  +  E   +   M  +A   EI + +  +    +G+ 
Sbjct: 220 RDELSHVVIFQHLLKEIRNENPDFFNDE---EIYDMFRKAVEQEINWTNHIIGNQILGIT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
             + EQY +++AN R   IGL+P++  + +NP+  +++  D + E     NFFE  VT Y
Sbjct: 277 EETTEQYTKWLANERLRSIGLKPIYDGFNKNPYKHLTKFADTEGEGNVKANFFEGTVTSY 336

Query: 117 QQGAELK-WD 125
              + +  WD
Sbjct: 337 NMSSSIDGWD 346


>gi|297736972|emb|CBI26173.3| unnamed protein product [Vitis vinifera]
          Length = 312

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 9/105 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P  W     QK   ++HEA  +E  +  E +P   +G+N
Sbjct: 171 RDEGLHCDFACLLYSLLQKQLP--W-----QKVHHIVHEAVEIETQFVCEALPCALIGMN 223

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK 106
           A    QY++F+A+R    +G E  +   ENPF WM E I L+  +
Sbjct: 224 ATLMSQYIKFVADRLLVALGYERKYN-VENPFDWM-EFISLQCSR 266


>gi|290343623|ref|YP_003494990.1| hypothetical protein OTV1_151 [Ostreococcus tauri virus 1]
 gi|260161038|emb|CAY39739.1| hypothetical protein OTV1_151 [Ostreococcus tauri virus 1]
          Length = 389

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F +++   ++   P + T         ++ EA  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHQEFAVELFKTLR-NRPGVDT------IHAIVREAVDIEKGFILDALPCNLIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           +    +Y++++++R   QIG+ P    ++NPF +M E I L  + NFFE RV +Y +
Sbjct: 321 SEKMSEYIEYVSDRLLKQIGV-PTIWNSKNPFDFM-ENISLDGKTNFFEKRVGDYGK 375


>gi|257458932|ref|ZP_05624052.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           gracilis RM3268]
 gi|257443636|gb|EEV18759.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           gracilis RM3268]
          Length = 340

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+ K    K   M   A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERADLFNKRNVDKIYEMFETAGNLEIDWGKYITDNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   IGLE  +   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLLAIGLEKRYD-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334


>gi|163955147|ref|YP_001648251.1| hypothetical protein OsV5_174r [Ostreococcus virus OsV5]
 gi|163638596|gb|ABY27955.1| hypothetical protein OsV5_174r [Ostreococcus virus OsV5]
          Length = 322

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F +++   ++   P + T         ++ EA  +E  +  + +P   +G+N
Sbjct: 201 RDEGLHQEFAVELFKTLR-NRPGVDT------IHAIVREAVEIEKGFILDALPCNLIGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           +    +Y++++++R   QIG+ P    ++NPF +M E I L  + NFFE RV +Y +
Sbjct: 254 SEKMSEYIEYVSDRLLKQIGV-PTIWNSKNPFDFM-ENISLDGKTNFFEKRVGDYGK 308


>gi|327298815|ref|XP_003234101.1| ribonucleotide reductase small subunit RnrA [Trichophyton rubrum
           CBS 118892]
 gi|326464279|gb|EGD89732.1| ribonucleotide reductase small subunit RnrA [Trichophyton rubrum
           CBS 118892]
          Length = 408

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +        ++ EA  +E  +  + +P   +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLNYRPDPSAVEAIITEAVTIEQEFLTDALPCALLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G +  +  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 325 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 381


>gi|155122339|gb|ABT14207.1| hypothetical protein MT325_M653L [Paramecium bursaria chlorella
           virus MT325]
          Length = 326

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  FG  + +  K+EN     K    + + ++ EA   E  +  E +P   +G+N
Sbjct: 202 RDEGLHQQFGELLYS--KLEN-----KLSLAQVKAIVEEAVANEKEFICEAIPCRMIGMN 254

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           +    QY++F+A+R    +G    +  T NPF +M E+I L+ + NFFE RV+EYQ+
Sbjct: 255 SELMGQYLEFVADRIFVALGHPKQYNAT-NPFDFM-ELISLEGKSNFFERRVSEYQR 309


>gi|155370749|ref|YP_001426283.1| hypothetical protein FR483_N651L [Paramecium bursaria Chlorella
           virus FR483]
 gi|155124069|gb|ABT15936.1| hypothetical protein FR483_N651L [Paramecium bursaria Chlorella
           virus FR483]
          Length = 348

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  FG  + +  K+EN     K    + + ++ EA   E  +  E +P   +G+N
Sbjct: 224 RDEGLHQQFGELLYS--KLEN-----KLSLAQVKAIVEEAVANEKEFICEAIPCRMIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           +    QY++F+A+R    +G    +  T NPF +M E+I L+ + NFFE RV+EYQ+
Sbjct: 277 SELMGQYLEFVADRIFVALGHPKQYNAT-NPFDFM-ELISLEGKSNFFERRVSEYQR 331


>gi|302497417|ref|XP_003010709.1| hypothetical protein ARB_03411 [Arthroderma benhamiae CBS 112371]
 gi|291174252|gb|EFE30069.1| hypothetical protein ARB_03411 [Arthroderma benhamiae CBS 112371]
          Length = 408

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +        ++ EA  +E  +  + +P   +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLNYRPDPSAVEAIITEAVTIEQEFLTDALPCALLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G +  +  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 325 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 381


>gi|225386408|ref|ZP_03756172.1| hypothetical protein CLOSTASPAR_00155 [Clostridium asparagiforme
           DSM 15981]
 gi|225047489|gb|EEG57735.1| hypothetical protein CLOSTASPAR_00155 [Clostridium asparagiforme
           DSM 15981]
          Length = 347

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L++ E  +  + M+ E    EIA+ H  +     GL 
Sbjct: 219 RDENTHLWLLRNMILELKKEEPQLFSPETVEMLKAMVEEGVEQEIAWGHYVIGDRISGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                +Y++++ N R   +G EPL++ Y E P    W+ +  +    K +FFE + T Y 
Sbjct: 279 REMVTEYIRYLGNLRWTSLGFEPLYEGYEEEPESMKWVGQYSNANMVKTDFFEAKSTAYA 338

Query: 118 QGAEL 122
           +   L
Sbjct: 339 KSTAL 343


>gi|326472581|gb|EGD96590.1| ribonucleotide reductase small subunit RnrA [Trichophyton tonsurans
           CBS 112818]
          Length = 408

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +        ++ EA  +E  +  + +P   +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLNYRPDPNAVEAIITEAVTIEQEFLTDALPCALLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G +  +  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 325 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 381


>gi|302381236|ref|YP_003817059.1| ribonucleoside-diphosphate reductase [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302191864|gb|ADK99435.1| Ribonucleoside-diphosphate reductase [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 348

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH +  I + +    E   + TK               LE  +       G + G
Sbjct: 200 VRDESLHCDGIIKLYHAFNKETGVV-TKAVADDIVQCCETVVGLEDKFIDLAFEAGEING 258

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     +QY++FIA+ R  Q+ L  L+   ENP PW+  ++   +  NFFE R TEY + 
Sbjct: 259 MTPEDIKQYIRFIADWRLRQLKLPELYGVKENPLPWLQSLLSGVEHANFFEARATEYSKA 318

Query: 120 A 120
           A
Sbjct: 319 A 319


>gi|282598964|ref|YP_003358881.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Deftia phage phiW-14]
 gi|257219034|gb|ACV50049.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Deftia phage phiW-14]
          Length = 346

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 7/131 (5%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE +H+     +  ++  E+P L T E +++   +       E  +      K  + +
Sbjct: 205 LRDEGIHVEGSSLLYRKVMGEHPWLMTDEHKKQVYDLARAVVAAEDLFLDLAFKKYQLTM 264

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI---DLKKEKNFFETRVTEYQ 117
                + Y++++ NRR  Q+G + +F+    P PW+ E++     K++ NFFETRV  YQ
Sbjct: 265 TKDESKAYVRYMMNRRLLQLGHKAIFEVQGIPCPWIEEILGGAGGKRDSNFFETRVDNYQ 324

Query: 118 -QGA---ELKW 124
             GA   EL W
Sbjct: 325 ASGALVGELDW 335


>gi|168031987|ref|XP_001768501.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680214|gb|EDQ66652.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 331

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +    L  K  +++   ++ EA  +E  +  E +    VG+N
Sbjct: 201 RDEGLHCDFAC-------LLYTLLINKLSEERVYEIVCEAVEIEREFVCEALSCDLVGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                +Y+ F+A+R    +G     KY   NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 254 KILMSEYIDFVADRLLVSLGYRK--KYNALNPFDWM-ELISLQGKTNFFEKRVGEYQKAS 310


>gi|237738278|ref|ZP_04568759.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           mortiferum ATCC 9817]
 gi|229420158|gb|EEO35205.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           mortiferum ATCC 9817]
          Length = 348

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 9/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I +++ ENP+ + +    +   M  +A   EI++ +  +    +G+ 
Sbjct: 220 RDELSHVVIFQQMIKEVQNENPNFFDENIIYE---MFEKAVEQEISWTNHIIGGNILGIT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
             + E Y +++AN R   IGL+PL++ Y +NP+  +    D + E     NFFE  VT Y
Sbjct: 277 EKTTESYTKWLANERLKSIGLQPLYEGYEKNPYKHLERFADTEGEGNVKANFFEGTVTSY 336

Query: 117 QQGAELK-WD 125
              + ++ WD
Sbjct: 337 NMSSSVEGWD 346


>gi|119174781|ref|XP_001239725.1| hypothetical protein CIMG_09346 [Coccidioides immitis RS]
          Length = 408

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   +  + ++ EA  +E  +  + +P   +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLRHRPGPEAVQAIITEAVEIEKEFLTDALPCALLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 325 SKLMCQYIEFVADRLLVALGNKKFYNAT-NPFDFMDN-ISLSGKTNFFEKRVGDYQKAG 381


>gi|315041979|ref|XP_003170366.1| ribonucleoside-diphosphate reductase small subunit [Arthroderma
           gypseum CBS 118893]
 gi|311345400|gb|EFR04603.1| ribonucleoside-diphosphate reductase small subunit [Arthroderma
           gypseum CBS 118893]
          Length = 408

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +        ++ EA  +E  +  + +P   +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLNHRPEPSAVEAIITEAVTIEQEFLTDALPCALLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G +  +  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 325 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 381


>gi|302665732|ref|XP_003024474.1| hypothetical protein TRV_01368 [Trichophyton verrucosum HKI 0517]
 gi|291188529|gb|EFE43863.1| hypothetical protein TRV_01368 [Trichophyton verrucosum HKI 0517]
          Length = 529

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +        ++ EA  +E  +  + +P   +G+N
Sbjct: 393 RDEGLHTDFACLLFS-------HLNYRPDPSAVEAIITEAVTIEQEFLTDALPCALLGMN 445

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G +  +  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 446 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 502


>gi|303314521|ref|XP_003067269.1| ribonucleoside-diphosphate reductase small chain, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|240106937|gb|EER25124.1| ribonucleoside-diphosphate reductase small chain, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|320037571|gb|EFW19508.1| ribonucleoside-diphosphate reductase small subunit [Coccidioides
           posadasii str. Silveira]
          Length = 408

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   +  + ++ EA  +E  +  + +P   +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLRHRPGPEAVQAIITEAVEIEKEFLTDALPCALLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 325 SKLMCQYIEFVADRLLVALGNKKFYNAT-NPFDFMDN-ISLSGKTNFFEKRVGDYQKAG 381


>gi|70997335|ref|XP_753417.1| ribonucleotide reductase small subunit RnrA [Aspergillus fumigatus
           Af293]
 gi|66851053|gb|EAL91379.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           fumigatus Af293]
 gi|159126856|gb|EDP51972.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           fumigatus A1163]
          Length = 405

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  ++    ++ EA  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHTDFACLLFS-------HLNHRPDKKVIEDIIVEAVAIEQEFLTDALPVALLGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  F  + NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYFN-SPNPFDFM-ESISLAGKTNFFEKRVGDYQKAG 377


>gi|167748341|ref|ZP_02420468.1| hypothetical protein ANACAC_03085 [Anaerostipes caccae DSM 14662]
 gi|167652333|gb|EDR96462.1| hypothetical protein ANACAC_03085 [Anaerostipes caccae DSM 14662]
          Length = 358

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ ++K E P L+  +     R M+ +    EI + H  +     GL 
Sbjct: 230 RDENTHLWLFKNILLELKKEEPSLFHPDCINDYRRMIKKGCEQEIRWGHYVIGDEIQGLK 289

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
               E+Y++++ N RC  +G EP++  +E       W+S+  +    K +FFE + T Y 
Sbjct: 290 KEMVEEYIRYLGNLRCQNLGFEPIYPGSETEPESMSWVSQFSNANMIKTDFFEAKSTAYA 349

Query: 118 QGAEL 122
           + + L
Sbjct: 350 KSSAL 354


>gi|317472120|ref|ZP_07931452.1| ribonucleotide reductase [Anaerostipes sp. 3_2_56FAA]
 gi|316900524|gb|EFV22506.1| ribonucleotide reductase [Anaerostipes sp. 3_2_56FAA]
          Length = 347

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ ++K E P L+  +     R M+ +    EI + H  +     GL 
Sbjct: 219 RDENTHLWLFKNILLELKKEEPSLFHPDCINDYRRMIKKGCEQEIRWGHYVIGDEIQGLK 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
               E+Y++++ N RC  +G EP++  +E       W+S+  +    K +FFE + T Y 
Sbjct: 279 KEMVEEYIRYLGNLRCQNLGFEPIYPGSETEPESMSWVSQFSNANMIKTDFFEAKSTAYA 338

Query: 118 QGAEL 122
           + + L
Sbjct: 339 KSSAL 343


>gi|332031690|gb|EGI71130.1| Ribonucleoside-diphosphate reductase subunit M2 [Acromyrmex
           echinatior]
          Length = 210

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 67/124 (54%), Gaps = 9/124 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   I ++ P        ++ ++++ +A  +E  +  + +P   +G+N
Sbjct: 81  RDEGLHCDFACLMFKHI-VQKPSF------ERVKSIVMDAVEIEKEFLTQALPVELIGMN 133

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                 Y++F+A+R    +G E ++  +ENPF +M + I +  + NFFE +V EY++   
Sbjct: 134 RTFMCNYIEFVADRLFVALGFEKVYN-SENPFSFM-DFISMMGKTNFFEKKVGEYKKFGV 191

Query: 122 LKWD 125
           ++ D
Sbjct: 192 MEED 195


>gi|57168357|ref|ZP_00367491.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           coli RM2228]
 gi|305432773|ref|ZP_07401932.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           coli JV20]
 gi|57020165|gb|EAL56839.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           coli RM2228]
 gi|304444170|gb|EFM36824.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           coli JV20]
          Length = 340

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+ +    K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFNENNINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   I L+ ++   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLVAINLDKIYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334


>gi|330941351|gb|EGH44203.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 317

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/26 (92%), Positives = 26/26 (100%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLW 26
           +RDES+HLNFGIDVINQIKIENPHLW
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLW 316


>gi|121713826|ref|XP_001274524.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           clavatus NRRL 1]
 gi|119402677|gb|EAW13098.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           clavatus NRRL 1]
          Length = 405

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  ++    ++ EA  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHTDFACLLFS-------HLNNRPDKKVVEDIIVEAVAIEQEFLTDALPVALLGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  + NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYYN-SPNPFDFM-ESISLAGKTNFFEKRVGDYQKAG 377


>gi|212533263|ref|XP_002146788.1| ribonucleotide reductase small subunit RnrA, putative [Penicillium
           marneffei ATCC 18224]
 gi|210072152|gb|EEA26241.1| ribonucleotide reductase small subunit RnrA, putative [Penicillium
           marneffei ATCC 18224]
          Length = 406

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL T+   +    ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHTDFACMLFS-------HLNTRPNPKVIEDIIVDAVAIEQEFLTDALPCALLGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  T NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYYNAT-NPFDFM-ENISLAGKTNFFEKRVGDYQKAG 377


>gi|169779219|ref|XP_001824074.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
           oryzae RIB40]
 gi|238499845|ref|XP_002381157.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           flavus NRRL3357]
 gi|83772813|dbj|BAE62941.1| unnamed protein product [Aspergillus oryzae]
 gi|220692910|gb|EED49256.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           flavus NRRL3357]
          Length = 405

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   Q    ++ EA  +E  +  + +P   +G+N
Sbjct: 269 RDEGLHTDFACLLFS-------HLNNRPDPQIVEDVIVEAVSIEKEFLTDALPCALLGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G    F  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 322 SNLMCQYIEFVADRLLVALGNNKYFNAT-NPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 378


>gi|296809816|ref|XP_002845246.1| ribonucleotide reductase [Arthroderma otae CBS 113480]
 gi|238842634|gb|EEQ32296.1| ribonucleotide reductase [Arthroderma otae CBS 113480]
          Length = 405

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +        ++ EA  +E  +  + +P   +G+N
Sbjct: 269 RDEGLHTDFACLLFS-------HLNYRPDPTAVEAIITEAVSIEQEFLTDALPCALLGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G +  +  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 322 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 378


>gi|294659365|ref|XP_461732.2| DEHA2G04268p [Debaryomyces hansenii CBS767]
 gi|199433907|emb|CAG90185.2| DEHA2G04268p [Debaryomyces hansenii]
          Length = 426

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +        ++ EA  +E  +  + +P   +G+N
Sbjct: 297 RDEGLHTDFACLLFS-------HLQNRPDAVIVERIITEAVTIEKEFFVDALPISLLGMN 349

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G + ++  T NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 350 CNLMCQYVEFVADRLLVALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 406


>gi|254303614|ref|ZP_04970972.1| ribonucleoside-diphosphate reductase [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
 gi|148323806|gb|EDK89056.1| ribonucleoside-diphosphate reductase [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
          Length = 344

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EIA+    +    +G+ 
Sbjct: 216 RDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEIAWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
           + + E Y +++AN R   +GLEPLF  + +NP+  +    D + E     NFFE  VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332

Query: 117 QQGAEL 122
              + +
Sbjct: 333 NMSSSI 338


>gi|225712968|gb|ACO12330.1| Ribonucleoside-diphosphate reductase small chain [Lepeophtheirus
           salmonis]
          Length = 335

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H +F         +   HL  K   +    ++ E   +E  +  +++P G +G+N
Sbjct: 209 RDEGSHTDFAC-------LLYSHLENKLDPKYVLQIIKEGVEIEKEFVADSLPVGLIGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           A   + Y++F+A+     + +E  + +T+NPF +M   I +  + NFF+ RV+EYQ+
Sbjct: 262 AKMMKNYIEFVADNLLENLNIEKYY-HTKNPFNFMDN-ISMTGKTNFFDKRVSEYQR 316


>gi|158430770|pdb|2RCC|A Chain A, Crystal Structure Of Putative Class I Ribonucleotide
           Reductase (Np_241368.1) From Bacillus Halodurans At 1.90
           A Resolution
 gi|158430771|pdb|2RCC|B Chain B, Crystal Structure Of Putative Class I Ribonucleotide
           Reductase (Np_241368.1) From Bacillus Halodurans At 1.90
           A Resolution
 gi|158430772|pdb|2RCC|C Chain C, Crystal Structure Of Putative Class I Ribonucleotide
           Reductase (Np_241368.1) From Bacillus Halodurans At 1.90
           A Resolution
          Length = 346

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 2/119 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH+    ++  ++ +E P L T+E +   +T L +A  LE  +    +     G+N
Sbjct: 218 RDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLXKAADLEKDWFRYIIGDKIPGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
               E Y+ FIAN+R  Q+G E P  +   NP  W+    D+   K +FFE +  +Y +
Sbjct: 278 PEDXETYISFIANKRAVQLGXEKPYPEIKHNPXKWIRAYEDVNSGKSDFFEQKSRQYAK 336


>gi|18640273|ref|NP_570429.1| CMLV039 [Camelpox virus]
 gi|18482949|gb|AAL73746.1|AF438165_36 ribonucleotide reductase small subunit [Camelpox virus M-96]
 gi|19717972|gb|AAG37497.1| CMP39L [Camelpox virus CMS]
          Length = 319

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++   +++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVISIITDAVSIEQEFLTVALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++    NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVI-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|269864962|ref|XP_002651756.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|269866721|ref|XP_002652369.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220062645|gb|EED41686.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063933|gb|EED42300.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 135

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H +          ++ EA  +E  +  E++P   +G+N
Sbjct: 13  RDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMN 63

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A+R    +G + ++  + NPF +M E I L+ + NFFE R   YQ+G
Sbjct: 64  CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 119


>gi|306819883|ref|ZP_07453537.1| ribonucleotide-diphosphate reductase beta subunit [Eubacterium
           yurii subsp. margaretiae ATCC 43715]
 gi|304552130|gb|EFM40067.1| ribonucleotide-diphosphate reductase beta subunit [Eubacterium
           yurii subsp. margaretiae ATCC 43715]
          Length = 347

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     ++ ++K E  H++T+E     R M+ +    EI +A   +     GL+
Sbjct: 219 RDENTHLWLFRSILLELKKEEAHIFTQENINLFRNMIKQGVEEEIRWAKYAIGDNIQGLS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y++++ N RC  +G + +++ Y + P    W+SE  D    K +FFE +V+ Y 
Sbjct: 279 MSMIEDYLKYLGNLRCKGLGFDNIYEGYEKEPESMSWVSEYSDPNAIKTDFFEAKVSAYA 338

Query: 118 QGAELKWD 125
           +   ++ D
Sbjct: 339 KSTVIEDD 346


>gi|325294459|ref|YP_004280973.1| ribonucleotide reductase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325064907|gb|ADY72914.1| ribonucleotide reductase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 352

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 5/100 (5%)

Query: 31  QQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90
           + K   M   A   E  ++ + +    +G+N  S E+Y  ++AN+R   +GL+P+F  T 
Sbjct: 251 KDKIYEMFKVAVNQEQRFSKKVIGNKILGMNEKSIEEYTYYVANKRLKALGLDPIFPDTP 310

Query: 91  NPFPWMSEVIDLKKE----KNFFETRVTEYQQGAELK-WD 125
           NP+  +  + D   E     NFFE  VT Y Q + ++ WD
Sbjct: 311 NPYEHLERIADTGGEGNVKANFFEATVTSYNQASAVEGWD 350


>gi|241951880|ref|XP_002418662.1| ribonucleoside diphosphate reductase, putative [Candida
           dubliniensis CD36]
 gi|223642001|emb|CAX43965.1| ribonucleoside diphosphate reductase, putative [Candida
           dubliniensis CD36]
          Length = 394

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE +H ++   + + +K + +P +  K        ++ EA  +E  Y  + +P   +G+
Sbjct: 266 RDEGIHTDYACLLFSYLKNKPSPEIIEK--------IITEAVTIEKKYFSDALPVSLLGM 317

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N     QY++F+A+R     G +  +  T NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 318 NCDLMCQYVEFVADRLLVAFGNKKYYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 375


>gi|320580024|gb|EFW94247.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
           complex [Pichia angusta DL-1]
          Length = 408

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL           ++ EA  +E  Y  + +P   +G+N
Sbjct: 277 RDEGLHTDFACLLFS-------HLNNTPNNDIVLKIITEAVDIEKRYFTDALPVNLLGMN 329

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G +  +  T NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 330 CSLMCQYVEFVADRLLLSLGCKKHYNAT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 386


>gi|255658865|ref|ZP_05404274.1| ribonucleoside-diphosphate reductase, beta subunit [Mitsuokella
           multacida DSM 20544]
 gi|260849270|gb|EEX69277.1| ribonucleoside-diphosphate reductase, beta subunit [Mitsuokella
           multacida DSM 20544]
          Length = 347

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++  ++ E P L+T E ++  R M+ E    EIA+    +     GLN
Sbjct: 219 RDENTHLWLFRNILRDLRAEEPDLFTPEREEMMREMIREGVRQEIAWGKYAIGNEVEGLN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y+ ++ N R   IGL  L++ + E P    W+S+  +    K +F E R T Y 
Sbjct: 279 EKMIEDYVHYLGNARAESIGLGTLYEGFEEEPSSMRWVSQYANPNFIKTDFIEGRSTAYA 338

Query: 118 QGAEL 122
           +   L
Sbjct: 339 KSTAL 343


>gi|70921511|ref|XP_734071.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56506464|emb|CAH78308.1| hypothetical protein PC000956.02.0 [Plasmodium chabaudi chabaudi]
          Length = 87

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 45/69 (65%), Gaps = 2/69 (2%)

Query: 52  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 111
           ++P   +G+N+    QY++F+A+R    +G   +F +++NPF WM ++I L+ + NFFE 
Sbjct: 5   SLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKVF-HSKNPFSWM-DLISLQGKTNFFEK 62

Query: 112 RVTEYQQGA 120
           RV +YQ+  
Sbjct: 63  RVADYQKSG 71


>gi|288800286|ref|ZP_06405744.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
           oral taxon 299 str. F0039]
 gi|288332499|gb|EFC70979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
           oral taxon 299 str. F0039]
          Length = 347

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T +       M+ E    EIA+    +     GLN
Sbjct: 219 RDENTHLWLFRNIIQELKKEEPDLFTPDKVAVYEAMMREGVEQEIAWGQYVIGNDIQGLN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENP---FPWMSEVIDLKKEK-NFFETRVTEYQ 117
           A   + Y++++ N R H +G + L++          W+S+  +    K +FFE + T Y 
Sbjct: 279 AQMVDDYIRYLGNLRWHSLGFDYLYEDNRTEPENMRWVSQYSNANMVKTDFFEAKSTAYA 338

Query: 118 QGAELKWD 125
           +   L+ D
Sbjct: 339 KSTALEDD 346


>gi|269866693|ref|XP_002652360.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220062665|gb|EED41696.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 211

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H +          ++ EA  +E  +  E++P   +G+N
Sbjct: 89  RDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMN 139

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A+R    +G + ++  + NPF +M E I L+ + NFFE R   YQ+G
Sbjct: 140 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 195


>gi|74025552|ref|XP_829342.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|70834728|gb|EAN80230.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
          Length = 337

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 65/119 (54%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  +      ++  K  + +   ++  A L+E  +  + +P   +G+N
Sbjct: 210 RDEGLHTDFACLLYEK------YIVNKLPRDRVLEIICNAVLIEREFICDALPVRLIGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  ++NPF +M ++I L+ + NFFE +V EYQ+  
Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFM-DMISLQGKTNFFEKKVGEYQKAG 320


>gi|71648907|ref|XP_813233.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma cruzi
           strain CL Brener]
 gi|70878098|gb|EAN91382.1| ribonucleoside-diphosphate reductase small chain, putative
           [Trypanosoma cruzi]
          Length = 337

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F       +  EN ++  K  +++ R ++  A  +E  +  + +P   +G+N
Sbjct: 210 RDEGLHTDFAC-----LLYEN-YIVNKLPKERIREIICSAVDIEREFICDAIPVRLLGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A     Y++F+A+R    +G E  +  ++NPF +M E+I L+ + NFFE +V EYQ+  
Sbjct: 264 ADLMSTYIEFVADRLLVALGNERHYN-SKNPFDFM-EMISLQGKTNFFEKKVGEYQKAG 320


>gi|269864946|ref|XP_002651751.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|269865852|ref|XP_002652068.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|269866233|ref|XP_002652201.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220062966|gb|EED41855.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063214|gb|EED41988.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063944|gb|EED42305.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 226

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H +          ++ EA  +E  +  E++P   +G+N
Sbjct: 104 RDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMN 154

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A+R    +G + ++  + NPF +M E I L+ + NFFE R   YQ+G
Sbjct: 155 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 210


>gi|269864629|ref|XP_002651641.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220064151|gb|EED42415.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 277

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H +          ++ EA  +E  +  E++P   +G+N
Sbjct: 155 RDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMN 205

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A+R    +G + ++  + NPF +M E I L+ + NFFE R   YQ+G
Sbjct: 206 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 261


>gi|167957419|ref|ZP_02544493.1| ribonucleotide-diphosphate reductase subunit beta [candidate
           division TM7 single-cell isolate TM7c]
          Length = 277

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 40/66 (60%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+LHL FGI+++  I  ENP L   EF  + R ++ +A  LE AY  + +P G +GLN
Sbjct: 212 RDENLHLEFGINLLLTILHENPDLQDPEFADEIRNLILQAVELEEAYNRDMLPNGILGLN 271

Query: 62  APSCEQ 67
           A    Q
Sbjct: 272 ADYVNQ 277


>gi|154505112|ref|ZP_02041850.1| hypothetical protein RUMGNA_02625 [Ruminococcus gnavus ATCC 29149]
 gi|153794591|gb|EDN77011.1| hypothetical protein RUMGNA_02625 [Ruminococcus gnavus ATCC 29149]
          Length = 347

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T E  +  + ML E    EIA+ H  +     GL 
Sbjct: 219 RDENTHLWLFRNMILEMKKELPELFTPEHIEILKEMLKEGVRQEIAWGHYVIGNQIAGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                +Y+Q++ N R   +G +P++   T+ P    W+S+  +    K +FFE + T Y 
Sbjct: 279 KEMITEYIQYLGNLRFTNLGFDPIYPDQTQEPDSMRWVSQYSNANMVKTDFFEAKSTAYA 338

Query: 118 QGAEL 122
           +   L
Sbjct: 339 KSTAL 343


>gi|269865524|ref|XP_002651954.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063427|gb|EED42101.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 205

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H +          ++ EA  +E  +  E++P   +G+N
Sbjct: 83  RDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMN 133

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A+R    +G + ++  + NPF +M E I L+ + NFFE R   YQ+G
Sbjct: 134 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 189


>gi|320585888|gb|EFW98567.1| ribonucleotide reductase small subunit [Grosmannia clavigera
           kw1407]
          Length = 378

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 9/114 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q    ++ +A  +E  +  E +P   +G+N
Sbjct: 256 RDEGLHTDFACLLFS-------HLKNRPSKQLIEEIIVDAVKIEQEFLTEALPCALLGMN 308

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
           +   +QY++F+A+R    +G + ++  T NPF +M E I L  + NFFE RV E
Sbjct: 309 STLMKQYIEFVADRLLVALGNDKVYNST-NPFDFM-ENISLGGKTNFFEKRVPE 360


>gi|157325080|ref|YP_001468505.1| gp125 [Listeria phage A511]
 gi|66732769|gb|AAY53360.1| gp57 [Listeria phage P100]
 gi|66733088|gb|AAY52906.1| gp125 [Listeria phage A511]
          Length = 343

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  ENP L T E           A  LE A++ E + +G  G++
Sbjct: 215 RDELAHSKFISELIRAIVGENPELQTDELNDYVYASFRHAVELEQAWSSEVL-QGIEGID 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                 Y+++ AN+    +GL+P+++ +TEN   W+    D   + + +FFE R + Y++
Sbjct: 274 VEEMLDYVKYRANKMLGMLGLQPMYQGHTENSMTWIKAYADNFTETKTDFFEMRNSSYKK 333


>gi|320527966|ref|ZP_08029132.1| ribonucleoside-diphosphate reductase, beta subunit [Solobacterium
           moorei F0204]
 gi|320131592|gb|EFW24156.1| ribonucleoside-diphosphate reductase, beta subunit [Solobacterium
           moorei F0204]
          Length = 349

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES HL    +++ +++ E P L+T E  Q  R M++     EIA+ H  +     GLN
Sbjct: 221 RDESTHLWLFRNILVELQKEEPELFTPENIQMIREMMNTGVEQEIAWGHYVIGDEIPGLN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N R   +G   L+ +Y E P    W+ +  D    K +FFE R + Y 
Sbjct: 281 KQMVTDYIKYLGNTRFATLGFGNLYEEYAEEPESMKWVKQYSDANMVKTDFFEARPSAYA 340

Query: 118 QGAELKWD 125
           +   ++ D
Sbjct: 341 KSGAIEDD 348


>gi|146418573|ref|XP_001485252.1| hypothetical protein PGUG_02981 [Meyerozyma guilliermondii ATCC
           6260]
 gi|146390725|gb|EDK38883.1| hypothetical protein PGUG_02981 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 418

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   +    ++ EA  +E  +  + +P   +G+N
Sbjct: 286 RDEGLHTDFACLLFS-------HLQNRPDPEIVEKIITEAVDIEKEFFTDALPISLLGMN 338

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G + ++    NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 339 CKLMCQYVEFVADRLLVALGNKKIYNVA-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 395


>gi|19113338|ref|NP_596546.1| ribonucleotide reductase small subunit Suc22 [Schizosaccharomyces
           pombe 972h-]
 gi|9297110|sp|P36603|RIR2_SCHPO RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|3378511|emb|CAA20100.1| ribonucleotide reductase small subunit Suc22 [Schizosaccharomyces
           pombe]
          Length = 391

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 9/116 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  ++    ++ EA  +E  Y  + +P   +G+N
Sbjct: 261 RDEGLHTDFACLMFS-------HLKHRPGRKVVEAIIVEAVDIEKEYFTDALPVSLLGMN 313

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
                QY++F+A+R    +G +  +  T NPF +M E I L  + NFFE +V++YQ
Sbjct: 314 KDLMCQYIEFVADRLLVALGNDKYYNVT-NPFDFM-ENISLAGKTNFFEKKVSDYQ 367


>gi|322817571|gb|EFZ25271.1| ribonucleoside-diphosphate reductase small chain, putative
           [Trypanosoma cruzi]
          Length = 337

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F       +  EN ++  K   ++ R ++  A  +E  +  +++P   +G+N
Sbjct: 210 RDEGLHTDFAC-----LLYEN-YIVNKLPTERIREIICSAVDIEREFICDSIPVRLLGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A     Y++F+A+R    +G E  +  ++NPF +M E+I L+ + NFFE +V EYQ+  
Sbjct: 264 ADLMSTYIEFVADRLLVALGNERHYN-SKNPFDFM-EMISLQGKTNFFEKKVGEYQKAG 320


>gi|269865926|ref|XP_002652096.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063168|gb|EED41960.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 330

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H +          ++ EA  +E  +  E++P   +G+N
Sbjct: 219 RDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMN 269

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A+R    +G + ++  + NPF +M E I L+ + NFFE R   YQ+G
Sbjct: 270 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 325


>gi|71416121|ref|XP_810103.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma cruzi
           strain CL Brener]
 gi|70874586|gb|EAN88252.1| ribonucleoside-diphosphate reductase small chain, putative
           [Trypanosoma cruzi]
          Length = 337

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F       +  EN ++  K   ++ R ++  A  +E  +  +++P   +G+N
Sbjct: 210 RDEGLHTDFAC-----LLYEN-YIVNKLPTERIREIICSAVDIEREFICDSIPVRLLGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A     Y++F+A+R    +G E  +  ++NPF +M E+I L+ + NFFE +V EYQ+  
Sbjct: 264 ADLMSTYIEFVADRLLVALGNERHYN-SKNPFDFM-EMISLQGKTNFFEKKVGEYQKAG 320


>gi|269863618|ref|XP_002651286.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220064807|gb|EED42770.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 332

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H +          ++ EA  +E  +  E++P   +G+N
Sbjct: 219 RDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMN 269

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A+R    +G + ++  + NPF +M E I L+ + NFFE R   YQ+G
Sbjct: 270 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 325


>gi|210631890|ref|ZP_03297102.1| hypothetical protein COLSTE_00992 [Collinsella stercoris DSM 13279]
 gi|210159815|gb|EEA90786.1| hypothetical protein COLSTE_00992 [Collinsella stercoris DSM 13279]
          Length = 352

 Score = 57.8 bits (138), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ E P L+T E  +  R ML E    EIA+    +     GL 
Sbjct: 224 RDENTHLWLFRNIILELQKEEPQLFTSENVEMLRQMLEEGVRQEIAWGRYVLGDAIPGLT 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y++++ N R   +G   L++ Y   P    W+S+  +    K +FFE + T Y 
Sbjct: 284 GDMVEGYIKYLGNLRWSSLGFGQLYEGYRSEPEDMAWVSQYSNANMVKTDFFEAKSTAYA 343

Query: 118 QGAEL 122
           +   L
Sbjct: 344 KSTAL 348


>gi|56692684|ref|YP_164142.1| ribonucleoside-diphosphate reductase beta subunit [Singapore
           grouper iridovirus]
 gi|42517396|gb|AAS18062.1| ribonucleoside-diphosphate reductase beta subunit [Singapore
           grouper iridovirus]
          Length = 384

 Score = 57.8 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 6/125 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY---AHETMPKGF 57
           +RDE++H+     +   +  E P L T++  +  +     A  LE A+   A    P   
Sbjct: 253 VRDENIHVEGVSRLFETLCAEYPWLMTEKLVRDCKKDAERAAELEFAFIDLAFSYCP-AL 311

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNFFETRVTE 115
            GL   S + Y+ ++ N R   +GL  L     +ENP PW+  +I+     NFFE  VTE
Sbjct: 312 DGLTPSSVKNYVLYVINLRASHMGLPKLMASAPSENPLPWVKWLIEGADLTNFFENHVTE 371

Query: 116 YQQGA 120
           Y+ G 
Sbjct: 372 YETGG 376


>gi|56418235|gb|AAV91049.1| ribonucleotide reductase beta subunit [Grouper iridovirus]
          Length = 384

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 6/125 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY---AHETMPKGF 57
           +RDE++H+     +   +  E P L T++  +  +     A  LE A+   A    P   
Sbjct: 253 VRDENIHVEGVSRLFETLCAEYPWLMTEKLVRDCKKDAERAAELEFAFIDLAFSYCP-AL 311

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNFFETRVTE 115
            GL   S + Y+ ++ N R   +GL  L     +ENP PW+  +I+     NFFE  VTE
Sbjct: 312 DGLTPSSVKNYVLYVINLRASHMGLPKLMASAPSENPLPWVKWLIEGADLTNFFENHVTE 371

Query: 116 YQQGA 120
           Y+ G 
Sbjct: 372 YETGG 376


>gi|297449|emb|CAA46231.1| ribonucleotide reductase, small subunit [Schizosaccharomyces pombe]
 gi|447147|prf||1913428B ribonucleotide reductase:SUBUNIT=small
          Length = 391

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 9/116 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  ++  + ++ EA  +E  Y  + +P   +G+N
Sbjct: 261 RDEGLHTDFACLMFS-------HLKHRPGRKLLKPIIVEAVDIEKEYFTDALPVSLLGMN 313

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
                QY++F+A+R    +G +  +  T NPF +M E I L  + NFFE +V++YQ
Sbjct: 314 KDLMCQYIEFVADRLLVALGNDKYYNVT-NPFDFM-ENISLAGKTNFFEKKVSDYQ 367


>gi|315497476|ref|YP_004086280.1| ribonucleoside-diphosphate reductase [Asticcacaulis excentricus CB
           48]
 gi|315415488|gb|ADU12129.1| Ribonucleoside-diphosphate reductase [Asticcacaulis excentricus CB
           48]
          Length = 350

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    I + +    E   + TK               LE  +   +   G V G
Sbjct: 200 VRDESLHCEGIIKLYHAFNKETGAV-TKAVADDIVDCCKTVVSLEDKFIDLSFEMGPVEG 258

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     +QY+++IA+ R  Q+ L  +F   ENP PW+  ++   +  NFFE R TEY + 
Sbjct: 259 MTPDDIKQYIRYIADWRLRQLELPEVFGVQENPLPWLQVLLSGVEHANFFEARATEYSKA 318

Query: 120 A 120
           A
Sbjct: 319 A 319


>gi|149182583|ref|ZP_01861054.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           SG-1]
 gi|148849719|gb|EDL63898.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           SG-1]
          Length = 345

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 4/123 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH+     +  ++  ENP   T E +         A  LEI +  + +     GL 
Sbjct: 217 RDEQLHVGLFEKIYKEVLHENPEYDTAELKVFGTQAFKRAAELEIEWGEQIIGNKIDGLL 276

Query: 62  APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEKNFFETRVTEYQQ 118
               E Y++F+AN+R  Q+G + P   Y  NP  W+   + +DL K  +FFE +  +Y +
Sbjct: 277 MSDLEAYIKFMANKRAEQMGFQAPFEGYRTNPLRWIVAYQEVDLGK-TDFFEQKSRQYTK 335

Query: 119 GAE 121
            ++
Sbjct: 336 TSD 338


>gi|209170936|ref|YP_002268082.1| agip52 [Agrotis ipsilon multiple nucleopolyhedrovirus]
 gi|208436527|gb|ACI28754.1| ribonucleotide reductase-2B [Agrotis ipsilon multiple
           nucleopolyhedrovirus]
          Length = 313

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 65/118 (55%), Gaps = 10/118 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKS-RTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE LH +F   +  + ++      T++    +  +M  EA  +E  +    +P   +G+
Sbjct: 191 RDEGLHTDFAC-LYYKTRV------TEKLDSDTILSMFKEAVAIEKEFFTAALPVELLGM 243

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           NA S  +Y++F+A+R   Q+G +P +    NPF +M+  I L+ + NFFE RV EY++
Sbjct: 244 NAQSMCEYIEFVADRLLVQLG-QPKYFNARNPFEFMNN-ISLEGKTNFFEKRVGEYKR 299


>gi|254418345|ref|ZP_05032069.1| ribonucleoside-diphosphate reductase, beta subunit [Brevundimonas
           sp. BAL3]
 gi|196184522|gb|EDX79498.1| ribonucleoside-diphosphate reductase, beta subunit [Brevundimonas
           sp. BAL3]
          Length = 349

 Score = 57.4 bits (137), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    I + +    E   + TK               +E  +       G V G
Sbjct: 201 VRDESLHCEGIIKLYHAFNKETGAV-TKAVADDIVDCCKTVVNMEDRFIDLAFEMGSVQG 259

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     +QY++FIA+ R  Q+ L  ++   ENP PW+  ++   +  NFFE R TEY + 
Sbjct: 260 MTPEDIKQYIRFIADWRLRQLKLPEVYGVKENPLPWLQSLLSGVEHANFFEARATEYSKA 319

Query: 120 A 120
           A
Sbjct: 320 A 320


>gi|257062099|ref|YP_003139987.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8802]
 gi|256592265|gb|ACV03152.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8802]
          Length = 355

 Score = 57.0 bits (136), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I + +   PH   + +      M   A   E  + +  +    +G+ 
Sbjct: 227 RDELSHVRLYQKLIPEARKVFPHSVDQIYD-----MFDRAVKYECQWTNHIVGNNILGIT 281

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVT 114
             S EQY +++AN R   IGL+PL+   KY ++P+  +    D KKE     NFFE  VT
Sbjct: 282 EASTEQYTKYLANIRLRSIGLDPLYPDIKYNKSPYTHLERFSDTKKEAHTKANFFEATVT 341

Query: 115 EYQQGAELK-WD 125
            Y   + +  WD
Sbjct: 342 SYVMSSGITGWD 353


>gi|218249013|ref|YP_002374384.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8801]
 gi|218169491|gb|ACK68228.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8801]
          Length = 344

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I + +   PH   + +      M   A   E  + +  +    +G+ 
Sbjct: 216 RDELSHVRLYQKLIPEARKVFPHSVDQIYD-----MFDRAVKYECQWTNHIVGNNILGIT 270

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVT 114
             S EQY +++AN R   IGL+PL+   KY ++P+  +    D KKE     NFFE  VT
Sbjct: 271 EASTEQYTKYLANIRLRSIGLDPLYPDIKYNKSPYTHLERFSDTKKEAHTKANFFEATVT 330

Query: 115 EYQQGAELK-WD 125
            Y   + +  WD
Sbjct: 331 SYVMSSGITGWD 342


>gi|282879357|ref|ZP_06288101.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           buccalis ATCC 35310]
 gi|282881358|ref|ZP_06290037.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           timonensis CRIS 5C-B1]
 gi|281298554|gb|EFA90979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           buccalis ATCC 35310]
 gi|281304764|gb|EFA96845.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           timonensis CRIS 5C-B1]
          Length = 347

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P ++T E  +    M+ E    EIA+    +     GLN
Sbjct: 219 RDENTHLWLFRNIIKELKKEEPEMFTPEKVKVYEEMMREGVRQEIAWGQYVIGNDIQGLN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
           A     Y+ ++ N R H +G + L++  +       W+++  D    K +FFE + T Y 
Sbjct: 279 AQMVTDYIHYLGNLRWHSLGFDYLYEDNQKEPEDMKWVAQYSDPNMVKTDFFEAKSTAYA 338

Query: 118 QGAELKWD 125
           +   ++ D
Sbjct: 339 KSTAIEDD 346


>gi|68485781|ref|XP_713171.1| hypothetical protein CaO19.9424 [Candida albicans SC5314]
 gi|68485874|ref|XP_713125.1| hypothetical protein CaO19.1868 [Candida albicans SC5314]
 gi|46434604|gb|EAK94008.1| hypothetical protein CaO19.1868 [Candida albicans SC5314]
 gi|46434651|gb|EAK94054.1| hypothetical protein CaO19.9424 [Candida albicans SC5314]
 gi|238883648|gb|EEQ47286.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
           albicans WO-1]
          Length = 394

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H ++   + + +K        K   +    ++ EA  +E  Y  + +P   +G+N
Sbjct: 266 RDEGIHTDYACLLFSYLK-------NKPSSEIIEKIITEAVDIEKEYFSDALPVSLLGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R     G +  +  T NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 319 CDLMCQYVEFVADRLLVAFGNKKYYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 375


>gi|90592764|ref|YP_529717.1| RR2B [Agrotis segetum nucleopolyhedrovirus]
 gi|71559214|gb|AAZ38213.1| RR2B [Agrotis segetum nucleopolyhedrovirus]
          Length = 313

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 8/117 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F           N  +  K       +M  EA  +E  +    +P   +G+N
Sbjct: 191 RDEGLHTDFAC------LYYNTRVHDKLAPDTVLSMFKEAVAIEKEFFTAALPAALLGMN 244

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           A S   Y++F+A+R   Q+  +P   +  NPF +M+  I L+ + NFFE RV EY++
Sbjct: 245 AQSMCDYIEFVADRLLVQLH-QPKHFHARNPFEFMNN-ISLEGKTNFFEKRVGEYKR 299


>gi|19703451|ref|NP_603013.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|19713529|gb|AAL94312.1| Ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 348

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EI +    +    +G+ 
Sbjct: 220 RDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWTEHIIGNRVLGIT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
           + + E Y +++AN R   +GLEPLF  + +NP+  +    D + E     NFFE  VT Y
Sbjct: 277 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 336

Query: 117 QQGAEL 122
              + +
Sbjct: 337 NMSSSI 342


>gi|295691241|ref|YP_003594934.1| Ribonucleoside-diphosphate reductase [Caulobacter segnis ATCC
           21756]
 gi|295433144|gb|ADG12316.1| Ribonucleoside-diphosphate reductase [Caulobacter segnis ATCC
           21756]
          Length = 346

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH +  I + +    E   + TK               LE  +       G + G
Sbjct: 198 IRDESLHCDGIIKLYHAFNKETGAV-TKAVADDIVDCCKHVVGLEDKFIDLAFEAGEIQG 256

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     + Y++FIA+ R  Q+ L  ++   ENP PW+  ++   +  NFFE R TEY + 
Sbjct: 257 MTPDDIKSYIRFIADWRLRQLQLPEVYGVKENPLPWLQSLLSGVEHANFFEARATEYSKA 316

Query: 120 A 120
           A
Sbjct: 317 A 317


>gi|296329016|ref|ZP_06871523.1| ribonucleotide-diphosphate reductase beta subunit [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
 gi|296153909|gb|EFG94720.1| ribonucleotide-diphosphate reductase beta subunit [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
          Length = 348

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EI +    +    +G+ 
Sbjct: 220 RDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWTEHIIGNRVLGIT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
           + + E Y +++AN R   +GLEPLF  + +NP+  +    D + E     NFFE  VT Y
Sbjct: 277 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 336

Query: 117 QQGAEL 122
              + +
Sbjct: 337 NMSSSI 342


>gi|294784669|ref|ZP_06749957.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_27]
 gi|294486383|gb|EFG33745.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_27]
          Length = 344

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EI +    +    +G+ 
Sbjct: 216 RDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
           + + E Y +++AN R   +GLEPLF  + +NP+  +    D + E     NFFE  VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332

Query: 117 QQGAEL 122
              + +
Sbjct: 333 NMSSSI 338


>gi|237743586|ref|ZP_04574067.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 7_1]
 gi|229432617|gb|EEO42829.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 7_1]
          Length = 344

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EI +    +    +G+ 
Sbjct: 216 RDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
           + + E Y +++AN R   +GLEPLF  + +NP+  +    D + E     NFFE  VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332

Query: 117 QQGAEL 122
              + +
Sbjct: 333 NMSSSI 338


>gi|292397811|ref|YP_003517877.1| RR2b [Lymantria xylina MNPV]
 gi|291065528|gb|ADD73846.1| RR2b [Lymantria xylina MNPV]
          Length = 338

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  +    + R ++ +A  +E  +  E +P   +GLN
Sbjct: 214 RDEGLHCDFACLMFK-------HLVQRPSAARVREIVTDAVAIEQRFLTEALPVRLLGLN 266

Query: 62  APSCEQYMQFIANR-RCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
             +  QY++F+A+R     IG +     T NP  +M+ +I L+ + NFFE +V EYQ+
Sbjct: 267 CETMSQYIEFVADRLLVDLIGTKHY--NTANPLDFMT-LISLEGKTNFFEKKVGEYQK 321


>gi|9631087|ref|NP_047757.1| ribonucleotide reductase small subunit homolog [Lymantria dispar
           MNPV]
 gi|3822355|gb|AAC70306.1| ribonucleotide reductase small subunit homolog [Lymantria dispar
           MNPV]
          Length = 348

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  +    + R ++ +A  +E  +  E +P   +GLN
Sbjct: 224 RDEGLHCDFACLLFK-------HLVQRPSAARVREIVTDAVAIEQRFLTEALPVRLLGLN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
             +  QY++F+A+R   ++     +  T NP  +M+ +I L+ + NFFE +V EYQ+
Sbjct: 277 CETMSQYIEFVADRLLLELVGAKHYN-TPNPLDFMN-LISLEGKTNFFEKKVGEYQK 331


>gi|47208564|emb|CAF96041.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 352

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 2/71 (2%)

Query: 48  YAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107
           +  E +P   +G+N    +QY++F+A+R    +GL  ++   ENPF +M E I L+ + N
Sbjct: 266 FLTEALPVDLIGMNRCLMKQYIEFVADRLFADLGLAKMYN-AENPFDFM-EAISLEGKTN 323

Query: 108 FFETRVTEYQQ 118
           FFE RV EYQ+
Sbjct: 324 FFEKRVAEYQR 334


>gi|256846215|ref|ZP_05551673.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_36A2]
 gi|256719774|gb|EEU33329.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_36A2]
          Length = 344

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EI +    +    +G+ 
Sbjct: 216 RDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
           + + E Y +++AN R   +GLEPLF  + +NP+  +    D + E     NFFE  VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332

Query: 117 QQGAEL 122
              + +
Sbjct: 333 NMSSSI 338


>gi|329888543|ref|ZP_08267141.1| ribonucleotide reductase, small chain family protein [Brevundimonas
           diminuta ATCC 11568]
 gi|328847099|gb|EGF96661.1| ribonucleotide reductase, small chain family protein [Brevundimonas
           diminuta ATCC 11568]
          Length = 348

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 67/143 (46%), Gaps = 28/143 (19%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHE-----ATLLE-----IAYAH 50
           +RDESLH   GI       I+  H + KE    ++ +  +      T++E     I  A 
Sbjct: 201 VRDESLHCE-GI-------IKLYHAFNKETGAVTKAVADDIVDCCKTVIEMEDKFIDLAF 252

Query: 51  ETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFE 110
           E  P    G+     + Y++FIA+ R  Q+ L  ++  TENP PW+  ++   +  NFFE
Sbjct: 253 EMGPVN--GMTPDDIKAYIRFIADWRLRQLHLPEVYGVTENPLPWLQALLSGVEHANFFE 310

Query: 111 TRVTEYQQ--------GAELKWD 125
            R TEY +        GA+  WD
Sbjct: 311 ARATEYSKAATQGAWHGADGVWD 333


>gi|22788780|ref|NP_690492.1| Rr2 [Heliothis zea virus 1]
 gi|22671540|gb|AAN04367.1|AF451898_72 Rr2 [Heliothis zea virus 1]
          Length = 333

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 67/118 (56%), Gaps = 8/118 (6%)

Query: 2   RDESLHLNFGIDVI-NQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE LH +F I +  N ++ E      +   +K   ++ +A  +E  +  E++P   +G+
Sbjct: 205 RDEGLHCDFAILLFRNYLRPE-----CRSSDEKVINIVTDAVRIEQEFLTESLPVSMIGM 259

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           N     +Y++F+A+R  +++    ++   +NPF +M+  I L+ + NFFE +V+EY++
Sbjct: 260 NCKLMCEYIEFVADRLLYELIGRKIYN-AKNPFDFMTS-ISLEGKTNFFEKKVSEYKR 315


>gi|322378346|ref|ZP_08052803.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           suis HS1]
 gi|322379688|ref|ZP_08054002.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           suis HS5]
 gi|321147887|gb|EFX42473.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           suis HS5]
 gi|321149232|gb|EFX43675.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           suis HS1]
          Length = 342

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL+   ++IN ++ E   L++ E   +   M  +A  LE A+         + L+
Sbjct: 218 RDELTHLHLFQNMINTLRKERSDLFSPELIAEVNEMFKQAVDLESAWGAYITQGEMLDLS 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
                 Y +++A+ R   +GL  L+  ++NP  W+ +  +    + NFFE +V+ Y +G+
Sbjct: 278 PQILRTYTEYLADTRLAVVGLPKLYN-SQNPIKWVDQFANFNSHRSNFFEAKVSNYSKGS 336


>gi|269866968|ref|XP_002652448.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220062479|gb|EED41609.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 100

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 2/85 (2%)

Query: 35  RTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP 94
           + ++ EA  +E  +  E++P   +G+N     QY++F+A+R    +G + ++  + NPF 
Sbjct: 2   KDIVREAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPFD 60

Query: 95  WMSEVIDLKKEKNFFETRVTEYQQG 119
           +M E I L+ + NFFE R   YQ+G
Sbjct: 61  FM-ENISLQGKTNFFERREANYQKG 84


>gi|313887688|ref|ZP_07821370.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
           harei ACS-146-V-Sch2b]
 gi|312846297|gb|EFR33676.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
           harei ACS-146-V-Sch2b]
          Length = 346

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 8/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I ++K E P ++T E  +K + ML +    EIA+    +     GLN
Sbjct: 218 RDENTHLWLFRSIILEMKKEEPEIFTDENIEKYKEMLKKGVEEEIAWGKYVIGDEIKGLN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKKEK-NFFETRVTE 115
               E Y+ ++ N R   +G   LF   EN        W+SE  D  + K +FFE R + 
Sbjct: 278 EKMIEDYIMYLGNLRSRNLGFGNLF--DENIDEPESMKWVSEYSDPNQIKTDFFEARPSA 335

Query: 116 YQQGAELKWD 125
           Y + + ++ D
Sbjct: 336 YSKSSVIEDD 345


>gi|258567064|ref|XP_002584276.1| ribonucleoside-diphosphate reductase small chain [Uncinocarpus
           reesii 1704]
 gi|237905722|gb|EEP80123.1| ribonucleoside-diphosphate reductase small chain [Uncinocarpus
           reesii 1704]
          Length = 401

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       H+  +        ++ EA  +E  +  + +P   +G+N
Sbjct: 265 RDEGLHTDFACLLFS-------HIRHRPTPAAVEAIITEAVEIEKEFLTDALPCALLGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 318 SKLMCQYIEFVADRLLVALGNKKFYHAT-NPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 374


>gi|242777635|ref|XP_002479074.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218722693|gb|EED22111.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 406

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   +    ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHTDFACLLFS-------HLNNRPNPKVIEDIIVDAVAIEQEFLTDALPCSLLGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  T NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYYNST-NPFDFM-ENISLAGKTNFFEKRVGDYQKAG 377


>gi|213402763|ref|XP_002172154.1| ribonucleoside-diphosphate reductase small chain
           [Schizosaccharomyces japonicus yFS275]
 gi|212000201|gb|EEB05861.1| ribonucleoside-diphosphate reductase small chain
           [Schizosaccharomyces japonicus yFS275]
          Length = 392

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 9/116 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + + +K    H   K+  ++   ++ EA  +E  Y  + +P   +G+N
Sbjct: 263 RDEGVHTDFACLMFSHLK----HRPGKKVVER---IIIEAVNIEKEYFTDALPVYLLGMN 315

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
                QY++F+A+R    +G E  +  T NPF +M E I L  + NFFE +V++YQ
Sbjct: 316 CDLMCQYIEFVADRLLLSLGNEKYYNVT-NPFDFM-ENISLAGKTNFFEKKVSDYQ 369


>gi|331083185|ref|ZP_08332301.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 6_1_63FAA]
 gi|330404574|gb|EGG84114.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 6_1_63FAA]
          Length = 347

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I Q+K E P L+TKE  Q  + ML E    EIA+ H  +     G++
Sbjct: 219 RDENTHLWLFRNMILQLKEEEPELFTKENIQALKEMLMEGVEQEIAWGHYVLGDDIPGIS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                +Y++++ N R   +G + ++  Y + P    W+S   +    K +FFE + T Y 
Sbjct: 279 KEMITEYIKYLGNLRFTGLGFDVVYPGYEKEPESMKWVSYYSNANMVKTDFFEAKSTAYA 338

Query: 118 QGAEL 122
           +   L
Sbjct: 339 KSTAL 343


>gi|62866936|gb|AAY17359.1| ribonucleotide reductase small subunit [Haemonchus contortus]
          Length = 374

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 58/99 (58%), Gaps = 2/99 (2%)

Query: 24  HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE 83
           H+  K  Q++   ++ +A  +E  +  E++P   +G+N     QY++++A+    ++G E
Sbjct: 264 HIKNKLSQERIYYIIRDAVAIEQEFLSESLPVDMIGMNCRLMCQYIEYVADHLLVELGCE 323

Query: 84  PLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122
            + K ++NPF +M E I +  + NFFE +V+EYQ+   L
Sbjct: 324 KICK-SKNPFDFM-ENISIDGKTNFFEKKVSEYQRPGVL 360


>gi|209972895|ref|YP_002300342.1| gp4 [Bacillus phage SPO1]
 gi|209871215|gb|ACI90971.1| gp4 [Bacillus phage SPO1]
          Length = 346

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 4/123 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F   V+  +  E P L T+E       M+ EA  LEI Y+ + +     GL+
Sbjct: 218 RDEVAHAYFFSQVLRYLMAERPELHTEENVNFIYDMMQEAADLEIEYSQKIL-HDIPGLD 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL---KKEKNFFETRVTEYQQ 118
               E Y++ + NRR   +GL+ ++   EN  PWM    D    + + + FE +   Y++
Sbjct: 277 LEELEGYIKSLCNRRLRGVGLDDIYAGVENSMPWMIAFDDGSNNQTKSDMFEQKSRNYKK 336

Query: 119 GAE 121
             E
Sbjct: 337 VDE 339


>gi|260589755|ref|ZP_05855668.1| ribonucleoside-diphosphate reductase, beta subunit [Blautia
           hansenii DSM 20583]
 gi|260539995|gb|EEX20564.1| ribonucleoside-diphosphate reductase, beta subunit [Blautia
           hansenii DSM 20583]
          Length = 359

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I Q+K E P L+TKE  Q  + ML E    EIA+ H  +     G++
Sbjct: 231 RDENTHLWLFRNMILQLKEEEPELFTKENIQALKEMLMEGVEQEIAWGHYVLGDDIPGIS 290

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                +Y++++ N R   +G + ++  Y + P    W+S   +    K +FFE + T Y 
Sbjct: 291 KEMITEYIKYLGNLRFTGLGFDVVYPGYEKEPESMKWVSYYSNANMVKTDFFEAKSTAYA 350

Query: 118 QGAEL 122
           +   L
Sbjct: 351 KSTAL 355


>gi|297587320|ref|ZP_06945965.1| ribonucleotide-diphosphate reductase beta subunit [Finegoldia magna
           ATCC 53516]
 gi|297575301|gb|EFH94020.1| ribonucleotide-diphosphate reductase beta subunit [Finegoldia magna
           ATCC 53516]
          Length = 354

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I  +K E P L+T+E   + + M+ + +  EI +A   + +   GL+
Sbjct: 226 RDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGSEAEIEWAKYVIGEKIQGLS 285

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y++++ N R   +G   ++   E   P   W+SE  D  K K +FFE + + Y 
Sbjct: 286 IKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIKTDFFEAKPSAYS 345

Query: 118 QGAELKWD 125
           + A ++ D
Sbjct: 346 KSAIIEDD 353


>gi|197103810|ref|YP_002129187.1| ribonucleoside-diphosphate reductase, beta subunit
           [Phenylobacterium zucineum HLK1]
 gi|196477230|gb|ACG76758.1| ribonucleoside-diphosphate reductase, beta subunit
           [Phenylobacterium zucineum HLK1]
          Length = 350

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    I + +    E   + T+               LE  +       G V G
Sbjct: 201 VRDESLHCEGIIKLYHAFNKETGAV-TQAVADDIVDCCKTVVGLEDKFIDLAFEAGEVQG 259

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     +QY++FIA+ R  Q+ L  ++   ENP PW+  ++   +  NFFE R TEY + 
Sbjct: 260 MTPDDIKQYIRFIADWRLKQLHLPQVYGIKENPLPWLQSMLSGVEHANFFEARATEYSKA 319

Query: 120 A 120
           A
Sbjct: 320 A 320


>gi|227871657|ref|ZP_03990072.1| ribonucleoside-diphosphate reductase [Oribacterium sinus F0268]
 gi|227842499|gb|EEJ52714.1| ribonucleoside-diphosphate reductase [Oribacterium sinus F0268]
          Length = 347

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL F  +++ ++K E P L+ +    +   M+ +    EIA+    +     GLN
Sbjct: 219 RDENTHLWFFRNMLLELKKEEPELFDEAHIAEITEMVKKGVEQEIAWGQYVIGDSIPGLN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y++++ N R   +GL  L++ Y + P    W+S+  D    K +FFE R T Y 
Sbjct: 279 GKMVEDYIRYLGNLRYRSLGLPNLYEGYEKEPESMKWVSQYADANMVKTDFFEARSTAYA 338

Query: 118 QGAELKWD 125
           +   ++ D
Sbjct: 339 KSTAIEDD 346


>gi|322499081|emb|CBZ34153.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 269

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 58/99 (58%), Gaps = 2/99 (2%)

Query: 22  NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIG 81
           N H+  K  +++   ++ +A  +E  +  + +P   +G+NA    QY++F+A+R    +G
Sbjct: 156 NSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMNAELMAQYIEFVADRLLVSLG 215

Query: 82  LEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            E  ++ T+ PF +M E+I L+ + NFFE +V EYQ+  
Sbjct: 216 EEKHYRSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAG 252


>gi|73974200|ref|XP_858061.1| PREDICTED: similar to ribonucleotide reductase M2 B (TP53
           inducible) isoform 3 [Canis familiaris]
          Length = 338

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 22/119 (18%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++  A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+                 ENPF +M E I L+ + NFFE RV EYQ+ A
Sbjct: 279 CVLMKQYIEFVFQ--------------AENPFDFM-ENISLEGKTNFFEKRVAEYQRFA 322


>gi|17567153|ref|NP_508269.1| hypothetical protein F19G12.2 [Caenorhabditis elegans]
 gi|10864352|gb|AAG24065.1| Hypothetical protein F19G12.2 [Caenorhabditis elegans]
          Length = 668

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 52/82 (63%), Gaps = 2/82 (2%)

Query: 37  MLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
           +++E+ L+E  +  E++P   +G+N     +Y++F+A+    ++G    +  T+NPF +M
Sbjct: 571 IINESVLVEQDFVRESLPTNLIGMNQHMMCKYVEFVADLLLEELGYSKRYN-TKNPFDFM 629

Query: 97  SEVIDLKKEKNFFETRVTEYQQ 118
            E I ++ + NFFE RV+EYQ+
Sbjct: 630 -ENISIEGKTNFFEKRVSEYQR 650


>gi|159030376|emb|CAO91271.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 355

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I +     PH   + ++     M   A   E  + +  +    +G+ 
Sbjct: 227 RDELSHVRLYQKLIPEAMAIFPHSVEQIYE-----MFDSAVKHECCWTNHIVGNDILGIT 281

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVT 114
             S EQY +++AN R   IGLEPL+   KY ++P+  +    D KKE     NFFE  VT
Sbjct: 282 EYSTEQYTKYLANIRLKAIGLEPLYREEKYNKSPYNHLERFSDTKKEGHTKANFFEATVT 341

Query: 115 EYQQGAELK-WD 125
            Y   + L  WD
Sbjct: 342 SYVMSSGLTGWD 353


>gi|67921622|ref|ZP_00515140.1| Ribonucleoside-diphosphate reductase [Crocosphaera watsonii WH
           8501]
 gi|67856734|gb|EAM51975.1| Ribonucleoside-diphosphate reductase [Crocosphaera watsonii WH
           8501]
          Length = 321

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I + +   PH   + ++     M   A   E  + +  +    +G+ 
Sbjct: 193 RDELSHVRLYQKLIPEARKVFPHSVEQIYE-----MFDMAVNYECRWTNHIVGNNILGIT 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK----EKNFFETRVT 114
             S E+Y +++AN R   IGLEPL+   KY+++P+  +    D KK    + NFFE  VT
Sbjct: 248 ESSTEKYTKYLANIRLRSIGLEPLYPEPKYSKSPYTHLERFSDTKKAAHTKANFFEATVT 307

Query: 115 EYQQGAELK-WD 125
            Y   + L  WD
Sbjct: 308 SYVMSSGLTGWD 319


>gi|299747484|ref|XP_001837064.2| ribonucleotide reductase small subunit [Coprinopsis cinerea
           okayama7#130]
 gi|298407540|gb|EAU84681.2| ribonucleotide reductase small subunit [Coprinopsis cinerea
           okayama7#130]
          Length = 379

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   +   ++ + PH            ++ EA  +E  +  + +P   +G+N
Sbjct: 249 RDEGMHTDFACLLFAYLR-KRPH------SDTILAIVTEAVEIEKEFFSDALPVSLIGMN 301

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +    QY++F+A+R    +G +  + + +NPF +M E+I ++ + NFFE RV++Y + 
Sbjct: 302 SSLMNQYIEFVADRLLTSLGNDKHY-HVDNPFDFM-ELISMEGKANFFEKRVSDYAKA 357


>gi|291461082|ref|ZP_06026838.2| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           periodonticum ATCC 33693]
 gi|291379059|gb|EFE86577.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           periodonticum ATCC 33693]
          Length = 348

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P  ++ E      +M   A   EI +    +    +G+ 
Sbjct: 220 RDELSHVVLFRSIVKEIKNDYPEFFSAE---TIYSMFKTAVEQEINWTEHIIGNRVLGIT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
           + + E Y +++AN R   +GLEPL+  + +NP+  +    D + E     NFFE  VT Y
Sbjct: 277 SQTTEAYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 336

Query: 117 QQGAEL 122
              + +
Sbjct: 337 NMSSSI 342


>gi|15639047|ref|NP_218493.1| ribonucleotide-diphosphate reductase subunit beta [Treponema
           pallidum subsp. pallidum str. Nichols]
 gi|189025287|ref|YP_001933059.1| ribonucleotide-diphosphate reductase subunit beta [Treponema
           pallidum subsp. pallidum SS14]
 gi|6093976|sp|O83092|RIR2_TREPA RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|3322311|gb|AAC65049.1| ribonucleoside-diphosphate reductase, subunit beta (nrdB)
           [Treponema pallidum subsp. pallidum str. Nichols]
 gi|189017862|gb|ACD70480.1| ribonucleoside-diphosphate reductase, subunit beta [Treponema
           pallidum subsp. pallidum SS14]
 gi|291059468|gb|ADD72203.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           pallidum subsp. pallidum str. Chicago]
          Length = 351

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P ++T    +  R M+ E    EI +    +     GLN
Sbjct: 223 RDENTHLWLFRSIIQELQKEEPQVFTARNVRLFRDMIREGCEQEIKWGDYVIGDQIPGLN 282

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N RC  +G EPL+   +       W+S+  +    K +FFE + T Y 
Sbjct: 283 RHMVADYIRYLGNLRCENLGFEPLYEGHRVEPESMSWVSQYSNANLIKTDFFEAKSTAYA 342

Query: 118 QGAEL 122
           + + +
Sbjct: 343 KSSAM 347


>gi|319785673|ref|YP_004145148.1| ribonucleotide reductase [Pseudoxanthomonas suwonensis 11-1]
 gi|317464185|gb|ADV25917.1| ribonucleotide reductase [Pseudoxanthomonas suwonensis 11-1]
          Length = 354

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T E           A  LE  +  E +  G  G++
Sbjct: 226 RDELAHTKFISEVIRAIVGENPELQTDELADYVHLAFRHAIELETQWTGEVL-DGIDGID 284

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L+ + T+N  PW+    D   + + +FFE R   Y++
Sbjct: 285 VDEMIRYVKYRANKMAGMLGIESLYTETTDNVMPWIRAYADNFTETKTDFFEMRNASYKK 344


>gi|269861752|ref|XP_002650564.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220065950|gb|EED43491.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 106

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 2/83 (2%)

Query: 37  MLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
           ++ EA  +E  +  E++P   +G+N     QY++F+A+R    +G + ++  + NPF +M
Sbjct: 10  IVREAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM 68

Query: 97  SEVIDLKKEKNFFETRVTEYQQG 119
            E I L+ + NFFE R   YQ+G
Sbjct: 69  -ENISLQGKTNFFERREANYQKG 90


>gi|237738722|ref|ZP_04569203.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 2_1_31]
 gi|229423825|gb|EEO38872.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 2_1_31]
          Length = 344

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P  ++ E      +M   A   EI +    +    +G+ 
Sbjct: 216 RDELSHVVLFRSIVKEIKNDYPEFFSAE---TIYSMFKTAVEQEINWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
           + + E Y +++AN R   +GLEPL+  + +NP+  +    D + E     NFFE  VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332

Query: 117 QQGAEL 122
              + +
Sbjct: 333 NMSSSI 338


>gi|119485472|ref|ZP_01619800.1| hypothetical protein L8106_10031 [Lyngbya sp. PCC 8106]
 gi|119457228|gb|EAW38354.1| hypothetical protein L8106_10031 [Lyngbya sp. PCC 8106]
          Length = 359

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I +     PH   + ++     M   A   E  + +  + +  +G+ 
Sbjct: 231 RDELSHVRLYQKLIPEAMQTFPHSVEQIYE-----MFDTAVQHECRWTNHIVGRNILGIT 285

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVT 114
             S EQY +++AN R   IGL+PL+   +Y+++P+  +    D KKE     NFFE  VT
Sbjct: 286 ETSTEQYTKYLANARLRSIGLKPLYTDPRYSKSPYTHLERFSDTKKEAHTKANFFEASVT 345

Query: 115 EYQQGAEL-KWD 125
            Y   + +  WD
Sbjct: 346 SYVMSSGVGGWD 357


>gi|282174133|ref|YP_003358235.1| ORF96 [Anguillid herpesvirus 1]
 gi|281308976|gb|ADA57859.1| ORF96 [Anguillid herpesvirus 1]
          Length = 328

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 8/117 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  K   ++   ++ EA  +E  +  E +P   +G+N
Sbjct: 202 RDEGLHCDFACLLFKD------HILGKPGYERVSQIVTEAVEIEKEFLSEALPVRLLGIN 255

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                 Y++F+A+R    +G  P   + +NPF +M E I ++ + NFFE  V++Y++
Sbjct: 256 CEQMCSYIEFVADRLLAALGF-PKRYHVKNPFGFM-ESISMEGKTNFFEKNVSQYKK 310


>gi|16332312|ref|NP_443040.1| hypothetical protein slr0591 [Synechocystis sp. PCC 6803]
 gi|1653942|dbj|BAA18852.1| slr0591 [Synechocystis sp. PCC 6803]
          Length = 355

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 8/97 (8%)

Query: 37  MLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPF 93
           M  +A   E  + +  +    +G+   S EQY +++AN R   IGL+PL+   +Y ++P+
Sbjct: 257 MFDKAVEFECRWTNHIVGNNILGITESSTEQYTKYLANSRLRAIGLDPLYTDARYGKSPY 316

Query: 94  PWMSEVIDLKKE----KNFFETRVTEYQQGAELK-WD 125
             +    D KKE     NFFE  VT Y   + +  WD
Sbjct: 317 THLERFSDTKKEAHTKANFFEATVTSYVMSSGVSGWD 353


>gi|284929768|ref|YP_003422290.1| ribonucleotide reductase, subunit beta [cyanobacterium UCYN-A]
 gi|284810212|gb|ADB95909.1| ribonucleotide reductase, beta subunit [cyanobacterium UCYN-A]
          Length = 354

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I + +   PH   + ++     M   A   E  + +  +    +G+ 
Sbjct: 226 RDELSHVRLYQKLIPEARKVFPHSTEQIYE-----MFDTAVNHECRWTNHIVGSNILGIT 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVT 114
             S EQY +++AN R   IGLEPL+   ++T++P+  +    D KK+     NFFE+ VT
Sbjct: 281 ESSTEQYTKYLANIRLRSIGLEPLYTGEEFTKSPYSHLERFSDTKKDGHTKANFFESTVT 340

Query: 115 EYQQGAELK-WD 125
            Y   + +  WD
Sbjct: 341 SYVMSSGVSGWD 352


>gi|303234233|ref|ZP_07320879.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
           magna BVS033A4]
 gi|302494774|gb|EFL54534.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
           magna BVS033A4]
          Length = 347

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I  +K E P L+T+E   + + M+ +    EI +A   + +   GL+
Sbjct: 219 RDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGAEAEIEWAKYVIGEKIQGLS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y++++ N R   +G   ++   E   P   W+SE  D  K K +FFE + + Y 
Sbjct: 279 IKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIKTDFFEAKPSAYS 338

Query: 118 QGAELKWD 125
           + A ++ D
Sbjct: 339 KSAIIEDD 346


>gi|302379704|ref|ZP_07268189.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
           magna ACS-171-V-Col3]
 gi|302312611|gb|EFK94607.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
           magna ACS-171-V-Col3]
          Length = 347

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I  +K E P L+T+E   + + M+ +    EI +A   + +   GL+
Sbjct: 219 RDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGAEAEIEWAKYVIGEKIQGLS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y++++ N R   +G   ++   E   P   W+SE  D  K K +FFE + + Y 
Sbjct: 279 IKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIKTDFFEAKPSAYS 338

Query: 118 QGAELKWD 125
           + A ++ D
Sbjct: 339 KSAIIEDD 346


>gi|237742881|ref|ZP_04573362.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 4_1_13]
 gi|229430529|gb|EEO40741.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 4_1_13]
          Length = 344

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EI +    +    +G+ 
Sbjct: 216 RDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
           + + E Y +++AN R   +GLEPL+  + +NP+  +    D + E     NFFE  VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332

Query: 117 QQGAEL 122
              + +
Sbjct: 333 NMSSSI 338


>gi|222824493|ref|YP_002576067.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           lari RM2100]
 gi|222539714|gb|ACM64815.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           lari RM2100]
          Length = 340

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+      K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERADLFNDTNVSKIYDMFKKAGELEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   I L+ ++   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLIAINLDKIYN-VKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334


>gi|194319980|pdb|2VUX|A Chain A, Human Ribonucleotide Reductase, Subunit M2 B
 gi|194319981|pdb|2VUX|B Chain B, Human Ribonucleotide Reductase, Subunit M2 B
          Length = 326

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 9/106 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 230 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 282

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + N
Sbjct: 283 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTN 326


>gi|169824933|ref|YP_001692544.1| ribonucleotide-diphosphate reductase subunit beta [Finegoldia magna
           ATCC 29328]
 gi|167831738|dbj|BAG08654.1| ribonucleoside-diphosphate reductase beta subunit [Finegoldia magna
           ATCC 29328]
          Length = 354

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I  +K E P L+T+E   + + M+ +    EI +A   + +   GL+
Sbjct: 226 RDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGAEAEIEWAKYVIGEKIQGLS 285

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y++++ N R   +G   ++   E   P   W+SE  D  K K +FFE + + Y 
Sbjct: 286 IKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIKTDFFEAKPSAYS 345

Query: 118 QGAELKWD 125
           + A ++ D
Sbjct: 346 KSAIIEDD 353


>gi|71033209|ref|XP_766246.1| ribonucleotide-diphosphate reductase small subunit [Theileria parva
           strain Muguga]
 gi|68353203|gb|EAN33963.1| ribonucleotide-diphosphate reductase small subunit, putative
           [Theileria parva]
          Length = 308

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 57/105 (54%), Gaps = 18/105 (17%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +FG  + + +K + P       ++  + ++ EA ++E +Y  +++P   +G+N
Sbjct: 201 RDEGLHADFGCFIYHNLKHKLP-------EEAVQQIIKEAVVVERSYICDSLPCDLIGMN 253

Query: 62  A-----PSC-----EQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
           +       C      QY++F+A+R    +G+ P++  T NPF WM
Sbjct: 254 SRKKILTHCLIELMTQYIEFVADRLLQALGVRPVYNVT-NPFDWM 297


>gi|307151334|ref|YP_003886718.1| ribonucleotide reductase [Cyanothece sp. PCC 7822]
 gi|306981562|gb|ADN13443.1| ribonucleotide reductase [Cyanothece sp. PCC 7822]
          Length = 355

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I +     PH   K ++     M   A   E  + +  +    +G+ 
Sbjct: 227 RDELSHVRLYQKIIAEAMQTFPHSVDKVYE-----MFDTAVHHECRWTNHIVGDNILGIT 281

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVT 114
             S EQY +++AN R   IGL+PL+   KY ++P+  +    D KK+     NFFE  VT
Sbjct: 282 ESSTEQYTKYLANIRLKAIGLKPLYADEKYQKSPYSHLERFSDTKKDAHTKANFFEATVT 341

Query: 115 EYQQGAELK-WD 125
            Y   + +  WD
Sbjct: 342 SYVMSSGVTGWD 353


>gi|126654703|ref|ZP_01726237.1| hypothetical protein CY0110_09717 [Cyanothece sp. CCY0110]
 gi|126623438|gb|EAZ94142.1| hypothetical protein CY0110_09717 [Cyanothece sp. CCY0110]
          Length = 352

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I + +   PH   + ++     M   A   E  + +  +    +G+ 
Sbjct: 224 RDELSHVRLYQKLIPEARKVFPHSVEQIYE-----MFDMAVNYECRWTNHIVGNNILGIT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVT 114
             S E+Y +++AN R   IGLEPL+   KY ++P+  +    D KKE     NFFE  VT
Sbjct: 279 ESSTEKYTKYLANIRLRSIGLEPLYPEPKYNKSPYTHLERFSDTKKEAHTKANFFEATVT 338

Query: 115 EYQQGAELK-WD 125
            Y   + +  WD
Sbjct: 339 SYVMSSGVTGWD 350


>gi|288554979|ref|YP_003426914.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           pseudofirmus OF4]
 gi|288546139|gb|ADC50022.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus
           pseudofirmus OF4]
          Length = 344

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH+    +V  ++  E+P L  +E +   +  L  A  LE+ + +  + +   G+ 
Sbjct: 216 RDEQLHVYLFTNVFKELLEEHPELNNREMESFVKQSLTTAVELELKWYNYIIGEQIEGVT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
           +     Y++FIAN+R  Q+G + +F ++  N F W+    D+   K +FFE +  +Y +
Sbjct: 276 SDEMGSYLKFIANKRAKQLGYDHIFPEHRTNVFKWIKAYEDVNAAKSDFFEQKSRQYAK 334


>gi|223983469|ref|ZP_03633655.1| hypothetical protein HOLDEFILI_00935 [Holdemania filiformis DSM
           12042]
 gi|223964641|gb|EEF68967.1| hypothetical protein HOLDEFILI_00935 [Holdemania filiformis DSM
           12042]
          Length = 348

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L+T E +Q  R ML +    EI +    +     GLN
Sbjct: 220 RDENTHLWLFRSMILELRKEEPQLFTPEREQLYREMLKQGVEEEIEWGCAILGDEIPGLN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N R   I LE L+   E       W+S+  +    K +FFE R + Y 
Sbjct: 280 KTMIRDYIRYLGNLRAKAIHLEILYPGEEEEPASMKWVSQYANANLIKTDFFEARSSAYA 339

Query: 118 QGAELKWD 125
           + + LK D
Sbjct: 340 KASALKDD 347


>gi|2465173|emb|CAA71741.1| ribonucleotide reductase (Class I) [Trypanosoma brucei brucei]
          Length = 337

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  +      ++  K  + +   ++  A  +E  +  + +P   +G+N
Sbjct: 210 RDEGLHTDFACLLYEK------YIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  ++NPF +M ++I L+ + NFFE +V EYQ+  
Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFM-DMISLQGKTNFFEKKVGEYQKAG 320


>gi|74025550|ref|XP_829341.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|70834727|gb|EAN80229.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|261335315|emb|CBH18309.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei gambiense DAL972]
          Length = 337

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  +      ++  K  + +   ++  A  +E  +  + +P   +G+N
Sbjct: 210 RDEGLHTDFACLLYEK------YIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  ++NPF +M ++I L+ + NFFE +V EYQ+  
Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFM-DMISLQGKTNFFEKKVGEYQKAG 320


>gi|74025554|ref|XP_829343.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|70834729|gb|EAN80231.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
          Length = 337

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  +      ++  K  + +   ++  A  +E  +  + +P   +G+N
Sbjct: 210 RDEGLHTDFACLLYEK------YIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  ++NPF +M ++I L+ + NFFE +V EYQ+  
Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFM-DMISLQGKTNFFEKKVGEYQKAG 320


>gi|261335316|emb|CBH18310.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei gambiense DAL972]
          Length = 337

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  +      ++  K  + +   ++  A  +E  +  + +P   +G+N
Sbjct: 210 RDEGLHTDFACLLYEK------YIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  ++NPF +M ++I L+ + NFFE +V EYQ+  
Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFM-DMISLQGKTNFFEKKVGEYQKAG 320


>gi|165969130|ref|YP_001651030.1| ribonucleotide reductase small subunit 2 [Orgyia leucostigma NPV]
 gi|164663626|gb|ABY65846.1| ribonucleotide reductase small subunit 2 [Orgyia leucostigma NPV]
          Length = 339

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 6/117 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH NF     N+   E   + + E       M  EA  +E  +    +P   +G+N
Sbjct: 215 RDEGLHTNFACLYYNEYIDERDKMSSAEILD----MFVEAVNIEKEFFTSALPCDLLGMN 270

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           + +  +Y++F+A+R   ++  +P    T NPF +M+  I L+ + NFFE RV EY++
Sbjct: 271 SRAMCEYIEFVADRLLTELQ-QPKHFNTPNPFNFMNN-ISLEGKTNFFERRVGEYKR 325


>gi|3914640|sp|O15910|RIR2_TRYBB RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase R2 subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2411479|gb|AAB70705.1| ribonucleotide reductase small subunit [Trypanosoma brucei]
 gi|261335314|emb|CBH18308.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei gambiense DAL972]
          Length = 337

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  +      ++  K  + +   ++  A  +E  +  + +P   +G+N
Sbjct: 210 RDEGLHTDFACLLYEK------YIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  ++NPF +M ++I L+ + NFFE +V EYQ+  
Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFM-DMISLQGKTNFFEKKVGEYQKAG 320


>gi|319790519|ref|YP_004152152.1| ribonucleotide reductase [Thermovibrio ammonificans HB-1]
 gi|317115021|gb|ADU97511.1| ribonucleotide reductase [Thermovibrio ammonificans HB-1]
          Length = 352

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 5/100 (5%)

Query: 31  QQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90
           + K   M   A   E  ++ + +    +G+N  S E Y  +IAN+R   +GLEP+F    
Sbjct: 251 KDKIYDMFRIAVDQEQRFSKKVIGNKILGMNEQSIEDYTFYIANKRLKALGLEPIFPDRG 310

Query: 91  NPFPWMSEVIDLKKE----KNFFETRVTEYQQGAELK-WD 125
           NP+  +  + D   E     NFFE  VT Y Q   ++ WD
Sbjct: 311 NPYEHLERIADTGGEANVKANFFEATVTSYNQANAVEGWD 350


>gi|172036555|ref|YP_001803056.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp.
           ATCC 51142]
 gi|171698009|gb|ACB50990.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp.
           ATCC 51142]
          Length = 352

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I + +   PH   + ++     M   A   E  + +  +    +G+ 
Sbjct: 224 RDELSHVRLYQKLIPEARKVFPHSVEQIYE-----MFDMAVNYECRWTNHIVGNNILGIT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVT 114
             S E+Y +++AN R   IGLEPL+   KY ++P+  +    D KKE     NFFE  VT
Sbjct: 279 ESSTEKYTKYLANIRLRSIGLEPLYPEPKYNKSPYTHLERFSDTKKEAHTKANFFEATVT 338

Query: 115 EYQQGAELK-WD 125
            Y   + +  WD
Sbjct: 339 SYVMSSGVTGWD 350


>gi|164659270|ref|XP_001730759.1| hypothetical protein MGL_1758 [Malassezia globosa CBS 7966]
 gi|159104657|gb|EDP43545.1| hypothetical protein MGL_1758 [Malassezia globosa CBS 7966]
          Length = 397

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 9/124 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +        ++ EA  +E  +  + +P   +G+N
Sbjct: 266 RDEGLHTDFACLLFS-------HLKKRAHPDTVNRIITEAVDIEQDFLTDALPVSLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G  P    + NPF +M E I L+ + NFFE RV +Y +   
Sbjct: 319 ARLMCQYIEFVADRLLVALG-NPKHYNSTNPFDFM-ENISLQGKSNFFERRVGDYAKAGV 376

Query: 122 LKWD 125
            + D
Sbjct: 377 ARAD 380


>gi|294782021|ref|ZP_06747353.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 1_1_41FAA]
 gi|294481832|gb|EFG29601.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 1_1_41FAA]
          Length = 344

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P  ++ E      +M   A   EI +    +    +G+ 
Sbjct: 216 RDELSHVVLFRSIVKEIKNDYPEFFSAE---TIYSMFKTAVEQEINWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
           + + E Y +++AN R   +GLEPL+  + +NP+  +    D + E     NFFE  VT Y
Sbjct: 273 SQTTEVYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332

Query: 117 QQGAEL 122
              + +
Sbjct: 333 NMSSSI 338


>gi|16124515|ref|NP_419079.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter
           crescentus CB15]
 gi|221233200|ref|YP_002515636.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter
           crescentus NA1000]
 gi|13421393|gb|AAK22247.1| ribonucleoside-diphosphate reductase, beta subunit [Caulobacter
           crescentus CB15]
 gi|220962372|gb|ACL93728.1| ribonucleoside-diphosphate reductase beta chain [Caulobacter
           crescentus NA1000]
          Length = 347

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH +  I + +    E   + TK               +E  +       G + G
Sbjct: 198 IRDESLHCDGIIKLYHAFNKETGAV-TKAVADDIVDCCKTVVGMEDNFIDLAFEAGDIQG 256

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     + Y++F+A+ R  Q+ L  ++   ENP PW+  ++   +  NFFE R TEY + 
Sbjct: 257 MTPDDIKAYIRFVADWRLRQLHLPEVYGVKENPLPWLQSLLSGVEHANFFEARATEYSKA 316

Query: 120 A 120
           A
Sbjct: 317 A 317


>gi|19074323|ref|NP_585829.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon
           cuniculi GB-M1]
 gi|51701822|sp|Q8SRR2|RIR2_ENCCU RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|19068965|emb|CAD25433.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon
           cuniculi GB-M1]
          Length = 325

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F   +         H   K+   + + ++ +A  +E  +  E++P   +G+N
Sbjct: 202 RDEGLHCEFACLL---------HYHLKKKCNRIKEVVMDAVEIEKKFLSESLPVNLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                +Y++F+A+R    +G E ++  T NPF +M E I L  + NFF+ R ++YQ+ 
Sbjct: 253 CNLMCRYIEFVADRLLENLGEERVYNAT-NPFDFM-ENISLVGKTNFFDKRESQYQKA 308


>gi|71024571|ref|XP_762515.1| hypothetical protein UM06368.1 [Ustilago maydis 521]
 gi|46101992|gb|EAK87225.1| hypothetical protein UM06368.1 [Ustilago maydis 521]
          Length = 424

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 9/124 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +        ++ EA  +E A+  E++P   +G+N
Sbjct: 289 RDEGLHTDFACLLFS-------HLRRRAHPDTVLKIITEAVEIEKAFLCESIPVALIGMN 341

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++++A+R    +G  P+   +  PF +M+  I L+ + NFFE +V EY +   
Sbjct: 342 SKLMCQYIEYVADRLLVSLG-NPVHYGSTCPFDFMTN-ISLEGKTNFFEKKVAEYAKAGV 399

Query: 122 LKWD 125
            + D
Sbjct: 400 ARKD 403


>gi|323487827|ref|ZP_08093085.1| ribonucleotide-diphosphate reductase subunit beta [Planococcus
           donghaensis MPA1U2]
 gi|323398561|gb|EGA91349.1| ribonucleotide-diphosphate reductase subunit beta [Planococcus
           donghaensis MPA1U2]
          Length = 348

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 4/123 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F    I  +  ENP L T E  Q   T + +A  LE  +A   +     GL+
Sbjct: 220 RDEMQHAYFIAQFIRIMLTENPELHTDENIQYIYTTIDKAVQLEKEWAQYILA-DIEGLD 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL---KKEKNFFETRVTEYQQ 118
                +Y++++AN+R  Q+GL+ L++   NP PW+    D      + +FFE +   Y +
Sbjct: 279 LVEFGEYVEYLANKRLRQLGLDNLYEERSNPMPWIQVFGDDMMNDTKSDFFEQKSRTYTK 338

Query: 119 GAE 121
            ++
Sbjct: 339 VSQ 341


>gi|166367085|ref|YP_001659358.1| ribonucleoside-diphosphate reductase beta chain [Microcystis
           aeruginosa NIES-843]
 gi|166089458|dbj|BAG04166.1| ribonucleoside-diphosphate reductase beta chain [Microcystis
           aeruginosa NIES-843]
          Length = 283

 Score = 55.1 bits (131), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 18/130 (13%)

Query: 14  VINQIKIENPHLWTKEFQQKSRTMLHEAT----LLEIAYAHET------MPKGFVGLNAP 63
           +IN+ ++ +  L+ K   +   T  H       + + A  HE       +    +G+   
Sbjct: 152 MINRDELSHVRLYQKLIPEAMATFSHSVEQIYEMFDTAVKHECRWTNHIVGNDILGITEY 211

Query: 64  SCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
           S EQY +++AN R   IGLEPL+   KY ++P+  +    D KKE     NFFE  VT Y
Sbjct: 212 STEQYTKYLANIRLKAIGLEPLYREEKYNKSPYNHLERFSDTKKEGHTKANFFEATVTSY 271

Query: 117 QQGAELK-WD 125
              + L  WD
Sbjct: 272 VMSSGLTGWD 281


>gi|78486104|ref|YP_392029.1| ribonucleotide-diphosphate reductase subunit beta [Thiomicrospira
           crunogena XCL-2]
 gi|78364390|gb|ABB42355.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Thiomicrospira crunogena XCL-2]
          Length = 377

 Score = 55.1 bits (131), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL+    +IN +    ++P +    KE ++K   +  EA   E  +A      G 
Sbjct: 238 RDEALHLSGTQHLINILSEGKDDPEMMEIAKENEEKVYEIFREAAEQEKEWADYLFKDGS 297

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLNA   + Y+++I N R   I L P+F+   NP PWM+
Sbjct: 298 MIGLNASILKDYVEYITNTRIKAIKLNPIFENKSNPLPWMN 338


>gi|156564205|ref|YP_001429715.1| nrd beta subunit [Bacillus phage 0305phi8-36]
 gi|154622902|gb|ABS83782.1| nrd beta subunit [Bacillus phage 0305phi8-36]
          Length = 352

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 1/95 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F   +I ++  ENP L T+E  Q     L EA   E  +A E +     GL+
Sbjct: 224 RDEMQHAYFIGLLIRRLLTENPELNTQENAQYIVDSLKEAVATEKEWAGEILAD-IEGLD 282

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
               + Y++++AN+R  Q+G++ +++   NP PW+
Sbjct: 283 LEEFDHYIEYLANKRVRQLGMDNIYEERGNPMPWI 317


>gi|212693366|ref|ZP_03301494.1| hypothetical protein BACDOR_02879 [Bacteroides dorei DSM 17855]
 gi|237710423|ref|ZP_04540904.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           9_1_42FAA]
 gi|237726931|ref|ZP_04557412.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           D4]
 gi|212664010|gb|EEB24584.1| hypothetical protein BACDOR_02879 [Bacteroides dorei DSM 17855]
 gi|229433787|gb|EEO43864.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           dorei 5_1_36/D4]
 gi|229455145|gb|EEO60866.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           9_1_42FAA]
          Length = 349

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 8/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T +  +    M+ E    EI +    +     GLN
Sbjct: 221 RDENTHLWLFRNIILELKKEEPDLFTPDKVKIYEYMMREGVKQEIEWGQYVIGDNIQGLN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKKEK-NFFETRVTE 115
               E Y+Q++ N R   +G  PL  Y EN        W+S+  +    K +FFE + T 
Sbjct: 281 RKMIEDYIQYLGNLRWSSLGFGPL--YEENHKEPESMHWVSQYSNANMVKTDFFEAKSTA 338

Query: 116 YQQGAELKWD 125
           Y +   L+ D
Sbjct: 339 YAKSTALEDD 348


>gi|150005609|ref|YP_001300353.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           vulgatus ATCC 8482]
 gi|254884474|ref|ZP_05257184.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           4_3_47FAA]
 gi|294778581|ref|ZP_06744003.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides
           vulgatus PC510]
 gi|319640834|ref|ZP_07995547.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
           3_1_40A]
 gi|149934033|gb|ABR40731.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides
           vulgatus ATCC 8482]
 gi|254837267|gb|EET17576.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           4_3_47FAA]
 gi|294447530|gb|EFG16108.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides
           vulgatus PC510]
 gi|317387646|gb|EFV68512.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
           3_1_40A]
          Length = 349

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 8/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T +  +    M+ E    EI +    +     GLN
Sbjct: 221 RDENTHLWLFRNIILELKKEEPDLFTPDKVKIYEYMMREGVKQEIEWGQYVIGDNIQGLN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKKEK-NFFETRVTE 115
               E Y+Q++ N R   +G  PL  Y EN        W+S+  +    K +FFE + T 
Sbjct: 281 RKMIEDYIQYLGNLRWSSLGFGPL--YEENHKEPESMHWVSQYSNANMVKTDFFEAKSTA 338

Query: 116 YQQGAELKWD 125
           Y +   L+ D
Sbjct: 339 YAKSTALEDD 348


>gi|255954081|ref|XP_002567793.1| Pc21g07530 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211589504|emb|CAP95650.1| Pc21g07530 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 400

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       H+  +   +    ++ EA  +E  +  + +P   +G+N
Sbjct: 264 RDEGLHTDFACLLFS-------HMNHRPDPKVVEEIIVEAVGIEQEFLTDALPCALLGMN 316

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  + NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 317 SKLMCQYIEFVADRLLVALGNKKYYN-SANPFDFM-ESISLAGKTNFFEKRVGDYQKAG 373


>gi|299144102|ref|ZP_07037182.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
           sp. oral taxon 386 str. F0131]
 gi|298518587|gb|EFI42326.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
           sp. oral taxon 386 str. F0131]
          Length = 346

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E   L+T+E   + + ML E    EI +    +     G+ 
Sbjct: 218 RDENTHLWLFRNIIQELKKEEVELFTEERINEYKCMLMEGVRQEIEWGQYVIGDNIQGIT 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117
           A   + Y++++ N R   IG   LF       N   W+SE  +  + K +FFE +V+ Y 
Sbjct: 278 AQMVKDYIEYLGNLRSRSIGFGNLFDRNIEEPNSMKWVSEYSNPNEIKTDFFEGKVSAYS 337

Query: 118 QGAELKWD 125
           + +  + D
Sbjct: 338 KSSVFEDD 345


>gi|254523600|ref|ZP_05135655.1| ribonucleoside-diphosphate reductase, beta subunit
           [Stenotrophomonas sp. SKA14]
 gi|219721191|gb|EED39716.1| ribonucleoside-diphosphate reductase, beta subunit
           [Stenotrophomonas sp. SKA14]
          Length = 346

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  ENP L T E           A  LE  ++ E +  G  G++
Sbjct: 218 RDELAHTKFISELIRAIIGENPELQTNELTAYVHQAFEHAIELETQWSSEVL-DGIDGID 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L+   T+N  PW+    D   + + +FFE R   Y++
Sbjct: 277 VEEMTRYVKYRANKMAGMLGIERLYSDTTDNVMPWIKAYADNFTETKTDFFEMRNASYKK 336


>gi|229816571|ref|ZP_04446870.1| hypothetical protein COLINT_03629 [Collinsella intestinalis DSM
           13280]
 gi|229807906|gb|EEP43709.1| hypothetical protein COLINT_03629 [Collinsella intestinalis DSM
           13280]
          Length = 352

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L++ E     R ML E    EIA+    +     GL 
Sbjct: 224 RDENTHLWLFRSIILELQKEEPQLFSNENVTMLREMLEEGVRQEIAWGRYVLGDAIPGLT 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y++++ N R   +G   L++ Y   P    W+S+  +    K +FFE + T Y 
Sbjct: 284 GDMVEGYIKYLGNLRWSSLGFGQLYEGYRTEPADMAWVSQYSNANMVKTDFFEAKSTAYA 343

Query: 118 QGAEL 122
           +   L
Sbjct: 344 KSTAL 348


>gi|228861726|ref|YP_002854746.1| Rr2 [Euproctis pseudoconspersa nucleopolyhedrovirus]
 gi|226425174|gb|ACO53586.1| Rr2 [Euproctis pseudoconspersa nucleopolyhedrovirus]
          Length = 339

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 6/117 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH NF     N+   E+  L +    ++   M  EA  +E  +    +P   +G+N
Sbjct: 215 RDEGLHTNFACLYYNEYIPEHDKLSS----ERILDMFIEAVEIEKEFFKTALPCSLLGMN 270

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
             S  +Y++F+A+R    +  +P      NPF +M+  I ++ + NFFE RV EY++
Sbjct: 271 TESMCRYIEFVADRLLVDLN-QPKHFMASNPFNFMTN-ISMEGKTNFFERRVGEYRR 325


>gi|333030473|ref|ZP_08458534.1| ribonucleotide reductase [Bacteroides coprosuis DSM 18011]
 gi|332741070|gb|EGJ71552.1| ribonucleotide reductase [Bacteroides coprosuis DSM 18011]
          Length = 347

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L+T E   + R M+ E    E+A+    + +   GL 
Sbjct: 219 RDENTHLWLFQSIILELRKEEPQLFTVEAIAEFRAMIKEGAEQEMAWGEYVIEEEIEGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++AN RC  +G E L+  Y + P    W+++  +    K +FFE + + Y 
Sbjct: 279 QEMVSDYIKYLANLRCENLGFEILYPGYEDEPASMSWVAQYSNANMIKTDFFEAKPSAYA 338

Query: 118 QGAEL 122
           +   +
Sbjct: 339 KSTSI 343


>gi|50288235|ref|XP_446546.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525854|emb|CAG59473.1| unnamed protein product [Candida glabrata]
          Length = 335

 Score = 54.7 bits (130), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RD   + +F   +         HL TK   +    ++ EA  +E A+   +MP   +G++
Sbjct: 202 RDRGFYADFACLLF-------AHLKTKPNPKIIEQIITEAVEIEKAHYRNSMPIEKLGMD 254

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++ +A++     G E  +  T NPFP+M E   + K  NFFE +V++YQ+ +
Sbjct: 255 LKEIDQYIESVADKLLVSFGNEKFYNAT-NPFPFMEEATSIGK-TNFFEKKVSDYQKAS 311


>gi|265756566|ref|ZP_06090772.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
           3_1_33FAA]
 gi|263233754|gb|EEZ19369.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
           3_1_33FAA]
          Length = 349

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 8/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T +  +    M+ E    EI +    +     GLN
Sbjct: 221 RDENTHLWLFRNIILELKKEEPDLFTPDKVKIYEYMMREGVKQEIEWGQYVIGDNIQGLN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKKEK-NFFETRVTE 115
               E Y+Q++ N R   +G  PL  Y EN        W+S+  +    K +FFE + T 
Sbjct: 281 WKMIEDYIQYLGNLRWSSLGFGPL--YEENHKEPESMHWVSQYSNANMVKTDFFEAKSTA 338

Query: 116 YQQGAELKWD 125
           Y +   L+ D
Sbjct: 339 YAKSTALEDD 348


>gi|294955280|ref|XP_002788462.1| ribonucleoside-diphosphate reductase small chain, putative
           [Perkinsus marinus ATCC 50983]
 gi|239903931|gb|EER20258.1| ribonucleoside-diphosphate reductase small chain, putative
           [Perkinsus marinus ATCC 50983]
          Length = 157

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 2/75 (2%)

Query: 39  HEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE 98
           + A  +E  +  + +P G +G+NA    +Y++F+A+R    +G   ++  + NPF WM+ 
Sbjct: 36  NSAVNVEREFITDALPVGLIGMNAELMGRYIEFVADRLLVALGYAKIYN-SANPFDWMT- 93

Query: 99  VIDLKKEKNFFETRV 113
           +I L+ + NFFE RV
Sbjct: 94  MISLQGKTNFFEKRV 108


>gi|167461830|ref|ZP_02326919.1| ribonucleoside-diphosphate reductase beta subunit [Paenibacillus
           larvae subsp. larvae BRL-230010]
 gi|322383591|ref|ZP_08057349.1| ribonucleotide-diphosphate reductase subunit beta-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
 gi|321152059|gb|EFX44995.1| ribonucleotide-diphosphate reductase subunit beta-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
          Length = 343

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 4/123 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ H  F  +V   +  + P L T E  Q     + +A  LE  +AH  + +   G++
Sbjct: 215 RDEAQHAYFFGEVFKLLLTDFPELNTSERIQYVYDTIDQAVKLEEKWAHYVLNQ-IDGID 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID--LKKEK-NFFETRVTEYQQ 118
                +Y++FIAN+R   +GL+P ++  +N  PW+    D  L + K +FFE +   Y +
Sbjct: 274 LDDFSRYIRFIANKRLKTMGLQPAYEGVDNCMPWIRPFSDEALNQTKTDFFEAKSRTYAK 333

Query: 119 GAE 121
            ++
Sbjct: 334 VSD 336


>gi|253574542|ref|ZP_04851883.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           sp. oral taxon 786 str. D14]
 gi|251846247|gb|EES74254.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           sp. oral taxon 786 str. D14]
          Length = 343

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 5/119 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ H  F  +V  Q+ I+ P L TKE    +   +  A  LE  +AH T+ K   G++
Sbjct: 214 RDENQHCYFFAEVFKQLLIDYPELNTKENIDYAYRTIDRAVELETNWAHYTL-KNVPGID 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LKKEK-NFFETRVTEY 116
                 Y+++IAN+R   +GLE  +   + N  PW+    D  L   K +FFE +   Y
Sbjct: 273 LNELSDYIKYIANKRLTLMGLEKAYAGVDINCMPWIKPFSDEALNATKTDFFEAKSRNY 331


>gi|218442220|ref|YP_002380549.1| ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 7424]
 gi|218174948|gb|ACK73681.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 7424]
          Length = 355

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I +     PH   + ++     M   A   E  + +  +    +G+ 
Sbjct: 227 RDELSHVRLYQRIIVEAMETFPHSVEQIYE-----MFDTAVQHECRWTNHIVGDNILGIT 281

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVT 114
             S EQY +++AN R + IGL+PL+   KY ++P+  +    D KK+     NFFE  VT
Sbjct: 282 ESSTEQYTKYLANHRLNTIGLKPLYEDEKYKKSPYSHLERFSDTKKDAHTKANFFEATVT 341

Query: 115 EYQQGAELK-WD 125
            Y   + +  WD
Sbjct: 342 SYVMSSGVTGWD 353


>gi|194366071|ref|YP_002028681.1| ribonucleotide-diphosphate reductase subunit beta [Stenotrophomonas
           maltophilia R551-3]
 gi|194348875|gb|ACF51998.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
           R551-3]
          Length = 346

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  ENP L T E           A  LE  ++ E +  G  G++
Sbjct: 218 RDELAHTKFISELIRAIIGENPELQTNELTAYVHQSFEHAIELETQWSSEVL-DGIDGID 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L+   T+N  PW+    D   + + +FFE R   Y++
Sbjct: 277 VDEMVRYVKYRANKMAGMLGIERLYSDTTDNVMPWIKAYADNFTETKTDFFEMRNASYKK 336


>gi|73979723|ref|XP_856346.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase M2 chain
           (Ribonucleotide reductase small chain) isoform 3 [Canis
           familiaris]
          Length = 381

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 22/117 (18%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 269 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIIINAVRIEQEFLTEALPVKLIGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+                 ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 322 CTLMKQYIEFVFR--------------VENPFDFM-ENISLEGKTNFFEKRVGEYQR 363


>gi|190574752|ref|YP_001972597.1| ribonucleotide-diphosphate reductase subunit beta [Stenotrophomonas
           maltophilia K279a]
 gi|190012674|emb|CAQ46302.1| putative ribonucleoside-diphosphate reductase beta chain
           [Stenotrophomonas maltophilia K279a]
          Length = 346

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  ENP L T E           A  LE  ++ E +  G  G++
Sbjct: 218 RDELAHTKFISELIRAIIGENPELQTNELTAYVHQSFEHAIELETQWSSEVL-DGIDGID 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L+   T+N  PW+    D   + + +FFE R   Y++
Sbjct: 277 VDEMVRYVKYRANKMAGMLGIERLYSDTTDNVMPWIKAYADNFTETKTDFFEMRNASYKK 336


>gi|255724924|ref|XP_002547391.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
           tropicalis MYA-3404]
 gi|240135282|gb|EER34836.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
           tropicalis MYA-3404]
          Length = 387

 Score = 53.9 bits (128), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE +H ++   + + ++ + +P +  K        ++ EA  +E  Y  + +P   +G+
Sbjct: 259 RDEGIHTDYACLLFSYLENKPDPSIIEK--------IITEAVSIEKKYFSDALPVSLLGM 310

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N     QY+++ A+R     G +  +  T NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 311 NCDLMCQYVEYCADRLLVAFGNDKYYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQRAG 368


>gi|326796346|ref|YP_004314166.1| ribonucleoside-diphosphate reductase [Marinomonas mediterranea
           MMB-1]
 gi|326547110|gb|ADZ92330.1| Ribonucleoside-diphosphate reductase [Marinomonas mediterranea
           MMB-1]
          Length = 377

 Score = 53.9 bits (128), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E +Q+   +  EA   E  +A      G 
Sbjct: 238 RDEALHLTGTQHMLNLMTSGKDDPEMAIIAQECRQEITDIFIEAAQQEKEWAKYLFKDGS 297

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLNA    QY+++I+N R   +GLEP F+   NP PW++
Sbjct: 298 MIGLNAEILGQYVEYISNVRMQAVGLEPAFETKSNPIPWIN 338


>gi|148244629|ref|YP_001219323.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Vesicomyosocius okutanii HA]
 gi|146326456|dbj|BAF61599.1| ribonucleoside-diphosphate reductase beta subunit [Candidatus
           Vesicomyosocius okutanii HA]
          Length = 378

 Score = 53.9 bits (128), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 5/105 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    KE +++  TM  EA   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLMSDGKDDPDMKKIAKECEKEVITMFKEACEQEKDWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101
            +GLNA   +QY+++I N R   + L P+F    NP PW++  +D
Sbjct: 297 MIGLNAKMLKQYLEYITNVRMKALNLSPVFDECINPLPWINHWLD 341


>gi|237678830|emb|CAQ57557.1| NrdB protein [Bradyrhizobium elkanii]
          Length = 360

 Score = 53.9 bits (128), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 32/147 (21%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58
           +RDESLH   GI       I+  H W +E    +R++  +  ++++A     + + FV  
Sbjct: 212 VRDESLHCE-GI-------IKLFHEWNRETGAVTRSVRDD--IVDVAKTMVKLEENFVDL 261

Query: 59  --------GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----------NPFPWMSEV 99
                   G+       Y++++A+ R  Q+ + P+F + E           +P PW+ E+
Sbjct: 262 AFGLGKIEGMRPEQIHTYVRYVADWRLTQLRIAPVFGFFEAKEGGFTQLKAHPLPWLVEI 321

Query: 100 IDLKKEKNFFETRVTEYQQGAEL-KWD 125
           ++  +  NFFE R TEY + A    WD
Sbjct: 322 LNGVEHANFFEQRATEYSKAASRGSWD 348


>gi|74025548|ref|XP_829340.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|70834726|gb|EAN80228.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
          Length = 337

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 63/119 (52%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  +      ++  K  + +   ++  A  +E  +  + +P   +G+N
Sbjct: 210 RDEGLHTDFACLLYEK------YIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +     ++NPF +M ++I L+ + NFFE +V EYQ+  
Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHCN-SKNPFDFM-DMISLQGKTNFFEKKVGEYQKAG 320


>gi|269468252|gb|EEZ79942.1| ribonucleotide-diphosphate reductase subunit beta [uncultured SUP05
           cluster bacterium]
          Length = 319

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    KE + +   M  EA   E  +A      G 
Sbjct: 177 RDEALHLTGTQHMLNLMRDGKDDPDMEKIAKECENEVIQMFKEACEQEKDWAEYLFRDGS 236

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101
            +GLNA   +QY+++I N R + +GL+P+F ++  NP PW++  +D
Sbjct: 237 MIGLNADILKQYLEYITNVRMNALGLKPIFDEHVTNPLPWINSWLD 282


>gi|281204152|gb|EFA78348.1| ribonucleotide reductase-related protein [Polysphondylium pallidum
           PN500]
          Length = 323

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F   + ++       L  K   +   +++ +A   E  +  +++P   +G+N
Sbjct: 199 RDEGLHCQFACLLYSK-------LVNKLDAKTIESIIRDAVDCEKEFITQSLPVDLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                +Y++F+A+     +G + ++  T NPF WM E+I +    NFFE R T Y
Sbjct: 252 NRLMSEYIEFVADHLIVALGYKKIYN-TANPFDWM-ELISIDTRTNFFEHRNTSY 304


>gi|297265423|ref|XP_001091447.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Macaca
           mulatta]
          Length = 704

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 2/61 (3%)

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
           +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ
Sbjct: 628 IGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQ 685

Query: 118 Q 118
           +
Sbjct: 686 R 686


>gi|315304277|ref|ZP_07874626.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           ivanovii FSL F6-596]
 gi|313627356|gb|EFR96140.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           ivanovii FSL F6-596]
          Length = 349

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T E  + +      A  LE  ++ E M +G  G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTDELVEYTHEAFRHAVELETEWSEEVM-QGIEGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                 Y+++ AN+    +G+  L+  ++EN   W+    D   + + +FFE R + Y++
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSENTMTWIKAYADNFTETKTDFFEMRNSSYKK 339


>gi|229495919|ref|ZP_04389645.1| ribonucleoside-diphosphate reductase, beta subunit [Porphyromonas
           endodontalis ATCC 35406]
 gi|229317232|gb|EEN83139.1| ribonucleoside-diphosphate reductase, beta subunit [Porphyromonas
           endodontalis ATCC 35406]
          Length = 346

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L+T E + +   M+ E  L EIA+    +     GL 
Sbjct: 218 RDENTHLWLFRSMILELRREQPELFTPEREAEFLEMIREGALQEIAWGKYVIGDEIEGLT 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
           +     Y+ ++AN R   +GL  +F  + E P    W+S+  +    K +FFE + + Y 
Sbjct: 278 SQMVSDYIMYLANLRSANLGLGVIFPGHEEEPASMSWVSQYSNSNLIKTDFFEAKPSAYA 337

Query: 118 QGAELKWD 125
           + A ++ D
Sbjct: 338 KSASIEDD 345


>gi|53713986|ref|YP_099978.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis YCH46]
 gi|52216851|dbj|BAD49444.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides
           fragilis YCH46]
          Length = 349

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T +  +    M+ E    EIA+    +     GLN
Sbjct: 221 RDENTHLWLFRNIILELKKEEPELFTPDKVKVYEEMMREGVKQEIAWGQYVIGDQIQGLN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y+ F+ N R   +G  PL++          W+S+  +    K +FFE + T Y 
Sbjct: 281 RQMISDYIHFLGNLRWSSLGYTPLYEDNRKEPESMHWVSQYSNANMVKTDFFEAKSTAYA 340

Query: 118 QGAELKWD 125
           +   L+ D
Sbjct: 341 KSTALEDD 348


>gi|253567022|ref|ZP_04844473.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
           3_2_5]
 gi|265764336|ref|ZP_06092904.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
           2_1_16]
 gi|15290503|gb|AAK92210.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides
           fragilis 638R]
 gi|251944146|gb|EES84655.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
           3_2_5]
 gi|263256944|gb|EEZ28290.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
           2_1_16]
 gi|301163665|emb|CBW23219.1| putative ribonucleoside-diphosphate reductase beta chain
           [Bacteroides fragilis 638R]
          Length = 349

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T +  +    M+ E    EIA+    +     GLN
Sbjct: 221 RDENTHLWLFRNIILELKKEEPELFTPDKVKVYEEMMREGVKQEIAWGQYVIGDQIQGLN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y+ F+ N R   +G  PL++          W+S+  +    K +FFE + T Y 
Sbjct: 281 RQMISDYIHFLGNLRWSSLGYTPLYEDNRKEPESMHWVSQYSNANMVKTDFFEAKSTAYA 340

Query: 118 QGAELKWD 125
           +   L+ D
Sbjct: 341 KSTALEDD 348


>gi|323343338|ref|ZP_08083565.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella
           oralis ATCC 33269]
 gi|323095157|gb|EFZ37731.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella
           oralis ATCC 33269]
          Length = 349

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 8/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ ++K E P ++T E  +    M+ E    EIA+    +     GLN
Sbjct: 221 RDENTHLWLFRNILQELKKEEPKMFTPEKVKVYEEMMREGVRQEIAWGQYVIGDEVPGLN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKKEK-NFFETRVTE 115
                 Y+ ++ N R H +G   L  Y EN        W+S+  +    K +FFE + T 
Sbjct: 281 TKMVSDYIHYLGNLRWHSLGFGYL--YDENIQEPENMKWVSQYSNANMVKTDFFEAKSTA 338

Query: 116 YQQGAELKWD 125
           Y +   L+ D
Sbjct: 339 YAKSTALEDD 348


>gi|60682187|ref|YP_212331.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis NCTC 9343]
 gi|60493621|emb|CAH08410.1| putative ribonucleoside-diphosphate reductase beta chain
           [Bacteroides fragilis NCTC 9343]
          Length = 349

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T +  +    M+ E    EIA+    +     GLN
Sbjct: 221 RDENTHLWLFRNIILELKKEEPELFTPDKVKVYEEMMREGVKQEIAWGQYVIGDQIQGLN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y+ F+ N R   +G  PL++          W+S+  +    K +FFE + T Y 
Sbjct: 281 RQMISDYIHFLGNLRWSSLGYTPLYEDNRKEPESMHWVSQYSNANMVKTDFFEAKSTAYA 340

Query: 118 QGAELKWD 125
           +   L+ D
Sbjct: 341 KSTALEDD 348


>gi|255008714|ref|ZP_05280840.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis 3_1_12]
 gi|313146449|ref|ZP_07808642.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis 3_1_12]
 gi|313135216|gb|EFR52576.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis 3_1_12]
          Length = 349

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 8/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T +  +    M+ E    EI +    +     GLN
Sbjct: 221 RDENTHLWLFRNIILELKKEEPELFTSDRVKVYEAMMREGVKQEIEWGQYVIGDEIQGLN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKKEK-NFFETRVTE 115
               E Y+ ++ N R   +G  PL  Y +N        W+S+  +    K +FFE + T 
Sbjct: 281 KKMIEDYIHYLGNLRWTSLGFTPL--YEDNLKEPESMRWVSQYSNANMVKTDFFEAKSTA 338

Query: 116 YQQGAELKWD 125
           Y +   L+ D
Sbjct: 339 YAKSTALEDD 348


>gi|309775830|ref|ZP_07670824.1| ribonucleoside-diphosphate reductase, beta subunit
           [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916368|gb|EFP62114.1| ribonucleoside-diphosphate reductase, beta subunit
           [Erysipelotrichaceae bacterium 3_1_53]
          Length = 347

 Score = 52.8 bits (125), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E PHL+T+E  Q+ + ML      EI +    +     GL 
Sbjct: 219 RDENTHLWLFRSMILELQKEEPHLFTEELIQEYKDMLRHGVEEEIRWGEYVIGNNIEGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y+ ++ N R + +G   L++  E+      W+S   +    K +FFE R + Y 
Sbjct: 279 MEMVSDYIHYLGNLRSNSLGFGSLYEGFESEPKSMEWVSMYANANLIKTDFFEARSSAYA 338

Query: 118 QGAEL 122
           + + L
Sbjct: 339 KSSAL 343


>gi|303237757|ref|ZP_07324316.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           disiens FB035-09AN]
 gi|302482043|gb|EFL45079.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           disiens FB035-09AN]
          Length = 349

 Score = 52.8 bits (125), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T E       M+ E    EIA+    +     GL 
Sbjct: 221 RDENTHLWLFRNIIVELKQEQPELFTPERIAVYEEMMREGVRQEIAWGQYVIGDKVQGLT 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y+ ++ N R   +G   L+++ +N      W+++  +  K K +FFE + T Y 
Sbjct: 281 QQMVADYIHYLGNLRWRSLGFGNLYEHNQNEPDDMQWVAQYSNANKVKTDFFEAKSTAYA 340

Query: 118 QGAEL 122
           +   L
Sbjct: 341 KSTAL 345


>gi|329847182|ref|ZP_08262210.1| ribonucleotide reductase, small chain family protein [Asticcacaulis
           biprosthecum C19]
 gi|328842245|gb|EGF91814.1| ribonucleotide reductase, small chain family protein [Asticcacaulis
           biprosthecum C19]
          Length = 352

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 3/122 (2%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    I + +    E   L TK  Q            +E  +       G V G
Sbjct: 200 VRDESLHCEGIIKLYHAFAKETKAL-TKSVQDDIIDCCKTVVTMEDKFIDLAFEMGPVQG 258

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           +     + Y+++IA+ R  Q+ L  ++    ENP PW+  ++   +  NFFE R TEY +
Sbjct: 259 MTPDDIKAYIRYIADWRLRQLNLPEVYGGVKENPLPWLQVLLSGVEHANFFEARATEYSK 318

Query: 119 GA 120
            A
Sbjct: 319 AA 320


>gi|258648774|ref|ZP_05736243.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           tannerae ATCC 51259]
 gi|260851104|gb|EEX70973.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           tannerae ATCC 51259]
          Length = 350

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     ++ ++K E P ++T +     R M+ +    EI +    +     GL 
Sbjct: 222 RDENTHLWLFRSILLELKKEAPEMFTPDKVDVYRQMIAQGVEEEIKWGEYVLGDKIEGLT 281

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
           +     Y++++ N R   +G +PL+  Y + P    W+S+  +    K +FFE R T Y 
Sbjct: 282 SEMIRDYIKYLGNLRTTSLGFDPLYDGYDKEPPSMSWVSQYSNANMIKTDFFEARSTAYA 341

Query: 118 QGAEL 122
           + + L
Sbjct: 342 KSSAL 346


>gi|299822182|ref|ZP_07054068.1| ribonucleotide-diphosphate reductase subunit beta [Listeria grayi
           DSM 20601]
 gi|299815711|gb|EFI82949.1| ribonucleotide-diphosphate reductase subunit beta [Listeria grayi
           DSM 20601]
          Length = 349

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T E    +      A  LE  ++ E M +G  G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTDELVAYTHDAFRHAVELETIWSEEVM-EGIEGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                 Y+++ AN+    +G+  L+  ++EN   W+    D   + + +FFE R + Y++
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSENTMTWIKAYADNFTETKTDFFEMRNSSYKK 339


>gi|308049658|ref|YP_003913224.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Ferrimonas balearica DSM 9799]
 gi|307631848|gb|ADN76150.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Ferrimonas balearica DSM 9799]
          Length = 378

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE LHL     +IN +    ++P +     E   +S  +   A   E A+A      G 
Sbjct: 239 RDEQLHLVGTQHMINLMADGRDDPEMAEIAIECHSESIEIFRRAAEQEKAWASYLFKDGS 298

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN    E Y++FI N R   IGL PLF    NP PWMS
Sbjct: 299 MLGLNKQIIEDYVEFITNERMAGIGLPPLFDKRSNPLPWMS 339


>gi|209523562|ref|ZP_03272116.1| ribonucleoside-diphosphate reductase beta chain [Arthrospira maxima
           CS-328]
 gi|209495967|gb|EDZ96268.1| ribonucleoside-diphosphate reductase beta chain [Arthrospira maxima
           CS-328]
          Length = 112

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 8/103 (7%)

Query: 31  QQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---K 87
           Q +   M   A   E  + +  +    +G+   S EQY +++AN R   IGLE L+   K
Sbjct: 8   QDRIYEMFDAAVQHECRWTNHIVGNNILGITEHSTEQYTKYLANIRLRSIGLESLYSDPK 67

Query: 88  YTENPFPWMSEVIDLKKE----KNFFETRVTEYQQGAELK-WD 125
           Y ++P+  +    D KKE     NFFE  VT Y   + +  WD
Sbjct: 68  YQKSPYTHLERFSDTKKEAHTKANFFEASVTSYVMSSGVSGWD 110


>gi|71276518|ref|ZP_00652793.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Dixon]
 gi|71900741|ref|ZP_00682863.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1]
 gi|170729741|ref|YP_001775174.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
           fastidiosa M12]
 gi|71162695|gb|EAO12422.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Dixon]
 gi|71729511|gb|EAO31620.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1]
 gi|167964534|gb|ACA11544.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa M12]
          Length = 349

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T             A  LE  +  E +  G  G++
Sbjct: 221 RDELAHTKFISEVIRAIVGENPELQTDALTDYVHQAFAHAIELETQWTGEVL-NGIDGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L+ + T+N  PW+    D   + + +FFE R   Y++
Sbjct: 280 VEEMIRYVKYRANKMAGMLGIETLYTETTDNVMPWIRAYADNFTETKTDFFEMRNASYKK 339


>gi|319936387|ref|ZP_08010803.1| ribonucleotide-diphosphate reductase subunit beta [Coprobacillus
           sp. 29_1]
 gi|319808502|gb|EFW05054.1| ribonucleotide-diphosphate reductase subunit beta [Coprobacillus
           sp. 29_1]
          Length = 346

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 8/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ E P L+T +  +  R M+      EIA+    +     GL 
Sbjct: 218 RDENTHLWLFRNMILELQKEEPDLFTPDKIEVYRDMMKRGVEEEIAWGQYVLGDRIEGLT 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWM---SEVIDLKKEKNFFETRVTE 115
                 Y+ ++ N R   +  EPLF+ Y + P    W+   S   D+K +  FFE R + 
Sbjct: 278 MKMVSDYIHYLGNFRAQALNFEPLFEDYMQEPESMKWVSIYSNANDIKTD--FFEARSSA 335

Query: 116 YQQGAELKWD 125
           Y + + L+ D
Sbjct: 336 YAKSSALEDD 345


>gi|170077010|ref|YP_001733648.1| ribonucleoside-diphosphate reductase, beta subunit [Synechococcus
           sp. PCC 7002]
 gi|169884679|gb|ACA98392.1| ribonucleoside-diphosphate reductase, beta subunit [Synechococcus
           sp. PCC 7002]
          Length = 352

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 8/97 (8%)

Query: 37  MLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPF 93
           M+  A   E  + +  +    +G+   S E Y +++AN R   IGLEPL+K   Y ++P+
Sbjct: 254 MVERAVQYECQWTNHIVGNDILGITEQSTEIYTKYLANIRLQAIGLEPLYKGDQYKKSPY 313

Query: 94  PWMSEVIDLKKE----KNFFETRVTEYQQGAELK-WD 125
             +    D KKE     NFFE  VT Y   + +  WD
Sbjct: 314 RHLERFSDTKKEGNTKANFFEAGVTSYVMSSGITGWD 350


>gi|291570484|dbj|BAI92756.1| ribonucleoside-diphosphate reductase beta chain [Arthrospira
           platensis NIES-39]
          Length = 123

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 8/103 (7%)

Query: 31  QQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---K 87
           Q +   M   A   E  + +  +    +G+   S EQY +++AN R   IGLE L+   K
Sbjct: 19  QDRIYEMFDAAVQHECRWTNHIVGNNILGITEHSTEQYTKYLANIRLRSIGLESLYSDPK 78

Query: 88  YTENPFPWMSEVIDLKKE----KNFFETRVTEYQQGAELK-WD 125
           Y ++P+  +    D KKE     NFFE  VT Y   + +  WD
Sbjct: 79  YQKSPYTHLERFSDTKKEAHTKANFFEASVTSYVMSSGVSGWD 121


>gi|239628850|ref|ZP_04671881.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239518996|gb|EEQ58862.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 347

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I ++K E P L+T +  +    ML E    EI +    +     GL 
Sbjct: 219 RDENTHLWLFRSMIGELKKEEPGLFTPDNVKMLEDMLREGVSQEIEWGCYVIGDEVPGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N R   +G EPL++ Y + P    W+++  +    K +FFE + T Y 
Sbjct: 279 KDMVSSYIKYLGNLRWTGLGFEPLYEGYGKEPESMAWVNQYSNANMVKTDFFEAKSTAYA 338

Query: 118 QGAEL 122
           + A +
Sbjct: 339 KSAAI 343


>gi|118197598|ref|YP_874310.1| ribonucleotide reductase small subunit [Ecotropis obliqua NPV]
 gi|113472593|gb|ABI35800.1| ribonucleotide reductase small subunit [Ecotropis obliqua NPV]
          Length = 341

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 6/117 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F     N     N  L      Q+  +M  EA  +E  +    +P   +G+N
Sbjct: 217 RDEGLHTDFACMYYNNYIPINEKL----SPQQILSMFIEAVDIEKEFFTTALPCYLLGIN 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           A    +Y++F+A+R   ++  +P    T NPF +M+  I L+ + NFFE RV EY++
Sbjct: 273 ATEMCKYIEFVADRLLVELR-QPKHFNTPNPFNFMTN-ISLEGKTNFFERRVGEYKR 327


>gi|47213103|emb|CAF89523.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 407

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 22/117 (18%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K   Q    ++  A  +E  +  E +P   +G+N
Sbjct: 295 RDEGLHCDFACLMFK-------HLLHKPSAQTVGAIIRNAVEIEQEFLTEALPVKLIGMN 347

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               ++Y++FI                 ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 348 CQLMKRYIEFIYR--------------AENPFDFM-ENISLEGKTNFFEKRVGEYQR 389


>gi|239993885|ref|ZP_04714409.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas
           macleodii ATCC 27126]
          Length = 376

 Score = 52.0 bits (123), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 21/113 (18%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTK------------EFQQKSRTMLHEATLLEIAYA 49
           RDE+LHL+    ++N        LW K            E ++++R +   A   E  +A
Sbjct: 237 RDENLHLSSTQHILN--------LWAKGKDDPEMAQIAEECKEEARAIFMNAVEQEKQWA 288

Query: 50  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101
                 G  +GLN     QY+++IAN+R   IGL+  F+ + NP PWM+  ++
Sbjct: 289 DYLFQNGSMIGLNKEILCQYVEYIANQRMSAIGLDTPFEISSNPLPWMNNYLN 341


>gi|225568010|ref|ZP_03777035.1| hypothetical protein CLOHYLEM_04083 [Clostridium hylemonae DSM
           15053]
 gi|225163184|gb|EEG75803.1| hypothetical protein CLOHYLEM_04083 [Clostridium hylemonae DSM
           15053]
          Length = 355

 Score = 52.0 bits (123), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     ++ ++K E P L+  E  +  R M+ E    EI + H  +     GL 
Sbjct: 227 RDENTHLWLFRSMLQELKKEEPQLFAAEDIKMYRQMIREGCEQEIRWGHYVIGDKIQGLT 286

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N RC  +G E +++ Y   P    W+ +  +    K +FFE + T Y 
Sbjct: 287 KDMITSYIRYLGNLRCTGLGFERIYEGYDTIPESMRWVEQYSNANLIKTDFFEAKSTAYA 346

Query: 118 QGAEL 122
           + + L
Sbjct: 347 KSSAL 351


>gi|87120532|ref|ZP_01076426.1| ribonucleotide-diphosphate reductase beta subunit [Marinomonas sp.
           MED121]
 gi|86164175|gb|EAQ65446.1| ribonucleotide-diphosphate reductase beta subunit [Marinomonas sp.
           MED121]
          Length = 377

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    KE + ++  +  EA   E  +A      G 
Sbjct: 238 RDEALHLTGTQHILNLMASGKDDPEMEDIAKECEDEAYQIFFEAAEQEKEWASYLFKDGS 297

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLNA    QY+++I N R   IGL P F+   NP PW++
Sbjct: 298 MIGLNAQILGQYVEYITNIRMQAIGLLPTFETKHNPIPWIN 338


>gi|332141553|ref|YP_004427291.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas
           macleodii str. 'Deep ecotype']
 gi|327551575|gb|AEA98293.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas
           macleodii str. 'Deep ecotype']
          Length = 376

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 21/113 (18%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTK------------EFQQKSRTMLHEATLLEIAYA 49
           RDE+LHL+    ++N        LW K            E ++++R +   A   E  +A
Sbjct: 237 RDENLHLSSTQHILN--------LWAKGKDDPEMAQIAQECKEEARAIFMNAVEQEKEWA 288

Query: 50  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101
                 G  +GLN     QY+++IAN+R   IGL+  F  + NP PWM+  ++
Sbjct: 289 DYLFKTGSMIGLNKEILCQYVEYIANQRMSAIGLDTPFDISSNPLPWMNNYLN 341


>gi|260912588|ref|ZP_05919119.1| ribonucleoside-diphosphate reductase [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260633300|gb|EEX51459.1| ribonucleoside-diphosphate reductase [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 348

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I+++K E P  +T E  +    M+ E    EIA+    +     GLN
Sbjct: 220 RDENTHLWLFRNIIHEMKKEEPEYFTPEKVKLYEEMMREGVRQEIAWGQYVIGDEVQGLN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N R   +G   LF+   E P    W+S+  +    K +FFE + T Y 
Sbjct: 280 GQMVNDYIRYLGNMRWRSLGFGNLFEDNIEEPENMRWVSQYANANMVKTDFFEAKSTAYA 339

Query: 118 QGAELKWD 125
           +   ++ D
Sbjct: 340 KSTAIEDD 347


>gi|285016983|ref|YP_003374694.1| ribonucleotide-diphosphate reductase beta subunit protein
           [Xanthomonas albilineans GPE PC73]
 gi|283472201|emb|CBA14708.1| probable ribonucleotide-diphosphate reductase beta subunit protein
           [Xanthomonas albilineans]
          Length = 346

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  EN  L T E           A  LE  ++ E +  G  G++
Sbjct: 218 RDELAHTKFISELIRAIIGENAELQTNELTDYVHQAFEHAIRLETEWSSEVL-DGIEGID 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                QY+++ AN+    +G+E L+   ++N  PW+    D   + + +FFE R   Y++
Sbjct: 277 VDEMIQYVKYRANKMSGMLGIEKLYTGASDNVMPWIKAYADNFTETKTDFFEMRNASYKK 336


>gi|153814165|ref|ZP_01966833.1| hypothetical protein RUMTOR_00374 [Ruminococcus torques ATCC 27756]
 gi|317499963|ref|ZP_07958199.1| ribonucleoside-diphosphate reductase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331087814|ref|ZP_08336739.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 3_1_46FAA]
 gi|145848561|gb|EDK25479.1| hypothetical protein RUMTOR_00374 [Ruminococcus torques ATCC 27756]
 gi|316898680|gb|EFV20715.1| ribonucleoside-diphosphate reductase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330409509|gb|EGG88950.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 3_1_46FAA]
          Length = 353

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ E+P L+      + + +L EA   EI +A   +     GLN
Sbjct: 225 RDENTHLWLFRNIIIELRKEHPELFDDHMVSEMKELLMEAVRQEIEWACYVIGNEVPGLN 284

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N R   +G  P++   E       W+S+  +    K +FFE R T Y 
Sbjct: 285 EKMITDYIRYLGNLRWKSLGYAPIYPGCEREPETMKWVSQYSNANMVKTDFFEARSTAYA 344

Query: 118 QGAEL 122
           +   L
Sbjct: 345 KSTAL 349


>gi|257462865|ref|ZP_05627271.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp.
           D12]
          Length = 348

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 9/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I +IK           +++ R M   A   EI +    +    +G+ 
Sbjct: 220 RDELSHVVLFQKIIREIK---AENHNFFEEEEIRAMFRTAVEQEILWTEHIIGNRILGIT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
             + E Y +++AN R   IGL P++ ++T+NP+  +    D + +     NFFE  VT Y
Sbjct: 277 TETTEAYTKWLANERLRTIGLAPMYEEFTKNPYKHLERFADTEGDGNVKSNFFEGTVTSY 336

Query: 117 QQGAELK-WD 125
              + +  WD
Sbjct: 337 NMSSSIDGWD 346


>gi|319902178|ref|YP_004161906.1| ribonucleotide reductase [Bacteroides helcogenes P 36-108]
 gi|319417209|gb|ADV44320.1| ribonucleotide reductase [Bacteroides helcogenes P 36-108]
          Length = 347

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+  +  +    M+ E    EIA+    +     GL+
Sbjct: 219 RDENTHLWLFRNIILELKKEEPELFVPDKVKVYEEMMREGVKQEIAWGQYVIGDNIQGLS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y+ ++ N R   +G  PL++  +       W+S+  +    K +FFE + T Y 
Sbjct: 279 RKMLEDYIHYLGNLRWKSLGYAPLYEDNQTEPESMHWVSQYSNANMVKTDFFEAKSTAYA 338

Query: 118 QGAELKWD 125
           +   L+ D
Sbjct: 339 KSTALEDD 346


>gi|317060491|ref|ZP_07924976.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. D12]
 gi|313686167|gb|EFS23002.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. D12]
          Length = 344

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 6/97 (6%)

Query: 35  RTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPF 93
           R M   A   EI +    +    +G+   + E Y +++AN R   IGL P++ ++T+NP+
Sbjct: 246 RAMFRTAVEQEILWTEHIIGNRILGITTETTEAYTKWLANERLRTIGLAPMYEEFTKNPY 305

Query: 94  PWMSEVIDLKKE----KNFFETRVTEYQQGAELK-WD 125
             +    D + +     NFFE  VT Y   + +  WD
Sbjct: 306 KHLERFADTEGDGNVKSNFFEGTVTSYNMSSSIDGWD 342


>gi|118602534|ref|YP_903749.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Ruthia magnifica str. Cm (Calyptogena magnifica)]
 gi|118567473|gb|ABL02278.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Candidatus Ruthia magnifica str. Cm (Calyptogena
           magnifica)]
          Length = 378

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 5/105 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +      L     +KE Q +  TM  EA   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMSSGKDDLDMQKISKECQDEVITMFREACEQEKDWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101
            +GLNA   +QY+++I N R   + L  +F    NP PW++  +D
Sbjct: 297 MIGLNAQILKQYLEYITNVRMKALNLSLIFDECTNPLPWINHWLD 341


>gi|317130866|ref|YP_004097148.1| ribonucleotide reductase [Bacillus cellulosilyticus DSM 2522]
 gi|315475814|gb|ADU32417.1| ribonucleotide reductase [Bacillus cellulosilyticus DSM 2522]
          Length = 345

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 62/122 (50%), Gaps = 2/122 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+    ++  ++  E P L +++  +  +    +   LEI +A   +     G++
Sbjct: 217 RDEQHHVYLFANIFKELMHEYPELNSEKTHRFVQETFKKGAELEINWAKYIIGDQMEGID 276

Query: 62  APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E Y++F+AN+R +++G+E P   Y  NP  W+    D+   K +FFE +  +Y + 
Sbjct: 277 IGDLEAYIKFMANKRVNELGVERPFEGYRNNPMRWIKIYEDVNSGKTDFFEQKSRQYTKV 336

Query: 120 AE 121
           ++
Sbjct: 337 SD 338


>gi|257454213|ref|ZP_05619483.1| ribonucleoside-diphosphate reductase, beta subunit [Enhydrobacter
           aerosaccus SK60]
 gi|257448386|gb|EEV23359.1| ribonucleoside-diphosphate reductase, beta subunit [Enhydrobacter
           aerosaccus SK60]
          Length = 377

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +IN  Q   ++P +    ++ QQ++  +  +A   E A+A      G 
Sbjct: 237 RDEALHLNGTQHMINLMQWGKDDPDMVEIAQDCQQQAIEIFKDAAEQEKAWAKYLFKNGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS 97
            +GLN     QY+++I N R   IGL P+F   + NP PW++
Sbjct: 297 MIGLNENILVQYVEYITNLRMDAIGLPPIFAAIKNNPIPWIN 338


>gi|15837799|ref|NP_298487.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
           fastidiosa 9a5c]
 gi|28198393|ref|NP_778707.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
           fastidiosa Temecula1]
 gi|9106169|gb|AAF84007.1|AE003954_4 ribonucleoside-diphosphate reductase beta chain [Xylella fastidiosa
           9a5c]
 gi|28056463|gb|AAO28356.1| ribonucleoside-diphosphate reductase beta chain [Xylella fastidiosa
           Temecula1]
          Length = 346

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T             A  LE  +  E +  G  G++
Sbjct: 218 RDELAHTKFISEVIRAIVGENPELQTDALTDYVHQAFAHAIELETQWTGEVL-DGIDGID 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G++ L+ + T+N  PW+    D   + + +FFE R   Y++
Sbjct: 277 VEEMIRYVKYRANKMAGMLGIQTLYTETTDNVMPWIRAYADNFTETKTDFFEMRNASYKK 336


>gi|46908387|ref|YP_014776.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|47091823|ref|ZP_00229618.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes str. 4b H7858]
 gi|226224761|ref|YP_002758868.1| ribonucleoside-diphosphate reductase, subunit beta [Listeria
           monocytogenes Clip81459]
 gi|254825283|ref|ZP_05230284.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL J1-194]
 gi|254853280|ref|ZP_05242628.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL R2-503]
 gi|254931734|ref|ZP_05265093.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes HPB2262]
 gi|255519998|ref|ZP_05387235.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL J1-175]
 gi|300764038|ref|ZP_07074034.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes FSL N1-017]
 gi|46881658|gb|AAT04953.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|47019834|gb|EAL10572.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes str. 4b H7858]
 gi|225877223|emb|CAS05937.1| Putative ribonucleoside-diphosphate reductase, subunit beta
           [Listeria monocytogenes serotype 4b str. CLIP 80459]
 gi|258606640|gb|EEW19248.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL R2-503]
 gi|293583289|gb|EFF95321.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes HPB2262]
 gi|293594529|gb|EFG02290.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL J1-194]
 gi|300515379|gb|EFK42430.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes FSL N1-017]
 gi|313617790|gb|EFR90013.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           innocua FSL S4-378]
 gi|328465961|gb|EGF37142.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 1816]
 gi|328472177|gb|EGF43048.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 220]
 gi|332312605|gb|EGJ25700.1| Ribonucleoside-diphosphate reductase [Listeria monocytogenes str.
           Scott A]
          Length = 349

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++ E + +G  G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHDAFRHAVELETEWSEEVL-QGIEGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                 Y+++ AN+    +G+  L+  +++N   W+    D   + + +FFE R + Y++
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339


>gi|71901120|ref|ZP_00683227.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1]
 gi|182681036|ref|YP_001829196.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
           fastidiosa M23]
 gi|71729125|gb|EAO31249.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1]
 gi|182631146|gb|ACB91922.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa M23]
 gi|307579504|gb|ADN63473.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
           fastidiosa subsp. fastidiosa GB514]
          Length = 349

 Score = 51.2 bits (121), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T             A  LE  +  E +  G  G++
Sbjct: 221 RDELAHTKFISEVIRAIVGENPELQTDALTDYVHQAFAHAIELETQWTGEVL-DGIDGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G++ L+ + T+N  PW+    D   + + +FFE R   Y++
Sbjct: 280 VEEMIRYVKYRANKMAGMLGIQTLYTETTDNVMPWIRAYADNFTETKTDFFEMRNASYKK 339


>gi|313622843|gb|EFR93161.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           innocua FSL J1-023]
          Length = 349

 Score = 51.2 bits (121), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++ E + +G  G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHDAFRHAVELETEWSEEVL-QGIEGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                 Y+++ AN+    +G+  L+  +++N   W+    D   + + +FFE R + Y++
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339


>gi|313607545|gb|EFR83848.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes FSL F2-208]
          Length = 187

 Score = 51.2 bits (121), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++ E + +G  G++
Sbjct: 59  RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWSEEVL-QGIEGID 117

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                 Y+++ AN+    +G+  L+  +++N   W+    D   + + +FFE R + Y++
Sbjct: 118 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 177


>gi|16801322|ref|NP_471590.1| ribonucleotide-diphosphate reductase subunit beta [Listeria innocua
           Clip11262]
 gi|16414770|emb|CAC97486.1| lin2258 [Listeria innocua Clip11262]
          Length = 349

 Score = 51.2 bits (121), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++ E + +G  G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHDAFRHAVELETEWSEEVL-QGIEGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                 Y+++ AN+    +G+  L+  +++N   W+    D   + + +FFE R + Y++
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339


>gi|160937686|ref|ZP_02085046.1| hypothetical protein CLOBOL_02576 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439331|gb|EDP17083.1| hypothetical protein CLOBOL_02576 [Clostridium bolteae ATCC
           BAA-613]
          Length = 347

 Score = 51.2 bits (121), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L+T +     R+ML E    EI +    +     GL 
Sbjct: 219 RDENTHLWLFRSMIAELRKEEPQLFTPKMVDMLRSMLEEGVAQEIQWGCYVIGDDVPGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N R   +G   L++ Y E P    W+++  +    K +FFE + T Y 
Sbjct: 279 REMVTDYIRYLGNLRWSGLGFGTLYEGYDEEPQSMKWVNQYSNANMVKTDFFEAKSTAYA 338

Query: 118 QGAEL 122
           + A +
Sbjct: 339 KSAAI 343


>gi|326565416|gb|EGE15593.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 103P14B1]
          Length = 376

 Score = 51.2 bits (121), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +IN ++   ++P +    +  Q+++  +   A   E A+A+     G 
Sbjct: 237 RDEALHLNGTQHMINLMRQGRDDPDMVAIAEACQEEAIEIFKSAAEQEKAWANYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY++FI N R   IGL  +F+   NP PW++
Sbjct: 297 MIGLNRDILCQYIEFITNTRMSAIGLPAIFETKTNPIPWIN 337


>gi|289435502|ref|YP_003465374.1| ribonucleoside-diphosphate reductase beta chain [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
 gi|289171746|emb|CBH28292.1| ribonucleoside-diphosphate reductase beta chain [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
 gi|313632343|gb|EFR99385.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           seeligeri FSL N1-067]
 gi|313636848|gb|EFS02469.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           seeligeri FSL S4-171]
          Length = 349

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++ E + +G  G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVDLETEWSEEVL-QGIEGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                 Y+++ AN+    +G+  L+  +++N   W+    D   + + +FFE R + Y++
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339


>gi|326560111|gb|EGE10501.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 46P47B1]
 gi|326564174|gb|EGE14410.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 12P80B1]
 gi|326573404|gb|EGE23372.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 101P30B1]
          Length = 376

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +IN ++   ++P +    +  Q+++  +   A   E A+A+     G 
Sbjct: 237 RDEALHLNGTQHMINLMRQGRDDPDMVAIAEACQEEAIEIFKSAAEQEKAWANYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY++FI N R   IGL  +F+   NP PW++
Sbjct: 297 MIGLNRDILCQYIEFITNTRMSAIGLPAIFETKTNPIPWIN 337


>gi|326560494|gb|EGE10876.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 7169]
 gi|326570427|gb|EGE20467.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis BC8]
 gi|326575699|gb|EGE25622.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis CO72]
 gi|326577166|gb|EGE27060.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis O35E]
          Length = 376

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +IN ++   ++P +    +  Q+++  +   A   E A+A+     G 
Sbjct: 237 RDEALHLNGTQHMINLMRQGRDDPDMVAIAEACQEEAIEIFKSAAEQEKAWANYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY++FI N R   IGL  +F+   NP PW++
Sbjct: 297 MIGLNRDILCQYIEFITNTRMSAIGLPAIFETKTNPIPWIN 337


>gi|255023762|ref|ZP_05295748.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL J1-208]
          Length = 284

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T E  + +      A  LE  ++ E + +G  G++
Sbjct: 156 RDELAHSKFISEVIRAILGENPELQTDELVEYTHDAFRHAVELETEWSEEVL-QGIEGID 214

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                 Y+++ AN+    +G+  L+  +++N   W+    D   + + +FFE R + Y++
Sbjct: 215 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 274


>gi|296113118|ref|YP_003627056.1| ribonucleoside-diphosphate reductase 1 subunit beta [Moraxella
           catarrhalis RH4]
 gi|295920812|gb|ADG61163.1| ribonucleoside-diphosphate reductase 1 subunit beta [Moraxella
           catarrhalis RH4]
          Length = 380

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +IN ++   ++P +    +  Q+++  +   A   E A+A+     G 
Sbjct: 241 RDEALHLNGTQHMINLMRQGRDDPDMVAIAEACQEEAIEIFKSAAEQEKAWANYLFKDGS 300

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY++FI N R   IGL  +F+   NP PW++
Sbjct: 301 MIGLNRDILCQYIEFITNTRMSAIGLPAIFETKTNPIPWIN 341


>gi|16804193|ref|NP_465678.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes EGD-e]
 gi|116873587|ref|YP_850368.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           welshimeri serovar 6b str. SLCC5334]
 gi|217963685|ref|YP_002349363.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes HCC23]
 gi|224500181|ref|ZP_03668530.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes Finland 1988]
 gi|224501047|ref|ZP_03669354.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL R2-561]
 gi|254826956|ref|ZP_05231643.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL N3-165]
 gi|254831409|ref|ZP_05236064.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 10403S]
 gi|255028522|ref|ZP_05300473.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes LO28]
 gi|284802601|ref|YP_003414466.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 08-5578]
 gi|284995743|ref|YP_003417511.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 08-5923]
 gi|290893101|ref|ZP_06556089.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL J2-071]
 gi|16411624|emb|CAD00232.1| lmo2154 [Listeria monocytogenes EGD-e]
 gi|116742465|emb|CAK21589.1| ribonucleoside-diphosphate reductase beta chain [Listeria
           welshimeri serovar 6b str. SLCC5334]
 gi|217332955|gb|ACK38749.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes HCC23]
 gi|258599337|gb|EEW12662.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL N3-165]
 gi|284058163|gb|ADB69104.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 08-5578]
 gi|284061210|gb|ADB72149.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 08-5923]
 gi|290557263|gb|EFD90789.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL J2-071]
 gi|307571740|emb|CAR84919.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes L99]
          Length = 349

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++ E + +G  G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWSEEVL-QGIEGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                 Y+++ AN+    +G+  L+  +++N   W+    D   + + +FFE R + Y++
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339


>gi|47095728|ref|ZP_00233334.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes str. 1/2a F6854]
 gi|254899145|ref|ZP_05259069.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes J0161]
 gi|254912714|ref|ZP_05262726.1| ribonucleoside-diphosphate reductase [Listeria monocytogenes J2818]
 gi|254937041|ref|ZP_05268738.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes F6900]
 gi|47015871|gb|EAL06798.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes str. 1/2a F6854]
 gi|258609644|gb|EEW22252.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes F6900]
 gi|293590709|gb|EFF99043.1| ribonucleoside-diphosphate reductase [Listeria monocytogenes J2818]
          Length = 349

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++ E + +G  G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWSEEVL-QGIEGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                 Y+++ AN+    +G+  L+  +++N   W+    D   + + +FFE R + Y++
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339


>gi|310639978|ref|YP_003944736.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           polymyxa SC2]
 gi|309244928|gb|ADO54495.1| Ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           polymyxa SC2]
          Length = 343

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 5/119 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ H  F  +V  Q+  + P L TKE       M++ A  LE  +AH T+ K   G++
Sbjct: 214 RDENQHCYFFAEVFKQLLADFPELNTKENMDYVYRMINRAVELETNWAHYTL-KEVRGID 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LKKEK-NFFETRVTEY 116
                 Y++++AN R   +G++  ++  + N  PW+    D  L   K +FFE +   Y
Sbjct: 273 LNELSDYIKYMANMRLRLLGMDKAYEGVDINSMPWIKPFSDEALNATKTDFFEAKSRNY 331


>gi|255018022|ref|ZP_05290148.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL F2-515]
          Length = 267

 Score = 50.8 bits (120), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++ E + +G  G++
Sbjct: 139 RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWSEEVL-QGIEGID 197

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                 Y+++ AN+    +G+  L+  +++N   W+    D   + + +FFE R + Y++
Sbjct: 198 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 257


>gi|109898789|ref|YP_662044.1| ribonucleotide-diphosphate reductase subunit beta
           [Pseudoalteromonas atlantica T6c]
 gi|109701070|gb|ABG40990.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Pseudoalteromonas atlantica T6c]
          Length = 376

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 21/113 (18%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTK------------EFQQKSRTMLHEATLLEIAYA 49
           RDE+LHL     ++N        LW K            E+++++  +  +A   E  +A
Sbjct: 237 RDENLHLTSTQHILN--------LWAKGKDDPEMAEIALEYKEEATNIFLDAVNQEKEWA 288

Query: 50  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101
                 G  +GLN     QY++FIAN R   IGL+  F    NP PWM+  ++
Sbjct: 289 EYLFQNGSMIGLNKDILCQYVEFIANHRMSAIGLDQPFDIKNNPLPWMNNYLN 341


>gi|332306884|ref|YP_004434735.1| Ribonucleoside-diphosphate reductase [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332174213|gb|AEE23467.1| Ribonucleoside-diphosphate reductase [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 376

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 21/113 (18%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTK------------EFQQKSRTMLHEATLLEIAYA 49
           RDE+LHL     ++N        LW K            E++Q++  +  +A   E  +A
Sbjct: 237 RDENLHLTSTQHILN--------LWAKGKDDPEMAEIAIEYKQQATDIFLDAVNQEKEWA 288

Query: 50  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101
                 G  +GLN     QY++FIAN R   IGL   F    NP PWM+  ++
Sbjct: 289 EYLFQNGSMIGLNKDILCQYVEFIANHRMSAIGLGQPFDIKNNPLPWMNNYLN 341


>gi|315283233|ref|ZP_07871471.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           marthii FSL S4-120]
 gi|313613124|gb|EFR87028.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           marthii FSL S4-120]
          Length = 349

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T E  + +      A  LE  ++ E + +G  G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTDELVEYTHEAFRHAVELETEWSEEVL-QGIEGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                 Y+++ AN+    +G+  L+  +++N   W+    D   + + +FFE R + Y++
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339


>gi|167756571|ref|ZP_02428698.1| hypothetical protein CLORAM_02108 [Clostridium ramosum DSM 1402]
 gi|237733862|ref|ZP_04564343.1| ribonucleotide-diphosphate reductase subunit beta [Mollicutes
           bacterium D7]
 gi|167702746|gb|EDS17325.1| hypothetical protein CLORAM_02108 [Clostridium ramosum DSM 1402]
 gi|229382943|gb|EEO33034.1| ribonucleotide-diphosphate reductase subunit beta [Coprobacillus
           sp. D7]
          Length = 346

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ E P L+T E  +  R ML      EIA+    +     GL 
Sbjct: 218 RDENTHLWLFRNMIIELQKEEPTLFTPEKIEVYRNMLKRGVEEEIAWGQYVLGNRIEGLT 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y+ ++ N R   +  EPL++  E       W+S   +    K +FFE + T Y 
Sbjct: 278 MDMVSDYIHYLGNLRAFSLNFEPLYEGFETEPEAMKWVSIYSNANNIKTDFFEAKSTAYA 337

Query: 118 QGAELKWD 125
           + + ++ D
Sbjct: 338 KSSAIEDD 345


>gi|260591988|ref|ZP_05857446.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           veroralis F0319]
 gi|260536272|gb|EEX18889.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           veroralis F0319]
          Length = 348

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 6/126 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I ++K E P ++T+E  +    M+ E    EIA+    +     GLN
Sbjct: 220 RDENTHLWLFRSIILELKKEEPDMFTEEKVKVYEDMMREGVRQEIAWGQYVIGNDVQGLN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF----KYTENPFPWMSEVIDLKKEK-NFFETRVTEY 116
           +     Y++++ N R   +G   L+    K  EN   W+ +  +    K +FFE R T Y
Sbjct: 280 SQMVSDYIRYLGNLRWSGLGFGFLYPDNQKEPEN-MKWVGQYSNANMVKTDFFEARSTAY 338

Query: 117 QQGAEL 122
            +   L
Sbjct: 339 AKSTAL 344


>gi|152997008|ref|YP_001341843.1| ribonucleotide-diphosphate reductase subunit beta [Marinomonas sp.
           MWYL1]
 gi|150837932|gb|ABR71908.1| Ribonucleoside-diphosphate reductase [Marinomonas sp. MWYL1]
          Length = 377

 Score = 50.4 bits (119), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +     E Q + R +  EA   E  +A      G 
Sbjct: 238 RDEALHLTGTQHMLNLMASGKDDPEMAVIAAECQDEVRQIFIEAAEQEKEWATYLFKDGS 297

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLNA    QY+++I N R   +GLE  F    NP PW++
Sbjct: 298 MIGLNAQILGQYVEYITNVRMQAVGLETCFATKHNPIPWIN 338


>gi|122921307|pdb|2O1Z|A Chain A, Plasmodium Vivax Ribonucleotide Reductase Subunit R2
           (Pv086155)
 gi|122921308|pdb|2O1Z|B Chain B, Plasmodium Vivax Ribonucleotide Reductase Subunit R2
           (Pv086155)
          Length = 311

 Score = 50.4 bits (119), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 53/95 (55%), Gaps = 8/95 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P       ++  + ++ EA  +E ++  E++P   +G+N
Sbjct: 223 RDEGLHTDFNCLIYSLLENKLP-------EEVVQNIVKEAVEVERSFICESLPCDLIGMN 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
           +    QY++F+A+R    +G   +F + +NPF WM
Sbjct: 276 SRLMSQYIEFVADRLLECLGSPKIF-HAKNPFNWM 309


>gi|146312444|ref|YP_001177518.1| ribonucleotide-diphosphate reductase subunit beta [Enterobacter sp.
           638]
 gi|145319320|gb|ABP61467.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Enterobacter sp. 638]
          Length = 376

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    +E +Q+   +   A L E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVLAALQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GLE  FK   NP PW++
Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLELPFKTRSNPIPWIN 337


>gi|49237365|ref|YP_031646.1| ribonucleoside diphosphate reductase beta subunit-like protein
           [Frog virus 3]
 gi|47060183|gb|AAT09727.1| ribonucleoside diphosphate reductase beta subunit-like protein
           [Frog virus 3]
          Length = 387

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 10/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEF-----QQKSRTMLHEATLLEIAYAHETMPK 55
           +RDE++H+     +   +  E P + TK+      +   R    E   +++A+  E  P 
Sbjct: 252 VRDENIHVEGVSKLFETLNSEYPWVVTKDLIELFKEDAERVAELEEAFVDLAF-QECGP- 309

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDLKKEKNFFETRV 113
              GL     + Y+ ++ N R   +GL  L +      P PW+  +ID     NFFE  V
Sbjct: 310 -VCGLEPKQVKDYVLYVINLRAANMGLPKLIERAPEACPIPWVKWLIDGADLTNFFENHV 368

Query: 114 TEYQQGA 120
           TEY+ G 
Sbjct: 369 TEYETGG 375


>gi|326564074|gb|EGE14316.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 103P14B1]
 gi|326570555|gb|EGE20595.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis BC8]
 gi|326573198|gb|EGE23167.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis CO72]
          Length = 361

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 14/104 (13%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEA-TLLEIAYAHETM------- 53
           RDE+LHLN    ++  +  E+     +++Q  ++T   E   + E AY  E         
Sbjct: 225 RDEALHLNGTQHILTLLVKEH-----EDYQTITQTCKDEIYDIFESAYEQERAWIDYLFK 279

Query: 54  PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
               +GLN     QY+Q+I + R   IGLEP+F  T+NP PW++
Sbjct: 280 DGSMIGLNKEILTQYLQYITDIRMSAIGLEPVFN-TKNPIPWIN 322


>gi|326567429|gb|EGE17544.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis BC1]
          Length = 361

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 14/104 (13%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEA-TLLEIAYAHETM------- 53
           RDE+LHLN    ++  +  E+     +++Q  ++T   E   + E AY  E         
Sbjct: 225 RDEALHLNGTQHILTLLVKEH-----EDYQTITQTCKDEIYDIFESAYEQERAWIDYLFK 279

Query: 54  PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
               +GLN     QY+Q+I + R   IGLEP+F  T+NP PW++
Sbjct: 280 DGSMIGLNKEILTQYLQYITDIRMSAIGLEPVFN-TKNPIPWIN 322


>gi|27375117|ref|NP_766646.1| ribonucleotide-diphosphate reductase subunit beta [Bradyrhizobium
           japonicum USDA 110]
 gi|27348253|dbj|BAC45271.1| ribonucleoside-diphosphate reductase beta subunit [Bradyrhizobium
           japonicum USDA 110]
          Length = 360

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 32/147 (21%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58
           +RDESLH   GI       I+  H W +E    +R +  +  ++++A     + + FV  
Sbjct: 212 VRDESLHCE-GI-------IKLFHEWHRETGAVTRPVRDD--IVDVAKTMVKLEENFVEL 261

Query: 59  --------GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----------NPFPWMSEV 99
                   G+       Y++++A+ R  Q+ + P+F + E           +P PW+ E+
Sbjct: 262 AFGLGKIEGMLPEHIHAYVRYVADWRLAQLRIAPVFGFFEAKEGGFTQLKAHPLPWLVEI 321

Query: 100 IDLKKEKNFFETRVTEYQQGAEL-KWD 125
           ++  +  NFFE R TEY + A    WD
Sbjct: 322 LNGVEHANFFEQRATEYSKAASRGSWD 348


>gi|170587050|ref|XP_001898292.1| ribonucleotide reductase 2 [Brugia malayi]
 gi|158594687|gb|EDP33271.1| ribonucleotide reductase 2, putative [Brugia malayi]
          Length = 288

 Score = 50.4 bits (119), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 51/91 (56%), Gaps = 2/91 (2%)

Query: 32  QKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN 91
           +K  +M +     +  Y  E +P   +G+N     QY++++A+    ++    ++ +++N
Sbjct: 186 KKFTSMFNACIDAKQEYLTEALPVDLIGINCKLMCQYIEYVADHLLTELHCAKIY-HSDN 244

Query: 92  PFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122
           PF +M E I ++ + NFFE RV+EYQ+   L
Sbjct: 245 PFDFM-ERISIEAKTNFFEKRVSEYQKAGVL 274


>gi|261404531|ref|YP_003240772.1| Ribonucleoside-diphosphate reductase [Paenibacillus sp. Y412MC10]
 gi|261280994|gb|ACX62965.1| Ribonucleoside-diphosphate reductase [Paenibacillus sp. Y412MC10]
          Length = 343

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 5/119 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ H  F  +V  Q+  + P L TKE        +  A  LE  +AH T+     G++
Sbjct: 214 RDENQHCYFFAEVFKQLLKDFPELNTKENIDYLYRTIDRAVELETNWAHYTL-SNVRGID 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LKKEK-NFFETRVTEY 116
                 Y+++IANRR   +GLE  ++  + N  PW+    D  L   K +FFE +   Y
Sbjct: 273 LNELSDYIKYIANRRITMMGLEKAYEGVDVNCMPWIKPFSDEALNATKTDFFEAKSRNY 331


>gi|288928561|ref|ZP_06422408.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
           oral taxon 317 str. F0108]
 gi|288331395|gb|EFC69979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
           oral taxon 317 str. F0108]
          Length = 348

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I+++K E P  +T E  +    M+ E    EIA+    +     GLN
Sbjct: 220 RDENTHLWLFRNIIHEMKKEEPEYFTPEKVKVYEEMMREGVRQEIAWGQYVIGDEVQGLN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
           A     Y++++ N R   +G   L +   E P    W+++  +    K +FFE + T Y 
Sbjct: 280 AQMVNDYIRYLGNMRWRSLGFGNLLEDNIEEPENMRWVAQYANANMVKTDFFEAKSTAYA 339

Query: 118 QGAELKWD 125
           +   ++ D
Sbjct: 340 KSTAIEDD 347


>gi|228861279|ref|YP_002854302.1| ribonucleotide reductase small subunit [Soft-shelled turtle
           iridovirus]
 gi|45550045|gb|AAS67856.1| ribonucleotide reductase small subunit [Rana grylio virus 9506]
 gi|194307559|gb|ACF42289.1| ribonucleotide reductase small subunit [Soft-shelled turtle
           iridovirus]
          Length = 387

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 10/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEF-----QQKSRTMLHEATLLEIAYAHETMPK 55
           +RDE++H+     +   +  E P + TK+      +   R    E   +++A+  E  P 
Sbjct: 252 VRDENIHVEGVSKLFETLNSEYPWVVTKDLIELFKEDAERVAELEEAFVDLAF-QECGP- 309

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDLKKEKNFFETRV 113
              GL     + Y+ ++ N R   +GL  L +      P PW+  +ID     NFFE  V
Sbjct: 310 -VCGLEPKQVKDYVLYVINLRAANMGLPKLIERAPEACPIPWVKWLIDGADLTNFFENHV 368

Query: 114 TEYQQGA 120
           TEY+ G 
Sbjct: 369 TEYETGG 375


>gi|329922162|ref|ZP_08277907.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           sp. HGF5]
 gi|328942352|gb|EGG38619.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           sp. HGF5]
          Length = 370

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 5/119 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ H  F  +V  Q+  + P L TKE        +  A  LE  +AH T+     G++
Sbjct: 241 RDENQHCYFFAEVFKQLLKDFPELNTKENIDYLYRTIDRAVELETNWAHYTL-SNVRGID 299

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LKKEK-NFFETRVTEY 116
                 Y+++IANRR   +GLE  ++  + N  PW+    D  L   K +FFE +   Y
Sbjct: 300 LNELSDYIKYIANRRITMMGLEKAYEGVDVNCMPWIKPFSDEALNATKTDFFEAKSRNY 358


>gi|332708567|ref|ZP_08428541.1| ribonucleotide reductase, beta subunit [Lyngbya majuscula 3L]
 gi|332352664|gb|EGJ32230.1| ribonucleotide reductase, beta subunit [Lyngbya majuscula 3L]
          Length = 344

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 37  MLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPF 93
           M   A   E  + +  +    +G+   S E Y +++AN R   IGL+PL+K   Y ++P+
Sbjct: 246 MFATAVEHECRWTNHIVGNDILGITERSTEHYTKYLANIRLRSIGLDPLYKGENYQKSPY 305

Query: 94  PWMSEVIDLKKE----KNFFETRVTEYQQGAELK-WD 125
             +    D KK+     NFFE  VT Y   + +  WD
Sbjct: 306 SHLERFSDTKKDAHTKANFFEASVTSYVMSSGVSGWD 342


>gi|70937204|ref|XP_739440.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56516443|emb|CAH87750.1| hypothetical protein PC302623.00.0 [Plasmodium chabaudi chabaudi]
          Length = 72

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 37/55 (67%), Gaps = 2/55 (3%)

Query: 66  EQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            QY++F+A+R    +G   +F +++NPF WM ++I L+ + NFFE RV +YQ+  
Sbjct: 4   SQYIEFVADRLLECLGCSKVF-HSKNPFSWM-DLISLQGKTNFFEKRVADYQKSG 56


>gi|221134587|ref|ZP_03560892.1| ribonucleotide-diphosphate reductase subunit beta [Glaciecola sp.
           HTCC2999]
          Length = 376

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 5/105 (4%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     V+N      ++P +    KE +Q++R +   A   E  +A      G 
Sbjct: 237 RDENLHLTSTQHVLNLWAKGKDDPEMAEIAKECEQEARDIFLNAVQQEKEWAAFLFNNGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101
            +GLN      Y+++IAN+R   IGL   F  + NP PWM+  ++
Sbjct: 297 MIGLNEEILCSYVEYIANQRMAAIGLGQPFDVSSNPLPWMNNYLN 341


>gi|168702485|ref|ZP_02734762.1| ribonucleotide-diphosphate reductase small chain [Gemmata
           obscuriglobus UQM 2246]
          Length = 70

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 2/62 (3%)

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
            GL+      Y ++ A+RR   +G+ P+F  T+NPF +M ++ D+++  NFFE RV+ YQ
Sbjct: 2   AGLSCRDLRSYPEYAADRRLESLGIAPVFG-TKNPFGFM-DLQDVQELTNFFERRVSAYQ 59

Query: 118 QG 119
            G
Sbjct: 60  LG 61


>gi|326784150|ref|YP_004324543.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn1]
 gi|310004882|gb|ADO99273.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn1]
          Length = 395

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 6/100 (6%)

Query: 2   RDESLHLNFGIDVINQIK-IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           RDES H+    +++N+ K  ++P +    +E ++    M ++    E+ +A      G  
Sbjct: 255 RDESQHMTITQNILNKWKQGDDPDMVEIAQEEEKNVYEMFNKCVEEEVIWADYLFRDGSM 314

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFK--YTENPFPW 95
           +GLNA   ++Y+++ ANRR   IGL+P F    + NP PW
Sbjct: 315 IGLNAKLLQKYVEWTANRRMKSIGLKPTFDAPLSNNPLPW 354


>gi|297724673|ref|NP_001174700.1| Os06g0257450 [Oryza sativa Japonica Group]
 gi|255676900|dbj|BAH93428.1| Os06g0257450 [Oryza sativa Japonica Group]
          Length = 162

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 2/64 (3%)

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +N     QY++F+A+R    +G + ++    NPF WM E+I L+ + NFFE RV +YQ+ 
Sbjct: 83  MNGDLMSQYIEFVADRLLMALGCKKMYNVA-NPFDWM-ELISLQGKTNFFEKRVGDYQKA 140

Query: 120 AELK 123
           + + 
Sbjct: 141 SVMS 144


>gi|61806369|ref|YP_214728.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM4]
 gi|61563913|gb|AAX46968.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM4]
          Length = 387

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVINQ-IKIENPHLWTKEFQQKS--RTMLHEATLLEIAYAHETMPKG-F 57
           RDES HL     ++ +    ++P +     ++KS  + M       E A+A     +G  
Sbjct: 247 RDESQHLVITQQILKKWADGDDPEMQEIAKEEKSFVKDMFRNTVNEEKAWADYLFKEGSM 306

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFK--YTENPFPWMSEVIDLKKEKNF-FETRVT 114
           +GLNA     Y+++IANRR   IGL+P++      NP PW    ++ K ++N   ET + 
Sbjct: 307 IGLNARLLNNYVEWIANRRMKAIGLDPIYDQPLRNNPLPWTEHWLNSKGQQNAPQETEIE 366

Query: 115 EYQQGA 120
            Y  G 
Sbjct: 367 SYVIGG 372


>gi|283832326|ref|ZP_06352067.1| ribonucleoside-diphosphate reductase, beta subunit [Citrobacter
           youngae ATCC 29220]
 gi|291071973|gb|EFE10082.1| ribonucleoside-diphosphate reductase, beta subunit [Citrobacter
           youngae ATCC 29220]
          Length = 376

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A L E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAALQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|88801048|ref|ZP_01116596.1| ribonucleotide-diphosphate reductase beta subunit [Reinekea sp.
           MED297]
 gi|88776187|gb|EAR07414.1| ribonucleotide-diphosphate reductase beta subunit [Reinekea sp.
           MED297]
          Length = 369

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 7/101 (6%)

Query: 2   RDESLHLNFGIDVINQIKI---ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
           RDE+LHL+ G + I +  +   ++P +     E Q   R +  +A   E A+A+     G
Sbjct: 230 RDEALHLS-GTEFILRQWLHGGDDPQMQIVADEEQATIRQIFEDAAEQEKAWANYLFNDG 288

Query: 57  -FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
             +GLNA    QY++++ ++R   + L P++   +NP PWM
Sbjct: 289 SMIGLNAEILHQYIEYLTDQRLDALSLSPIYGRRDNPLPWM 329


>gi|308067265|ref|YP_003868870.1| ribonucleoside-diphosphate reductase beta subunit (ribonucleotide
           reductase small subunit) [Paenibacillus polymyxa E681]
 gi|305856544|gb|ADM68332.1| Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide
           reductase small subunit) [Paenibacillus polymyxa E681]
          Length = 343

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 5/119 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ H  F  +V  Q+  + P L TKE       M++ A  LE  +AH T+ K   G++
Sbjct: 214 RDENQHCYFFAEVFKQLLSDFPELNTKENTDYVYRMINRAVELETNWAHYTL-KEVRGID 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LKKEK-NFFETRVTEY 116
                 Y++++AN R   +G++  ++  + N  PW+    D  L   K +FFE +   Y
Sbjct: 273 LNELSDYIKYMANMRLRLLGMDKAYEGVDVNCMPWIKPFSDEALNATKTDFFEAKSRNY 331


>gi|224539244|ref|ZP_03679783.1| hypothetical protein BACCELL_04146 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519126|gb|EEF88231.1| hypothetical protein BACCELL_04146 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 349

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I ++K E P L+T +  Q    M+ E    EI +    +     GLN
Sbjct: 221 RDENTHLWLFRSIILELKKEEPELFTPDKVQIYENMMREGVKQEIEWGQYVIGDNIQGLN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK----EKNFFETRVTEYQ 117
                 Y+ ++ N R   +G  PL+++       M  V+        + +FFE + T Y 
Sbjct: 281 RQMIADYIHYLGNLRWSSLGNPPLYEHNRKEPESMHWVLQYSNANMVKTDFFEAKSTAYA 340

Query: 118 QGAELKWD 125
           +   L+ D
Sbjct: 341 KSTALEDD 348


>gi|237732274|ref|ZP_04562755.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter sp.
           30_2]
 gi|226907813|gb|EEH93731.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter sp.
           30_2]
          Length = 376

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A L E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAALQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|302386033|ref|YP_003821855.1| ribonucleotide reductase [Clostridium saccharolyticum WM1]
 gi|302196661|gb|ADL04232.1| ribonucleotide reductase [Clostridium saccharolyticum WM1]
          Length = 368

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ E P L+++E  +  RTM+ E    EIA+    +     GL 
Sbjct: 240 RDENTHLWLFRNIILELEKEEPKLFSRERIEVYRTMIKEGCEQEIAWGCYAIGDEVPGLT 299

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y+ ++ N RC  +G   +++ + + P    W+++  +    K +FFE + T Y 
Sbjct: 300 KEMITDYIMYLGNLRCASLGWGRIYEGHDKEPESMSWVNQFSNANLIKTDFFEAKSTAYA 359

Query: 118 QGAEL 122
           + + L
Sbjct: 360 KSSAL 364


>gi|288801822|ref|ZP_06407264.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           melaninogenica D18]
 gi|302344783|ref|YP_003813136.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           melaninogenica ATCC 25845]
 gi|288335864|gb|EFC74297.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           melaninogenica D18]
 gi|302149273|gb|ADK95535.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           melaninogenica ATCC 25845]
          Length = 348

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 8/127 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I ++K E P ++T E  +    M+ E    EIA+    +     GLN
Sbjct: 220 RDENTHLWLFRSIILELKKEEPDMFTPEKIKVYEDMMREGVRQEIAWGQYVIGNDVQGLN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENP-----FPWMSEVIDLKKEK-NFFETRVTE 115
           A     Y++++ N R   +G    F Y +N        W+ +  +    K +FFE + T 
Sbjct: 280 AQMVSDYIRYLGNLRWSGLGFG--FLYDDNQKEPENMKWVGQYSNANMVKTDFFEAKSTA 337

Query: 116 YQQGAEL 122
           Y +   L
Sbjct: 338 YAKSTAL 344


>gi|83592781|ref|YP_426533.1| ribonucleotide-diphosphate reductase subunit beta [Rhodospirillum
           rubrum ATCC 11170]
 gi|83575695|gb|ABC22246.1| Ribonucleoside-diphosphate reductase [Rhodospirillum rubrum ATCC
           11170]
          Length = 358

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 32/147 (21%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58
           +RDESLH   GI       I   H W +E    ++ +  +  +L++A     + + FV  
Sbjct: 206 VRDESLHCQ-GI-------IRLFHEWNRETGALTKPVRDD--ILDVATTMVGLEEKFVDL 255

Query: 59  --------GLNAPSCEQYMQFIANRRCHQIGLEPL---FKYTE--------NPFPWMSEV 99
                   G+ A   + Y++++A+ R  Q+ L  L   F+ TE        +P PW+ E+
Sbjct: 256 AFELGAIEGMRAEDIKSYVRYVADWRLTQLKLPILYGHFRETEAGYEQLRPHPLPWLVEI 315

Query: 100 IDLKKEKNFFETRVTEYQQGA-ELKWD 125
           ++  +  NFFE R TEY + A +  WD
Sbjct: 316 LNGVEHANFFEQRSTEYSKAATQGAWD 342


>gi|313900116|ref|ZP_07833616.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
           HGF2]
 gi|312955168|gb|EFR36836.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
           HGF2]
          Length = 347

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L+T+E  ++ + ML      EI +    +     GL 
Sbjct: 219 RDENTHLWLFRSMILELQKEEPQLFTEELIEEYKDMLRHGVEEEIRWGEYVIGNHIEGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y+ ++ N R + +G   L+   EN      W+S   +    K +FFE R + Y 
Sbjct: 279 MEMVSDYIHYLGNLRSNSLGFGSLYDGFENEPKSMEWVSMYANANLIKTDFFEARSSAYA 338

Query: 118 QGAEL 122
           + + L
Sbjct: 339 KSSAL 343


>gi|330829606|ref|YP_004392558.1| ribonucleoside diphosphate reductase 1 subunit beta, ferritin-like
           protein [Aeromonas veronii B565]
 gi|328804742|gb|AEB49941.1| Ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Aeromonas veronii B565]
          Length = 393

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E +Q    +  EA + E  +A      G 
Sbjct: 253 RDEALHLTGTQHMLNLMRTGQDDPEMAEIAAECEQACFEIFKEAAIQEKEWAEYLFQDGS 312

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMS 97
            +GLN     QY+++I N R   +GL+P F  T +NP PW++
Sbjct: 313 MIGLNKDILCQYVEYITNLRMSAVGLQPAFAGTKQNPIPWIN 354


>gi|303389600|ref|XP_003073032.1| ribonucleoside-diphosphate reductase small subunit [Encephalitozoon
           intestinalis ATCC 50506]
 gi|303302176|gb|ADM11672.1| ribonucleoside-diphosphate reductase small subunit [Encephalitozoon
           intestinalis ATCC 50506]
          Length = 326

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 62/118 (52%), Gaps = 10/118 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F   +  +        + K+  ++ + ++ +A  +E  +  E++P   +G+N
Sbjct: 202 RDEGLHCEFACLLHRR--------YLKQKCKRVKEVVMDAVEVEKRFLSESLPVDLIGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                +Y++F+A+     +  E ++ +T NPF +M E I L  + NFF+ R ++YQ+ 
Sbjct: 254 CQLMCKYIEFVADTLLENLEEEKIY-HTPNPFDFM-ENISLVGKTNFFDKRESQYQKA 309


>gi|488081|gb|AAA56996.1| ribonucleoside-diphosphate reductase small subunit [Drosophila
           melanogaster]
          Length = 214

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 55/101 (54%), Gaps = 9/101 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +         HL  +  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 120 RDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMN 172

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL 102
                QY++F+A+R   ++G+  ++  T+NPF +M E+I L
Sbjct: 173 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISL 211


>gi|297582631|ref|YP_003698411.1| ribonucleoside-diphosphate reductase [Bacillus selenitireducens
           MLS10]
 gi|297141088|gb|ADH97845.1| Ribonucleoside-diphosphate reductase [Bacillus selenitireducens
           MLS10]
          Length = 347

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 4/118 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F    +  +  ++P L T+E  Q     +  A  LE  +A   +     G++
Sbjct: 219 RDEMQHAYFMSQFVRILLTDHPELNTRENVQYVYDAMASAAGLEQEWA-AVILADIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM---SEVIDLKKEKNFFETRVTEY 116
                 Y++++ N+R  Q+GL  LF   +NP PW+   S+ +  + + +FFE +   Y
Sbjct: 278 LGEFNGYVEYLVNKRLRQLGLSNLFPERDNPMPWIHVFSDTMMNQTKSDFFEQKSRSY 335


>gi|332993182|gb|AEF03237.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas sp.
           SN2]
          Length = 376

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 5/105 (4%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL+    ++N      ++P +    ++ ++++R +   A   E  +A      G 
Sbjct: 237 RDENLHLSSTQHILNLWARSKDDPEMAQIAQDCKEEARAIFMNAVEQEKEWADYLFKTGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101
            +GLN      Y+++IAN+R   IGL+  F+ + NP PWM+  ++
Sbjct: 297 MIGLNKEILCSYVEYIANQRMTAIGLDAPFEISSNPLPWMNNYLN 341


>gi|90407600|ref|ZP_01215781.1| ribonucleoside-diphosphate reductase beta chain [Psychromonas sp.
           CNPT3]
 gi|90311303|gb|EAS39407.1| ribonucleoside-diphosphate reductase beta chain [Psychromonas sp.
           CNPT3]
          Length = 424

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 24/134 (17%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTML-----HEATLLEIAYAH---ETM 53
           ++E LH NFGID+I  IK ENP  + +E+QQ  RT+       E+ +++  YA    + +
Sbjct: 293 KEEQLHGNFGIDLIQIIKQENPSWFNEEYQQSVRTLCLQAFKSESKIIDWIYAEGELDFI 352

Query: 54  PKGFVGLNAPSCEQYMQFIANR---RCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKN 107
           PK           Q  +FI NR       I +E +F+  E       W  + I   K  +
Sbjct: 353 PKA----------QVKEFIKNRFNQSLQSIDIEKVFEIDEKLLEKTEWFDDEIIGTKHGD 402

Query: 108 FFETRVTEYQQGAE 121
           FF  R   Y + ++
Sbjct: 403 FFVKRSINYNKRSK 416


>gi|257373022|ref|YP_003175796.1| ribonucleotide reductase [Halomicrobium mukohataei DSM 12286]
 gi|257167746|gb|ACV49438.1| ribonucleotide reductase [Halomicrobium mukohataei DSM 12286]
          Length = 336

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 64/124 (51%), Gaps = 4/124 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60
           ++E +H  FG++++  I+ ENP L+ ++F+++ +    +A   E+        +G +  L
Sbjct: 205 KEEQIHGLFGVELVETIREENPDLFDEDFEEEVQAACQQAFEAEMKILDWIFGEGELEFL 264

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
                + +++   N+    +G+EP+F+  E+      W  E I + K+ +FF  R T Y 
Sbjct: 265 PRAHVDAFLRDRFNQSLENVGVEPIFEPDEDLLEETRWFDEDIMMTKDNDFFSKRSTTYN 324

Query: 118 QGAE 121
           + A+
Sbjct: 325 KHAQ 328


>gi|13358428|ref|NP_078636.1| Ribonucleotide reductase small subunit [Lymphocystis disease virus
           1]
          Length = 378

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 9/123 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE-----IAYAHETMPK 55
           +RDE++H+     +      E   + T+EF    R +  E   LE     + + + T  K
Sbjct: 251 IRDENIHVEGLCKLFKTFISEYSFILTEEFFSAVRKIQAEVLQLETDFIILLFTNITEIK 310

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGL-EPLFKYTENPFPWMSEVIDLKKEKNFFETRVT 114
           G   L   +   Y+++I  RR  Q+GL E       NP  W+S +I  +   NFFE RVT
Sbjct: 311 GLTKLCMIN---YVKYILQRRTEQLGLLESTEVLLTNPIDWISWLIAGRNITNFFENRVT 367

Query: 115 EYQ 117
           EY 
Sbjct: 368 EYD 370


>gi|89092731|ref|ZP_01165684.1| ribonucleotide-diphosphate reductase beta subunit [Oceanospirillum
           sp. MED92]
 gi|89083243|gb|EAR62462.1| ribonucleotide-diphosphate reductase beta subunit [Oceanospirillum
           sp. MED92]
          Length = 376

 Score = 48.9 bits (115), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P      KE +Q    +  EA   E  +A     +G 
Sbjct: 237 RDEALHLTGTQHMLNIMASGADDPDYKDIAKECEQDVYNIFKEAAQQEKDWAQYLFREGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLNA     Y+++I N R   + LE +F   +NP PWM+
Sbjct: 297 MIGLNAQILSDYVEYITNVRMKALNLEEIFPARQNPLPWMN 337


>gi|259907948|ref|YP_002648304.1| ribonucleotide-diphosphate reductase subunit beta [Erwinia
           pyrifoliae Ep1/96]
 gi|224963570|emb|CAX55060.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           pyrifoliae Ep1/96]
 gi|283477829|emb|CAY73745.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           pyrifoliae DSM 12163]
 gi|310768143|gb|ADP13093.1| ribonucleotide-diphosphate reductase subunit beta [Erwinia sp.
           Ejp617]
          Length = 376

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    KE +Q+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAKECRQECYDLFVLAAEQEKEWAEYLFSGGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R + +GL+  FK   NP PW++
Sbjct: 297 MIGLNKDILCQYIEYITNIRMNAVGLDLPFKTRSNPIPWIN 337


>gi|145298925|ref|YP_001141766.1| ribonucleotide-diphosphate reductase subunit beta [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142851697|gb|ABO90018.1| ribonucleoside-diphosphate reductase, beta subunit [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 377

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +   + E +Q    +  EA + E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRTGQDDPEMAEISAECEQACFEIFKEAAIQEKEWAEYLFQDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMS 97
            +GLN     QY+++I N R + +GL+P F    +NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNLRMNAVGLQPAFAGAKQNPIPWIN 338


>gi|188533366|ref|YP_001907163.1| ribonucleotide-diphosphate reductase subunit beta [Erwinia
           tasmaniensis Et1/99]
 gi|188028408|emb|CAO96269.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           tasmaniensis Et1/99]
          Length = 376

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    KE +Q+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAKECRQECYDLFVLAAEQEKEWAEYLFSGGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R + +GL+  FK   NP PW++
Sbjct: 297 MIGLNKDILCQYIEYITNIRMNAVGLDLPFKTRSNPIPWIN 337


>gi|292488819|ref|YP_003531706.1| ribonucleoside-diphosphate reductase 1 subunit beta [Erwinia
           amylovora CFBP1430]
 gi|292899970|ref|YP_003539339.1| ribonucleoside-diphosphate reductase 1 subunit beta [Erwinia
           amylovora ATCC 49946]
 gi|291199818|emb|CBJ46941.1| ribonucleoside-diphosphate reductase 1 beta subunit [Erwinia
           amylovora ATCC 49946]
 gi|291554253|emb|CBA21550.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           amylovora CFBP1430]
 gi|312172977|emb|CBX81232.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           amylovora ATCC BAA-2158]
          Length = 376

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    KE +Q+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAKECRQECYDLFVLAAEQEKEWAEYLFSGGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R + +GL+  FK   NP PW++
Sbjct: 297 MIGLNKDILWQYIEYITNIRMNAVGLDLPFKTRSNPIPWIN 337


>gi|45686047|ref|YP_003810.1| unknown [Ambystoma tigrinum virus]
 gi|37722471|gb|AAP33216.1| unknown [Ambystoma tigrinum stebbensi virus]
          Length = 387

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 10/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEF-----QQKSRTMLHEATLLEIAYAHETMPK 55
           +RDE++H+     +   +  E P + T++      +   R    E   +++A+  E  P 
Sbjct: 252 VRDENIHVEGVSKLFETLNSEYPWVVTEDLIELFKEDAERVAELEEAFVDLAF-QECGP- 309

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDLKKEKNFFETRV 113
              GL     + Y+ ++ N R   +GL  L +      P PW+  +ID     NFFE  V
Sbjct: 310 -VCGLEPKQVKDYVLYVINLRASNMGLPRLIERAPEACPIPWVKWLIDGADLTNFFENHV 368

Query: 114 TEYQQGA 120
           TEY+ G 
Sbjct: 369 TEYETGG 375


>gi|58532963|ref|YP_195186.1| ribonucleotide reductase A subunit [Synechococcus phage S-PM2]
 gi|58331430|emb|CAF34216.1| ribonucleotide reductase A subunit [Synechococcus phage S-PM2]
          Length = 394

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 6/100 (6%)

Query: 2   RDESLHLNFGIDVINQIKI-ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           RDES H+    ++IN+ K  ++P +    K+ +     M  +    EI +A      G  
Sbjct: 254 RDESQHMTITQNIINKWKAGDDPDMVEIAKQEENNVYDMFKKCVEEEIIWADYLFRDGSM 313

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPW 95
           +GLNA   ++Y+++ ANRR   IG++ +F    + NP PW
Sbjct: 314 IGLNAKLLQKYVEWTANRRMKAIGMKQIFDVPLSNNPLPW 353


>gi|282860353|ref|ZP_06269421.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           bivia JCVIHMP010]
 gi|282586851|gb|EFB92088.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           bivia JCVIHMP010]
          Length = 347

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T E       M+ E    EIA+    +     GL 
Sbjct: 219 RDENTHLWLFRNMIIELKQEEPELFTPEKVAIYEAMMREGVAQEIAWGQYVIGNEVQGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N R   +G + LF+  +       W+++  +    K +FFE + T Y 
Sbjct: 279 QQMVSDYIRYLGNLRWKSLGFDYLFEDNQTEPTDMEWVAQYSNANMVKTDFFEAKSTAYA 338

Query: 118 QGAEL 122
           +   L
Sbjct: 339 KSTAL 343


>gi|254361270|ref|ZP_04977413.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           PHL213]
 gi|153092766|gb|EDN73809.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           PHL213]
          Length = 376

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKIEN--PHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +   N  P +    +E +Q++  +   A   E A+A      G 
Sbjct: 237 RDEALHLTGTQHILNIMAYGNDDPEMAEIARECRQEAYELFLSAAEQEKAWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   FK   NP PW++
Sbjct: 297 MIGLNRDILVQYIEYITNIRMQAVGLPLPFKARSNPIPWIN 337


>gi|23100542|ref|NP_694009.1| ribonucleotide-diphosphate reductase subunit beta [Oceanobacillus
           iheyensis HTE831]
 gi|22778775|dbj|BAC15043.1| ribonucleoside-diphosphate reductase beta subunit [Oceanobacillus
           iheyensis HTE831]
          Length = 347

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 4/124 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++      ENP     EF         ++  LEI ++H  + K   G++
Sbjct: 219 RDELEHGRFITELFRATLEENPSHNNAEFIDWIYDRFQQSVELEIEWSHYVLNK-LEGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
               + Y+++ AN+    +GLE L+ ++ ENP  W+   +D     + +FFE +  +Y +
Sbjct: 278 MDDMDGYIKYRANKMLRMMGLEELYPQHVENPMKWVRAYVDNFDGTKTDFFEQKSRQYTK 337

Query: 119 GAEL 122
            ++L
Sbjct: 338 TSDL 341


>gi|326782198|ref|YP_004322599.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM1]
 gi|310004405|gb|ADO98798.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM1]
          Length = 395

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTK---EFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           RDES HL     +I + +  +     +   E +     M   A   E A+A      G  
Sbjct: 255 RDESQHLVLTQQIIKKWQDGDDEEMVRIAEEEKSNVLKMFKNAVEEEKAWASYLFKNGSM 314

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEKNF-FETRVT 114
           +GLN     QY++F ANRR   IGL+P++  +   NP PW    ++ K ++N   ET + 
Sbjct: 315 IGLNEKLLGQYVEFTANRRMKAIGLDPIYDISPRNNPLPWTQYWLNSKGQQNAPQETEIE 374

Query: 115 EYQQGA 120
            Y  G 
Sbjct: 375 SYVIGG 380


>gi|300717619|ref|YP_003742422.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           billingiae Eb661]
 gi|299063455|emb|CAX60575.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           billingiae Eb661]
          Length = 376

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLL----EIAYAHETMPKG- 56
           RDE+LHL     ++N ++         E  ++SR   ++  +L    E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGEDDPEMAEIARESRQECYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R H +GL+  FK   NP PW++
Sbjct: 297 MIGLNKDILCQYIEYITNIRMHAVGLDLPFKTRSNPIPWIN 337


>gi|261493906|ref|ZP_05990416.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
 gi|261495801|ref|ZP_05992236.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261308535|gb|EEY09803.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261310439|gb|EEY11632.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
          Length = 376

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKIEN--PHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +   N  P +    +E +Q++  +   A   E A+A      G 
Sbjct: 237 RDEALHLTGTQHILNIMTYGNDDPEMAEIARECRQEAYELFLSAAEQEKAWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   FK   NP PW++
Sbjct: 297 MIGLNRDILVQYIEYITNIRMQAVGLPLPFKARSNPIPWIN 337


>gi|207108882|ref|ZP_03243044.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori HPKX_438_CA4C1]
          Length = 79

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 39/64 (60%), Gaps = 2/64 (3%)

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEY 116
           +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y
Sbjct: 11  LGLTSSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNY 69

Query: 117 QQGA 120
            +G+
Sbjct: 70  AKGS 73


>gi|326783148|ref|YP_004323545.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM2]
 gi|310005566|gb|ADO99954.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM2]
          Length = 394

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTK---EFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           RDES HL     +I + +  +     +   E +     M   A   E A+A      G  
Sbjct: 254 RDESQHLVLTQQIIKKWQDGDDEEMVRIAEEEKPNVLKMFQNAVEEEKAWAQYLFKNGSM 313

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEKNF-FETRVT 114
           +GLN     QY++F ANRR   IGL+P++  +   NP PW    ++ K ++N   ET + 
Sbjct: 314 IGLNEKLLGQYVEFTANRRMKAIGLDPIYDISPRNNPLPWTQYWLNSKGQQNAPQETEIE 373

Query: 115 EYQQGA 120
            Y  G 
Sbjct: 374 SYVIGG 379


>gi|307565004|ref|ZP_07627521.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           amnii CRIS 21A-A]
 gi|307346317|gb|EFN91637.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           amnii CRIS 21A-A]
          Length = 347

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T E       M+ E    EIA+    +     GL 
Sbjct: 219 RDENTHLWLFRNIIVELKQEEPDLFTPEKVAVYEEMMREGVRQEIAWGQYVIGNDVQGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N R   +G + LF+  +       W+++  +    K +FFE + T Y 
Sbjct: 279 QQMVYDYIRYLGNLRWKSLGFDYLFEDNQAEPADMQWVAQYSNANMVKTDFFEAKSTAYA 338

Query: 118 QGAEL 122
           +   L
Sbjct: 339 KSTAL 343


>gi|157144813|ref|YP_001452132.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter
           koseri ATCC BAA-895]
 gi|157082018|gb|ABV11696.1| hypothetical protein CKO_00540 [Citrobacter koseri ATCC BAA-895]
          Length = 376

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  I++P +    +E +Q    +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGIDDPEMAEIAEESKQACYDLFVQAAQQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GLE  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLELPFQTRSNPIPWIN 337


>gi|119944866|ref|YP_942546.1| ribonucleotide-diphosphate reductase subunit beta [Psychromonas
           ingrahamii 37]
 gi|119863470|gb|ABM02947.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Psychromonas ingrahamii 37]
          Length = 381

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHLWTKEFQ--QKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    ++N      ++P +     +   + R +  +A   E  +A      G 
Sbjct: 242 RDEALHLNSTQQILNLWADGKDDPEMAEIAIECFAEGREIFLQAAQQEKDWAKYLFKDGS 301

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++IAN R   IG  P F+   NP PW++
Sbjct: 302 MIGLNEQILSQYVEYIANLRMQAIGYAPEFEVKSNPIPWIN 342


>gi|283786035|ref|YP_003365900.1| ribonucleoside-diphosphate reductase 1 beta chain [Citrobacter
           rodentium ICC168]
 gi|282949489|emb|CBG89102.1| ribonucleoside-diphosphate reductase 1 beta chain [Citrobacter
           rodentium ICC168]
          Length = 376

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A L E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAALQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|326783253|ref|YP_004323801.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn33]
 gi|310005200|gb|ADO99589.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn33]
          Length = 296

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVINQIKI-ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           RDES HL    +++N+ +  ++P +    KE Q    +M   A   E  +A      G  
Sbjct: 156 RDESQHLVLTQNILNKWRDGDDPEMDIIAKEEQSWVMSMFQRAVDEEKMWAEYLFKNGSM 215

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114
           +GLN      Y+++IANRR   I ++P+F      NP PW    ++ K ++N   ET + 
Sbjct: 216 IGLNERLLHNYVEWIANRRMKAICIKPMFDIPAKNNPLPWTEHWLNSKGQQNAPQETEIE 275

Query: 115 EYQQGA 120
            Y  G 
Sbjct: 276 SYVIGG 281


>gi|229916488|ref|YP_002885134.1| ribonucleotide-diphosphate reductase subunit beta [Exiguobacterium
           sp. AT1b]
 gi|229467917|gb|ACQ69689.1| Ribonucleoside-diphosphate reductase [Exiguobacterium sp. AT1b]
          Length = 346

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 6/122 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL-WTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE  H  F   ++  +  ENP +    +F Q     + EA  LEI +  E + +   GL
Sbjct: 216 RDEMQHSYFISQLLRAVLTENPKIDENGQFSQFVYDTMAEAVDLEIEWC-EYVLRDLDGL 274

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLK---KEKNFFETRVTEY 116
           +      Y++++AN+R   IGL  L++ + E+  PW+    D      + +FFE +   Y
Sbjct: 275 DVSEMRDYVKYLANKRLRVIGLNDLYEGFDEDVMPWIRAYSDDSLNATKSDFFEQKSRSY 334

Query: 117 QQ 118
            +
Sbjct: 335 AK 336


>gi|33519930|ref|NP_878762.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Blochmannia floridanus]
 gi|33504276|emb|CAD83168.1| ribonucleoside-diphosphate reductase 1 beta chain [Candidatus
           Blochmannia floridanus]
          Length = 376

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLWTKEF--QQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDESLHLN    ++N ++   ++P +       Q++S  +   A   E  +AH     G 
Sbjct: 237 RDESLHLNATQHILNLMRSGSDDPEMVDISLICQEESYNLFLMAAEQEKTWAHYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   IGL+  F    N  PW++
Sbjct: 297 MIGLNKEILCQYIEYITNIRMQAIGLKTPFNTKTNSIPWIN 337


>gi|117619492|ref|YP_856857.1| ribonucleotide-diphosphate reductase subunit beta [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117560899|gb|ABK37847.1| ribonucleoside-diphosphate reductase, beta subunit [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 377

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E +Q    +  EA + E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGQDDPEMAEIAAECEQACFELFKEAAIQEKEWAEYLFQDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMS 97
            +GLN     QY+++I N R + +GL+P F    +NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNLRMNAVGLQPAFAGAKQNPIPWIN 338


>gi|307107666|gb|EFN55908.1| hypothetical protein CHLNCDRAFT_57791 [Chlorella variabilis]
          Length = 849

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 7/98 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H       +    +    L +K    +++ ++ EA   E A+    +P    GL 
Sbjct: 756 RDEGVH-------VESAGVMYSLLRSKLTDSQAQGIVGEAVEAERAFVCGQLPLEATGLE 808

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEV 99
           A + E+Y+Q++ +R    +G  PL++   NP PW+  +
Sbjct: 809 AGAMEEYLQYVGDRLLGALGHAPLYRVAANPLPWLEGI 846


>gi|326782458|ref|YP_004322858.1| ribonucleotide reductase A subunit [Synechococcus phage S-ShM2]
 gi|310003406|gb|ADO97803.1| ribonucleotide reductase A subunit [Synechococcus phage S-ShM2]
          Length = 386

 Score = 47.8 bits (112), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVI-NQIKIENPHLWTKEFQQKSRT--MLHEATLLEIAYAHETMPKG-F 57
           RDES HL    +++ N    ++P +     +++     M  +    E A+A      G  
Sbjct: 246 RDESQHLVITQNILKNWRDGDDPEMQQIALEEEENVIKMFAKTVDEEKAWAEYLFKDGSM 305

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114
           +GLN     QY+++IANRR   IGL+P++      NP PW    ++ K ++N   ET + 
Sbjct: 306 IGLNDRLLSQYVEWIANRRMKAIGLKPMYNVPAKSNPLPWTEHWLNSKGQQNAPQETEIE 365

Query: 115 EYQQGA 120
            Y  G 
Sbjct: 366 SYVIGG 371


>gi|300723737|ref|YP_003713044.1| ribonucleoside-diphosphate reductase 1 subunit beta [Xenorhabdus
           nematophila ATCC 19061]
 gi|297630261|emb|CBJ90912.1| ribonucleoside-diphosphate reductase 1, beta subunit [Xenorhabdus
           nematophila ATCC 19061]
          Length = 376

 Score = 47.8 bits (112), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    KE +QK   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAKECEQKCYDLFVDAAEQEKEWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLKLPFETRSNPIPWIN 337


>gi|71280050|ref|YP_269047.1| ribonucleotide-diphosphate reductase subunit beta [Colwellia
           psychrerythraea 34H]
 gi|71145790|gb|AAZ26263.1| ribonucleotide reductase, beta subunit [Colwellia psychrerythraea
           34H]
          Length = 376

 Score = 47.8 bits (112), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N  +   ++P +   ++E + +   +  +    E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNNWRSGKDDPEMKIISEELRDEGLQIFLDVVEQEKEWAQYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLNA    QY+++I+N+R   IG    F    NP PWM+
Sbjct: 297 MIGLNADILNQYIEYISNQRLTAIGFGAPFDIKSNPLPWMN 337


>gi|304414248|ref|ZP_07395616.1| ribonucleotide reductase beta subunit [Candidatus Regiella
           insecticola LSR1]
 gi|304283462|gb|EFL91858.1| ribonucleotide reductase beta subunit [Candidatus Regiella
           insecticola LSR1]
          Length = 381

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++   ++P +    KE Q     +  +A   E  +A      G 
Sbjct: 242 RDEALHLTGTQHIINLMREGTDDPEMAEIAKECQNNCFELFKKAAEQEKEWATYLFRDGS 301

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   FK   NP PW++
Sbjct: 302 MIGLNKDILCQYIEYITNIRMQAVGLALPFKIRSNPIPWIN 342


>gi|332297025|ref|YP_004438947.1| ribonucleotide reductase [Treponema brennaborense DSM 12168]
 gi|332180128|gb|AEE15816.1| ribonucleotide reductase [Treponema brennaborense DSM 12168]
          Length = 346

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 52/125 (41%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P ++T+E       ML E    EI +    +     GL 
Sbjct: 218 RDENTHLWLFKNIILELKKERPDMFTEEKVASYAEMLKEGVRQEIEWGEYVIGDDIPGLT 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPL---FKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y+ ++ N R   +   PL   F        W+S   +    K +FFE R T Y 
Sbjct: 278 RKMVRDYITYLGNLRWTNLDFPPLYPGFDTEPEDMAWVSAYSNANMVKTDFFEARSTAYA 337

Query: 118 QGAEL 122
           +   L
Sbjct: 338 KSTAL 342


>gi|226327851|ref|ZP_03803369.1| hypothetical protein PROPEN_01732 [Proteus penneri ATCC 35198]
 gi|225203555|gb|EEG85909.1| hypothetical protein PROPEN_01732 [Proteus penneri ATCC 35198]
          Length = 376

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  EA   E  +A     +G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAEECEQECYDLFVEAAEQEKEWAEYLFSEGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  FK   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLKLPFKARSNPIPWIN 337


>gi|115691069|ref|XP_001203692.1| PREDICTED: similar to ribonuleotide reductase small subunit,
           partial [Strongylocentrotus purpuratus]
 gi|115735426|ref|XP_798682.2| PREDICTED: similar to ribonuleotide reductase small subunit,
           partial [Strongylocentrotus purpuratus]
          Length = 258

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 31/117 (26%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +    P         + + ++ +A  LE  Y  E +P   +G+N
Sbjct: 165 RDEGLHCDFACLLFSHLNHPTP-------VSRIQEIIRDAVRLEEEYLSEALPVALIGMN 217

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           A    QY+QF+A+R   ++                        + NFFE RV EYQ+
Sbjct: 218 ARLMCQYIQFVADRLLMEL------------------------KSNFFEKRVGEYQK 250


>gi|213609160|ref|ZP_03368986.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-2068]
          Length = 144

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 5   RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 64

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 65  MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 105


>gi|260772919|ref|ZP_05881835.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           metschnikovii CIP 69.14]
 gi|260612058|gb|EEX37261.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           metschnikovii CIP 69.14]
          Length = 377

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++  +++       +E +Q+   +  EA   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMINLLRNGLDDFTFLQIAEECKQQCFDLFKEAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GLEP + K T NP PW++
Sbjct: 297 MIGLNRDILCQYVEYITNIRMQAVGLEPAYPKATSNPIPWIN 338


>gi|326782536|ref|YP_004323092.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM1]
 gi|310002750|gb|ADO97149.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM1]
          Length = 386

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVINQIK-IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           RDES HL    +++ + K  ++P +    KE Q     M       E  +A     +G  
Sbjct: 246 RDESQHLVITQNILRKWKEGDDPEMAVIAKEEQPFVAEMFKRTVNEEKMWADYLFKQGSM 305

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114
           +GLN      Y+++IANRR   IGL+P+F      NP PW    ++ K ++N   ET + 
Sbjct: 306 IGLNDRLLHNYVEWIANRRMKAIGLDPIFDVPAKNNPLPWTEHWLNSKGQQNAPQETEIE 365

Query: 115 EYQQGA 120
            Y  G 
Sbjct: 366 SYVVGG 371


>gi|61806080|ref|YP_214440.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM2]
 gi|61374589|gb|AAX44586.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM2]
 gi|265525292|gb|ACY76089.1| NrdB [Prochlorococcus phage P-SSM2]
          Length = 384

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 6/108 (5%)

Query: 2   RDESLHLNFGIDVINQI-KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           RDE+ HL    +++N   K ++P +    KE +Q +  M  +    E  +A      G  
Sbjct: 244 RDENQHLAITQNILNNWRKGDDPEMVEIMKEEEQWTYQMFEKCVNEEKMWAEYLFKDGSM 303

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLK 103
           +GLN     QY++++ANRR   IG++P++      NP PW    I  K
Sbjct: 304 IGLNDKLLHQYVEWVANRRMRSIGMKPVYDIAAKNNPLPWTEHWISSK 351


>gi|163748931|ref|ZP_02156182.1| ribonucleotide-diphosphate reductase beta subunit [Shewanella
           benthica KT99]
 gi|161331307|gb|EDQ02195.1| ribonucleotide-diphosphate reductase beta subunit [Shewanella
           benthica KT99]
          Length = 376

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 5/100 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    ++  ++  +++P +    +E +Q +  +  +A   E  +A      G 
Sbjct: 237 RDEALHLNSTQHILKIMRAGVDDPEMGEIAEECEQLAYDIFVKAAEQEKEWAQYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
            +GLN     QY+++I N R   + L P +    NP PWM
Sbjct: 297 MIGLNEAILCQYVEYITNERMKSVNLTPHYDEITNPLPWM 336


>gi|213646443|ref|ZP_03376496.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. J185]
 gi|289824706|ref|ZP_06544205.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
          Length = 240

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 101 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 160

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 161 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 201


>gi|326784253|ref|YP_004324793.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM5]
 gi|310003484|gb|ADO97880.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM5]
          Length = 388

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVINQIK-IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           RDES HL    +++ + K  ++P +    KE +   + M       E  +A     +G  
Sbjct: 248 RDESQHLVITQNILRKWKEGDDPEMKEIAKEEKGWVQHMFERTVNEEKVWADYLFKQGSM 307

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114
           +GLN      Y+++IANRR   IGL+P+F      NP PW    ++ K ++N   ET + 
Sbjct: 308 IGLNDRLLHNYVEWIANRRMKSIGLDPMFDIPAKNNPLPWTEHWLNSKGQQNAPQETEIE 367

Query: 115 EYQQGA 120
            Y  G 
Sbjct: 368 SYVVGG 373


>gi|71892252|ref|YP_277986.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Blochmannia pennsylvanicus str. BPEN]
 gi|71796358|gb|AAZ41109.1| ribonucleoside-diphosphate reductase 1, beta subunit [Candidatus
           Blochmannia pennsylvanicus str. BPEN]
          Length = 376

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    ++N ++   ++P +   + E QQ+S  +   A   E  +A+     G 
Sbjct: 237 RDEALHLNATQHILNLMRSGSDDPEMADISTECQQESYALFLMAAEQEKNWANYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   IGL   F    N  PW++
Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAIGLRTPFNIKSNVIPWIN 337


>gi|255026984|ref|ZP_05298970.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL J2-003]
          Length = 336

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 7/113 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++ E + +G  G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWSEEVL-QGIEGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKNFFETRV 113
                 Y+++ AN+    +G+  L+  +++N   W+    D     NF ET+ 
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYAD-----NFTETKT 327


>gi|227356095|ref|ZP_03840485.1| ribonucleoside-diphosphate reductase 1, beta subunit [Proteus
           mirabilis ATCC 29906]
 gi|227163740|gb|EEI48652.1| ribonucleoside-diphosphate reductase 1, beta subunit [Proteus
           mirabilis ATCC 29906]
          Length = 376

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E +Q+   +  EA   E  +A     +G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEQECYDLFVEAAEQEKEWAEYLFSEGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  FK   NP PW++
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLKLPFKARSNPIPWIN 337


>gi|197285594|ref|YP_002151466.1| ribonucleotide-diphosphate reductase subunit beta [Proteus
           mirabilis HI4320]
 gi|194683081|emb|CAR43612.1| ribonucleoside-diphosphate reductase 1, beta subunit [Proteus
           mirabilis HI4320]
          Length = 376

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E +Q+   +  EA   E  +A     +G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEQECYDLFVEAAEQEKEWAEYLFSEGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  FK   NP PW++
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLKLPFKARSNPIPWIN 337


>gi|320538993|ref|ZP_08038668.1| putative ribonucleoside diphosphate reductase 1, beta subunit,
           ferritin-like protein [Serratia symbiotica str. Tucson]
 gi|320030926|gb|EFW12930.1| putative ribonucleoside diphosphate reductase 1, beta subunit,
           ferritin-like protein [Serratia symbiotica str. Tucson]
          Length = 376

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGADDPEMAEIAVECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I+N R   +GLE  FK   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYISNIRMQAVGLELPFKTRSNPIPWIN 337


>gi|88859281|ref|ZP_01133921.1| ribonucleotide-diphosphate reductase beta subunit
           [Pseudoalteromonas tunicata D2]
 gi|88818298|gb|EAR28113.1| ribonucleotide-diphosphate reductase beta subunit
           [Pseudoalteromonas tunicata D2]
          Length = 376

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL+    ++N  Q   ++P +     + +++S  M   A   E  +A      G 
Sbjct: 237 RDEALHLSGTQHMLNIMQDGQDDPEMAIVAAQLREESIEMFRTAAQQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F  T NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNVRMSAVGLPQQFSITSNPIPWIN 337


>gi|15079087|ref|NP_149839.1| 376L [Invertebrate iridescent virus 6]
 gi|82012049|sp|Q91FE8|RIR2_IIV6 RecName: Full=Probable ribonucleoside-diphosphate reductase small
           subunit 376L; AltName: Full=Ribonucleotide reductase
           small subunit
 gi|15042456|gb|AAK82236.1|AF303741_377 376L [Invertebrate iridescent virus 6]
          Length = 360

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 3/65 (4%)

Query: 55  KGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFET 111
           K F GL     + Y+++IA+RR + +G + +F    Y  NP P +  +I+     NFFE 
Sbjct: 279 KDFFGLTPQRLKAYIKYIADRRLNLMGYKSIFNLEPYPTNPLPELEIMINAPTHTNFFEN 338

Query: 112 RVTEY 116
           R T+Y
Sbjct: 339 RSTDY 343


>gi|126658748|ref|ZP_01729893.1| hypothetical protein CY0110_32340 [Cyanothece sp. CCY0110]
 gi|126620010|gb|EAZ90734.1| hypothetical protein CY0110_32340 [Cyanothece sp. CCY0110]
          Length = 347

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 4/93 (4%)

Query: 37  MLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP-- 94
           + H     EI + +       +G++  S E Y +++AN R   IG+  ++   ENP+   
Sbjct: 251 LFHTTVEREIEWTNHIFDGQILGVSKASTEAYTKYLANLRLKAIGIPAIYPKIENPYAHL 310

Query: 95  -WMSEVIDLKKEKNFFETRVTEYQQGAELK-WD 125
            W       K +  FFET VT Y Q   +K WD
Sbjct: 311 DWADFKGIGKSKAAFFETEVTGYAQPTAVKGWD 343


>gi|213021870|ref|ZP_03336317.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 277

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 138 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 197

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 198 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 238


>gi|160947324|ref|ZP_02094491.1| hypothetical protein PEPMIC_01258 [Parvimonas micra ATCC 33270]
 gi|158446458|gb|EDP23453.1| hypothetical protein PEPMIC_01258 [Parvimonas micra ATCC 33270]
          Length = 349

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     ++ +++ E P L+T+E     + M+      EIA+    + +   GL 
Sbjct: 218 RDENTHLWLFKKMLLELQNEEPELFTEEKVAVYKDMIKTGVEQEIAWGKYVLGENIPGLT 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y++++ N R   +    L+  Y E P    W+SE  D    K +FFE + + Y 
Sbjct: 278 IQMVEDYIKYLGNLRSTALNFGKLYDGYDEEPESMKWVSEYSDPNAIKTDFFEAKPSAYS 337

Query: 118 QGAELKWD 125
           + + +  D
Sbjct: 338 KSSVIDDD 345


>gi|315644971|ref|ZP_07898099.1| Ribonucleoside-diphosphate reductase [Paenibacillus vortex V453]
 gi|315279682|gb|EFU42984.1| Ribonucleoside-diphosphate reductase [Paenibacillus vortex V453]
          Length = 343

 Score = 47.0 bits (110), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 5/119 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ H  F  +V  Q+  + P L ++E        +  A  LE  +AH T+     G++
Sbjct: 214 RDENQHCYFFAEVFKQLLKDFPELNSQENIDYLYRTIDRAVELETNWAHYTL-SNVRGID 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LKKEK-NFFETRVTEY 116
                 Y+++IANRR   +GLE  ++  + N  PW+    D  L   K +FFE +   Y
Sbjct: 273 LNELGDYIKYIANRRITMMGLEKAYQGVDVNCMPWIKPFSDEALNATKTDFFEAKSRNY 331


>gi|205353394|ref|YP_002227195.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|205273175|emb|CAR38137.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|326628485|gb|EGE34828.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 9]
          Length = 376

 Score = 47.0 bits (110), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|56412825|ref|YP_149900.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|197361758|ref|YP_002141394.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
 gi|56127082|gb|AAV76588.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|197093234|emb|CAR58679.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
          Length = 376

 Score = 47.0 bits (110), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|85059563|ref|YP_455265.1| ribonucleotide-diphosphate reductase subunit beta [Sodalis
           glossinidius str. 'morsitans']
 gi|84780083|dbj|BAE74860.1| ribonucleoside-diphosphate reductase 1 beta subunit [Sodalis
           glossinidius str. 'morsitans']
          Length = 376

 Score = 47.0 bits (110), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+S  +   A   E  +A      G 
Sbjct: 237 RDEALHLTSTQHMLNLMRSGEDDPEMAEIARECQQESYDLFLLAAQQEKEWASYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F    NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQSVGLDLPFATRSNPIPWIN 337


>gi|168229641|ref|ZP_02654699.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|194471700|ref|ZP_03077684.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|238913487|ref|ZP_04657324.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Tennessee str.
           CDC07-0191]
 gi|194458064|gb|EDX46903.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|205335835|gb|EDZ22599.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
          Length = 376

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|161502570|ref|YP_001569682.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. arizonae serovar 62:z4,z23:-- str.
           RSK2980]
 gi|160863917|gb|ABX20540.1| hypothetical protein SARI_00614 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 376

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMADIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|16761204|ref|NP_456821.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. CT18]
 gi|29141101|ref|NP_804443.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|25285831|pir||AD0791 ribonucleoside-diphosphate reductase (EC 1.17.4.1) - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16503503|emb|CAD07510.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Typhi]
 gi|29136727|gb|AAO68292.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
          Length = 376

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|16765605|ref|NP_461220.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|62180851|ref|YP_217268.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161613001|ref|YP_001586966.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Paratyphi B str. SPB7]
 gi|167549728|ref|ZP_02343487.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|167992612|ref|ZP_02573709.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|168237293|ref|ZP_02662351.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|168242393|ref|ZP_02667325.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168261709|ref|ZP_02683682.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|168466025|ref|ZP_02699895.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|168817991|ref|ZP_02829991.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|194442577|ref|YP_002041539.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194449379|ref|YP_002046332.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194735273|ref|YP_002115349.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197247637|ref|YP_002147234.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197262505|ref|ZP_03162579.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|198242288|ref|YP_002216347.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|200387602|ref|ZP_03214214.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204929071|ref|ZP_03220214.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|207857697|ref|YP_002244348.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|213161593|ref|ZP_03347303.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|224583238|ref|YP_002637036.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|1172945|sp|P37427|RIR2_SALTY RecName: Full=Ribonucleoside-diphosphate reductase 1 subunit beta;
           AltName: Full=Protein B2; AltName: Full=Protein R2;
           AltName: Full=Ribonucleotide reductase 1
 gi|510349|emb|CAA51453.1| nrdB [Salmonella enterica subsp. enterica serovar Typhimurium]
 gi|16420817|gb|AAL21179.1| ribonucleoside-diphosphate reductase 1, beta subunit [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|62128484|gb|AAX66187.1| ribonucleoside-diphosphate reductase 1, beta subunit [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161362365|gb|ABX66133.1| hypothetical protein SPAB_00707 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401240|gb|ACF61462.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194407683|gb|ACF67902.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194710775|gb|ACF89996.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|195631367|gb|EDX49927.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|197211340|gb|ACH48737.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197240760|gb|EDY23380.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197289678|gb|EDY29041.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|197936804|gb|ACH74137.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|199604700|gb|EDZ03245.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204321615|gb|EDZ06814.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205325266|gb|EDZ13105.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205329222|gb|EDZ15986.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|205338588|gb|EDZ25352.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|205344845|gb|EDZ31609.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|205349363|gb|EDZ35994.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|206709500|emb|CAR33844.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|224467765|gb|ACN45595.1| ribonucleotide-diphosphate reductase beta subunit [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|261247486|emb|CBG25313.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267994368|gb|ACY89253.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           14028S]
 gi|301158836|emb|CBW18349.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
 gi|312913268|dbj|BAJ37242.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|320086715|emb|CBY96487.1| ribonucleoside diphosphage reductase 1, beta subunit, B2
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
 gi|321223022|gb|EFX48093.1| Ribonucleotide reductase of class Ia aerobic, beta subunit
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
 gi|322617030|gb|EFY13936.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315996572]
 gi|322617664|gb|EFY14563.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-1]
 gi|322624706|gb|EFY21535.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-3]
 gi|322630255|gb|EFY27025.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-4]
 gi|322634436|gb|EFY31169.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-1]
 gi|322639146|gb|EFY35838.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-2]
 gi|322640143|gb|EFY36809.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 531954]
 gi|322645769|gb|EFY42293.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322651544|gb|EFY47919.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           OH_2009072675]
 gi|322656105|gb|EFY52404.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322659457|gb|EFY55704.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 19N]
 gi|322665919|gb|EFY62102.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           81038-01]
 gi|322669843|gb|EFY65984.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MD_MDA09249507]
 gi|322673828|gb|EFY69925.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 414877]
 gi|322678586|gb|EFY74642.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 366867]
 gi|322683618|gb|EFY79632.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 413180]
 gi|322687694|gb|EFY83664.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 446600]
 gi|322715327|gb|EFZ06898.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Choleraesuis str. A50]
 gi|323130608|gb|ADX18038.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str. 4/74]
 gi|323196209|gb|EFZ81366.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           609458-1]
 gi|323198377|gb|EFZ83479.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           556150-1]
 gi|323204185|gb|EFZ89196.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 609460]
 gi|323208571|gb|EFZ93510.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           507440-20]
 gi|323212337|gb|EFZ97160.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 556152]
 gi|323218256|gb|EGA02966.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB101509-0077]
 gi|323222986|gb|EGA07335.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB102109-0047]
 gi|323227421|gb|EGA11586.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB110209-0055]
 gi|323232251|gb|EGA16354.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB111609-0052]
 gi|323235716|gb|EGA19800.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009083312]
 gi|323241124|gb|EGA25160.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009085258]
 gi|323244866|gb|EGA28868.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315731156]
 gi|323248577|gb|EGA32508.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2009159199]
 gi|323251597|gb|EGA35465.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008282]
 gi|323255474|gb|EGA39237.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008283]
 gi|323263076|gb|EGA46622.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008284]
 gi|323268136|gb|EGA51613.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008285]
 gi|323270771|gb|EGA54209.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008287]
 gi|326624097|gb|EGE30442.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
 gi|332989211|gb|AEF08194.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str. UK-1]
          Length = 376

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|153819185|ref|ZP_01971852.1| ribonucleoside-diphosphate reductase 1 subunit beta [Vibrio
           cholerae NCTC 8457]
 gi|126510271|gb|EAZ72865.1| ribonucleoside-diphosphate reductase 1 subunit beta [Vibrio
           cholerae NCTC 8457]
          Length = 171

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++            +E +Q+S  +  EA   E  +A      G 
Sbjct: 31  RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAEYLFKDGS 90

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GLEP +   T NP PW++
Sbjct: 91  MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWIN 132


>gi|170726650|ref|YP_001760676.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           woodyi ATCC 51908]
 gi|169811997|gb|ACA86581.1| Ribonucleoside-diphosphate reductase [Shewanella woodyi ATCC 51908]
          Length = 376

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 5/100 (5%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +I   Q   ++P +    KE +Q++  +  +A   E  +A      G 
Sbjct: 237 RDEALHLNSTQHIIKLMQAGKDDPEMGEIAKECEQQAYDIFVKAAEQEKEWARYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
            +GLN     QY+++I N R   + L+  +    NP PWM
Sbjct: 297 MIGLNEQILCQYVEYITNERMKSVNLDLPYAQITNPLPWM 336


>gi|327312835|ref|YP_004328272.1| ribonucleoside-diphosphate reductase subunit beta [Prevotella
           denticola F0289]
 gi|326946303|gb|AEA22188.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           denticola F0289]
          Length = 348

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 8/127 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I ++K E P ++T +  +    M+ E    EIA+    +     GLN
Sbjct: 220 RDENTHLWLFRSIILELKKEEPDMFTSDKIKVYEDMMREGVRQEIAWGQYVIGNDVQGLN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKKEK-NFFETRVTE 115
                 Y++++ N R   +G    F Y +N        W+ +  +    K +FFE + T 
Sbjct: 280 EQMVSDYIRYLGNLRWSGLGFG--FLYDDNRKEPENMKWVGQYSNANMVKTDFFEAKSTA 337

Query: 116 YQQGAEL 122
           Y +   L
Sbjct: 338 YAKSTAL 344


>gi|325268390|ref|ZP_08135022.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella
           multiformis DSM 16608]
 gi|324989244|gb|EGC21195.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella
           multiformis DSM 16608]
          Length = 348

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 8/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I ++K E P ++T +  +    M+ E    EIA+    +     GLN
Sbjct: 220 RDENTHLWLFRSIILELKKEEPDMFTPDRIKVYEDMMREGVRQEIAWGQYVIGNDVQGLN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKKEK-NFFETRVTE 115
                 Y++++ N R   +G    F Y +N        W+ +  +    K +FFE + T 
Sbjct: 280 EQMVSDYIRYLGNLRWSGLGFG--FLYDDNRKEPENMKWVGQYSNANMVKTDFFEAKSTA 337

Query: 116 YQQGAELKWD 125
           Y +   L  D
Sbjct: 338 YAKSTALADD 347


>gi|157375444|ref|YP_001474044.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           sediminis HAW-EB3]
 gi|157317818|gb|ABV36916.1| Ribonucleoside-diphosphate reductase [Shewanella sediminis HAW-EB3]
          Length = 376

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 7/102 (6%)

Query: 2   RDESLHLNFGIDVINQI---KIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
           RDE+LHL+ G   I ++     ++P +    +E ++  R +  +    E  +A      G
Sbjct: 237 RDEALHLS-GTQHILKLWANGNDDPEMVEVCQELREAGRQVFLDVVEQEKEWADYLFKDG 295

Query: 57  -FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
             +GLNA   +QY+++I+N R   IG E  F    NP PW++
Sbjct: 296 SMIGLNAEILKQYIEYISNNRMEAIGYEAPFAIKNNPLPWIN 337


>gi|90409249|ref|ZP_01217354.1| ribonucleotide-diphosphate reductase beta subunit [Psychromonas sp.
           CNPT3]
 gi|90309647|gb|EAS37827.1| ribonucleotide-diphosphate reductase beta subunit [Psychromonas sp.
           CNPT3]
          Length = 381

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    ++N      ++P +     E   K R +   A   E  +A      G 
Sbjct: 242 RDEALHLNSTQQILNIWADGKDDPEMAEIAIECHAKGRDIFLTAAAQEKEWAAYLFKDGS 301

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I+N R   IG E  F+   NP PW++
Sbjct: 302 MIGLNEVILCQYVEYISNVRMQAIGYEAPFEIKNNPIPWIN 342


>gi|327394563|dbj|BAK11985.1| ribonucleoside-diphosphate reductase 1 beta subunit NrdB [Pantoea
           ananatis AJ13355]
          Length = 376

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT----MLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++        KE   + R     +  +A L E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRTGEDDPEMKEIAAECREECFELFKKAALQEKEWAEYLFSGGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLDLPFETRSNPIPWIN 337


>gi|94499220|ref|ZP_01305758.1| ribonucleotide-diphosphate reductase beta subunit [Oceanobacter sp.
           RED65]
 gi|94428852|gb|EAT13824.1| ribonucleotide-diphosphate reductase beta subunit [Oceanobacter sp.
           RED65]
          Length = 376

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 7/102 (6%)

Query: 2   RDESLHLNFGIDVINQI---KIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
           RDE+LHL  G   + QI     ++P +     E +++   +  EA   E  +A      G
Sbjct: 237 RDEALHLT-GTQHMMQIWALGKDDPEMGEIANECKKQVIEIFREAAQQEKDWAEYLFKDG 295

Query: 57  -FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
             +GLN     QY+++I N+R   IGL+ +F+  +NP PW++
Sbjct: 296 SMIGLNKDILCQYVEYITNQRLGAIGLDNIFETRQNPIPWIN 337


>gi|229505158|ref|ZP_04394668.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae BX 330286]
 gi|229511170|ref|ZP_04400649.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae B33]
 gi|229515628|ref|ZP_04405087.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae TMA 21]
 gi|229518289|ref|ZP_04407733.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae RC9]
 gi|229521368|ref|ZP_04410787.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae TM 11079-80]
 gi|229525854|ref|ZP_04415259.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae bv. albensis VL426]
 gi|229529665|ref|ZP_04419055.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae 12129(1)]
 gi|229608178|ref|YP_002878826.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio cholerae
           MJ-1236]
 gi|229333439|gb|EEN98925.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae 12129(1)]
 gi|229339435|gb|EEO04452.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae bv. albensis VL426]
 gi|229341466|gb|EEO06469.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae TM 11079-80]
 gi|229345004|gb|EEO09978.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae RC9]
 gi|229347397|gb|EEO12357.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae TMA 21]
 gi|229351135|gb|EEO16076.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae B33]
 gi|229357381|gb|EEO22298.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae BX 330286]
 gi|229370833|gb|ACQ61256.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae MJ-1236]
          Length = 381

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++            +E +Q+S  +  EA   E  +A      G 
Sbjct: 241 RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAEYLFKDGS 300

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GLEP +   T NP PW++
Sbjct: 301 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWIN 342


>gi|291618170|ref|YP_003520912.1| NrdB [Pantoea ananatis LMG 20103]
 gi|291153200|gb|ADD77784.1| NrdB [Pantoea ananatis LMG 20103]
          Length = 387

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT----MLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++        KE   + R     +  +A L E  +A      G 
Sbjct: 248 RDEALHLTGTQHMLNLLRTGEDDPEMKEIAAECREECFELFKKAALQEKEWAEYLFSGGS 307

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 308 MIGLNKDILCQYIEYITNIRMQAVGLDLPFETRSNPIPWIN 348


>gi|121590730|ref|ZP_01678061.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           2740-80]
 gi|147674333|ref|YP_001216820.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio cholerae
           O395]
 gi|153212320|ref|ZP_01948108.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           1587]
 gi|153801907|ref|ZP_01956493.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MZO-3]
 gi|153823603|ref|ZP_01976270.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           B33]
 gi|153827294|ref|ZP_01979961.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MZO-2]
 gi|153829732|ref|ZP_01982399.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           623-39]
 gi|227081427|ref|YP_002809978.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           M66-2]
 gi|254291706|ref|ZP_04962493.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           AM-19226]
 gi|254848379|ref|ZP_05237729.1| ribonucleoside-diphosphate reductase [Vibrio cholerae MO10]
 gi|297578847|ref|ZP_06940775.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio cholerae
           RC385]
 gi|298498653|ref|ZP_07008460.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MAK 757]
 gi|9655738|gb|AAF94414.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           O1 biovar El Tor str. N16961]
 gi|121547411|gb|EAX57522.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           2740-80]
 gi|124116698|gb|EAY35518.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           1587]
 gi|124122552|gb|EAY41295.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MZO-3]
 gi|126518882|gb|EAZ76105.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           B33]
 gi|146316216|gb|ABQ20755.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           O395]
 gi|148874766|gb|EDL72901.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           623-39]
 gi|149738785|gb|EDM53127.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MZO-2]
 gi|150422390|gb|EDN14350.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           AM-19226]
 gi|227009315|gb|ACP05527.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           M66-2]
 gi|227013172|gb|ACP09382.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           O395]
 gi|254844084|gb|EET22498.1| ribonucleoside-diphosphate reductase [Vibrio cholerae MO10]
 gi|297536441|gb|EFH75274.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio cholerae
           RC385]
 gi|297542986|gb|EFH79036.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MAK 757]
          Length = 389

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++            +E +Q+S  +  EA   E  +A      G 
Sbjct: 249 RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAEYLFKDGS 308

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GLEP +   T NP PW++
Sbjct: 309 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWIN 350


>gi|161582009|ref|NP_230900.2| ribonucleotide-diphosphate reductase subunit beta [Vibrio cholerae
           O1 biovar El Tor str. N16961]
 gi|255745652|ref|ZP_05419600.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholera CIRS 101]
 gi|262159072|ref|ZP_06030184.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae INDRE 91/1]
 gi|262169430|ref|ZP_06037122.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae RC27]
 gi|262191406|ref|ZP_06049594.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae CT 5369-93]
 gi|255736727|gb|EET92124.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholera CIRS 101]
 gi|262022243|gb|EEY40952.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae RC27]
 gi|262029257|gb|EEY47909.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae INDRE 91/1]
 gi|262032695|gb|EEY51245.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae CT 5369-93]
 gi|327483944|gb|AEA78351.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Vibrio cholerae LMA3894-4]
          Length = 377

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++            +E +Q+S  +  EA   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GLEP +   T NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWIN 338


>gi|322832009|ref|YP_004212036.1| Ribonucleoside-diphosphate reductase [Rahnella sp. Y9602]
 gi|321167210|gb|ADW72909.1| Ribonucleoside-diphosphate reductase [Rahnella sp. Y9602]
          Length = 376

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL      +N ++   ++P +     E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHALNLLRSGQDDPEMAEIALECQQECHDLFVLAAQQEKDWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  FK   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDAPFKTRSNPIPWIN 337


>gi|325859841|ref|ZP_08172971.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           denticola CRIS 18C-A]
 gi|325482767|gb|EGC85770.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           denticola CRIS 18C-A]
          Length = 348

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 8/127 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I ++K E P ++T +  +    M+ E    EIA+    +     GLN
Sbjct: 220 RDENTHLWLFRSIILELKKEEPDMFTPDRIKVYEDMMREGVRQEIAWGQYVIGNDVQGLN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKKEK-NFFETRVTE 115
                 Y++++ N R   +G    F Y +N        W+ +  +    K +FFE + T 
Sbjct: 280 EQMVSDYIRYLGNLRWSGLGFG--FLYDDNRKEPENMKWVGQYSNANMVKTDFFEAKSTA 337

Query: 116 YQQGAEL 122
           Y +   L
Sbjct: 338 YAKSTAL 344


>gi|323337480|gb|EGA78728.1| Rnr4p [Saccharomyces cerevisiae Vin13]
          Length = 328

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 2/99 (2%)

Query: 24  HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE 83
           HL TK   +    ++ EA  +E  Y   ++P    G++  S   Y++F+A+      G E
Sbjct: 216 HLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMDLKSIHTYIEFVADGLLQGFGNE 275

Query: 84  PLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122
             +    NPF +M +V    K   FFE +V++YQ+ +++
Sbjct: 276 KYYNAV-NPFEFMEDVATAGK-TTFFEKKVSDYQKASDM 312


>gi|160915703|ref|ZP_02077911.1| hypothetical protein EUBDOL_01712 [Eubacterium dolichum DSM 3991]
 gi|158432179|gb|EDP10468.1| hypothetical protein EUBDOL_01712 [Eubacterium dolichum DSM 3991]
          Length = 353

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     ++ ++K E P L+T E  +  + ML      E+ +A   + +   GL 
Sbjct: 225 RDENTHLWLFRSILLELKKEEPQLFTPEHIEIYKGMLKHGVEEEVKWAEYVLGERMEGLT 284

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y+ ++ N R + +G   L+  Y + P    W+S   +    K +FFE + T Y 
Sbjct: 285 MEMVADYIHYLGNLRSNALGFGSLYDGYEKEPASMEWVSMYSNANIIKTDFFEAKSTAYA 344

Query: 118 QGAEL 122
           + + L
Sbjct: 345 KSSAL 349


>gi|207345015|gb|EDZ71971.1| YGR180Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 224

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 2/99 (2%)

Query: 24  HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE 83
           HL TK   +    ++ EA  +E  Y   ++P    G++  S   Y++F+A+      G E
Sbjct: 112 HLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMDLKSIHTYIEFVADGLLQGFGNE 171

Query: 84  PLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122
             +    NPF +M +V    K   FFE +V++YQ+ +++
Sbjct: 172 KYYNAV-NPFEFMEDVATAGK-TTFFEKKVSDYQKASDM 208


>gi|222475861|ref|YP_002564382.1| ribonucleotide reductase [Halorubrum lacusprofundi ATCC 49239]
 gi|222454232|gb|ACM58496.1| ribonucleotide reductase [Halorubrum lacusprofundi ATCC 49239]
          Length = 336

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 59/121 (48%), Gaps = 4/121 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60
           ++E +H  FG+++++ I+ ENP L+  EF+ + R     A   E+        +G +  L
Sbjct: 205 KEEQIHGLFGVELVDTIREENPGLFDDEFEAEIREACRRAYEAEMGMLDWIFGEGELQFL 264

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
                 ++++   N+    +G+ P+F+  ++      W  E I + K+ +FF  R T Y 
Sbjct: 265 PREYVNEFLKDRFNQSLENVGVYPMFETDDDLLDETRWFDEDIMMTKDNDFFSKRSTTYN 324

Query: 118 Q 118
           +
Sbjct: 325 K 325


>gi|52425023|ref|YP_088160.1| ribonucleotide-diphosphate reductase subunit beta [Mannheimia
           succiniciproducens MBEL55E]
 gi|52307075|gb|AAU37575.1| NrdF protein [Mannheimia succiniciproducens MBEL55E]
          Length = 376

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E A+A      G 
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQEKAWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWIN 337


>gi|6321619|ref|NP_011696.1| Rnr4p [Saccharomyces cerevisiae S288c]
 gi|1710402|sp|P49723|RIR4_YEAST RecName: Full=Ribonucleoside-diphosphate reductase small chain 2;
           AltName: Full=Ribonucleotide reductase R2 subunit 2;
           AltName: Full=Ribonucleotide reductase small subunit 2
 gi|15826570|pdb|1JK0|B Chain B, Ribonucleotide Reductase Y2y4 Heterodimer
 gi|52695527|pdb|1SMS|A Chain A, Structure Of The Ribonucleotide Reductase Rnr4 Homodimer
           From Saccharomyces Cerevisiae
 gi|52695528|pdb|1SMS|B Chain B, Structure Of The Ribonucleotide Reductase Rnr4 Homodimer
           From Saccharomyces Cerevisiae
 gi|915546|gb|AAB72236.1| Rnr4p [Saccharomyces cerevisiae]
 gi|1323319|emb|CAA97206.1| RNR4 [Saccharomyces cerevisiae]
 gi|285812375|tpg|DAA08275.1| TPA: Rnr4p [Saccharomyces cerevisiae S288c]
 gi|323304781|gb|EGA58540.1| Rnr4p [Saccharomyces cerevisiae FostersB]
 gi|323308943|gb|EGA62174.1| Rnr4p [Saccharomyces cerevisiae FostersO]
          Length = 345

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 2/99 (2%)

Query: 24  HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE 83
           HL TK   +    ++ EA  +E  Y   ++P    G++  S   Y++F+A+      G E
Sbjct: 233 HLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMDLKSIHTYIEFVADGLLQGFGNE 292

Query: 84  PLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122
             +    NPF +M +V    K   FFE +V++YQ+ +++
Sbjct: 293 KYYNAV-NPFEFMEDVATAGK-TTFFEKKVSDYQKASDM 329


>gi|37526941|ref|NP_930285.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|36786374|emb|CAE15427.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotide
           reductase 1) (B2 protein) (R2 protein) [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 376

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    KE +Q+   +  +A   E  +A     +G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAKECEQQCYDLFVQAAEQEKEWADYLFSEGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLKLPFETRSNPIPWIN 337


>gi|51830370|gb|AAU09736.1| YGR180C [Saccharomyces cerevisiae]
          Length = 345

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 2/99 (2%)

Query: 24  HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE 83
           HL TK   +    ++ EA  +E  Y   ++P    G++  S   Y++F+A+      G E
Sbjct: 233 HLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMDLKSIHTYIEFVADGLLQGFGNE 292

Query: 84  PLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122
             +    NPF +M +V    K   FFE +V++YQ+ +++
Sbjct: 293 KYYNAV-NPFEFMEDVATAGK-TTFFEKKVSDYQKASDM 329


>gi|151943458|gb|EDN61769.1| ribonucleotide reductase [Saccharomyces cerevisiae YJM789]
 gi|190406805|gb|EDV10072.1| ribonucleotide reductase [Saccharomyces cerevisiae RM11-1a]
 gi|256270921|gb|EEU06048.1| Rnr4p [Saccharomyces cerevisiae JAY291]
 gi|259146684|emb|CAY79941.1| Rnr4p [Saccharomyces cerevisiae EC1118]
 gi|323333575|gb|EGA74969.1| Rnr4p [Saccharomyces cerevisiae AWRI796]
 gi|323348450|gb|EGA82695.1| Rnr4p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 345

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 2/99 (2%)

Query: 24  HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE 83
           HL TK   +    ++ EA  +E  Y   ++P    G++  S   Y++F+A+      G E
Sbjct: 233 HLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMDLKSIHTYIEFVADGLLQGFGNE 292

Query: 84  PLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122
             +    NPF +M +V    K   FFE +V++YQ+ +++
Sbjct: 293 KYYNAV-NPFEFMEDVATAGK-TTFFEKKVSDYQKASDM 329


>gi|18656506|gb|AAL77807.1|AF389451_14 ribonucleoside-diphosphate reductase beta subunit [Tiger frog
           virus]
          Length = 387

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 10/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEF-----QQKSRTMLHEATLLEIAYAHETMPK 55
           +RDE++H+     +   +  E P + TK+      +   R    E   +++A+  E  P 
Sbjct: 252 VRDENIHVEGVSKLFETLNSEYPWVVTKDIIELFKEDAERVAELEEAFVDLAF-QECGP- 309

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDLKKEKNFFETRV 113
               L     + Y+ ++ N R   +GL  L +      P PW+  +ID     NFFE  V
Sbjct: 310 -VCELEPKQVKDYVLYVINLRAANMGLPKLIERAPEACPIPWVKWLIDGADLTNFFENHV 368

Query: 114 TEYQQGA 120
           TEY+ G 
Sbjct: 369 TEYETGG 375


>gi|319760602|ref|YP_004124540.1| ribonucleoside-diphosphate reductase 1 subunit beta [Candidatus
           Blochmannia vafer str. BVAF]
 gi|318039316|gb|ADV33866.1| ribonucleoside-diphosphate reductase 1 subunit beta [Candidatus
           Blochmannia vafer str. BVAF]
          Length = 376

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 5/102 (4%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDESLHL+    ++N  Q   ++P +   +  +Q +S  +   A   E  +AH     G 
Sbjct: 237 RDESLHLSATQHILNLMQSGADDPEMAEISLMYQSESYNLFLMAAEQEKMWAHYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE 98
            +GLN     QY+++I N R   IGL+  F    N  PW++ 
Sbjct: 297 MIGLNKEILCQYIEYITNIRMQAIGLKAPFHIKANVIPWINS 338


>gi|225734460|gb|ACO25228.1| hypothetical protein [Epizootic haematopoietic necrosis virus]
          Length = 387

 Score = 46.2 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 10/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEF-----QQKSRTMLHEATLLEIAYAHETMPK 55
           +RDE++H+     +   +  E P +  ++      +   R    E   +++A+  E  P 
Sbjct: 252 VRDENMHVEGVSKLFETLNSEYPWVVNEDLIELFKEDAERVAELEEAFVDLAF-QECGP- 309

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDLKKEKNFFETRV 113
              GL     + Y+ ++ N R   +GL  L +      P PW+  +ID     NFFE  V
Sbjct: 310 -VCGLEPKQVKDYVLYVINLRASNMGLPRLIERAPEACPIPWVKWLIDGADLTNFFENHV 368

Query: 114 TEYQQGA 120
           TEY+ G 
Sbjct: 369 TEYETGG 375


>gi|12642668|gb|AAK00340.1| ribonucleotide reductase small subunit [Bovine herpesvirus 2]
          Length = 313

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 7/118 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N     +P    K    + R +  EA  +EIA+    MP+    L+
Sbjct: 192 RDEAVHTTASCCIYNNYIGAHP----KPPPTRVRQLFLEAVDIEIAFIRAKMPRDGQVLS 247

Query: 62  ---APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                S E Y++F A+R    IG +PLF        +   ++   K  NFFE R T Y
Sbjct: 248 ESAVASIENYVRFSADRLLCLIGDQPLFNAPPPDANFPLRLMSTDKHTNFFECRSTAY 305


>gi|163803511|ref|ZP_02197381.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp. AND4]
 gi|159172687|gb|EDP57538.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp. AND4]
          Length = 377

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDESLHLN    +IN ++            +E +Q+   +  EA   E  +A      G 
Sbjct: 237 RDESLHLNGTQHMINLLRNGQDDFIFMQIAEEVKQECFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   + + T NP PW++
Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPKAYPEATTNPIPWIN 338


>gi|152979144|ref|YP_001344773.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           succinogenes 130Z]
 gi|150840867|gb|ABR74838.1| Ribonucleoside-diphosphate reductase [Actinobacillus succinogenes
           130Z]
          Length = 376

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E A+A      G 
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFEARSNPIPWIN 337


>gi|308187586|ref|YP_003931717.1| ribonucleoside-diphosphate reductase 1 beta chain [Pantoea vagans
           C9-1]
 gi|308058096|gb|ADO10268.1| ribonucleoside-diphosphate reductase 1 beta chain [Pantoea vagans
           C9-1]
          Length = 376

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT----MLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++        KE   + R     +  +A L E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGEDDPEMKEIAAECREECFELFKKAALQEKEWAEYLFSGGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|221316490|ref|ZP_03598295.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. NCIB 3610]
          Length = 347

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 6/129 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F   ++  I  + P L T+EF +       E   LE  +  E + K    ++
Sbjct: 218 RDEMKHSYFQTILVRDILTQYPELNTEEFSEFVYDFFTELVQLEREFC-EDLYKNTPDID 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS--EVIDLKKEK-NFFETRVTEYQQ 118
               ++Y+ + AN     +GL+ +F   +NP PW++  +  +L   K +FFE +   Y +
Sbjct: 277 IEEVKEYIGYRANLILDNLGLDQIFSAKKNPMPWITAFDPDNLNNTKRDFFEDKEVNYGK 336

Query: 119 GAELK--WD 125
             E K  WD
Sbjct: 337 ANEQKNDWD 345


>gi|304398198|ref|ZP_07380072.1| ribonucleotide reductase [Pantoea sp. aB]
 gi|304354064|gb|EFM18437.1| ribonucleotide reductase [Pantoea sp. aB]
          Length = 376

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT----MLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++        KE   + R     +  +A L E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGEDDPEMKEIAAECREECFELFKKAALQEKEWAEYLFSGGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|148825799|ref|YP_001290552.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae PittEE]
 gi|148715959|gb|ABQ98169.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae PittEE]
          Length = 376

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E A+A      G 
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWIN 337


>gi|76803441|ref|YP_327710.1| ribonucleoside-diphosphate reductase, beta subunit 1 [Natronomonas
           pharaonis DSM 2160]
 gi|76559256|emb|CAI50863.1| ribonucleoside-diphosphate reductase, beta subunit 1 [Natronomonas
           pharaonis DSM 2160]
          Length = 336

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/124 (23%), Positives = 62/124 (50%), Gaps = 4/124 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60
           ++E +H  FG++++  I+ ENP L+ ++F+++ +     A   E+        +G +  L
Sbjct: 205 KEEQIHGLFGVELVETIREENPDLFDEDFEEEVQAACQRAFEAEMKILDWIFGEGELEFL 264

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
                + +++   N+    +G+EP+F+  +       W  E I + K+ +FF  R T Y 
Sbjct: 265 PRTHVDAFLRDRFNQSLENVGVEPIFEPDDGLLEETRWFDEDIMMTKDNDFFSKRSTTYN 324

Query: 118 QGAE 121
           + A+
Sbjct: 325 KHAQ 328


>gi|145633337|ref|ZP_01789068.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           influenzae 3655]
 gi|144986183|gb|EDJ92773.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           influenzae 3655]
          Length = 376

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E A+A      G 
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWIN 337


>gi|16273547|ref|NP_439802.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae Rd KW20]
 gi|68250262|ref|YP_249374.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 86-028NP]
 gi|145629252|ref|ZP_01785051.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 22.1-21]
 gi|145631490|ref|ZP_01787259.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae R3021]
 gi|145639184|ref|ZP_01794791.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae PittII]
 gi|145641092|ref|ZP_01796673.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae R3021]
 gi|260581255|ref|ZP_05849073.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus
           influenzae RdAW]
 gi|260582634|ref|ZP_05850423.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus
           influenzae NT127]
 gi|319776092|ref|YP_004138580.1| ribonucleoside-diphosphate reductase subunit beta [Haemophilus
           influenzae F3047]
 gi|319896901|ref|YP_004135096.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus
           influenzae F3031]
 gi|329123256|ref|ZP_08251824.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           aegyptius ATCC 11116]
 gi|1172943|sp|P43755|RIR2_HAEIN RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|1574510|gb|AAC23306.1| ribonucleoside diphosphate reductase, beta chain (nrdB)
           [Haemophilus influenzae Rd KW20]
 gi|68058461|gb|AAX88714.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus
           influenzae 86-028NP]
 gi|144978755|gb|EDJ88478.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 22.1-21]
 gi|144982920|gb|EDJ90433.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae R3021]
 gi|145271746|gb|EDK11656.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae PittII]
 gi|145274253|gb|EDK14118.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 22.4-21]
 gi|260092082|gb|EEW76027.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus
           influenzae RdAW]
 gi|260094306|gb|EEW78205.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus
           influenzae NT127]
 gi|301170418|emb|CBW30024.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Haemophilus influenzae 10810]
 gi|309750762|gb|ADO80746.1| Ribonucleoside diphosphate reductase 1, beta subunit [Haemophilus
           influenzae R2866]
 gi|309972945|gb|ADO96146.1| Ribonucleoside diphosphate reductase 1, beta subunit [Haemophilus
           influenzae R2846]
 gi|317432405|emb|CBY80760.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus
           influenzae F3031]
 gi|317450683|emb|CBY86903.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus
           influenzae F3047]
 gi|327471465|gb|EGF16913.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           aegyptius ATCC 11116]
          Length = 376

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E A+A      G 
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWIN 337


>gi|262402402|ref|ZP_06078963.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           sp. RC586]
 gi|262351184|gb|EEZ00317.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           sp. RC586]
          Length = 360

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++            +E +Q+S  +  EA   E  +A      G 
Sbjct: 220 RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAAYLFKDGS 279

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GLEP +   T NP PW++
Sbjct: 280 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPTATTNPIPWIN 321


>gi|289664735|ref|ZP_06486316.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. vasculorum NCPPB702]
          Length = 349

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  EN  L   E           A  LE  +  E +  G  G++
Sbjct: 221 RDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETVWTAEVL-DGIDGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L++   +N  PW+    D   + + +FFE R   Y++
Sbjct: 280 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 339


>gi|120598753|ref|YP_963327.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp.
           W3-18-1]
 gi|146293170|ref|YP_001183594.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           putrefaciens CN-32]
 gi|120558846|gb|ABM24773.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella sp. W3-18-1]
 gi|145564860|gb|ABP75795.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella putrefaciens CN-32]
 gi|319426318|gb|ADV54392.1| ribonucleotide reductase [Shewanella putrefaciens 200]
          Length = 376

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 5/100 (5%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    ++N  Q   ++P +     + QQ++  +  +A   E  +A      G 
Sbjct: 237 RDEALHLNSTQHILNIMQGGKDDPEMGEIAAQCQQEAYDLFLKAAEQEKEWAKYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
            +GLN     QY++FI N+R   + L   +  + NP PWM
Sbjct: 297 MIGLNEQILCQYVEFITNQRMKSVNLPQPYPESTNPLPWM 336


>gi|326784480|ref|YP_004325029.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM7]
 gi|310004513|gb|ADO98905.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM7]
          Length = 388

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 24/135 (17%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTK------------EFQQKSRTMLHEATLLEIAYA 49
           RDES HL     V+ Q  ++N   WT+            E Q+    M       E A+A
Sbjct: 247 RDESQHL-----VLTQQILKN---WTEGKDDPEMKEIAEEEQETVEQMFKACVDEEKAWA 298

Query: 50  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK--YTENPFPWMSEVIDLKKEK 106
           +    +G  +GLN      Y+++IANRR   IGL+P++      NP PW    ++ K ++
Sbjct: 299 NYLFKEGSMIGLNERLLHNYVEWIANRRMKAIGLKPIYDQPLRNNPLPWTEHWLNSKGQQ 358

Query: 107 NF-FETRVTEYQQGA 120
           N   ET +  Y  G 
Sbjct: 359 NAPQETEIESYVVGG 373


>gi|78049716|ref|YP_365891.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
 gi|78038146|emb|CAJ25891.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
          Length = 347

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  EN  L   E           A  LE  +  E +  G  G++
Sbjct: 219 RDELAHTKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L++   +N  PW+    D   + + +FFE R   Y++
Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337


>gi|261211025|ref|ZP_05925315.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           sp. RC341]
 gi|260840000|gb|EEX66600.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           sp. RC341]
          Length = 360

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++            +E +Q+S  +  EA   E  +A      G 
Sbjct: 220 RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAAYLFKDGS 279

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GLEP +   T NP PW++
Sbjct: 280 MIGLNRDILCQYVEYITNIRMQAVGLEPAYPTATTNPIPWIN 321


>gi|113970253|ref|YP_734046.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp.
           MR-4]
 gi|114047558|ref|YP_738108.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp.
           MR-7]
 gi|113884937|gb|ABI38989.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella sp. MR-4]
 gi|113889000|gb|ABI43051.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella sp. MR-7]
          Length = 376

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 5/100 (5%)

Query: 2   RDESLHLNFG--IDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    I  I Q   ++P +     E QQ++  +  +A   E  +A      G 
Sbjct: 237 RDEALHLNSTQHILTIMQAGKDDPEMGEIAAECQQEAYNLFLKAAEQEKEWAKYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
            +GLN     QY+++I N+R   + L   +    NP PWM
Sbjct: 297 MIGLNEQILCQYVEYITNQRMKSVNLPQPYAEQSNPLPWM 336


>gi|238021387|ref|ZP_04601813.1| hypothetical protein GCWU000324_01286 [Kingella oralis ATCC 51147]
 gi|237868367|gb|EEP69373.1| hypothetical protein GCWU000324_01286 [Kingella oralis ATCC 51147]
          Length = 384

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 8/103 (7%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLWTK---EFQQKSRTMLHEATLLEIAYAHETMPKG 56
           RDE+LHL     ++N ++   E    W +   E Q +   +  +A   E  +A      G
Sbjct: 244 RDEALHLTSTQHMLNLMRGGAEGAE-WAEIAAELQNECFELFKKAAEQEKEWAEYLFKDG 302

Query: 57  -FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
             +GLN     QY+++I N R   +GL+P F K T+NP PW++
Sbjct: 303 SMIGLNKDILCQYVEYITNARMLAVGLQPAFEKATQNPIPWIN 345


>gi|332292139|ref|YP_004430748.1| ATP-cone domain protein [Krokinobacter diaphorus 4H-3-7-5]
 gi|332170225|gb|AEE19480.1| ATP-cone domain protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 425

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 58/131 (44%), Gaps = 18/131 (13%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE------IAYAHET--M 53
           ++E +H +FGID+I  IK ENP  +  E     + M  EA   E      I  A E   +
Sbjct: 294 KEEQIHGDFGIDIIKIIKAENPEWFDAEHSATVQEMCKEAFKAESNIVDWIFEAGELDFL 353

Query: 54  PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFE 110
           PK  V        ++++   N+    IG+EP+F+  E       W  + I   K  +FF 
Sbjct: 354 PKALVN-------EFIKDRFNKSLTSIGIEPVFEVDETLLKDAEWFDDEIIGTKHGDFFV 406

Query: 111 TRVTEYQQGAE 121
            R   Y + A+
Sbjct: 407 KRSVNYTKRAQ 417


>gi|15616797|ref|NP_240009.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. APS (Acyrthosiphon pisum)]
 gi|219681552|ref|YP_002467937.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera
           aphidicola str. 5A (Acyrthosiphon pisum)]
 gi|219682108|ref|YP_002468492.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera
           aphidicola str. Tuc7 (Acyrthosiphon pisum)]
 gi|257471235|ref|ZP_05635234.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. LSR1 (Acyrthosiphon pisum)]
 gi|11134533|sp|P57275|RIR2_BUCAI RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|25285834|pir||G84950 ribonucleoside-diphosphate reductase (EC 1.17.4.1) nrdB [imported]
           - Buchnera sp. (strain APS)
 gi|10038860|dbj|BAB12895.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera
           aphidicola str. APS (Acyrthosiphon pisum)]
 gi|219621841|gb|ACL29997.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera
           aphidicola str. Tuc7 (Acyrthosiphon pisum)]
 gi|219624395|gb|ACL30550.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera
           aphidicola str. 5A (Acyrthosiphon pisum)]
 gi|311087074|gb|ADP67154.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. JF99 (Acyrthosiphon pisum)]
          Length = 376

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 5/102 (4%)

Query: 2   RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +      EN      E ++++  +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLLSNIKNNENMEDVVLECKEEAINIFISAAQQEKKWASYLFKSGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE 98
            +GLN     QY+++I N R H IG +  FK   NP PW+++
Sbjct: 297 MLGLNKDILCQYIEYITNIRMHAIGFKMPFKKQSNPIPWIND 338


>gi|323945045|gb|EGB41110.1| nrdB protein [Escherichia coli H120]
 gi|333002093|gb|EGK21659.1| ribonucleoside-diphosphate reductase 1 subunit beta domain protein
           [Shigella flexneri K-218]
          Length = 178

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 39  RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 98

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 99  MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 139


>gi|297521777|ref|ZP_06940163.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           OP50]
          Length = 174

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 35  RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 94

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 95  MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 135


>gi|330445621|ref|ZP_08309273.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328489812|dbj|GAA03770.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 377

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E +Q+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLLRTGQDDPEMAEIAVECEQECFDIFKSAAEQEKDWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL P ++  T+NP PW++
Sbjct: 297 MIGLNKQILCQYVEYITNLRMSAVGLRPAYEGATQNPIPWIN 338


>gi|323650974|ref|YP_004243617.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. natto]
 gi|323461614|dbj|BAJ77030.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. natto]
          Length = 347

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 4/127 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F   ++  I  + P L T+EF +       E   LE  +  E + K    ++
Sbjct: 218 RDEMKHSYFQTILVRDILTQYPELNTEEFSEFVYDFFTELVQLEREFC-EDLYKNTPDID 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS--EVIDLKKEK-NFFETRVTEYQQ 118
               ++Y+ + AN     +GL+ +F   +NP PW++  +  +L   K +FFE +   Y +
Sbjct: 277 IEEVKEYIGYRANLILDNLGLDQIFAAKKNPMPWITAFDPDNLNNTKRDFFEDKEVNYGK 336

Query: 119 GAELKWD 125
             E K D
Sbjct: 337 ANEQKND 343


>gi|293395206|ref|ZP_06639492.1| ribonucleoside-diphosphate reductase [Serratia odorifera DSM 4582]
 gi|291422383|gb|EFE95626.1| ribonucleoside-diphosphate reductase [Serratia odorifera DSM 4582]
          Length = 376

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGADDPEMAEIAVECQQQCYDLFVLAAQQEKEWAEYLFSGGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   FK   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGAPFKTRSNPIPWIN 337


>gi|145634465|ref|ZP_01790175.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           influenzae PittAA]
 gi|229845068|ref|ZP_04465204.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 6P18H1]
 gi|229846892|ref|ZP_04466999.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 7P49H1]
 gi|145268445|gb|EDK08439.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           influenzae PittAA]
 gi|229810381|gb|EEP46100.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 7P49H1]
 gi|229812040|gb|EEP47733.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 6P18H1]
          Length = 376

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +      L      +E +Q++  +   A   E A+A      G 
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDLEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWIN 337


>gi|21244791|ref|NP_644373.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           axonopodis pv. citri str. 306]
 gi|325927516|ref|ZP_08188754.1| ribonucleotide reductase, beta subunit [Xanthomonas perforans
           91-118]
 gi|21110489|gb|AAM38909.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           axonopodis pv. citri str. 306]
 gi|325542109|gb|EGD13613.1| ribonucleotide reductase, beta subunit [Xanthomonas perforans
           91-118]
          Length = 347

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  EN  L   E           A  LE  +  E +  G  G++
Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L++   +N  PW+    D   + + +FFE R   Y++
Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337


>gi|255928974|ref|YP_003097286.1| ribonucleotide reductase B subunit [Synechococcus phage S-RSM4]
 gi|255705260|emb|CAR63249.1| ribonucleotide reductase B subunit [Synechococcus phage S-RSM4]
          Length = 394

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 6/100 (6%)

Query: 2   RDESLHLNFGIDVINQIK-IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           RDES H+    +++N+ K  ++P +    KE ++    M  +    E  +A      G  
Sbjct: 254 RDESQHMTITQNILNKWKEGDDPEMVQIAKEEEENVYDMFRQCVEEEKLWAEYLFKDGSI 313

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFK--YTENPFPW 95
           +GLN     +Y+++ ANRR   IGL+ +F    + NP PW
Sbjct: 314 IGLNDKLLSKYVEWTANRRLKSIGLKAIFDTPVSNNPLPW 353


>gi|58580098|ref|YP_199114.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           oryzae pv. oryzae KACC10331]
 gi|84622097|ref|YP_449469.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           oryzae pv. oryzae MAFF 311018]
 gi|58424692|gb|AAW73729.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas oryzae
           pv. oryzae KACC10331]
 gi|84366037|dbj|BAE67195.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas oryzae
           pv. oryzae MAFF 311018]
          Length = 347

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  EN  L   E           A  LE  +  E +  G  G++
Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L++   +N  PW+    D   + + +FFE R   Y++
Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337


>gi|326782933|ref|YP_004323331.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-RSM4]
 gi|310004192|gb|ADO98586.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-RSM4]
          Length = 388

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 15/130 (11%)

Query: 2   RDESLHLNFGIDVI-NQIKIENPHLWTKEFQQK-------SRTMLHEATLLEIAYAHETM 53
           RDES HL    +++ N  K ++  +     ++K        RT+  E T     +   +M
Sbjct: 248 RDESQHLVITQNILKNWAKGDDSEMAEIAKEEKPFVVDMFKRTVEEEKTWANYLFREGSM 307

Query: 54  PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEKNF-FE 110
               +GLN      Y+++IANRR   IGL+P+F      NP PW    ++ K ++N   E
Sbjct: 308 ----IGLNDRLLHNYVEWIANRRMKAIGLDPVFDQVARNNPLPWTQHWLNSKGQQNAPQE 363

Query: 111 TRVTEYQQGA 120
           T +  Y  G 
Sbjct: 364 TEIESYVVGG 373


>gi|56460472|ref|YP_155753.1| ribonucleotide-diphosphate reductase subunit beta [Idiomarina
           loihiensis L2TR]
 gi|56179482|gb|AAV82204.1| Ribonucleotide reductase, beta subunit [Idiomarina loihiensis L2TR]
          Length = 377

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 6/105 (5%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE++HL     ++N  Q   ++P +    +E +  +  +   A   E  +AH     G 
Sbjct: 237 RDENVHLTSTQHILNLWQYGEDDPEMKEIAEELRDDAYEIFMTAVKQEKQWAHYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVI 100
            +GLN     QY+++IAN R   IG + P      NP PWM++ +
Sbjct: 297 MIGLNESMLCQYVEYIANLRMQAIGFDAPFENQRSNPLPWMNKYL 341


>gi|311085920|gb|ADP66002.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. LL01 (Acyrthosiphon pisum)]
 gi|311086491|gb|ADP66572.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. TLW03 (Acyrthosiphon pisum)]
 gi|311087626|gb|ADP67705.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. JF98 (Acyrthosiphon pisum)]
          Length = 359

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 5/102 (4%)

Query: 2   RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +      EN      E ++++  +   A   E  +A      G 
Sbjct: 220 RDEALHLTGTQHILNLLSNIKNNENMEDVVLECKEEAINIFISAAQQEKKWASYLFKSGS 279

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE 98
            +GLN     QY+++I N R H IG +  FK   NP PW+++
Sbjct: 280 MLGLNKDILCQYIEYITNIRMHAIGFKMPFKKQSNPIPWIND 321


>gi|188578920|ref|YP_001915849.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           oryzae pv. oryzae PXO99A]
 gi|188523372|gb|ACD61317.1| ribonucleoside-diphosphate reductase, beta subunit [Xanthomonas
           oryzae pv. oryzae PXO99A]
          Length = 347

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  EN  L   E           A  LE  +  E +  G  G++
Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L++   +N  PW+    D   + + +FFE R   Y++
Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337


>gi|166710317|ref|ZP_02241524.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           oryzae pv. oryzicola BLS256]
          Length = 347

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  EN  L   E           A  LE  +  E +  G  G++
Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAINLETQWTAEVL-DGIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L++   +N  PW+    D   + + +FFE R   Y++
Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337


>gi|332093862|gb|EGI98916.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           boydii 5216-82]
          Length = 376

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|218690398|ref|YP_002398610.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           ED1a]
 gi|218427962|emb|CAR08882.2| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli ED1a]
          Length = 376

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|153835812|ref|ZP_01988479.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio harveyi
           HY01]
 gi|148867435|gb|EDL66832.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio harveyi
           HY01]
          Length = 377

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +IN ++            +E +Q+   +  EA   E  +A      G 
Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFSFMQIAEEAKQECFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   + + T NP PW++
Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATSNPIPWIN 338


>gi|312967536|ref|ZP_07781751.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 2362-75]
 gi|312287733|gb|EFR15638.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 2362-75]
          Length = 359

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 220 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 279

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 280 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 320


>gi|15802782|ref|NP_288809.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 EDL933]
 gi|15832372|ref|NP_311145.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. Sakai]
 gi|16130170|ref|NP_416738.1| ribonucleoside-diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. MG1655]
 gi|82544520|ref|YP_408467.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
           Sb227]
 gi|82777644|ref|YP_403993.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           dysenteriae Sd197]
 gi|89109052|ref|AP_002832.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli str. K-12 substr. W3110]
 gi|157161718|ref|YP_001459036.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           HS]
 gi|170081853|ref|YP_001731173.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. DH10B]
 gi|187731010|ref|YP_001881065.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
           CDC 3083-94]
 gi|188495860|ref|ZP_03003130.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 53638]
 gi|195935609|ref|ZP_03080991.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. EC4024]
 gi|218548311|ref|YP_002382102.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia
           fergusonii ATCC 35469]
 gi|218705765|ref|YP_002413284.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           UMN026]
 gi|238901409|ref|YP_002927205.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli BW2952]
 gi|254794126|ref|YP_003078963.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. TW14359]
 gi|256022083|ref|ZP_05435948.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           4_1_40B]
 gi|261223312|ref|ZP_05937593.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261259138|ref|ZP_05951671.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. FRIK966]
 gi|293405702|ref|ZP_06649694.1| nrdB [Escherichia coli FVEC1412]
 gi|293410599|ref|ZP_06654175.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
 gi|298381383|ref|ZP_06990982.1| nrdB [Escherichia coli FVEC1302]
 gi|309785072|ref|ZP_07679705.1| ribonucleoside-diphosphate reductase 1, subunit beta [Shigella
           dysenteriae 1617]
 gi|312973510|ref|ZP_07787682.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 1827-70]
 gi|57014104|sp|P69924|RIR2_ECOLI RecName: Full=Ribonucleoside-diphosphate reductase 1 subunit beta;
           AltName: Full=Protein B2; AltName: Full=Protein R2;
           AltName: Full=Ribonucleotide reductase 1
 gi|57014105|sp|P69925|RIR2_ECO57 RecName: Full=Ribonucleoside-diphosphate reductase 1 subunit beta;
           AltName: Full=Protein B2; AltName: Full=Protein R2;
           AltName: Full=Ribonucleotide reductase 1
 gi|12516573|gb|AAG57364.1|AE005456_1 ribonucleoside diphosphage reductase 1, beta subunit, B2
           [Escherichia coli O157:H7 str. EDL933]
 gi|146967|gb|AAA24224.1| ribonucleoside diphosphate reductase B2 subunit precursor
           [Escherichia coli]
 gi|1788567|gb|AAC75295.1| ribonucleoside-diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. MG1655]
 gi|1799582|dbj|BAA16054.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli str. K12 substr. W3110]
 gi|13362587|dbj|BAB36541.1| ribonucleoside-diphosphate reductase 1 beta subunit [Escherichia
           coli O157:H7 str. Sakai]
 gi|81241792|gb|ABB62502.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           dysenteriae Sd197]
 gi|81245931|gb|ABB66639.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           boydii Sb227]
 gi|157067398|gb|ABV06653.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli HS]
 gi|169889688|gb|ACB03395.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. DH10B]
 gi|187428002|gb|ACD07276.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella boydii
           CDC 3083-94]
 gi|188491059|gb|EDU66162.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 53638]
 gi|218355852|emb|CAQ88465.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia fergusonii ATCC 35469]
 gi|218432862|emb|CAR13756.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli UMN026]
 gi|238863475|gb|ACR65473.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli BW2952]
 gi|254593526|gb|ACT72887.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli O157:H7 str. TW14359]
 gi|284922226|emb|CBG35308.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
           042]
 gi|291427910|gb|EFF00937.1| nrdB [Escherichia coli FVEC1412]
 gi|291471067|gb|EFF13551.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
 gi|298278825|gb|EFI20339.1| nrdB [Escherichia coli FVEC1302]
 gi|308927442|gb|EFP72916.1| ribonucleoside-diphosphate reductase 1, subunit beta [Shigella
           dysenteriae 1617]
 gi|309702545|emb|CBJ01872.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
           ETEC H10407]
 gi|310332105|gb|EFP99340.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 1827-70]
 gi|315615496|gb|EFU96128.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 3431]
 gi|320184866|gb|EFW59654.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri CDC 796-83]
 gi|320663001|gb|EFX30318.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O55:H7 str. USDA 5905]
 gi|327252504|gb|EGE64163.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli STEC_7v]
 gi|332094036|gb|EGI99088.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           boydii 3594-74]
 gi|332344015|gb|AEE57349.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli UMNK88]
          Length = 376

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|170767354|ref|ZP_02901807.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           albertii TW07627]
 gi|170123688|gb|EDS92619.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           albertii TW07627]
          Length = 376

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|331035505|gb|AEC53062.1| ribonucleotide reductase subunit B [Synechococcus phage S-CRM01]
          Length = 381

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQK---SRTMLHEATLLEIAYAHETMPKG-F 57
           RDE+ HL    ++IN  +  +     K + ++   + ++   A   E A+A      G  
Sbjct: 241 RDENQHLFLTQNIINNWRNNDDPEMKKIYNEEIDHTTSLFEAAVDQEKAWAQYLFKTGSM 300

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114
           +GL+      Y+++IANRR   IG++P+++     NP PWM   +  K  +N   ET + 
Sbjct: 301 IGLSEKLLCNYVEWIANRRMKAIGIKPIYEIPANSNPLPWMDHWLKSKGVQNAPQETEIE 360

Query: 115 EYQQGA 120
            Y  G 
Sbjct: 361 SYIVGG 366


>gi|326781924|ref|YP_004322326.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM2]
 gi|310003114|gb|ADO97512.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM2]
          Length = 397

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 6/108 (5%)

Query: 2   RDESLHLNFGIDVINQ-IKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           RDE+ HL    +++N+  + ++P +    KE ++ +      A   E  +A      G  
Sbjct: 257 RDENQHLAITQNILNKWAQGDDPEMKQIMKEEEEWTYKAFDNAVNEEKRWADYLFKDGSM 316

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLK 103
           +GLN    +QY++++ANRR   IGL+P +    + NP PW    I  K
Sbjct: 317 IGLNDKLLQQYVEWVANRRLKAIGLKPQYDIAASANPLPWTQHWISSK 364


>gi|117624429|ref|YP_853342.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           APEC O1]
 gi|237704711|ref|ZP_04535192.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           3_2_53FAA]
 gi|115513553|gb|ABJ01628.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
           APEC O1]
 gi|226901077|gb|EEH87336.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           3_2_53FAA]
 gi|323952030|gb|EGB47904.1| ribonucleotide reductase [Escherichia coli H252]
 gi|323956004|gb|EGB51757.1| ribonucleotide reductase [Escherichia coli H263]
          Length = 420

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 281 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 340

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 341 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 381


>gi|170682190|ref|YP_001744431.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           SMS-3-5]
 gi|170519908|gb|ACB18086.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli SMS-3-5]
 gi|315285847|gb|EFU45287.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 110-3]
 gi|315298059|gb|EFU57328.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 16-3]
          Length = 393

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 254 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 313

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 314 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 354


>gi|300936793|ref|ZP_07151685.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 21-1]
 gi|300458078|gb|EFK21571.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 21-1]
          Length = 405

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 266 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 325

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 326 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 366


>gi|26248623|ref|NP_754663.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           CFT073]
 gi|74312755|ref|YP_311174.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sonnei
           Ss046]
 gi|91211528|ref|YP_541514.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           UTI89]
 gi|110642443|ref|YP_670173.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           536]
 gi|157157492|ref|YP_001463584.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           E24377A]
 gi|161485800|ref|NP_708125.3| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri 2a str. 301]
 gi|161486465|ref|NP_837840.2| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri 2a str. 2457T]
 gi|191166513|ref|ZP_03028343.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B7A]
 gi|191170278|ref|ZP_03031832.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli F11]
 gi|194433322|ref|ZP_03065602.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella
           dysenteriae 1012]
 gi|209919687|ref|YP_002293771.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           SE11]
 gi|215487452|ref|YP_002329883.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O127:H6 str. E2348/69]
 gi|218554798|ref|YP_002387711.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           IAI1]
 gi|218559152|ref|YP_002392065.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           S88]
 gi|218695841|ref|YP_002403508.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           55989]
 gi|218700706|ref|YP_002408335.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           IAI39]
 gi|227887293|ref|ZP_04005098.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 83972]
 gi|253772842|ref|YP_003035673.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254162246|ref|YP_003045354.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           B str. REL606]
 gi|256017603|ref|ZP_05431468.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9]
 gi|260844831|ref|YP_003222609.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O103:H2 str. 12009]
 gi|260856285|ref|YP_003230176.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O26:H11 str. 11368]
 gi|260868965|ref|YP_003235367.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O111:H- str. 11128]
 gi|293446578|ref|ZP_06663000.1| ribonucleoside-diphosphate reductase [Escherichia coli B088]
 gi|300818165|ref|ZP_07098377.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 107-1]
 gi|300822109|ref|ZP_07102251.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 119-7]
 gi|300981251|ref|ZP_07175428.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 200-1]
 gi|300983269|ref|ZP_07176508.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 45-1]
 gi|301048988|ref|ZP_07195975.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 185-1]
 gi|306814652|ref|ZP_07448814.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           NC101]
 gi|307311198|ref|ZP_07590842.1| ribonucleotide reductase [Escherichia coli W]
 gi|309793115|ref|ZP_07687543.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 145-7]
 gi|331647890|ref|ZP_08348982.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M605]
 gi|331668939|ref|ZP_08369787.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA271]
 gi|331678186|ref|ZP_08378861.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H591]
 gi|26109028|gb|AAN81231.1|AE016763_190 Ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
           CFT073]
 gi|73856232|gb|AAZ88939.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           sonnei Ss046]
 gi|91073102|gb|ABE07983.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
           UTI89]
 gi|110344035|gb|ABG70272.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
           536]
 gi|157079522|gb|ABV19230.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E24377A]
 gi|190903473|gb|EDV63192.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B7A]
 gi|190909794|gb|EDV69379.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli F11]
 gi|194418416|gb|EDX34505.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella
           dysenteriae 1012]
 gi|209912946|dbj|BAG78020.1| ribonucleoside diphosphate reductase beta subunit [Escherichia coli
           SE11]
 gi|215265524|emb|CAS09927.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli O127:H6 str. E2348/69]
 gi|218352573|emb|CAU98352.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli 55989]
 gi|218361566|emb|CAQ99157.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli IAI1]
 gi|218365921|emb|CAR03663.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli S88]
 gi|218370692|emb|CAR18503.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli IAI39]
 gi|222033996|emb|CAP76737.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli LF82]
 gi|227835643|gb|EEJ46109.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 83972]
 gi|242377869|emb|CAQ32637.1| nrdB, subunit of B2 protein and GDP reductase [multifunctional]
           [Escherichia coli BL21(DE3)]
 gi|253323886|gb|ACT28488.1| ribonucleotide reductase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253974147|gb|ACT39818.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
           B str. REL606]
 gi|253978314|gb|ACT43984.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
           BL21(DE3)]
 gi|257754934|dbj|BAI26436.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O26:H11 str. 11368]
 gi|257759978|dbj|BAI31475.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O103:H2 str. 12009]
 gi|257765321|dbj|BAI36816.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O111:H- str. 11128]
 gi|281179326|dbj|BAI55656.1| ribonucleoside diphosphate reductase beta subunit [Escherichia coli
           SE15]
 gi|291323408|gb|EFE62836.1| ribonucleoside-diphosphate reductase [Escherichia coli B088]
 gi|294490302|gb|ADE89058.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli IHE3034]
 gi|300299180|gb|EFJ55565.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 185-1]
 gi|300307615|gb|EFJ62135.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 200-1]
 gi|300408603|gb|EFJ92141.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 45-1]
 gi|300525239|gb|EFK46308.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 119-7]
 gi|300529309|gb|EFK50371.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 107-1]
 gi|305852046|gb|EFM52498.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           NC101]
 gi|306908704|gb|EFN39201.1| ribonucleotide reductase [Escherichia coli W]
 gi|307554301|gb|ADN47076.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli ABU 83972]
 gi|308123401|gb|EFO60663.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 145-7]
 gi|312946856|gb|ADR27683.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O83:H1 str. NRG 857C]
 gi|313651060|gb|EFS15459.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           flexneri 2a str. 2457T]
 gi|315061535|gb|ADT75862.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli W]
 gi|315292180|gb|EFU51532.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 153-1]
 gi|320178793|gb|EFW53756.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
           ATCC 9905]
 gi|320196104|gb|EFW70728.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           WV_060327]
 gi|320199830|gb|EFW74419.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           EC4100B]
 gi|323156512|gb|EFZ42666.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli EPECa14]
 gi|323161696|gb|EFZ47579.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli E128010]
 gi|323168602|gb|EFZ54282.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           sonnei 53G]
 gi|323171914|gb|EFZ57558.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli LT-68]
 gi|323176838|gb|EFZ62428.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 1180]
 gi|323184146|gb|EFZ69523.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 1357]
 gi|323188037|gb|EFZ73332.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli RN587/1]
 gi|323377884|gb|ADX50152.1| Ribonucleoside-diphosphate reductase [Escherichia coli KO11]
 gi|324006608|gb|EGB75827.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 57-2]
 gi|324013118|gb|EGB82337.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 60-1]
 gi|324117882|gb|EGC11781.1| ribonucleotide reductase [Escherichia coli E1167]
 gi|325496725|gb|EGC94584.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia
           fergusonii ECD227]
 gi|330912066|gb|EGH40576.1| ribonucleotide reductase of class 1a (aerobic), beta subunit
           [Escherichia coli AA86]
 gi|331043614|gb|EGI15752.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M605]
 gi|331064133|gb|EGI36044.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA271]
 gi|331074646|gb|EGI45966.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H591]
 gi|332096162|gb|EGJ01165.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           dysenteriae 155-74]
 gi|332754883|gb|EGJ85248.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           flexneri 4343-70]
 gi|332755286|gb|EGJ85650.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           flexneri K-671]
 gi|332756386|gb|EGJ86737.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           flexneri 2747-71]
 gi|332766056|gb|EGJ96266.1| nrdB [Shigella flexneri 2930-71]
 gi|333001382|gb|EGK20950.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           flexneri VA-6]
 gi|333002603|gb|EGK22163.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           flexneri K-272]
 gi|333016476|gb|EGK35807.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           flexneri K-304]
 gi|333016745|gb|EGK36073.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           flexneri K-227]
          Length = 376

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|320175005|gb|EFW50120.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           dysenteriae CDC 74-1112]
          Length = 376

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|300897697|ref|ZP_07116095.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 198-1]
 gi|301022393|ref|ZP_07186277.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 69-1]
 gi|331683911|ref|ZP_08384507.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H299]
 gi|300358575|gb|EFJ74445.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 198-1]
 gi|300397543|gb|EFJ81081.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 69-1]
 gi|323967677|gb|EGB63089.1| ribonucleotide reductase [Escherichia coli M863]
 gi|331078863|gb|EGI50065.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H299]
          Length = 393

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 254 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 313

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 314 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 354


>gi|161617990|ref|YP_001595470.1| ribonucleotide reductase beta subunit [Enterobacteria phage
           phiEcoM-GJ1]
 gi|150416409|gb|ABR68787.1| ribonucleotide reductase beta subunit [Enterobacteria phage
           phiEcoM-GJ1]
          Length = 372

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 14/128 (10%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +     E +Q+ + +  +A   E  +A      G 
Sbjct: 233 RDEALHLTGTQHMLNLLASGKDDPEMGEIAAECRQECQKLFEDAAQQEKDWADYLFKDGS 292

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-----SEVIDLKKEKNFFET 111
            +GLN      Y+++I N R   +GL+  FK   NP PW+     S+ + +  +    ET
Sbjct: 293 MIGLNKQILCGYVEYITNIRMQAVGLDAPFKGATNPIPWINAWLNSDAVQVAPQ----ET 348

Query: 112 RVTEYQQG 119
            ++ Y  G
Sbjct: 349 EISSYLVG 356


>gi|110806205|ref|YP_689725.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri 5 str. 8401]
 gi|110615753|gb|ABF04420.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           flexneri 5 str. 8401]
 gi|281601680|gb|ADA74664.1| putative ribonucleotide reductase, beta subunit [Shigella flexneri
           2002017]
          Length = 453

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 314 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 373

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 374 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 414


>gi|61680624|pdb|1YFD|A Chain A, Crystal Structure Of The Y122h Mutant Of Ribonucleotide
           Reductase R2 Protein From E. Coli
 gi|61680625|pdb|1YFD|B Chain B, Crystal Structure Of The Y122h Mutant Of Ribonucleotide
           Reductase R2 Protein From E. Coli
          Length = 375

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 336


>gi|1942079|pdb|1XIK|A Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain
 gi|1942080|pdb|1XIK|B Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain
 gi|15825694|pdb|1JPR|A Chain A, Mn Substituted Ribonucleotide Reductase R2 From E. Coli
           Oxidized By Nitric Oxide
 gi|15825695|pdb|1JPR|B Chain B, Mn Substituted Ribonucleotide Reductase R2 From E. Coli
           Oxidized By Nitric Oxide
 gi|15826771|pdb|1JQC|A Chain A, Mn Substituted Ribonucleotide Reductase R2 From E. Coli
           Oxidized By Hydrogen Peroxide And Hydroxylamine
 gi|15826772|pdb|1JQC|B Chain B, Mn Substituted Ribonucleotide Reductase R2 From E. Coli
           Oxidized By Hydrogen Peroxide And Hydroxylamine
 gi|29726528|pdb|1MXR|A Chain A, High Resolution Structure Of Ribonucleotide Reductase R2
           From E. Coli In Its Oxidised (Met) Form
 gi|29726529|pdb|1MXR|B Chain B, High Resolution Structure Of Ribonucleotide Reductase R2
           From E. Coli In Its Oxidised (Met) Form
          Length = 375

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 336


>gi|189403970|ref|ZP_02786340.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4501]
 gi|217327202|ref|ZP_03443285.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. TW14588]
 gi|301026864|ref|ZP_07190263.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 196-1]
 gi|301647674|ref|ZP_07247468.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 146-1]
 gi|189368305|gb|EDU86721.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4501]
 gi|217319569|gb|EEC27994.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. TW14588]
 gi|260448673|gb|ACX39095.1| Ribonucleoside-diphosphate reductase [Escherichia coli DH1]
 gi|299879524|gb|EFI87735.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 196-1]
 gi|301074204|gb|EFK89010.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 146-1]
 gi|326339582|gb|EGD63393.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. 1125]
          Length = 393

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 254 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 313

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 314 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 354


>gi|304445703|pdb|2XOF|A Chain A, Ribonucleotide Reductase Y122no2y Modified R2 Subunit Of
           E. Coli
 gi|304445704|pdb|2XOF|B Chain B, Ribonucleotide Reductase Y122no2y Modified R2 Subunit Of
           E. Coli
          Length = 375

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 336


>gi|40889712|pdb|1RSR|A Chain A, Azide Complex Of The Diferrous F208a Mutant R2 Subunit Of
           Ribonucleotide Reductase
 gi|40889713|pdb|1RSR|B Chain B, Azide Complex Of The Diferrous F208a Mutant R2 Subunit Of
           Ribonucleotide Reductase
          Length = 375

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 336


>gi|194427189|ref|ZP_03059740.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B171]
 gi|194436109|ref|ZP_03068211.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 101-1]
 gi|300918603|ref|ZP_07135191.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 115-1]
 gi|300931418|ref|ZP_07146747.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 187-1]
 gi|301303305|ref|ZP_07209430.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 124-1]
 gi|194414810|gb|EDX31081.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B171]
 gi|194424837|gb|EDX40822.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 101-1]
 gi|300414255|gb|EFJ97565.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 115-1]
 gi|300460788|gb|EFK24281.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 187-1]
 gi|300841479|gb|EFK69239.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 124-1]
 gi|323961541|gb|EGB57149.1| ribonucleotide reductase [Escherichia coli H489]
 gi|323973062|gb|EGB68256.1| ribonucleotide reductase [Escherichia coli TA007]
          Length = 393

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 254 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 313

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 314 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 354


>gi|332278613|ref|ZP_08391026.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9]
 gi|332100965|gb|EGJ04311.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9]
          Length = 420

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 281 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 340

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 341 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 381


>gi|331653669|ref|ZP_08354670.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M718]
 gi|331048518|gb|EGI20594.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M718]
          Length = 449

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 310 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 369

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 370 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 410


>gi|326783480|ref|YP_004324017.1| ribonucleotide reductase A subunit [Synechococcus phage Syn19]
 gi|310004983|gb|ADO99373.1| ribonucleotide reductase A subunit [Synechococcus phage Syn19]
          Length = 388

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVINQ-IKIENPH--LWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           RDES HL    +++ +  + ++P   L  +E Q     M       E A+A+     G  
Sbjct: 248 RDESQHLVITQNILRKWSEGDDPEMKLIAQEEQSYVTEMFKRTVEEEKAWANYLFRDGSL 307

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114
           +GLN      Y+++IANRR   +G++P++      NP PW    ++ K ++N   ET + 
Sbjct: 308 IGLNDRLLYNYVEWIANRRMKAVGIKPIYDIPAKNNPLPWTEHWLNSKGQQNAPQETEIE 367

Query: 115 EYQQGA 120
            Y  G 
Sbjct: 368 SYVVGG 373


>gi|331663742|ref|ZP_08364652.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA143]
 gi|323977567|gb|EGB72653.1| ribonucleotide reductase [Escherichia coli TW10509]
 gi|331059541|gb|EGI31518.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA143]
          Length = 389

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 350


>gi|54309624|ref|YP_130644.1| ribonucleotide-diphosphate reductase subunit beta [Photobacterium
           profundum SS9]
 gi|46914062|emb|CAG20842.1| putative ribonucleoside-diphosphate reductase,beta subunit
           [Photobacterium profundum SS9]
          Length = 377

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+   +  EA   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLLRGRHDDPEMADIAQECQQECFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GLE  +    +NP PW++
Sbjct: 297 MIGLNKEILCQYVEYITNLRMKAVGLEQAYPGANQNPIPWIN 338


>gi|324112772|gb|EGC06748.1| ribonucleotide reductase [Escherichia fergusonii B253]
          Length = 389

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 350


>gi|193068232|ref|ZP_03049196.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E110019]
 gi|300903617|ref|ZP_07121535.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 84-1]
 gi|300926340|ref|ZP_07142140.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 182-1]
 gi|301328725|ref|ZP_07221778.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 78-1]
 gi|30041924|gb|AAP17650.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           flexneri 2a str. 2457T]
 gi|56383622|gb|AAN43832.2| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           flexneri 2a str. 301]
 gi|192958511|gb|EDV88950.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E110019]
 gi|300404353|gb|EFJ87891.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 84-1]
 gi|300417617|gb|EFK00928.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 182-1]
 gi|300844873|gb|EFK72633.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 78-1]
 gi|315255170|gb|EFU35138.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 85-1]
          Length = 389

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 350


>gi|331642864|ref|ZP_08343999.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H736]
 gi|331039662|gb|EGI11882.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H736]
          Length = 449

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 310 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 369

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 370 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 410


>gi|329119976|ref|ZP_08248648.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           bacilliformis ATCC BAA-1200]
 gi|327463889|gb|EGF10203.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           bacilliformis ATCC BAA-1200]
          Length = 384

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTSTQHMLNLMRAGADDPEMAEIAVELQDECFKLFKKAAEQEKEWAAYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMS 97
            +GLN     QY+++I N R   +GL+P F  + +NP PW++
Sbjct: 304 MIGLNKDILCQYVEYITNHRMIAVGLDPAFPASNQNPIPWIN 345


>gi|331658316|ref|ZP_08359278.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA206]
 gi|307626227|gb|ADN70531.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           UM146]
 gi|331056564|gb|EGI28573.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA206]
          Length = 389

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 350


>gi|291283479|ref|YP_003500297.1| Ribonucleoside-diphosphate reductase 1, beta subunit, B2
           [Escherichia coli O55:H7 str. CB9615]
 gi|290763352|gb|ADD57313.1| Ribonucleoside-diphosphate reductase 1, beta subunit, B2
           [Escherichia coli O55:H7 str. CB9615]
          Length = 389

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 350


>gi|170019452|ref|YP_001724406.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           ATCC 8739]
 gi|187775748|ref|ZP_02798054.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4196]
 gi|188024880|ref|ZP_02774660.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4113]
 gi|189010171|ref|ZP_02805091.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4076]
 gi|189402101|ref|ZP_02779989.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4401]
 gi|189403050|ref|ZP_02792862.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4486]
 gi|189404930|ref|ZP_02812148.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC869]
 gi|189405663|ref|ZP_02823406.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC508]
 gi|208806716|ref|ZP_03249053.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4206]
 gi|208812585|ref|ZP_03253914.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4045]
 gi|208820390|ref|ZP_03260710.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4042]
 gi|209398142|ref|YP_002271641.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4115]
 gi|293415528|ref|ZP_06658171.1| ribonucleoside-diphosphate reductase [Escherichia coli B185]
 gi|300948933|ref|ZP_07162994.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 116-1]
 gi|300958921|ref|ZP_07171024.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 175-1]
 gi|307138893|ref|ZP_07498249.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           H736]
 gi|169754380|gb|ACA77079.1| Ribonucleoside-diphosphate reductase [Escherichia coli ATCC 8739]
 gi|187771218|gb|EDU35062.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4196]
 gi|188016038|gb|EDU54160.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4113]
 gi|189002108|gb|EDU71094.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4076]
 gi|189357709|gb|EDU76128.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4401]
 gi|189362845|gb|EDU81264.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4486]
 gi|189372811|gb|EDU91227.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC869]
 gi|189378868|gb|EDU97284.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC508]
 gi|208726517|gb|EDZ76118.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4206]
 gi|208733862|gb|EDZ82549.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4045]
 gi|208740513|gb|EDZ88195.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4042]
 gi|209159542|gb|ACI36975.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4115]
 gi|291433176|gb|EFF06155.1| ribonucleoside-diphosphate reductase [Escherichia coli B185]
 gi|300314424|gb|EFJ64208.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 175-1]
 gi|300451587|gb|EFK15207.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 116-1]
 gi|315136867|dbj|BAJ44026.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           DH1]
 gi|320192144|gb|EFW66789.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. EC1212]
 gi|320641061|gb|EFX10540.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. G5101]
 gi|320646450|gb|EFX15369.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H- str. 493-89]
 gi|320651547|gb|EFX19927.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H- str. H 2687]
 gi|320657299|gb|EFX25101.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O55:H7 str. 3256-97 TW 07815]
 gi|320667818|gb|EFX34726.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. LSU-61]
 gi|323936632|gb|EGB32918.1| ribonucleotide reductase [Escherichia coli E1520]
 gi|323941071|gb|EGB37258.1| ribonucleotide reductase [Escherichia coli E482]
 gi|326344044|gb|EGD67805.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. 1044]
          Length = 389

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 350


>gi|3891570|pdb|2AV8|A Chain A, Y122f Mutant Of Ribonucleotide Reductase From Escherichia
           Coli
 gi|3891571|pdb|2AV8|B Chain B, Y122f Mutant Of Ribonucleotide Reductase From Escherichia
           Coli
          Length = 340

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 336


>gi|83754022|pdb|2ALX|A Chain A, Ribonucleotide Reductase R2 From Escherichia Coli In Space
           Group P6(1)22
          Length = 340

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|3891582|pdb|1AV8|A Chain A, Ribonucleotide Reductase R2 Subunit From E. Coli
 gi|3891583|pdb|1AV8|B Chain B, Ribonucleotide Reductase R2 Subunit From E. Coli
          Length = 340

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 336


>gi|156975012|ref|YP_001445919.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio harveyi
           ATCC BAA-1116]
 gi|156526606|gb|ABU71692.1| hypothetical protein VIBHAR_02734 [Vibrio harveyi ATCC BAA-1116]
          Length = 377

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKI-ENPHLW---TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +IN ++  ++  L+    +E +Q+   +  EA   E  +A      G 
Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFLFMQIAEEEKQECFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   + + T NP PW++
Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATSNPIPWIN 338


>gi|254230294|ref|ZP_04923683.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio sp.
           Ex25]
 gi|151937191|gb|EDN56060.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio sp.
           Ex25]
          Length = 242

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +IN ++            +E +Q    +  EA   E  +A      G 
Sbjct: 102 RDEALHLNGTQHMINLLRNGQDDFTFMQIAEEAKQDCFDLFKEAAEQEKEWAEYLFKDGS 161

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   + + T NP PW++
Sbjct: 162 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATTNPIPWIN 203


>gi|1941986|pdb|1PFR|A Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain
 gi|1941987|pdb|1PFR|B Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain
          Length = 340

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 336


>gi|312162814|ref|YP_003933799.1| ribonucleotide reductase subunit 2 [Saimiriine herpesvirus 1]
 gi|308096447|gb|ADO13787.1| ribonucleotide reductase subunit 2 [Saimiriine herpesvirus 1]
          Length = 338

 Score = 45.1 bits (105), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 13/121 (10%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N      P    K    +   +  EA  +EI + H   P+    L+
Sbjct: 217 RDEAIHTTASCYIYNNYLTGYP----KPSTDRIHYLFREAVEIEIRFIHSQAPRDSHILD 272

Query: 62  APSCEQ---YMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL---KKEKNFFETRVTE 115
           A +  Q   Y+ F A+R    I L PLF   + P P  S  + L   +K  NFFE+R T 
Sbjct: 273 AAALRQIDNYVHFCADRLLKMIKLPPLF---DAPAPDCSFPLALMFTEKHTNFFESRSTA 329

Query: 116 Y 116
           Y
Sbjct: 330 Y 330


>gi|51595597|ref|YP_069788.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis IP 32953]
 gi|108806924|ref|YP_650840.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Antiqua]
 gi|108812924|ref|YP_648691.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Nepal516]
 gi|145599749|ref|YP_001163825.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Pestoides F]
 gi|149366796|ref|ZP_01888830.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           CA88-4125]
 gi|153950490|ref|YP_001401734.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis IP 31758]
 gi|161484771|ref|NP_670275.2| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           KIM 10]
 gi|161511422|ref|NP_992302.2| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           biovar Microtus str. 91001]
 gi|162418296|ref|YP_001605847.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Angola]
 gi|165924721|ref|ZP_02220553.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165938305|ref|ZP_02226863.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166009974|ref|ZP_02230872.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166211802|ref|ZP_02237837.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167400353|ref|ZP_02305866.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167419574|ref|ZP_02311327.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167424117|ref|ZP_02315870.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167470792|ref|ZP_02335496.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           FV-1]
 gi|170025073|ref|YP_001721578.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis YPIII]
 gi|186894660|ref|YP_001871772.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis PB1/+]
 gi|218928372|ref|YP_002346247.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           CO92]
 gi|229841157|ref|ZP_04461316.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229843262|ref|ZP_04463408.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229894122|ref|ZP_04509308.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           Pestoides A]
 gi|229903354|ref|ZP_04518467.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           Nepal516]
 gi|270487164|ref|ZP_06204238.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           KIM D27]
 gi|294503227|ref|YP_003567289.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           Z176003]
 gi|51588879|emb|CAH20493.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia
           pseudotuberculosis IP 32953]
 gi|108776572|gb|ABG19091.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Yersinia pestis Nepal516]
 gi|108778837|gb|ABG12895.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Yersinia pestis Antiqua]
 gi|115346983|emb|CAL19874.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           CO92]
 gi|145211445|gb|ABP40852.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Yersinia pestis Pestoides F]
 gi|149291170|gb|EDM41245.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           CA88-4125]
 gi|152961985|gb|ABS49446.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia
           pseudotuberculosis IP 31758]
 gi|162351111|gb|ABX85059.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           Angola]
 gi|165913683|gb|EDR32302.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165923781|gb|EDR40913.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165991370|gb|EDR43671.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166207573|gb|EDR52053.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166962315|gb|EDR58336.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167050302|gb|EDR61710.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167056966|gb|EDR66729.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169751607|gb|ACA69125.1| Ribonucleoside-diphosphate reductase [Yersinia pseudotuberculosis
           YPIII]
 gi|186697686|gb|ACC88315.1| ribonucleotide reductase [Yersinia pseudotuberculosis PB1/+]
 gi|229679124|gb|EEO75227.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           Nepal516]
 gi|229689609|gb|EEO81670.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229697523|gb|EEO87570.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229704007|gb|EEO91020.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           Pestoides A]
 gi|262361266|gb|ACY57987.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           D106004]
 gi|262365197|gb|ACY61754.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           D182038]
 gi|270335668|gb|EFA46445.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           KIM D27]
 gi|294353686|gb|ADE64027.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           Z176003]
 gi|320015945|gb|ADV99516.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 376

 Score = 45.1 bits (105), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +++  ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLMRLGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F    NP PW++
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGIPFSTRTNPIPWIN 337


>gi|324020907|gb|EGB90126.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 117-3]
          Length = 420

 Score = 45.1 bits (105), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 281 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 340

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 341 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 381


>gi|288549884|ref|ZP_06390831.1| ribonucleoside-diphosphate reductase, beta subunit [Enterobacter
           cancerogenus ATCC 35316]
 gi|288317051|gb|EFC55989.1| ribonucleoside-diphosphate reductase, beta subunit [Enterobacter
           cancerogenus ATCC 35316]
          Length = 420

 Score = 45.1 bits (105), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 281 RDEALHLTGTQHMLNLLRSGTDDPEMAAIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 340

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 341 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 381


>gi|332290530|ref|YP_004421382.1| ribonucleotide-diphosphate reductase subunit beta [Gallibacterium
           anatis UMN179]
 gi|330433426|gb|AEC18485.1| ribonucleotide-diphosphate reductase subunit beta [Gallibacterium
           anatis UMN179]
          Length = 376

 Score = 45.1 bits (105), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E QQ++  +   A   E  +A+     G 
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECQQEAYDLFVAAAEQEKEWANYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F    NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFTTRSNPIPWIN 337


>gi|21959884|gb|AAM86526.1|AE013899_3 ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Yersinia
           pestis KIM 10]
 gi|45435621|gb|AAS61179.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Microtus str. 91001]
          Length = 391

 Score = 45.1 bits (105), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +++  ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 252 RDEALHLTGTQHILNLMRLGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 311

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F    NP PW++
Sbjct: 312 MIGLNKEILCQYVEYITNIRMQAVGLGIPFSTRTNPIPWIN 352


>gi|325919223|ref|ZP_08181270.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC
           19865]
 gi|325923021|ref|ZP_08184721.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC
           19865]
 gi|325546491|gb|EGD17645.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC
           19865]
 gi|325550297|gb|EGD21104.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC
           19865]
          Length = 347

 Score = 45.1 bits (105), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  EN  L   +           A  LE  +  E +  G  G++
Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWTAEVL-DGIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L++   +N  PW+    D   + + +FFE R   Y++
Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337


>gi|290473788|ref|YP_003466662.1| ribonucleoside-diphosphate reductase 1 subunit beta [Xenorhabdus
           bovienii SS-2004]
 gi|289173095|emb|CBJ79868.1| ribonucleoside-diphosphate reductase 1, beta subunit [Xenorhabdus
           bovienii SS-2004]
          Length = 376

 Score = 45.1 bits (105), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIARECEQQCYDLFVQAAEQEKEWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLKLPFEARSNPIPWIN 337


>gi|71065825|ref|YP_264552.1| ribonucleotide-diphosphate reductase subunit beta [Psychrobacter
           arcticus 273-4]
 gi|71038810|gb|AAZ19118.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Psychrobacter arcticus 273-4]
          Length = 377

 Score = 45.1 bits (105), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++I  ++P +    KE  ++S  +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLMRIGRDDPEMVDIAKECYEESIEIFRKAAEQEKEWAGYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F K   NP PW++
Sbjct: 297 MIGLNKDILCQYIEYITNLRMEAVGLPVAFPKSKSNPIPWIN 338


>gi|311278798|ref|YP_003941029.1| Ribonucleoside-diphosphate reductase [Enterobacter cloacae SCF1]
 gi|308747993|gb|ADO47745.1| Ribonucleoside-diphosphate reductase [Enterobacter cloacae SCF1]
          Length = 376

 Score = 45.1 bits (105), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|21233407|ref|NP_639324.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
 gi|21115247|gb|AAM43206.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
          Length = 347

 Score = 45.1 bits (105), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  EN  L   +           A  LE  +  E +  G  G++
Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWTAEVL-DGIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L++   +N  PW+    D   + + +FFE R   Y++
Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337


>gi|157879968|pdb|1RNR|A Chain A, Autocatalytic Generation Of Dopa In The Engineered Protein
           R2 F208y From Escherichia Coli Ribonucleotide Reductase
           And Crystal Structure Of The Dopa-208 Protein
 gi|157879969|pdb|1RNR|B Chain B, Autocatalytic Generation Of Dopa In The Engineered Protein
           R2 F208y From Escherichia Coli Ribonucleotide Reductase
           And Crystal Structure Of The Dopa-208 Protein
          Length = 375

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F    NP PW++
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWIN 336


>gi|66770372|ref|YP_245134.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. campestris str. 8004]
 gi|188993572|ref|YP_001905582.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. campestris str. B100]
 gi|66575704|gb|AAY51114.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           campestris pv. campestris str. 8004]
 gi|167735332|emb|CAP53546.1| Ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           campestris pv. campestris]
          Length = 347

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  EN  L   +           A  LE  +  E +  G  G++
Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWTAEVL-DGIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L++   +N  PW+    D   + + +FFE R   Y++
Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337


>gi|215275538|sp|P0C8I0|RIR2_ASFK5 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 327

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE---IAYAHETMPKGFV 58
           RDE +H +F   +I+      P       ++    +L EA  L    I+YA +       
Sbjct: 196 RDEGMHCSFACFLISNYLNNIPE------EKIIHKILKEAVELVDEFISYAFDKARGSVP 249

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117
           G +     QY+++  +  C  +  + ++K  ENPFP M++    + EK NFFE R T+YQ
Sbjct: 250 GFSKEMLFQYIRYFTDNLCFMLQCKSIYK-VENPFPQMTKFFLNEVEKTNFFELRPTQYQ 308


>gi|153000811|ref|YP_001366492.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           baltica OS185]
 gi|160875520|ref|YP_001554836.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           baltica OS195]
 gi|151365429|gb|ABS08429.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS185]
 gi|160861042|gb|ABX49576.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS195]
          Length = 386

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 5/100 (5%)

Query: 2   RDESLHLNFG--IDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    I  I Q   ++P +     E QQ++  +  +A   E  +A      G 
Sbjct: 247 RDEALHLNSTQHILSIMQGGKDDPEMGEIAAECQQEAFDLFFKAAEQEKEWAKYLFKDGS 306

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
            +GLN     QY++FI N+R   + L   +    NP PWM
Sbjct: 307 MIGLNEQILCQYVEFITNQRMKSVNLPQPYPEITNPLPWM 346


>gi|42543283|pdb|1PIY|A Chain A, Ribonucleotide Reductase R2 Soaked With Ferrous Ion At
           Neutral Ph
 gi|42543284|pdb|1PIY|B Chain B, Ribonucleotide Reductase R2 Soaked With Ferrous Ion At
           Neutral Ph
 gi|42543506|pdb|1R65|A Chain A, Crystal Structure Of Ferrous Soaked Ribonucleotide
           Reductase R2 Subunit (Wildtype) At Ph 5 From E. Coli
 gi|42543507|pdb|1R65|B Chain B, Crystal Structure Of Ferrous Soaked Ribonucleotide
           Reductase R2 Subunit (Wildtype) At Ph 5 From E. Coli
          Length = 375

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F    NP PW++
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWIN 336


>gi|295098106|emb|CBK87196.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 420

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 281 RDEALHLTGTQHMLNLLRSGADDPEMAAIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 340

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 341 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 381


>gi|325914792|ref|ZP_08177129.1| ribonucleotide reductase, beta subunit [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325538985|gb|EGD10644.1| ribonucleotide reductase, beta subunit [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 349

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  EN  L   +           A  LE  +  E +  G  G++
Sbjct: 221 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWTAEVL-DGIDGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L++   +N  PW+    D   + + +FFE R   Y++
Sbjct: 280 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 339


>gi|217973230|ref|YP_002357981.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           baltica OS223]
 gi|304408853|ref|ZP_07390474.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS183]
 gi|307302856|ref|ZP_07582611.1| Ribonucleoside-diphosphate reductase [Shewanella baltica BA175]
 gi|217498365|gb|ACK46558.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS223]
 gi|304352674|gb|EFM17071.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS183]
 gi|306913216|gb|EFN43638.1| Ribonucleoside-diphosphate reductase [Shewanella baltica BA175]
 gi|315267707|gb|ADT94560.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS678]
          Length = 376

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 5/100 (5%)

Query: 2   RDESLHLNFG--IDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    I  I Q   ++P +     E QQ++  +  +A   E  +A      G 
Sbjct: 237 RDEALHLNSTQHILSIMQGGKDDPEMGEIAAECQQEAFDLFFKAAEQEKEWAKYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
            +GLN     QY++FI N+R   + L   +    NP PWM
Sbjct: 297 MIGLNEQILCQYVEFITNQRMKSVNLPQPYPEITNPLPWM 336


>gi|91227184|ref|ZP_01261643.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           alginolyticus 12G01]
 gi|262393879|ref|YP_003285733.1| ribonucleotide reductase of class Ia (aerobic) subunit beta [Vibrio
           sp. Ex25]
 gi|269967067|ref|ZP_06181135.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           alginolyticus 40B]
 gi|91188712|gb|EAS75000.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           alginolyticus 12G01]
 gi|262337473|gb|ACY51268.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           sp. Ex25]
 gi|269828326|gb|EEZ82592.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           alginolyticus 40B]
          Length = 377

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +IN ++            +E +Q    +  EA   E  +A      G 
Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFTFMQIAEEAKQDCFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   + + T NP PW++
Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATTNPIPWIN 338


>gi|494379|pdb|1MRR|A Chain A, Substitution Of Manganese For Iron In Ribonucleotide
           Reductase From Escherichia Coli. Spectroscopic And
           Crystallographic Characterization
 gi|494380|pdb|1MRR|B Chain B, Substitution Of Manganese For Iron In Ribonucleotide
           Reductase From Escherichia Coli. Spectroscopic And
           Crystallographic Characterization
 gi|494553|pdb|1RIB|A Chain A, Structure And Function Of The Escherichia Coli
           Ribonucleotide Reductase Protein R2
 gi|494554|pdb|1RIB|B Chain B, Structure And Function Of The Escherichia Coli
           Ribonucleotide Reductase Protein R2
          Length = 375

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F    NP PW++
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWIN 336


>gi|33358114|pdb|1PIM|A Chain A, Dithionite Reduced E. Coli Ribonucleotide Reductase R2
           Subunit, D84e Mutant
 gi|33358115|pdb|1PIM|B Chain B, Dithionite Reduced E. Coli Ribonucleotide Reductase R2
           Subunit, D84e Mutant
 gi|33358116|pdb|1PIU|A Chain A, Oxidized Ribonucleotide Reductase R2-D84e Mutant
           Containing Oxo-Bridged Diferric Cluster
 gi|33358117|pdb|1PIU|B Chain B, Oxidized Ribonucleotide Reductase R2-D84e Mutant
           Containing Oxo-Bridged Diferric Cluster
 gi|42543285|pdb|1PIZ|A Chain A, Ribonucleotide Reductase R2 D84e Mutant Soaked With
           Ferrous Ions At Neutral Ph
 gi|42543286|pdb|1PIZ|B Chain B, Ribonucleotide Reductase R2 D84e Mutant Soaked With
           Ferrous Ions At Neutral Ph
          Length = 375

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F    NP PW++
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWIN 336


>gi|42543287|pdb|1PJ0|A Chain A, Ribonucleotide Reductase R2-D84eW48F MUTANT SOAKED WITH
           Ferrous Ions At Neutral Ph
 gi|42543288|pdb|1PJ0|B Chain B, Ribonucleotide Reductase R2-D84eW48F MUTANT SOAKED WITH
           Ferrous Ions At Neutral Ph
 gi|42543289|pdb|1PJ1|A Chain A, Ribonucleotide Reductase R2-D84eW48F SOAKED WITH FERROUS
           Ions At Ph 5
 gi|42543290|pdb|1PJ1|B Chain B, Ribonucleotide Reductase R2-D84eW48F SOAKED WITH FERROUS
           Ions At Ph 5
          Length = 375

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F    NP PW++
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWIN 336


>gi|113200701|ref|YP_717864.1| ribonucleotide reductase subunit B [Synechococcus phage syn9]
 gi|76574600|gb|ABA47165.1| ribonucleotide reductase subunit B [Synechococcus phage syn9]
          Length = 387

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVINQIK-IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           RDE+ HL    +++N+ +  ++P +    KE +     M       E  +A      G  
Sbjct: 247 RDENQHLVITQNILNKWREGDDPEMAIIAKEEEVNVVDMFKRTVNEEKRWADYLFKDGSM 306

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114
           +GLN      Y+++IANRR   IGL+P++      NP PW    ++ K ++N   ET + 
Sbjct: 307 IGLNDRLLHNYVEWIANRRMKAIGLKPIYDIPAKNNPLPWTEHWLNSKGQQNAPQETEIE 366

Query: 115 EYQQGA 120
            Y  G 
Sbjct: 367 SYVVGG 372


>gi|328474726|gb|EGF45531.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           parahaemolyticus 10329]
          Length = 377

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +IN ++            +E +Q    +  EA   E  +A      G 
Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFSFMQIAEEAKQDCFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   + + T NP PW++
Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATTNPIPWIN 338


>gi|42543295|pdb|1PM2|A Chain A, Crystal Structure Of Manganese Substituted R2-D84e (D84e
           Mutant Of The R2 Subunit Of E. Coli Ribonucleotide
           Reductase)
 gi|42543296|pdb|1PM2|B Chain B, Crystal Structure Of Manganese Substituted R2-D84e (D84e
           Mutant Of The R2 Subunit Of E. Coli Ribonucleotide
           Reductase)
          Length = 339

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F    NP PW++
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWIN 336


>gi|28898709|ref|NP_798314.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|153839553|ref|ZP_01992220.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AQ3810]
 gi|260363692|ref|ZP_05776476.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus K5030]
 gi|260879741|ref|ZP_05892096.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AN-5034]
 gi|260898785|ref|ZP_05907226.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus Peru-466]
 gi|260901598|ref|ZP_05909993.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AQ4037]
 gi|28806927|dbj|BAC60198.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|149746934|gb|EDM57922.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AQ3810]
 gi|308086689|gb|EFO36384.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus Peru-466]
 gi|308093260|gb|EFO42955.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AN-5034]
 gi|308108691|gb|EFO46231.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AQ4037]
 gi|308113401|gb|EFO50941.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus K5030]
          Length = 377

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +IN ++            +E +Q    +  EA   E  +A      G 
Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFSFMQIAEEAKQDCFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   + + T NP PW++
Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATTNPIPWIN 338


>gi|212635281|ref|YP_002311806.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           piezotolerans WP3]
 gi|212556765|gb|ACJ29219.1| Ribonucleoside-diphosphate reductase, beta subunit [Shewanella
           piezotolerans WP3]
          Length = 376

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 5/100 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    ++  +    ++P +    KE +Q +  +  +A   E  +A      G 
Sbjct: 237 RDEALHLNSTQHILKIMHAGKDDPEMAEIAKECEQTAIDIFVKAAEQEKEWAKYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
            +GLN     QY+++I N R   + LE  +    NP PWM
Sbjct: 297 MIGLNEQILCQYVEYITNERMKAVNLESPYAEQSNPLPWM 336


>gi|238797463|ref|ZP_04640962.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           mollaretii ATCC 43969]
 gi|238718734|gb|EEQ10551.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           mollaretii ATCC 43969]
          Length = 376

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHIINLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F    NP PW++
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGVPFNTRTNPIPWIN 337


>gi|262274472|ref|ZP_06052283.1| ribonucleotide reductase of class Ia (aerobic) beta subunit
           [Grimontia hollisae CIP 101886]
 gi|262221035|gb|EEY72349.1| ribonucleotide reductase of class Ia (aerobic) beta subunit
           [Grimontia hollisae CIP 101886]
          Length = 360

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    KE +Q    +   A   E  +A      G 
Sbjct: 220 RDEALHLTSTQHMLNILRSGDDDPEMAEIAKECEQVCFDLFKNAAEQEKEWAEYLFKDGS 279

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL+P ++   +NP PW++
Sbjct: 280 MIGLNKDILCQYVEYITNLRMAAVGLKPAYQGANQNPIPWIN 321


>gi|262165506|ref|ZP_06033243.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           mimicus VM223]
 gi|262025222|gb|EEY43890.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           mimicus VM223]
          Length = 377

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++            +E +Q+S  +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMINILRNGMDDFTFLQVAEECKQESFDLFKQAAEQEKEWASYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GLEP +     NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAAVNNPIPWIN 338


>gi|238761950|ref|ZP_04622923.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           kristensenii ATCC 33638]
 gi|238699678|gb|EEP92422.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           kristensenii ATCC 33638]
          Length = 400

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 261 RDEALHLTGTQHIINLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 320

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F    NP PW++
Sbjct: 321 MIGLNKEILCQYVEYITNIRMQAVGLGVPFNTRTNPIPWIN 361


>gi|262171721|ref|ZP_06039399.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           mimicus MB-451]
 gi|261892797|gb|EEY38783.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           mimicus MB-451]
          Length = 377

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++            +E +Q+S  +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMINILRNGMDDFTFLQVAEECKQESFDLFKQAAEQEKEWASYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GLEP +     NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAAVNNPIPWIN 338


>gi|238751211|ref|ZP_04612705.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           rohdei ATCC 43380]
 gi|238710485|gb|EEQ02709.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           rohdei ATCC 43380]
          Length = 399

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E  +A      G 
Sbjct: 260 RDEALHLTGTQHILNLMRSGEDDPEMAEIAVECQQQCYDLFVLAAEQEKEWAEYLFRDGS 319

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   FK   NP PW++
Sbjct: 320 MIGLNKEILCQYVEYITNIRMQAVGLGTPFKTRTNPIPWIN 360


>gi|309379219|emb|CBX22176.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 384

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    +E Q++   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDPEMAEIAEELQEECFKLFKKAAEQEKEWAAYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 345


>gi|221105497|ref|XP_002169241.1| PREDICTED: similar to ribonucleoside-diphosphate reductase small
           chain [Hydra magnipapillata]
          Length = 363

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           +DE +H  FG  +   I      ++   F++    M  EA  +  ++  + +    +G+N
Sbjct: 236 KDEGMHTIFGCVIYTFI------IYRLSFEEICELM-KEAVEICKSFTKDAICVDMIGMN 288

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENP--FPWMSEVIDLKKEKNFFETRVTEYQQG 119
                 Y++++A+R    +G E +F  T+ P  F +M  +  L K+ NFFE R TEYQ+ 
Sbjct: 289 VELMYNYIEYVADRLMVYLGYEKIF-MTKIPDQFQFMDTIGFLNKD-NFFERRATEYQKA 346


>gi|253989035|ref|YP_003040391.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|211638141|emb|CAR66767.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotid
           reductase 1) (b2 protein) (r2 protein) [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253780485|emb|CAQ83647.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotid
           reductase 1) (b2 protein) (r2 protein) [Photorhabdus
           asymbiotica]
          Length = 376

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E +Q+   +  +A   E  +A     +G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIANECEQQCYDLFVQAAEQEKEWADYLFSEGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNRDILCQYVEYITNIRMQAVGLKLPFETRSNPIPWIN 337


>gi|126174279|ref|YP_001050428.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           baltica OS155]
 gi|125997484|gb|ABN61559.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella baltica OS155]
          Length = 376

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 5/100 (5%)

Query: 2   RDESLHLNFG--IDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    I  I Q   ++P +     E QQ++  +  +A   E  +A      G 
Sbjct: 237 RDEALHLNSTQHILSIMQGGKDDPEMGEIAAECQQEAFDLFFKAAEQEKEWAKYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
            +GLN     QY++FI N+R   + L   +    NP PWM
Sbjct: 297 MIGLNEQILCQYVEFITNQRMKSVNLPQPYLEITNPLPWM 336


>gi|293401949|ref|ZP_06646089.1| ribonucleoside-diphosphate reductase, beta subunit
           [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291304607|gb|EFE45856.1| ribonucleoside-diphosphate reductase, beta subunit
           [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 347

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L+T    ++ + ML      EI +    +     GL 
Sbjct: 219 RDENTHLWLFRSMILELQKEEPQLFTPALVEEYKDMLRYGVEEEIRWGSYVIGNDIEGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                +Y+ ++ N R   +G   L++ Y + P    W+S   +    K +FFE R + Y 
Sbjct: 279 MQMVREYIYYLGNLRSTSLGFGTLYEGYEKEPASMEWVSMYANANLIKTDFFEARSSAYA 338

Query: 118 QGAEL 122
           + + L
Sbjct: 339 KSSAL 343


>gi|149911236|ref|ZP_01899859.1| ribonucleotide-diphosphate reductase beta subunit [Moritella sp.
           PE36]
 gi|149805690|gb|EDM65689.1| ribonucleotide-diphosphate reductase beta subunit [Moritella sp.
           PE36]
          Length = 376

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +   + E  Q+++ +  +A   E  +A      G 
Sbjct: 237 RDEALHLTSTQHILNLMADGKDDPEMQEISIECFQETQKIFTDAAQQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN      Y+++I N R   +GL   F+   NP PW++
Sbjct: 297 MIGLNKDILSDYIEYITNTRMAAVGLPKAFEVKSNPLPWIN 337


>gi|258620211|ref|ZP_05715250.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus
           VM573]
 gi|258587569|gb|EEW12279.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus
           VM573]
          Length = 381

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++            +E +Q+S  +  +A   E  +A      G 
Sbjct: 241 RDEALHLTGTQHMINILRNGMDDFTFLQVAEECKQESFDLFKQAAEQEKEWASYLFKDGS 300

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GLEP +     NP PW++
Sbjct: 301 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAAVNNPIPWIN 342


>gi|258624428|ref|ZP_05719375.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus
           VM603]
 gi|258583275|gb|EEW08077.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus
           VM603]
          Length = 381

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++            +E +Q+S  +  +A   E  +A      G 
Sbjct: 241 RDEALHLTGTQHMINILRNGMDDFTFLQVAEECKQESFDLFKQAAEQEKEWASYLFKDGS 300

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GLEP +     NP PW++
Sbjct: 301 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAAVNNPIPWIN 342


>gi|284799957|ref|ZP_05985309.2| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           subflava NJ9703]
 gi|284796454|gb|EFC51801.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           subflava NJ9703]
          Length = 377

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTSTQHMLNLMRAGADDPEMAEIANELQDECFNLFKKAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+  T+NP PW++
Sbjct: 297 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWIN 338


>gi|172054963|ref|YP_001806290.1| ribonucleoside-diphosphate reductase subunit beta [Cyanothece sp.
           ATCC 51142]
 gi|171701244|gb|ACB54224.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp.
           ATCC 51142]
          Length = 347

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%)

Query: 45  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVID 101
           EI + +       +G++  S E Y +++AN R   IG+  ++   ENP+    W      
Sbjct: 259 EIEWTNHIFDGQILGVSEASTEAYTKYLANLRLKAIGISAIYPEVENPYAHLDWADFKGI 318

Query: 102 LKKEKNFFETRVTEYQQGAELK 123
            K +  FFET VT Y Q   +K
Sbjct: 319 GKSKAAFFETEVTGYAQPTAVK 340


>gi|268591162|ref|ZP_06125383.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rettgeri DSM 1131]
 gi|291313388|gb|EFE53841.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rettgeri DSM 1131]
          Length = 378

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E +Q+   +  +A   E  +A     +G 
Sbjct: 239 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEQECYDLFVQAAEQEKEWADYLFSEGS 298

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 299 MIGLNKDILCQYVEYITNIRMQAVGLKLPFETRSNPIPWIN 339


>gi|238753722|ref|ZP_04615083.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           ruckeri ATCC 29473]
 gi|238707958|gb|EEQ00315.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           ruckeri ATCC 29473]
          Length = 376

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLMRSGEDDPEMAEIAVECQQQCYDLFVLAAEQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   FK   NP PW++
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGTPFKTRTNPIPWIN 337


>gi|225075859|ref|ZP_03719058.1| hypothetical protein NEIFLAOT_00882 [Neisseria flavescens
           NRL30031/H210]
 gi|224952805|gb|EEG34014.1| hypothetical protein NEIFLAOT_00882 [Neisseria flavescens
           NRL30031/H210]
          Length = 388

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E  +A      G 
Sbjct: 248 RDEALHLTSTQHMLNLMRAGADDPEMAEIANELQDECFNLFKKAAEQEKEWAAYLFKDGS 307

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+  T+NP PW++
Sbjct: 308 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWIN 349


>gi|117920413|ref|YP_869605.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp.
           ANA-3]
 gi|117612745|gb|ABK48199.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella sp. ANA-3]
          Length = 391

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 5/100 (5%)

Query: 2   RDESLHLNFG--IDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    I  I Q   ++P +     E QQ++  +  +A   E  +A      G 
Sbjct: 252 RDEALHLNSTQHILTIMQGGKDDPEMAEIAAECQQEAYNLFLKAAEQEKEWAKYLFKDGS 311

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
            +GLN     QY+++I N+R   + L   +    NP PWM
Sbjct: 312 MIGLNEQILCQYVEYITNQRMKSVNLPLPYAELSNPLPWM 351


>gi|317164437|gb|ADV07978.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae TCDC-NG08107]
          Length = 377

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +     E Q +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLSAGFEGANQNPIPWIN 338


>gi|121730673|ref|ZP_01682814.1| ATP-dependent Zn proteases [Vibrio cholerae V52]
 gi|121627739|gb|EAX60372.1| ATP-dependent Zn proteases [Vibrio cholerae V52]
          Length = 129

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)

Query: 27 TKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPL 85
           +E +Q+S  +  EA   E  +A      G  +GLN     QY+++I N R   +GLEP 
Sbjct: 18 AEECKQESFDLFKEAAEQEKEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLEPA 77

Query: 86 F-KYTENPFPWMS 97
          +   T NP PW++
Sbjct: 78 YPAATNNPIPWIN 90


>gi|319638203|ref|ZP_07992966.1| ribonucleoside diphosphate reductase subunit I beta [Neisseria
           mucosa C102]
 gi|317400476|gb|EFV81134.1| ribonucleoside diphosphate reductase subunit I beta [Neisseria
           mucosa C102]
          Length = 384

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTSTQHMLNLMRAGADDPEMAEIANELQDECFNLFKKAAEQEKEWAAYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+  T+NP PW++
Sbjct: 304 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWIN 345


>gi|9629745|ref|NP_045237.1| ribonucleotide reductase subunit 2 [Equid herpesvirus 4]
 gi|2605963|gb|AAC59535.1| 20 [Equid herpesvirus 4]
          Length = 320

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 12/120 (10%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLH----EATLLEIAYAHETMPKGF 57
           RDE++H N    + N         +   F++ + T ++    EA  +E  +     PK  
Sbjct: 202 RDEAIHTNASCCIYNN--------YLGGFEKPAPTRIYALFSEAVNIECEFLLSHAPKST 253

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
             L+  +   Y+++ A+R   +IGL PLF   + P  +    + ++K  NFFE R T Y 
Sbjct: 254 HLLDIEAIICYVRYSADRLLGEIGLSPLFNAPKPPPSFPLAFMTVEKHTNFFERRSTAYS 313


>gi|311977695|ref|YP_003986815.1| ribonucleoside-diphosphate reductase small chain [Acanthamoeba
           polyphaga mimivirus]
 gi|77416594|sp|Q7T6Y9|RIR2_MIMIV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|55664859|gb|AAQ09571.2| ribonucleotide reductase small subunit [Acanthamoeba polyphaga
           mimivirus]
 gi|308204332|gb|ADO18133.1| ribonucleoside-diphosphate reductase small chain [Acanthamoeba
           polyphaga mimivirus]
          Length = 417

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 2/70 (2%)

Query: 50  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 109
           ++++P   +G+N+    QY++++A+R    +G    F   +NPF +M + ID+  + NFF
Sbjct: 336 NDSLPCKLLGMNSELMSQYIKYVADRLLVDLGYRKKFN-VDNPFEYMKK-IDVFVKANFF 393

Query: 110 ETRVTEYQQG 119
           E R   Y   
Sbjct: 394 EKRNDAYSNA 403


>gi|51557509|ref|YP_068343.1| ribonucleotide reductase subunit 2 [Suid herpesvirus 1]
 gi|1710400|sp|P50645|RIR2_SUHVK RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|437737|emb|CAA50977.1| ribonucleotide reductase [Suid herpesvirus 1]
 gi|525265|emb|CAA56776.1| ribonucleotid reductase, small subunit [Suid herpesvirus 1]
 gi|40253968|tpg|DAA02163.1| TPA_exp: small subunit of ribonucleotide reductase [Suid
           herpesvirus 1]
 gi|1090510|prf||2019240B ribonucleotide reductase:SUBUNIT=small
          Length = 303

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 4/115 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H +    + N    + P        Q    +  EA  +E  +     P+  + L+
Sbjct: 185 RDEAIHTSASCCIYNNYLGDAPRPDEARIHQ----LFAEAVEIECEFLRARAPRDSLLLD 240

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
            P+   Y+++ A+R    IG  PLF        +   ++  +K  NFFE R T Y
Sbjct: 241 LPAIISYVRYSADRLLQAIGASPLFGAPAPAADFPMALMVAEKHTNFFERRSTNY 295


>gi|269963956|ref|ZP_06178265.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio harveyi
           1DA3]
 gi|269831299|gb|EEZ85449.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio harveyi
           1DA3]
          Length = 377

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +IN ++            +E +Q    +  EA   E  +A      G 
Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFTFMQIAEEAKQDCFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   + + T NP PW++
Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPMAYPEATSNPIPWIN 338


>gi|294625675|ref|ZP_06704297.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 11122]
 gi|294664800|ref|ZP_06730124.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 10535]
 gi|292600044|gb|EFF44159.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 11122]
 gi|292605431|gb|EFF48758.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 10535]
          Length = 347

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  EN  L   +           A  LE  +  E +  G  G++
Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L++   +N  PW+    D   + + +FFE R   Y++
Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337


>gi|1710396|sp|P50644|RIR2_EHV4 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|515833|emb|CAA53101.1| ribonucleoside-diphosphate reductase [Equid herpesvirus 4]
          Length = 320

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 12/120 (10%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLH----EATLLEIAYAHETMPKGF 57
           RDE++H N    + N         +   F++ + T ++    EA  +E  +     PK  
Sbjct: 202 RDEAIHTNASCCIYNN--------YLGGFEKPAPTRIYALFSEAVNIECEFLLSHAPKSS 253

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
             L+  +   Y+++ A+R   +IGL PLF   + P  +    + ++K  NFFE R T Y 
Sbjct: 254 HLLDIEAIICYVRYSADRLLGEIGLSPLFNAPKPPPSFPLAFMTVEKHTNFFERRSTAYS 313


>gi|289670858|ref|ZP_06491933.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. musacearum NCPPB4381]
          Length = 349

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  EN  L   +           A  LE  +  E +  G  G++
Sbjct: 221 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L++   +N  PW+    D   + + +FFE R   Y++
Sbjct: 280 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 339


>gi|261867684|ref|YP_003255606.1| ribonucleotide-diphosphate reductase subunit beta [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413016|gb|ACX82387.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 376

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQEKDWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWIN 337


>gi|156933156|ref|YP_001437072.1| ribonucleotide-diphosphate reductase subunit beta [Cronobacter
           sakazakii ATCC BAA-894]
 gi|156531410|gb|ABU76236.1| hypothetical protein ESA_00966 [Cronobacter sakazakii ATCC BAA-894]
          Length = 376

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGEDDPEMAAIAEECKQECYDLFVLAAQQEKEWAEYLFQGGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  FK   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFKTRSNPIPWIN 337


>gi|293392273|ref|ZP_06636607.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290952807|gb|EFE02926.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 376

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAKIAEECKQEAYDLFLAAAEQEKDWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWIN 337


>gi|91793308|ref|YP_562959.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           denitrificans OS217]
 gi|91715310|gb|ABE55236.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella denitrificans OS217]
          Length = 376

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 5/100 (5%)

Query: 2   RDESLHLNFG--IDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    I  + Q   ++P +     E QQ++  + ++A   E  +A      G 
Sbjct: 237 RDEALHLNSTQHILALMQGGKDDPEMAEIAIECQQQAYDLFYKAAEQEKEWAKYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
            +GLN     QY+++I N+R   + L   +    NP PWM
Sbjct: 297 MIGLNEQILCQYVEYITNQRMKSVHLPQPYAEISNPLPWM 336


>gi|85711601|ref|ZP_01042658.1| ribonucleotide-diphosphate reductase beta subunit [Idiomarina
           baltica OS145]
 gi|85694461|gb|EAQ32402.1| ribonucleotide-diphosphate reductase beta subunit [Idiomarina
           baltica OS145]
          Length = 377

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 6/105 (5%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE++HL     +IN  Q   ++P +    +E   ++  +   A   E  +AH     G 
Sbjct: 237 RDENVHLTSTQHMINLWQDGEDDPEMAEIAEELADEAYEIFMTAVKQEKQWAHYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVI 100
            +GLN     QY+++IAN R   IG + P  +   NP PWM++ +
Sbjct: 297 MIGLNESMLCQYVEYIANLRMQAIGYDAPFPEQRSNPLPWMNKYL 341


>gi|329298015|ref|ZP_08255351.1| ribonucleotide-diphosphate reductase subunit beta [Plautia stali
           symbiont]
          Length = 376

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT----MLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++        KE   + R     +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRTGEDDPEMKEIAAECRDECFDLFKKAAEQEKEWAEYLFSGGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|260598671|ref|YP_003211242.1| ribonucleotide-diphosphate reductase subunit beta [Cronobacter
           turicensis z3032]
 gi|260217848|emb|CBA32365.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Cronobacter
           turicensis z3032]
          Length = 376

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGEDDPEMAIIAEECKQECYDLFVLAAQQEKEWAEYLFQGGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  FK   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFKTRSNPIPWIN 337


>gi|317048919|ref|YP_004116567.1| ribonucleoside-diphosphate reductase [Pantoea sp. At-9b]
 gi|316950536|gb|ADU70011.1| Ribonucleoside-diphosphate reductase [Pantoea sp. At-9b]
          Length = 376

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT----MLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++        KE   + R     +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRTGEDDPEMKEIAAECRDECYDLFKKAAEQEKEWAEYLFSGGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|76875271|emb|CAI86492.1| ribonucleoside-diphosphate reductase 1, beta subunit
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 359

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHLWTKEFQQKSRT--MLHEATLLEIAYAHETMPKG- 56
           RDE+LHL+    ++N  Q   ++P +     Q +     M  +A   E  +A      G 
Sbjct: 220 RDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCRDEAIKMFVDAAEQEKEWAEYLFKDGS 279

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   IG    FK   NP PW++
Sbjct: 280 MIGLNKHILCQYVEYITNARMTAIGFPAQFKNNSNPIPWIN 320


>gi|269213593|ref|ZP_05982340.2| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           cinerea ATCC 14685]
 gi|269146056|gb|EEZ72474.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           cinerea ATCC 14685]
          Length = 377

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    +E Q++   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTSTQHMLNLMRSGVDDPEMAEIAEELQEECFKLFKKAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPIGFEGANQNPIPWIN 338


>gi|162139926|ref|YP_339935.2| ribonucleotide-diphosphate reductase subunit beta
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 376

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHLWTKEFQQKSRT--MLHEATLLEIAYAHETMPKG- 56
           RDE+LHL+    ++N  Q   ++P +     Q +     M  +A   E  +A      G 
Sbjct: 237 RDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCRDEAIKMFVDAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   IG    FK   NP PW++
Sbjct: 297 MIGLNKHILCQYVEYITNARMTAIGFPAQFKNNSNPIPWIN 337


>gi|251792451|ref|YP_003007177.1| ribonucleotide-diphosphate reductase subunit beta [Aggregatibacter
           aphrophilus NJ8700]
 gi|315634378|ref|ZP_07889665.1| ribonucleotide-diphosphate reductase beta subunit [Aggregatibacter
           segnis ATCC 33393]
 gi|247533844|gb|ACS97090.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           aphrophilus NJ8700]
 gi|315476968|gb|EFU67713.1| ribonucleotide-diphosphate reductase beta subunit [Aggregatibacter
           segnis ATCC 33393]
          Length = 376

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQEKDWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWIN 337


>gi|117530173|ref|YP_851016.1| ribonucleoside-diphosphate reductase beta subunit [Microcystis
           phage Ma-LMM01]
 gi|86990305|dbj|BAE79256.1| ribonucleoside-diphosphate reductase beta subunit [Microcystis
           phage Ma-LMM01]
 gi|117165785|dbj|BAF36093.1| ribonucleoside-diphosphate reductase beta subunit [Microcystis
           phage Ma-LMM01]
 gi|124270949|dbj|BAF45776.1| ribonucleoside-diphosphate reductase beta subunit [Cyanophage
           Ma-LMM02]
 gi|124270951|dbj|BAF45777.1| ribonucleoside-diphosphate reductase beta subunit [Cyanophage
           Ma-LMM03]
 gi|124270953|dbj|BAF45778.1| ribonucleoside-diphosphate reductase beta subunit [Cyanophage
           Ma-HPM05]
          Length = 348

 Score = 43.9 bits (102), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 15/134 (11%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I     E   +W  +   +   +  +A   EI +    +  G  G+N
Sbjct: 218 RDEQTHLKLISNIIRTGLAEGTLMWDTD---EIIDLFRKAAEYEIEWGLH-IGLGVNGIN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVI-----DLKKEKNFFETRV 113
           A + EQY +++ N R   IGL  +F   +Y+ NP+  +         D     NFFE+ V
Sbjct: 274 ATTIEQYAKYLCNIRARAIGLPTVFEGRQYSRNPYAHLERFAATTGEDSITRDNFFESGV 333

Query: 114 TEYQQGAEL--KWD 125
             Y+  A++   WD
Sbjct: 334 I-YRNPAKVVDGWD 346


>gi|113461104|ref|YP_719172.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           somnus 129PT]
 gi|170717681|ref|YP_001784756.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           somnus 2336]
 gi|112823147|gb|ABI25236.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Haemophilus somnus 129PT]
 gi|168825810|gb|ACA31181.1| Ribonucleoside-diphosphate reductase [Haemophilus somnus 2336]
          Length = 376

 Score = 43.9 bits (102), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYELFVAAAEQEKEWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWIN 337


>gi|89074073|ref|ZP_01160574.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           sp. SKA34]
 gi|89050211|gb|EAR55722.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           sp. SKA34]
          Length = 377

 Score = 43.9 bits (102), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E +Q    +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLLRNGHDDPEMVEIATECEQDCFDLFKAAAEQEKEWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL P ++  T+NP PW++
Sbjct: 297 MIGLNKQILCQYVEYITNLRMVAVGLRPAYEGATQNPIPWIN 338


>gi|332534563|ref|ZP_08410398.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035983|gb|EGI72462.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 376

 Score = 43.9 bits (102), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHLWTKEFQQKSRT--MLHEATLLEIAYAHETMPKG- 56
           RDE+LHL+    ++N  Q   ++P +     Q +     M  +A   E  +A      G 
Sbjct: 237 RDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCRDEAIKMFVDAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   IGL   F+   NP PW++
Sbjct: 297 MIGLNKHILCQYVEYITNARMTAIGLPAQFENNSNPIPWIN 337


>gi|261400675|ref|ZP_05986800.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           lactamica ATCC 23970]
 gi|269209585|gb|EEZ76040.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           lactamica ATCC 23970]
          Length = 377

 Score = 43.9 bits (102), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +     E Q +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTSTQHMLNLMRSGVDDPEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 338


>gi|315126539|ref|YP_004068542.1| ribonucleotide-diphosphate reductase subunit beta
           [Pseudoalteromonas sp. SM9913]
 gi|315015053|gb|ADT68391.1| ribonucleotide-diphosphate reductase subunit beta
           [Pseudoalteromonas sp. SM9913]
          Length = 376

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHLWTKEFQ--QKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL+    ++N  Q   ++P +     Q  +++  M  +A   E  +A      G 
Sbjct: 237 RDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCREEAIKMFVDAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   IGL   F    NP PW++
Sbjct: 297 MIGLNKHILCQYVEYITNARMTAIGLPAQFDNNSNPIPWIN 337


>gi|284009345|emb|CBA76525.1| ribonucleoside-diphosphate reductase 1, beta subunit [Arsenophonus
           nasoniae]
          Length = 378

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    KE ++    +  +A   E  +A      G 
Sbjct: 239 RDEALHLTGTQHMLNLMRSGQDDPEMAIIAKECEEACYRLFVQAAEQEKEWAEYLFSGGS 298

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 299 MIGLNKDILCQYIEYITNIRMQAVGLKLPFETRSNPIPWIN 339


>gi|90412217|ref|ZP_01220223.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           profundum 3TCK]
 gi|90326941|gb|EAS43326.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           profundum 3TCK]
          Length = 377

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+   +  EA   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLLRGRHDDPEMADIAQECQQECFEIFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  +    +NP PW++
Sbjct: 297 MIGLNKEILCQYVEYITNLRMKAVGLDQAYPGANQNPIPWIN 338


>gi|161572976|ref|YP_207754.2| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae FA 1090]
 gi|194098862|ref|YP_002001926.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae NCCP11945]
 gi|239999147|ref|ZP_04719071.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae 35/02]
 gi|240013945|ref|ZP_04720858.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae DGI18]
 gi|240016387|ref|ZP_04722927.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae FA6140]
 gi|240080506|ref|ZP_04725049.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae FA19]
 gi|240113126|ref|ZP_04727616.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae MS11]
 gi|240115882|ref|ZP_04729944.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae PID18]
 gi|240118180|ref|ZP_04732242.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae PID1]
 gi|240121514|ref|ZP_04734476.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae PID24-1]
 gi|240123728|ref|ZP_04736684.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae PID332]
 gi|240125919|ref|ZP_04738805.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae SK-92-679]
 gi|240128431|ref|ZP_04741092.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae SK-93-1035]
 gi|193934152|gb|ACF29976.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae NCCP11945]
          Length = 377

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +     E Q +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 338


>gi|24373963|ref|NP_718006.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           oneidensis MR-1]
 gi|24348405|gb|AAN55450.1|AE015682_5 ribonucleoside-diphosphate reductase, beta subunit [Shewanella
           oneidensis MR-1]
          Length = 376

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 5/100 (5%)

Query: 2   RDESLHLNFG--IDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    I  I Q   ++P +     E QQ++  +  +A   E  +A      G 
Sbjct: 237 RDEALHLNSTQHILTIMQGGKDDPEMGEIAIECQQEAYNLFLKAAEQEKEWAKYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
            +GLN     QY+++I N+R   + L   +    NP PWM
Sbjct: 297 MIGLNEQILCQYVEYITNQRMKSVNLPQPYAEQTNPLPWM 336


>gi|270262779|ref|ZP_06191050.1| ribonucleoside-diphosphate reductase 1 subunit beta [Serratia
           odorifera 4Rx13]
 gi|270043463|gb|EFA16556.1| ribonucleoside-diphosphate reductase 1 subunit beta [Serratia
           odorifera 4Rx13]
          Length = 359

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E  +A      G 
Sbjct: 220 RDEALHLTGTQHILNLMRSGADDPEMAEIAVECQQQCYDLFVLAAQQEKEWAEYLFRDGS 279

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 280 MIGLNKDILCQYVEYITNIRMQAVGLGLPFETRSNPIPWIN 320


>gi|212638239|ref|YP_002314759.1| ribonucleotide-diphosphate reductase subunit beta [Anoxybacillus
           flavithermus WK1]
 gi|212559719|gb|ACJ32774.1| Ribonucleotide reductase, beta subunit [Anoxybacillus flavithermus
           WK1]
          Length = 345

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 58/126 (46%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL-WTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +DE  H  F   ++  +  ENP +     F       + EA   E  ++   + +   G+
Sbjct: 216 KDELCHSYFISQLVRAVLWENPQIDENGAFSAWIYDYIDEAIRYETEWSRFVL-RDIDGI 274

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM----SEVIDLKKEKNFFETRVTEY 116
           +    E+Y++++ N+R   +GL+  +   EN  PW+     E ++L K  +FFE R   Y
Sbjct: 275 DVIEMEKYIEYLGNKRLRMLGLDDRYDADENSMPWIRVFSDENVNLGK-TDFFEARPRSY 333

Query: 117 QQGAEL 122
            +  ++
Sbjct: 334 TKTTDV 339


>gi|149190928|ref|ZP_01869191.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio shilonii
           AK1]
 gi|148835283|gb|EDL52257.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio shilonii
           AK1]
          Length = 377

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++            +E +Q    +  EA   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQDCFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I+N R   +GL+  + + T NP PW++
Sbjct: 297 MIGLNKDILCQYVEYISNVRMQAVGLDAAYPEATSNPIPWIN 338


>gi|90581239|ref|ZP_01237037.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio angustum
           S14]
 gi|90437610|gb|EAS62803.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio angustum
           S14]
          Length = 377

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E +Q+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLLRNGHDDPEMAEIAAECEQECFDIFKAAAEQEKEWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL P +   T+NP PW++
Sbjct: 297 MIGLNKQILCQYVEYITNLRMVAVGLRPAYDGATQNPIPWIN 338


>gi|15602584|ref|NP_245656.1| ribonucleotide-diphosphate reductase subunit beta [Pasteurella
           multocida subsp. multocida str. Pm70]
 gi|12721013|gb|AAK02803.1| NrdB [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 376

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNIMASGQDDPEMAEIVEECKQEAYDLFVAAAEQEKEWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWIN 337


>gi|119472403|ref|ZP_01614521.1| ribonucleotide-diphosphate reductase beta subunit [Alteromonadales
           bacterium TW-7]
 gi|119444925|gb|EAW26223.1| ribonucleotide-diphosphate reductase beta subunit [Alteromonadales
           bacterium TW-7]
          Length = 376

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHLWTKEFQQKSRT--MLHEATLLEIAYAHETMPKG- 56
           RDE+LHL+    ++N  Q   ++P +     Q +     M  +A   E  +A      G 
Sbjct: 237 RDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCRDEAIKMFVQAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   IGL   F+   NP PW++
Sbjct: 297 MIGLNKHILCQYVEYITNARMTAIGLPAQFENNSNPIPWIN 337


>gi|93005945|ref|YP_580382.1| ribonucleotide-diphosphate reductase subunit beta [Psychrobacter
           cryohalolentis K5]
 gi|92393623|gb|ABE74898.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Psychrobacter cryohalolentis K5]
          Length = 377

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++I  ++P +    KE  ++S  +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLMRIGRDDPEMVDIAKECYEESIEIFRKAAEQEKEWAGYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS 97
            +GLN     QY+++I N R   +GL   F  ++ NP PW++
Sbjct: 297 MIGLNKDILCQYIEYITNLRMEAVGLPVAFPNSKSNPIPWIN 338


>gi|255065945|ref|ZP_05317800.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sicca
           ATCC 29256]
 gi|255049856|gb|EET45320.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sicca
           ATCC 29256]
          Length = 377

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTSTQHMLNLMRAGSDDPEMAEIAVELQDECFKLFKKAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+  T+NP PW++
Sbjct: 297 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWIN 338


>gi|254493923|ref|ZP_05107094.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae 1291]
 gi|260440303|ref|ZP_05794119.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae DGI2]
 gi|268594982|ref|ZP_06129149.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae 35/02]
 gi|268596639|ref|ZP_06130806.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae FA19]
 gi|268599210|ref|ZP_06133377.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae MS11]
 gi|268601557|ref|ZP_06135724.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID18]
 gi|268603896|ref|ZP_06138063.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID1]
 gi|268682359|ref|ZP_06149221.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID332]
 gi|268684517|ref|ZP_06151379.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae
           SK-92-679]
 gi|268686827|ref|ZP_06153689.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|291043595|ref|ZP_06569311.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae DGI2]
 gi|293398906|ref|ZP_06643071.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           gonorrhoeae F62]
 gi|59717937|gb|AAW89342.1| putative ribonucleoside diphosphate reductase I beta chain
           [Neisseria gonorrhoeae FA 1090]
 gi|226512963|gb|EEH62308.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae 1291]
 gi|268548371|gb|EEZ43789.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae 35/02]
 gi|268550427|gb|EEZ45446.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae FA19]
 gi|268583341|gb|EEZ48017.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae MS11]
 gi|268585688|gb|EEZ50364.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID18]
 gi|268588027|gb|EEZ52703.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID1]
 gi|268622643|gb|EEZ55043.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID332]
 gi|268624801|gb|EEZ57201.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae
           SK-92-679]
 gi|268627111|gb|EEZ59511.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|291012058|gb|EFE04047.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae DGI2]
 gi|291610320|gb|EFF39430.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           gonorrhoeae F62]
          Length = 384

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +     E Q +   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 345


>gi|313668429|ref|YP_004048713.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           lactamica ST-640]
 gi|313005891|emb|CBN87347.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           lactamica 020-06]
          Length = 377

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +     E Q +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFRLFKKAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 338


>gi|296103863|ref|YP_003614009.1| ribonucleotide-diphosphate reductase beta subunit [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295058322|gb|ADF63060.1| ribonucleotide-diphosphate reductase beta subunit [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 376

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVLAAQQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|325103985|ref|YP_004273639.1| ribonucleotide reductase [Pedobacter saltans DSM 12145]
 gi|324972833|gb|ADY51817.1| ribonucleotide reductase [Pedobacter saltans DSM 12145]
          Length = 324

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GLN 61
           DE LH N GI +IN+IK E P    +  +Q+   ++ E+  +E          G +  +N
Sbjct: 194 DEQLHANAGIYIINKIKEEFPEYIDEAVEQEIYDIVTESINIEDEILGWIFENGDLEHIN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                 +M++  +    QIG + L+  +E   +P  W  E I      +FF  R  EY +
Sbjct: 254 RRDLLNFMKYRIDVSLQQIGFKKLYNVSETEYSPMVWFEEEIFANSLDDFFAKRPVEYTK 313


>gi|241760495|ref|ZP_04758588.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           flavescens SK114]
 gi|241318999|gb|EER55501.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           flavescens SK114]
          Length = 377

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTSTQHMLNLMRAGADDPEMAEIAVELQDECFKLFKKAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+  T+NP PW++
Sbjct: 297 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWIN 338


>gi|59711808|ref|YP_204584.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio fischeri
           ES114]
 gi|197336251|ref|YP_002156001.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio fischeri
           MJ11]
 gi|59479909|gb|AAW85696.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Vibrio fischeri ES114]
 gi|197317741|gb|ACH67188.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio fischeri
           MJ11]
          Length = 377

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDESLHL     ++N ++   ++P       E +Q+   +   A   E  +A+     G 
Sbjct: 237 RDESLHLTSTQHMLNLLRTGQDDPEFVEIAAECEQECFDLFKAAAEQEKQWANYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL   ++  T+NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNLRMKAVGLNSAYEGATQNPIPWIN 338


>gi|260913913|ref|ZP_05920387.1| ribonucleoside-diphosphate reductase [Pasteurella dagmatis ATCC
           43325]
 gi|260632000|gb|EEX50177.1| ribonucleoside-diphosphate reductase [Pasteurella dagmatis ATCC
           43325]
          Length = 376

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNIMASGQDDPEMAEIVEECKQEAYDLFVAAAEQEKEWASYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWIN 337


>gi|332162349|ref|YP_004298926.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|318606422|emb|CBY27920.1| ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Yersinia enterocolitica subsp. palearctica Y11]
 gi|325666579|gb|ADZ43223.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330864218|emb|CBX74276.1| ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           enterocolitica W22703]
          Length = 376

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F    NP PW++
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGVPFNTRTNPIPWIN 337


>gi|325578589|ref|ZP_08148689.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           parainfluenzae ATCC 33392]
 gi|325159825|gb|EGC71955.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           parainfluenzae ATCC 33392]
          Length = 376

 Score = 43.5 bits (101), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQEKEWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F    NP PW++
Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFGARSNPIPWIN 337


>gi|301156451|emb|CBW15922.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Haemophilus parainfluenzae T3T1]
          Length = 376

 Score = 43.5 bits (101), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQEKEWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F    NP PW++
Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFGARSNPIPWIN 337


>gi|312885176|ref|ZP_07744856.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309367189|gb|EFP94761.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 377

 Score = 43.1 bits (100), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++            +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKDAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  + + T NP PW++
Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLDAAYPEATSNPIPWIN 338


>gi|298368555|ref|ZP_06979873.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sp.
           oral taxon 014 str. F0314]
 gi|298282558|gb|EFI24045.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sp.
           oral taxon 014 str. F0314]
          Length = 384

 Score = 43.1 bits (100), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTSTQHMLNLMRAGADDPEMAEIAVELQDECFKLFKKAAEQEKEWAAYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+  T+NP PW++
Sbjct: 304 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWIN 345


>gi|261868068|ref|YP_003255990.1| ribonucleoside-diphosphate reductase subunit beta [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|293389919|ref|ZP_06634253.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|261413400|gb|ACX82771.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|290950453|gb|EFE00572.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 329

 Score = 43.1 bits (100), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 4/121 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60
           ++E +H  FGI + + ++ E P L+T EF  + + +  +A   E A        G +  L
Sbjct: 198 KEEEIHGRFGISLYHLLREEQPELFTDEFYAELKELAEQAFNAEKAILDWIFEDGELSFL 257

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
           +  + E Y+    N     +GLEP++  +        W    I   KE +FF  R T+Y 
Sbjct: 258 SKATVENYIANRYNNSLVTLGLEPIYNISPAQLKETEWFDIEILSTKETDFFNKRSTDYS 317

Query: 118 Q 118
           +
Sbjct: 318 K 318


>gi|261364564|ref|ZP_05977447.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           mucosa ATCC 25996]
 gi|288567131|gb|EFC88691.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           mucosa ATCC 25996]
          Length = 384

 Score = 43.1 bits (100), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTSTQHMLNLMRAGSDDPEMAEIAVELQDECFELFKKAAEQEKEWAAYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+  T+NP PW++
Sbjct: 304 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWIN 345


>gi|294140834|ref|YP_003556812.1| ribonucleoside-diphosphate reductase subunit beta [Shewanella
           violacea DSS12]
 gi|293327303|dbj|BAJ02034.1| ribonucleoside-diphosphate reductase, beta subunit [Shewanella
           violacea DSS12]
          Length = 376

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 5/100 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    ++  ++   ++P +    KE +Q +  +  +A   E  +A      G 
Sbjct: 237 RDEALHLNSTQHILKIMRAGADDPEMGEIAKECEQLAYDIFVKAAEQEKEWAQYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
            +GLN     QY+++I N R   + L   +    NP PWM
Sbjct: 297 MIGLNQAILCQYVEYITNERMKSVNLPCHYDEITNPLPWM 336


>gi|269865122|ref|XP_002651812.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063829|gb|EED42244.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 336

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 9/103 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H +          ++ EA  +E  +  E++P   +G+N
Sbjct: 219 RDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMN 269

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 104
                QY++F+A+R    +G   ++ +  +   W + V   K+
Sbjct: 270 CKLMCQYIEFVADRLLFALGERKIYTFLTHSISWKTSVCKAKQ 312


>gi|4389291|pdb|1BIQ|A Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain Mutant
           E238a
          Length = 375

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RD +LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDAALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 336


>gi|4389292|pdb|1BIQ|B Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain Mutant
           E238a
 gi|40889714|pdb|1RSV|A Chain A, Azide Complex Of The Diferrous E238a Mutant R2 Subunit Of
           Ribonucleotide Reductase
 gi|40889715|pdb|1RSV|B Chain B, Azide Complex Of The Diferrous E238a Mutant R2 Subunit Of
           Ribonucleotide Reductase
          Length = 375

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RD +LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDAALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 336


>gi|123441721|ref|YP_001005705.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122088682|emb|CAL11484.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 376

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F    NP PW++
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGIPFNTRTNPIPWIN 337


>gi|27366311|ref|NP_761839.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           vulnificus CMCP6]
 gi|37679427|ref|NP_934036.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           vulnificus YJ016]
 gi|320156821|ref|YP_004189200.1| ribonucleotide reductase of class Ia (aerobic), subunit beta
           [Vibrio vulnificus MO6-24/O]
 gi|27362512|gb|AAO11366.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Vibrio vulnificus CMCP6]
 gi|37198171|dbj|BAC94007.1| ribonucleotide reductase, beta subunit [Vibrio vulnificus YJ016]
 gi|319932133|gb|ADV86997.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Vibrio vulnificus MO6-24/O]
          Length = 377

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +IN ++            +E +Q+   +  EA   E  +A      G 
Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFSFMQIAEEAKQQCFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   +   T NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPVAYPNATSNPIPWIN 338


>gi|251790602|ref|YP_003005323.1| ribonucleotide-diphosphate reductase subunit beta [Dickeya zeae
           Ech1591]
 gi|247539223|gb|ACT07844.1| ribonucleotide reductase [Dickeya zeae Ech1591]
          Length = 376

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRAGQDDPEMAQVAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFETRTNPIPWIN 337


>gi|238788616|ref|ZP_04632408.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           frederiksenii ATCC 33641]
 gi|238723211|gb|EEQ14859.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           frederiksenii ATCC 33641]
          Length = 383

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 244 RDEALHLTGTQHILNLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F    NP PW++
Sbjct: 304 MIGLNKEILCQYVEYITNIRMQAVGLGIPFNTRTNPIPWIN 344


>gi|319779630|ref|YP_004130543.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Taylorella equigenitalis MCE9]
 gi|317109654|gb|ADU92400.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Taylorella equigenitalis MCE9]
          Length = 377

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +     E + +   +   A   E A+A      G 
Sbjct: 237 RDEALHLTSTQHMLNIMSSGADDPEMAHIASELKNQCFELFKSAAEQEKAWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GLE  F +  +NP PW++
Sbjct: 297 MIGLNKEILIQYVEYITNIRMSAVGLEEAFPQSKQNPIPWIN 338


>gi|271499642|ref|YP_003332667.1| ribonucleotide reductase [Dickeya dadantii Ech586]
 gi|270343197|gb|ACZ75962.1| ribonucleotide reductase [Dickeya dadantii Ech586]
          Length = 376

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRAGQDDPEMAQIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFETRTNPIPWIN 337


>gi|282600304|ref|ZP_05973774.2| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rustigianii DSM 4541]
 gi|282565783|gb|EFB71318.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rustigianii DSM 4541]
          Length = 380

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E +++   +  +A   E  +A     +G 
Sbjct: 241 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEEQCYQLFVDAAEQEKEWAEYLFSEGS 300

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 301 MIGLNKEILCQYVEYITNIRMQAVGLKLPFEARSNPIPWIN 341


>gi|307129979|ref|YP_003881995.1| Ribonucleotide reductase of class Ia (aerobic), subunit beta
           [Dickeya dadantii 3937]
 gi|306527508|gb|ADM97438.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Dickeya dadantii 3937]
          Length = 376

 Score = 43.1 bits (100), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRAGQDDPEMAKIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFETRTNPIPWIN 337


>gi|152971181|ref|YP_001336290.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206577425|ref|YP_002237361.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella
           pneumoniae 342]
 gi|262043285|ref|ZP_06016416.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288934289|ref|YP_003438348.1| ribonucleotide reductase [Klebsiella variicola At-22]
 gi|330000612|ref|ZP_08303755.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
 gi|150956030|gb|ABR78060.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206566483|gb|ACI08259.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella
           pneumoniae 342]
 gi|259039384|gb|EEW40524.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288889018|gb|ADC57336.1| ribonucleotide reductase [Klebsiella variicola At-22]
 gi|328537954|gb|EGF64133.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
          Length = 376

 Score = 43.1 bits (100), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVLAAQQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|269102947|ref|ZP_06155644.1| ribonucleotide reductase of class Ia (aerobic) beta subunit
           [Photobacterium damselae subsp. damselae CIP 102761]
 gi|268162845|gb|EEZ41341.1| ribonucleotide reductase of class Ia (aerobic) beta subunit
           [Photobacterium damselae subsp. damselae CIP 102761]
          Length = 377

 Score = 43.1 bits (100), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    KE + +   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLLRNGHDDPEMAEIAKESEAECFDIFKRAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R + +GLE  +   T+NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNLRMNAVGLEHAYTGATQNPIPWIN 338


>gi|242238482|ref|YP_002986663.1| ribonucleotide-diphosphate reductase subunit beta [Dickeya dadantii
           Ech703]
 gi|242130539|gb|ACS84841.1| ribonucleotide reductase [Dickeya dadantii Ech703]
          Length = 376

 Score = 43.1 bits (100), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGQDDPEMAKVAEECQQQCYDLFVMAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFETRTNPIPWIN 337


>gi|327198722|emb|CCA61423.1| unnamed protein product [Diadromus pulchellus ascovirus 4a]
          Length = 395

 Score = 42.7 bits (99), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 1/80 (1%)

Query: 40  EATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSE 98
           E   + +AY      + F+ ++    +QY++FIAN+R   +  + P  + ++NP P    
Sbjct: 303 EDEFINLAYDEYADDEVFMNISKTKLKQYIRFIANKRMEAMRYDHPFPEASDNPLPEFEI 362

Query: 99  VIDLKKEKNFFETRVTEYQQ 118
           +I+     NFFE R T+Y +
Sbjct: 363 MINAPINTNFFENRSTDYAR 382


>gi|290508492|ref|ZP_06547863.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella sp.
           1_1_55]
 gi|289777886|gb|EFD85883.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella sp.
           1_1_55]
          Length = 405

 Score = 42.7 bits (99), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +   A   E  +A      G 
Sbjct: 266 RDEALHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVLAAQQEKEWADYLFRDGS 325

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 326 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 366


>gi|326536452|ref|YP_004300883.1| NrdB aerobic ribonucleoside diphosphate reductase small subunit
           [Aeromonas phage 65]
 gi|312262798|gb|ADQ53054.1| NrdB aerobic ribonucleoside diphosphate reductase small subunit
           [Aeromonas phage 65]
          Length = 376

 Score = 42.7 bits (99), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 5/102 (4%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETM-PKG 56
           RDE+LHL     +I+  Q   ++P +    K  + K+ ++  E    E  +A   M  K 
Sbjct: 237 RDENLHLKATQTIISRWQTGKDDPEMVEIAKRLEGKAVSIFEEVVAQEKEWAEYLMGDKS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE 98
             GLN      Y++++A+ R    GL   +   +NP PW+++
Sbjct: 297 LNGLNRDVLCNYIEYLADNRMRSAGLPSSYAKRKNPLPWVTK 338


>gi|238895770|ref|YP_002920506.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella
           pneumoniae NTUH-K2044]
 gi|238548088|dbj|BAH64439.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 396

 Score = 42.7 bits (99), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +   A   E  +A      G 
Sbjct: 257 RDEALHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVLAAQQEKEWADYLFRDGS 316

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 317 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 357


>gi|50120137|ref|YP_049304.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           atrosepticum SCRI1043]
 gi|49610663|emb|CAG74108.1| ribonucleoside-diphosphate reductase 1 beta chain [Pectobacterium
           atrosepticum SCRI1043]
          Length = 376

 Score = 42.7 bits (99), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQGVGLSLPFQTRTNPIPWIN 337


>gi|332974578|gb|EGK11498.1| ribonucleotide-diphosphate reductase beta subunit [Kingella kingae
           ATCC 23330]
          Length = 384

 Score = 42.7 bits (99), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 18/108 (16%)

Query: 2   RDESLHLNF----------GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 51
           RDE+LHL            G+D ++  +I        E Q +   +  +A   E  +A  
Sbjct: 244 RDEALHLTSTQHMLNLMRSGVDDLDMAEI------AAELQDECFELFKKAAEQEKEWAAY 297

Query: 52  TMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
               G  +GLN     QY+++I N R   +GL+  F + T+NP PW++
Sbjct: 298 LFKDGSMIGLNKDILCQYVEYITNHRMLAVGLQAAFPQATQNPIPWIN 345


>gi|190150315|ref|YP_001968840.1| ribonucleoside-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|303253584|ref|ZP_07339722.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307245900|ref|ZP_07527985.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307247988|ref|ZP_07530018.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307254872|ref|ZP_07536697.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307259315|ref|ZP_07541044.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|307263658|ref|ZP_07545269.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|189915446|gb|ACE61698.1| ribonucleoside-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302647504|gb|EFL77722.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306853260|gb|EFM85480.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306855503|gb|EFM87676.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306862169|gb|EFM94138.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306866682|gb|EFM98541.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306871035|gb|EFN02768.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 376

 Score = 42.7 bits (99), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE LHL    +++N I    ++P +    +E +Q++  +   A   E  +A      G 
Sbjct: 237 RDEYLHLTGTQNMLNIIASGQDDPEMAEIAEECKQEAYDLFVAAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     +Y+++I N R   +GL   F  + NP PW++
Sbjct: 297 MIGLNEDILVKYVEYITNIRMQAVGLPRPFAASSNPIPWIN 337


>gi|172058301|ref|YP_001814761.1| ribonucleotide-diphosphate reductase subunit beta [Exiguobacterium
           sibiricum 255-15]
 gi|171990822|gb|ACB61744.1| Ribonucleoside-diphosphate reductase [Exiguobacterium sibiricum
           255-15]
          Length = 347

 Score = 42.7 bits (99), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 6/122 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE  H  F   ++  +  E+P +     F +        A  LEI ++ E + +   GL
Sbjct: 217 RDELQHSYFISQLLRAVLTEHPDIDADGSFTKFVYATFERAVDLEIEWS-EYVLRDLDGL 275

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLK---KEKNFFETRVTEY 116
           +      Y++++AN+R   IGL+ L++ + E+  PW+    D      + +FFE +   Y
Sbjct: 276 DVSEMRDYVKYLANKRLRVIGLDDLYEGHDEDVMPWIRAYSDDSMNATKSDFFEQKSRSY 335

Query: 117 QQ 118
            +
Sbjct: 336 AK 337


>gi|126208467|ref|YP_001053692.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae L20]
 gi|165976419|ref|YP_001652012.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|303251074|ref|ZP_07337260.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307250239|ref|ZP_07532194.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|307252630|ref|ZP_07534523.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307261475|ref|ZP_07543145.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|126097259|gb|ABN74087.1| ribonucleoside-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|165876520|gb|ABY69568.1| ribonucleoside-diphosphate reductase, beta chain [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|302650084|gb|EFL80254.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306857725|gb|EFM89826.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306859875|gb|EFM91895.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306868827|gb|EFN00634.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 376

 Score = 42.7 bits (99), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE LHL    +++N I    ++P +    +E +Q++  +   A   E  +A      G 
Sbjct: 237 RDEYLHLTGTQNMLNIIASGQDDPEMAEIAEECKQEAYDLFVAAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     +Y+++I N R   +GL   F  + NP PW++
Sbjct: 297 MIGLNEDILVKYVEYITNIRMQAVGLPRPFAASSNPIPWIN 337


>gi|310830452|ref|YP_003965553.1| Ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           polymyxa SC2]
 gi|309249919|gb|ADO59485.1| Ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           polymyxa SC2]
          Length = 342

 Score = 42.7 bits (99), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 1/100 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ H  F  ++  Q+ I+ P L T++ +      + EA   E  +A E +  G  G++
Sbjct: 214 RDENQHCYFFAELYKQLLIDFPQLNTEQNKTFVYNFMDEAVRHETEWA-EYVLDGIEGID 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101
                 Y++ IAN R   +GL   ++   N  PW+    D
Sbjct: 273 LDEFRGYIRHIANNRLRLMGLPAAYEGVSNTMPWIRPFSD 312


>gi|253687496|ref|YP_003016686.1| ribonucleotide reductase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251754074|gb|ACT12150.1| ribonucleotide reductase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 376

 Score = 42.7 bits (99), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFQTRTNPIPWIN 337


>gi|114563305|ref|YP_750818.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           frigidimarina NCIMB 400]
 gi|114334598|gb|ABI71980.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella frigidimarina NCIMB 400]
          Length = 376

 Score = 42.7 bits (99), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 5/100 (5%)

Query: 2   RDESLHLNFG--IDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    I  + Q   ++P +     E +Q++  +  +A   E  +A      G 
Sbjct: 237 RDEALHLNSTQHILALMQGGKDDPEMGEIAAECKQEAYDLFVKAAEQEKEWAKYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
            +GLN     QY++FI N+R   + L   +    NP PWM
Sbjct: 297 MIGLNEQILCQYVEFITNQRMKSVHLPQPYDEQSNPLPWM 336


>gi|294788520|ref|ZP_06753762.1| ribonucleoside-diphosphate reductase, beta subunit [Simonsiella
           muelleri ATCC 29453]
 gi|294483397|gb|EFG31082.1| ribonucleoside-diphosphate reductase, beta subunit [Simonsiella
           muelleri ATCC 29453]
          Length = 384

 Score = 42.7 bits (99), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E   +   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTSTQHMLNLMRNGTDDPEMAEIAAELHDECVALFKKAAAQEKEWAAYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F K  +NP PW++
Sbjct: 304 MIGLNKDILGQYVEYITNLRMSAVGLPQAFPKALQNPIPWIN 345


>gi|227114436|ref|ZP_03828092.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 376

 Score = 42.7 bits (99), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFQTRTNPIPWIN 337


>gi|227328222|ref|ZP_03832246.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 376

 Score = 42.4 bits (98), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFQTRTNPIPWIN 337


>gi|317492553|ref|ZP_07950980.1| ribonucleotide reductase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919303|gb|EFV40635.1| ribonucleotide reductase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 376

 Score = 42.4 bits (98), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E +Q+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLMRSGQDDPEMAEVAVECEQQCYDLFVLAAEQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLKLPFQTRSNPIPWIN 337


>gi|127512873|ref|YP_001094070.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           loihica PV-4]
 gi|126638168|gb|ABO23811.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella loihica PV-4]
          Length = 376

 Score = 42.4 bits (98), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 5/100 (5%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    ++   Q   ++P +    KE +Q +  +  +A   E  +A      G 
Sbjct: 237 RDEALHLNSTQHILKLMQGGKDDPEMAEIAKECEQTAIDIFVKAAEQEKEWAKYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
            +GLN     QY+++I N R   + L   +    NP PWM
Sbjct: 297 MIGLNEQILCQYVEYITNERMKSVNLVSPYADQSNPLPWM 336


>gi|261822457|ref|YP_003260563.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           wasabiae WPP163]
 gi|261606470|gb|ACX88956.1| ribonucleotide reductase [Pectobacterium wasabiae WPP163]
          Length = 376

 Score = 42.4 bits (98), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFQTRTNPIPWIN 337


>gi|183599610|ref|ZP_02961103.1| hypothetical protein PROSTU_03095 [Providencia stuartii ATCC 25827]
 gi|188021860|gb|EDU59900.1| hypothetical protein PROSTU_03095 [Providencia stuartii ATCC 25827]
          Length = 378

 Score = 42.4 bits (98), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E + +   +  +A   E  +A     +G 
Sbjct: 239 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEDECYKLFVDAAEQEKEWAEYLFSEGS 298

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 299 MIGLNKDILCQYVEYITNIRMQAVGLKLPFEARSNPIPWIN 339


>gi|328722535|ref|XP_001944897.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Acyrthosiphon pisum]
          Length = 345

 Score = 42.4 bits (98), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 56/112 (50%), Gaps = 9/112 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K        ++ +A  +E  +    +    VG++
Sbjct: 232 RDEGLHTDFACLLFK-------HLDQKPPLTVITHIICKAVTIEQYFLTNALLVKMVGMS 284

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 113
                +Y++F+A+R  +++G   +++ + NPFP+M +++  + + N FE RV
Sbjct: 285 CEKMAEYIEFVADRLLNELGCPAVYR-SSNPFPFM-DLLSQQGKTNGFEKRV 334


>gi|193062401|ref|ZP_03043496.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E22]
 gi|192932067|gb|EDV84666.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E22]
          Length = 393

 Score = 42.4 bits (98), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E + +   +  +A   E  +A      G 
Sbjct: 254 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKLECYDLFVQAAQQEKDWADYLFRDGS 313

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 314 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 354


>gi|229542075|ref|ZP_04431135.1| Ribonucleoside-diphosphate reductase [Bacillus coagulans 36D1]
 gi|229326495|gb|EEN92170.1| Ribonucleoside-diphosphate reductase [Bacillus coagulans 36D1]
          Length = 347

 Score = 42.4 bits (98), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 4/124 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  +  E+P L T  F         E+  LE  ++ E + +   G++
Sbjct: 219 RDELEHGRFISELIRAVLSEHPELNTPAFSDWVYARFRESVDLETEWS-EYVLQDVEGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                 ++++ AN+    IGL  L+ ++ ENP  W+    D     + +FFE +   Y +
Sbjct: 278 LEEMAGFIKYRANKMLRMIGLSELYPEHVENPMKWIRAYADNFDATKTDFFEQKSRSYTK 337

Query: 119 GAEL 122
            ++L
Sbjct: 338 VSDL 341


>gi|225023977|ref|ZP_03713169.1| hypothetical protein EIKCOROL_00844 [Eikenella corrodens ATCC
           23834]
 gi|224943002|gb|EEG24211.1| hypothetical protein EIKCOROL_00844 [Eikenella corrodens ATCC
           23834]
          Length = 384

 Score = 42.4 bits (98), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E +     +  +A   E  +A      G 
Sbjct: 244 RDEALHLTSTQHMLNLMRSGTDDPEMAEIAAELENDCFELFKKAAEQEKEWAEYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F   T+NP PW++
Sbjct: 304 MIGLNKDILCQYVEYITNHRMMAVGLNAAFPAATQNPIPWIN 345


>gi|209695249|ref|YP_002263178.1| ribonucleotide-diphosphate reductase subunit beta [Aliivibrio
           salmonicida LFI1238]
 gi|208009201|emb|CAQ79455.1| ribonucleoside-diphosphate reductase 1 beta chain [Aliivibrio
           salmonicida LFI1238]
          Length = 377

 Score = 42.4 bits (98), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P       E +Q    +   A   E  +A+     G 
Sbjct: 237 RDEALHLTSTQHMVNLLRTGQDDPEFVEIAAECEQDCFDLFKAAAEQEKEWANYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL   +   T+NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNLRMKAVGLSGAYDGATQNPIPWIN 338


>gi|307257037|ref|ZP_07538813.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306864521|gb|EFM96428.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 376

 Score = 42.4 bits (98), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE LHL    +++N I    ++P +    +E +Q++  +   A   E  +A      G 
Sbjct: 237 RDEYLHLTGTQNMLNIIASGQDDPEMAEIAEECKQEAYDLFVAAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     +Y+++I N R   +GL   F    NP PW++
Sbjct: 297 MIGLNEDILVKYVEYITNIRMQAVGLPRPFATASNPIPWIN 337


>gi|238794995|ref|ZP_04638591.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           intermedia ATCC 29909]
 gi|238725698|gb|EEQ17256.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           intermedia ATCC 29909]
          Length = 376

 Score = 42.4 bits (98), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLMRSGEDDPEMAEIAIECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F    NP PW++
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGVPFATRTNPIPWIN 337


>gi|315930891|gb|EFV09876.1| ribonucleotide reductase, small chain family protein [Campylobacter
           jejuni subsp. jejuni 305]
          Length = 305

 Score = 42.0 bits (97), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 40/85 (47%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+  E   K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF 86
               E+Y+ ++ ++R   I L+ L+
Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLY 300


>gi|237747538|ref|ZP_04578018.1| ribonucleotide-diphosphate reductase subunit beta [Oxalobacter
           formigenes OXCC13]
 gi|229378900|gb|EEO28991.1| ribonucleotide-diphosphate reductase subunit beta [Oxalobacter
           formigenes OXCC13]
          Length = 376

 Score = 42.0 bits (97), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    KE +++S  +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMGSGEDDPDMAEIAKECREQSIDLFVRAAEQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +G+   F+   NP PW++
Sbjct: 297 MIGLNRDILCQYVEYITNTRMQAVGMPLPFEIRSNPIPWIN 337


>gi|238760194|ref|ZP_04621340.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           aldovae ATCC 35236]
 gi|238701573|gb|EEP94144.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           aldovae ATCC 35236]
          Length = 376

 Score = 42.0 bits (97), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLMRAGEDDPEMAEIAIECQQQCYDLFVLAAEQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F    NP PW++
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGIPFATRTNPIPWIN 337


>gi|325268103|ref|ZP_08134749.1| ribonucleotide-diphosphate reductase beta subunit [Kingella
           denitrificans ATCC 33394]
 gi|324980488|gb|EGC16154.1| ribonucleotide-diphosphate reductase beta subunit [Kingella
           denitrificans ATCC 33394]
          Length = 384

 Score = 42.0 bits (97), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL-WTK---EFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +    W +   + QQ+   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTSTQHMLNLMRGGSEGTEWAQIAQDLQQECFDLFVKAAEQEKEWASYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F K T+NP PW++
Sbjct: 304 MIGLNKDILCQYVEYITNHRMLAVGLPVAFPKSTQNPIPWIN 345


>gi|294637129|ref|ZP_06715438.1| ribonucleoside-diphosphate reductase, beta subunit [Edwardsiella
           tarda ATCC 23685]
 gi|291089663|gb|EFE22224.1| ribonucleoside-diphosphate reductase, beta subunit [Edwardsiella
           tarda ATCC 23685]
          Length = 376

 Score = 42.0 bits (97), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E + +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLMRSGQDDPEMAEIAAECETQCYDLFVQAAQQEKDWASYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 297 MIGLNRDILCQYVEYITNIRMQAVGLSLPFETRSNPIPWIN 337


>gi|167623961|ref|YP_001674255.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           halifaxensis HAW-EB4]
 gi|167353983|gb|ABZ76596.1| Ribonucleoside-diphosphate reductase [Shewanella halifaxensis
           HAW-EB4]
          Length = 376

 Score = 42.0 bits (97), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 5/100 (5%)

Query: 2   RDESLHLNFG--IDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    I  I Q   ++P +    KE +Q +  +  +A   E  +A      G 
Sbjct: 237 RDEALHLNSTQHILKIMQGGKDDPEMAEIAKECEQTAIDIFVKAAEQEKEWAKYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
            +GLN     QY+++I N R   +     +    NP PWM
Sbjct: 297 MIGLNETILCQYVEYITNERMKSVNFASPYAEQTNPLPWM 336


>gi|215275540|sp|P0C8I2|RIR2_ASFWA RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 327

 Score = 42.0 bits (97), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE---IAYAHETMPKGFV 58
           RDE +H +F   +I+      P       ++    +L EA  L    I+YA +       
Sbjct: 196 RDEGVHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFISYAFDKARGRVP 249

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117
           G +     QY+++  +  C  +  + ++K   NPFP M++    + EK NFFE R T+YQ
Sbjct: 250 GFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEKTNFFELRPTQYQ 308


>gi|323494790|ref|ZP_08099889.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           brasiliensis LMG 20546]
 gi|323310983|gb|EGA64148.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           brasiliensis LMG 20546]
          Length = 377

 Score = 42.0 bits (97), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++            +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKDAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  + + T NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDAAYPEATSNPIPWIN 338


>gi|157371509|ref|YP_001479498.1| ribonucleotide-diphosphate reductase subunit beta [Serratia
           proteamaculans 568]
 gi|157323273|gb|ABV42370.1| Ribonucleoside-diphosphate reductase [Serratia proteamaculans 568]
          Length = 376

 Score = 42.0 bits (97), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGADDPEMAEIAVECQQQCYDLFVLAAEQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F    NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGLPFATRSNPIPWIN 337


>gi|269139684|ref|YP_003296385.1| ribonucleotide reductase, beta subunit [Edwardsiella tarda EIB202]
 gi|267985345|gb|ACY85174.1| ribonucleotide reductase, beta subunit [Edwardsiella tarda EIB202]
 gi|304559553|gb|ADM42217.1| Ribonucleotide reductase of class Ia, beta subunit [Edwardsiella
           tarda FL6-60]
          Length = 376

 Score = 42.0 bits (97), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E + +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLMRSGQDDPEMAEIAAECEDQCYDLFVQAAQQEKEWAGYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 297 MIGLNRDILCQYVEYITNIRMQAVGLSLPFETRSNPIPWIN 337


>gi|260778827|ref|ZP_05887719.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260604991|gb|EEX31286.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 377

 Score = 42.0 bits (97), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++            +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKDAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  + + T NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDAAYPEATSNPIPWIN 338


>gi|326783875|ref|YP_004324269.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM7]
 gi|310003887|gb|ADO98282.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM7]
          Length = 388

 Score = 42.0 bits (97), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 10/110 (9%)

Query: 2   RDESLHLNFGIDVI-NQIKIENPHLWTKEFQQKSRT----MLHEATLLEIAYAHETMPKG 56
           RDE+ HL    +++ N +  ++P +  K+   + R     M   A   E  +A      G
Sbjct: 248 RDENQHLVLTQNILKNWMNGDDPEM--KQIADEERNNVIGMFRNAVEEEKEWAEYLFSGG 305

Query: 57  -FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK--YTENPFPWMSEVIDLK 103
             +GLN     QY+++IAN+R   +G +P++      NP PW    I  K
Sbjct: 306 SMIGLNDKLLNQYVEWIANKRMKALGFDPIYDQPLRNNPLPWTQHWISSK 355


>gi|119774862|ref|YP_927602.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           amazonensis SB2B]
 gi|119767362|gb|ABL99932.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella amazonensis SB2B]
          Length = 391

 Score = 42.0 bits (97), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 5/100 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEF----QQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    ++N ++         E     QQ++  +   A   E  +A      G 
Sbjct: 252 RDEALHLNSTQHILNIMQGGKDDAEMAEIAIECQQEAYDLFLRAAEQEKEWAKYLFKDGS 311

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
            +GLN     QY+++I N+R   + L   +  + NP PWM
Sbjct: 312 MIGLNEQILCQYVEYITNQRMKSVNLPLPYPESTNPLPWM 351


>gi|323145837|gb|ADX32078.1| hypothetical protein [Pseudomonas phage P3_CHA]
 gi|323146023|gb|ADX32263.1| hypothetical protein [Pseudomonas phage PAK_P3]
          Length = 344

 Score = 42.0 bits (97), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 1/120 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           + DE+ H+   I V+  ++ +          Q+ R ++ +    E+ Y      KG    
Sbjct: 205 LADETDHVEKNIRVLKAMRKDLTPEENSILDQEIRYLIEDYREAEVKYLVLAFEKGPQHD 264

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L      +Y+ ++   R  +  L    +  ENP PWM  +I+  +  NFFE +VT+Y   
Sbjct: 265 LTFEQTVEYIDYLCRLRLFECELLKEHQVGENPLPWMEWMINAARHDNFFEKKVTDYSHS 324


>gi|322514736|ref|ZP_08067762.1| ribonucleotide-diphosphate reductase beta subunit [Actinobacillus
           ureae ATCC 25976]
 gi|322119331|gb|EFX91447.1| ribonucleotide-diphosphate reductase beta subunit [Actinobacillus
           ureae ATCC 25976]
          Length = 376

 Score = 42.0 bits (97), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE LHL    +++N +    ++P +    +E +Q++  +   A   E  +A      G 
Sbjct: 237 RDEYLHLTGTQNMLNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     +Y+++I N R   +GL   F  + NP PW++
Sbjct: 297 MIGLNEDILVKYVEYITNIRMQAVGLPRPFATSSNPIPWIN 337


>gi|330971158|gb|EGH71224.1| hypothetical protein PSYAR_11719 [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 25

 Score = 42.0 bits (97), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 17/20 (85%), Positives = 19/20 (95%)

Query: 91  NPFPWMSEVIDLKKEKNFFE 110
           NPFPWMSE+I LKKE+NFFE
Sbjct: 2   NPFPWMSEIIALKKERNFFE 21


>gi|238785708|ref|ZP_04629683.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           bercovieri ATCC 43970]
 gi|238713393|gb|EEQ05430.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           bercovieri ATCC 43970]
          Length = 376

 Score = 41.6 bits (96), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E Q +   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLMRSGEDDPEMAEIAEECQSQCYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F    NP PW++
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGVPFNTRSNPIPWIN 337


>gi|327198239|ref|YP_004306815.1| putative ribonucleotide reductase B subunit [Pseudomonas phage
           KPP10]
 gi|297591765|dbj|BAJ09185.1| putative ribonucleotide reductase B subunit [Pseudomonas phage
           KPP10]
          Length = 339

 Score = 41.6 bits (96), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 1/120 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           + DE+ H+   I V+  ++ +          Q+ R ++ +    E+ Y      KG    
Sbjct: 200 LADETDHVEKNIRVLKAMRKDLTPEENAILDQEIRYLIEDYREAEVKYLVLAFEKGPQHD 259

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L      +Y+ ++   R  +  L    +  ENP PWM  +I+  +  NFFE +VT+Y   
Sbjct: 260 LTFEQTVEYIDYLCRLRLFECELLKEHQVGENPLPWMEWMINAARHDNFFEKKVTDYSHS 319


>gi|261253084|ref|ZP_05945657.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           orientalis CIP 102891]
 gi|260936475|gb|EEX92464.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           orientalis CIP 102891]
          Length = 377

 Score = 41.6 bits (96), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++            +E +Q+   +  EA   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   + + T NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGAAYPEATSNPIPWIN 338


>gi|84386981|ref|ZP_00990005.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           splendidus 12B01]
 gi|86148466|ref|ZP_01066756.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp.
           MED222]
 gi|218709927|ref|YP_002417548.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           splendidus LGP32]
 gi|84378271|gb|EAP95130.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           splendidus 12B01]
 gi|85833763|gb|EAQ51931.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp.
           MED222]
 gi|218322946|emb|CAV19123.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           splendidus LGP32]
          Length = 377

 Score = 41.6 bits (96), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++            +E +Q+   +  EA   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFEFMQIAEECKQECFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   + + T NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGTAYPEATSNPIPWIN 338


>gi|323497713|ref|ZP_08102728.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           sinaloensis DSM 21326]
 gi|323317189|gb|EGA70185.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           sinaloensis DSM 21326]
          Length = 377

 Score = 41.6 bits (96), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++            +E +Q+   +  EA   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   + + T NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGAAYPEATSNPIPWIN 338


>gi|27904669|ref|NP_777795.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. Bp (Baizongia pistaciae)]
 gi|38605263|sp|Q89AS5|RIR2_BUCBP RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|27904066|gb|AAO26900.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera
           aphidicola str. Bp (Baizongia pistaciae)]
          Length = 376

 Score = 41.6 bits (96), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQI----KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +      E     +KE  ++   +    +  E  +A      G 
Sbjct: 237 RDEALHLTSTQHILNILHNDKNNEGMSDISKECYEECYHLFIRVSDQEKIWAKYLFQNGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   IGL   FK   NP PW++
Sbjct: 297 MLGLNQEILSQYIEYITNIRMKAIGLPSPFKILSNPIPWIN 337


>gi|21672460|ref|NP_660527.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. Sg (Schizaphis graminum)]
 gi|25091143|sp|Q8K9W4|RIR2_BUCAP RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|21623075|gb|AAM67738.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera
           aphidicola str. Sg (Schizaphis graminum)]
          Length = 376

 Score = 41.6 bits (96), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 25/42 (59%)

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
             +GLN     QY+++I N R H IG +  F+ T NP PW++
Sbjct: 296 SMLGLNKDILCQYIEYITNIRMHAIGFKMPFEKTSNPIPWIN 337


>gi|148978906|ref|ZP_01815226.1| ribonucleotide-diphosphate reductase beta subunit [Vibrionales
           bacterium SWAT-3]
 gi|145962104|gb|EDK27390.1| ribonucleotide-diphosphate reductase beta subunit [Vibrionales
           bacterium SWAT-3]
          Length = 377

 Score = 41.6 bits (96), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++            +E +Q+   +  EA   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFAFMQIAEECKQECFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   + + T NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGTAYPEATSNPIPWIN 338


>gi|294505968|ref|YP_003570026.1| Ribonucleoside-diphosphate reductase beta subunit [Salinibacter
           ruber M8]
 gi|294342296|emb|CBH23074.1| Ribonucleoside-diphosphate reductase beta subunit [Salinibacter
           ruber M8]
          Length = 324

 Score = 41.2 bits (95), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 4/121 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60
           ++E +H  FG++++N I+ E+P  +   F+Q+ R    EA   E          G +  L
Sbjct: 193 KEEQIHGLFGVELMNIIREEHPEWFGPAFEQEVRAACEEAYDAEQKVLDWIFADGELDFL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
             P  + +++   N     + ++P+F+          W  E I L K  +FF  R T Y 
Sbjct: 253 PRPVVDAFLRDKFNESLKNVDVDPIFEVDPEHLGETRWFYEEILLTKGNDFFSKRSTSYS 312

Query: 118 Q 118
           +
Sbjct: 313 K 313


>gi|91775577|ref|YP_545333.1| ribonucleotide-diphosphate reductase subunit beta [Methylobacillus
           flagellatus KT]
 gi|91709564|gb|ABE49492.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Methylobacillus flagellatus KT]
          Length = 377

 Score = 41.2 bits (95), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P       E Q +   M   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNIMRSGQDDPEFAGIASELQDECFEMFKRAAEQEKKWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS 97
            +GLN     QY+++I N R   +GL   F   + NP PW++
Sbjct: 297 MIGLNRDILCQYVEYITNNRMASVGLSAAFPNAKNNPIPWIN 338


>gi|163786628|ref|ZP_02181076.1| ribonucleoside-diphosphate reductase , beta subunit 1
           [Flavobacteriales bacterium ALC-1]
 gi|159878488|gb|EDP72544.1| ribonucleoside-diphosphate reductase , beta subunit 1
           [Flavobacteriales bacterium ALC-1]
          Length = 429

 Score = 41.2 bits (95), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 18/128 (14%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEI--------AYAHETM 53
           ++E++H +FGID+I  IK ENP  +  E  +  R +  EA   E         A   E +
Sbjct: 298 KEENIHGDFGIDIIKIIKAENPTWFDAEHNEIVRELCREAFASESELVDWIFEAGELEFL 357

Query: 54  PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFE 110
           PK  +        ++++   N     IG+E +F   E       W  + I   K  +FF 
Sbjct: 358 PKDVIN-------EFLKNRFNNSLESIGIEKVFDVDETLLTQTEWFDDEIIGTKHGDFFV 410

Query: 111 TRVTEYQQ 118
            R   Y +
Sbjct: 411 KRSINYSK 418


>gi|162849427|emb|CAN10392.1| Ribonucleotide reductase small subunit [African swine fever virus
           OURT 88/3]
 gi|291289488|emb|CBH29145.1| BA71V-F334L [African swine fever virus E75]
 gi|303398729|emb|CBW46710.1| F334L [African swine fever virus Georgia 2007/1]
          Length = 334

 Score = 41.2 bits (95), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE---IAYAHETMPKGFV 58
           RDE +H +F   +I+      P       ++    +L EA  L    I YA +       
Sbjct: 203 RDEGMHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFINYAFDKARGRVP 256

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117
           G +     QY+++  +  C  +  + ++K   NPFP M++    + EK NFFE R T+YQ
Sbjct: 257 GFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEKTNFFELRPTQYQ 315


>gi|86140897|ref|ZP_01059456.1| ribonucleoside-diphosphate reductase, beta subunit 1
           [Leeuwenhoekiella blandensis MED217]
 gi|85832839|gb|EAQ51288.1| ribonucleoside-diphosphate reductase, beta subunit 1
           [Leeuwenhoekiella blandensis MED217]
          Length = 427

 Score = 41.2 bits (95), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 4/121 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60
           ++E +H +FG+D+IN IK ENP  + +E     + M   +   E         KG +  L
Sbjct: 296 KEEQIHGDFGVDIINIIKKENPEWFDEEHNNLIKEMCLNSFEAESKVVDWIFEKGELDFL 355

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQ 117
                 ++++   N+    IGLE LF   E       W  + I   K  +FF  R   Y 
Sbjct: 356 PKAVINEFLKNRFNKSLEAIGLEKLFDIDEALLQETEWFDDEIIGTKHGDFFVKRSINYS 415

Query: 118 Q 118
           +
Sbjct: 416 K 416


>gi|238920521|ref|YP_002934036.1| ribonucleotide-diphosphate reductase subunit beta [Edwardsiella
           ictaluri 93-146]
 gi|238870090|gb|ACR69801.1| ribonucleoside-diphosphate reductase, beta subunit, putative
           [Edwardsiella ictaluri 93-146]
          Length = 376

 Score = 41.2 bits (95), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E   +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLMRAGQDDPEMAEIATECASQCYDLFVQAAQQEKEWAGYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 297 MIGLNRDILCQYVEYITNIRMQAVGLPLPFETRSNPIPWIN 337


>gi|116326775|ref|YP_803312.1| hypothetical protein TNAV2c_gp089 [Trichoplusia ni ascovirus 2c]
 gi|102231783|gb|ABF70606.1| hypothetical protein [Trichoplusia ni ascovirus 2c]
          Length = 269

 Score = 41.2 bits (95), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 8/91 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N +  + P+        +   +L EA ++E  +  + +P   +G+N
Sbjct: 172 RDEGLHTDFACLMYNYVVQKPPN-------SRVIEILKEAVVIEKDFLTDALPVRLLGMN 224

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENP 92
                QY++F+A+R  +++  E  +   +NP
Sbjct: 225 CDLMSQYIEFVADRLLYELIGEKYYN-AKNP 254


>gi|33152746|ref|NP_874099.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           ducreyi 35000HP]
 gi|33148970|gb|AAP96488.1| ribonucleoside-diphosphate reductase, beta chain [Haemophilus
           ducreyi 35000HP]
          Length = 376

 Score = 40.8 bits (94), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE LHL     ++N I    ++P +     E QQ++  +   A   E  +A      G 
Sbjct: 237 RDEYLHLAGTQQMLNIIASGQDDPEMAEIAIECQQEAYDLFVAAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     +Y+++I N R   +GL   F    NP PW++
Sbjct: 297 MIGLNKEILVKYVEYITNIRMQSVGLPLPFATQSNPIPWIN 337


>gi|162849254|emb|CAN10143.1| Ribonucleotide reductase small subunit [African swine fever virus
           Benin 97/1]
          Length = 327

 Score = 40.8 bits (94), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE---IAYAHETMPKGFV 58
           RDE +H +F   +I+      P       ++    +L EA  L    I YA +       
Sbjct: 196 RDEGMHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFINYAFDKARGRVP 249

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117
           G +     QY+++  +  C  +  + ++K   NPFP M++    + EK NFFE R T+YQ
Sbjct: 250 GFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEKTNFFELRPTQYQ 308


>gi|9628152|ref|NP_042738.1| ribonucleotide reductase small subunit [African swine fever virus]
 gi|1172939|sp|P42492|RIR2_ASFB7 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|780414|gb|AAA65274.1| ribonucleotide reductase small subunit [African swine fever virus]
 gi|1097433|prf||2113434AT ribonucleotide reductase:SUBUNIT=small
          Length = 334

 Score = 40.8 bits (94), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE---IAYAHETMPKGFV 58
           RDE +H +F   +I+      P       ++    +L EA  L    I YA +       
Sbjct: 203 RDEGVHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFINYAFDKARGRVP 256

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117
           G +     QY+++  +  C  +  + ++K   NPFP M++    + EK NFFE R T+YQ
Sbjct: 257 GFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEKTNFFELRPTQYQ 315


>gi|148688624|gb|EDL20571.1| mCG140327 [Mus musculus]
          Length = 65

 Score = 40.8 bits (94), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 2/49 (4%)

Query: 70  QFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           +F+A+    ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 1   EFVADMLMLELGFNKIFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 47


>gi|215275539|sp|P0C8I1|RIR2_ASFP4 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 327

 Score = 40.8 bits (94), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE---IAYAHETMPKGFV 58
           RDE +H +F   +I+      P       ++    +L EA  L    I YA +       
Sbjct: 196 RDEGVHCSFACFLISNYVYNIPE------ERIIHKILKEAVELVDEFINYAFDKARGRVP 249

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117
           G +     QY+++  +  C  +  + ++K   NPFP M++    + EK NFFE R T+YQ
Sbjct: 250 GFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEKTNFFELRPTQYQ 308


>gi|83814991|ref|YP_444284.1| ribonucleoside-diphosphate reductase, beta subunit [Salinibacter
           ruber DSM 13855]
 gi|83756385|gb|ABC44498.1| ribonucleoside-diphosphate reductase, beta subunit [Salinibacter
           ruber DSM 13855]
          Length = 324

 Score = 40.8 bits (94), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 4/121 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60
           ++E +H  FG++++N I+ E+P  +   F+Q+ R    EA   E          G +  L
Sbjct: 193 KEEQIHGLFGVELMNIIREEHPEWFGPAFEQEVRAACEEAYDAEQKVLDWIFADGELDFL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
             P  + +++   N     + ++P+F+          W  E + L K  +FF  R T Y 
Sbjct: 253 PRPVVDAFLRDKFNESLKNVDVDPIFEVDPEHLGETRWFYEEVLLTKGNDFFSKRSTSYS 312

Query: 118 Q 118
           +
Sbjct: 313 K 313


>gi|48696741|ref|YP_024565.1| ORF20 [Ostreid herpesvirus 1]
 gi|81986458|sp|Q6R7K3|RIR2_OSHVF RecName: Full=Ribonucleoside-diphosphate reductase small chain
 gi|41352405|gb|AAS00912.1| ORF20 [Ostreid herpesvirus 1]
          Length = 579

 Score = 40.4 bits (93), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 28/120 (23%), Positives = 61/120 (50%), Gaps = 13/120 (10%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+LH  F  +++ ++  + P        ++   +L EAT +E+ +A   +P+G   + 
Sbjct: 256 RDETLHFRFYAELL-RLMPDRPS------DERIAELLTEATEIELEFAEYVVPEGVKYIT 308

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-----KYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                Q+++   N+ C  + + P++         +P  +M+  ++ +++ NFFE + TEY
Sbjct: 309 KDRLIQHVKANTNQVCEMLDINPIYFDQKGNVLLSPLLYMN-TLESEQKINFFEGKATEY 367


>gi|149197800|ref|ZP_01874849.1| ribonucleotide-diphosphate reductase beta subunit [Lentisphaera
           araneosa HTCC2155]
 gi|149139021|gb|EDM27425.1| ribonucleotide-diphosphate reductase beta subunit [Lentisphaera
           araneosa HTCC2155]
          Length = 376

 Score = 40.4 bits (93), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 7/102 (6%)

Query: 2   RDESLHLNFGIDVINQIKIE---NPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
           RDE+LHL  G   + QI  E   +P +     E + +   +   A   E  +A      G
Sbjct: 237 RDEALHLT-GTQQMIQIFREGKDDPEMAEIAAECEGQVYQIFSSAAEQEKEWAKFLFRDG 295

Query: 57  -FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
             +GLNA     Y+++I N R    G + +F  T+NP PWM+
Sbjct: 296 SMIGLNADILGDYVEYITNVRLKASGYKNVFPTTQNPLPWMN 337


>gi|157961884|ref|YP_001501918.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           pealeana ATCC 700345]
 gi|157846884|gb|ABV87383.1| Ribonucleoside-diphosphate reductase [Shewanella pealeana ATCC
           700345]
          Length = 376

 Score = 40.4 bits (93), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 5/100 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    ++  +    ++P +    KE +Q +  +  +A   E  +A      G 
Sbjct: 237 RDEALHLNSTQHILKIMHAGKDDPEMAEIAKECEQTAIDIFIKAAEQEKEWAKYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
            +GLN     QY+++I N R   +     +    NP PWM
Sbjct: 297 MIGLNETILCQYVEYITNERMKAVNFASPYAEQTNPLPWM 336


>gi|218768312|ref|YP_002342824.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           meningitidis Z2491]
 gi|121052320|emb|CAM08650.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           meningitidis Z2491]
 gi|261392428|emb|CAX49973.1| ribonucleoside-diphosphate reductase beta subunit (ribonucleotide
           reductase) [Neisseria meningitidis 8013]
          Length = 377

 Score = 40.4 bits (93), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 338


>gi|297250515|ref|ZP_06864465.2| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           polysaccharea ATCC 43768]
 gi|296838835|gb|EFH22773.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           polysaccharea ATCC 43768]
          Length = 377

 Score = 40.4 bits (93), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 338


>gi|161353784|ref|NP_274308.2| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           meningitidis MC58]
 gi|304387414|ref|ZP_07369605.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           meningitidis ATCC 13091]
 gi|304338507|gb|EFM04626.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           meningitidis ATCC 13091]
 gi|316984078|gb|EFV63056.1| ribonucleoside-diphosphate reductase 1 subunit beta [Neisseria
           meningitidis H44/76]
 gi|325134468|gb|EGC57113.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M13399]
 gi|325140485|gb|EGC63006.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis CU385]
 gi|325144569|gb|EGC66868.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M01-240013]
 gi|325200084|gb|ADY95539.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis H44/76]
 gi|325204292|gb|ADY99745.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M01-240355]
 gi|325205936|gb|ADZ01389.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M04-240196]
          Length = 377

 Score = 40.4 bits (93), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 338


>gi|82492124|gb|ABB77921.1| ribonucleotide reductase beta chain [Environmental halophage 1
           AAJ-2005]
          Length = 358

 Score = 40.4 bits (93), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 4/121 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60
           ++E +H  FG +++  I+ ENP L+  +F  + +    +A   E       +  G +  L
Sbjct: 227 KEEQIHGLFGQELVETIREENPDLFDDDFTDEIQDACQQAYEAESEILDWILEDGELDFL 286

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
                + +++   N+     G++P+F   E+      W  E I + KE +FF  R T Y 
Sbjct: 287 PREHIDAFLKDRFNQSLDNAGVDPVFDPDEDVVDETRWFDEDIMMTKENDFFSKRSTTYN 346

Query: 118 Q 118
           +
Sbjct: 347 K 347


>gi|121635003|ref|YP_975248.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           meningitidis FAM18]
 gi|120866709|emb|CAM10461.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           meningitidis FAM18]
 gi|325128288|gb|EGC51172.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis N1568]
 gi|325130346|gb|EGC53112.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis OX99.30304]
 gi|325132508|gb|EGC55201.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M6190]
 gi|325136206|gb|EGC58814.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M0579]
 gi|325138282|gb|EGC60851.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis ES14902]
 gi|325142424|gb|EGC64828.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis 961-5945]
 gi|325198443|gb|ADY93899.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis G2136]
 gi|325201998|gb|ADY97452.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M01-240149]
          Length = 377

 Score = 40.4 bits (93), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 338


>gi|319410557|emb|CBY90925.1| ribonucleoside-diphosphate reductase beta subunit (ribonucleotide
           reductase) [Neisseria meningitidis WUE 2594]
 gi|325208250|gb|ADZ03702.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis NZ-05/33]
          Length = 384

 Score = 40.4 bits (93), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 345


>gi|161870162|ref|YP_001599332.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           meningitidis 053442]
 gi|161595715|gb|ABX73375.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           meningitidis 053442]
          Length = 384

 Score = 40.4 bits (93), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 345


>gi|260768282|ref|ZP_05877216.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           furnissii CIP 102972]
 gi|260616312|gb|EEX41497.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           furnissii CIP 102972]
 gi|315179989|gb|ADT86903.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio furnissii
           NCTC 11218]
          Length = 377

 Score = 40.4 bits (93), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++            +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMINLLRNGMDDFEFLQIAEECKQECFDLFKQAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  +   T NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDAAYPSATTNPIPWIN 338


>gi|308389409|gb|ADO31729.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           meningitidis alpha710]
          Length = 384

 Score = 40.4 bits (93), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 345


>gi|254805092|ref|YP_003083313.1| ribonucleoside-diphosphate reductase beta chain [Neisseria
           meningitidis alpha14]
 gi|254668634|emb|CBA06257.1| ribonucleoside-diphosphate reductase beta chain [Neisseria
           meningitidis alpha14]
          Length = 384

 Score = 40.4 bits (93), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 345


>gi|7226528|gb|AAF41664.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis MC58]
 gi|254670476|emb|CBA06168.1| ribonucleoside-diphosphate reductase beta chain [Neisseria
           meningitidis alpha153]
          Length = 384

 Score = 40.4 bits (93), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 345


>gi|295134784|ref|YP_003585460.1| ribonucleotide reductase [Zunongwangia profunda SM-A87]
 gi|294982799|gb|ADF53264.1| ribonucleotide reductase [Zunongwangia profunda SM-A87]
          Length = 324

 Score = 40.4 bits (93), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 12/124 (9%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQK-----SRTMLHEATLLEIAYAHETMPKGF 57
           DE +H N GI +INQI+ E P  + +E  +K     +R++  E  +L+  + +  +    
Sbjct: 194 DEQIHANAGIYIINQIREEYPDYFNEEMTRKLTDVVTRSIEVEEEILDWIFENGQLE--- 250

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVT 114
             +N  +   +M+F  +     IGL   +  T     P  W  E +      +FF  R  
Sbjct: 251 -NINKKNLMDFMKFRLDDSLKSIGLPKQYNITAAEYQPMLWFEEEVFANSLDDFFARRPV 309

Query: 115 EYQQ 118
           +Y +
Sbjct: 310 DYTK 313


>gi|322515075|ref|ZP_08068083.1| ribonucleoside-diphosphate reductase beta subunit [Actinobacillus
           ureae ATCC 25976]
 gi|322118955|gb|EFX91132.1| ribonucleoside-diphosphate reductase beta subunit [Actinobacillus
           ureae ATCC 25976]
          Length = 326

 Score = 40.4 bits (93), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 8/123 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60
           ++E +H  FGI +   ++ E+  L+T EF ++ +T+  +A   E         +G +  +
Sbjct: 195 KEEEIHGKFGIALYEILRDEHSELFTPEFFEELKTLSTQAFEAECGILDWIFEEGDLSFI 254

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENP-----FPWMSEVIDLKKEKNFFETRVTE 115
           +  + E Y++   N     +GLEP   Y  NP       W    I   KE +FF  R T+
Sbjct: 255 SREAVENYIRSRYNNSLMTLGLEP--PYDVNPELLKETEWFDIEILSTKETDFFNKRSTD 312

Query: 116 YQQ 118
           Y +
Sbjct: 313 YSK 315


>gi|228926484|ref|ZP_04089556.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228833308|gb|EEM78873.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
          Length = 322

 Score = 40.4 bits (93), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 5/117 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AYA E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYAEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304


>gi|34419511|ref|NP_899524.1| aerobic ribonucleoside diphosphate reductase small subunit [Vibrio
           phage KVP40]
 gi|34333192|gb|AAQ64347.1| aerobic ribonucleoside diphosphate reductase small subunit [Vibrio
           phage KVP40]
          Length = 374

 Score = 40.4 bits (93), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 5/100 (5%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKGF 57
           RDE LHL     +I+  Q   ++P +   +   Q ++  +  +    E  +AH    +G 
Sbjct: 235 RDEQLHLKGTQALISIWQNYKDDPEMAEISLRLQPEAEKIFMQVVDQEKEWAHSLFSQGT 294

Query: 58  V-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
           V GLNA    +Y++++A+ R   +GL   +   ++P PW+
Sbjct: 295 VPGLNAQILCEYVEYLADSRMRSVGLNSPYPRRKHPLPWI 334


>gi|332974193|gb|EGK11127.1| ribonucleotide-diphosphate reductase beta subunit [Psychrobacter
           sp. 1501(2011)]
          Length = 377

 Score = 40.0 bits (92), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN +    ++P +    ++ +++S  +  +A   E  +A      G 
Sbjct: 237 RDEALHLTSTQHMINILASGKDDPEMAEIAEDCREESIEIFRKAAEQEKEWAGYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS 97
            +GLN     QY+++I N R   +GL  +F  ++ NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNLRMEAVGLPSIFPDSKSNPIPWIN 338


>gi|269862698|ref|XP_002650940.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220065381|gb|EED43116.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 332

 Score = 40.0 bits (92), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 10/95 (10%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H +          ++ EA  +E  +  E++P   +G+N
Sbjct: 247 RDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMN 297

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
                QY++F+A+R    +G + ++  +  PF +M
Sbjct: 298 CKLMCQYIEFVADRLLFALGEKKIYNVS-TPFDFM 331


>gi|254672337|emb|CBA05511.1| ribonucleoside-diphosphate reductase beta chain [Neisseria
           meningitidis alpha275]
          Length = 345

 Score = 40.0 bits (92), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 345


>gi|319957101|ref|YP_004168364.1| ribonucleoside-diphosphate reductase [Nitratifractor salsuginis DSM
           16511]
 gi|319419505|gb|ADV46615.1| Ribonucleoside-diphosphate reductase [Nitratifractor salsuginis DSM
           16511]
          Length = 337

 Score = 40.0 bits (92), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 15/128 (11%)

Query: 2   RDE-SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH---ETMPKGF 57
           RDE + HL    ++   I  EN          K+  M+ EA  +E+ Y     E  P   
Sbjct: 210 RDEINTHLPLFANIFKTIYKENK--IPASIVDKAYEMIQEAVDIELEYGKYLLENYP--I 265

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID--LKK---EKNFFETR 112
           +GL     E+ +   AN R ++IGLEP+F+  E P  ++ ++++  LK      NFFE+ 
Sbjct: 266 MGLTDELMEKTVYNYANDRLNKIGLEPIFE--ETPQTYLQKLVEKHLKMNDVRSNFFESN 323

Query: 113 VTEYQQGA 120
           V  Y + +
Sbjct: 324 VANYAKNS 331


>gi|237808189|ref|YP_002892629.1| ribonucleotide-diphosphate reductase subunit beta [Tolumonas
           auensis DSM 9187]
 gi|237500450|gb|ACQ93043.1| ribonucleotide reductase [Tolumonas auensis DSM 9187]
          Length = 377

 Score = 39.7 bits (91), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKIEN--PHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  N  P +    +E   +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNILREGNDDPEMAEIARELHDECFALFKKAAEQEKEWASYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMS 97
            +GLN     QY++FI N R   +GL   F    +NP PW++
Sbjct: 297 MLGLNKDILCQYVEFITNVRMQGVGLPLAFDADRQNPLPWIN 338


>gi|251792578|ref|YP_003007304.1| ribonucleoside-diphosphate reductase subunit beta [Aggregatibacter
           aphrophilus NJ8700]
 gi|247533971|gb|ACS97217.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           aphrophilus NJ8700]
          Length = 329

 Score = 39.7 bits (91), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 8/123 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60
           ++E +H  FGI + + ++ E P L+T  F  + + +  +A   E    +     G +  L
Sbjct: 198 KEEEIHGRFGITLYSILREEQPELFTDAFFTELKELADQAFTAEKEILNWIFEDGELDFL 257

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENP-----FPWMSEVIDLKKEKNFFETRVTE 115
           +  + E Y+    N     +GLEP   Y  NP       W    I   KE +FF  R T+
Sbjct: 258 SKATVENYIANRYNNSLQALGLEP--AYNINPEQLKETEWFDIEILSTKETDFFNKRSTD 315

Query: 116 YQQ 118
           Y +
Sbjct: 316 YSK 318


>gi|296316020|ref|YP_003662484.1| ribonucleotide reductase subunit 2 [Bovine herpesvirus 5]
 gi|40456143|gb|AAR86121.1| UL40 ribonucleotide reductase small subunit [Bovine herpesvirus 5]
          Length = 315

 Score = 39.7 bits (91), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 15/120 (12%)

Query: 2   RDESLHLNFGIDVINQ-IKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE++H      + N  +  E P         + R +  EA  +E  +     P+G   L
Sbjct: 198 RDEAVHTTASCCIFNNYLGGERPP------PDRVRKLFREAVEIEREFIWSRAPRGSHIL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY----TENPFPWMSEVIDLKKEKNFFETRVTEY 116
           +  +   Y+++ A+R    I L PLF      T+ P   M+     +K  NFFE R T Y
Sbjct: 252 DVEAISAYVEYSADRLLAAIHLPPLFGTPPPGTDFPLALMTA----EKHTNFFERRSTTY 307


>gi|157955336|gb|ABW06046.1| NrdF [Bacillus thuringiensis serovar kurstaki]
          Length = 322

 Score = 39.7 bits (91), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 5/124 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E + +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSVEEQQEVQKETQELLMELSEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                 +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y + 
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVKA 307

Query: 120 AELK 123
             ++
Sbjct: 308 TNVE 311


>gi|38638230|ref|NP_944413.1| ribonucleotide reductase subunit 2 [Psittacid herpesvirus 1]
 gi|81987371|sp|Q6UDJ1|RIR2_PSHV1 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|34500236|gb|AAQ73719.1| unknown [Psittacid herpesvirus 1]
          Length = 313

 Score = 39.7 bits (91), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 10/119 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N     +P    K   Q    +  EA  +E  +     PK    ++
Sbjct: 195 RDETIHTTASCCIYNNWLKGHPKPSVKRIHQ----LFKEAVEIECDFLVARAPKAARLID 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
             + + +++F ANR    IG+  ++   ++P P   +   ++ L+K  NFFE R T Y 
Sbjct: 251 IDAIQSFVRFTANRWLSMIGVPTIY---DDPAPDPTFPLALMSLEKNVNFFEHRSTAYS 306


>gi|182682906|ref|YP_001837030.1| putative aerobic ribonucleoside diphosphate reductase, small
           subunit [Enterobacteria phage EPS7]
 gi|182630618|gb|ACB97550.1| putative aerobic ribonucleoside diphosphate reductase, small
           subunit [Enterobacteria phage EPS7]
          Length = 381

 Score = 39.3 bits (90), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 4/104 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGL 60
           +DE+LH      +I  +  +       E   K+ T L +    EI + H     +  +GL
Sbjct: 237 KDEALHTQMSKAIIQIMFQQFDKDLVDEALAKAPTQLLKTLKTEIEWGHFIFKGRSLIGL 296

Query: 61  NAPSCEQYMQFIANRRCHQIGLE---PLFKYTENPFPWMSEVID 101
           NA   E+Y+ F+       IG+E    L   T+NP PW+   +D
Sbjct: 297 NAELLEEYLYFVGRNAFMHIGVEWPSHLPVITKNPIPWIMNWLD 340


>gi|294338336|emb|CBJ94375.1| Probable ribonucleotide reductase (small subunit) [Campylobacter
           phage CPt10]
          Length = 369

 Score = 39.3 bits (90), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 10/124 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENP-----HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
           RDE+LHL    ++I +I   +P     + W       +   L EA   E  +      KG
Sbjct: 226 RDENLHLAITQNLI-KILSRSPEEGFINAWNSIKDNITDRYL-EAADQEFKWIDYLFSKG 283

Query: 57  -FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRV 113
            F+G+     + Y++++ N+R   IG + +F  + +NP PW+   I+  K +    E+ +
Sbjct: 284 AFLGMTPELAKNYIKYLINKRLKAIGFKEVFAGFNKNPIPWVETYINYDKNEVLPQESEI 343

Query: 114 TEYQ 117
           T Y+
Sbjct: 344 TNYK 347


>gi|294338139|emb|CBJ93977.1| Probable ribonucleotide reductase (small subunit) [Campylobacter
           phage CP220]
          Length = 369

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 10/124 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENP-----HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
           RDE+LHL    ++I +I   +P     + W       +   L EA   E  +      KG
Sbjct: 226 RDENLHLAITQNLI-KILSRSPEEGFINAWNSIKDNITDRYL-EAADQEFKWIDYLFSKG 283

Query: 57  -FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRV 113
            F+G+     + Y++++ N+R   IG + +F  + +NP PW+   I+  K +    E+ +
Sbjct: 284 AFLGMTPELAKNYIKYLINKRLKAIGFKEVFAGFNKNPIPWVETYINYDKNEVLPQESEI 343

Query: 114 TEYQ 117
           T Y+
Sbjct: 344 TNYK 347


>gi|254362523|ref|ZP_04978626.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica PHL213]
 gi|153094123|gb|EDN75022.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica PHL213]
          Length = 293

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 12/125 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60
           ++E +H  FGI +   ++ E+  L+T EF +  +T+ ++A   E         +G +  +
Sbjct: 162 KEEEIHGKFGIALYEILRDEHSELFTPEFFEDLQTLANQAFEAERGILDWIFEEGDLSFI 221

Query: 61  NAPSCEQYMQFIANRRCHQIGLEP-------LFKYTENPFPWMSEVIDLKKEKNFFETRV 113
              + E Y++   N     +GLEP       L K TE    W    I   KE +FF  R 
Sbjct: 222 TKATVENYIKNRYNNSLSILGLEPPHDIDPELLKETE----WFDIEILSTKETDFFNKRS 277

Query: 114 TEYQQ 118
           T+Y +
Sbjct: 278 TDYSK 282


>gi|261494146|ref|ZP_05990649.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica serotype A2 str. BOVINE]
 gi|261310312|gb|EEY11512.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica serotype A2 str. BOVINE]
          Length = 325

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 12/125 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60
           ++E +H  FGI +   ++ E+  L+T EF +  +T+ ++A   E         +G +  +
Sbjct: 194 KEEEIHGKFGIALYEILRDEHSELFTPEFFEDLQTLANQAFEAERGILDWIFEEGDLSFI 253

Query: 61  NAPSCEQYMQFIANRRCHQIGLEP-------LFKYTENPFPWMSEVIDLKKEKNFFETRV 113
              + E Y++   N     +GLEP       L K TE    W    I   KE +FF  R 
Sbjct: 254 TKATVENYIKNRYNNSLSILGLEPPHDIDPELLKETE----WFDIEILSTKETDFFNKRS 309

Query: 114 TEYQQ 118
           T+Y +
Sbjct: 310 TDYSK 314


>gi|132618|sp|P26713|RIR2_ASFM2 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 327

 Score = 39.3 bits (90), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE---IAYAHETMPKGFV 58
           RDE +H +F   +I+      P       ++    +L EA  L    I YA +       
Sbjct: 196 RDEGMHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFINYAFDKARGRVP 249

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117
           G +     QY+++  +  C  +  + ++    NPFP M++    + EK NFFE R T+YQ
Sbjct: 250 GFSKEMLFQYIRYFTDNLCFMMQCKSIYN-VGNPFPQMTKFFLNEVEKTNFFELRPTQYQ 308


>gi|53728876|ref|ZP_00348266.1| COG0208: Ribonucleotide reductase, beta subunit [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126207635|ref|YP_001052860.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           pleuropneumoniae L20]
 gi|165975603|ref|YP_001651196.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|190149418|ref|YP_001967943.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|303249851|ref|ZP_07336055.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|303251971|ref|ZP_07338142.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307247133|ref|ZP_07529185.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
 gi|307249355|ref|ZP_07531349.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 4 str. M62]
 gi|307251676|ref|ZP_07533581.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|307253912|ref|ZP_07535764.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|307256172|ref|ZP_07537959.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 10 str. D13039]
 gi|307258366|ref|ZP_07540107.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 11 str. 56153]
 gi|307260605|ref|ZP_07542297.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
 gi|307262736|ref|ZP_07544363.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 13 str. N273]
 gi|126096427|gb|ABN73255.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|165875704|gb|ABY68752.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|189914549|gb|ACE60801.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302649401|gb|EFL79586.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|302651418|gb|EFL81570.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306856382|gb|EFM88533.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
 gi|306858649|gb|EFM90711.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 4 str. M62]
 gi|306860873|gb|EFM92881.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|306863116|gb|EFM95058.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|306865353|gb|EFM97249.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 10 str. D13039]
 gi|306867550|gb|EFM99397.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 11 str. 56153]
 gi|306869682|gb|EFN01467.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
 gi|306871881|gb|EFN03598.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 13 str. N273]
          Length = 325

 Score = 39.3 bits (90), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 8/123 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60
           ++E +H  FGI +   ++ E+  L+T EF +  +T+  +A   E         +G +  +
Sbjct: 194 KEEEIHGKFGIALYEILREEHSELFTPEFFEDLKTLSSQAFEAECGILDWIFEEGDLSFI 253

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENP-----FPWMSEVIDLKKEKNFFETRVTE 115
           +    E Y++   N     +GLEP   Y  NP       W    I   KE +FF  R T+
Sbjct: 254 SREEVENYIRSRYNNSLMTLGLEP--PYDVNPELLKETEWFDIEILSTKETDFFNKRSTD 311

Query: 116 YQQ 118
           Y +
Sbjct: 312 YSK 314


>gi|238897538|ref|YP_002923217.1| ribonucleoside-diphosphate reductase 1, beta subunit [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|229465295|gb|ACQ67069.1| ribonucleoside-diphosphate reductase 1, beta subunit [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 376

 Score = 39.3 bits (90), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 7/102 (6%)

Query: 2   RDESLHL---NFGIDVINQIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
           RDE+LHL      +D++   K ++P +    +E QQ+   +   A   E  +A      G
Sbjct: 237 RDEALHLMGTQHMLDLMRSGK-DDPEMADIAQECQQECSDLFLLAAQQEKEWAAYLFRDG 295

Query: 57  -FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
             +GLN     QY++++ N R   + L+  F    NP PW++
Sbjct: 296 SMIGLNQDILCQYIEYMTNIRMQAVKLDAPFSIRTNPIPWIN 337


>gi|255683173|ref|YP_003084381.1| UL40 [Duck enteritis virus]
 gi|158343199|gb|ABW35292.1| ribonucleotide reductase subunit 2 [Anatid herpesvirus 1]
 gi|208401182|gb|ACI26683.1| UL40 [Anatid herpesvirus 1]
 gi|254839988|gb|ACT83534.1| UL40 [Anatid herpesvirus 1]
          Length = 355

 Score = 38.9 bits (89), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 8/117 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
           RDE++H      + N+      HL  + K    +   +  EA  LE  +     P     
Sbjct: 237 RDETIHTKASCVIYNK------HLQKYKKPSTCRIYKLFSEAVKLECEFLRARAPSDSAI 290

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
           ++  +   Y++F A+R    IGL PLF        +    +   ++ NFFE R T Y
Sbjct: 291 IDTEAICSYVRFNADRLLSDIGLAPLFDEPPPKHDFPLAFMATSQQTNFFERRNTTY 347


>gi|152991848|ref|YP_001357569.1| ribonucleoside-diphosphate reductase, beta subunit [Sulfurovum sp.
           NBC37-1]
 gi|151423709|dbj|BAF71212.1| ribonucleoside-diphosphate reductase, beta subunit [Sulfurovum sp.
           NBC37-1]
          Length = 337

 Score = 38.9 bits (89), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 11/126 (8%)

Query: 2   RDE-SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
           RDE + HL    ++   I+ EN ++ T       + M+ +A  +E+ Y H  + +   +G
Sbjct: 210 RDELNTHLPLFANIFKTIQKEN-NIATSTIDAAYK-MIQDAVKIELEYGHYLLDQFPIMG 267

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-----KNFFETRVT 114
           +     EQ +   AN R  +IGL+P+F   E+   ++ +++    E      NFFE+ V+
Sbjct: 268 VTHELMEQTVYNYANDRLKKIGLDPIFD--ESATTYLQKLVTKHLEMNEVKSNFFESNVS 325

Query: 115 EYQQGA 120
            Y + +
Sbjct: 326 NYAKSS 331


>gi|218233288|ref|YP_002366135.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           B4264]
 gi|229149653|ref|ZP_04277884.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           m1550]
 gi|157955328|gb|ABW06040.1| NrdF [Bacillus thuringiensis serovar entomocidus]
 gi|157955388|gb|ABW06085.1| NrdF [Bacillus thuringiensis serovar subtoxicus]
 gi|157955409|gb|ABW06101.1| NrdF [Bacillus cereus]
 gi|218161245|gb|ACK61237.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           B4264]
 gi|228633863|gb|EEK90461.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           m1550]
          Length = 322

 Score = 38.9 bits (89), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQDLLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304


>gi|94676795|ref|YP_588829.1| ribonucleotide-diphosphate reductase subunit beta [Baumannia
           cicadellinicola str. Hc (Homalodisca coagulata)]
 gi|94219945|gb|ABF14104.1| ribonucleoside-diphosphate reductase, beta subunit [Baumannia
           cicadellinicola str. Hc (Homalodisca coagulata)]
          Length = 376

 Score = 38.9 bits (89), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +++  ++P +     E Q  S  +   A   E  +A      G 
Sbjct: 237 RDEALHLAGTQHMLNLMRLGKDDPEMADIALECQHDSYHLFLXAANQEKDWASYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   + L+  F    NP PW++
Sbjct: 297 MIGLNEEILCQYIEYITNIRMQAVLLDLPFATRSNPIPWIN 337


>gi|229189534|ref|ZP_04316550.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 10876]
 gi|228593979|gb|EEK51782.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 10876]
          Length = 322

 Score = 38.9 bits (89), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAKEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304


>gi|228990454|ref|ZP_04150419.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           pseudomycoides DSM 12442]
 gi|228996556|ref|ZP_04156195.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           Rock3-17]
 gi|229004206|ref|ZP_04162007.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           Rock1-4]
 gi|228757067|gb|EEM06311.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           Rock1-4]
 gi|228763188|gb|EEM12096.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           Rock3-17]
 gi|228768980|gb|EEM17578.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           pseudomycoides DSM 12442]
          Length = 322

 Score = 38.9 bits (89), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAEFSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPRFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304


>gi|312130784|ref|YP_003998124.1| ribonucleotide reductase [Leadbetterella byssophila DSM 17132]
 gi|311907330|gb|ADQ17771.1| ribonucleotide reductase [Leadbetterella byssophila DSM 17132]
          Length = 324

 Score = 38.9 bits (89), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 4/120 (3%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LN 61
           DE +H N GI ++N I+ E P  +  E   +    + E+  +E         +G +  + 
Sbjct: 194 DEQIHANGGIYIVNTIRDEFPDFFDPETITQIEDTVRESIEVEERILDWIFSEGEIEIIK 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                 +M+F  +    +IG  PLF  +     P  W  E +      +FF  R  +Y +
Sbjct: 254 KKDLLNFMKFRIDDSMKKIGFSPLFHVSSADYQPIAWFEEEVFANSLDDFFAKRPVDYTK 313


>gi|213420352|ref|ZP_03353418.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
          enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 88

 Score = 38.9 bits (89), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 15/42 (35%), Positives = 24/42 (57%)

Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 8  SMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 49


>gi|213855386|ref|ZP_03383626.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
          enterica subsp. enterica serovar Typhi str. M223]
          Length = 80

 Score = 38.9 bits (89), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 24/41 (58%)

Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
           +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 1  MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 41


>gi|228907084|ref|ZP_04070948.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 200]
 gi|157955401|gb|ABW06095.1| NrdF [Bacillus thuringiensis serovar toumanoffi]
 gi|228852588|gb|EEM97378.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 200]
          Length = 322

 Score = 38.9 bits (89), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304


>gi|228938567|ref|ZP_04101175.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228971446|ref|ZP_04132072.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228978059|ref|ZP_04138438.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis Bt407]
 gi|157955340|gb|ABW06049.1| NrdF [Bacillus thuringiensis serovar thuringiensis]
 gi|157955368|gb|ABW06070.1| NrdF [Bacillus thuringiensis serovar galechiae]
 gi|157955384|gb|ABW06082.1| NrdF [Bacillus thuringiensis serovar sotto]
 gi|228781720|gb|EEM29919.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis Bt407]
 gi|228788313|gb|EEM36266.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228821165|gb|EEM67182.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|326939076|gb|AEA14972.1| ribonucleotide-diphosphate reductase [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 322

 Score = 38.9 bits (89), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304


>gi|75759355|ref|ZP_00739452.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|218896385|ref|YP_002444796.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           G9842]
 gi|228900033|ref|ZP_04064269.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 4222]
 gi|228920164|ref|ZP_04083513.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228964415|ref|ZP_04125529.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|74493187|gb|EAO56306.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|157955348|gb|ABW06055.1| NrdF [Bacillus thuringiensis serovar alesti]
 gi|157955356|gb|ABW06061.1| NrdF [Bacillus thuringiensis serovar dakota]
 gi|157955360|gb|ABW06064.1| NrdF [Bacillus thuringiensis serovar darmstadiensis]
 gi|157955364|gb|ABW06067.1| NrdF [Bacillus thuringiensis serovar dendrolimus]
 gi|157955380|gb|ABW06079.1| NrdF [Bacillus thuringiensis serovar ostriniae]
 gi|218545942|gb|ACK98336.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           G9842]
 gi|228795272|gb|EEM42764.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228839620|gb|EEM84912.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228859647|gb|EEN04071.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 4222]
          Length = 322

 Score = 38.9 bits (89), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304


>gi|229177859|ref|ZP_04305232.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           172560W]
 gi|228605650|gb|EEK63098.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           172560W]
          Length = 322

 Score = 38.9 bits (89), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304


>gi|229057079|ref|ZP_04196471.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH603]
 gi|228720220|gb|EEL71799.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH603]
          Length = 322

 Score = 38.9 bits (89), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 5/124 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q +++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFTELSAKEQQEVQTETQELLMELYEIELAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                 +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y + 
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVKA 307

Query: 120 AELK 123
             ++
Sbjct: 308 TNVE 311


>gi|157955376|gb|ABW06076.1| NrdF [Bacillus thuringiensis serovar morrisoni]
          Length = 322

 Score = 38.9 bits (89), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 5/124 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                 +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y + 
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVKA 307

Query: 120 AELK 123
             ++
Sbjct: 308 TNVE 311


>gi|213581345|ref|ZP_03363171.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
          enterica subsp. enterica serovar Typhi str. E98-0664]
          Length = 90

 Score = 38.9 bits (89), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 15/42 (35%), Positives = 24/42 (57%)

Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 10 SMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 51


>gi|330004285|ref|ZP_08304843.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
 gi|328536657|gb|EGF62979.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
          Length = 380

 Score = 38.5 bits (88), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 8/103 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIA-----YAHETMPKG 56
           RDE+LH      ++  ++     L  K+  ++    +++ T+L++A     +A      G
Sbjct: 239 RDEALHCEGTERMLRNMRNGREGLLWKQIAEEEEPFVYQ-TMLDVAEQEMRWADYLFKDG 297

Query: 57  -FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 97
             +GLNA   +QY+++  N    ++ L PLF   T +P PWM+
Sbjct: 298 SMIGLNAKILKQYVKYRTNLAMKRLHLNPLFDDVTFDPLPWMN 340


>gi|307244959|ref|ZP_07527056.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|306854124|gb|EFM86332.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
          Length = 325

 Score = 38.5 bits (88), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 8/123 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60
           ++E +H  FGI +   ++ E+  L+T EF +  +T+  +A   E         +G +  +
Sbjct: 194 KEEEIHGKFGIVLYEILREEHSELFTPEFFEDLKTLSSQAFEAECGILDWIFEEGDLSFI 253

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENP-----FPWMSEVIDLKKEKNFFETRVTE 115
           +    E Y++   N     +GLEP   Y  NP       W    I   KE +FF  R T+
Sbjct: 254 SREEVENYIRSRYNNSLMTLGLEP--PYDVNPELLKETEWFDIEILSTKETDFFNKRSTD 311

Query: 116 YQQ 118
           Y +
Sbjct: 312 YSK 314


>gi|30019505|ref|NP_831136.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           ATCC 14579]
 gi|229043194|ref|ZP_04190917.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH676]
 gi|229078637|ref|ZP_04211194.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock4-2]
 gi|229108909|ref|ZP_04238513.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock1-15]
 gi|229126769|ref|ZP_04255781.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-Cer4]
 gi|229144056|ref|ZP_04272472.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-ST24]
 gi|296502033|ref|YP_003663733.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis BMB171]
 gi|29895049|gb|AAP08337.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 14579]
 gi|157955310|gb|ABW06026.1| NrdF [Bacillus thuringiensis serovar canadensis]
 gi|157955392|gb|ABW06088.1| NrdF [Bacillus thuringiensis serovar thompsoni]
 gi|157955396|gb|ABW06091.1| NrdF [Bacillus thuringiensis serovar tohokuensis]
 gi|228639453|gb|EEK95867.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-ST24]
 gi|228656709|gb|EEL12535.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-Cer4]
 gi|228674565|gb|EEL29805.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock1-15]
 gi|228704707|gb|EEL57136.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock4-2]
 gi|228726156|gb|EEL77390.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH676]
 gi|296323085|gb|ADH06013.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis BMB171]
          Length = 322

 Score = 38.5 bits (88), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304


>gi|304373620|ref|YP_003858365.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB16]
 gi|299829576|gb|ADJ55369.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB16]
          Length = 391

 Score = 38.5 bits (88), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 5/102 (4%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHLWTKEFQ--QKSRTMLHEATLLEIAYAHETMPKGF 57
           RDE+LH       I   Q+  ++P +    FQ  +++  +  E    E  +A      G 
Sbjct: 249 RDEALHQKGTQSKIRLWQMGKDDPEMAEIAFQYEEEATQIFLEVYEQEKEWAEHLFSIGD 308

Query: 58  V-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE 98
           V G++  S   Y++ + ++R   +GL+  FK + NP+PWM++
Sbjct: 309 VDGVSLKSTIAYIEHLTDQRMRAVGLQSPFKPSPNPYPWMNK 350


>gi|148653376|ref|YP_001280469.1| ribonucleotide-diphosphate reductase subunit beta [Psychrobacter
           sp. PRwf-1]
 gi|148572460|gb|ABQ94519.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Psychrobacter sp. PRwf-1]
          Length = 377

 Score = 38.5 bits (88), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN +    ++P +   + +   +S  +  +A   E  +A      G 
Sbjct: 237 RDEALHLTSTQHMINIMASGKDDPEMAEISAQCHNESIEIFRKAAEQEKEWAGYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS 97
            +GLN     QY+++I N R   +GL  +F  ++ NP PW++
Sbjct: 297 MIGLNKDILCQYVEYITNLRMEAVGLPGIFPESKSNPIPWIN 338


>gi|157955319|gb|ABW06033.1| NrdF [Bacillus thuringiensis serovar pakistani]
          Length = 322

 Score = 38.5 bits (88), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 5/124 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSTEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                 +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y + 
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVKA 307

Query: 120 AELK 123
             ++
Sbjct: 308 TNVE 311


>gi|229084444|ref|ZP_04216723.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-44]
 gi|228698872|gb|EEL51578.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-44]
          Length = 322

 Score = 38.5 bits (88), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTDEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y
Sbjct: 250 -VEEVNRFVRYNANKGLMNLGLEPRFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304


>gi|146329200|ref|YP_001209518.1| ribonucleotide reductase, beta subunit [Dichelobacter nodosus
           VCS1703A]
 gi|146232670|gb|ABQ13648.1| ribonucleotide reductase, beta subunit [Dichelobacter nodosus
           VCS1703A]
          Length = 325

 Score = 38.5 bits (88), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 4/121 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60
           ++E +H  FGI + + IK E+P L+T  F    +T+  +A   E    +     G +  L
Sbjct: 194 KEEEIHGRFGIALYHIIKEEHPDLFTDSFYHHLKTLADQALAAERGILNWIFENGDLPFL 253

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
              + E Y+    N     +G+E  +   E       W    I   KE +FF  R T+Y 
Sbjct: 254 QQKTVENYIVNRYNNSLSVLGIESPYTVDEERLKETQWFDIEILSGKENDFFYKRSTDYS 313

Query: 118 Q 118
           +
Sbjct: 314 K 314


>gi|30261453|ref|NP_843830.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Ames]
 gi|47526645|ref|YP_017994.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49184287|ref|YP_027539.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Sterne]
 gi|49477196|ref|YP_035577.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|65318723|ref|ZP_00391682.1| COG0208: Ribonucleotide reductase, beta subunit [Bacillus anthracis
           str. A2012]
 gi|118476922|ref|YP_894073.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis str. Al Hakam]
 gi|165870361|ref|ZP_02215016.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0488]
 gi|167634337|ref|ZP_02392658.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0442]
 gi|167639338|ref|ZP_02397610.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0193]
 gi|170686782|ref|ZP_02878002.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0465]
 gi|170706310|ref|ZP_02896771.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0389]
 gi|177651561|ref|ZP_02934350.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0174]
 gi|190568085|ref|ZP_03020995.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis Tsiankovskii-I]
 gi|196035278|ref|ZP_03102683.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           W]
 gi|196046555|ref|ZP_03113780.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           03BB108]
 gi|218902561|ref|YP_002450395.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           AH820]
 gi|225863317|ref|YP_002748695.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           03BB102]
 gi|227815798|ref|YP_002815807.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. CDC 684]
 gi|228914025|ref|ZP_04077647.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228932735|ref|ZP_04095607.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228945050|ref|ZP_04107411.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|229090407|ref|ZP_04221650.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-42]
 gi|229120993|ref|ZP_04250235.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           95/8201]
 gi|229183646|ref|ZP_04310869.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BGSC 6E1]
 gi|229602752|ref|YP_002865867.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0248]
 gi|254682483|ref|ZP_05146344.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. CNEVA-9066]
 gi|254726146|ref|ZP_05187928.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. A1055]
 gi|254733899|ref|ZP_05191613.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Western North America USA6153]
 gi|254740411|ref|ZP_05198102.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Kruger B]
 gi|254753802|ref|ZP_05205837.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Vollum]
 gi|254758897|ref|ZP_05210924.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Australia 94]
 gi|301052993|ref|YP_003791204.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis CI]
 gi|30255307|gb|AAP25316.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. Ames]
 gi|47501793|gb|AAT30469.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49178214|gb|AAT53590.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. Sterne]
 gi|49328752|gb|AAT59398.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|72414680|emb|CAG28950.1| ribonucleoside-diphosphate reductase class Ib beta chain [Bacillus
           anthracis]
 gi|118416147|gb|ABK84566.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Bacillus thuringiensis str. Al Hakam]
 gi|157955314|gb|ABW06029.1| NrdF [Bacillus thuringiensis serovar finitimus]
 gi|164713856|gb|EDR19378.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0488]
 gi|167512777|gb|EDR88151.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0193]
 gi|167530225|gb|EDR92951.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0442]
 gi|170128844|gb|EDS97710.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0389]
 gi|170669305|gb|EDT20048.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0465]
 gi|172082839|gb|EDT67902.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0174]
 gi|190560819|gb|EDV14794.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis Tsiankovskii-I]
 gi|195991955|gb|EDX55918.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           W]
 gi|196022739|gb|EDX61421.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           03BB108]
 gi|218537212|gb|ACK89610.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           AH820]
 gi|225785957|gb|ACO26174.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           03BB102]
 gi|227004217|gb|ACP13960.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. CDC 684]
 gi|228599889|gb|EEK57486.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BGSC 6E1]
 gi|228662653|gb|EEL18251.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           95/8201]
 gi|228692990|gb|EEL46708.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-42]
 gi|228814719|gb|EEM60979.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228826940|gb|EEM72702.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228845630|gb|EEM90659.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|229267160|gb|ACQ48797.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0248]
 gi|300375162|gb|ADK04066.1| ribonucleotide-diphosphate reductase beta subunit [Bacillus cereus
           biovar anthracis str. CI]
 gi|324325470|gb|ADY20730.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 322

 Score = 38.5 bits (88), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 5/124 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                 +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y + 
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVKA 307

Query: 120 AELK 123
             ++
Sbjct: 308 TNVE 311


>gi|163939261|ref|YP_001644145.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           weihenstephanensis KBAB4]
 gi|229010750|ref|ZP_04167947.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           DSM 2048]
 gi|229132251|ref|ZP_04261107.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-ST196]
 gi|229166287|ref|ZP_04294046.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH621]
 gi|163861458|gb|ABY42517.1| Ribonucleoside-diphosphate reductase [Bacillus weihenstephanensis
           KBAB4]
 gi|228617232|gb|EEK74298.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH621]
 gi|228651189|gb|EEL07168.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-ST196]
 gi|228750424|gb|EEM00253.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           DSM 2048]
          Length = 322

 Score = 38.5 bits (88), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 5/124 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q +++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFTELSAEEQQEVQTETQELLMELYEIELAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                 +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y + 
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVKA 307

Query: 120 AELK 123
             ++
Sbjct: 308 TNVE 311


>gi|193206379|ref|NP_500944.2| hypothetical protein F58F9.1 [Caenorhabditis elegans]
          Length = 581

 Score = 38.5 bits (88), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 43/73 (58%), Gaps = 2/73 (2%)

Query: 37  MLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
           +++E+ L+E  +  E++P   +G+N     +Y++F+A+    ++G    +  T+N F +M
Sbjct: 511 IINESVLVEQDFVRESLPTNLIGMNQHMMCKYVEFVADLLLEELGYSKRYN-TKNLFDFM 569

Query: 97  SEVIDLKKEKNFF 109
            E I ++ + NFF
Sbjct: 570 -ENISIEGKTNFF 581


>gi|47566242|ref|ZP_00237270.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           G9241]
 gi|47556795|gb|EAL15126.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           G9241]
          Length = 322

 Score = 38.5 bits (88), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304


>gi|302321458|gb|ADL16651.1| RNR2 [Abalone herpesvirus Victoria/AUS/2007]
          Length = 642

 Score = 38.5 bits (88), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 62/121 (51%), Gaps = 14/121 (11%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DE+LH +F   + N +         +   +K + ++ +A  +EIA+A   + +    +N 
Sbjct: 249 DETLHGSFYAALHNIMP-------DRASPEKVKEIIVKAVEIEIAFAMSIVTEDLEHINP 301

Query: 63  PSCEQYMQFIANRRCHQIGLEPLF--KYTE----NPFPWMSEVIDLKKEKNFFETRVTEY 116
            S + +++  AN  C  +G+EP++  ++T+    +P  +M+    L+K  NFFE R  +Y
Sbjct: 302 SSMQLHIKATANLCCEFLGVEPIYFDRWTKLPVVSPLSYMNNYETLQK-FNFFEVRNMDY 360

Query: 117 Q 117
            
Sbjct: 361 S 361


>gi|52143985|ref|YP_082843.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           E33L]
 gi|228984529|ref|ZP_04144706.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|229155020|ref|ZP_04283134.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 4342]
 gi|51977454|gb|AAU19004.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           E33L]
 gi|157955324|gb|ABW06037.1| NrdF [Bacillus thuringiensis serovar tochigiensis]
 gi|228628578|gb|EEK85291.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 4342]
 gi|228775232|gb|EEM23621.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 322

 Score = 38.5 bits (88), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304


>gi|42780545|ref|NP_977792.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           ATCC 10987]
 gi|42736465|gb|AAS40400.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           ATCC 10987]
          Length = 322

 Score = 38.5 bits (88), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 5/124 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                 +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y + 
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVKA 307

Query: 120 AELK 123
             ++
Sbjct: 308 TNVE 311


>gi|229102053|ref|ZP_04232765.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-28]
 gi|228681373|gb|EEL35538.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-28]
          Length = 322

 Score = 38.5 bits (88), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  Q+  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQLFAELSAEDQQEVQKETQVLLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y
Sbjct: 250 -VDDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304


>gi|157955305|gb|ABW06022.1| NrdF [Bacillus thuringiensis serovar aizawai]
 gi|157955352|gb|ABW06058.1| NrdF [Bacillus thuringiensis serovar colmeri]
 gi|157955372|gb|ABW06073.1| NrdF [Bacillus thuringiensis serovar indiana]
 gi|157955405|gb|ABW06098.1| NrdF [Bacillus thuringiensis serovar wuhanensis]
          Length = 322

 Score = 38.1 bits (87), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 5/124 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSVEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                 +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y + 
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVKA 307

Query: 120 AELK 123
             ++
Sbjct: 308 TNVE 311


>gi|157955332|gb|ABW06043.1| NrdF [Bacillus thuringiensis serovar galleriae]
 gi|157955344|gb|ABW06052.1| NrdF [Bacillus thuringiensis serovar tolworthi]
          Length = 322

 Score = 38.1 bits (87), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 5/124 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSVEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                 +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y + 
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVKA 307

Query: 120 AELK 123
             ++
Sbjct: 308 TNVE 311


>gi|212712302|ref|ZP_03320430.1| hypothetical protein PROVALCAL_03388 [Providencia alcalifaciens DSM
           30120]
 gi|212685048|gb|EEB44576.1| hypothetical protein PROVALCAL_03388 [Providencia alcalifaciens DSM
           30120]
          Length = 380

 Score = 38.1 bits (87), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 15/42 (35%), Positives = 24/42 (57%)

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
             +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 300 SMIGLNKDILCQYVEYITNIRMQAVGLKLPFEARSNPIPWIN 341


>gi|152974880|ref|YP_001374397.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           subsp. cytotoxis NVH 391-98]
 gi|152023632|gb|ABS21402.1| Ribonucleoside-diphosphate reductase [Bacillus cytotoxicus NVH
           391-98]
          Length = 322

 Score = 38.1 bits (87), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 7/118 (5%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
           +RDES+H  F   +  QI  E      ++ Q++++ +L E   +E AY  E     G VG
Sbjct: 192 IRDESIHGVFVGLLAQQIFAELSAEEQEDVQKETQDLLMELYEIETAYTEEIYASIGLVG 251

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116
                  +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y
Sbjct: 252 ----EVNRFVRYNANKGLMNLGLEPRFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304


>gi|255535950|ref|YP_003096321.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Flavobacteriaceae bacterium 3519-10]
 gi|255342146|gb|ACU08259.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Flavobacteriaceae bacterium 3519-10]
          Length = 324

 Score = 38.1 bits (87), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 4/120 (3%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GLN 61
           DE +H N GI +IN+I+ E P L T    +   T++  +  LE          G +  ++
Sbjct: 194 DEQIHANAGIYLINKIREEQPDLLTDSDIEDIYTLVDHSIELEAEILDWIFEMGEIDNVS 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQQ 118
             +   +M++  +    +IG++  +  + +   P  W  E +      +FF  R  +Y +
Sbjct: 254 KENLLNFMKYRVDDSLKKIGMQTRYNVSGDEYRPMVWFEEEVFANSMDDFFAKRPVDYTK 313


>gi|307171465|gb|EFN63309.1| Ribonucleoside-diphosphate reductase subunit M2 [Camponotus
           floridanus]
          Length = 343

 Score = 38.1 bits (87), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 7/82 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   I ++ P        ++ ++++ +A  +E  +  + +P   +G+N
Sbjct: 243 RDEGLHCDFACLMFKHI-VQKPSF------ERVKSIIMDAVEIEQEFLTQALPVQLIGMN 295

Query: 62  APSCEQYMQFIANRRCHQIGLE 83
                 Y++F+A+R    +G E
Sbjct: 296 CTLMCSYIEFVADRLFVALGFE 317


>gi|294669616|ref|ZP_06734683.1| hypothetical protein NEIELOOT_01517 [Neisseria elongata subsp.
          glycolytica ATCC 29315]
 gi|291308529|gb|EFE49772.1| hypothetical protein NEIELOOT_01517 [Neisseria elongata subsp.
          glycolytica ATCC 29315]
          Length = 81

 Score = 38.1 bits (87), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
           +GLN     QY+++I N R   +GL   F+  T+NP PW++
Sbjct: 1  MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWIN 42


>gi|229172094|ref|ZP_04299659.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           MM3]
 gi|228611437|gb|EEK68694.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           MM3]
          Length = 133

 Score = 38.1 bits (87), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 5/117 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DES+H  F   +  Q+ +E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 3   VKDESIHGVFVGILAQQLFVELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 60

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP        D K   +FF  +   Y
Sbjct: 61  -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTDTKN-HDFFSVKGNGY 115


>gi|167856024|ref|ZP_02478769.1| ribonucleotide-diphosphate reductase subunit alpha [Haemophilus
           parasuis 29755]
 gi|219871494|ref|YP_002475869.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           parasuis SH0165]
 gi|167852863|gb|EDS24132.1| ribonucleotide-diphosphate reductase subunit alpha [Haemophilus
           parasuis 29755]
 gi|219691698|gb|ACL32921.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           parasuis SH0165]
          Length = 325

 Score = 37.7 bits (86), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 12/125 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60
           ++E +H  FGI +   +  E+  L+T EF ++ +T+  +A   E         +G +  +
Sbjct: 194 KEEEIHGRFGIALYEILSDEHSELFTPEFFEELKTLSQQAFEAERGILDWIFEEGDLSFI 253

Query: 61  NAPSCEQYMQFIANRRCHQIGLEP-------LFKYTENPFPWMSEVIDLKKEKNFFETRV 113
           +  + E Y+    N     +GLEP       L K TE    W    I   KE +FF  R 
Sbjct: 254 SRKTVENYIMNRYNNSLSILGLEPPYDVDPELLKETE----WFDIEIISTKETDFFNKRS 309

Query: 114 TEYQQ 118
           T+Y +
Sbjct: 310 TDYSK 314


>gi|30984468|ref|NP_851900.1| ribonucleotide reductase subunit 2 [Macacine herpesvirus 1]
 gi|28804676|dbj|BAC58080.1| ribonucleotide reductase small subunit [Cercopithecine herpesvirus
           1]
 gi|30844282|gb|AAP41458.1| small subunit of ribonucleotide reductase [Macacine herpesvirus 1]
          Length = 338

 Score = 37.7 bits (86), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
           RDE++H            I N +L    K   ++   +  EA  +EI +     P     
Sbjct: 217 RDEAVH------TTASCYIYNNYLGGHRKPTAERVYRLFREAVDIEIGFIRSQAPANSRV 270

Query: 60  LNAPS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
           L+A +    E Y++F A+R    I ++PLF        +   ++  +K  NFFE R T Y
Sbjct: 271 LDAAALDAIENYVRFSADRLLVLIKMKPLFGAPAPAPSFPLSLMSTEKHTNFFECRSTAY 330


>gi|261496013|ref|ZP_05992423.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica serotype A2 str. OVINE]
 gi|261308263|gb|EEY09556.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica serotype A2 str. OVINE]
          Length = 325

 Score = 37.7 bits (86), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 12/125 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60
           ++E +H  FGI +   ++ E+  L+T EF +  +T+ ++A   E         +G +  +
Sbjct: 194 KEEEIHGKFGIALYEILRDEHSELFTPEFFEDLQTLANQAFEAERGILDWIFEEGDLSFI 253

Query: 61  NAPSCEQYMQFIANRRCHQIGLEP-------LFKYTENPFPWMSEVIDLKKEKNFFETRV 113
              + E Y++   N     +GLEP         K TE    W    I   KE +FF  R 
Sbjct: 254 TKATVENYIKNRYNNSLSILGLEPPHDIDPEFLKETE----WFDIEILSTKETDFFNKRS 309

Query: 114 TEYQQ 118
           T+Y +
Sbjct: 310 TDYSK 314


>gi|149369595|ref|ZP_01889447.1| ribonucleoside-diphosphate reductase, beta subunit [unidentified
           eubacterium SCB49]
 gi|149357022|gb|EDM45577.1| ribonucleoside-diphosphate reductase, beta subunit [unidentified
           eubacterium SCB49]
          Length = 424

 Score = 37.7 bits (86), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 4/121 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-L 60
           ++E +H +FGID+I  +K E+P  +T E+ +  + +  +A   E+        +G +  L
Sbjct: 293 KEEQIHGDFGIDLILILKDEHPEWFTPEYHENIKRLCLDAYEAEVDLVDWIFEEGELDFL 352

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQ 117
                 ++++   N+    IG+E +F   E       W  + I   K  +FF  R   Y 
Sbjct: 353 PKTVINEFLKNRFNKSLESIGVEKVFDVDEALVIQTEWFDDEIIGTKHGDFFVKRSVNYS 412

Query: 118 Q 118
           +
Sbjct: 413 K 413


>gi|46401830|ref|YP_006922.1| putative aerobic ribonucleoside diphosphate reductase, small
           subunit [Enterobacteria phage T5]
 gi|45775008|gb|AAS77140.1| putative aerobic ribonucleoside diphosphate reductase, small
           subunit [Enterobacteria phage T5]
 gi|51512032|gb|AAU05231.1| ribonucleotide reductase beta subunit [Enterobacteria phage T5]
 gi|59897231|gb|AAX12026.1| ribonucleoside diphosphate reductase I beta chain [Enterobacteria
           phage T5]
          Length = 381

 Score = 37.7 bits (86), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 4/104 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGL 60
           +DE+LH      +I  +  +       E   K+   L +    EI + H     +  +GL
Sbjct: 237 KDEALHTQMSKAIIQIMFQQFDKDLVDEAVAKAPAQLLKTLKTEIEWGHFIFKGRSLIGL 296

Query: 61  NAPSCEQYMQFIANRRCHQIGLE---PLFKYTENPFPWMSEVID 101
           NA   E+Y+ F+       IG+E    L   T+NP PW+   +D
Sbjct: 297 NAELLEEYLYFVGRNAFMHIGVEWPSHLPVITKNPIPWIMNWLD 340


>gi|229029125|ref|ZP_04185222.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH1271]
 gi|228732183|gb|EEL83068.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH1271]
          Length = 322

 Score = 37.7 bits (86), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 5/124 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  Q+  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQLFTELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                 +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y + 
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVKA 307

Query: 120 AELK 123
             ++
Sbjct: 308 TNVE 311


>gi|229095937|ref|ZP_04226913.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-29]
 gi|229114891|ref|ZP_04244304.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock1-3]
 gi|228668583|gb|EEL24012.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock1-3]
 gi|228687447|gb|EEL41349.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-29]
          Length = 322

 Score = 37.7 bits (86), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  Q+  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQLFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y
Sbjct: 250 -VDDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304


>gi|325955614|ref|YP_004239274.1| ribonucleotide reductase [Weeksella virosa DSM 16922]
 gi|323438232|gb|ADX68696.1| ribonucleotide reductase [Weeksella virosa DSM 16922]
          Length = 324

 Score = 37.4 bits (85), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 53/120 (44%), Gaps = 4/120 (3%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GLN 61
           DE +H N GI ++N+IK E P  +++E  Q+ + ++  +  +E         +G +  + 
Sbjct: 194 DEQIHANAGIYIVNKIKEEFPDFFSEETIQEIKNVVTHSIEVESQILDWIFEQGEIETIK 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                 +M++  +    +IG   ++  T     P  W  E +      +FF  R  +Y +
Sbjct: 254 KKDLLNFMKYRVDESMLKIGFGKIYNITAEQYQPMVWFEEEVFANSLDDFFAKRPVDYTK 313


>gi|229160405|ref|ZP_04288403.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           R309803]
 gi|228623129|gb|EEK79957.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           R309803]
          Length = 322

 Score = 37.4 bits (85), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  Q+  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQLFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGY 304


>gi|66391516|ref|YP_239041.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB43]
 gi|62288604|gb|AAX78587.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB43]
          Length = 391

 Score = 37.4 bits (85), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 5/102 (4%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKGF 57
           RDE+LH       I   Q+  ++P +     ++++++  +  E    E  +A      G 
Sbjct: 249 RDEALHQKGTQSKIRLWQMGKDDPEMAEIAYQYEEEATQIFLEVYEQEKEWAEHLFSIGD 308

Query: 58  V-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE 98
           V G+   S   Y++ + ++R   +GL+  FK + NP+PWM++
Sbjct: 309 VDGVTLKSTIAYIEHLTDQRMRAVGLQSPFKPSPNPYPWMNK 350


>gi|228957728|ref|ZP_04119472.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|228801971|gb|EEM48844.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus
           thuringiensis serovar pakistani str. T13001]
          Length = 133

 Score = 37.4 bits (85), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 3   VKDESIHGVFVGILAQQIFAELSTEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 60

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP        D K   +FF  +   Y
Sbjct: 61  -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTDTKN-HDFFSVKGNGY 115


>gi|196040733|ref|ZP_03108032.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           NVH0597-99]
 gi|206977638|ref|ZP_03238531.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           H3081.97]
 gi|217958931|ref|YP_002337479.1| ribonucleoside-diphosphate reductase, subunit beta [Bacillus cereus
           AH187]
 gi|222095088|ref|YP_002529148.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           Q1]
 gi|229138142|ref|ZP_04266740.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           BDRD-ST26]
 gi|229195652|ref|ZP_04322418.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           m1293]
 gi|196028523|gb|EDX67131.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           NVH0597-99]
 gi|206744211|gb|EDZ55625.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           H3081.97]
 gi|217064629|gb|ACJ78879.1| ribonucleoside-diphosphate reductase, subunit beta [Bacillus cereus
           AH187]
 gi|221239146|gb|ACM11856.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           Q1]
 gi|228587901|gb|EEK45953.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           m1293]
 gi|228645487|gb|EEL01721.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           BDRD-ST26]
          Length = 133

 Score = 37.4 bits (85), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 3   VKDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 60

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP        D K   +FF  +   Y
Sbjct: 61  -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTDTKN-HDFFSVKGNGY 115


>gi|216905873|ref|YP_002333501.1| ribonucleotide reductase subunit 2 [Equid herpesvirus 9]
 gi|216410027|dbj|BAH02445.1| small subunit of ribonucleotide reductase [Equid herpesvirus 9]
          Length = 321

 Score = 37.4 bits (85), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 16/122 (13%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT--MLHEATLLEIAYAHETMPKGFVG 59
           RDE++H            I N +L   E  +  R   +  EA  +E  +     P+    
Sbjct: 203 RDEAIHTR------ASCCIYNNYLGGFEKPEPKRIYELFSEAVNIECEFLLSHAPQNSHL 256

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKY----TENPFPWMSEVIDLKKEKNFFETRVTE 115
           L+      Y+++ A+R   +IGL PLF      T  P  +M+    ++K  NFFE R T 
Sbjct: 257 LDIGEIISYVRYSADRLLGEIGLSPLFNAPKPSTSFPLAFMT----VEKHTNFFERRSTA 312

Query: 116 YQ 117
           Y 
Sbjct: 313 YS 314


>gi|256422447|ref|YP_003123100.1| ribonucleotide reductase [Chitinophaga pinensis DSM 2588]
 gi|256037355|gb|ACU60899.1| ribonucleotide reductase [Chitinophaga pinensis DSM 2588]
          Length = 324

 Score = 37.4 bits (85), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 4/120 (3%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LN 61
           DE +H N GI +IN+I+ E P ++ +    +   ++ E+  +E         +G +  ++
Sbjct: 194 DEQIHANAGIYLINKIREEYPEMFDEATITRVSNLVKESIEVESNILDWIFSEGKIDTVS 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                 +M++ A+    +I L  LF  +     P  W  E +      +FF  R  +Y +
Sbjct: 254 KEHLVNFMKYRADDSLKKINLPALFNISTEDNKPMLWFEEEVFANSLDDFFAKRPVDYTK 313


>gi|242012701|ref|XP_002427066.1| Ribonucleoside-diphosphate reductase M2 subunit, putative
           [Pediculus humanus corporis]
 gi|212511324|gb|EEB14328.1| Ribonucleoside-diphosphate reductase M2 subunit, putative
           [Pediculus humanus corporis]
          Length = 304

 Score = 37.0 bits (84), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 18/84 (21%), Positives = 43/84 (51%), Gaps = 7/84 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   + ++ P       + +   ++ +A  +E  +  E +P   +G+N
Sbjct: 226 RDEGLHCDFACLMFKYV-VQKPT------EDEICDIIKDAVAIEQEFLTEALPVNLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPL 85
               ++Y++F+A+R   ++G + +
Sbjct: 279 CSLMKKYIEFVADRLLVELGCKKV 302


>gi|45478633|ref|NP_995489.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           biovar Microtus str. 91001]
 gi|52788092|ref|YP_093920.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis]
 gi|145597234|ref|YP_001154698.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Pestoides F]
 gi|162417832|ref|YP_001604568.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Angola]
 gi|229896974|ref|ZP_04512133.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Yersinia pestis Pestoides A]
 gi|45357286|gb|AAS58680.1| putative ribonucleoside-diphosphate reductase beta subunit
           [Yersinia pestis biovar Microtus str. 91001]
 gi|52538021|emb|CAG27446.1| putative ribonucleoside-diphosphate reductase beta subunit
           [Yersinia pestis]
 gi|145213002|gb|ABP42407.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Yersinia pestis Pestoides F]
 gi|162350804|gb|ABX84753.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           Angola]
 gi|229700010|gb|EEO88050.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Yersinia pestis Pestoides A]
          Length = 380

 Score = 37.0 bits (84), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 8/104 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIA-----YAHETMPKG 56
           RDE+LH      +I  ++     L  K    +  + +++ T++++A     +A      G
Sbjct: 239 RDEALHCEGTERMIRFMRTGREGLMWKMIAAEEESFIYQ-TMMDVAGQEMRWADYLFKDG 297

Query: 57  -FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSE 98
             +GLNA   + Y+++  N    ++GL PLF +  ++P  WM++
Sbjct: 298 SMIGLNADILKSYVKYRTNLAMRRLGLRPLFPEIKDDPLVWMNK 341


>gi|206968346|ref|ZP_03229302.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           AH1134]
 gi|228951834|ref|ZP_04113932.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|229069005|ref|ZP_04202298.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           F65185]
 gi|206737266|gb|EDZ54413.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           AH1134]
 gi|228714117|gb|EEL65999.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           F65185]
 gi|228807757|gb|EEM54278.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
          Length = 133

 Score = 37.0 bits (84), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 3   VKDESIHGVFVGILAQQIFAELSVEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 60

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP        D K   +FF  +   Y
Sbjct: 61  -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTDTKN-HDFFSVKGNGY 115


>gi|323512793|gb|ADX88247.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2006_D]
 gi|323513021|gb|ADX88474.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2006_C]
 gi|323513246|gb|ADX88698.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2006_B]
 gi|323513473|gb|ADX88924.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2006_A]
 gi|323513704|gb|ADX89154.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2005_A]
          Length = 450

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 8/108 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQ---KSRTMLHEATLLEIAYAHETMPKG- 56
           M DE++H      +IN +      +W K F+      + ++      E++++     +G 
Sbjct: 229 MIDETIHTRMDEAIINILL--GDEVWLKTFEDIKPDIKEIVDSVYKQELSWSEYIFSEGR 286

Query: 57  -FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDL 102
             VGLN    ++++Q+ +     ++G+E P      NP PWM   +D+
Sbjct: 287 SIVGLNTSLLKEWVQYKSQVVYKKLGIEQPFEDVINNPLPWMENWLDI 334


>gi|325171172|ref|YP_004251147.1| ribonucleoside diphosphate reductase, beta chain [Vibrio phage
           ICP1]
 gi|323512567|gb|ADX88022.1| ribonucleoside diphosphate reductase, beta chain [Vibrio phage
           ICP1]
 gi|323513935|gb|ADX89384.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2001_A]
 gi|323514163|gb|ADX89611.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2004_A]
          Length = 450

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 8/108 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQ---KSRTMLHEATLLEIAYAHETMPKG- 56
           M DE++H      +IN +      +W K F+      + ++      E++++     +G 
Sbjct: 229 MIDETIHTRMDEAIINILL--GDEVWLKTFEDIKPDIKEIVDSVYKQELSWSEYIFSEGR 286

Query: 57  -FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDL 102
             VGLN    ++++Q+ +     ++G+E P      NP PWM   +D+
Sbjct: 287 SIVGLNTSLLKEWVQYKSQVVYKKLGIEQPFEDVINNPLPWMENWLDI 334


>gi|417659|sp|P32209|RIR2_SWPVK RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|347472|gb|AAC37857.1| ribonucleotide reductase [Swinepox virus]
          Length = 274

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 7/82 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +   HL     ++   +++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFAC-------LMFKHLLHPPSKEVITSIIIDAVNIEKEFLTVAIPVDLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLE 83
                QY++F+A+R   ++G E
Sbjct: 248 CCLMSQYIEFVADRLLTELGCE 269


>gi|10834911|ref|NP_066872.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 3]
 gi|5102912|dbj|BAA78729.1| UL40 protein [Marek's disease virus serotype 2 MDV2]
 gi|5689312|dbj|BAA82936.1| UL40 product homolog [Marek's disease virus serotype 2 MDV2]
 gi|10800005|dbj|BAB16550.1| UL40 protein [Gallid herpesvirus 3]
          Length = 353

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/116 (21%), Positives = 46/116 (39%), Gaps = 5/116 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+     +       N     K    + + +  EA  LE A+     P+    L+
Sbjct: 236 RDEAIHVEASCCIFKNYIAGN-----KPSTARIQALFSEAVDLECAFLRAAAPRDSRLLD 290

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
             S   Y+++ A+R    + + P++        +   ++      NFFE R T Y 
Sbjct: 291 IGSICSYVRYSADRLLRMLDVPPIYGEPSPAADFPLSLMSASNNTNFFERRSTAYS 346


>gi|327409820|ref|YP_004347240.1| ribonucleoside-diphosphate reductase small chain [Lausannevirus]
 gi|326784994|gb|AEA07128.1| ribonucleoside-diphosphate reductase small chain [Lausannevirus]
          Length = 319

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 57/121 (47%), Gaps = 3/121 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+LH  F  +V+    ++   ++ +  Q++   +L  A      +   ++    V ++
Sbjct: 191 RDEALHKKFA-EVLYNFLVDELKVFERVSQERCHEILTSAIEAVTDFIKYSLRLDNVNID 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A     YM+   +     +  E ++   EN   +M  +I L+ + NFFE  +T+Y +G +
Sbjct: 250 ADRMLGYMKRAVDDLATGLKYEKVYN-AENTLDYML-LIGLENKGNFFEGVITDYSKGMD 307

Query: 122 L 122
           +
Sbjct: 308 M 308


>gi|59912|emb|CAA24930.1| unnamed protein product [Human herpesvirus 2]
          Length = 337

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT--MLHEATLLEIAYAHETMPKGFVG 59
           RDE++H            I N +L      + +R   +  EA  +EI +     P     
Sbjct: 216 RDEAVH------TTASCYIYNNYLGDHAKPEAARVYRLFREAVDIEIGFIRSQAPTDSSI 269

Query: 60  LNA---PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
           L+     + E Y++F A+R    I ++PL+        +   ++   K  NFFE R T Y
Sbjct: 270 LSPGALAAIENYVRFSADRLLGLIHMQPLYSAPAPDASFPLSLMSTDKHTNFFECRSTSY 329


>gi|326632980|ref|YP_004306569.1| putative aerobic ribonucleoside diphosphate reductase small subunit
           [Enterobacteria phage SPC35]
 gi|321272174|gb|ADW80066.1| putative aerobic ribonucleoside diphosphate reductase small subunit
           [Enterobacteria phage SPC35]
          Length = 381

 Score = 36.2 bits (82), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 4/104 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGL 60
           +DE+LH      +I  +  +       E   K+   L +    EI + H     +  +GL
Sbjct: 237 KDEALHTQMSKAIIQIMFQQFDKDLVNEAVAKAPAQLLKTLKTEIEWGHFIFKGRSLIGL 296

Query: 61  NAPSCEQYMQFIANRRCHQIGLE---PLFKYTENPFPWMSEVID 101
           NA   E+Y+ F+       IG++    L   T+NP PW+   +D
Sbjct: 297 NAELLEEYLYFVGRNAFMHIGVKWPSHLPVITKNPIPWIMNWLD 340


>gi|294661479|ref|YP_003579932.1| NrdB ribonucleotide reductase B subunit [Klebsiella phage KP15]
 gi|292660640|gb|ADE34888.1| NrdB ribonucleotide reductase B subunit [Klebsiella phage KP15]
          Length = 402

 Score = 36.2 bits (82), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 15/107 (14%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHLWTKEFQQKSRTMLHEATLL-------EIAYAHET 52
           RDE+LH       I   Q+  ++P     E  + SR +  EAT +       E  +A   
Sbjct: 260 RDEALHQKGTQSKIRLWQMGKDDP-----EMVEISRRLKKEATAIFLEVYEQEKEWAEHL 314

Query: 53  MPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE 98
              G V G++  S   Y++ + ++R   +GL+  F    NP+PWM++
Sbjct: 315 FSVGDVEGVSLKSTIAYIEHLTDQRMRAVGLDSPFTPIPNPYPWMNK 361


>gi|12084869|ref|NP_073334.1| ribonucleotide reductase subunit 2 [Meleagrid herpesvirus 1]
 gi|11095873|gb|AAG30080.1|AF282130_43 UL40 ribonucleotide reductase small subunit [Meleagrid herpesvirus
           1]
 gi|12025152|gb|AAG45778.1|AF291866_45 UL40 ribonucleotide reductase, small subunit [Meleagrid herpesvirus
           1]
          Length = 355

 Score = 36.2 bits (82), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/116 (21%), Positives = 48/116 (41%), Gaps = 5/116 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+     +      +N     K    +  T+  EA  LE  +     P+    +N
Sbjct: 238 RDEAIHVEASCCIF-----KNYLAGPKPTTARIHTLFKEAVRLECEFLRTAAPRTSNIIN 292

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
             +   Y+++ A+R    + + P++   + P  +   ++      NFFE R T Y 
Sbjct: 293 IDAICSYVRYSADRLLRALDILPIYDEPKPPADFPLVLMSAASNTNFFERRNTAYS 348


>gi|50313261|ref|YP_053065.1| ribonucleotide reductase subunit 2 [Equid herpesvirus 1]
 gi|132625|sp|P28847|RIR2_EHV1B RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|42795147|gb|AAS45904.1| small subunit of ribonucleotide reductase [Equid herpesvirus 1]
 gi|49617004|gb|AAT67277.1| ribonucleotide reductase RR2 [Equid herpesvirus 1]
          Length = 321

 Score = 36.2 bits (82), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 8/118 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT--MLHEATLLEIAYAHETMPKGFVG 59
           RDE++H            I N +L   E  +  R   +  EA  +E  +     P+    
Sbjct: 203 RDEAIHTR------ASCCIYNNYLGGFEKPEPKRIYELFSEAVNIECEFLLSHAPQYSHL 256

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
           L+  +   Y+++ A+R   +IGL PLF   +    +    + ++K  NFFE R T Y 
Sbjct: 257 LDIGAIISYVRYSADRLLGEIGLSPLFNAPKPSPSFPLAFMTVEKHTNFFERRSTAYS 314


>gi|159146681|gb|ABW90785.1| ribonucleotide reductase subunit 2 [Leporid herpesvirus 4]
          Length = 316

 Score = 35.4 bits (80), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 15/122 (12%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG---FV 58
           RDE++H      + N    +    + K   ++ + +   A  +EIA+     P       
Sbjct: 195 RDEAVHTTASCCLYNNYLGQ----YAKPPSERIKQLFSNAVEIEIAFIKAKAPANSRILD 250

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENP----FPWMSEVIDLKKEKNFFETRVT 114
           G    + E Y++F A+R    IG   LF   E P    FP    ++  +K  NFFE R T
Sbjct: 251 GAAIAAIESYVRFSADRLLKLIGEPALFD--EPPPNDGFPL--RLMSTEKHTNFFECRST 306

Query: 115 EY 116
            Y
Sbjct: 307 AY 308


>gi|703073|gb|AAA80557.1| ribonucleotide reductase small subunit [Gallid herpesvirus 2]
          Length = 354

 Score = 35.4 bits (80), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 24/116 (20%), Positives = 48/116 (41%), Gaps = 5/116 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+     +      +N     K    +  T+  EA  +E  +     P+    +N
Sbjct: 237 RDEAIHVEASCCIF-----KNYLAGPKPTTARIHTLFKEAVTVECEFLRTAAPRTSNIIN 291

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
             +   Y+++ A+R    + + P++   + P  +   ++      NFFE R T Y 
Sbjct: 292 IDAICSYVRYSADRLLRALDILPIYDEPKPPADFPLVLMSAASNTNFFERRNTAYS 347


>gi|326336655|ref|ZP_08202823.1| ribonucleoside-diphosphate reductase [Capnocytophaga sp. oral taxon
           338 str. F0234]
 gi|325691125|gb|EGD33096.1| ribonucleoside-diphosphate reductase [Capnocytophaga sp. oral taxon
           338 str. F0234]
          Length = 319

 Score = 35.4 bits (80), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 5/120 (4%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LN 61
           DE +H N GI ++  I  ENP   TK  ++++   + E  LLE         +G +    
Sbjct: 190 DEQVHANAGIYILKTIFEENPEFRTKA-KEEATQFIREYILLEDKMLDWIFEEGELDFFT 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                 YM++  +    Q+ L   F  T     P  W  E + + +  +FF  R T Y +
Sbjct: 249 KKDLANYMRYRLDDALTQLDLGKPFGITAEEAKPMLWFEEEVFVNELDDFFAKRPTAYTK 308


>gi|301750612|gb|ADK88940.1| ribonucleotide reductase subunit 2 [Leporid herpesvirus 4]
          Length = 316

 Score = 35.4 bits (80), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 15/122 (12%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG---FV 58
           RDE++H      + N    +    + K   ++ + +   A  +EIA+     P       
Sbjct: 195 RDEAVHTTASCCLYNNYLGQ----YAKPPSERIKQLFSNAVEIEIAFIKAKAPANSRILD 250

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENP----FPWMSEVIDLKKEKNFFETRVT 114
           G    + E Y++F A+R    IG   LF   E P    FP    ++  +K  NFFE R T
Sbjct: 251 GAAIAAIESYVRFSADRLLKLIGEPALFD--EPPPNDGFPL--RLMSTEKHTNFFECRST 306

Query: 115 EY 116
            Y
Sbjct: 307 AY 308


>gi|228473186|ref|ZP_04057941.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
           gingivalis ATCC 33624]
 gi|228275336|gb|EEK14128.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
           gingivalis ATCC 33624]
          Length = 319

 Score = 35.4 bits (80), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 5/120 (4%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGLN 61
           DE +H N GI ++  I  ENP   TK  ++++   + E  LLE         +G     +
Sbjct: 190 DEQVHANAGIYILKTIFDENPEFRTKA-KKEATEFIREYILLEDKMLDWIFEEGELEFFS 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                 YM++  +    Q+ L   F  T     P  W  E + + +  +FF  R T Y +
Sbjct: 249 KKDLANYMRYRLDDALTQLDLGKPFGITAEEAKPMLWFEEEVFVNELDDFFAKRPTAYTK 308


>gi|293411957|ref|ZP_06654682.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
 gi|309797907|ref|ZP_07692288.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 145-7]
 gi|220980068|emb|CAP72260.1| Ribonucleoside-diphosphate reductase subunit beta [Escherichia coli
           LF82]
 gi|291469512|gb|EFF12001.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
 gi|308118515|gb|EFO55777.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 145-7]
 gi|323934216|gb|EGB30640.1| ribonucleotide reductase [Escherichia coli E1520]
          Length = 380

 Score = 35.4 bits (80), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 8/104 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIA-----YAHETMPKG 56
           RDE+LH      +I  ++     L  KE       ++++ T+  +A     +A      G
Sbjct: 239 RDEALHCEGTERMIRFMRTGREGLLWKEIAADEENVIYD-TMKSVAEQEMNWADYLFKDG 297

Query: 57  -FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSE 98
             +GLNA   + Y+++  N   +++GL+ LF + T +P  WM++
Sbjct: 298 SMIGLNADILKTYVKYRTNLAMNRLGLKALFPEVTTDPLVWMNK 341


>gi|147800139|emb|CAN68817.1| hypothetical protein VITISV_036653 [Vitis vinifera]
          Length = 924

 Score = 35.0 bits (79), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)

Query: 89  TENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            ENPF WM E I L+   NFF+ R+ +YQ+ +
Sbjct: 755 VENPFDWM-EFISLQGNANFFQRRMGDYQKAS 785


>gi|256820037|ref|YP_003141316.1| ribonucleotide reductase [Capnocytophaga ochracea DSM 7271]
 gi|315225453|ref|ZP_07867266.1| ribonucleoside-diphosphate reductase [Capnocytophaga ochracea
           F0287]
 gi|256581620|gb|ACU92755.1| ribonucleotide reductase [Capnocytophaga ochracea DSM 7271]
 gi|314944551|gb|EFS96587.1| ribonucleoside-diphosphate reductase [Capnocytophaga ochracea
           F0287]
          Length = 319

 Score = 35.0 bits (79), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 5/120 (4%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LN 61
           DE LH N GI ++ +I  ENP +  K  ++ + T +     LE         +G +   +
Sbjct: 190 DEQLHANAGIYILKKIFEENPEMKAKA-EEDATTFIRSYITLEDKMLDWIFEQGELEFFS 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                 YM++  +    Q+GL   F  +     P  W  E +   +  +FF  R T Y +
Sbjct: 249 KKDLSNYMRYRLDDSLTQLGLGKPFGISGEEAKPMMWFEEEVFSNELDDFFAKRPTAYTK 308


>gi|45259565|dbj|BAD12265.1| p53-inducible ribonucleotide reductase small subunit 2 short form
           beta [Homo sapiens]
          Length = 66

 Score = 34.7 bits (78), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 18/32 (56%), Positives = 23/32 (71%), Gaps = 1/32 (3%)

Query: 89  TENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 20  AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 50


>gi|56694763|ref|YP_164483.1| ribonucleotide reductase subunit 2 [Cercopithecine herpesvirus 2]
 gi|52843315|gb|AAU88106.1| small subunit of ribonucleotide reductase [Cercopithecine
           herpesvirus 2]
          Length = 325

 Score = 34.3 bits (77), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 7/118 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N   +   H   K   ++   +  EA  +EI +     P     L+
Sbjct: 204 RDEAVHTTASCYIYNNY-LAGHH---KPEPERVYRLFREAVEIEIGFIRSQAPADSRILD 259

Query: 62  APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
           A +    E Y++F A+R    I ++PLF        +   ++  +K  NFFE R T Y
Sbjct: 260 AAALAAIENYVRFSADRLLALIRMKPLFGAPAPAPSFPLSLMSTEKHTNFFECRSTAY 317


>gi|326804582|ref|YP_004327453.1| Ribonucleotide-diphosphate reductase beta subunit [Salmonella phage
           Vi01]
 gi|301795232|emb|CBW37950.1| Ribonucleotide-diphosphate reductase beta subunit [Salmonella phage
           Vi01]
          Length = 367

 Score = 34.3 bits (77), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 4/106 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPH--LWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FV 58
           RDE  HL      +N++ + +P   +  +E + +   M  +    E  +A+     G  +
Sbjct: 232 RDEQDHLILTQTFLNRLPLLDPDFGIIREELRGEMTQMYVDVVNQEKEWANYLFKDGSML 291

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDLK 103
           GLNA    Q + ++A  R   IG   P     +NP PW++E +D K
Sbjct: 292 GLNANILHQMVDWLATHRMGAIGHPYPGQARKDNPVPWINEWLDNK 337


>gi|146301802|ref|YP_001196393.1| ribonucleotide reductase [Flavobacterium johnsoniae UW101]
 gi|146156220|gb|ABQ07074.1| ribonucleotide reductase [Flavobacterium johnsoniae UW101]
          Length = 324

 Score = 34.3 bits (77), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 4/120 (3%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GLN 61
           DE +H N GI +IN+I+ E P  + +E     R  + ++  +E         +G +  + 
Sbjct: 194 DEQIHANGGIYIINKIREEFPDYFDEETLALVRETVKDSIAVESDILDWIFEEGEIESIK 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQQ 118
                 +M+F  +    QI +  +F      +    W  E +      +FF  R  EY +
Sbjct: 254 KGDLVNFMKFRIDESLKQINIPVIFDVKVEDYKALAWFEEEVFANSLDDFFAKRPVEYTK 313


>gi|161622513|ref|YP_001595352.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           JS98]
 gi|160213819|gb|ABX11158.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           JS98]
          Length = 379

 Score = 34.3 bits (77), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 7/107 (6%)

Query: 2   RDESLHLNFGIDVINQIKI-ENPHLWTK---EFQQKSRTMLHEATLLEIAYAHETMPKGF 57
           RDE LHL     +I Q+++  +   W K   E +Q++  +  E    E  +A      G 
Sbjct: 236 RDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQEKEWAAHLFKDGT 295

Query: 58  V-GLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101
             GLN  +   ++ ++   R  Q GL  P+    T +P+PW+ E ++
Sbjct: 296 CPGLNTQNMGAFVDYLTVSRMKQCGLPCPITDAPTRHPYPWIREYLN 342


>gi|238695377|ref|YP_002922570.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage
           JS10]
 gi|220029513|gb|ACL78447.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage
           JS10]
          Length = 379

 Score = 34.3 bits (77), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 7/107 (6%)

Query: 2   RDESLHLNFGIDVINQIKI-ENPHLWTK---EFQQKSRTMLHEATLLEIAYAHETMPKGF 57
           RDE LHL     +I Q+++  +   W K   E +Q++  +  E    E  +A      G 
Sbjct: 236 RDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQEKEWAGHLFKDGT 295

Query: 58  V-GLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101
             GLN  +   ++ ++   R  Q GL  P+    T +P+PW+ E ++
Sbjct: 296 CPGLNTQNMGAFVDYLTVSRMKQCGLPCPITDAPTRHPYPWIREYLN 342


>gi|159040974|ref|YP_001540226.1| Alpha-L-fucosidase [Caldivirga maquilingensis IC-167]
 gi|157919809|gb|ABW01236.1| Alpha-L-fucosidase [Caldivirga maquilingensis IC-167]
          Length = 484

 Score = 34.3 bits (77), Expect = 6.6,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 10/97 (10%)

Query: 20  IENPH----LWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV---GLNAPSCEQYMQFI 72
           I+ PH    LW +  +      L++  L  I    +  P+ F     +  PS E Y++F 
Sbjct: 193 IKEPHEQGKLWPQPVEPPGEAFLNDWLLRAIELVDKYRPQLFYFDWWIEYPSFEPYLRFF 252

Query: 73  AN---RRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK 106
                 R +Q GLE    Y  N  P  + V+D+++ K
Sbjct: 253 TAYYYNRAYQWGLEVAINYKHNAMPSWAGVLDVERGK 289


>gi|257464834|ref|ZP_05629205.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           minor 202]
 gi|257450494|gb|EEV24537.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           minor 202]
          Length = 326

 Score = 33.9 bits (76), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 16/127 (12%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           ++E +H  FGI +   ++ E+  L+T  F ++ +T+ ++A   E         +G   L+
Sbjct: 195 KEEEIHGKFGIALYEILRDEHSELFTPAFFEELQTLANQAFEAEKGILDWIFEEG--DLS 252

Query: 62  APSCEQYMQFIANRRCHQI---GLEP-------LFKYTENPFPWMSEVIDLKKEKNFFET 111
             S E  + +I +R  + +   GLEP       L K T     W    I   KE +FF  
Sbjct: 253 FISKETVLNYIKSRYNNSLVTLGLEPPHNINPELLKET----AWFDIEILSTKETDFFNK 308

Query: 112 RVTEYQQ 118
           R T+Y +
Sbjct: 309 RSTDYSK 315


>gi|299779174|ref|YP_003734368.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           IME08]
 gi|298105903|gb|ADI55547.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           IME08]
          Length = 389

 Score = 33.9 bits (76), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 7/107 (6%)

Query: 2   RDESLHLNFGIDVINQIKI-ENPHLWTK---EFQQKSRTMLHEATLLEIAYAHETMPKGF 57
           RDE LHL     +I Q+++  +   W K   E +Q++  +  E    E  +A      G 
Sbjct: 246 RDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQEKEWATHLFKDGT 305

Query: 58  V-GLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101
             GLN  +   ++ ++   R  Q GL  P+    T +P+PW+ E ++
Sbjct: 306 CPGLNTQNMGAFVDYLTVSRMKQCGLPCPITDAPTRHPYPWIREYLN 352


>gi|109290088|ref|YP_656337.1| hypothetical protein PHG25ORF102c [Aeromonas phage 25]
 gi|104345761|gb|ABF72661.1| hypothetical protein PHG25ORF102c [Aeromonas phage 25]
          Length = 332

 Score = 33.9 bits (76), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 6/80 (7%)

Query: 39  HEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP-WMS 97
           HE+ ++++ +A     +   G+ A     +++   N     +G EP+F+   NP   W  
Sbjct: 246 HESGIIDLVFA-----EPIDGITADELRVFVKSRINLCLENLGYEPIFEIENNPIADWFY 300

Query: 98  EVIDLKKEKNFFETRVTEYQ 117
             I+ KK  +FF    +EY 
Sbjct: 301 RTINAKKFHDFFTGSGSEYN 320


>gi|37651592|ref|NP_932466.1| hypothetical protein 44RRORF111c [Aeromonas phage 44RR2.8t]
 gi|66391913|ref|YP_238838.1| hypothetical protein PHG31p109 [Aeromonas phage 31]
 gi|34732892|gb|AAQ81430.1| hypothetical protein 44RRORF111c [Aeromonas phage 44RR2.8t]
 gi|62114750|gb|AAX63598.1| hypothetical protein PHG31p109 [Aeromonas phage 31]
          Length = 323

 Score = 33.9 bits (76), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 10/88 (11%)

Query: 39  HEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP-WMS 97
           HE+ ++++ +A     +   G+ A     +++   N     +G +P+F+   NP   W  
Sbjct: 237 HESGIIDLVFA-----EPIDGITADELRIFVKSRINLCLENLGYDPIFEIESNPIASWFY 291

Query: 98  EVIDLKKEKNFFETRVTEYQQGAELKWD 125
             I+ KK  +FF    +EY     + WD
Sbjct: 292 RTINAKKFHDFFTGSGSEYN----INWD 315


>gi|300776394|ref|ZP_07086252.1| ribonucleoside-diphosphate reductase [Chryseobacterium gleum ATCC
           35910]
 gi|300501904|gb|EFK33044.1| ribonucleoside-diphosphate reductase [Chryseobacterium gleum ATCC
           35910]
          Length = 371

 Score = 33.9 bits (76), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 4/120 (3%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GLN 61
           DE +H N GI +IN+I+ E P L T    +   T++ E+   E          G +  ++
Sbjct: 241 DEQIHANAGIYLINKIREEQPDLLTDSDIEDIYTLVDESIAREGDILSWIFELGEIDNVS 300

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                 +M++  +    +I ++  +  T     P  W  E +      +FF  R  +Y +
Sbjct: 301 KEDLLNFMKYRVDDSLKKINMKTRYNITPEQYRPMVWFEEEVFANSLDDFFAKRPVDYTK 360


>gi|310722361|ref|YP_003969185.1| hypothetical protein phiAS4_ORF0167 [Aeromonas phage phiAS4]
 gi|306021204|gb|ADM79739.1| hypothetical protein phiAS4_ORF0167 [Aeromonas phage phiAS4]
          Length = 332

 Score = 33.5 bits (75), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 6/80 (7%)

Query: 39  HEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP-WMS 97
           HE+ ++++ +A         G+ A     +++   N     +G EP+F+   NP   W  
Sbjct: 246 HESGIIDLVFAEPID-----GITADELRVFVKSRINLCLENLGYEPIFEIENNPIADWFY 300

Query: 98  EVIDLKKEKNFFETRVTEYQ 117
             I+ KK  +FF    +EY 
Sbjct: 301 RTINAKKFHDFFTGSGSEYN 320


>gi|240950330|ref|ZP_04754600.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           minor NM305]
 gi|240295141|gb|EER45960.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           minor NM305]
          Length = 326

 Score = 33.5 bits (75), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 16/127 (12%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           ++E +H  FGI +   ++ E+  L+T  F ++ +T+  +A   E         +G   L+
Sbjct: 195 KEEEIHGKFGIALYEILRDEHSELFTPAFFEELQTLASQAFEAEKGILDWIFEEG--DLS 252

Query: 62  APSCEQYMQFIANRRCHQI---GLEP-------LFKYTENPFPWMSEVIDLKKEKNFFET 111
             S E  + +I +R  + +   GLEP       L K T     W    I   KE +FF  
Sbjct: 253 FISKETVLNYIKSRYNNSLVTLGLEPPHDINPELLKET----AWFDIEILSTKETDFFNK 308

Query: 112 RVTEYQQ 118
           R T+Y +
Sbjct: 309 RSTDYSK 315


>gi|83722609|ref|YP_443887.1| ribonucleotide reductase subunit 2 [Papiine herpesvirus 2]
 gi|75905762|gb|ABA29294.1| UL40 [Papiine herpesvirus 2]
          Length = 339

 Score = 33.5 bits (75), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 7/118 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N     +     K   ++   +  EA  +EI +     P     L+
Sbjct: 218 RDEAVHTTASCYIYNNYLAGH----RKPEPERVYRLFREAVEIEIGFIRSQAPADSRILD 273

Query: 62  APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
           A +    E Y++F A+R    I ++PLF        +   ++  +K  NFFE R T Y
Sbjct: 274 AAALAAIENYVRFSADRLLALIEMKPLFGAPAPAPSFPLNLMSTEKHTNFFERRSTAY 331


>gi|125745092|ref|YP_001033969.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 2]
 gi|327488446|sp|Q77MS0|RIR2_GAHVM RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|7673151|gb|AAF66775.1|AF147806_39 ribonucleotide reductase small subunit [Gallid herpesvirus 2]
 gi|10180745|gb|AAG14233.1|AF243438_48 UL40 ribonucleotide reductase small subunit-like protein [Gallid
           herpesvirus 2]
 gi|104304005|gb|ABF72280.1| HSV-1 UL40-like protein [Gallid herpesvirus 2]
 gi|148806369|gb|ABR13125.1| UL40 [Gallid herpesvirus 2]
 gi|194346388|gb|ACF49570.1| UL40 [synthetic construct]
 gi|194750382|gb|ACF94859.1| UL40 [Gallid herpesvirus 2]
 gi|237626230|gb|ACR02753.1| UL40 [synthetic construct]
 gi|237626404|gb|ACR02926.1| UL40 [synthetic construct]
          Length = 343

 Score = 33.5 bits (75), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 23/116 (19%), Positives = 50/116 (43%), Gaps = 5/116 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+     +      +N  +  K    + + +  EA  +E A+     P+    L+
Sbjct: 226 RDEAIHVEASCCIF-----KNYLMGPKPSIGRVQELFKEAVQIECAFLRTAAPRNSQLLD 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
             +   Y+++ A+R   ++ + P++   +    +   ++      NFFE R T Y 
Sbjct: 281 VEAICSYVRYSADRLLKELDMPPIYNEPKPTADFPLALMTASNNTNFFERRNTAYS 336


Searching..................................................done


Results from round 2




>gi|260220050|emb|CBA27200.1| Ribonucleoside-diphosphate reductase subunit alpha [Curvibacter
            putative symbiont of Hydra magnipapillata]
          Length = 1306

 Score =  216 bits (550), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 78/125 (62%), Positives = 98/125 (78%)

Query: 1    MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
            +RDES+H NFGID+INQ+K+ENPHLWT EF+ + + +  +A  LE  YA +TMP+G +G+
Sbjct: 1182 LRDESMHCNFGIDLINQLKLENPHLWTPEFKAEIKALFEKAVELEYRYAEDTMPRGVLGM 1241

Query: 61   NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            NA   + Y+++IANRR  QIGLEPLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 1242 NASMFKGYLRYIANRRATQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 1301

Query: 121  ELKWD 125
             L WD
Sbjct: 1302 ALSWD 1306


>gi|288941383|ref|YP_003443623.1| Ribonucleoside-diphosphate reductase [Allochromatium vinosum DSM
           180]
 gi|288896755|gb|ADC62591.1| Ribonucleoside-diphosphate reductase [Allochromatium vinosum DSM
           180]
          Length = 458

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 86/125 (68%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLWT EF+Q+   M+ EA  LE  YAH+TMP+G +GL
Sbjct: 334 LRDESMHMNFGIDVINQIKIENPHLWTPEFRQELVGMIREAVELEARYAHDTMPRGVLGL 393

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y+ FIANRRC QIGL   +    NPFPWMSEV+DLKKEKNFFETRVTEYQ G 
Sbjct: 394 NAQMFEDYLHFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 453

Query: 121 ELKWD 125
            L WD
Sbjct: 454 ALNWD 458


>gi|187479453|ref|YP_787478.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella avium
           197N]
 gi|115424040|emb|CAJ50593.1| ribonucleoside-diphosphate reductase beta chain [Bordetella avium
           197N]
          Length = 394

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK+ENPHLWT EF+++ R +  +A  LE AYA +TMP+G +GL
Sbjct: 270 LRDESMHCNFGIDLINTIKLENPHLWTPEFREEIRELFRKAVELEYAYAEDTMPRGVLGL 329

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRRC QIG+EPL+   ENPFPWM+E+IDLKKE+NFFETRV EYQ G 
Sbjct: 330 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 389

Query: 121 ELKWD 125
            L W+
Sbjct: 390 TLSWE 394


>gi|238026167|ref|YP_002910398.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           glumae BGR1]
 gi|237875361|gb|ACR27694.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           glumae BGR1]
          Length = 407

 Score =  207 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 283 LRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIRELFKRAVELEYRYAEDTMPRGVLGL 342

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FIANRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 343 NAAMFKSYLRFIANRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 402

Query: 121 ELKWD 125
            L W+
Sbjct: 403 ALSWE 407


>gi|209521089|ref|ZP_03269819.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. H160]
 gi|209498472|gb|EDZ98597.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. H160]
          Length = 411

 Score =  207 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 287 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRAIFQQAVELEYRYAEDTMPRGVLGL 346

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 347 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 406

Query: 121 ELKWD 125
            L W+
Sbjct: 407 ALSWE 411


>gi|295677726|ref|YP_003606250.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1002]
 gi|295437569|gb|ADG16739.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1002]
          Length = 411

 Score =  207 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 287 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRAIFQQAVELEYRYAEDTMPRGVLGL 346

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 347 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 406

Query: 121 ELKWD 125
            L W+
Sbjct: 407 ALSWE 411


>gi|313200886|ref|YP_004039544.1| ribonucleoside-diphosphate reductase [Methylovorus sp. MP688]
 gi|312440202|gb|ADQ84308.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. MP688]
          Length = 381

 Score =  207 bits (528), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 75/125 (60%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN +K+ENPHLWT EF+++ + ++ +A  LE  YA +TMP+G +GL
Sbjct: 257 LRDESMHCNFGIDLINTLKLENPHLWTPEFREEIKRLMQQAVELEYRYAEDTMPRGVLGL 316

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   ++Y++FIANRR  QIG++ L+    NPFPWMSE++DLKKEKNFFETRVTEYQ G 
Sbjct: 317 NAAMFKEYLRFIANRRMQQIGIDALYPGASNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 376

Query: 121 ELKWD 125
            L WD
Sbjct: 377 ALSWD 381


>gi|254253304|ref|ZP_04946622.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
           dolosa AUO158]
 gi|124895913|gb|EAY69793.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
           dolosa AUO158]
          Length = 403

 Score =  207 bits (528), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|33593916|ref|NP_881560.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           pertussis Tohama I]
 gi|33598411|ref|NP_886054.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           parapertussis 12822]
 gi|33603351|ref|NP_890911.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           bronchiseptica RB50]
 gi|33563990|emb|CAE43255.1| ribonucleoside-diphosphate reductase beta chain [Bordetella
           pertussis Tohama I]
 gi|33574540|emb|CAE39187.1| ribonucleoside-diphosphate reductase beta chain [Bordetella
           parapertussis]
 gi|33577475|emb|CAE34740.1| ribonucleoside-diphosphate reductase beta chain [Bordetella
           bronchiseptica RB50]
 gi|332383335|gb|AEE68182.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           pertussis CS]
          Length = 398

 Score =  207 bits (527), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 81/125 (64%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK+ENPHLWT EF+++ R +  +A  LE AYA +TMP+G +GL
Sbjct: 274 LRDESMHCNFGIDLINTIKLENPHLWTPEFREEIRELFRKAVELEYAYAEDTMPRGVLGL 333

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRRC QIG+EPLF   ENPFPWM+E+IDLKKE+NFFETRV EYQ G 
Sbjct: 334 NAPMFKSYLRFIANRRCQQIGIEPLFPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 393

Query: 121 ELKWD 125
            L W+
Sbjct: 394 TLSWE 398


>gi|161525957|ref|YP_001580969.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           multivorans ATCC 17616]
 gi|160343386|gb|ABX16472.1| Ribonucleoside-diphosphate reductase [Burkholderia multivorans ATCC
           17616]
          Length = 396

 Score =  207 bits (527), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 272 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 331

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 332 NASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 391

Query: 121 ELKWD 125
            L W+
Sbjct: 392 ALSWE 396


>gi|253998799|ref|YP_003050862.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. SIP3-4]
 gi|253985478|gb|ACT50335.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. SIP3-4]
          Length = 383

 Score =  207 bits (527), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 75/125 (60%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN +K+ENPHLWT EF+++ + ++ +A  LE  YA +TMP+G +GL
Sbjct: 259 LRDESMHCNFGIDLINTLKLENPHLWTPEFREEIKRLMQQAVELEYRYAEDTMPRGVLGL 318

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   ++Y++FIANRR  QIG++ L+    NPFPWMSE++DLKKEKNFFETRVTEYQ G 
Sbjct: 319 NAAMFKEYLRFIANRRMQQIGIDALYPGASNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 378

Query: 121 ELKWD 125
            L WD
Sbjct: 379 ALSWD 383


>gi|170699976|ref|ZP_02891003.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria
           IOP40-10]
 gi|170135124|gb|EDT03425.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria
           IOP40-10]
          Length = 403

 Score =  207 bits (527), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|78065156|ref|YP_367925.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia sp.
           383]
 gi|77965901|gb|ABB07281.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. 383]
          Length = 403

 Score =  207 bits (527), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|115350552|ref|YP_772391.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           ambifaria AMMD]
 gi|172059584|ref|YP_001807236.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           ambifaria MC40-6]
 gi|115280540|gb|ABI86057.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria AMMD]
 gi|171992101|gb|ACB63020.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria
           MC40-6]
          Length = 403

 Score =  207 bits (527), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|171318520|ref|ZP_02907672.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria MEX-5]
 gi|171096306|gb|EDT41212.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria MEX-5]
          Length = 403

 Score =  206 bits (526), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|163854887|ref|YP_001629185.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           petrii DSM 12804]
 gi|163258615|emb|CAP40914.1| ribonucleoside-diphosphate reductase beta chain [Bordetella petrii]
          Length = 396

 Score =  206 bits (526), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK+ENPHLWT EF+++ R +  +A  LE AYA +TMP+G +GL
Sbjct: 272 LRDESMHCNFGIDLINTIKLENPHLWTPEFREEIRGLFQKAVELEYAYAEDTMPRGVLGL 331

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRRC QIG+EPL+   ENPFPWM+E+IDLKKE+NFFETRV EYQ G 
Sbjct: 332 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 391

Query: 121 ELKWD 125
            L W+
Sbjct: 392 TLSWE 396


>gi|91785256|ref|YP_560462.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           xenovorans LB400]
 gi|91689210|gb|ABE32410.1| Ribonucleoside-diphosphate reductase [Burkholderia xenovorans
           LB400]
          Length = 411

 Score =  206 bits (526), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 287 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 346

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 347 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 406

Query: 121 ELKWD 125
            L W+
Sbjct: 407 ALTWE 411


>gi|207744360|ref|YP_002260752.1| transmembrane ribonucleoside reductase (small chain) protein
           [Ralstonia solanacearum IPO1609]
 gi|206595765|emb|CAQ62692.1| transmembrane ribonucleoside reductase (small chain) protein
           [Ralstonia solanacearum IPO1609]
          Length = 410

 Score =  206 bits (526), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 83/125 (66%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 286 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 345

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGLEPLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 346 NAPMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 405

Query: 121 ELKWD 125
            L WD
Sbjct: 406 ALSWD 410


>gi|83746810|ref|ZP_00943858.1| Ribonucleoside-diphosphate reductase beta chain [Ralstonia
           solanacearum UW551]
 gi|207721465|ref|YP_002251905.1| transmembrane ribonucleoside reductase (small chain) protein
           [Ralstonia solanacearum MolK2]
 gi|83726579|gb|EAP73709.1| Ribonucleoside-diphosphate reductase beta chain [Ralstonia
           solanacearum UW551]
 gi|206586625|emb|CAQ17211.1| transmembrane ribonucleoside reductase (small chain) protein
           [Ralstonia solanacearum MolK2]
          Length = 402

 Score =  206 bits (526), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 83/125 (66%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGLEPLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 338 NAPMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397

Query: 121 ELKWD 125
            L WD
Sbjct: 398 ALSWD 402


>gi|300703002|ref|YP_003744604.1| ribonucleoside diphosphate reductase 1 subunit beta, ferritin-like
           [Ralstonia solanacearum CFBP2957]
 gi|299070665|emb|CBJ41960.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Ralstonia solanacearum CFBP2957]
          Length = 402

 Score =  206 bits (526), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 83/125 (66%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGLEPLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 338 NAPMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397

Query: 121 ELKWD 125
            L WD
Sbjct: 398 ALSWD 402


>gi|307731037|ref|YP_003908261.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1003]
 gi|307585572|gb|ADN58970.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1003]
          Length = 411

 Score =  206 bits (526), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 287 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 346

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 347 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 406

Query: 121 ELKWD 125
            L W+
Sbjct: 407 ALTWE 411


>gi|296160506|ref|ZP_06843322.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. Ch1-1]
 gi|295889255|gb|EFG69057.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. Ch1-1]
          Length = 415

 Score =  206 bits (526), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 291 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 351 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L W+
Sbjct: 411 ALTWE 415


>gi|170731918|ref|YP_001763865.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           cenocepacia MC0-3]
 gi|169815160|gb|ACA89743.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia
           MC0-3]
          Length = 403

 Score =  206 bits (525), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|224825450|ref|ZP_03698555.1| Ribonucleoside-diphosphate reductase [Lutiella nitroferrum 2002]
 gi|224602371|gb|EEG08549.1| Ribonucleoside-diphosphate reductase [Lutiella nitroferrum 2002]
          Length = 360

 Score =  206 bits (525), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN +K ENP LWT+EF+ +   +   A  LE AYA +TMP+G +GL
Sbjct: 236 LRDESMHCNFGIDLINTVKQENPQLWTEEFKAEITGLFKHAVELEYAYAEDTMPRGVLGL 295

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   ++Y++FIANRR  QIGLEP+F    NPFPWMSE+IDLKKEKNFFETRVTEYQ G 
Sbjct: 296 NAAMFKEYLRFIANRRMQQIGLEPMFPGVTNPFPWMSEMIDLKKEKNFFETRVTEYQTGG 355

Query: 121 ELKWD 125
            L WD
Sbjct: 356 ALSWD 360


>gi|34497739|ref|NP_901954.1| ribonucleotide-diphosphate reductase subunit beta [Chromobacterium
           violaceum ATCC 12472]
 gi|34103595|gb|AAQ59956.1| ribonucleoside-diphosphate reductase system [Chromobacterium
           violaceum ATCC 12472]
          Length = 360

 Score =  206 bits (525), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK+ENP LWT  F+ +   +  +A  LE AYA +TMP+G +GL
Sbjct: 236 LRDESMHCNFGIDLINTIKLENPLLWTDSFKAEIVDLFKQAVELEYAYAEDTMPRGVLGL 295

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   ++Y++FIANRR  QIGL+PLF    NPFPWMSE+IDLKKEKNFFETRVTEYQ G 
Sbjct: 296 NASMFKEYLRFIANRRMQQIGLDPLFPGVNNPFPWMSEMIDLKKEKNFFETRVTEYQTGG 355

Query: 121 ELKWD 125
            L WD
Sbjct: 356 ALSWD 360


>gi|332530699|ref|ZP_08406630.1| ribonucleotide-diphosphate reductase subunit beta [Hylemonella
           gracilis ATCC 19624]
 gi|332039867|gb|EGI76262.1| ribonucleotide-diphosphate reductase subunit beta [Hylemonella
           gracilis ATCC 19624]
          Length = 399

 Score =  206 bits (525), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 78/125 (62%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA +TMP+G +G+
Sbjct: 275 LRDESMHCNFGIDLINQIKLENPQLWTPEFKAEIRGLFEKAVELEYRYAEDTMPRGVLGM 334

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 335 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 394

Query: 121 ELKWD 125
            L WD
Sbjct: 395 ALSWD 399


>gi|134294683|ref|YP_001118418.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           vietnamiensis G4]
 gi|134137840|gb|ABO53583.1| Ribonucleoside-diphosphate reductase [Burkholderia vietnamiensis
           G4]
          Length = 403

 Score =  206 bits (525), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|220935777|ref|YP_002514676.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219997087|gb|ACL73689.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 408

 Score =  206 bits (525), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 83/125 (66%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIK+ENPHLWT  F+++ RTM+ +A  LE  YA +TMP+G +G+
Sbjct: 284 LRDESMHMNFGIDVINQIKVENPHLWTAAFKEEMRTMIRDAVELEAQYARDTMPRGVLGM 343

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRRC QIGL  ++   ENPFPWMSEV+DLKKEKNFFETRVTEYQ G 
Sbjct: 344 NAAMFEEYLHFIANRRCAQIGLAEIYPGAENPFPWMSEVLDLKKEKNFFETRVTEYQTGG 403

Query: 121 ELKWD 125
            L WD
Sbjct: 404 ALSWD 408


>gi|189349324|ref|YP_001944952.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           multivorans ATCC 17616]
 gi|221213238|ref|ZP_03586213.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD1]
 gi|189333346|dbj|BAG42416.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           multivorans ATCC 17616]
 gi|221166690|gb|EED99161.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD1]
          Length = 403

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|330815478|ref|YP_004359183.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           gladioli BSR3]
 gi|327367871|gb|AEA59227.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           gladioli BSR3]
          Length = 407

 Score =  206 bits (524), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 283 LRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIRELFKHAVELEYRYAEDTMPRGVLGL 342

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FIANRRC QIGL+ L+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 343 NASMFKSYLRFIANRRCQQIGLDALYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 402

Query: 121 ELKWD 125
            L W+
Sbjct: 403 ALSWE 407


>gi|187925407|ref|YP_001897049.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           phytofirmans PsJN]
 gi|187716601|gb|ACD17825.1| Ribonucleoside-diphosphate reductase [Burkholderia phytofirmans
           PsJN]
          Length = 415

 Score =  206 bits (524), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 291 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 351 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L W+
Sbjct: 411 ALTWE 415


>gi|107021673|ref|YP_620000.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           cenocepacia AU 1054]
 gi|116688619|ref|YP_834242.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           cenocepacia HI2424]
 gi|105891862|gb|ABF75027.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia AU
           1054]
 gi|116646708|gb|ABK07349.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia
           HI2424]
          Length = 382

 Score =  206 bits (524), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 258 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 317

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 318 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 377

Query: 121 ELKWD 125
            L W+
Sbjct: 378 ALSWE 382


>gi|186477386|ref|YP_001858856.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           phymatum STM815]
 gi|184193845|gb|ACC71810.1| Ribonucleoside-diphosphate reductase [Burkholderia phymatum STM815]
          Length = 407

 Score =  206 bits (524), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 283 LRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIREIFKHAVDLEYRYAEDTMPRGVLGL 342

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIG++PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 343 NASMFKSYLRFICNRRCQQIGIDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 402

Query: 121 ELKWD 125
            L W+
Sbjct: 403 ALSWE 407


>gi|206561765|ref|YP_002232530.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           cenocepacia J2315]
 gi|254246390|ref|ZP_04939711.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
           cenocepacia PC184]
 gi|124871166|gb|EAY62882.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
           cenocepacia PC184]
 gi|198037807|emb|CAR53751.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           cenocepacia J2315]
          Length = 403

 Score =  205 bits (523), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|325519933|gb|EGC99191.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia sp.
           TJI49]
          Length = 403

 Score =  205 bits (523), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|332286774|ref|YP_004418685.1| ribonucleoside-diphosphate reductase beta chain [Pusillimonas sp.
           T7-7]
 gi|330430727|gb|AEC22061.1| ribonucleoside-diphosphate reductase beta chain [Pusillimonas sp.
           T7-7]
          Length = 387

 Score =  205 bits (523), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 81/125 (64%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK+ENPHLWT EF+++ R +  +A  LE AYA +TMP+G +GL
Sbjct: 263 LRDESMHCNFGIDLINTIKLENPHLWTAEFREELRELFKKAVDLEYAYAEDTMPRGVLGL 322

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FIANRRC QIGLEPLF   ENPFPWM+E+IDLKKE+NFFETRV EYQ G 
Sbjct: 323 NASMFKSYLRFIANRRCQQIGLEPLFGQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 382

Query: 121 ELKWD 125
            L W+
Sbjct: 383 ALSWE 387


>gi|92112799|ref|YP_572727.1| ribonucleotide-diphosphate reductase subunit beta [Chromohalobacter
           salexigens DSM 3043]
 gi|91795889|gb|ABE58028.1| Ribonucleoside-diphosphate reductase [Chromohalobacter salexigens
           DSM 3043]
          Length = 420

 Score =  205 bits (523), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 82/125 (65%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFG+D+INQIKIENPHLWT EFQ +   M+ E T LEIAYA ++MP+G +G+
Sbjct: 296 LRDESMHLNFGVDMINQIKIENPHLWTPEFQDEVTQMIIEGTELEIAYARDSMPRGVLGM 355

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FI NRR  QIGL+  +   ENPFPWMSE+IDL+KEKNFFETRVTEYQ G 
Sbjct: 356 NAAIMEEYLHFICNRRLAQIGLKEQYPGAENPFPWMSEIIDLRKEKNFFETRVTEYQVGG 415

Query: 121 ELKWD 125
            L WD
Sbjct: 416 ALSWD 420


>gi|121595925|ref|YP_987821.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax sp.
           JS42]
 gi|222112113|ref|YP_002554377.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax
           ebreus TPSY]
 gi|120608005|gb|ABM43745.1| Ribonucleoside-diphosphate reductase [Acidovorax sp. JS42]
 gi|221731557|gb|ACM34377.1| Ribonucleoside-diphosphate reductase [Acidovorax ebreus TPSY]
          Length = 396

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 77/125 (61%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENPHLWT EF+ + + +  +A  LE  YA +TMP+G +G+
Sbjct: 272 LRDESMHCNFGIDLINQLKLENPHLWTAEFKDEIKALFIKAVELEYRYAEDTMPRGVLGM 331

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 332 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 391

Query: 121 ELKWD 125
            L WD
Sbjct: 392 ALSWD 396


>gi|317402620|gb|EFV83180.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter
           xylosoxidans C54]
          Length = 399

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN +K+ENPHLWT EF+++ R +  +A  LE AYA +TMP+G +GL
Sbjct: 275 LRDESMHCNFGIDLINTVKLENPHLWTPEFREEIRELFRKAVELEYAYAEDTMPRGVLGL 334

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRRC QIG+EPL+   ENPFPWM+E+IDLKKE+NFFETRV EYQ G 
Sbjct: 335 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 394

Query: 121 ELKWD 125
            L W+
Sbjct: 395 TLSWE 399


>gi|297538242|ref|YP_003674011.1| Ribonucleoside-diphosphate reductase [Methylotenera sp. 301]
 gi|297257589|gb|ADI29434.1| Ribonucleoside-diphosphate reductase [Methylotenera sp. 301]
          Length = 376

 Score =  205 bits (522), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGIDVIN IK+ENPHLWT EF+++ +T++ +   LE  YA  TMP+G +GL
Sbjct: 252 LRDESMHCNFGIDVINTIKLENPHLWTAEFREEIKTLMQKGVELEYQYAEATMPRGVLGL 311

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   ++Y++FIANRRC QIGL+ L+    NPFPWMSE++DLKKEKNFFETRVTEYQ G 
Sbjct: 312 NATMFKEYLRFIANRRCTQIGLDVLYPGATNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 371

Query: 121 ELKWD 125
            L WD
Sbjct: 372 ALSWD 376


>gi|192360823|ref|YP_001982048.1| ribonucleotide-diphosphate reductase subunit beta [Cellvibrio
           japonicus Ueda107]
 gi|190686988|gb|ACE84666.1| ribonucleoside reductase, beta subunit [Cellvibrio japonicus
           Ueda107]
          Length = 429

 Score =  205 bits (522), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 82/125 (65%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENPHLWT EFQQ+   M+ E T LEI YA ++MP+G +G+
Sbjct: 305 LRDESMHLNFGIDVINQIKLENPHLWTAEFQQEVLQMILEGTELEIQYARDSMPRGVLGM 364

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRRC Q+GL+  F   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 365 NAAMMEEYLHFIANRRCAQLGLKEQFPGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 424

Query: 121 ELKWD 125
            L WD
Sbjct: 425 ALSWD 429


>gi|113869188|ref|YP_727677.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           eutropha H16]
 gi|113527964|emb|CAJ94309.1| Ribonucleoside-diphosphate reductase beta subunit [Ralstonia
           eutropha H16]
          Length = 395

 Score =  205 bits (522), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 81/125 (64%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 271 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 330

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 331 NAPMFKSYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 390

Query: 121 ELKWD 125
            L WD
Sbjct: 391 ALSWD 395


>gi|94312018|ref|YP_585228.1| ribonucleotide-diphosphate reductase subunit beta [Cupriavidus
           metallidurans CH34]
 gi|93355870|gb|ABF09959.1| Ribonucleoside-diphosphate reductase beta subunit [Cupriavidus
           metallidurans CH34]
          Length = 395

 Score =  205 bits (522), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 81/125 (64%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 271 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 330

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 331 NAPMFKGYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 390

Query: 121 ELKWD 125
            L WD
Sbjct: 391 ALSWD 395


>gi|73542624|ref|YP_297144.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           eutropha JMP134]
 gi|72120037|gb|AAZ62300.1| Ribonucleoside-diphosphate reductase [Ralstonia eutropha JMP134]
          Length = 394

 Score =  205 bits (522), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 81/125 (64%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 270 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 329

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 330 NAPMFKSYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 389

Query: 121 ELKWD 125
            L WD
Sbjct: 390 ALSWD 394


>gi|221202418|ref|ZP_03575450.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD2M]
 gi|221208122|ref|ZP_03581127.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD2]
 gi|221172025|gb|EEE04467.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD2]
 gi|221177695|gb|EEE10110.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD2M]
          Length = 372

 Score =  205 bits (522), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 248 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 307

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 308 NASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 367

Query: 121 ELKWD 125
            L W+
Sbjct: 368 ALSWE 372


>gi|170695324|ref|ZP_02886470.1| Ribonucleoside-diphosphate reductase [Burkholderia graminis C4D1M]
 gi|170139724|gb|EDT07906.1| Ribonucleoside-diphosphate reductase [Burkholderia graminis C4D1M]
          Length = 414

 Score =  204 bits (521), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 290 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 349

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 350 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 409

Query: 121 ELKWD 125
            L W+
Sbjct: 410 ALTWE 414


>gi|254282900|ref|ZP_04957868.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium NOR51-B]
 gi|219679103|gb|EED35452.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium NOR51-B]
          Length = 421

 Score =  204 bits (521), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENPHLWT EFQ++   M+ E T LEI YA +TMP+G +G+
Sbjct: 297 LRDESMHLNFGIDVINQIKLENPHLWTAEFQEEVVQMILEGTQLEIEYARDTMPRGVLGM 356

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFI NRR +Q+GL   +   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 357 NAAMMEEYLQFICNRRLNQLGLSEQYPGVQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 416

Query: 121 ELKWD 125
            L WD
Sbjct: 417 ALTWD 421


>gi|299533977|ref|ZP_07047329.1| ribonucleotide-diphosphate reductase subunit beta [Comamonas
           testosteroni S44]
 gi|298717886|gb|EFI58891.1| ribonucleotide-diphosphate reductase subunit beta [Comamonas
           testosteroni S44]
          Length = 363

 Score =  204 bits (521), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENPHLWT EF+Q+   +  +A  LE  YA +TMP+G +G+
Sbjct: 239 LRDESMHCNFGIDLINQLKLENPHLWTAEFKQEITELFQKAVELEYRYAEDTMPRGVLGM 298

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 299 NASMFKGYLRYIANRRATQIGLEELFPGEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 358

Query: 121 ELKWD 125
            L WD
Sbjct: 359 ALSWD 363


>gi|253997287|ref|YP_003049351.1| Ribonucleoside-diphosphate reductase [Methylotenera mobilis JLW8]
 gi|253983966|gb|ACT48824.1| Ribonucleoside-diphosphate reductase [Methylotenera mobilis JLW8]
          Length = 377

 Score =  204 bits (521), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGIDVIN IK+ENPHLWT EF+ + + ++     LE  YA  TMP+G +GL
Sbjct: 253 LRDESMHCNFGIDVINTIKLENPHLWTAEFRDEIKGLIQHGVELEYRYAEATMPRGVLGL 312

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   ++Y++FIANRRC QIGL+ L++   NPFPWMSE+IDLKKEKNFFETRVTEYQ G 
Sbjct: 313 NATMFKEYLRFIANRRCQQIGLDVLYQGATNPFPWMSEMIDLKKEKNFFETRVTEYQTGG 372

Query: 121 ELKWD 125
            L WD
Sbjct: 373 ALSWD 377


>gi|323527395|ref|YP_004229548.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1001]
 gi|323384397|gb|ADX56488.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1001]
          Length = 414

 Score =  204 bits (520), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 290 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 349

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 350 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 409

Query: 121 ELKWD 125
            L W+
Sbjct: 410 ALTWE 414


>gi|326315613|ref|YP_004233285.1| ribonucleoside-diphosphate reductase [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323372449|gb|ADX44718.1| Ribonucleoside-diphosphate reductase [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 387

 Score =  204 bits (520), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 77/125 (61%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENPHLWT EF+++ + +  +A  LE  YA +TMP+G +G+
Sbjct: 263 LRDESMHCNFGIDLINQLKLENPHLWTAEFKEEIKGLFMKAVELEYQYAEDTMPRGVLGM 322

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 323 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 382

Query: 121 ELKWD 125
            L WD
Sbjct: 383 ALSWD 387


>gi|221065168|ref|ZP_03541273.1| Ribonucleoside-diphosphate reductase [Comamonas testosteroni KF-1]
 gi|220710191|gb|EED65559.1| Ribonucleoside-diphosphate reductase [Comamonas testosteroni KF-1]
          Length = 363

 Score =  204 bits (520), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 78/125 (62%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENPHLWT EF+Q+   +   A  LE  YA +TMP+G +G+
Sbjct: 239 LRDESMHCNFGIDLINQLKLENPHLWTAEFKQEITELFQRAVELEYRYAEDTMPRGVLGM 298

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 299 NASMFKGYLRYIANRRATQIGLEELFPGEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 358

Query: 121 ELKWD 125
            L WD
Sbjct: 359 ALSWD 363


>gi|121598515|ref|YP_991780.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           mallei SAVP1]
 gi|124385654|ref|YP_001027273.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           mallei NCTC 10229]
 gi|126439848|ref|YP_001060484.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 668]
 gi|126451145|ref|YP_001082790.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           mallei NCTC 10247]
 gi|126453692|ref|YP_001067748.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 1106a]
 gi|134280207|ref|ZP_01766918.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 305]
 gi|166998593|ref|ZP_02264451.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei PRL-20]
 gi|167721297|ref|ZP_02404533.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei DM98]
 gi|167740266|ref|ZP_02413040.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 14]
 gi|167817486|ref|ZP_02449166.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 91]
 gi|167847373|ref|ZP_02472881.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei B7210]
 gi|167895962|ref|ZP_02483364.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 7894]
 gi|167904346|ref|ZP_02491551.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei NCTC 13177]
 gi|167912606|ref|ZP_02499697.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 112]
 gi|217420440|ref|ZP_03451945.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 576]
 gi|226196790|ref|ZP_03792369.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei Pakistan 9]
 gi|237813879|ref|YP_002898330.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei MSHR346]
 gi|238561262|ref|ZP_00442338.2| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei GB8 horse 4]
 gi|242316188|ref|ZP_04815204.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1106b]
 gi|254178822|ref|ZP_04885476.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei ATCC 10399]
 gi|254199038|ref|ZP_04905453.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei S13]
 gi|254202774|ref|ZP_04909137.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei FMH]
 gi|254259655|ref|ZP_04950709.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1710a]
 gi|254299327|ref|ZP_04966777.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 406e]
 gi|121227325|gb|ABM49843.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei SAVP1]
 gi|124293674|gb|ABN02943.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei NCTC 10229]
 gi|126219341|gb|ABN82847.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 668]
 gi|126227334|gb|ABN90874.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1106a]
 gi|126244015|gb|ABO07108.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei NCTC 10247]
 gi|134248214|gb|EBA48297.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 305]
 gi|147747021|gb|EDK54098.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei FMH]
 gi|157808756|gb|EDO85926.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 406e]
 gi|160694736|gb|EDP84744.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei ATCC 10399]
 gi|169656868|gb|EDS88265.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei S13]
 gi|217395852|gb|EEC35869.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 576]
 gi|225931050|gb|EEH27058.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei Pakistan 9]
 gi|237506031|gb|ACQ98349.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei MSHR346]
 gi|238524965|gb|EEP88395.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei GB8 horse 4]
 gi|242139427|gb|EES25829.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1106b]
 gi|243065276|gb|EES47462.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei PRL-20]
 gi|254218344|gb|EET07728.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1710a]
          Length = 403

 Score =  204 bits (519), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|312795100|ref|YP_004028022.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           rhizoxinica HKI 454]
 gi|312166875|emb|CBW73878.1| Ribonucleoside-diphosphate reductase beta chain (EC 1.17.4.1)
           [Burkholderia rhizoxinica HKI 454]
          Length = 416

 Score =  204 bits (519), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT  F+++   +   A  LE  YA +TMP+G +GL
Sbjct: 292 LRDESMHCNFGIDLINQIKLENPHLWTPAFREEICGLFKHAVELEYRYAEDTMPRGVLGL 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGLEPLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 352 NAGMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L W+
Sbjct: 412 ALSWE 416


>gi|311103857|ref|YP_003976710.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter
           xylosoxidans A8]
 gi|310758546|gb|ADP13995.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter
           xylosoxidans A8]
          Length = 399

 Score =  203 bits (518), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN +K+ENPHLWT EF+++ R +  +A  LE AYA +TMP+G +GL
Sbjct: 275 LRDESMHCNFGIDLINTVKLENPHLWTPEFREEIRELFRKAVELEYAYAEDTMPRGVLGL 334

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRRC QIG+EPL+   ENPFPWM+E+IDLKKE+NFFETRV EYQ G 
Sbjct: 335 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 394

Query: 121 ELKWD 125
            L W+
Sbjct: 395 TLSWE 399


>gi|289208615|ref|YP_003460681.1| ribonucleoside-diphosphate reductase [Thioalkalivibrio sp. K90mix]
 gi|288944246|gb|ADC71945.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp. K90mix]
          Length = 412

 Score =  203 bits (518), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 82/125 (65%), Positives = 102/125 (81%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIK+ENPHLWT+EF+ + RT++ +A  LE  YA +TMP+G +G+
Sbjct: 288 LRDESMHMNFGIDVINQIKVENPHLWTEEFKNEMRTLISDAVELEAQYARDTMPRGVLGM 347

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRRC QIGL  ++   +NPFPWMSEV+DLKKEKNFFETRVTEYQ G 
Sbjct: 348 NAQMFEEYLHFIANRRCAQIGLAEMYPGADNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 407

Query: 121 ELKWD 125
            L WD
Sbjct: 408 ALSWD 412


>gi|83719302|ref|YP_441701.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis E264]
 gi|83653127|gb|ABC37190.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           thailandensis E264]
          Length = 377

 Score =  203 bits (517), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 253 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 312

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 313 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 372

Query: 121 ELKWD 125
            L W+
Sbjct: 373 ALSWE 377


>gi|91787004|ref|YP_547956.1| ribonucleotide-diphosphate reductase subunit beta [Polaromonas sp.
           JS666]
 gi|91696229|gb|ABE43058.1| Ribonucleoside-diphosphate reductase [Polaromonas sp. JS666]
          Length = 406

 Score =  203 bits (517), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENPHLWT EF+ + + +  +A  LE  YA +TMP+G +GL
Sbjct: 282 LRDESMHCNFGIDLINQLKLENPHLWTAEFKAEIKALFLKAVELEYRYAEDTMPRGVLGL 341

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 342 NASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 401

Query: 121 ELKWD 125
            L WD
Sbjct: 402 ALSWD 406


>gi|76808925|ref|YP_334881.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 1710b]
 gi|254208116|ref|ZP_04914466.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei JHU]
 gi|76578378|gb|ABA47853.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           pseudomallei 1710b]
 gi|147752010|gb|EDK59077.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei JHU]
          Length = 376

 Score =  203 bits (517), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 252 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 311

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 312 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 371

Query: 121 ELKWD 125
            L W+
Sbjct: 372 ALSWE 376


>gi|82703584|ref|YP_413150.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosospira
           multiformis ATCC 25196]
 gi|82411649|gb|ABB75758.1| Ribonucleoside-diphosphate reductase [Nitrosospira multiformis ATCC
           25196]
          Length = 408

 Score =  203 bits (517), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 81/125 (64%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGIDV+NQIK+ENPHLWTKEF+ +   ++ +A  LE  YA +TMP+G +GL
Sbjct: 284 LRDESMHCNFGIDVVNQIKMENPHLWTKEFRSEISALMQKAVELEYRYAEDTMPRGVLGL 343

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  ++Y+++IANRRC QIGL+ L+    NPFPWMSE+IDLKKEKNFFETRVTEYQ G 
Sbjct: 344 NAPMFKEYLRYIANRRCQQIGLDILYPGASNPFPWMSEMIDLKKEKNFFETRVTEYQTGG 403

Query: 121 ELKWD 125
            L WD
Sbjct: 404 VLNWD 408


>gi|319791701|ref|YP_004153341.1| ribonucleoside-diphosphate reductase [Variovorax paradoxus EPS]
 gi|315594164|gb|ADU35230.1| Ribonucleoside-diphosphate reductase [Variovorax paradoxus EPS]
          Length = 411

 Score =  203 bits (517), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 76/125 (60%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENP LWT EF+ + + +   A  LE  YA +TMP+G +G+
Sbjct: 287 LRDESMHCNFGIDLINQLKLENPGLWTPEFKAEIKDLFMRAVELEYKYAEDTMPRGVLGM 346

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 347 NASMFKGYLRYIANRRAQQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 406

Query: 121 ELKWD 125
            L WD
Sbjct: 407 ALSWD 411


>gi|307546480|ref|YP_003898959.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas
           elongata DSM 2581]
 gi|307218504|emb|CBV43774.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas
           elongata DSM 2581]
          Length = 415

 Score =  202 bits (516), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 82/125 (65%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFG+D+INQIKIENPHLWT EFQ +   M+ E T LEIAYA ++MP+G +G+
Sbjct: 291 LRDESMHLNFGVDMINQIKIENPHLWTPEFQDECTQMILEGTELEIAYARDSMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FI NRR  QIGL+  F   +NPFPWMSE+IDL+KEKNFFETRVTEYQ G 
Sbjct: 351 NAAIMEEYLHFICNRRLAQIGLKEQFPGAQNPFPWMSEIIDLRKEKNFFETRVTEYQVGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|293603286|ref|ZP_06685715.1| ribonucleotide-diphosphate reductase subunit beta subunit
           [Achromobacter piechaudii ATCC 43553]
 gi|292818321|gb|EFF77373.1| ribonucleotide-diphosphate reductase subunit beta subunit
           [Achromobacter piechaudii ATCC 43553]
          Length = 398

 Score =  202 bits (516), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 78/125 (62%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN +K+ENPHLWT  F+++ R +  +A  LE AYA +TMP+G +GL
Sbjct: 274 LRDESMHCNFGIDLINTVKLENPHLWTPAFREEIRELFRKAVELEYAYAEDTMPRGVLGL 333

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRRC QIG+EPL+   ENPFPWM+E+IDLKKE+NFFETRV EYQ G 
Sbjct: 334 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 393

Query: 121 ELKWD 125
            L W+
Sbjct: 394 TLSWE 398


>gi|149927167|ref|ZP_01915424.1| ribonucleotide-diphosphate reductase beta subunit [Limnobacter sp.
           MED105]
 gi|149824106|gb|EDM83327.1| ribonucleotide-diphosphate reductase beta subunit [Limnobacter sp.
           MED105]
          Length = 399

 Score =  202 bits (516), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 74/125 (59%), Positives = 94/125 (75%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES H  FGID+IN +K+ENPHLWT EF+++ + M  +A  LE AYA +TMP+G +GL
Sbjct: 275 LRDESAHCTFGIDLINTVKLENPHLWTPEFKEEIKAMFRKAVELEHAYAVDTMPRGVLGL 334

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N+    +YM+FI NRR +QIGL  L++   NPFPWMSE++DLKKE NFFE RVTEYQ G 
Sbjct: 335 NSAQFMEYMKFICNRRSNQIGLGTLYEGATNPFPWMSEMMDLKKETNFFERRVTEYQTGG 394

Query: 121 ELKWD 125
            L WD
Sbjct: 395 ALSWD 399


>gi|299065648|emb|CBJ36820.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Ralstonia solanacearum CMR15]
          Length = 398

 Score =  202 bits (516), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 274 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 333

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGL+ LF   +NPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 334 NAPMFKGYLRFICNRRCQQIGLDALFPNEDNPFPWMSEMIDLKKERNFFETRVIEYQTGG 393

Query: 121 ELKWD 125
            L WD
Sbjct: 394 ALSWD 398


>gi|17547523|ref|NP_520925.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           solanacearum GMI1000]
 gi|17429827|emb|CAD16511.1| putative transmembrane ribonucleoside reductase (small chain)
           oxidoreductase protein [Ralstonia solanacearum GMI1000]
          Length = 400

 Score =  202 bits (516), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 276 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 335

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGL+ LF   +NPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 336 NAPMFKGYLRFICNRRCQQIGLDALFPNEDNPFPWMSEMIDLKKERNFFETRVIEYQTGG 395

Query: 121 ELKWD 125
            L WD
Sbjct: 396 ALSWD 400


>gi|167586060|ref|ZP_02378448.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           ubonensis Bu]
          Length = 403

 Score =  202 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVDLEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|167574685|ref|ZP_02367559.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           oklahomensis C6786]
          Length = 369

 Score =  202 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 245 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 304

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 305 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 364

Query: 121 ELKWD 125
            L W+
Sbjct: 365 ALSWE 369


>gi|88705571|ref|ZP_01103281.1| ribonucleoside-diphosphate reductase, beta subunit [Congregibacter
           litoralis KT71]
 gi|88700084|gb|EAQ97193.1| ribonucleoside-diphosphate reductase, beta subunit [Congregibacter
           litoralis KT71]
          Length = 469

 Score =  202 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 82/125 (65%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENP LWT+EF+Q++  M+ E T LEI YA +TMP+G +G+
Sbjct: 345 LRDESMHLNFGIDVINQIKLENPQLWTEEFKQEAIQMILEGTQLEIEYARDTMPRGVLGM 404

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFIANRR  QIGL   F   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 405 NAAMMEEYLQFIANRRLSQIGLPEQFPGVQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 464

Query: 121 ELKWD 125
            L WD
Sbjct: 465 ALSWD 469


>gi|264680215|ref|YP_003280125.1| ribonucleotide reductase [Comamonas testosteroni CNB-2]
 gi|262210731|gb|ACY34829.1| ribonucleotide reductase [Comamonas testosteroni CNB-2]
          Length = 336

 Score =  202 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENPHLWT EF+Q+   +  +A  LE  YA +TMP+G +G+
Sbjct: 212 LRDESMHCNFGIDLINQLKLENPHLWTAEFKQEITELFQKAVELEYRYAEDTMPRGVLGM 271

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 272 NASMFKGYLRYIANRRATQIGLEELFPGEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 331

Query: 121 ELKWD 125
            L WD
Sbjct: 332 ALSWD 336


>gi|167825888|ref|ZP_02457359.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 9]
 gi|167924622|ref|ZP_02511713.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei BCC215]
 gi|254180586|ref|ZP_04887184.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1655]
 gi|254190977|ref|ZP_04897483.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei Pasteur 52237]
 gi|157938651|gb|EDO94321.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei Pasteur 52237]
 gi|184211125|gb|EDU08168.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1655]
          Length = 372

 Score =  202 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 248 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 307

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 308 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 367

Query: 121 ELKWD 125
            L W+
Sbjct: 368 ALSWE 372


>gi|254516739|ref|ZP_05128798.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium NOR5-3]
 gi|219675162|gb|EED31529.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium NOR5-3]
          Length = 441

 Score =  202 bits (515), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 83/125 (66%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENPHLWT+EF+Q++  M+ E T LEI YA +TMP+G +G+
Sbjct: 317 LRDESMHLNFGIDVINQIKLENPHLWTEEFKQEAIQMILEGTQLEIEYARDTMPRGVLGM 376

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFIANRR  QIGL   F   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 377 NAAMMEEYLQFIANRRLSQIGLPEQFPGVQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 436

Query: 121 ELKWD 125
            L WD
Sbjct: 437 ALSWD 441


>gi|194290770|ref|YP_002006677.1| ribonucleotide-diphosphate reductase subunit beta [Cupriavidus
           taiwanensis LMG 19424]
 gi|193224605|emb|CAQ70616.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Cupriavidus taiwanensis LMG 19424]
          Length = 396

 Score =  202 bits (515), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 81/125 (64%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 272 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 331

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 332 NAPMFKSYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 391

Query: 121 ELKWD 125
            L WD
Sbjct: 392 ALSWD 396


>gi|330983931|gb|EGH82034.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. lachrymans str. M301315]
          Length = 388

 Score =  202 bits (515), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 81/125 (64%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT E ++++  M+ + T LEIAYA +TMP+G +G+
Sbjct: 264 LRDESMHLNFGIDMINQIKIENPHLWTDELKREATVMIIQGTQLEIAYARDTMPRGVLGM 323

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFIANRR  QIGL  ++   +NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 324 NAAMMEEYLQFIANRRLTQIGLPEVYAGAKNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 383

Query: 121 ELKWD 125
            L WD
Sbjct: 384 ALSWD 388


>gi|239813962|ref|YP_002942872.1| ribonucleotide-diphosphate reductase subunit beta [Variovorax
           paradoxus S110]
 gi|239800539|gb|ACS17606.1| Ribonucleoside-diphosphate reductase [Variovorax paradoxus S110]
          Length = 391

 Score =  202 bits (515), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 76/125 (60%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENP LWT EF+ + + +  +A  LE  YA +TMP+G +G+
Sbjct: 267 LRDESMHCNFGIDLINQLKLENPGLWTPEFKAEIKALFLKAVELEYKYAEDTMPRGVLGM 326

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 327 NASMFKGYLRYIANRRAQQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 386

Query: 121 ELKWD 125
            L WD
Sbjct: 387 ALSWD 391


>gi|167564160|ref|ZP_02357076.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           oklahomensis EO147]
          Length = 369

 Score =  202 bits (515), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 245 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 304

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 305 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 364

Query: 121 ELKWD 125
            L W+
Sbjct: 365 ALSWE 369


>gi|254780845|ref|YP_003065258.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254780964|ref|YP_003065377.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040522|gb|ACT57318.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040641|gb|ACT57437.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 352

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 125/125 (100%), Positives = 125/125 (100%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL
Sbjct: 228 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 287

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA
Sbjct: 288 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 347

Query: 121 ELKWD 125
           ELKWD
Sbjct: 348 ELKWD 352


>gi|120609557|ref|YP_969235.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax
           citrulli AAC00-1]
 gi|120588021|gb|ABM31461.1| Ribonucleoside-diphosphate reductase [Acidovorax citrulli AAC00-1]
          Length = 387

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 77/125 (61%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENPHLWT EF+++ + +  +A  LE  YA +TMP+G +G+
Sbjct: 263 LRDESMHCNFGIDLINQLKLENPHLWTAEFKEEIKGLFMKAVELEYQYAEDTMPRGVLGM 322

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 323 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 382

Query: 121 ELKWD 125
            L WD
Sbjct: 383 ALSWD 387


>gi|72163401|ref|YP_291058.1| ribonucleotide-diphosphate reductase subunit beta [Thermobifida
           fusca YX]
 gi|71917133|gb|AAZ57035.1| ribonucleoside-diphosphate reductase [Thermobifida fusca YX]
          Length = 354

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 91/125 (72%), Positives = 104/125 (83%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLWT+EFQ + RTML EA  LE AY  ETMP+G +GL
Sbjct: 230 LRDESIHLNFGIDVINQIKIENPHLWTEEFQDEVRTMLIEACELEAAYGRETMPRGILGL 289

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CEQYM+FI +RR  Q+GL P+F  TENPFPWMSE++DLKKEKNFFETRV EYQ G+
Sbjct: 290 NAKLCEQYMRFITDRRAEQLGLAPIFGETENPFPWMSEMMDLKKEKNFFETRVIEYQTGS 349

Query: 121 ELKWD 125
            L WD
Sbjct: 350 GLSWD 354


>gi|241764092|ref|ZP_04762129.1| Ribonucleoside-diphosphate reductase [Acidovorax delafieldii 2AN]
 gi|241366556|gb|EER61044.1| Ribonucleoside-diphosphate reductase [Acidovorax delafieldii 2AN]
          Length = 398

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 77/125 (61%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENPHLWT EF+ + + +   A  LE  YA +TMP+G +G+
Sbjct: 274 LRDESMHCNFGIDLINQLKLENPHLWTAEFKAEIKALFMRAVELEYRYAEDTMPRGVLGM 333

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 334 NASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 393

Query: 121 ELKWD 125
            L WD
Sbjct: 394 ALSWD 398


>gi|226940720|ref|YP_002795794.1| ribonucleotide-diphosphate reductase subunit beta [Laribacter
           hongkongensis HLHK9]
 gi|226715647|gb|ACO74785.1| Ribonucleoside-diphosphate reductase beta chain [Laribacter
           hongkongensis HLHK9]
          Length = 357

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 83/125 (66%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK ENPHLWT EFQ++   +  +A  LE AYA +TMP+G +GL
Sbjct: 233 LRDESMHCNFGIDLINSIKQENPHLWTVEFQEELYGLFRKAIDLEYAYAEDTMPRGVLGL 292

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   ++Y+ FIANRR  QIGLEPLF + +NPFPWMSE+IDLKKEKNFFETRVTEYQ G 
Sbjct: 293 NAAMFKEYLDFIANRRMQQIGLEPLFTHVDNPFPWMSEMIDLKKEKNFFETRVTEYQSGG 352

Query: 121 ELKWD 125
            L WD
Sbjct: 353 ALDWD 357


>gi|226945386|ref|YP_002800459.1| ribonucleotide-diphosphate reductase subunit beta [Azotobacter
           vinelandii DJ]
 gi|226720313|gb|ACO79484.1| Ribonucleoside-diphosphate reductase beta subunit [Azotobacter
           vinelandii DJ]
          Length = 416

 Score =  201 bits (513), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 78/125 (62%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLW  E + ++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDMINQIKIENPHLWDAEMKDEATQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  Q+GL   +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NATMMEDYLKFIANRRLSQLGLPEQYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|332526550|ref|ZP_08402662.1| ribonucleotide-diphosphate reductase subunit beta [Rubrivivax
           benzoatilyticus JA2]
 gi|332110818|gb|EGJ10995.1| ribonucleotide-diphosphate reductase subunit beta [Rubrivivax
           benzoatilyticus JA2]
          Length = 385

 Score =  201 bits (513), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 76/125 (60%), Positives = 94/125 (75%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT  F+ + R +   A  LE  YA +TMP+G +G+
Sbjct: 261 LRDESMHCNFGIDLINQIKLENPQLWTPAFKAEIRALFERAVELEYRYAEDTMPRGVLGM 320

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV +YQ G 
Sbjct: 321 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIDYQSGG 380

Query: 121 ELKWD 125
            L WD
Sbjct: 381 ALSWD 385


>gi|241664219|ref|YP_002982579.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           pickettii 12D]
 gi|309783064|ref|ZP_07677783.1| ribonucleoside-diphosphate reductase, beta subunit [Ralstonia sp.
           5_7_47FAA]
 gi|240866246|gb|ACS63907.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D]
 gi|308918172|gb|EFP63850.1| ribonucleoside-diphosphate reductase, beta subunit [Ralstonia sp.
           5_7_47FAA]
          Length = 402

 Score =  201 bits (513), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 338 NAPMFKGYLRFICNRRCQQIGLDALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397

Query: 121 ELKWD 125
            L W+
Sbjct: 398 ALSWE 402


>gi|89902117|ref|YP_524588.1| ribonucleotide-diphosphate reductase subunit beta [Rhodoferax
           ferrireducens T118]
 gi|89346854|gb|ABD71057.1| Ribonucleoside-diphosphate reductase [Rhodoferax ferrireducens
           T118]
          Length = 400

 Score =  201 bits (512), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 76/125 (60%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENP LWT EF+ + + +  +A  LE  YA +TMP+G +G+
Sbjct: 276 LRDESMHCNFGIDLINQLKLENPQLWTSEFKAEIKALFEQAVELEYRYAEDTMPRGVLGM 335

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 336 NASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 395

Query: 121 ELKWD 125
            L WD
Sbjct: 396 ALSWD 400


>gi|331006663|ref|ZP_08329944.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
           proteobacterium IMCC1989]
 gi|330419531|gb|EGG93916.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
           proteobacterium IMCC1989]
          Length = 444

 Score =  201 bits (512), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 78/125 (62%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIK+ENPHLWT+EF+ +   M+ E T LEIAYA +TMP+G +G+
Sbjct: 320 LRDESMHLNFGIDIINQIKLENPHLWTEEFKAEVTQMVLEGTELEIAYARDTMPRGVLGM 379

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFI+NRR  Q+GL   +   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 380 NAAMMEEYLQFISNRRLAQLGLTEQYPGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 439

Query: 121 ELKWD 125
            L W+
Sbjct: 440 ALTWE 444


>gi|124268397|ref|YP_001022401.1| ribonucleotide-diphosphate reductase subunit beta [Methylibium
           petroleiphilum PM1]
 gi|124261172|gb|ABM96166.1| Ribonucleoside-diphosphate reductase [Methylibium petroleiphilum
           PM1]
          Length = 403

 Score =  201 bits (512), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 78/125 (62%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT EF+ + + +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPQLWTAEFKAEIKALFMKAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKGYLRYIANRRATQIGLEELFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 398

Query: 121 ELKWD 125
            L WD
Sbjct: 399 ALSWD 403


>gi|90022104|ref|YP_527931.1| ribonucleotide-diphosphate reductase subunit beta [Saccharophagus
           degradans 2-40]
 gi|89951704|gb|ABD81719.1| Class Ia ribonucleoside-diphosphate reductase beta subunit
           [Saccharophagus degradans 2-40]
          Length = 423

 Score =  201 bits (512), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENPHLWT+EFQ +++ M+ E T LEIAYA +TMP+G +G+
Sbjct: 299 LRDESMHLNFGIDVINQIKLENPHLWTEEFQAETKQMILEGTELEIAYARDTMPRGVLGM 358

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRR  Q+GL   +   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 359 NAAMMEEYLHFIANRRMAQLGLAEAYPGAKNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 418

Query: 121 ELKWD 125
            L W+
Sbjct: 419 ALSWE 423


>gi|53720599|ref|YP_109585.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei K96243]
 gi|53726102|ref|YP_104055.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           mallei ATCC 23344]
 gi|52211013|emb|CAH37001.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           pseudomallei K96243]
 gi|52429525|gb|AAU50118.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei ATCC 23344]
          Length = 350

 Score =  201 bits (512), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 226 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 285

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 286 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 345

Query: 121 ELKWD 125
            L W+
Sbjct: 346 ALSWE 350


>gi|167580513|ref|ZP_02373387.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis TXDOH]
 gi|167618621|ref|ZP_02387252.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis Bt4]
 gi|257137870|ref|ZP_05586132.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis E264]
          Length = 350

 Score =  201 bits (512), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 226 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 285

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 286 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 345

Query: 121 ELKWD 125
            L W+
Sbjct: 346 ALSWE 350


>gi|187930114|ref|YP_001900601.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           pickettii 12J]
 gi|187727004|gb|ACD28169.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12J]
          Length = 402

 Score =  201 bits (512), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 338 NAPMFKGYLRFICNRRCQQIGLDALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397

Query: 121 ELKWD 125
            L W+
Sbjct: 398 ALSWE 402


>gi|293609145|ref|ZP_06691448.1| ribonucleoside-diphosphate reductase [Acinetobacter sp. SH024]
 gi|292829718|gb|EFF88080.1| ribonucleoside-diphosphate reductase [Acinetobacter sp. SH024]
          Length = 427

 Score =  201 bits (512), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVVQMIVEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|300690381|ref|YP_003751376.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Ralstonia solanacearum PSI07]
 gi|299077441|emb|CBJ50067.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Ralstonia solanacearum PSI07]
          Length = 402

 Score =  201 bits (511), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 338 NAPMFKGYLRFICNRRCQQIGLDALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397

Query: 121 ELKWD 125
            L W+
Sbjct: 398 ALSWE 402


>gi|171057074|ref|YP_001789423.1| ribonucleotide-diphosphate reductase subunit beta [Leptothrix
           cholodnii SP-6]
 gi|170774519|gb|ACB32658.1| Ribonucleoside-diphosphate reductase [Leptothrix cholodnii SP-6]
          Length = 402

 Score =  201 bits (511), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 77/125 (61%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK+ENPHLWT  F+ + + +  +A  LE  YA +TMP+G +GL
Sbjct: 278 LRDESMHCNFGIDLINAIKLENPHLWTPAFKAEIKALFLKAVELEYRYAEDTMPRGVLGL 337

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 338 NASMFKGYLRYIANRRATQIGLEELFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 397

Query: 121 ELKWD 125
            L WD
Sbjct: 398 ALSWD 402


>gi|134097869|ref|YP_001103530.1| ribonucleotide-diphosphate reductase subunit beta
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291007412|ref|ZP_06565385.1| ribonucleotide-diphosphate reductase subunit beta
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133910492|emb|CAM00605.1| ribonucleoside-diphosphate reductase, beta subunit
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 360

 Score =  201 bits (511), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 90/125 (72%), Positives = 103/125 (82%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID INQIKIENPHLWT EFQ++ RTML EA  LE+AY  +TMP+G +GL
Sbjct: 236 LRDESIHLNFGIDCINQIKIENPHLWTPEFQEEVRTMLTEACELEVAYGRDTMPRGILGL 295

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CE+YM+FI NRRC Q+GLEP+F  T NPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 296 NAGLCEEYMRFITNRRCAQLGLEPVFPETANPFPWMSEAMDLKKEKNFFETRVIEYQSGG 355

Query: 121 ELKWD 125
            L WD
Sbjct: 356 ALDWD 360


>gi|325983070|ref|YP_004295472.1| ribonucleoside-diphosphate reductase [Nitrosomonas sp. AL212]
 gi|325532589|gb|ADZ27310.1| Ribonucleoside-diphosphate reductase [Nitrosomonas sp. AL212]
          Length = 381

 Score =  201 bits (511), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 78/125 (62%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGIDVINQIK+ENP LWTK F+++   ++ +A  LE  YA +TMP+G +G+
Sbjct: 257 LRDESMHCNFGIDVINQIKMENPQLWTKAFREEIAALMQKAVALEYRYAEDTMPRGVLGM 316

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  ++Y+++IANRRC QIGL+ L+    NPFPWMSE++DLKKEKNFFETRVTEYQ G 
Sbjct: 317 NAPMFKEYLRYIANRRCQQIGLDTLYPNANNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 376

Query: 121 ELKWD 125
            L WD
Sbjct: 377 ALSWD 381


>gi|160896947|ref|YP_001562529.1| ribonucleotide-diphosphate reductase subunit beta [Delftia
           acidovorans SPH-1]
 gi|160362531|gb|ABX34144.1| Ribonucleoside-diphosphate reductase [Delftia acidovorans SPH-1]
          Length = 363

 Score =  200 bits (510), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 76/125 (60%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENP LWT EF+++   +  +A  LE  YA +TMP+G +G+
Sbjct: 239 LRDESMHCNFGIDLINQLKLENPQLWTPEFKEEITALFVKAVELEYRYAEDTMPRGVLGM 298

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 299 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 358

Query: 121 ELKWD 125
            L WD
Sbjct: 359 ALSWD 363


>gi|184157022|ref|YP_001845361.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii ACICU]
 gi|183208616|gb|ACC56014.1| Ribonucleotide reductase, beta subunit [Acinetobacter baumannii
           ACICU]
          Length = 427

 Score =  200 bits (510), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|169797064|ref|YP_001714857.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AYE]
 gi|213156529|ref|YP_002318190.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii AB0057]
 gi|215484526|ref|YP_002326761.1| ribonucleotide-diphosphate reductase small chain [Acinetobacter
           baumannii AB307-0294]
 gi|239501302|ref|ZP_04660612.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB900]
 gi|260555643|ref|ZP_05827863.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii ATCC 19606]
 gi|301345633|ref|ZP_07226374.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB056]
 gi|301512780|ref|ZP_07238017.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB058]
 gi|301596291|ref|ZP_07241299.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB059]
 gi|169149991|emb|CAM87885.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii AYE]
 gi|193076530|gb|ABO11186.2| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter
           baumannii ATCC 17978]
 gi|213055689|gb|ACJ40591.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii AB0057]
 gi|213987168|gb|ACJ57467.1| ribonucleotide-diphosphate reductase small chain [Acinetobacter
           baumannii AB307-0294]
 gi|260410554|gb|EEX03852.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii ATCC 19606]
          Length = 427

 Score =  200 bits (510), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|260551040|ref|ZP_05825245.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
           sp. RUH2624]
 gi|260405988|gb|EEW99475.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
           sp. RUH2624]
          Length = 427

 Score =  200 bits (510), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|110635036|ref|YP_675244.1| ribonucleotide-diphosphate reductase subunit beta [Mesorhizobium
           sp. BNC1]
 gi|110286020|gb|ABG64079.1| ribonucleotide reductase [Chelativorans sp. BNC1]
          Length = 369

 Score =  200 bits (510), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 91/125 (72%), Positives = 102/125 (81%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK ENPHLWT EFQ++ R ML +A  LE AY  +TMP+GF+GL
Sbjct: 245 LRDESIHLNFGIDVINQIKHENPHLWTPEFQEELRRMLKDAAELEAAYGRDTMPRGFLGL 304

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CEQYM FIANRRC Q+GL P+F  TENPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 305 NAGQCEQYMHFIANRRCAQLGLPPVFPETENPFPWMSEAMDLKKEKNFFETRVIEYQNGG 364

Query: 121 ELKWD 125
            L WD
Sbjct: 365 ALSWD 369


>gi|291615085|ref|YP_003525242.1| ribonucleoside-diphosphate reductase [Sideroxydans lithotrophicus
           ES-1]
 gi|291585197|gb|ADE12855.1| Ribonucleoside-diphosphate reductase [Sideroxydans lithotrophicus
           ES-1]
          Length = 382

 Score =  200 bits (510), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 78/125 (62%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFG+DVINQIK+ENPHLWT  F+++ R ++ +   LE  YA +TMP+G +GL
Sbjct: 258 LRDESMHLNFGVDVINQIKLENPHLWTPAFREEVRGLIQKGVELEYRYAEDTMPRGVLGL 317

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   ++Y++FIANRRC QIG++ L++   NPFPWM+E+IDLKKEKNFFETRVTEYQ G 
Sbjct: 318 NAGMFKEYLRFIANRRCQQIGVDMLYQGATNPFPWMAEMIDLKKEKNFFETRVTEYQTGG 377

Query: 121 ELKWD 125
            L WD
Sbjct: 378 ALSWD 382


>gi|330811278|ref|YP_004355740.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327379386|gb|AEA70736.1| Ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 415

 Score =  200 bits (510), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|70731866|ref|YP_261608.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           fluorescens Pf-5]
 gi|68346165|gb|AAY93771.1| ribonucleoside-diphosphate reductase, beta subunit, putative
           [Pseudomonas fluorescens Pf-5]
          Length = 415

 Score =  200 bits (510), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|262373382|ref|ZP_06066661.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           junii SH205]
 gi|262313407|gb|EEY94492.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           junii SH205]
          Length = 427

 Score =  200 bits (509), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|74317993|ref|YP_315733.1| ribonucleotide-diphosphate reductase subunit beta [Thiobacillus
           denitrificans ATCC 25259]
 gi|74057488|gb|AAZ97928.1| ribonucleoside-diphosphate reductase beta chain [Thiobacillus
           denitrificans ATCC 25259]
          Length = 376

 Score =  200 bits (509), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 77/125 (61%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK ENPHLWT EF+ + RT++ +   LE  YA +TMP+G +GL
Sbjct: 252 LRDESMHCNFGIDLINTIKQENPHLWTSEFKAEIRTLIQKGVELEFRYAEDTMPRGVLGL 311

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N+   ++Y++FI+NRRC QIGL+ +F    NPFPWM+E+IDLKKEKNFFETRVTEYQ G 
Sbjct: 312 NSAQFKEYLRFISNRRCQQIGLDEMFPGVSNPFPWMAEMIDLKKEKNFFETRVTEYQTGG 371

Query: 121 ELKWD 125
            L WD
Sbjct: 372 ALSWD 376


>gi|169634186|ref|YP_001707922.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii SDF]
 gi|169152978|emb|CAP02026.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii]
          Length = 427

 Score =  200 bits (509), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|329902475|ref|ZP_08273120.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327548767|gb|EGF33404.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 416

 Score =  200 bits (509), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 78/125 (62%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID++N IK+ENPHLWT EF+ + + +   A  LE  YA +TMP+G +GL
Sbjct: 292 LRDESMHCNFGIDLVNTIKMENPHLWTPEFRDEIKALFLTAVELEYRYAEDTMPRGVLGL 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRR  QIGLEP+F+  ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 352 NAPMFKGYLRFIANRRAQQIGLEPMFENEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L W+
Sbjct: 412 ALSWE 416


>gi|329893650|ref|ZP_08269784.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
           proteobacterium IMCC3088]
 gi|328923577|gb|EGG30889.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
           proteobacterium IMCC3088]
          Length = 432

 Score =  200 bits (509), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENPHLWT++FQ++   ML E T +EI YA +TMP+G +G+
Sbjct: 308 LRDESMHLNFGIDVINQIKLENPHLWTEDFQKEVIQMLLEGTQIEIEYARDTMPRGVLGM 367

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFI NRR  Q+GL   F   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 368 NAAMMEEYLQFICNRRLAQLGLPEQFPGVQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 427

Query: 121 ELKWD 125
            L WD
Sbjct: 428 ALSWD 432


>gi|53804295|ref|YP_114081.1| ribonucleotide-diphosphate reductase subunit beta [Methylococcus
           capsulatus str. Bath]
 gi|53758056|gb|AAU92347.1| ribonucleoside-diphosphate reductase, beta subunit [Methylococcus
           capsulatus str. Bath]
          Length = 403

 Score =  200 bits (509), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 83/125 (66%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDES+H+NFGIDVINQIK+ENPHLWT  F+ +   M+ EA  +E  YA++TMP+G +GL
Sbjct: 279 MRDESMHMNFGIDVINQIKVENPHLWTDGFKVEMVQMIREAVDIETQYAYDTMPRGILGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  ++Y+QFIANRRC QIGL   +    NPFPWMSEV+DLKKEKNFFETRVTEYQ G 
Sbjct: 339 NAPMFKEYLQFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 398

Query: 121 ELKWD 125
            L WD
Sbjct: 399 TLSWD 403


>gi|158341282|ref|YP_001522354.1| ribonucleotide-diphosphate reductase subunit beta [Acaryochloris
           marina MBIC11017]
 gi|158311523|gb|ABW33134.1| ribonucleoside-diphosphate reductase, beta subunit [Acaryochloris
           marina MBIC11017]
          Length = 384

 Score =  200 bits (509), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 76/125 (60%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID++N IK ENPHLWT EF ++ R +   A  LE  YA +TMP+G +GL
Sbjct: 260 LRDESMHCNFGIDLVNAIKQENPHLWTPEFCEEIRDLFKRAVELEYRYAEDTMPRGVLGL 319

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGL+P+F   ENPFPWMSE++DLKKE+NFFETRV EYQ G 
Sbjct: 320 NASMFKSYLRYIANRRSQQIGLDPIFASEENPFPWMSEMVDLKKERNFFETRVLEYQTGG 379

Query: 121 ELKWD 125
            L WD
Sbjct: 380 ALSWD 384


>gi|50083944|ref|YP_045454.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. ADP1]
 gi|49529920|emb|CAG67632.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           sp. ADP1]
          Length = 427

 Score =  200 bits (509), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 78/124 (62%), Positives = 98/124 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGID+INQIKIENPHLWT EFQQ+   M+ E TLLEI YA +TMP+G +G+
Sbjct: 304 LRDESMHVNFGIDMINQIKIENPHLWTAEFQQEVIQMIVEGTLLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   ++   NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NAAMMEEYLKFICNRRLAQLGLPEQYRGVNNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|292490774|ref|YP_003526213.1| ribonucleoside-diphosphate reductase [Nitrosococcus halophilus Nc4]
 gi|291579369|gb|ADE13826.1| Ribonucleoside-diphosphate reductase [Nitrosococcus halophilus Nc4]
          Length = 415

 Score =  200 bits (509), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 85/125 (68%), Positives = 102/125 (81%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDES+H+NFGIDVINQIKIENPHLWT  F+Q++  M+ EA  LE  YA++TMP+G +GL
Sbjct: 291 MRDESMHMNFGIDVINQIKIENPHLWTDSFKQETIQMIREAVSLETQYAYDTMPRGVLGL 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  ++Y++FIANRRC QIGL   +    NPFPWMSE++DLKKEKNFFETRVTEYQ G 
Sbjct: 351 NAPMFDEYLKFIANRRCAQIGLPEQYPGASNPFPWMSEILDLKKEKNFFETRVTEYQTGG 410

Query: 121 ELKWD 125
            LKWD
Sbjct: 411 ALKWD 415


>gi|134095932|ref|YP_001101007.1| ribonucleotide-diphosphate reductase subunit beta [Herminiimonas
           arsenicoxydans]
 gi|133739835|emb|CAL62886.1| Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide
           reductase small subunit) [Herminiimonas arsenicoxydans]
          Length = 395

 Score =  199 bits (508), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 78/125 (62%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK+ENPHLWT +F+ + + +   A  LE  YA +TMP+G +GL
Sbjct: 271 LRDESMHCNFGIDLINTIKLENPHLWTPQFRDEIKALFLRAVELEYRYAEDTMPRGVLGL 330

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRR  QIGLEP+F+  ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 331 NAPMFKGYLRFIANRRAQQIGLEPMFEQEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 390

Query: 121 ELKWD 125
            L W+
Sbjct: 391 ALNWE 395


>gi|332872596|ref|ZP_08440564.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii 6014059]
 gi|332739125|gb|EGJ69984.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii 6014059]
          Length = 440

 Score =  199 bits (508), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 317 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 376

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 377 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 436

Query: 121 ELKW 124
            L W
Sbjct: 437 ALSW 440


>gi|332852155|ref|ZP_08433982.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii 6013150]
 gi|332867554|ref|ZP_08437707.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii 6013113]
 gi|332729527|gb|EGJ60866.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii 6013150]
 gi|332733971|gb|EGJ65116.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii 6013113]
          Length = 440

 Score =  199 bits (508), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 317 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 376

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 377 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 436

Query: 121 ELKW 124
            L W
Sbjct: 437 ALSW 440


>gi|330892405|gb|EGH25066.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 415

 Score =  199 bits (508), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|66046950|ref|YP_236791.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. syringae B728a]
 gi|237798938|ref|ZP_04587399.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|237806191|ref|ZP_04592895.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|63257657|gb|AAY38753.1| Ribonucleoside-diphosphate reductase [Pseudomonas syringae pv.
           syringae B728a]
 gi|330980156|gb|EGH78342.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. aptata str. DSM 50252]
 gi|331021792|gb|EGI01849.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331027304|gb|EGI07359.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 415

 Score =  199 bits (508), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|28868867|ref|NP_791486.1| ribonucleoside-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213969520|ref|ZP_03397656.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           syringae pv. tomato T1]
 gi|301385974|ref|ZP_07234392.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tomato Max13]
 gi|302058701|ref|ZP_07250242.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tomato K40]
 gi|302134408|ref|ZP_07260398.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|28852106|gb|AAO55181.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213925616|gb|EEB59175.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           syringae pv. tomato T1]
 gi|330960626|gb|EGH60886.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. maculicola str. ES4326]
 gi|331016758|gb|EGH96814.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 415

 Score =  199 bits (508), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|255019898|ref|ZP_05291973.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Acidithiobacillus caldus ATCC 51756]
 gi|254970678|gb|EET28165.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Acidithiobacillus caldus ATCC 51756]
          Length = 374

 Score =  199 bits (508), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 74/125 (59%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT+ FQ++  +++ +   LE AYA +TMP+G +GL
Sbjct: 250 LRDESMHCNFGIDLINQIKVENPDLWTEPFQEEIVSLIRKGVELECAYADDTMPRGVLGL 309

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y+++I NRR  Q+GL   +   +NPFPWMSE++DLKKEKNFFETRVTEYQ G 
Sbjct: 310 NAPIFKDYVKYIGNRRLQQLGLPVQWAGIQNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 369

Query: 121 ELKWD 125
            L WD
Sbjct: 370 ALSWD 374


>gi|320323423|gb|EFW79511.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320327620|gb|EFW83632.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330876273|gb|EGH10422.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 415

 Score =  199 bits (508), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|312960686|ref|ZP_07775192.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           fluorescens WH6]
 gi|311285212|gb|EFQ63787.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           fluorescens WH6]
          Length = 416

 Score =  199 bits (508), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|71737432|ref|YP_275887.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|257485935|ref|ZP_05639976.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|289628680|ref|ZP_06461634.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289648392|ref|ZP_06479735.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|298487941|ref|ZP_07005980.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|302184861|ref|ZP_07261534.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. syringae 642]
 gi|71557985|gb|AAZ37196.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|298157492|gb|EFH98573.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|330866023|gb|EGH00732.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. aesculi str. 0893_23]
 gi|330896997|gb|EGH28545.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. japonica str. M301072PT]
 gi|330986742|gb|EGH84845.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. lachrymans str. M301315]
 gi|331010341|gb|EGH90397.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 415

 Score =  199 bits (508), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|209885874|ref|YP_002289731.1| ribonucleoside-diphosphate reductase, beta subunit [Oligotropha
           carboxidovorans OM5]
 gi|209874070|gb|ACI93866.1| ribonucleoside-diphosphate reductase, beta subunit [Oligotropha
           carboxidovorans OM5]
          Length = 377

 Score =  199 bits (508), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 92/125 (73%), Positives = 102/125 (81%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENPHLWTK FQ + R M+ EA  LE AY  +TMP+GF+GL
Sbjct: 253 LRDESIHLNFGIDVINQIKLENPHLWTKAFQDEVRGMISEAAGLEAAYGRDTMPRGFLGL 312

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CEQYM FIANRRC QIGL P+F  TENPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 313 NAALCEQYMHFIANRRCAQIGLAPVFAETENPFPWMSEAMDLKKEKNFFETRVIEYQNGG 372

Query: 121 ELKWD 125
            L WD
Sbjct: 373 ALSWD 377


>gi|119504228|ref|ZP_01626308.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
           proteobacterium HTCC2080]
 gi|119459736|gb|EAW40831.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
           proteobacterium HTCC2080]
          Length = 419

 Score =  199 bits (508), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 82/125 (65%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENP LWT EFQQ++  M+ E T LEIAYA +TMP+G +G+
Sbjct: 295 LRDESMHLNFGIDVINQIKLENPLLWTPEFQQEAIQMILEGTELEIAYARDTMPRGVLGM 354

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFI NRR +Q+GL   F   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 355 NAAMMEEYLQFICNRRLNQVGLPEQFPGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 414

Query: 121 ELKWD 125
            L WD
Sbjct: 415 ALTWD 419


>gi|54294662|ref|YP_127077.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           pneumophila str. Lens]
 gi|53754494|emb|CAH15978.1| hypothetical protein lpl1739 [Legionella pneumophila str. Lens]
          Length = 367

 Score =  199 bits (508), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLWT EF+ +   ++ E   LE  YA +TMP G +G+
Sbjct: 241 LRDESMHMNFGIDVINQIKIENPHLWTPEFKNEIIQLIREGVELEYQYARDTMPHGILGM 300

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRR +QIGL   +   ENPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 301 NAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFFETRVIEYQAGG 360

Query: 121 ELKWD 125
            L WD
Sbjct: 361 TLSWD 365


>gi|121606275|ref|YP_983604.1| ribonucleotide-diphosphate reductase subunit beta [Polaromonas
           naphthalenivorans CJ2]
 gi|120595244|gb|ABM38683.1| Ribonucleoside-diphosphate reductase [Polaromonas naphthalenivorans
           CJ2]
          Length = 387

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 77/125 (61%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENP LWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 263 LRDESMHCNFGIDLINQLKLENPQLWTAEFKAEINALFMKAVELEYRYAEDTMPRGVLGL 322

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 323 NASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 382

Query: 121 ELKWD 125
            L WD
Sbjct: 383 ALSWD 387


>gi|148546452|ref|YP_001266554.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           putida F1]
 gi|148510510|gb|ABQ77370.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida F1]
          Length = 415

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW    ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|319764328|ref|YP_004128265.1| ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
           BC]
 gi|330826374|ref|YP_004389677.1| ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
           K601]
 gi|317118889|gb|ADV01378.1| Ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
           BC]
 gi|329311746|gb|AEB86161.1| Ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
           K601]
          Length = 396

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 74/125 (59%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENP LWT  F+ + + +  +A  LE  YA +TMP+G +G+
Sbjct: 272 LRDESMHCNFGIDLINQLKLENPQLWTPAFKDEIKGLFLKAVDLEYRYAEDTMPRGVLGM 331

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGL+ LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 332 NASMFKGYLRYIANRRATQIGLDALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 391

Query: 121 ELKWD 125
            L WD
Sbjct: 392 ALSWD 396


>gi|330880140|gb|EGH14289.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
 gi|330966559|gb|EGH66819.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. actinidiae str. M302091]
          Length = 415

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|229590245|ref|YP_002872364.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           fluorescens SBW25]
 gi|229362111|emb|CAY49013.1| putative ribonucleoside-diphosphate reductase beta chain
           [Pseudomonas fluorescens SBW25]
          Length = 416

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|54297688|ref|YP_124057.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           pneumophila str. Paris]
 gi|53751473|emb|CAH12891.1| hypothetical protein lpp1739 [Legionella pneumophila str. Paris]
          Length = 367

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLWT EF+ +   ++ E   LE  YA +TMP G +G+
Sbjct: 241 LRDESMHMNFGIDVINQIKIENPHLWTPEFKNEIIQLIREGVELEYQYARDTMPHGILGM 300

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRR +QIGL   +   ENPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 301 NAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFFETRVIEYQAGG 360

Query: 121 ELKWD 125
            L WD
Sbjct: 361 TLSWD 365


>gi|300113307|ref|YP_003759882.1| ribonucleoside-diphosphate reductase [Nitrosococcus watsonii C-113]
 gi|299539244|gb|ADJ27561.1| Ribonucleoside-diphosphate reductase [Nitrosococcus watsonii C-113]
          Length = 412

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 85/125 (68%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDES+H+NFGIDVINQIK+ENPHLW+  F+Q++  M+ EA  LE  YAH+TMP+G +GL
Sbjct: 288 MRDESMHMNFGIDVINQIKLENPHLWSDSFKQETLRMIQEAVSLETQYAHDTMPRGVLGL 347

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  E+Y++FIANRRC QIGL   +    NPFPWMSEV+DLKKEKNFFETRVTEYQ G 
Sbjct: 348 NAPMFEEYLKFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 407

Query: 121 ELKWD 125
            L WD
Sbjct: 408 ALSWD 412


>gi|167837963|ref|ZP_02464822.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis MSMB43]
          Length = 303

 Score =  199 bits (506), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 179 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 238

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 239 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 298

Query: 121 ELKWD 125
            L W+
Sbjct: 299 ALSWE 303


>gi|327480258|gb|AEA83568.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           stutzeri DSM 4166]
          Length = 415

 Score =  199 bits (506), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLW  E + ++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDMINQIKIENPHLWNAEMKDEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|254496936|ref|ZP_05109775.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           drancourtii LLAP12]
 gi|254353845|gb|EET12541.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           drancourtii LLAP12]
          Length = 369

 Score =  199 bits (506), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 77/125 (61%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLWT EF+++   ++ +   +E  YA +TMP G +G+
Sbjct: 240 LRDESMHMNFGIDVINQIKIENPHLWTPEFKEEIIQLIKDGVAMEYQYAKDTMPHGILGM 299

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRR +QIGL   +   ENPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 300 NAEMFEEYLHFIANRRLNQIGLPEQYPGAENPFPWMSEMMDLKKEKNFFETRVIEYQAGG 359

Query: 121 ELKWD 125
            L WD
Sbjct: 360 TLSWD 364


>gi|229592166|ref|YP_002874285.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           fluorescens SBW25]
 gi|229364032|emb|CAY51597.1| ribonucleoside-diphosphate reductase beta chain [Pseudomonas
           fluorescens SBW25]
          Length = 416

 Score =  199 bits (506), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|254483523|ref|ZP_05096750.1| ribonucleoside-diphosphate reductase, beta subunit [marine gamma
           proteobacterium HTCC2148]
 gi|214036244|gb|EEB76924.1| ribonucleoside-diphosphate reductase, beta subunit [marine gamma
           proteobacterium HTCC2148]
          Length = 425

 Score =  199 bits (506), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENP+LWT+ FQQ+   M+ E T +EI YA +TMP+G +G+
Sbjct: 301 LRDESMHLNFGIDVINQIKLENPNLWTETFQQEVIQMILEGTEIEIQYARDTMPRGVLGM 360

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRR  Q+GL   F   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 361 NAAIMEEYLHFIANRRLSQLGLPEQFAGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 420

Query: 121 ELKWD 125
            L WD
Sbjct: 421 ALSWD 425


>gi|255318309|ref|ZP_05359544.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           radioresistens SK82]
 gi|262379054|ref|ZP_06072210.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           radioresistens SH164]
 gi|255304621|gb|EET83803.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           radioresistens SK82]
 gi|262298511|gb|EEY86424.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           radioresistens SH164]
          Length = 427

 Score =  198 bits (505), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 79/124 (63%), Positives = 98/124 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEIIQMILEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR +Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NAAMMEEYLKFICNRRLNQLGLPEQFAGVNNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|300309722|ref|YP_003773814.1| transmembrane ribonucleoside reductase small subunit
           [Herbaspirillum seropedicae SmR1]
 gi|300072507|gb|ADJ61906.1| transmembrane ribonucleoside reductase (small chain) protein
           [Herbaspirillum seropedicae SmR1]
          Length = 388

 Score =  198 bits (505), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 78/125 (62%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN +K+ENPHLWT EF+++ +++   A  LE  YA +TMP+G +GL
Sbjct: 264 LRDESMHCNFGIDLINTVKMENPHLWTPEFREEIKSLFLRAVELEYRYAEDTMPRGVLGL 323

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRR  QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 324 NAPMFKSYLRFIANRRAQQIGLDPLFAQEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 383

Query: 121 ELKWD 125
            L W+
Sbjct: 384 ALSWE 388


>gi|256822964|ref|YP_003146927.1| Ribonucleoside-diphosphate reductase [Kangiella koreensis DSM
           16069]
 gi|256796503|gb|ACV27159.1| Ribonucleoside-diphosphate reductase [Kangiella koreensis DSM
           16069]
          Length = 421

 Score =  198 bits (505), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 81/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFG+D+INQIK+ENPHLWT EF+Q+   M+ E T LEI YA +TMP+G +G+
Sbjct: 297 LRDESMHLNFGVDIINQIKLENPHLWTAEFKQEVLQMILEGTQLEIEYARDTMPRGVLGM 356

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFI NRR  Q+GL   FK   NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 357 NAGMMEEYLQFICNRRLAQLGLPEQFKNVSNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 416

Query: 121 ELKWD 125
            L WD
Sbjct: 417 ALSWD 421


>gi|261855609|ref|YP_003262892.1| ribonucleoside-diphosphate reductase [Halothiobacillus neapolitanus
           c2]
 gi|261836078|gb|ACX95845.1| Ribonucleoside-diphosphate reductase [Halothiobacillus neapolitanus
           c2]
          Length = 398

 Score =  198 bits (505), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 88/124 (70%), Positives = 100/124 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDES+H+NFGIDVINQIKIENPHLWT++F+ +   ML EA  LEIAYA +TMP G +GL
Sbjct: 275 MRDESIHMNFGIDVINQIKIENPHLWTEDFKAEVTRMLKEAAELEIAYARDTMPHGLLGL 334

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  C +Y+ FIANRRC+QIGL  LF    NPFPWMSEVIDLKKEKNFFETRVT+YQ G 
Sbjct: 335 NAEMCAEYLHFIANRRCNQIGLAELFPGATNPFPWMSEVIDLKKEKNFFETRVTDYQTGG 394

Query: 121 ELKW 124
            L W
Sbjct: 395 ALNW 398


>gi|254784923|ref|YP_003072351.1| ribonucleotide-diphosphate reductase subunit beta [Teredinibacter
           turnerae T7901]
 gi|237687536|gb|ACR14800.1| ribonucleoside-diphosphate reductase [Teredinibacter turnerae
           T7901]
          Length = 453

 Score =  198 bits (505), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 79/124 (63%), Positives = 99/124 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENPHLWT+ FQQ+ + M+ E T LEI YA +TMP+G +G+
Sbjct: 330 LRDESMHLNFGIDVINQIKLENPHLWTESFQQEVKQMVLEGTELEIGYARDTMPRGVLGM 389

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRR  Q+GL+  +   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 390 NAAIMEEYLHFIANRRLAQLGLKEAYPGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 449

Query: 121 ELKW 124
            L W
Sbjct: 450 ALSW 453


>gi|77165986|ref|YP_344511.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosococcus
           oceani ATCC 19707]
 gi|254436303|ref|ZP_05049809.1| ribonucleoside-diphosphate reductase, beta subunit [Nitrosococcus
           oceani AFC27]
 gi|76884300|gb|ABA58981.1| Ribonucleoside-diphosphate reductase [Nitrosococcus oceani ATCC
           19707]
 gi|207087993|gb|EDZ65266.1| ribonucleoside-diphosphate reductase, beta subunit [Nitrosococcus
           oceani AFC27]
          Length = 412

 Score =  198 bits (504), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 85/125 (68%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDES+H+NFGIDVINQIK+ENPHLW+  F+Q++  M+ EA  LE  YAH+TMP+G +GL
Sbjct: 288 MRDESMHMNFGIDVINQIKLENPHLWSDSFKQETLRMIQEAVSLETQYAHDTMPRGVLGL 347

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  E+Y++FIANRRC QIGL   +    NPFPWMSEV+DLKKEKNFFETRVTEYQ G 
Sbjct: 348 NAPMFEEYLKFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 407

Query: 121 ELKWD 125
            L WD
Sbjct: 408 ALSWD 412


>gi|77460516|ref|YP_350023.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           fluorescens Pf0-1]
 gi|77384519|gb|ABA76032.1| ribonucleoside-diphosphate reductase beta chain [Pseudomonas
           fluorescens Pf0-1]
          Length = 416

 Score =  198 bits (504), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEASQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|325272776|ref|ZP_08139120.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas sp.
           TJI-51]
 gi|324102083|gb|EGB99585.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas sp.
           TJI-51]
          Length = 416

 Score =  198 bits (504), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW    ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|297563527|ref|YP_003682501.1| ribonucleoside-diphosphate reductase [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296847975|gb|ADH69995.1| Ribonucleoside-diphosphate reductase [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 360

 Score =  198 bits (504), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 88/125 (70%), Positives = 102/125 (81%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW++EFQ + R ML EA  LE+AY  ETMP+G +GL
Sbjct: 236 LRDESIHLNFGIDVINQIKIENPHLWSEEFQAEVRQMLTEACELEVAYGRETMPRGVLGL 295

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CE+YM FI +RR  QIGL P+F  TENPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 296 NAELCEKYMHFITDRRAEQIGLAPIFGETENPFPWMSEMMDLQKEKNFFETRVIEYQTGG 355

Query: 121 ELKWD 125
            L WD
Sbjct: 356 GLDWD 360


>gi|170720377|ref|YP_001748065.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           putida W619]
 gi|169758380|gb|ACA71696.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida W619]
          Length = 416

 Score =  198 bits (504), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW    ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|226953559|ref|ZP_03824023.1| ribonucleotide reductase, beta subunit [Acinetobacter sp. ATCC
           27244]
 gi|294649451|ref|ZP_06726876.1| ribonucleotide-diphosphate reductase beta subunit [Acinetobacter
           haemolyticus ATCC 19194]
 gi|226835696|gb|EEH68079.1| ribonucleotide reductase, beta subunit [Acinetobacter sp. ATCC
           27244]
 gi|292824656|gb|EFF83434.1| ribonucleotide-diphosphate reductase beta subunit [Acinetobacter
           haemolyticus ATCC 19194]
          Length = 427

 Score =  197 bits (503), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 78/124 (62%), Positives = 96/124 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT  FQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTATFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NASMMEEYLKFICNRRLAQLGLPEQFAGVTNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|104780527|ref|YP_607025.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           entomophila L48]
 gi|95109514|emb|CAK14215.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           entomophila L48]
          Length = 415

 Score =  197 bits (503), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW    ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|152980709|ref|YP_001354668.1| ribonucleotide-diphosphate reductase subunit beta
           [Janthinobacterium sp. Marseille]
 gi|151280786|gb|ABR89196.1| ribonucleoside-diphosphate reductase beta chain [Janthinobacterium
           sp. Marseille]
          Length = 392

 Score =  197 bits (503), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK+ENPHLWT +F+++ +T+   A  LE  YA +TMP+G +GL
Sbjct: 268 LRDESMHCNFGIDLINTIKLENPHLWTPQFREEIKTLFLRAVELEYRYAEDTMPRGVLGL 327

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRR  QIGLEP+F+  ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 328 NAPMFKGYLRFIANRRAQQIGLEPMFEQEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 387

Query: 121 ELKWD 125
            L W+
Sbjct: 388 ALNWE 392


>gi|148359319|ref|YP_001250526.1| ribonucleoside-diphosphate reductase subunit beta [Legionella
           pneumophila str. Corby]
 gi|296107366|ref|YP_003619066.1| ribonucleoside-diphosphate reductase beta chain [Legionella
           pneumophila 2300/99 Alcoy]
 gi|148281092|gb|ABQ55180.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella
           pneumophila str. Corby]
 gi|295649267|gb|ADG25114.1| ribonucleoside-diphosphate reductase beta chain [Legionella
           pneumophila 2300/99 Alcoy]
 gi|307610475|emb|CBX00047.1| hypothetical protein LPW_18021 [Legionella pneumophila 130b]
          Length = 367

 Score =  197 bits (503), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLWT EF+ +   ++ E   LE  YA +TMP G +G+
Sbjct: 241 LRDESMHMNFGIDVINQIKIENPHLWTPEFKNEMIQLIREGVELEYQYARDTMPHGILGM 300

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRR +QIGL   +   ENPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 301 NAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFFETRVIEYQAGG 360

Query: 121 ELKWD 125
            L WD
Sbjct: 361 TLSWD 365


>gi|262280153|ref|ZP_06057938.1| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter
           calcoaceticus RUH2202]
 gi|262260504|gb|EEY79237.1| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter
           calcoaceticus RUH2202]
          Length = 427

 Score =  197 bits (503), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 78/124 (62%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLW+ EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWSAEFQQEVVQMIVEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|262369327|ref|ZP_06062655.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
           johnsonii SH046]
 gi|262315395|gb|EEY96434.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
           johnsonii SH046]
          Length = 427

 Score =  197 bits (503), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 77/124 (62%), Positives = 96/124 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENP LWT EFQ++   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPSLWTAEFQEEIIQMILEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NAAMMEEYLKFICNRRLAQLGLPEQFAGVNNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|52842002|ref|YP_095801.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|52629113|gb|AAU27854.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
          Length = 381

 Score =  197 bits (503), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLWT EF+ +   ++ E   LE  YA +TMP G +G+
Sbjct: 255 LRDESMHMNFGIDVINQIKIENPHLWTPEFKNEMIQLIREGVELEYQYARDTMPHGILGM 314

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRR +QIGL   +   ENPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 315 NAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFFETRVIEYQAGG 374

Query: 121 ELKWD 125
            L WD
Sbjct: 375 TLSWD 379


>gi|26987912|ref|NP_743337.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           putida KT2440]
 gi|167035231|ref|YP_001670462.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           putida GB-1]
 gi|24982621|gb|AAN66801.1|AE016309_3 ribonucleoside reductase, beta subunit [Pseudomonas putida KT2440]
 gi|166861719|gb|ABZ00127.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida GB-1]
 gi|313497534|gb|ADR58900.1| NrdB [Pseudomonas putida BIRD-1]
          Length = 416

 Score =  197 bits (503), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW    ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|255019430|ref|ZP_05291537.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Acidithiobacillus caldus ATCC 51756]
 gi|254971128|gb|EET28583.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Acidithiobacillus caldus ATCC 51756]
          Length = 345

 Score =  197 bits (502), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 75/125 (60%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT+ FQQ+   ++ +   LE AYA +TMP+G +GL
Sbjct: 220 LRDESMHCNFGIDLINQIKLENPQLWTEGFQQEIVGLIRQGVELECAYADDTMPRGILGL 279

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  ++Y+++I NRR  QIGL+P ++  +NPFPWMSE++DLKKEKNFFE+RVT+YQ G 
Sbjct: 280 NAPMFKEYVRYIGNRRLSQIGLKPQWENVQNPFPWMSEMMDLKKEKNFFESRVTDYQTGG 339

Query: 121 ELKWD 125
            L WD
Sbjct: 340 ALSWD 344


>gi|330504346|ref|YP_004381215.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           mendocina NK-01]
 gi|328918632|gb|AEB59463.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           mendocina NK-01]
          Length = 416

 Score =  197 bits (502), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  + + ++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAQMKDEATQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|146308172|ref|YP_001188637.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           mendocina ymp]
 gi|145576373|gb|ABP85905.1| Ribonucleoside-diphosphate reductase [Pseudomonas mendocina ymp]
          Length = 416

 Score =  197 bits (502), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  + + ++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAQMKDEATQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|146282010|ref|YP_001172163.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           stutzeri A1501]
 gi|145570215|gb|ABP79321.1| ribonucleoside reductase, small chain [Pseudomonas stutzeri A1501]
          Length = 415

 Score =  197 bits (502), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLW  E + ++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDMINQIKIENPHLWDAEMKDEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NASMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|299771426|ref|YP_003733452.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. DR1]
 gi|298701514|gb|ADI92079.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. DR1]
          Length = 427

 Score =  197 bits (502), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 78/124 (62%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLW+ EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWSAEFQQEVVQMIVEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|30250346|ref|NP_842416.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosomonas
           europaea ATCC 19718]
 gi|30181141|emb|CAD86334.1| Ribonucleotide reductase [Nitrosomonas europaea ATCC 19718]
          Length = 382

 Score =  197 bits (502), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 82/125 (65%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGIDVINQIK+ENPHLWT+EF+++   ++ +A  LE  YA +TMP+G +GL
Sbjct: 258 LRDESMHCNFGIDVINQIKLENPHLWTREFREEISALMRKAVELEYRYAEDTMPRGVLGL 317

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  ++Y++FI NRR HQIGL+PLF    NPFPWMSE+IDLKKEKNFFETRV EYQ G 
Sbjct: 318 NAPMFKEYLRFIINRRSHQIGLDPLFPEAGNPFPWMSEMIDLKKEKNFFETRVIEYQTGG 377

Query: 121 ELKWD 125
            L WD
Sbjct: 378 VLSWD 382


>gi|226227154|ref|YP_002761260.1| ribonucleoside-diphosphate reductase beta subunit [Gemmatimonas
           aurantiaca T-27]
 gi|226090345|dbj|BAH38790.1| ribonucleoside-diphosphate reductase beta subunit [Gemmatimonas
           aurantiaca T-27]
          Length = 371

 Score =  197 bits (502), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 89/125 (71%), Positives = 102/125 (81%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENPHLW+  FQ++ R ML EA  LE+AY  +TMP+GF+GL
Sbjct: 247 LRDESIHLNFGIDVINQIKVENPHLWSAAFQEEVRQMLAEACELEVAYGRDTMPRGFLGL 306

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CE YM FI NRRC Q+GL P+F  T+NPFPWMSE IDLKKEKNFFETRV EYQ G 
Sbjct: 307 NAALCETYMHFITNRRCAQLGLAPVFPETDNPFPWMSEAIDLKKEKNFFETRVIEYQNGG 366

Query: 121 ELKWD 125
            LKWD
Sbjct: 367 ALKWD 371


>gi|262376783|ref|ZP_06070011.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           lwoffii SH145]
 gi|262308493|gb|EEY89628.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           lwoffii SH145]
          Length = 427

 Score =  197 bits (502), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 78/124 (62%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENP LWT EFQ++   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPGLWTTEFQEEIIQMILEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FIANRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NAGMMEEYLKFIANRRLAQLGLPEQFAGVNNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|325121074|gb|ADY80597.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 370

 Score =  197 bits (502), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 247 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVVQMIVEGTMLEIEYARDTMPRGVLGM 306

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 307 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 366

Query: 121 ELKW 124
            L W
Sbjct: 367 ALSW 370


>gi|324998522|ref|ZP_08119634.1| ribonucleoside-diphosphate reductase beta chain [Pseudonocardia sp.
           P1]
          Length = 358

 Score =  197 bits (501), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 87/125 (69%), Positives = 103/125 (82%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID INQIKIENPHLWT+EF  + R MLHEA  LE+AYA +TMP+G +GL
Sbjct: 234 LRDESIHLNFGIDCINQIKIENPHLWTEEFAAEIRAMLHEACELEVAYARDTMPRGMLGL 293

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A SCEQY++FI +RR  QIGL PLF   +NPFPWMSE +DL+KEKNFFETRVTEY+ G 
Sbjct: 294 TAESCEQYLRFITDRRAEQIGLAPLFGQADNPFPWMSEAMDLRKEKNFFETRVTEYRTGG 353

Query: 121 ELKWD 125
            L+WD
Sbjct: 354 SLEWD 358


>gi|15596352|ref|NP_249846.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa PAO1]
 gi|107100605|ref|ZP_01364523.1| hypothetical protein PaerPA_01001630 [Pseudomonas aeruginosa PACS2]
 gi|116049087|ref|YP_792111.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|152988648|ref|YP_001349579.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa PA7]
 gi|218892881|ref|YP_002441750.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa LESB58]
 gi|254239525|ref|ZP_04932847.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa 2192]
 gi|296390475|ref|ZP_06879950.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa PAb1]
 gi|313106126|ref|ZP_07792381.1| NrdB, tyrosyl radical-harboring component of class Ia
           ribonucleotide reductase [Pseudomonas aeruginosa 39016]
 gi|9947077|gb|AAG04544.1|AE004545_7 NrdB, tyrosyl radical-harboring component of class Ia
           ribonucleotide reductase [Pseudomonas aeruginosa PAO1]
 gi|115584308|gb|ABJ10323.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126192903|gb|EAZ56966.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa 2192]
 gi|150963806|gb|ABR85831.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa PA7]
 gi|187939552|gb|ACD38699.1| ribonucleoside reductase small chain [Pseudomonas aeruginosa]
 gi|218773109|emb|CAW28921.1| NrdB, tyrosyl radical-harboring component of class Ia
           ribonucleotide reductase [Pseudomonas aeruginosa LESB58]
 gi|310878883|gb|EFQ37477.1| NrdB, tyrosyl radical-harboring component of class Ia
           ribonucleotide reductase [Pseudomonas aeruginosa 39016]
          Length = 415

 Score =  196 bits (500), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  + + ++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAQMKDEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|302525965|ref|ZP_07278307.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. AA4]
 gi|302434860|gb|EFL06676.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. AA4]
          Length = 357

 Score =  196 bits (500), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 86/125 (68%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID INQIKIENPHLWT+EFQ + R ML EA  LE+ YA +TMP+G +GL
Sbjct: 233 LRDESIHLNFGIDCINQIKIENPHLWTEEFQAEVRGMLQEACELEVKYARDTMPRGMLGL 292

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A  CEQYM FI +RR  QIGL P++   ENPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 293 SADLCEQYMHFITDRRAQQIGLPPIYGENENPFPWMSEAMDLKKEKNFFETRVIEYQSGG 352

Query: 121 ELKWD 125
            L WD
Sbjct: 353 ALDWD 357


>gi|160871658|ref|ZP_02061790.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsiella
           grylli]
 gi|159120457|gb|EDP45795.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsiella
           grylli]
          Length = 362

 Score =  196 bits (500), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 77/125 (61%), Positives = 92/125 (73%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENPHLWT EF++    ++ E   LE  YA +T+P+G +GL
Sbjct: 237 LRDESMHLNFGIDVINQIKLENPHLWTPEFKRYVINLIKEGVDLEYQYALDTLPRGILGL 296

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA     Y++FI NRR  QIGL   +    NP PWMSE+IDLKKEKNFFETRVTEYQ G 
Sbjct: 297 NANLMWDYLRFIGNRRFTQIGLAEQYPGVSNPLPWMSEIIDLKKEKNFFETRVTEYQTGG 356

Query: 121 ELKWD 125
            L WD
Sbjct: 357 SLNWD 361


>gi|315122301|ref|YP_004062790.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter solanacearum CLso-ZC1]
 gi|313495703|gb|ADR52302.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter solanacearum CLso-ZC1]
          Length = 372

 Score =  196 bits (500), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 94/125 (75%), Positives = 109/125 (87%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDES+HLNFGID+INQIKIENPHLWT++FQQ+ R ML EA LLE+AY  +TMPK F+G+
Sbjct: 248 MRDESVHLNFGIDMINQIKIENPHLWTEDFQQEVRKMLQEAALLEVAYGKDTMPKPFLGI 307

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CE+YM FI NRRC QIGL+P+F+ TENPFPWMSEVIDL+KEKNFFETRVTEYQ+G 
Sbjct: 308 NANLCEKYMYFITNRRCTQIGLDPVFEKTENPFPWMSEVIDLQKEKNFFETRVTEYQKGT 367

Query: 121 ELKWD 125
            L WD
Sbjct: 368 SLDWD 372


>gi|302877617|ref|YP_003846181.1| Ribonucleoside-diphosphate reductase [Gallionella capsiferriformans
           ES-2]
 gi|302580406|gb|ADL54417.1| Ribonucleoside-diphosphate reductase [Gallionella capsiferriformans
           ES-2]
          Length = 365

 Score =  196 bits (500), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 78/125 (62%), Positives = 102/125 (81%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFG+D+INQIK+ENPHLWT  F+++ R ++ +   LE AYA +TMP+G +GL
Sbjct: 241 LRDESMHLNFGVDLINQIKMENPHLWTAAFREEIRGLMQKGVELEYAYAEDTMPRGILGL 300

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   ++Y++FIANRRC QIG++ L++   NPFPWMSE+IDLKKEKNFFE+RVTEYQ G 
Sbjct: 301 NATMFKEYLRFIANRRCQQIGVDILYQGATNPFPWMSEMIDLKKEKNFFESRVTEYQTGG 360

Query: 121 ELKWD 125
            L WD
Sbjct: 361 TLSWD 365


>gi|256377255|ref|YP_003100915.1| ribonucleoside-diphosphate reductase [Actinosynnema mirum DSM
           43827]
 gi|255921558|gb|ACU37069.1| Ribonucleoside-diphosphate reductase [Actinosynnema mirum DSM
           43827]
          Length = 358

 Score =  196 bits (500), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 91/125 (72%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID INQIKIENPHLW + FQ + RTML EA  LEIAY  +TMP G +GL
Sbjct: 234 LRDESIHLNFGIDAINQIKIENPHLWGEAFQAEVRTMLAEACELEIAYGRDTMPNGLLGL 293

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CEQYM+FI NRRC Q+GLEP+F  TENPFPWMSE +DLKKEKNFFETRVTEY  G 
Sbjct: 294 NAELCEQYMRFITNRRCAQLGLEPVFAATENPFPWMSEAVDLKKEKNFFETRVTEYASGG 353

Query: 121 ELKWD 125
            L WD
Sbjct: 354 TLDWD 358


>gi|212212091|ref|YP_002303027.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii CbuG_Q212]
 gi|212010501|gb|ACJ17882.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
           CbuG_Q212]
          Length = 401

 Score =  196 bits (499), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 81/125 (64%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLW K FQ++   M+ E   LE  YA +TMP+G +GL
Sbjct: 276 LRDESMHVNFGIDVINQIKIENPHLWNKNFQKEVIEMILEGVELEYQYAKDTMPRGILGL 335

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+Q+IANRRC QIGL   F   +N FPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 336 NANMFKDYLQYIANRRCAQIGLPEQFPGAKNTFPWMSEMMDLKKEKNFFETRVIEYQAGG 395

Query: 121 ELKWD 125
            LKWD
Sbjct: 396 TLKWD 400


>gi|110833571|ref|YP_692430.1| ribonucleotide-diphosphate reductase subunit beta [Alcanivorax
           borkumensis SK2]
 gi|110646682|emb|CAL16158.1| ribonucleoside reductase, beta subunit [Alcanivorax borkumensis
           SK2]
          Length = 430

 Score =  196 bits (499), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIK+ENPHLW  + + K+  M+ E T LEI YA +TMP+G +G+
Sbjct: 306 LRDESMHVNFGIDVINQIKLENPHLWDAQMRDKATQMILEGTELEIQYARDTMPRGVLGM 365

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFIANRR  Q+GL   FK   NPFPWMSE++DL+KEKNFFETRVTEYQ G 
Sbjct: 366 NAAMMEEYLQFIANRRLAQLGLPEQFKGVNNPFPWMSEIMDLRKEKNFFETRVTEYQVGG 425

Query: 121 ELKWD 125
            L W+
Sbjct: 426 ALSWE 430


>gi|270156779|ref|ZP_06185436.1| ribonucleotide-diphosphate reductase beta subunit [Legionella
           longbeachae D-4968]
 gi|289164772|ref|YP_003454910.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella
           longbeachae NSW150]
 gi|269988804|gb|EEZ95058.1| ribonucleotide-diphosphate reductase beta subunit [Legionella
           longbeachae D-4968]
 gi|288857945|emb|CBJ11805.1| putative ribonucleoside-diphosphate reductase, beta subunit
           [Legionella longbeachae NSW150]
          Length = 366

 Score =  196 bits (499), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 77/125 (61%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLWT EF+++   ++ +   LE  YA +TMP+G +G+
Sbjct: 240 LRDESMHMNFGIDVINQIKIENPHLWTSEFKEEIIQLIRQGVDLEYQYAKDTMPQGILGM 299

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRR  QIGL   +    NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 300 NAEMFEEYLHFIANRRLTQIGLAEQYPGAVNPFPWMSEMMDLKKEKNFFETRVIEYQAGG 359

Query: 121 ELKWD 125
            L WD
Sbjct: 360 TLSWD 364


>gi|92119123|ref|YP_578852.1| ribonucleotide-diphosphate reductase subunit beta [Nitrobacter
           hamburgensis X14]
 gi|91802017|gb|ABE64392.1| Ribonucleoside-diphosphate reductase [Nitrobacter hamburgensis X14]
          Length = 416

 Score =  196 bits (499), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 88/125 (70%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW+K FQ++ R ML  A  LE AY  +TMP+GF+GL
Sbjct: 292 LRDESIHLNFGIDVINQIKIENPHLWSKPFQEEVRAMLKNAAELEAAYGRDTMPRGFLGL 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CEQYM  IANRRC Q+GL P+F   +NPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAALCEQYMHVIANRRCAQLGLAPVFAEADNPFPWMSEAMDLKKEKNFFETRVIEYQNGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALAWD 416


>gi|289677030|ref|ZP_06497920.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. syringae FF5]
          Length = 243

 Score =  196 bits (499), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 119 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 178

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 179 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 238

Query: 121 ELKWD 125
            L WD
Sbjct: 239 ALSWD 243


>gi|254780136|ref|YP_003064549.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254781006|ref|YP_003065419.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254039813|gb|ACT56609.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040683|gb|ACT57479.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 125

 Score =  196 bits (499), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 125/125 (100%), Positives = 125/125 (100%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL
Sbjct: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA
Sbjct: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120

Query: 121 ELKWD 125
           ELKWD
Sbjct: 121 ELKWD 125


>gi|300784783|ref|YP_003765074.1| ribonucleoside-diphosphate reductase beta chain [Amycolatopsis
           mediterranei U32]
 gi|299794297|gb|ADJ44672.1| ribonucleoside-diphosphate reductase beta chain [Amycolatopsis
           mediterranei U32]
          Length = 357

 Score =  196 bits (498), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 87/125 (69%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID INQIKIENPHLWT+EFQ + R ML EA  LE+ YA +TMP+G +GL
Sbjct: 233 LRDESIHLNFGIDCINQIKIENPHLWTEEFQAEVRGMLKEACELEVKYARDTMPRGMLGL 292

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A  CEQYM F+ +RR  QIGL P+F  TENPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 293 SAQLCEQYMHFVTDRRAQQIGLAPIFGETENPFPWMSEAMDLKKEKNFFETRVIEYQSGG 352

Query: 121 ELKWD 125
            L WD
Sbjct: 353 ALDWD 357


>gi|29654845|ref|NP_820537.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii RSA 493]
 gi|154705923|ref|YP_001423853.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii Dugway 5J108-111]
 gi|161831080|ref|YP_001597389.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii RSA 331]
 gi|29542113|gb|AAO91051.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
           RSA 493]
 gi|154355209|gb|ABS76671.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
           Dugway 5J108-111]
 gi|161762947|gb|ABX78589.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii RSA 331]
          Length = 401

 Score =  196 bits (498), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 81/125 (64%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLW K FQ++   M+ E   LE  YA +TMP+G +GL
Sbjct: 276 LRDESMHVNFGIDVINQIKIENPHLWNKNFQKEVIEMILEGVELEYQYAKDTMPRGILGL 335

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+Q+IANRRC QIGL   F   +N FPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 336 NANMFKDYLQYIANRRCAQIGLPEQFPGAKNTFPWMSEMMDLKKEKNFFETRVIEYQAGG 395

Query: 121 ELKWD 125
            LKWD
Sbjct: 396 TLKWD 400


>gi|145588393|ref|YP_001154990.1| ribonucleotide-diphosphate reductase subunit beta [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145046799|gb|ABP33426.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 394

 Score =  196 bits (498), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 75/125 (60%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT  F+ + +++  +A  LE  YA +TMP+G +GL
Sbjct: 270 LRDESMHCNFGIDLINQIKLENPQLWTSAFKDEIKSIFEKAVELEYRYAEDTMPRGVLGL 329

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y+++I NRRC QIGL+ +F   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 330 NAPMFKGYLRYICNRRCLQIGLDAMFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 389

Query: 121 ELKWD 125
            L W+
Sbjct: 390 ALSWE 394


>gi|299134880|ref|ZP_07028072.1| Ribonucleoside-diphosphate reductase [Afipia sp. 1NLS2]
 gi|298590690|gb|EFI50893.1| Ribonucleoside-diphosphate reductase [Afipia sp. 1NLS2]
          Length = 373

 Score =  196 bits (498), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 89/125 (71%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+EN HLWTK FQ+  R M+ +A  LE AY  +TMP+GF+GL
Sbjct: 249 LRDESIHLNFGIDVINQIKLENQHLWTKAFQEDVRGMIRDAAELEAAYGRDTMPRGFLGL 308

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CEQYM FIANRRC QIGL P+F  TENPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 309 NAALCEQYMHFIANRRCAQIGLTPVFPETENPFPWMSEAMDLKKEKNFFETRVIEYQNGG 368

Query: 121 ELKWD 125
            L W+
Sbjct: 369 ALSWE 373


>gi|126640804|ref|YP_001083788.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii ATCC 17978]
 gi|322506921|gb|ADX02375.1| nrdB [Acinetobacter baumannii 1656-2]
 gi|323516789|gb|ADX91170.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii TCDC-AB0715]
          Length = 361

 Score =  196 bits (498), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 238 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 297

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 298 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 357

Query: 121 ELKW 124
            L W
Sbjct: 358 ALSW 361


>gi|114321252|ref|YP_742935.1| ribonucleotide-diphosphate reductase subunit beta [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114227646|gb|ABI57445.1| Ribonucleoside-diphosphate reductase [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 354

 Score =  196 bits (498), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 83/125 (66%), Positives = 102/125 (81%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQI+ ENP LWT +F+Q+  TML EA  LE+AYA +TMP+G +GL
Sbjct: 230 LRDESIHLNFGIDVINQIRHENPELWTNDFEQEVLTMLREAVELEVAYARDTMPRGMLGL 289

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CE+YM FI NRRC Q+GL+ L+    NPFPWMSEV+DL+KEKNFFETRVT+Y+ G 
Sbjct: 290 NADMCEEYMHFITNRRCAQLGLKELYPGATNPFPWMSEVMDLQKEKNFFETRVTDYRTGG 349

Query: 121 ELKWD 125
            L+WD
Sbjct: 350 ALQWD 354


>gi|153208286|ref|ZP_01946665.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii 'MSU Goat Q177']
 gi|165919229|ref|ZP_02219315.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii RSA 334]
 gi|212219268|ref|YP_002306055.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii CbuK_Q154]
 gi|120576070|gb|EAX32694.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii 'MSU Goat Q177']
 gi|165917090|gb|EDR35694.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii RSA 334]
 gi|212013530|gb|ACJ20910.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
           CbuK_Q154]
          Length = 401

 Score =  196 bits (498), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 81/125 (64%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLW K FQ++   M+ E   LE  YA +TMP+G +GL
Sbjct: 276 LRDESMHVNFGIDVINQIKIENPHLWNKNFQKEVIEMILEGVELEYQYAKDTMPRGILGL 335

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+Q+IANRRC QIGL   F   +N FPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 336 NANMFKDYLQYIANRRCAQIGLPEQFPGAKNTFPWMSEMMDLKKEKNFFETRVIEYQAGG 395

Query: 121 ELKWD 125
            LKWD
Sbjct: 396 TLKWD 400


>gi|114332419|ref|YP_748641.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosomonas
           eutropha C91]
 gi|114309433|gb|ABI60676.1| Ribonucleoside-diphosphate reductase [Nitrosomonas eutropha C91]
          Length = 377

 Score =  196 bits (498), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 81/125 (64%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGIDVINQIK+ENPHLWT+EF+++   ++ +A  LE  YA +TMP+G +GL
Sbjct: 253 LRDESMHCNFGIDVINQIKLENPHLWTREFREEISALMRKAVELEYRYAEDTMPRGVLGL 312

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  ++Y++FI NRR HQIGL+PLF    NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 313 NAPMFKEYLRFIINRRSHQIGLDPLFPEAGNPFPWMSEMVDLKKEKNFFETRVIEYQTGG 372

Query: 121 ELKWD 125
            L WD
Sbjct: 373 VLSWD 377


>gi|198284354|ref|YP_002220675.1| ribonucleotide-diphosphate reductase subunit beta
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|198248875|gb|ACH84468.1| Ribonucleoside-diphosphate reductase [Acidithiobacillus
           ferrooxidans ATCC 53993]
          Length = 374

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 73/125 (58%), Positives = 94/125 (75%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+ NQIK+ENP LWT+ FQQ+   ++     LE AYA +TMP+G +GL
Sbjct: 250 LRDESMHCNFGIDMANQIKVENPQLWTEAFQQEIIDLIRRGVELECAYADDTMPRGVLGL 309

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP   +Y+++I NRR  Q+GL   +   +NPFPWMSE++DLKKEKNFFETRVTEYQ G 
Sbjct: 310 NAPVFREYVKYIGNRRLVQLGLPQQYPGVQNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 369

Query: 121 ELKWD 125
            L W+
Sbjct: 370 ALSWE 374


>gi|121608466|ref|YP_996273.1| ribonucleotide-diphosphate reductase subunit beta
           [Verminephrobacter eiseniae EF01-2]
 gi|121553106|gb|ABM57255.1| Ribonucleoside-diphosphate reductase [Verminephrobacter eiseniae
           EF01-2]
          Length = 399

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 75/125 (60%), Positives = 92/125 (73%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT  F+ +   +  +A  LE  YA +TMP G +G+
Sbjct: 275 LRDESMHCNFGIDLINQIKLENPLLWTTAFKAEIEALFLQAVELEYRYAEDTMPHGVLGM 334

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF    NPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 335 NASMFKGYLRYIANRRATQIGLETLFPQETNPFPWMSEMIDLKKERNFFETRVIEYQSGG 394

Query: 121 ELKWD 125
            L WD
Sbjct: 395 ALCWD 399


>gi|119713586|gb|ABL97637.1| ribonucleotide-diphosphate reductase beta subunit [uncultured
           marine bacterium EB0_39H12]
          Length = 412

 Score =  195 bits (496), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIK+ENPHLW ++ + ++  M+ E T LEI YA +TMP+G +G+
Sbjct: 288 LRDESMHLNFGIDMINQIKLENPHLWDEQMRHEAAQMILEGTELEIQYARDTMPRGILGM 347

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFIANRR  QIGLE  F+   NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 348 NAGMMEEYLQFIANRRLVQIGLEEEFEGASNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 407

Query: 121 ELKWD 125
            L WD
Sbjct: 408 ALTWD 412


>gi|218665361|ref|YP_002427016.1| ribonucleoside-diphosphate reductase, beta subunit
           [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|218517574|gb|ACK78160.1| ribonucleoside-diphosphate reductase, beta subunit
           [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 380

 Score =  195 bits (496), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 73/125 (58%), Positives = 94/125 (75%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+ NQIK+ENP LWT+ FQQ+   ++     LE AYA +TMP+G +GL
Sbjct: 256 LRDESMHCNFGIDMANQIKVENPQLWTEAFQQEIIDLIRRGVELECAYADDTMPRGVLGL 315

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP   +Y+++I NRR  Q+GL   +   +NPFPWMSE++DLKKEKNFFETRVTEYQ G 
Sbjct: 316 NAPVFREYVKYIGNRRLVQLGLPQQYPGVQNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 375

Query: 121 ELKWD 125
            L W+
Sbjct: 376 ALSWE 380


>gi|294339031|emb|CAZ87378.1| putative Ribonucleoside-diphosphate reductase (ribonucleoside
           diphosphate reductase, beta subunit) [Thiomonas sp. 3As]
          Length = 410

 Score =  195 bits (496), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 77/125 (61%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID++NQIK+ENPHLWT EF+++   + H+A  LE  YA +TMP+G +GL
Sbjct: 286 LRDESMHTNFGIDLVNQIKLENPHLWTPEFKRELTGLFHQAVELEYRYAEDTMPRGVLGL 345

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FIANRR  QIGL+ +F   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 346 NASMFKGYLRFIANRRAVQIGLDAIFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 405

Query: 121 ELKWD 125
            L W+
Sbjct: 406 ALSWE 410


>gi|75677068|ref|YP_319489.1| ribonucleotide-diphosphate reductase subunit beta [Nitrobacter
           winogradskyi Nb-255]
 gi|74421938|gb|ABA06137.1| ribonucleotide reductase [Nitrobacter winogradskyi Nb-255]
          Length = 391

 Score =  194 bits (495), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 86/125 (68%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLW+K FQ++ R ML  A  LE AY  +TMP+GF+GL
Sbjct: 267 LRDESIHLNFGIDIINQIKIENPHLWSKPFQEEVRAMLKNAADLEAAYGRDTMPRGFLGL 326

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CE YM  IANRRC Q+GL P+F   +NPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 327 NATLCETYMHVIANRRCAQLGLAPVFPDADNPFPWMSEAMDLKKEKNFFETRVIEYQNGG 386

Query: 121 ELKWD 125
            L WD
Sbjct: 387 ALAWD 391


>gi|296135014|ref|YP_003642256.1| Ribonucleoside-diphosphate reductase [Thiomonas intermedia K12]
 gi|295795136|gb|ADG29926.1| Ribonucleoside-diphosphate reductase [Thiomonas intermedia K12]
          Length = 402

 Score =  194 bits (495), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 77/125 (61%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID++NQIK+ENPHLWT EF+++   + H+A  LE  YA +TMP+G +GL
Sbjct: 278 LRDESMHTNFGIDLVNQIKLENPHLWTPEFKRELTGLFHQAVELEYRYAEDTMPRGVLGL 337

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FIANRR  QIGL+ +F   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 338 NASMFKGYLRFIANRRAVQIGLDAIFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 397

Query: 121 ELKWD 125
            L W+
Sbjct: 398 ALSWE 402


>gi|284032753|ref|YP_003382684.1| Ribonucleoside-diphosphate reductase [Kribbella flavida DSM 17836]
 gi|283812046|gb|ADB33885.1| Ribonucleoside-diphosphate reductase [Kribbella flavida DSM 17836]
          Length = 354

 Score =  194 bits (494), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 85/125 (68%), Positives = 94/125 (75%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHLNFGID INQIK+ENPHLWT  FQ + R ML EA  LE+AY   T+P G +GL
Sbjct: 230 LRDESLHLNFGIDCINQIKLENPHLWTPAFQAEVRRMLTEACELEVAYGRATLPNGMLGL 289

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A  CEQYM FI +RR  Q+GL PLF  T NPF WMSEV+DLKKEKNFFETRV EYQ G 
Sbjct: 290 TAELCEQYMHFITDRRAEQLGLAPLFGETRNPFGWMSEVMDLKKEKNFFETRVIEYQSGG 349

Query: 121 ELKWD 125
            L WD
Sbjct: 350 GLSWD 354


>gi|254429337|ref|ZP_05043044.1| ribonucleoside-diphosphate reductase, beta subunit [Alcanivorax sp.
           DG881]
 gi|196195506|gb|EDX90465.1| ribonucleoside-diphosphate reductase, beta subunit [Alcanivorax sp.
           DG881]
          Length = 355

 Score =  193 bits (491), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIK+ENPHLW  + + K+  M+ E   LEI YA +TMP+G +G+
Sbjct: 231 LRDESMHVNFGIDVINQIKLENPHLWDAQMRDKATQMILEGAELEIQYARDTMPRGVLGM 290

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFIANRR  Q+GL   FK   NPFPWMSE++DL+KEKNFFETRVTEYQ G 
Sbjct: 291 NAAMMEEYLQFIANRRLAQLGLPEQFKGVNNPFPWMSEIMDLRKEKNFFETRVTEYQVGG 350

Query: 121 ELKWD 125
            L W+
Sbjct: 351 ALSWE 355


>gi|257055668|ref|YP_003133500.1| ribonucleotide reductase, beta subunit [Saccharomonospora viridis
           DSM 43017]
 gi|256585540|gb|ACU96673.1| ribonucleotide reductase, beta subunit [Saccharomonospora viridis
           DSM 43017]
          Length = 349

 Score =  193 bits (491), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 87/125 (69%), Positives = 103/125 (82%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFG+D INQIK ENPHLWT EFQQ+ R ML EA  LE+AYAH+TMP+  +GL
Sbjct: 225 LRDESIHLNFGVDCINQIKAENPHLWTPEFQQQVRDMLVEACELEVAYAHDTMPRPMLGL 284

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A  CEQYM FI +RR  Q+GL+P+F   ENPFPWMSEVIDL+KEKNFFETRVT+Y+ GA
Sbjct: 285 SAELCEQYMHFITDRRAAQLGLDPVFGERENPFPWMSEVIDLRKEKNFFETRVTDYRSGA 344

Query: 121 ELKWD 125
            L WD
Sbjct: 345 ALAWD 349


>gi|312962626|ref|ZP_07777115.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           fluorescens WH6]
 gi|311283001|gb|EFQ61593.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           fluorescens WH6]
          Length = 136

 Score =  192 bits (490), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 12  LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 71

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 72  NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 131

Query: 121 ELKWD 125
            L WD
Sbjct: 132 ALSWD 136


>gi|119478322|ref|ZP_01618353.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
           proteobacterium HTCC2143]
 gi|119448662|gb|EAW29907.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
           proteobacterium HTCC2143]
          Length = 422

 Score =  192 bits (489), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 76/125 (60%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENP LW+++FQQ+   M+ E T LEI YA ++MP+G +G+
Sbjct: 298 LRDESMHLNFGIDVINQIKLENPQLWSEKFQQEIIQMILEGTQLEIEYARDSMPRGVLGM 357

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFI+NRR +Q+GL   ++  +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 358 NAAMMEEYLQFISNRRLNQLGLPEQYQGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 417

Query: 121 ELKWD 125
            L W+
Sbjct: 418 ALNWE 422


>gi|85714830|ref|ZP_01045816.1| ribonucleotide reductase [Nitrobacter sp. Nb-311A]
 gi|85698316|gb|EAQ36187.1| ribonucleotide reductase [Nitrobacter sp. Nb-311A]
          Length = 389

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 89/125 (71%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLWTK FQ + R ML  A  LE AY  +TMP+GF+GL
Sbjct: 265 LRDESIHLNFGIDVINQIKIENPHLWTKTFQDEVRAMLKNAAELEAAYGRDTMPRGFLGL 324

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CE YM  IANRRC Q+GL P+F  T+NPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 325 NAALCETYMHVIANRRCAQLGLAPVFAETDNPFPWMSEAMDLKKEKNFFETRVIEYQNGG 384

Query: 121 ELKWD 125
            L WD
Sbjct: 385 ALAWD 389


>gi|90425007|ref|YP_533377.1| ribonucleotide-diphosphate reductase subunit beta [Rhodopseudomonas
           palustris BisB18]
 gi|90107021|gb|ABD89058.1| Ribonucleoside-diphosphate reductase [Rhodopseudomonas palustris
           BisB18]
          Length = 386

 Score =  191 bits (487), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 89/125 (71%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENP LWT  FQ++ R ML EA  LE AY+ +TMP+GF+GL
Sbjct: 262 LRDESIHLNFGIDVINQIKIENPKLWTAGFQEELRGMLQEAAELEAAYSRDTMPRGFLGL 321

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CEQYM FI NRRC Q+GL P+F   ENPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 322 NAALCEQYMHFITNRRCAQLGLAPIFAEVENPFPWMSETMDLKKEKNFFETRVIEYQNGG 381

Query: 121 ELKWD 125
            L WD
Sbjct: 382 ALTWD 386


>gi|115525181|ref|YP_782092.1| ribonucleotide reductase [Rhodopseudomonas palustris BisA53]
 gi|115519128|gb|ABJ07112.1| ribonucleotide reductase [Rhodopseudomonas palustris BisA53]
          Length = 223

 Score =  191 bits (486), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 88/125 (70%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENP LWT  FQ++ R ML EA  LE AY  +TMP+GF GL
Sbjct: 99  LRDESIHLNFGIDIINQIKIENPELWTAGFQEELRGMLREAAELEAAYCRDTMPRGFFGL 158

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CEQYM FI NRRC Q+GL P+F   ENPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 159 NAALCEQYMHFITNRRCAQLGLAPIFAEVENPFPWMSETMDLKKEKNFFETRVIEYQNGG 218

Query: 121 ELKWD 125
            L WD
Sbjct: 219 ALTWD 223


>gi|300022335|ref|YP_003754946.1| ribonucleoside-diphosphate reductase [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299524156|gb|ADJ22625.1| Ribonucleoside-diphosphate reductase [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 374

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 85/125 (68%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK EN HLW+K FQ + R ML +A  LE AY  +TMP G +GL
Sbjct: 250 LRDESIHLNFGIDVINQIKAENAHLWSKAFQDEVRGMLRDAAQLEAAYGRDTMPTGLLGL 309

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N    EQYM+FIANRRC Q+GL P+FK  ENPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 310 NPGLTEQYMEFIANRRCAQLGLTPVFKDRENPFPWMSEAMDLKKEKNFFETRVIEYQNGG 369

Query: 121 ELKWD 125
            L W+
Sbjct: 370 ALSWE 374


>gi|192291019|ref|YP_001991624.1| ribonucleotide-diphosphate reductase subunit beta [Rhodopseudomonas
           palustris TIE-1]
 gi|192284768|gb|ACF01149.1| Ribonucleoside-diphosphate reductase [Rhodopseudomonas palustris
           TIE-1]
          Length = 373

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 84/125 (67%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+EN  +WT  FQ   R M+H+A  LE AY  +TMP G +GL
Sbjct: 249 LRDESIHLNFGIDVINQIKLENAAVWTASFQDDIRGMIHDAAELEAAYGRDTMPHGLLGL 308

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CE YM FIANRRC Q+GL P+F  T+NPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 309 NAALCESYMHFIANRRCVQLGLRPVFAETDNPFPWMSETMDLKKEKNFFETRVIEYQNGG 368

Query: 121 ELKWD 125
            L WD
Sbjct: 369 ALDWD 373


>gi|171463021|ref|YP_001797134.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171192559|gb|ACB43520.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 394

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 73/125 (58%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LW   F+ + +++  +A  LE  YA +TMP+G +GL
Sbjct: 270 LRDESMHCNFGIDLINQIKLENPQLWISAFKDEIKSIFEKAVELEYRYAEDTMPRGVLGL 329

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  +  +++I NRRC QIGL+ +F   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 330 NAPMFKGCLRYICNRRCLQIGLDAMFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 389

Query: 121 ELKWD 125
            L W+
Sbjct: 390 ALSWE 394


>gi|166154172|ref|YP_001654290.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 434/Bu]
 gi|166155047|ref|YP_001653302.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis L2b/UCH-1/proctitis]
 gi|301335416|ref|ZP_07223660.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis L2tet1]
 gi|165930160|emb|CAP03644.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis 434/Bu]
 gi|165931035|emb|CAP06598.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis L2b/UCH-1/proctitis]
          Length = 346

 Score =  186 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 72/124 (58%), Positives = 92/124 (74%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +WT E QQ+   ++  A  LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGL 283

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A     Y+Q IA+RR  +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRVTEYQ  A
Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVTEYQHAA 342

Query: 121 ELKW 124
            L W
Sbjct: 343 SLTW 346


>gi|282890382|ref|ZP_06298910.1| hypothetical protein pah_c016o114 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499764|gb|EFB42055.1| hypothetical protein pah_c016o114 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 350

 Score =  185 bits (471), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 74/124 (59%), Positives = 92/124 (74%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+IN IK ENP +WT EF+ +   M+ EA  LEI YA + +P G +GL
Sbjct: 228 LRDESIHLNFGIDLINTIKEENPEVWTPEFKDQIIDMVKEAVELEIQYAADCLPNGILGL 287

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA     Y+ +IA+RR  +IGL+P +  T NPFPWMSEV+DL KEKNFFETRVT+YQ GA
Sbjct: 288 NAALFRDYVGYIADRRLERIGLKPQYN-TANPFPWMSEVMDLDKEKNFFETRVTQYQSGA 346

Query: 121 ELKW 124
            L W
Sbjct: 347 ALVW 350


>gi|325110864|ref|YP_004271932.1| ribonucleotide reductase [Planctomyces brasiliensis DSM 5305]
 gi|324971132|gb|ADY61910.1| ribonucleotide reductase [Planctomyces brasiliensis DSM 5305]
          Length = 353

 Score =  184 bits (469), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 72/125 (57%), Positives = 91/125 (72%), Gaps = 1/125 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE+ HLNFGID+IN IK ENP +WT++FQQ+   ++ EA  LEI YA + +P+G +GL
Sbjct: 230 LRDETTHLNFGIDLINGIKHENPDIWTEKFQQEIIDLVKEAVELEIDYARDCLPRGVLGL 289

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N      Y+Q IA+RR  +IGL  L+  + NPFPWMSE +DL KEKNFFETRVTEYQ G 
Sbjct: 290 NGNLFRDYVQHIADRRLERIGLPTLYN-SSNPFPWMSETMDLAKEKNFFETRVTEYQTGG 348

Query: 121 ELKWD 125
            L WD
Sbjct: 349 TLSWD 353


>gi|268316001|ref|YP_003289720.1| Ribonucleoside-diphosphate reductase [Rhodothermus marinus DSM
           4252]
 gi|262333535|gb|ACY47332.1| Ribonucleoside-diphosphate reductase [Rhodothermus marinus DSM
           4252]
          Length = 347

 Score =  184 bits (468), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 75/125 (60%), Positives = 99/125 (79%), Gaps = 1/125 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP LWT EFQ++ + ++ EA  LE+AYA++ +P+G +GL
Sbjct: 223 LRDETIHLNFGIDLINGIKAENPELWTPEFQREVQQLIEEAVELEVAYAYDCLPRGVLGL 282

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            AP   +Y+Q+IA+RR  +IGL+  +  ++NPFPWMSE IDL KEKNFFETRVTEYQQ A
Sbjct: 283 TAPMFREYVQYIADRRLERIGLKARY-GSKNPFPWMSETIDLLKEKNFFETRVTEYQQAA 341

Query: 121 ELKWD 125
            L WD
Sbjct: 342 ALSWD 346


>gi|112489977|pdb|2ANI|A Chain A, Crystal Structure Of The F127y Mutant Of Ribonucleotide
           Reductase R2 From Chlamydia Trachomatis
          Length = 346

 Score =  184 bits (467), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 71/124 (57%), Positives = 91/124 (73%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +WT E QQ+   ++  A  LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGL 283

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A     Y+Q IA+RR  +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRV EYQ  A
Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVIEYQHAA 342

Query: 121 ELKW 124
            L W
Sbjct: 343 SLTW 346


>gi|15605563|ref|NP_220349.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis D/UW-3/CX]
 gi|255311668|ref|ZP_05354238.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 6276]
 gi|255317969|ref|ZP_05359215.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 6276s]
 gi|14195107|sp|O84835|RIR2_CHLTR RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|51247460|pdb|1SYY|A Chain A, Crystal Structure Of The R2 Subunit Of Ribonucleotide
           Reductase From Chlamydia Trachomatis
 gi|3329298|gb|AAC68425.1| Ribonucleoside Reductase, Small Chain [Chlamydia trachomatis
           D/UW-3/CX]
 gi|296436383|gb|ADH18557.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis G/9768]
 gi|296437314|gb|ADH19484.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis G/11222]
 gi|296438242|gb|ADH20403.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis G/11074]
 gi|297140743|gb|ADH97501.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis G/9301]
 gi|297748957|gb|ADI51503.1| Ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis D-EC]
 gi|297749837|gb|ADI52515.1| Ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis D-LC]
          Length = 346

 Score =  184 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 71/124 (57%), Positives = 91/124 (73%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +WT E QQ+   ++  A  LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGL 283

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A     Y+Q IA+RR  +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRV EYQ  A
Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVIEYQHAA 342

Query: 121 ELKW 124
            L W
Sbjct: 343 SLTW 346


>gi|33242353|ref|NP_877294.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           pneumoniae TW-183]
 gi|33236864|gb|AAP98951.1| ribonucleoside reductase small chain [Chlamydophila pneumoniae
           TW-183]
          Length = 365

 Score =  184 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 66/124 (53%), Positives = 91/124 (73%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +WT E Q++   ++ +A  LEI YA + +P+G +GL
Sbjct: 243 LRDETIHLNFGIDLINGIKEENPEVWTTELQEEIVALIEKAVELEIEYAKDCLPRGILGL 302

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            +     Y++ IA+RR  +IGL+P++ ++ NPFPWMSE +DL KEKNFFETRVTEYQ   
Sbjct: 303 RSSMFIDYVRHIADRRLERIGLKPIY-HSRNPFPWMSETMDLNKEKNFFETRVTEYQTAG 361

Query: 121 ELKW 124
            L W
Sbjct: 362 NLSW 365


>gi|88812072|ref|ZP_01127324.1| ribonucleotide-diphosphate reductase beta subunit [Nitrococcus
           mobilis Nb-231]
 gi|88790576|gb|EAR21691.1| ribonucleotide-diphosphate reductase beta subunit [Nitrococcus
           mobilis Nb-231]
          Length = 370

 Score =  184 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 78/125 (62%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK ENPHLWT EFQ  ++  + E+  LE+ YA +T+P+G +GL
Sbjct: 246 LRDESIHLNFGIDVINQIKQENPHLWTAEFQATAQRTILESMALEVDYARDTLPRGVLGL 305

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  QIGL   F   ENP PWMSE++DLKKEKNFFETRVTEY+ G 
Sbjct: 306 NAAMIEEYLRFITNRRLAQIGLTEAFPGAENPLPWMSELVDLKKEKNFFETRVTEYRTGG 365

Query: 121 ELKWD 125
            L W+
Sbjct: 366 ALSWE 370


>gi|329943118|ref|ZP_08291892.1| ribonucleotide reductase, small chain family protein [Chlamydophila
           psittaci Cal10]
 gi|332287701|ref|YP_004422602.1| ribonucleotide reductase subunit beta [Chlamydophila psittaci 6BC]
 gi|325507260|gb|ADZ18898.1| ribonucleotide reductase subunit beta [Chlamydophila psittaci 6BC]
 gi|328814665|gb|EGF84655.1| ribonucleotide reductase, small chain family protein [Chlamydophila
           psittaci Cal10]
 gi|328914953|gb|AEB55786.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           psittaci 6BC]
          Length = 346

 Score =  184 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 68/124 (54%), Positives = 91/124 (73%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +WT E Q +   ++ +A  LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEVWTPELQSEIIALIEKAVDLEIEYARDCLPRGILGL 283

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A     Y++ IA+RR  +IGL+P++ +++NPFPWMSE IDL KEKNFFETRV EYQ  A
Sbjct: 284 KASMFIDYVRHIADRRLERIGLKPIY-HSKNPFPWMSETIDLNKEKNFFETRVIEYQTAA 342

Query: 121 ELKW 124
            L W
Sbjct: 343 NLSW 346


>gi|62185356|ref|YP_220141.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           abortus S26/3]
 gi|62148423|emb|CAH64191.1| putative ibonucleoside reductase small subunit [Chlamydophila
           abortus S26/3]
          Length = 349

 Score =  184 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 68/124 (54%), Positives = 91/124 (73%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +WT E Q +   ++ +A  LEI YA + +P+G +GL
Sbjct: 227 LRDETIHLNFGIDLINGIKEENPEVWTPELQSEIIALIEKAVDLEIEYARDCLPRGILGL 286

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A     Y++ IA+RR  +IGL+P++ +++NPFPWMSE IDL KEKNFFETRV EYQ  A
Sbjct: 287 KASMFIDYVRHIADRRLERIGLKPIY-HSKNPFPWMSETIDLNKEKNFFETRVIEYQTAA 345

Query: 121 ELKW 124
            L W
Sbjct: 346 NLSW 349


>gi|15834835|ref|NP_296594.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           muridarum Nigg]
 gi|270285001|ref|ZP_06194395.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           muridarum Nigg]
 gi|270289024|ref|ZP_06195326.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           muridarum Weiss]
 gi|301336399|ref|ZP_07224601.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           muridarum MopnTet14]
 gi|14195147|sp|Q9PL92|RIR2_CHLMU RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|7190253|gb|AAF39087.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydia
           muridarum Nigg]
          Length = 346

 Score =  184 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 72/124 (58%), Positives = 92/124 (74%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFG+D+IN IK ENP +WT E QQ+   M+  A  LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGVDLINGIKEENPEIWTTELQQEIIEMIQRAVDLEIDYARDCLPRGILGL 283

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A     Y+Q IA+RR  +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRVTEYQ  A
Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVTEYQHAA 342

Query: 121 ELKW 124
            L W
Sbjct: 343 SLTW 346


>gi|29840533|ref|NP_829639.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           caviae GPIC]
 gi|29834882|gb|AAP05517.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           caviae GPIC]
          Length = 346

 Score =  183 bits (466), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 67/124 (54%), Positives = 92/124 (74%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +W++E Q +   ++ +A  LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEVWSQELQDEIIALIQKAVDLEIEYAKDCLPRGILGL 283

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            +     Y++ IA+RR  +IGL+P++ Y++NPFPWMSE IDL KEKNFFETRVTEYQ   
Sbjct: 284 KSSMFIDYVRHIADRRLERIGLKPIY-YSKNPFPWMSETIDLNKEKNFFETRVTEYQTSG 342

Query: 121 ELKW 124
            L W
Sbjct: 343 NLSW 346


>gi|15618893|ref|NP_225179.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           pneumoniae CWL029]
 gi|15836516|ref|NP_301040.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           pneumoniae J138]
 gi|16752043|ref|NP_445409.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           pneumoniae AR39]
 gi|14195165|sp|Q9Z6S4|RIR2_CHLPN RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|4377313|gb|AAD19122.1| Ribonucleoside Reductase, Small Chain [Chlamydophila pneumoniae
           CWL029]
 gi|7189783|gb|AAF38660.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           pneumoniae AR39]
 gi|8979358|dbj|BAA99192.1| ribonucleoside reductase, small chain [Chlamydophila pneumoniae
           J138]
 gi|269302786|gb|ACZ32886.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           pneumoniae LPCoLN]
          Length = 346

 Score =  183 bits (466), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 66/124 (53%), Positives = 91/124 (73%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +WT E Q++   ++ +A  LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEVWTTELQEEIVALIEKAVELEIEYAKDCLPRGILGL 283

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            +     Y++ IA+RR  +IGL+P++ ++ NPFPWMSE +DL KEKNFFETRVTEYQ   
Sbjct: 284 RSSMFIDYVRHIADRRLERIGLKPIY-HSRNPFPWMSETMDLNKEKNFFETRVTEYQTAG 342

Query: 121 ELKW 124
            L W
Sbjct: 343 NLSW 346


>gi|313848275|emb|CBY17276.1| putative ibonucleoside reductase small subunit [Chlamydophila
           psittaci RD1]
          Length = 349

 Score =  183 bits (466), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 68/124 (54%), Positives = 91/124 (73%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +WT E Q +   ++ +A  LEI YA + +P+G +GL
Sbjct: 227 LRDETIHLNFGIDLINGIKEENPEVWTPELQSEIIALIEKAVDLEIEYARDCLPRGILGL 286

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A     Y++ IA+RR  +IGL+P++ +++NPFPWMSE IDL KEKNFFETRV EYQ  A
Sbjct: 287 KASMFIDYVRHIADRRLERIGLKPIY-HSKNPFPWMSETIDLNKEKNFFETRVIEYQTAA 345

Query: 121 ELKW 124
            L W
Sbjct: 346 NLSW 349


>gi|76789573|ref|YP_328659.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis A/HAR-13]
 gi|237803260|ref|YP_002888454.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis B/Jali20/OT]
 gi|237805181|ref|YP_002889335.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis B/TZ1A828/OT]
 gi|255349232|ref|ZP_05381239.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 70]
 gi|255503769|ref|ZP_05382159.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 70s]
 gi|255507450|ref|ZP_05383089.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis D(s)2923]
 gi|76168103|gb|AAX51111.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis A/HAR-13]
 gi|231273481|emb|CAX10397.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis B/TZ1A828/OT]
 gi|231274494|emb|CAX11290.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis B/Jali20/OT]
 gi|289525874|emb|CBJ15356.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis Sweden2]
 gi|296435459|gb|ADH17637.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis E/150]
 gi|296439176|gb|ADH21329.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis E/11023]
          Length = 346

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 71/124 (57%), Positives = 91/124 (73%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +WT E QQ+   ++  A  LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPGIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGL 283

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A     Y+Q IA+RR  +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRV EYQ  A
Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVIEYQHAA 342

Query: 121 ELKW 124
            L W
Sbjct: 343 SLTW 346


>gi|330443801|ref|YP_004376787.1| ribonucleoside-diphosphate reductase subunit beta [Chlamydophila
           pecorum E58]
 gi|328806911|gb|AEB41084.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           pecorum E58]
          Length = 346

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 68/124 (54%), Positives = 92/124 (74%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +W+KE Q++   ++  A  LEI YA + +PKG +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEVWSKELQEEIIALIETAVGLEIDYAKDCLPKGILGL 283

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            +     Y++ IA+RR  +IGL+P++  ++NPFPWMSE +DL KEKNFFETRVTEYQ  A
Sbjct: 284 KSSMFIDYVRHIADRRLERIGLKPIYN-SKNPFPWMSETMDLNKEKNFFETRVTEYQTAA 342

Query: 121 ELKW 124
            L W
Sbjct: 343 SLSW 346


>gi|89898045|ref|YP_515155.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           felis Fe/C-56]
 gi|89331417|dbj|BAE81010.1| ribonucleoside-diphosphate reductase beta chain [Chlamydophila
           felis Fe/C-56]
          Length = 349

 Score =  181 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 66/124 (53%), Positives = 92/124 (74%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +W+++ Q +   ++ +A  LEI YA + +P+G +GL
Sbjct: 227 LRDETIHLNFGIDLINGIKEENPEVWSQQLQDEIVDLIQKAVDLEIEYARDCLPRGILGL 286

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            +     Y++ IA+RR  +IGL+P++  ++NPFPWMSE IDL KEKNFFETRVTEYQ  A
Sbjct: 287 RSSMFIDYVRHIADRRLERIGLKPIYN-SKNPFPWMSETIDLNKEKNFFETRVTEYQTAA 345

Query: 121 ELKW 124
            L W
Sbjct: 346 NLNW 349


>gi|298243909|ref|ZP_06967716.1| Ribonucleoside-diphosphate reductase [Ktedonobacter racemifer DSM
           44963]
 gi|297556963|gb|EFH90827.1| Ribonucleoside-diphosphate reductase [Ktedonobacter racemifer DSM
           44963]
          Length = 361

 Score =  179 bits (456), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 72/125 (57%), Positives = 94/125 (75%), Gaps = 1/125 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP LWT EFQ     ++  A  LEIAYA++ +P G +GL
Sbjct: 238 LRDETIHLNFGIDLINGIKAENPELWTTEFQAHIYDLIKRAVELEIAYAYDCLPNGILGL 297

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA S   Y+Q +A+RR  +IGL P+F ++ +PFPWMSE +DL KEKNFFETRVTEYQ  +
Sbjct: 298 NAESFRSYVQHVADRRLERIGLAPIF-HSSHPFPWMSETMDLSKEKNFFETRVTEYQAAS 356

Query: 121 ELKWD 125
            L+W+
Sbjct: 357 TLEWE 361


>gi|189219089|ref|YP_001939730.1| ribonucleotide-diphosphate reductase subunit beta
           [Methylacidiphilum infernorum V4]
 gi|189185947|gb|ACD83132.1| Ribonucleotide reductase, beta subunit [Methylacidiphilum
           infernorum V4]
          Length = 361

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 68/124 (54%), Positives = 94/124 (75%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN I+ ENP +WT  FQ++   M+ E+  LE AYA + +P+G +GL
Sbjct: 239 LRDETIHLNFGIDLINGIREENPEIWTAGFQKEIEEMIDESVRLEYAYARDCLPRGILGL 298

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N+   + Y+++IA+RR  +IG +  +  ++NPFPWMSEV+DL KEKNFFETRVTEYQ GA
Sbjct: 299 NSALFKDYVEYIADRRLERIGFKAKY-GSKNPFPWMSEVMDLVKEKNFFETRVTEYQSGA 357

Query: 121 ELKW 124
            L W
Sbjct: 358 VLNW 361


>gi|283779060|ref|YP_003369815.1| ribonucleoside-diphosphate reductase [Pirellula staleyi DSM 6068]
 gi|283437513|gb|ADB15955.1| Ribonucleoside-diphosphate reductase [Pirellula staleyi DSM 6068]
          Length = 357

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 69/125 (55%), Positives = 90/125 (72%), Gaps = 1/125 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN ++ ENP +WT +FQ++   ++ EA  LE+AYA + +P+G VGL
Sbjct: 234 LRDETIHLNFGIDLINGVRAENPGIWTADFQERVIKLVREAVELEVAYAWDCLPRGIVGL 293

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N      Y+Q IA+RR  +IGL   +    NPFPWMSE +DL KEKNFFETRVTEYQ  A
Sbjct: 294 NGELFRDYVQHIADRRLERIGLPTQYGSA-NPFPWMSETMDLGKEKNFFETRVTEYQSAA 352

Query: 121 ELKWD 125
            L WD
Sbjct: 353 SLAWD 357


>gi|149173739|ref|ZP_01852368.1| ribonucleotide-diphosphate reductase beta subunit [Planctomyces
           maris DSM 8797]
 gi|148847269|gb|EDL61603.1| ribonucleotide-diphosphate reductase beta subunit [Planctomyces
           maris DSM 8797]
          Length = 359

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 71/125 (56%), Positives = 85/125 (68%), Gaps = 1/125 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP LWT EFQQ     +  A  LEI YA + +P G +GL
Sbjct: 236 LRDETIHLNFGIDLINGIKQENPDLWTPEFQQLIIDRMKYAAELEIEYAKDCLPTGILGL 295

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N     +Y+Q IA+RR  +IGL   +    NPFPWMSE +DL KEKNFFETRVTEYQ   
Sbjct: 296 NGELFREYVQHIADRRLERIGLPAQYGSA-NPFPWMSETMDLSKEKNFFETRVTEYQSSG 354

Query: 121 ELKWD 125
            L WD
Sbjct: 355 SLNWD 359


>gi|159899093|ref|YP_001545340.1| ribonucleotide-diphosphate reductase subunit beta [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159892132|gb|ABX05212.1| Ribonucleoside-diphosphate reductase [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 342

 Score =  177 bits (450), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 69/125 (55%), Positives = 92/125 (73%), Gaps = 1/125 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFG+D+IN IK ENP +WT EFQ +   ++ ++  LE  YA E +P+G +GL
Sbjct: 219 LRDETIHLNFGVDLINGIKAENPAIWTNEFQAEIVQLIRQSVELEAQYAAECLPRGVMGL 278

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A     Y+Q+IA+RR  +IGL   +  ++NPFPWMSE IDL KEKNFFETRVTEYQ  A
Sbjct: 279 HAAMFRDYVQYIADRRLQRIGLAIQY-GSQNPFPWMSETIDLTKEKNFFETRVTEYQSAA 337

Query: 121 ELKWD 125
            L+WD
Sbjct: 338 SLEWD 342


>gi|297621807|ref|YP_003709944.1| ribonucleoside-diphosphate reductase beta subunit [Waddlia
           chondrophila WSU 86-1044]
 gi|297377108|gb|ADI38938.1| ribonucleoside-diphosphate reductase beta subunit [Waddlia
           chondrophila WSU 86-1044]
          Length = 344

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 69/125 (55%), Positives = 92/125 (73%), Gaps = 1/125 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +W ++   +   ++ +A  LEIAYA E +P G +GL
Sbjct: 221 LRDETIHLNFGIDLINGIKAENPEIWNEDLTDEINGLVQQAVELEIAYAKECLPHGVLGL 280

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    +Y+Q++A+RR  +IGL  ++K + NPFPWMSE +DL KEKNFFETRVTEYQ  A
Sbjct: 281 NAGLFVEYVQYVADRRLERIGLSAIYK-SSNPFPWMSETMDLTKEKNFFETRVTEYQSAA 339

Query: 121 ELKWD 125
            L WD
Sbjct: 340 VLSWD 344


>gi|269839640|ref|YP_003324332.1| ribonucleoside-diphosphate reductase [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269791370|gb|ACZ43510.1| Ribonucleoside-diphosphate reductase [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 353

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 69/125 (55%), Positives = 89/125 (71%), Gaps = 1/125 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP  WT+E ++    M+ +A   EIAYA E +P G +GL
Sbjct: 230 LRDETVHLNFGIDLINTIKEENPEAWTEELRRDLVGMIRQAVEYEIAYARECLPNGVLGL 289

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    +Y+Q+IA+RR  +I L   ++ + NPFPWMSE +DL KEKNFFETRVTEYQ   
Sbjct: 290 NADLFREYVQYIADRRLERIELPVQYR-SRNPFPWMSETMDLPKEKNFFETRVTEYQNAG 348

Query: 121 ELKWD 125
            L WD
Sbjct: 349 TLVWD 353


>gi|15791173|ref|NP_280997.1| ribonucleotide-diphosphate reductase subunit beta [Halobacterium
           sp. NRC-1]
 gi|169236929|ref|YP_001690129.1| ribonucleotide-diphosphate reductase subunit beta [Halobacterium
           salinarum R1]
 gi|10581791|gb|AAG20477.1| ribonucleoside reductase small chain [Halobacterium sp. NRC-1]
 gi|167727995|emb|CAP14783.1| ribonucleoside-diphosphate reductase beta subunit [Halobacterium
           salinarum R1]
          Length = 331

 Score =  174 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 58/125 (46%), Positives = 89/125 (71%), Gaps = 1/125 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDESLHLNFG+D+INQI+ E+P +WT +F+ +  +++ +A  LE  YA +  P   +G+
Sbjct: 208 MRDESLHLNFGVDLINQIRDEHPDVWTADFEAEVNSLMRDAVDLEQLYARDACPDDLLGM 267

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           ++     Y++++A+RR  Q+ ++P++  T+NPFPWM+E +DL  E NFFE  V+EYQQG 
Sbjct: 268 SSEQFADYVEYVADRRFQQLRMDPVY-GTDNPFPWMTEQVDLNTETNFFERNVSEYQQGG 326

Query: 121 ELKWD 125
            L WD
Sbjct: 327 SLDWD 331


>gi|257053403|ref|YP_003131236.1| ribonucleotide-diphosphate reductase subunit beta [Halorhabdus
           utahensis DSM 12940]
 gi|256692166|gb|ACV12503.1| Ribonucleoside-diphosphate reductase [Halorhabdus utahensis DSM
           12940]
          Length = 330

 Score =  170 bits (432), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 64/124 (51%), Positives = 86/124 (69%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDESLH+ FG+D+I+QI+ ENP +WT EF  +   ++ EA  LE  YA E  P+  +G+
Sbjct: 208 MRDESLHVGFGVDLIDQIRTENPGVWTDEFDSEVIDLIKEAVELEQIYAREACPEEILGM 267

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +      Y+++IA+RR  Q+ L   +  TENPFPWMSE +DL KEKNFFET+VTEYQ G 
Sbjct: 268 SGSQFADYVEYIADRRLDQLDLPEQY-GTENPFPWMSEQVDLNKEKNFFETQVTEYQSGG 326

Query: 121 ELKW 124
            L+W
Sbjct: 327 SLEW 330


>gi|325181522|emb|CCA15972.1| ribonucleosidediphosphate reductase small chain put [Albugo
           laibachii Nc14]
          Length = 1611

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 67/121 (55%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +++  + P             ++ +A ++E  +  +++P   +G+N
Sbjct: 264 RDEGLHCDFACLMYSKLVNKLPE-------ASIHAIISDAVVIEQEFVRDSLPVELIGMN 316

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R  H +G+  L+ +T NPF WM  +I L+ + NFFE RV EY +   
Sbjct: 317 SSLMGQYIEFVADRLLHALGVSKLY-HTSNPFDWMD-MISLQGKTNFFEKRVGEYAKSGT 374

Query: 122 L 122
           +
Sbjct: 375 I 375


>gi|316971821|gb|EFV55552.1| ribonucleotide reductase R2 subunit [Trichinella spiralis]
          Length = 366

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 37/123 (30%), Positives = 67/123 (54%), Gaps = 9/123 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K        K  + + R ++ EA  +E  +  + +P   +G+N
Sbjct: 241 RDEGLHCDFACLLYSHLKK-------KPTEDRVRQIITEAVSIEQEFLTDALPVRLIGMN 293

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++++A+R   ++G   ++  +ENPF +M E+I L+ + NFFE RV EYQ+   
Sbjct: 294 CVLMSQYIEYVADRLLVELGCSKVYN-SENPFDFM-EMISLEGKTNFFEKRVGEYQKAGV 351

Query: 122 LKW 124
           +  
Sbjct: 352 MAD 354


>gi|159465291|ref|XP_001690856.1| ribonucleoside-diphosphate reductase small subunit [Chlamydomonas
           reinhardtii]
 gi|158279542|gb|EDP05302.1| ribonucleoside-diphosphate reductase small subunit [Chlamydomonas
           reinhardtii]
          Length = 493

 Score =  169 bits (430), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +++   ++ EA  LE  +  E +    +G+N
Sbjct: 360 RDEGLHCDFACCLYS-------HLKNRLSRERVLQIVDEAVQLEDEFCTEALSCELLGMN 412

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G E  +  T NPF WM E+I L+ + NFFE RV EYQ+   
Sbjct: 413 ADLMRQYIRFVADRLLVSLGYEKHYN-TRNPFDWM-EMISLQGKANFFERRVGEYQRAGV 470

Query: 122 L 122
           +
Sbjct: 471 M 471


>gi|284043177|ref|YP_003393517.1| ribonucleoside-diphosphate reductase [Conexibacter woesei DSM
           14684]
 gi|283947398|gb|ADB50142.1| Ribonucleoside-diphosphate reductase [Conexibacter woesei DSM
           14684]
          Length = 364

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 54/122 (44%), Positives = 81/122 (66%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES H+     ++ ++  ENP +WT EF+ + R ++ EA  LE  +  + +P   VGL
Sbjct: 235 LRDESNHIELFRRLLRELVAENPEIWTAEFRDELRELMREAVALEQRFIDDCLPVEGVGL 294

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    QY+ +IA+RR   +GLEPL    ENP PW++E++D++KE+NFFE RVTEYQ+ +
Sbjct: 295 NADEFAQYIDYIADRRLEGVGLEPLKPGVENPLPWLAELMDVRKEQNFFEGRVTEYQKAS 354

Query: 121 EL 122
            L
Sbjct: 355 AL 356


>gi|313117005|ref|YP_004038129.1| ribonucleotide reductase, beta subunit [Halogeometricum borinquense
           DSM 11551]
 gi|312294957|gb|ADQ68993.1| ribonucleotide reductase, beta subunit [Halogeometricum borinquense
           DSM 11551]
          Length = 330

 Score =  169 bits (428), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/124 (50%), Positives = 85/124 (68%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDESLH+ FG+D+INQI+ ENP  WT EF  + R ++ +A  LE  YA E  P   +G+
Sbjct: 208 MRDESLHVGFGVDLINQIRAENPDAWTDEFGAEVRDLIEKAVDLEQIYAREACPDDVLGM 267

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +     +Y++ +A+RR  Q+ L+  +  T+NPFPWMSE +DL KEKNFFET+VTEYQ G 
Sbjct: 268 SPDQFAEYVEHVADRRLGQLDLDASY-GTDNPFPWMSEAVDLNKEKNFFETQVTEYQSGG 326

Query: 121 ELKW 124
            L W
Sbjct: 327 SLDW 330


>gi|1710401|sp|P49730|RIR2_TOBAC RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleoside-diphosphate reductase R2
           subunit; AltName: Full=Ribonucleotide reductase small
           subunit
 gi|1044912|emb|CAA63194.1| ribonucleotide reductase R2 [Nicotiana tabacum]
          Length = 329

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 69/122 (56%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++       TK  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 200 RDEGLHCDFACLLYSLLR-------TKLTEERVKGIVADAVEIEREFVCDALPCALVGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                +Y++F+A+R    +G + L+   +NPF WM E+I L+ + NFFE RV EYQ+ + 
Sbjct: 253 GDLMSKYIEFVADRLLDALGYDKLYN-AQNPFDWM-ELISLQGKTNFFEKRVGEYQKASV 310

Query: 122 LK 123
           + 
Sbjct: 311 MS 312


>gi|291220709|ref|XP_002730368.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
           [Saccoglossus kowalevskii]
          Length = 402

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K  QQ+   ++ +A  +E  +  + +P   +G+N
Sbjct: 277 RDEGLHCDFACLMFS-------HLTNKPSQQRIIEIIRDAVKIEQEFLTDALPVSLIGMN 329

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R    +G   ++   ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 330 KDLMKQYIEFVADRLLLDLGCNKIYN-KENPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 387

Query: 122 LK 123
           + 
Sbjct: 388 MS 389


>gi|322368525|ref|ZP_08043093.1| ribonucleotide-diphosphate reductase subunit beta [Haladaptatus
           paucihalophilus DX253]
 gi|320551809|gb|EFW93455.1| ribonucleotide-diphosphate reductase subunit beta [Haladaptatus
           paucihalophilus DX253]
          Length = 330

 Score =  167 bits (423), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 62/124 (50%), Positives = 85/124 (68%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH+ FG+D+IN+I+ ENP+ WT  F  +   ++  A  LE  YA+E  P   +G+
Sbjct: 208 LRDESLHVGFGVDLINEIRAENPNAWTDAFGDEVTDLITNAVELEKIYAYEACPDEILGM 267

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A    +Y++ IA+RR  Q+ L+  +  TENPFPWMSE +DL KEKNFFET+VTEYQ G 
Sbjct: 268 SAAQFAEYVEHIADRRLAQLDLDEQY-GTENPFPWMSEQVDLNKEKNFFETQVTEYQSGG 326

Query: 121 ELKW 124
            L W
Sbjct: 327 SLDW 330


>gi|28393533|gb|AAO42187.1| putative ribonucleoside-diphosphate reductase small chain
           [Arabidopsis thaliana]
          Length = 243

 Score =  167 bits (423), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++       TK  + + + ++ +A  +E  +  + +    VG+N
Sbjct: 111 RDEGLHCDFACLIYSLLR-------TKFDEDRLKAIVCDAVEIEREFVCDALSCALVGMN 163

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G   ++  T NPF WM E+I L+ + NFFE RV EYQ+ + 
Sbjct: 164 RELMSQYIEFVADRLLAALGCGKVYGVT-NPFDWM-ELISLQGKTNFFEKRVGEYQKASV 221

Query: 122 LK 123
           + 
Sbjct: 222 MS 223


>gi|297668213|ref|XP_002812343.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Pongo abelii]
          Length = 449

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 324 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 376

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 377 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 434

Query: 122 LK 123
           + 
Sbjct: 435 MS 436


>gi|260064013|ref|NP_001159403.1| ribonucleoside-diphosphate reductase subunit M2 isoform 1 [Homo
           sapiens]
          Length = 449

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 324 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 376

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 377 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 434

Query: 122 LK 123
           + 
Sbjct: 435 MS 436


>gi|119621373|gb|EAX00968.1| hCG23833, isoform CRA_b [Homo sapiens]
 gi|119621374|gb|EAX00969.1| hCG23833, isoform CRA_b [Homo sapiens]
          Length = 449

 Score =  167 bits (423), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 324 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 376

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 377 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 434

Query: 122 LK 123
           + 
Sbjct: 435 MS 436


>gi|291412327|ref|XP_002722439.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Oryctolagus
           cuniculus]
          Length = 400

 Score =  166 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 275 RDEGLHCDFACLMFK-------HLVHKPSEQRVQEIIVNAVRIEQEFLTEALPVKLIGMN 327

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 328 CALMKQYIEFVADRLLLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 385

Query: 122 LK 123
           + 
Sbjct: 386 MS 387


>gi|126303832|ref|XP_001381111.1| PREDICTED: similar to hCG23833, [Monodelphis domestica]
          Length = 493

 Score =  166 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  ++K + ++  A  +E  +  E +P   +G+N
Sbjct: 368 RDEGLHCDFACLMFK-------HLVHKPSEEKVKEIIINAVRIEQEFLTEALPVKLIGMN 420

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 421 CTLMKQYIEFVADRLMLELGFSKIFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 478

Query: 122 LK 123
           + 
Sbjct: 479 MS 480


>gi|300709535|ref|YP_003735349.1| ribonucleotide-diphosphate reductase subunit beta [Halalkalicoccus
           jeotgali B3]
 gi|299123218|gb|ADJ13557.1| ribonucleotide-diphosphate reductase subunit beta [Halalkalicoccus
           jeotgali B3]
          Length = 330

 Score =  166 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 62/124 (50%), Positives = 87/124 (70%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDESLHLNFG+D+IN ++ EN  +WT  F+ +   +L EA  LE  YA E  P+  +G+
Sbjct: 208 MRDESLHLNFGVDLINTVREENSGIWTDVFEAEIEGLLREAVELERTYAREACPEEVLGM 267

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                 +Y++++A+RR  Q+G+EP++  T+NPFPWM+E +DL KEKNFFET V EYQ G 
Sbjct: 268 GPAQFAEYVEYVADRRLDQLGMEPVYD-TDNPFPWMAEQVDLNKEKNFFETNVAEYQSGG 326

Query: 121 ELKW 124
            L+W
Sbjct: 327 SLEW 330


>gi|289177074|ref|NP_001165948.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 2 [Homo
           sapiens]
          Length = 423

 Score =  166 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 298 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 350

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F   ENPF +M E I L+ + NFFE RV+EYQ+ A 
Sbjct: 351 CILMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 408

Query: 122 L 122
           +
Sbjct: 409 M 409


>gi|297805560|ref|XP_002870664.1| ribonucleoside-diphosphate reductase [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316500|gb|EFH46923.1| ribonucleoside-diphosphate reductase [Arabidopsis lyrata subsp.
           lyrata]
          Length = 333

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 69/122 (56%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++       TK  +++ ++++ +A  +E  +  + +P   VG+N
Sbjct: 201 RDEGLHCDFACLIYSLLR-------TKLDEERLKSIVCDAVEIEREFVCDALPCALVGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G   ++  + NPF WM E+I L+ + NFFE RV EYQ+ + 
Sbjct: 254 RELMSQYIEFVADRLLTALGCGKVYGVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKASV 311

Query: 122 LK 123
           + 
Sbjct: 312 MS 313


>gi|219126374|ref|XP_002183434.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405190|gb|EEC45134.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 296

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 9/124 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + ++++ + P         +   ++ +A  +E  +  + +P   +G+N
Sbjct: 172 RDEGLHCDFACLLYSKLQNQLP-------VARIVEIITDAVTIEQEFVQDALPVELIGMN 224

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    +Y++F A+R    +G    +K   NPF WM E+I L+ + NFFE RV EY +   
Sbjct: 225 STLMCRYIEFCADRLLVALGCPKHYKAV-NPFDWM-EMISLQGKTNFFEKRVGEYAKSGV 282

Query: 122 LKWD 125
            + D
Sbjct: 283 GEKD 286


>gi|241166485|ref|XP_002409876.1| ribonucleotide reductase, beta subunit, putative [Ixodes
           scapularis]
 gi|215494664|gb|EEC04305.1| ribonucleotide reductase, beta subunit, putative [Ixodes
           scapularis]
          Length = 376

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 39/121 (32%), Positives = 69/121 (57%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K  Q + R ++ +A ++E  +  + +P   +G+N
Sbjct: 251 RDEGLHTDFACLMFS-------HLVNKPSQARVRQIICDAVVIEQEFLTDALPVALIGMN 303

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               ++Y++F+A+R   ++G E ++  +ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 304 CELMKRYIEFVADRLLVELGCEKVYN-SENPFDFM-EHISLEGKTNFFEKRVGEYQKAGV 361

Query: 122 L 122
           +
Sbjct: 362 M 362


>gi|189501948|ref|YP_001957665.1| hypothetical protein Aasi_0535 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497389|gb|ACE05936.1| hypothetical protein Aasi_0535 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 355

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++ +A  +E  +  + +P   +G+N
Sbjct: 226 RDEGLHCDFACLLYAN------HLQNKLPEERVREIITDAVAIEKEFVTDALPVKLIGMN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R   ++G   ++  T NPF +M E+I L+ + NFFE RV EYQ+   
Sbjct: 280 ADLMSQYIEFVADRLLLELGCSKVYNAT-NPFDFM-EMISLQGKTNFFEKRVGEYQKAGV 337

Query: 122 LK 123
           +K
Sbjct: 338 MK 339


>gi|224055741|ref|XP_002298630.1| predicted protein [Populus trichocarpa]
 gi|222845888|gb|EEE83435.1| predicted protein [Populus trichocarpa]
          Length = 329

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ EA  +E  +  +++P   VG+N
Sbjct: 200 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKEAVDIEREFVVDSLPCALVGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EYQ+ + 
Sbjct: 253 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFFEKRVGEYQKASV 310

Query: 122 LK 123
           + 
Sbjct: 311 MS 312


>gi|929959|gb|AAA74020.1| ribonuleotide reductase small subunit [Urechis caupo]
          Length = 399

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K  Q++   ++ +A  +E ++  E +P   +G+N
Sbjct: 271 RDEGLHCDFACLMFS-------HLKNKPSQERVYDIIRDAVRIEQSFLTEALPVNLIGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R   ++G   ++   ENPF +M   I L+ + NFFE RV EYQ+   
Sbjct: 324 CKLMAQYIEFVADRLLLELGCPKIWN-VENPFDFMD-NISLEGKTNFFEKRVGEYQKMGV 381

Query: 122 LK 123
           + 
Sbjct: 382 MS 383


>gi|52077136|dbj|BAD46182.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
 gi|52077275|dbj|BAD46317.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
 gi|186920364|gb|ACC95435.1| ribonucleotide diphosphate reductase small subunit 1 [Oryza sativa
           Japonica Group]
          Length = 339

 Score =  165 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  + + R ++ +A  +E  +  + +P   VG+N
Sbjct: 209 RDEGLHCDFACLLYDLLRG-------KLDEARVREIVADAVDIEREFVCDALPVALVGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G + ++    NPF WM E+I L+ + NFFE RV +YQ+ + 
Sbjct: 262 GDLMSQYIEFVADRLLMALGCKKMYNVA-NPFDWM-ELISLQGKTNFFEKRVGDYQKASV 319

Query: 122 LK 123
           + 
Sbjct: 320 MS 321


>gi|224129040|ref|XP_002328875.1| predicted protein [Populus trichocarpa]
 gi|222839305|gb|EEE77642.1| predicted protein [Populus trichocarpa]
          Length = 329

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 200 RDEGLHCDFACLLYSLLRK-------KLSEEQVKGIVKDAVDIEREFVVDALPCALVGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EYQ+ + 
Sbjct: 253 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFFEKRVGEYQKASV 310

Query: 122 LK 123
           + 
Sbjct: 311 MS 312


>gi|332247268|ref|XP_003272775.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           isoform 1 [Nomascus leucogenys]
          Length = 434

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 309 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 361

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 362 CILMKQYIEFVADRLMLELGFGKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 419

Query: 122 LK 123
           + 
Sbjct: 420 MS 421


>gi|156545974|ref|XP_001606963.1| PREDICTED: similar to ENSANGP00000013211 [Nasonia vitripennis]
          Length = 388

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 9/123 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  K  +++  +++ +A  +E  +  + +P   +G+N
Sbjct: 261 RDEGLHCDFACLMFK-------HIVQKPSEERVISIIKDAVTIEQEFLTDALPVEMIGMN 313

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R   ++G   ++  +ENPF +M E I L+ + NFFE +V EYQ+   
Sbjct: 314 CRLMCQYIEFVADRLLGELGCPKVYN-SENPFDFM-EHISLEGKTNFFEKKVGEYQKWGV 371

Query: 122 LKW 124
           ++ 
Sbjct: 372 MQD 374


>gi|312889900|ref|ZP_07749444.1| Ribonucleoside-diphosphate reductase [Mucilaginibacter paludis DSM
           18603]
 gi|311297432|gb|EFQ74557.1| Ribonucleoside-diphosphate reductase [Mucilaginibacter paludis DSM
           18603]
          Length = 343

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 38/124 (30%), Positives = 67/124 (54%), Gaps = 9/124 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H  F   + +        L  K  ++   T++ +A  +E  +  + +P   +G+N
Sbjct: 217 RDEGMHCEFACLLYSM-------LSNKLSKEAVTTIIADAVEIEKEFVTDALPVNLIGMN 269

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R   ++G + L+ +  NPF +M E+I L+ + NFFE RV +YQ+   
Sbjct: 270 AKLMSQYIEFVADRWLQELGYDKLY-HATNPFDFM-EMISLQGKTNFFEKRVGDYQKSGV 327

Query: 122 LKWD 125
           L  D
Sbjct: 328 LNND 331


>gi|298713498|emb|CBJ27053.1| Ribonucleoside-diphosphate reductase small chain [Ectocarpus
           siliculosus]
          Length = 504

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 9/118 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +          L  K  ++    ++ EA  +E ++    +P   +G+N
Sbjct: 374 RDEGLHCDFACQLF-------ASLENKPSRETVMAIVREAVEVEKSFICGALPCSLIGMN 426

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           A    QY++F+A+R    +G    +  T+NPF WM  +I L+ + NFFE RV EYQ+ 
Sbjct: 427 AGVMSQYIEFVADRLLGSLGYGKSY-GTQNPFDWMD-LISLQGKTNFFEKRVGEYQKA 482


>gi|125554800|gb|EAZ00406.1| hypothetical protein OsI_22421 [Oryza sativa Indica Group]
          Length = 244

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  + + R ++ +A  +E  +  + +P   VG+N
Sbjct: 114 RDEGLHCDFACLLYDLLRG-------KLDEARVREIVADAVDIEREFVCDALPVALVGMN 166

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G + ++    NPF WM E+I L+ + NFFE RV +YQ+ + 
Sbjct: 167 GDLMSQYIEFVADRLLMALGCKKMYNVA-NPFDWM-ELISLQGKTNFFEKRVGDYQKASV 224

Query: 122 LK 123
           + 
Sbjct: 225 MS 226


>gi|224000239|ref|XP_002289792.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975000|gb|EED93329.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 335

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 73/121 (60%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +++K+       K  Q++ +T+++EA  +E ++  + +P   +G+N
Sbjct: 197 RDEGLHCSFACQLYSKLKL-------KLSQEEIQTIINEAVDVEKSFICDALPVSLIGMN 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G + ++  ++NPF WM  +I L+ + NFFE RV EYQ+   
Sbjct: 250 SRLMAQYIEFVADRMLTDLGYQAMY-GSKNPFDWMD-MISLEGKTNFFEKRVGEYQKSGV 307

Query: 122 L 122
           +
Sbjct: 308 M 308


>gi|330941350|gb|EGH44202.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 109

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/109 (60%), Positives = 82/109 (75%)

Query: 17  QIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRR 76
           QIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+NA   E Y++FIANRR
Sbjct: 1   QIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRR 60

Query: 77  CHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAELKWD 125
             QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G  L WD
Sbjct: 61  LSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGGALSWD 109


>gi|218197485|gb|EEC79912.1| hypothetical protein OsI_21460 [Oryza sativa Indica Group]
          Length = 345

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  + + + ++ +A  +E  +  + +P   VG+N
Sbjct: 215 RDEGLHCDFACLLYDLLRG-------KLDESRVQEIVADAVDIEREFVCDALPVALVGMN 267

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G + ++    NPF WM E+I L+ + NFFE RV +YQ+ + 
Sbjct: 268 GELMSQYIEFVADRLLMALGCKKMYNVA-NPFDWM-ELISLQGKTNFFEKRVGDYQKASV 325

Query: 122 LK 123
           + 
Sbjct: 326 MS 327


>gi|237845387|ref|XP_002371991.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Toxoplasma gondii ME49]
 gi|211969655|gb|EEB04851.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Toxoplasma gondii ME49]
 gi|221501644|gb|EEE27410.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Toxoplasma gondii VEG]
          Length = 391

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 9/123 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +Q+K + P        +  + M+ EA  +E A+  E +P   +G+N
Sbjct: 266 RDEGLHADFACLLYSQLKHKLPD-------KVVQDMVREAVTVERAFICEALPVDLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++F+A+R    +G+  +F +  NPF WM E+I L+ + NFFE RV EYQ+   
Sbjct: 319 NRSMAQYIEFVADRLLTSLGVPKIF-FATNPFDWM-ELISLQGKTNFFEKRVGEYQKAGV 376

Query: 122 LKW 124
           +  
Sbjct: 377 MAD 379


>gi|225451453|ref|XP_002269951.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|147804660|emb|CAN64484.1| hypothetical protein VITISV_012640 [Vitis vinifera]
          Length = 329

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 68/122 (55%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ ++  +E  +  + +P   VG+N
Sbjct: 200 RDEGLHCDFACLLYSLLR-------NKLSEERVKAIVADSVDIEREFVCDALPCALVGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G   ++  + NPF WM E+I L+ + NFFE RV EYQ+ + 
Sbjct: 253 SALMSQYIEFVADRLLGALGYGKMYNVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKASV 310

Query: 122 LK 123
           + 
Sbjct: 311 MS 312


>gi|325119319|emb|CBZ54873.1| hypothetical protein NCLIV_052980 [Neospora caninum Liverpool]
          Length = 392

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 9/123 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +Q+K + P        +  + M+ EA  +E A+  E +P   +G+N
Sbjct: 267 RDEGLHADFACLLYSQLKNKLPD-------KVVQDMVREAVTVERAFICEALPVDLIGMN 319

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++F+A+R    +G+  +F +  NPF WM E+I L+ + NFFE RV EYQ+   
Sbjct: 320 NRSMAQYIEFVADRLLTSLGVPKIF-FATNPFDWM-ELISLQGKTNFFEKRVGEYQKAGV 377

Query: 122 LKW 124
           +  
Sbjct: 378 MAD 380


>gi|221480670|gb|EEE19110.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Toxoplasma gondii GT1]
          Length = 391

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 9/123 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +Q+K + P        +  + M+ EA  +E A+  E +P   +G+N
Sbjct: 266 RDEGLHADFACLLYSQLKHKLPD-------KVVQDMVREAVTVERAFICEALPVDLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++F+A+R    +G+  +F +  NPF WM E+I L+ + NFFE RV EYQ+   
Sbjct: 319 NRSMAQYIEFVADRLLTSLGVPKIF-FATNPFDWM-ELISLQGKTNFFEKRVGEYQKAGV 376

Query: 122 LKW 124
           +  
Sbjct: 377 MAD 379


>gi|289582310|ref|YP_003480776.1| ribonucleoside-diphosphate reductase [Natrialba magadii ATCC 43099]
 gi|289531863|gb|ADD06214.1| Ribonucleoside-diphosphate reductase [Natrialba magadii ATCC 43099]
          Length = 330

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 62/124 (50%), Positives = 86/124 (69%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDESLH+ FG+D+I+QI++ENP +WT  F  +   ++ EA  LE  YA+E  P   +G+
Sbjct: 208 MRDESLHVGFGVDLIDQIRMENPDVWTDAFGDEVVELITEAVELEKIYAYEACPDEILGM 267

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A    +Y++ IA+RR  Q+ L   +  T+NPFPW+SE +DL KEKNFFET+VTEYQ G 
Sbjct: 268 SADQFAEYVEHIADRRLGQLDLPTQY-GTDNPFPWLSEQVDLNKEKNFFETQVTEYQSGG 326

Query: 121 ELKW 124
            L W
Sbjct: 327 SLDW 330


>gi|115466138|ref|NP_001056668.1| Os06g0127900 [Oryza sativa Japonica Group]
 gi|55296211|dbj|BAD67929.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
 gi|113594708|dbj|BAF18582.1| Os06g0127900 [Oryza sativa Japonica Group]
 gi|186920368|gb|ACC95437.1| ribonucleotide diphosphate reductase small subunit 2 [Oryza sativa
           Japonica Group]
 gi|215706414|dbj|BAG93270.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222634884|gb|EEE65016.1| hypothetical protein OsJ_19968 [Oryza sativa Japonica Group]
          Length = 345

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  + + + ++ +A  +E  +  + +P   VG+N
Sbjct: 215 RDEGLHCDFACLLYDLLRG-------KLDESRVQEIVADAVDIEREFVCDALPVALVGMN 267

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G + ++    NPF WM E+I L+ + NFFE RV +YQ+ + 
Sbjct: 268 GELMSQYIEFVADRLLMALGCKKMYNVA-NPFDWM-ELISLQGKTNFFEKRVGDYQKASV 325

Query: 122 LK 123
           + 
Sbjct: 326 MS 327


>gi|212723480|ref|NP_001131892.1| hypothetical protein LOC100193273 [Zea mays]
 gi|194692834|gb|ACF80501.1| unknown [Zea mays]
 gi|195624040|gb|ACG33850.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
          Length = 339

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 69/122 (56%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++       +K  + + RT++ +A  +E  +  + +P   VG+N
Sbjct: 209 RDEGLHCDFACLLYDVLR-------SKLDEARVRTIVADAVDIEREFVCDALPVSLVGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G + ++  T NPF WM E+I L+ + NFFE RV +YQ+ + 
Sbjct: 262 GDLMSQYIEFVADRLLMALGCKKMYNVT-NPFDWM-ELISLQGKTNFFEKRVGDYQKASV 319

Query: 122 LK 123
           + 
Sbjct: 320 MN 321


>gi|75224904|sp|Q6Y657|RIR2B_ARATH RecName: Full=Putative ribonucleoside-diphosphate reductase small
           chain B; AltName: Full=Ribonucleoside-diphosphate
           reductase R2B subunit; AltName: Full=Ribonucleotide
           reductase small subunit B
 gi|37729626|gb|AAO62422.1| ribonucleotide reductase small subunit [Arabidopsis thaliana]
          Length = 333

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++       TK  + + + ++ +A  +E  +  + +P   VG+N
Sbjct: 201 RDEGLHCDFACLIYSLLR-------TKLDEDRLKAIVCDAVEIEREFVCDALPCALVGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G   ++  + NPF WM E+I L+ + NFFE RV EYQ+ + 
Sbjct: 254 RELMSQYIEFVADRLLAALGCAKVYGVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKASI 311

Query: 122 LK 123
           + 
Sbjct: 312 MS 313


>gi|255536887|ref|XP_002509510.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis]
 gi|223549409|gb|EEF50897.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis]
          Length = 329

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 200 RDEGLHCDFACLIYSLLKK-------KLSEERVKGIVRDAVNIEREFVCDALPCALVGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G    +  + NPF WM E+I L+ + NFFE RV EYQ+ A 
Sbjct: 253 GELMSQYIEFVADRLLGALGCGKEYNVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKAAV 310

Query: 122 LK 123
           + 
Sbjct: 311 MS 312


>gi|308806626|ref|XP_003080624.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
           tauri]
 gi|116059085|emb|CAL54792.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
           tauri]
          Length = 241

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +          L  K  ++  R ++ EA  +E  +  +++P   VG+N
Sbjct: 113 RDEGLHRDFACLLYQM-------LNNKPDEEVVRKIVTEAVEIEKEFVCDSLPCALVGMN 165

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A     Y++++A+     +G+   +  T NPF WM E+I L+ + NFFE RV EYQ+   
Sbjct: 166 AGMMSDYIEYVADHLFTSLGMPKEYN-TANPFDWM-ELISLQGKTNFFEKRVGEYQKAGV 223

Query: 122 LK 123
           + 
Sbjct: 224 MN 225


>gi|256081213|ref|XP_002576867.1| ribonucleoside-diphosphate reductase small chain [Schistosoma
           mansoni]
 gi|238662153|emb|CAZ33104.1| ribonucleoside-diphosphate reductase small chain, putative
           [Schistosoma mansoni]
          Length = 365

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   I  + P       +++  +++ EA L+E  +  E +P   +G+N
Sbjct: 237 RDEGLHCDFACLLFKHIIKKPP-------KERVESIIREAVLIEQEFLSEALPVSLIGMN 289

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++FIA+R   ++G E ++ +++NPF +M E I ++ + NFFE RV EYQ+   
Sbjct: 290 CKLMCQYIEFIADRLLVELGYEKMY-HSDNPFDFM-ENISIEGKTNFFEKRVGEYQRAGV 347

Query: 122 LK 123
           + 
Sbjct: 348 MS 349


>gi|307110551|gb|EFN58787.1| hypothetical protein CHLNCDRAFT_34102 [Chlorella variabilis]
          Length = 335

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  +  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 207 RDEGLHTDFACLLYR-------HIHNRLSEERVAEIVTQAVEIEKEFICDALPVDLIGMN 259

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G   ++  + NPF WM E+I L+ + NFFE RV +YQ+   
Sbjct: 260 SRLMGQYIEFVADRLLVALGNPKVYNVS-NPFDWM-ELISLQGKTNFFEKRVGDYQKAGV 317

Query: 122 LK 123
           + 
Sbjct: 318 MN 319


>gi|15229476|ref|NP_189000.1| RNR2A (RIBONUCLEOTIDE REDUCTASE 2A); ribonucleoside-diphosphate
           reductase [Arabidopsis thaliana]
 gi|27735240|sp|P50651|RIR2A_ARATH RecName: Full=Ribonucleoside-diphosphate reductase small chain A;
           AltName: Full=Ribonucleoside-diphosphate reductase R2A
           subunit; Short=AtRNR2; Short=Protein R2at; AltName:
           Full=Ribonucleotide reductase small subunit A
 gi|13937232|gb|AAK50108.1|AF372971_1 AT3g23580/MDB19_7 [Arabidopsis thaliana]
 gi|9294514|dbj|BAB02776.1| ribonucleotide reductase [Arabidopsis thaliana]
 gi|23505945|gb|AAN28832.1| At3g23580/MDB19_7 [Arabidopsis thaliana]
 gi|332643258|gb|AEE76779.1| Ribonucleoside-diphosphate reductase small chain A [Arabidopsis
           thaliana]
          Length = 341

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P        +K   ++HEA  +E  +  + +P   +G+N
Sbjct: 212 RDEGLHCDFACLLYSLLQKQLP-------LEKVYQIVHEAVEIETEFVCKALPCDLIGMN 264

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY+QF+A+R    +G E  +K  ENPF WM E I L+ + NFFE RV EYQ+ + 
Sbjct: 265 SNLMSQYIQFVADRLLVTLGCERTYK-AENPFDWM-EFISLQGKTNFFEKRVGEYQKASV 322

Query: 122 LK 123
           + 
Sbjct: 323 MS 324


>gi|242076364|ref|XP_002448118.1| hypothetical protein SORBIDRAFT_06g021460 [Sorghum bicolor]
 gi|241939301|gb|EES12446.1| hypothetical protein SORBIDRAFT_06g021460 [Sorghum bicolor]
          Length = 339

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  + + R ++ +A  +E  +  + +P   VG+N
Sbjct: 209 RDEGLHCDFACLLYDLLRG-------KLDESRVREIVADAVDIEREFVCDALPVALVGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G + ++    NPF WM E+I L+ + NFFE RV EYQ+ + 
Sbjct: 262 GALMSQYIEFVADRLLMALGHKKMYNVA-NPFDWM-ELISLQGKTNFFEKRVGEYQKASV 319

Query: 122 LK 123
           + 
Sbjct: 320 MS 321


>gi|297831106|ref|XP_002883435.1| RNR2/RNR2A [Arabidopsis lyrata subsp. lyrata]
 gi|297329275|gb|EFH59694.1| RNR2/RNR2A [Arabidopsis lyrata subsp. lyrata]
          Length = 341

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P        +K   ++HEA  +E  +  + +P   +G+N
Sbjct: 212 RDEGLHCDFACLLYSLLQKQLP-------LEKVYQIVHEAVEIETEFVCKALPCDLIGMN 264

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY+QF+A+R    +G E  +K  ENPF WM E I L+ + NFFE RV EYQ+ + 
Sbjct: 265 SNLMSQYIQFVADRLLVTLGCERRYK-AENPFDWM-EFISLQGKTNFFEKRVGEYQKASV 322

Query: 122 LK 123
           + 
Sbjct: 323 MS 324


>gi|225684487|gb|EEH22771.1| ribonucleoside-diphosphate reductase small chain A
           [Paracoccidioides brasiliensis Pb03]
          Length = 413

 Score =  164 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   +  + ++ EA  +E  +  + +P   +G+N
Sbjct: 274 RDEGLHTDFACLLFS-------HLRHRPSPEAVQKIITEAVAIEQEFLTDALPCALLGMN 326

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G + ++  + NPF +M   I L  + NFFE RV +YQ+   
Sbjct: 327 AKLMCQYIEFVADRLLVALGNKKVYN-STNPFDFMD-NISLTGKTNFFEKRVGDYQKAGV 384

Query: 122 L 122
           +
Sbjct: 385 M 385


>gi|330921941|ref|XP_003299625.1| hypothetical protein PTT_10664 [Pyrenophora teres f. teres 0-1]
 gi|311326599|gb|EFQ92269.1| hypothetical protein PTT_10664 [Pyrenophora teres f. teres 0-1]
          Length = 410

 Score =  164 bits (415), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + +        L  +  ++  R ++ EA  +E  +  + +P   +G+N
Sbjct: 267 RDEGMHTDFACLLFSL-------LNNRPSKESVRAIITEAVEIEQEFLSDALPCALLGMN 319

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G   ++  T NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 320 ATLMCQYIEFVADRLLLALGNTKVYNAT-NPFDFM-ENISLAGKTNFFEKRVGDYQKAGV 377

Query: 122 L 122
           +
Sbjct: 378 M 378


>gi|169860861|ref|XP_001837065.1| ribonucleotide reductase small subunit [Coprinopsis cinerea
           okayama7#130]
 gi|116501787|gb|EAU84682.1| ribonucleotide reductase small subunit [Coprinopsis cinerea
           okayama7#130]
          Length = 414

 Score =  163 bits (414), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 9/120 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + + +K   PH          + ++ EA  +E  +  + +P   +G+N
Sbjct: 278 RDEGMHTDFACLLFSHLK-RRPH------PDVVKRIITEAVAIEQEFLTDALPVKLIGMN 330

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G E ++  + NPF +M  +I L+ + NFFE RV++Y +   
Sbjct: 331 AELMCQYIEFVADRLLVSLGNEKVYN-STNPFDFMD-MISLQGKTNFFEKRVSDYAKAGV 388


>gi|156387375|ref|XP_001634179.1| predicted protein [Nematostella vectensis]
 gi|156221259|gb|EDO42116.1| predicted protein [Nematostella vectensis]
          Length = 384

 Score =  163 bits (414), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 9/123 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  ++  R ++ +A ++E  +    +P   +G+N
Sbjct: 259 RDEGLHCDFACLMYK-------YLVNKPDEETVRGIIKDAVVIEQEFLTSALPVKLIGMN 311

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +  + ++   ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 312 CALMRQYIEFVADRLLVALNCQKVYN-AENPFDFM-ENISLEGKTNFFEKRVGEYQKSGV 369

Query: 122 LKW 124
           +  
Sbjct: 370 MSD 372


>gi|149408710|ref|XP_001506085.1| PREDICTED: similar to 5,10-methenyltetrahydrofolate synthetase
           [Ornithorhynchus anatinus]
          Length = 394

 Score =  163 bits (414), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ + ++  A  +E  +  E +P   +G+N
Sbjct: 269 RDEGLHCDFACLMFK-------HLVHKPSEERVKEIIINAVRIEQEFLTEALPVKLIGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +FK  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 322 CTLMKQYIEFVADRLLLELGFSKIFK-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 379

Query: 122 LK 123
           + 
Sbjct: 380 MS 381


>gi|198420293|ref|XP_002130242.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase subunit
           M2 (Ribonucleotide reductase small subunit)
           (Ribonucleotide reductase small chain) [Ciona
           intestinalis]
          Length = 393

 Score =  163 bits (414), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  + +   ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHCDFACLMFK-------HLLHKPSEARVVEIVKDAVTIEQEFLTDALPVALIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +FK  ENPF +M E+I L+ + NFFE RV EYQ+   
Sbjct: 321 NKLMKQYIEFVADRLLVELGCSKVFK-VENPFDFM-ELISLEGKTNFFEKRVGEYQKAGV 378

Query: 122 L 122
           +
Sbjct: 379 M 379


>gi|840719|emb|CAA54549.1| ribonucleotide reductase R2 [Arabidopsis thaliana]
          Length = 340

 Score =  163 bits (414), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +I+ +++  P        +K   ++HEA  +E  +  + +P   +G+N
Sbjct: 211 RDEGLHCDFACLLISLLQLHVP-------LEKVYQIVHEAVEIETEFVCKALPCDLIGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY+QF+A+R    +G E  +K  ENPF WM E I L+ + NFFE RV EYQ+ + 
Sbjct: 264 SNLMSQYIQFVADRLLVTLGCERTYK-AENPFDWM-EFISLQGKTNFFEKRVGEYQKASV 321

Query: 122 LK 123
           + 
Sbjct: 322 MS 323


>gi|242095388|ref|XP_002438184.1| hypothetical protein SORBIDRAFT_10g009290 [Sorghum bicolor]
 gi|241916407|gb|EER89551.1| hypothetical protein SORBIDRAFT_10g009290 [Sorghum bicolor]
          Length = 339

 Score =  163 bits (414), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   ++       +K  + + R ++ +A  +E  +  + +P   VG+N
Sbjct: 209 RDEGLHCDFACLLYELLR-------SKLDEARVREIVADAVDIEREFVCDALPVALVGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G + ++  T NPF WM E+I L+ + NFFE RV +YQ+ + 
Sbjct: 262 GGLMSQYIEFVADRLLMALGCKKMYNAT-NPFDWM-ELISLQGKTNFFEKRVGDYQKASV 319

Query: 122 LK 123
           + 
Sbjct: 320 MN 321


>gi|327261313|ref|XP_003215475.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           isoform 3 [Anolis carolinensis]
          Length = 391

 Score =  163 bits (413), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 266 RDEGLHCDFACLMFK-------HLVHKPSEERVREIITNAVRIEQEFLTEALPVNLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 319 CTLMKQYIEFVADRLILELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 376

Query: 122 LK 123
           + 
Sbjct: 377 MS 378


>gi|322491821|emb|CBZ27094.1| ribonucleoside-diphosphate reductase small chain,putative
           [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 392

 Score =  163 bits (413), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N       H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 265 RDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFFE +V EYQ+   
Sbjct: 319 AELMAQYIEFVADRLLVSLGEEKHYNSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAGV 376

Query: 122 LK 123
           + 
Sbjct: 377 MS 378


>gi|149637725|ref|XP_001508783.1| PREDICTED: similar to Ribonucleotide reductase M2 B (TP53
           inducible) [Ornithorhynchus anatinus]
          Length = 401

 Score =  163 bits (413), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +         K  + K + ++ +A  +E  +  E +P G +G+N
Sbjct: 276 RDEGLHCDFACLMFQYLVK-------KPSEDKVKEIIIDAVEIEQEFLTEALPVGLIGMN 328

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F +++NPF +M E I L+ + NFFE RV+EYQ+ A 
Sbjct: 329 CTLMKQYIEFVADRLLVELGFSKVF-HSDNPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 386

Query: 122 LK 123
           + 
Sbjct: 387 MS 388


>gi|327261309|ref|XP_003215473.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           isoform 1 [Anolis carolinensis]
          Length = 394

 Score =  163 bits (413), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 269 RDEGLHCDFACLMFK-------HLVHKPSEERVREIITNAVRIEQEFLTEALPVNLIGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 322 CTLMKQYIEFVADRLILELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 379

Query: 122 LK 123
           + 
Sbjct: 380 MS 381


>gi|225432510|ref|XP_002279943.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 340

 Score =  163 bits (413), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P        QK   ++HEA  +E  +  E +P   +G+N
Sbjct: 212 RDEGLHCDFACLLYSLLQKQLPW-------QKVHHIVHEAVEIETQFVCEALPCALIGMN 264

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G E  +   ENPF WM E I L+ + NFFE RV +YQ+ + 
Sbjct: 265 ATLMSQYIKFVADRLLVALGYERKYN-VENPFDWM-EFISLQGKANFFERRVGDYQKASI 322

Query: 122 LK 123
           + 
Sbjct: 323 MS 324


>gi|255551489|ref|XP_002516790.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis]
 gi|223543878|gb|EEF45404.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis]
          Length = 342

 Score =  163 bits (413), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ +          QK + ++HEA  +E  +  + +P   +G+N
Sbjct: 213 RDEGLHCDFACLLYSLLQKQLQW-------QKVQQIVHEAVEIETEFVCDALPCALIGMN 265

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G +  +   ENPF WM E I L+ + NFFE RV +YQ+ + 
Sbjct: 266 STLMSQYIKFVADRLLVALGYQRKYN-VENPFDWM-EFISLQGKANFFERRVGDYQKASV 323

Query: 122 LK 123
           + 
Sbjct: 324 MS 325


>gi|18859327|ref|NP_571525.1| ribonucleoside-diphosphate reductase subunit M2 [Danio rerio]
 gi|292624782|ref|XP_002665783.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Danio rerio]
 gi|3914657|sp|P79733|RIR2_DANRE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase protein R2 class
           I; AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|1695831|gb|AAB37103.1| ribonucleotide reductase protein R2 class I [Danio rerio]
 gi|27881838|gb|AAH44355.1| Ribonucleotide reductase M2 polypeptide [Danio rerio]
 gi|56207929|emb|CAI21240.1| ribonucleotide reductase M2 polypeptide [Danio rerio]
 gi|182889152|gb|AAI64707.1| Rrm2 protein [Danio rerio]
          Length = 386

 Score =  163 bits (413), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  ++  + ++  A  +E  +  + +P   +G+N
Sbjct: 261 RDEGLHCDFACLMFK-------HLINKPSEETVKKIIMNAVEIEQEFLTDALPVKLIGMN 313

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G + +++  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 314 CDLMKQYIEFVADRLLLELGFDKVYR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 371

Query: 122 LK 123
           + 
Sbjct: 372 MS 373


>gi|226528734|ref|NP_001150842.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
 gi|195642302|gb|ACG40619.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
          Length = 339

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   ++        K  + + R ++ +A  +E  +  + +P   VG+N
Sbjct: 209 RDEGLHCDFACLLYELLR-------NKLDEARVREIVADAVDIEREFVCDALPVALVGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G + ++  T NPF WM E+I L  + NFFE RV +YQ+ + 
Sbjct: 262 GDLMSQYIEFVADRLLMALGCKKMYNVT-NPFDWM-ELISLMGKTNFFEKRVGDYQKASV 319

Query: 122 LK 123
           + 
Sbjct: 320 MN 321


>gi|212274629|ref|NP_001130908.1| hypothetical protein LOC100192012 [Zea mays]
 gi|195636980|gb|ACG37958.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
          Length = 339

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  + + R ++ +A  +E  +  + +P   VG+N
Sbjct: 209 RDEGLHCDFACLLYDLLRG-------KLDESRVREIVADAVDIEREFVCDALPVALVGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EYQ+ + 
Sbjct: 262 GGLMSQYIEFVADRLLMALGHRKMYNVA-NPFDWM-ELISLQGKTNFFEKRVGEYQKASV 319

Query: 122 LK 123
           + 
Sbjct: 320 MS 321


>gi|194690416|gb|ACF79292.1| unknown [Zea mays]
 gi|194704028|gb|ACF86098.1| unknown [Zea mays]
 gi|195619132|gb|ACG31396.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
 gi|223943167|gb|ACN25667.1| unknown [Zea mays]
          Length = 339

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  + + R ++ +A  +E  +  + +P   VG+N
Sbjct: 209 RDEGLHCDFACLLYDLLRG-------KLDESRVREIVADAVDIEREFVCDALPVALVGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EYQ+ + 
Sbjct: 262 GGLMSQYIEFVADRLLMALGHRKMYNVA-NPFDWM-ELISLQGKTNFFEKRVGEYQKASV 319

Query: 122 LK 123
           + 
Sbjct: 320 MS 321


>gi|291244313|ref|XP_002742041.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
           [Saccoglossus kowalevskii]
          Length = 463

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 68/122 (55%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K  +++ R ++ +A  +E  + +E +P G +G+N
Sbjct: 337 RDEGLHCDFACLIFS-------HLTYKPSKERIRNIITQAVDIEKEFWNEALPVGLIGMN 389

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                 Y++F+A+R   ++  + ++ + ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 390 VTLMNYYVEFVADRLLLELNCDKVY-HRENPFDFM-ENISLEGKTNFFEKRVGEYQKANV 447

Query: 122 LK 123
           + 
Sbjct: 448 MS 449


>gi|56118690|ref|NP_001007890.1| ribonucleotide reductase M2, gene 2 [Xenopus (Silurana) tropicalis]
 gi|51258920|gb|AAH80161.1| ribonucleotide reductase M2 polypeptide [Xenopus (Silurana)
           tropicalis]
          Length = 386

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++   ++ +A  +E  +  E +P   +G+N
Sbjct: 261 RDEGLHCDFACLMFK-------HLVNKPSEERVVQLITDAVQIEQEFLTEALPVNLIGMN 313

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +FK T NPF +M E I L+ + NFFE +V EYQ+   
Sbjct: 314 CTLMKQYIEFVADRLLLELGFNKVFKAT-NPFDFM-ENISLEGKTNFFEKKVGEYQKMGV 371

Query: 122 LK 123
           + 
Sbjct: 372 MS 373


>gi|89268988|emb|CAJ81953.1| ribonucleotide reductase m2 polypeptide [Xenopus (Silurana)
           tropicalis]
 gi|89269815|emb|CAJ81580.1| ribonucleotide reductase m2 polypeptide [Xenopus (Silurana)
           tropicalis]
          Length = 386

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++   ++ +A  +E  +  E +P   +G+N
Sbjct: 261 RDEGLHCDFACLMFK-------HLVNKPSEERVVQLITDAVQIEQEFLTEALPVNLIGMN 313

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +FK T NPF +M E I L+ + NFFE +V EYQ+   
Sbjct: 314 CTLMKQYIEFVADRLLLELGFNKVFKAT-NPFDFM-ENISLEGKTNFFEKKVGEYQKMGV 371

Query: 122 LK 123
           + 
Sbjct: 372 MS 373


>gi|189199548|ref|XP_001936111.1| ribonucleoside-diphosphate reductase subunit M2 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187983210|gb|EDU48698.1| ribonucleoside-diphosphate reductase subunit M2 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 410

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + +        L  +   ++ R ++ EA  +E  +  + +P   +G+N
Sbjct: 267 RDEGMHTDFACLLFSL-------LNNRPSNEEVRAIITEAVEIEQEFLSDALPCALLGMN 319

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G   ++  T NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 320 ATLMCQYIEFVADRLLLALGNTKVYNAT-NPFDFM-ENISLAGKTNFFEKRVGDYQKAGV 377

Query: 122 L 122
           +
Sbjct: 378 M 378


>gi|72008642|ref|XP_780110.1| PREDICTED: similar to ribonucleotide reductase protein R2 class I
           isoform 1 [Strongylocentrotus purpuratus]
 gi|115928579|ref|XP_001179668.1| PREDICTED: similar to ribonucleotide reductase protein R2 class I
           [Strongylocentrotus purpuratus]
          Length = 412

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  ++  + ++ EA  +E  +  + +P   +G+N
Sbjct: 282 RDEGLHCDFACLMFK-------HLNNKPDEEHVQGIIKEAVAIEQEFLTDALPCSLIGMN 334

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A   ++Y++F+A+R   ++G   ++K  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 335 AVLMKRYIEFVADRLLVELGCGKIWK-VENPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 392

Query: 122 LK 123
           + 
Sbjct: 393 MS 394


>gi|154337607|ref|XP_001565036.1| ribonucleoside-diphosphate reductase small chain [Leishmania
           braziliensis MHOM/BR/75/M2904]
 gi|134062075|emb|CAM45178.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 392

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N       H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 265 RDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFFE +V EYQ+   
Sbjct: 319 AELMAQYIEFVADRLLVSLGEEKHYNATQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAGV 376

Query: 122 LK 123
           + 
Sbjct: 377 MS 378


>gi|327261311|ref|XP_003215474.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           isoform 2 [Anolis carolinensis]
          Length = 390

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPSEERVREIITNAVRIEQEFLTEALPVNLIGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 318 CTLMKQYIEFVADRLILELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 375

Query: 122 LK 123
           + 
Sbjct: 376 MS 377


>gi|266918|sp|P07201|RIR2_SPISO RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit;
           AltName: Full=p41
 gi|10342|emb|CAA38919.1| M2 (small) subunit of ribonucleotide reductase [Spisula
           solidissima]
          Length = 384

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K  Q++   ++ EA  +E  +  E +P   +G+N
Sbjct: 256 RDEGLHCDFACLMFS-------HLVNKPSQERIHQIIDEAVKIEQVFLTEALPCRLIGMN 308

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R   ++  + L+   ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 309 CDLMRQYIEFVADRLLLELKCDKLYN-KENPFDFM-EHISLEGKTNFFEKRVGEYQKMGV 366

Query: 122 LK 123
           + 
Sbjct: 367 MS 368


>gi|313675915|ref|YP_004053911.1| ribonucleoside-diphosphate reductase [Marivirga tractuosa DSM 4126]
 gi|312942613|gb|ADR21803.1| Ribonucleoside-diphosphate reductase [Marivirga tractuosa DSM 4126]
          Length = 331

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 69/122 (56%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N       HL  K  ++K   ++ +A  +E  +  +++P   +G+N
Sbjct: 202 RDEGLHCDFACLLYN------DHLVNKLSKEKVTAIITDAVEIEKEFVTDSLPVKLIGMN 255

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R   ++  + ++  + NPF +M E+I L+ + NFFE RV +YQ+   
Sbjct: 256 ADLMCQYIEFVADRLLQELRCDKVY-GSSNPFDFM-EMISLQGKTNFFEKRVGDYQKAGV 313

Query: 122 LK 123
           +K
Sbjct: 314 MK 315


>gi|322493026|emb|CBZ28311.1| ribonucleoside-diphosphate reductase small chain,putative
           [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 388

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N       H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 261 RDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 314

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFFE +V EYQ+   
Sbjct: 315 AELMAQYIEFVADRLLVSLGEEKHYNSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAGV 372

Query: 122 LK 123
           + 
Sbjct: 373 MS 374


>gi|312216546|emb|CBX96496.1| similar to ribonucleoside-diphosphate reductase subunit M2
           [Leptosphaeria maculans]
          Length = 410

 Score =  162 bits (411), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + +        L T+  ++  + ++ EA  +E  +  + +P   +G+N
Sbjct: 266 RDEGMHTDFACLLFSL-------LNTRPSKESVQAIITEAVEIEKEFLSDALPCALLGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G    +  T NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 319 ATLMCQYIEFVADRLLLSLGNTKFYNAT-NPFDFM-ENISLAGKTNFFEKRVGDYQKAGV 376

Query: 122 L 122
           +
Sbjct: 377 M 377


>gi|291336894|gb|ADD96423.1| hypothetical protein [uncultured organism MedDCM-OCT-S09-C426]
          Length = 147

 Score =  162 bits (411), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 58/125 (46%), Positives = 83/125 (66%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH+NFG  +IN +K + P +WTK+F++++   + +A  LEI YAH+ +P+G +GL
Sbjct: 22  LRDESLHINFGTYLINTLKEQYPTIWTKKFEEETIEHIKKAVQLEINYAHDVLPRGILGL 81

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA     YM +I NRR   IGL+  F+   NPFPW+SEV+D     NFFE +V +YQ   
Sbjct: 82  NADMFVDYMHYIGNRRLEGIGLDYRFESDTNPFPWLSEVVDTGAMTNFFERKVKDYQNSG 141

Query: 121 ELKWD 125
            L+ D
Sbjct: 142 VLEDD 146


>gi|154340038|ref|XP_001565976.1| ribonucleoside-diphosphate reductase small chain [Leishmania
           braziliensis MHOM/BR/75/M2904]
 gi|134063294|emb|CAM45500.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 388

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N       H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 261 RDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 314

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFFE +V EYQ+   
Sbjct: 315 AELMAQYIEFVADRLLVSLGEEKHYNATQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAGV 372

Query: 122 LK 123
           + 
Sbjct: 373 MS 374


>gi|121713826|ref|XP_001274524.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           clavatus NRRL 1]
 gi|119402677|gb|EAW13098.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           clavatus NRRL 1]
          Length = 405

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  ++    ++ EA  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHTDFACLLFS-------HLNNRPDKKVVEDIIVEAVAIEQEFLTDALPVALLGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G +  +  + NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYYN-SPNPFDFM-ESISLAGKTNFFEKRVGDYQKAGV 378

Query: 122 L 122
           +
Sbjct: 379 M 379


>gi|326917964|ref|XP_003205263.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           [Meleagris gallopavo]
          Length = 353

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       +L  +  +++ R ++  A  +E  +  E +P G +G+N
Sbjct: 228 RDEGLHCDFACLMFH-------YLVNRPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F + ENPF +M E I L+ + NFFE RV+EYQ+ A 
Sbjct: 281 CTLMKQYIEFVADRLLMELGFSKVF-HAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 338

Query: 122 L 122
           +
Sbjct: 339 M 339


>gi|212533263|ref|XP_002146788.1| ribonucleotide reductase small subunit RnrA, putative [Penicillium
           marneffei ATCC 18224]
 gi|210072152|gb|EEA26241.1| ribonucleotide reductase small subunit RnrA, putative [Penicillium
           marneffei ATCC 18224]
          Length = 406

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL T+   +    ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHTDFACMLFS-------HLNTRPNPKVIEDIIVDAVAIEQEFLTDALPCALLGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G +  +  T NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYYNAT-NPFDFM-ENISLAGKTNFFEKRVGDYQKAGV 378

Query: 122 LK 123
           + 
Sbjct: 379 MN 380


>gi|146090952|ref|XP_001466403.1| ribonucleoside-diphosphate reductase small chain [Leishmania
           infantum JPCM5]
 gi|321399462|emb|CBZ08664.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania infantum JPCM5]
          Length = 392

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N       H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 265 RDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G E  ++ T+ PF +M E+I L+ + NFFE +V EYQ+   
Sbjct: 319 AELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAGV 376

Query: 122 LK 123
           + 
Sbjct: 377 MS 378


>gi|4557845|ref|NP_001025.1| ribonucleoside-diphosphate reductase subunit M2 isoform 2 [Homo
           sapiens]
 gi|400979|sp|P31350|RIR2_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|36155|emb|CAA42181.1| small subunit ribonucleotide reductase [Homo sapiens]
 gi|251637|gb|AAA09577.1| ribonucleotide reductase R2 subunit [Homo sapiens]
 gi|12804875|gb|AAH01886.1| Ribonucleotide reductase M2 polypeptide [Homo sapiens]
 gi|14029165|gb|AAK51163.1| ribonucleotide reductase M2 subunit [Homo sapiens]
 gi|20988810|gb|AAH30154.1| Ribonucleotide reductase M2 polypeptide [Homo sapiens]
 gi|62702173|gb|AAX93099.1| unknown [Homo sapiens]
 gi|123981920|gb|ABM82789.1| ribonucleotide reductase M2 polypeptide [synthetic construct]
 gi|123996753|gb|ABM85978.1| ribonucleotide reductase M2 polypeptide [synthetic construct]
 gi|189053955|dbj|BAG36462.1| unnamed protein product [Homo sapiens]
 gi|261861600|dbj|BAI47322.1| ribonucleotide reductase M2 [synthetic construct]
          Length = 389

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 264 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 316

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 317 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 374

Query: 122 LK 123
           + 
Sbjct: 375 MS 376


>gi|148705043|gb|EDL36990.1| ribonucleotide reductase M2 [Mus musculus]
          Length = 411

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ R ++  A  +E  +  E +P   +G+N
Sbjct: 286 RDEGLHCDFACLMFK-------HLVHKPAEQRVREIITNAVRIEQEFLTEALPVKLIGMN 338

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 339 CTLMKQYIEFVADRLMLELGFNKIFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 396

Query: 122 LK 123
           + 
Sbjct: 397 MS 398


>gi|2500209|sp|Q60561|RIR2_MESAU RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|49650|emb|CAA48232.1| ribonucleotide reductase [Mesocricetus auratus]
          Length = 386

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPSEQRVQEIITNAVRIEQEFLTEALPVKLIGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +FK  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIFK-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 375

Query: 122 LK 123
           + 
Sbjct: 376 MS 377


>gi|294055010|ref|YP_003548668.1| Ribonucleoside-diphosphate reductase [Coraliomargarita akajimensis
           DSM 45221]
 gi|293614343|gb|ADE54498.1| Ribonucleoside-diphosphate reductase [Coraliomargarita akajimensis
           DSM 45221]
          Length = 360

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 53/122 (43%), Positives = 81/122 (66%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES H+    ++I  +  EN  +WT EF+++ R ++ EA  LE  +  + +P   VGL
Sbjct: 231 LRDESNHIEVFRNLIMDLIEENEDVWTPEFREELRDLMREAVTLEKDFIRDCLPVNSVGL 290

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A    QY+ +IA+RR   +GL PL    +NPFPW++E++D+KKE+NFFE RVTEYQ+ +
Sbjct: 291 SADEFCQYIDYIADRRLEGVGLAPLSPGVDNPFPWLAEMMDIKKEQNFFEGRVTEYQKAS 350

Query: 121 EL 122
            L
Sbjct: 351 AL 352


>gi|224007863|ref|XP_002292891.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220971753|gb|EED90087.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 297

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 9/120 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +++  + P         +   ++  A  +E  +  + +P   +G+N
Sbjct: 172 RDEGLHCDFACLLYSKLVNKLPE-------SRITKIITVAVEIEKEFVSDALPVELIGMN 224

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +     Y++F A+R    +G    +  T NPF WM E+I L+ + NFFE RV EY +   
Sbjct: 225 SKLMCDYIEFCADRLLGALGCSKFYNAT-NPFEWM-EMISLQGKTNFFEKRVGEYAKSGV 282


>gi|148230557|ref|NP_001080772.1| ribonucleotide reductase M2 polypeptide [Xenopus laevis]
 gi|28839018|gb|AAH47975.1| Rrm2-prov protein [Xenopus laevis]
          Length = 386

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++   ++  A  +E  +  E +P   +G+N
Sbjct: 261 RDEGLHCDFACLMFR-------HLVHKPSEERVVQLITNAVQIEQEFLTEALPVNLIGMN 313

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +FK   NPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 314 CTLMKQYIEFVADRLLLELGFNKVFK-ASNPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 371

Query: 122 LK 123
           + 
Sbjct: 372 MS 373


>gi|255530602|ref|YP_003090974.1| Ribonucleoside-diphosphate reductase [Pedobacter heparinus DSM
           2366]
 gi|255343586|gb|ACU02912.1| Ribonucleoside-diphosphate reductase [Pedobacter heparinus DSM
           2366]
          Length = 324

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F   +   +K        K  Q++   ++ +A  +E  +  + +P   +G+N
Sbjct: 197 RDEGSHCEFACLLYGMLK-------NKLSQEQVHGIIRDAVEIEKEFVTDALPVALIGMN 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R   ++G   ++  T NPF +M E+I L+ + NFFE RV +YQ+   
Sbjct: 250 AKLMSQYIEFVADRWLQELGYSKIYNAT-NPFDFM-EMISLQGKTNFFEKRVGDYQKSGV 307

Query: 122 LK 123
           L 
Sbjct: 308 LT 309


>gi|242777635|ref|XP_002479074.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218722693|gb|EED22111.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 406

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   +    ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHTDFACLLFS-------HLNNRPNPKVIEDIIVDAVAIEQEFLTDALPCSLLGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G +  +  + NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYYN-STNPFDFM-ENISLAGKTNFFEKRVGDYQKAGV 378

Query: 122 LK 123
           + 
Sbjct: 379 MN 380


>gi|49899161|gb|AAH75746.1| Ribonucleotide reductase M2 polypeptide [Danio rerio]
          Length = 386

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL +K  ++  + ++  A  +E  +  + +P   +G+N
Sbjct: 261 RDEGLHCDFACLMFK-------HLISKPSEETVKKIIMNAVEIEQEFLTDALPVKLIGMN 313

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G + +++  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 314 CDLMKQYIEFVADRLLLELGFDKVYR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 371

Query: 122 LK 123
           + 
Sbjct: 372 MS 373


>gi|119174781|ref|XP_001239725.1| hypothetical protein CIMG_09346 [Coccidioides immitis RS]
          Length = 408

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   +  + ++ EA  +E  +  + +P   +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLRHRPGPEAVQAIITEAVEIEKEFLTDALPCALLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G +  +  T NPF +M   I L  + NFFE RV +YQ+   
Sbjct: 325 SKLMCQYIEFVADRLLVALGNKKFYNAT-NPFDFMD-NISLSGKTNFFEKRVGDYQKAGV 382

Query: 122 L 122
           +
Sbjct: 383 M 383


>gi|110636874|ref|YP_677081.1| ribonucleoside-diphosphate reductase 1 subunit beta [Cytophaga
           hutchinsonii ATCC 33406]
 gi|110279555|gb|ABG57741.1| ribonucleoside-diphosphate reductase 1, beta subunit [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 324

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 8/121 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  +       +  K   ++   ++ EA  +E  +  +++P   +G+N
Sbjct: 198 RDEGLHCDFACLLYTKY------INNKLPAERVIQIILEAVEIEKEFVTDSLPVDLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A   +QY++F+A+R    +G+   F  T NPF +M E+I L+ + NFFE RV+EYQ+   
Sbjct: 252 ARLMQQYIEFVADRLLVALGVPKQFNAT-NPFDFM-EMISLQGKTNFFEKRVSEYQKSGV 309

Query: 122 L 122
           +
Sbjct: 310 M 310


>gi|159465835|ref|XP_001691128.1| ribonucleoside-diphosphate reductase small chain [Chlamydomonas
           reinhardtii]
 gi|158279814|gb|EDP05574.1| ribonucleoside-diphosphate reductase small chain [Chlamydomonas
           reinhardtii]
          Length = 394

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +        L T+  + + + ++ EA  +E  +  E +P   +G+N
Sbjct: 267 RDEGLHCDFACMLFSM-------LNTRIDETRVKQIIVEAVEIEQEFCTEALPVDLIGMN 319

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY+QF+A+R    +G    +    NPF +M E+I L+ + NFFE RV +YQ+   
Sbjct: 320 SRLMAQYIQFVADRLLVSLGCAKQYNVV-NPFEFM-EMISLQGKTNFFEKRVGDYQKNGV 377

Query: 122 L 122
           +
Sbjct: 378 M 378


>gi|303314521|ref|XP_003067269.1| ribonucleoside-diphosphate reductase small chain, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|240106937|gb|EER25124.1| ribonucleoside-diphosphate reductase small chain, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|320037571|gb|EFW19508.1| ribonucleoside-diphosphate reductase small subunit [Coccidioides
           posadasii str. Silveira]
          Length = 408

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   +  + ++ EA  +E  +  + +P   +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLRHRPGPEAVQAIITEAVEIEKEFLTDALPCALLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G +  +  T NPF +M   I L  + NFFE RV +YQ+   
Sbjct: 325 SKLMCQYIEFVADRLLVALGNKKFYNAT-NPFDFMD-NISLSGKTNFFEKRVGDYQKAGV 382

Query: 122 L 122
           +
Sbjct: 383 M 383


>gi|76630263|ref|XP_880783.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 3 [Bos
           taurus]
 gi|297480612|ref|XP_002691528.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 2 [Bos
           taurus]
 gi|296482362|gb|DAA24477.1| ribonucleotide reductase M2 polypeptide isoform 2 [Bos taurus]
          Length = 341

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 216 RDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMN 268

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 269 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 326

Query: 122 LK 123
           + 
Sbjct: 327 MS 328


>gi|3220181|gb|AAC23560.1| ribonucleotide reductase M2 subunit [Leishmania amazonensis]
          Length = 354

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N       H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 227 RDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFFE +V EYQ+   
Sbjct: 281 AELMAQYIEFVADRLLVSLGEEKHYNSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAGV 338

Query: 122 LK 123
           + 
Sbjct: 339 MS 340


>gi|73544537|ref|XP_848163.1| ribonucleoside-diphosphate reductase small chain [Leishmania major
           strain Friedlin]
 gi|321438516|emb|CBZ12275.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania major strain Friedlin]
          Length = 388

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N       H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 261 RDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 314

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G E  ++ T+ PF +M E+I L+ + NFFE RV EYQ+   
Sbjct: 315 AELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFFEKRVGEYQKAGV 372

Query: 122 LK 123
           + 
Sbjct: 373 MS 374


>gi|118087248|ref|XP_418364.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 353

 Score =  161 bits (409), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       +L  +  +++ R ++  A  +E  +  E +P G +G+N
Sbjct: 228 RDEGLHCDFACLMFH-------YLVNRPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F + ENPF +M E I L+ + NFFE RV+EYQ+ A 
Sbjct: 281 CTLMKQYIEFVADRLLMELGFSKVF-HAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 338

Query: 122 L 122
           +
Sbjct: 339 M 339


>gi|88682973|gb|AAI05512.1| RRM2 protein [Bos taurus]
          Length = 338

 Score =  161 bits (409), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 213 RDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMN 265

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 266 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 323

Query: 122 LK 123
           + 
Sbjct: 324 MS 325


>gi|226294144|gb|EEH49564.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides
           brasiliensis Pb18]
          Length = 325

 Score =  161 bits (409), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   +  + ++ EA  +E  +  + +P   +G+N
Sbjct: 186 RDEGLHTDFACLLFS-------HLRHRPSPEAVQKIITEAVAIEQEFLTDALPCALLGMN 238

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G + ++  + NPF +M   I L  + NFFE RV +YQ+   
Sbjct: 239 AKLMCQYIEFVADRLLVALGNKKVYN-STNPFDFMD-NISLTGKTNFFEKRVGDYQKAGV 296

Query: 122 L 122
           +
Sbjct: 297 M 297


>gi|312381384|gb|EFR27142.1| hypothetical protein AND_06323 [Anopheles darlingi]
          Length = 390

 Score =  161 bits (409), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 67/121 (55%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++   ++ +A ++E  +  + +P   +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------YLVQKPSRKRVTDIIRDAVMIEQEFLTKALPVDMLGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R   ++G E ++  T+NPF +M E I L+ + NFFE +V EYQ+   
Sbjct: 318 CELMSQYIEFVADRLLVELGCEKVYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQKWGV 375

Query: 122 L 122
           +
Sbjct: 376 M 376


>gi|145349720|ref|XP_001419276.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579507|gb|ABO97569.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 329

 Score =  161 bits (409), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +        L  K  ++  R ++ EA  +E  +  +++P   VG+N
Sbjct: 201 RDEGLHRDFACLLFSM-------LNNKPSEETIRKIVTEAVEIEKEFVCDSLPCALVGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A     Y++++A+     +GL   +  T NPF WM E+I L+ + NFFE RV EYQ+   
Sbjct: 254 AGMMSDYIEYVADHLFCSLGLAKEYN-TTNPFDWM-ELISLQGKTNFFEKRVGEYQKAGV 311

Query: 122 LK 123
           + 
Sbjct: 312 MN 313


>gi|149728153|ref|XP_001502384.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase subunit
           M2 (Ribonucleotide reductase small subunit)
           (Ribonucleotide reductase small chain) [Equus caballus]
          Length = 425

 Score =  161 bits (409), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 300 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIIINAVRIEQEFLTEALPVRLIGMN 352

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 353 CALMKQYIEFVADRLLLELGFNKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 410

Query: 122 LK 123
           + 
Sbjct: 411 MS 412


>gi|169613737|ref|XP_001800285.1| hypothetical protein SNOG_10001 [Phaeosphaeria nodorum SN15]
 gi|111061216|gb|EAT82336.1| hypothetical protein SNOG_10001 [Phaeosphaeria nodorum SN15]
          Length = 409

 Score =  161 bits (409), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + +        L T+  +   + ++ EA  +E  +  E +P   +G+N
Sbjct: 267 RDEGMHTDFACLLFSL-------LNTRPSKDAVKAIITEAVEIEQEFLTEALPCALLGMN 319

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G   ++  T NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 320 STLMCQYIEFVADRLLLALGNTKVYNAT-NPFDFM-ENISLAGKTNFFEKRVGDYQKAGV 377

Query: 122 L 122
           +
Sbjct: 378 M 378


>gi|3914644|sp|O46310|RIR2_LEIAM RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
           AltName: Full=Ribonucleotide reductase M2 subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2828563|gb|AAC08302.1| ribonucleotide reductase M2 subunit [Leishmania amazonensis]
          Length = 345

 Score =  161 bits (409), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N       H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 218 RDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G E  ++ T+ PF +M E+I L+ + NFFE RV EYQ+   
Sbjct: 272 AELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFFEKRVGEYQKAGV 329

Query: 122 LK 123
           + 
Sbjct: 330 MS 331


>gi|302409182|ref|XP_003002425.1| ribonucleoside-diphosphate reductase small chain [Verticillium
           albo-atrum VaMs.102]
 gi|261358458|gb|EEY20886.1| ribonucleoside-diphosphate reductase small chain [Verticillium
           albo-atrum VaMs.102]
          Length = 414

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q  + ++ +A  +E  +  E +P G +G+N
Sbjct: 276 RDEGLHTDFACLLFS-------HLNNRPSKQTVQDIVTDAVNIEQEFLTEALPCGLLGMN 328

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A   +QY++F+A+R    +G E ++K T NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 329 ATLMKQYIEFVADRLLVALGNEKVYKAT-NPFDFM-ENISLGGKTNFFEKRVADYQKAGV 386

Query: 122 L 122
           +
Sbjct: 387 M 387


>gi|301772278|ref|XP_002921557.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Ailuropoda melanoleuca]
          Length = 393

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ R ++  A  +E  +  E +P   +G+N
Sbjct: 268 RDEGLHCDFACLMFK-------HLVHKPSEQRVREIIINAVRIEQEFLTEALPVKLIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 321 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 378

Query: 122 LK 123
           + 
Sbjct: 379 MS 380


>gi|289620013|emb|CBI53457.1| unnamed protein product [Sordaria macrospora]
          Length = 410

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q  + ++ +A  +E  +  E +P   +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLNNRPSKQLIQDIIVDAVRIEQEFLTEALPCALLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A   +QY++F+A+R    +G E +++ + NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 325 ADLMKQYIEFVADRLLVALGNEKVYR-STNPFDFM-ENISLGGKTNFFEKRVADYQKAGV 382

Query: 122 LK 123
           + 
Sbjct: 383 MN 384


>gi|7106399|ref|NP_033130.1| ribonucleoside-diphosphate reductase subunit M2 [Mus musculus]
 gi|132626|sp|P11157|RIR2_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|22218698|pdb|1H0N|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase
           To Model The Reactive Diferrous State
 gi|22218699|pdb|1H0O|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase
           To Model The Reactive Diferrous State
 gi|52696260|pdb|1W68|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase
           Subunit R2 Under Oxidizing Conditions. A Fully Occupied
           Dinuclear Iron Cluster.
 gi|52696261|pdb|1W69|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase
           Subunit R2 Under Reducing Conditions. A Fully Occupied
           Dinuclear Iron Cluster And Bound Acetate.
 gi|157834262|pdb|1XSM|A Chain A, Protein R2 Of Ribonucleotide Reductase From Mouse
 gi|50720|emb|CAA33707.1| M2 ribonucleotide reductase [Mus musculus]
 gi|200768|gb|AAA40062.1| ribonucleotide reductase subunit M2 [Mus musculus]
 gi|26354034|dbj|BAC40647.1| unnamed protein product [Mus musculus]
 gi|54887418|gb|AAH85136.1| Ribonucleotide reductase M2 [Mus musculus]
 gi|74139292|dbj|BAE40793.1| unnamed protein product [Mus musculus]
 gi|74151119|dbj|BAE27683.1| unnamed protein product [Mus musculus]
 gi|74179887|dbj|BAE36508.1| unnamed protein product [Mus musculus]
 gi|74188932|dbj|BAE39238.1| unnamed protein product [Mus musculus]
 gi|74189151|dbj|BAE39331.1| unnamed protein product [Mus musculus]
 gi|74206394|dbj|BAE24918.1| unnamed protein product [Mus musculus]
 gi|74211991|dbj|BAE40165.1| unnamed protein product [Mus musculus]
          Length = 390

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ R ++  A  +E  +  E +P   +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPAEQRVREIITNAVRIEQEFLTEALPVKLIGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 375

Query: 122 LK 123
           + 
Sbjct: 376 MS 377


>gi|293343290|ref|XP_002725449.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like [Rattus
           norvegicus]
 gi|293355176|ref|XP_002728627.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Rattus
           norvegicus]
          Length = 390

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIITNAVRIEQEFLTEALPVKLIGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +FK  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIFK-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 375

Query: 122 LK 123
           + 
Sbjct: 376 MS 377


>gi|145249942|ref|XP_001401310.1| ribonucleoside-diphosphate reductase small chain [Aspergillus niger
           CBS 513.88]
 gi|134081995|emb|CAK46680.1| unnamed protein product [Aspergillus niger]
          Length = 396

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q    ++ EA  +E  +  + +P   +G+N
Sbjct: 263 RDEGLHTDFACLLFS-------HLNNRPSKQVVEDIIVEAVGIEQEFLTDALPVALLGMN 315

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G +  +  T NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 316 SKLMCQYIEFVADRLLVALGNKKYYNAT-NPFDFM-ESISLAGKTNFFEKRVGDYQKAGV 373

Query: 122 L 122
           +
Sbjct: 374 M 374


>gi|116191729|ref|XP_001221677.1| hypothetical protein CHGG_05582 [Chaetomium globosum CBS 148.51]
 gi|88181495|gb|EAQ88963.1| hypothetical protein CHGG_05582 [Chaetomium globosum CBS 148.51]
          Length = 409

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q    ++ +A  +E  +  E +P   +G+N
Sbjct: 271 RDEGLHTDFACLLFS-------HLNNRPSKQIIEDIIVDAVRIEQEFLTEALPCALLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +   +QY++F+A+R    +G E +++ + NPF +M E I L  + NFFE RV EYQ+   
Sbjct: 324 SNLMKQYIEFVADRLLVALGNEKVYR-STNPFDFM-ENISLGGKTNFFEKRVGEYQKAGV 381

Query: 122 L 122
           +
Sbjct: 382 M 382


>gi|295670491|ref|XP_002795793.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides
           brasiliensis Pb01]
 gi|226284878|gb|EEH40444.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides
           brasiliensis Pb01]
          Length = 325

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   +  + ++ EA  +E  +  + +P   +G+N
Sbjct: 186 RDEGLHTDFACLLFS-------HLRHRPSPEAVQKIITEAVAIEQEFLTDALPCALLGMN 238

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G + ++  + NPF +M   I L  + NFFE RV +YQ+   
Sbjct: 239 AKLMCQYIEFVADRLLVALGNKKVYN-STNPFDFMD-NISLTGKTNFFEKRVGDYQKAGV 296

Query: 122 L 122
           +
Sbjct: 297 M 297


>gi|85109237|ref|XP_962820.1| ribonucleoside-diphosphate reductase M2 subunit [Neurospora crassa
           OR74A]
 gi|30316285|sp|Q9C167|RIR2_NEUCR RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|16273691|gb|AAK14804.2| small subunit of ribonucleotide reductase [Neurospora crassa]
 gi|28924456|gb|EAA33584.1| ribonucleoside-diphosphate reductase M2 subunit [Neurospora crassa
           OR74A]
          Length = 410

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q  + ++ +A  +E  +  E +P   +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLNNRPSKQLIQEIIVDAVRIEQEFLTEALPCALLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A   +QY++F+A+R    +G E +++ + NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 325 ADLMKQYIEFVADRLLVALGNEKIYR-STNPFDFM-ENISLGGKTNFFEKRVGDYQKAGV 382

Query: 122 LK 123
           + 
Sbjct: 383 MN 384


>gi|110763195|ref|XP_397443.3| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 isoform
           1 [Apis mellifera]
          Length = 384

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 9/123 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  K   ++  +++ +A  +E  +  + +P   +G+N
Sbjct: 259 RDEGLHCDFACLMFK-------HIVQKPSCERVTSIIKDAVKIEQEFLTDALPVEMIGMN 311

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R   ++G + ++  +ENPF +M E I L+ + NFFE +V EYQ+   
Sbjct: 312 CKLMCQYIEFVADRLLVELGCKKIY-MSENPFDFM-EHISLEGKTNFFEKKVGEYQKWGV 369

Query: 122 LKW 124
           ++ 
Sbjct: 370 MQD 372


>gi|148232385|ref|NP_001085389.1| ribonucleotide reductase M2, gene 1 [Xenopus laevis]
 gi|48735122|gb|AAH72071.1| MGC78958 protein [Xenopus laevis]
          Length = 406

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 40/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  K  +Q+ R ++ +A  +E  +  E +P   +G+N
Sbjct: 281 RDEGLHTDFACLLFK-------HVVHKPSEQRVREIIIDAVKIEQEFLTEALPVELIGMN 333

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G + +FK +ENPF +M E I L+ + NFFE +V EYQ+   
Sbjct: 334 CTLMKQYIEFVADRLLLELGFKKIFK-SENPFDFM-ENISLEGKTNFFEKKVGEYQKMGV 391

Query: 122 L 122
           +
Sbjct: 392 M 392


>gi|328855581|gb|EGG04707.1| hypothetical protein MELLADRAFT_49061 [Melampsora larici-populina
           98AG31]
          Length = 385

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +    PH  T       + ++ +A  +E  +  + +P   +G+N
Sbjct: 248 RDEGLHTDFACLLFSHL-ERRPHPDT------VQAIISQAVEIEKEFLSDALPCKLIGMN 300

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G +  +   ENPF +M E+I L  + NFFE RV++Y +   
Sbjct: 301 ADLMCQYIEFVADRLLVALGNDKFYN-AENPFDFM-EMISLSGKTNFFEKRVSDYAKAGV 358

Query: 122 LK 123
           + 
Sbjct: 359 MT 360


>gi|301774462|ref|XP_002922647.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           [Ailuropoda melanoleuca]
          Length = 387

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++  A  +E  +  E +P G +G+N
Sbjct: 262 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 314

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+ A 
Sbjct: 315 CVLMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVAEYQRFAV 372

Query: 122 L 122
           +
Sbjct: 373 M 373


>gi|74207686|dbj|BAE40088.1| unnamed protein product [Mus musculus]
          Length = 390

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ R ++  A  +E  +  E +P   +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPAEQRVREIITNAVRIEQEFLTEALPVKLIGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 375

Query: 122 LK 123
           + 
Sbjct: 376 MS 377


>gi|326437649|gb|EGD83219.1| ribonucleotide reductase M2 B [Salpingoeca sp. ATCC 50818]
          Length = 408

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 68/121 (56%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +  + P       +++   ++ +A  +E  +  E +P   +G+N
Sbjct: 280 RDEGLHCDFACLMFSMLHKKPP-------KERVIGIIMDAVEIEQEFLTEALPVSLLGMN 332

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    +Y++F+++R    +G + ++  T NPFP+M E I ++ + NFFE RV+EYQ+   
Sbjct: 333 STLMREYIEFVSDRLLVSLGYDKVYNAT-NPFPFM-ENISIEGKTNFFERRVSEYQKSGV 390

Query: 122 L 122
           +
Sbjct: 391 M 391


>gi|8101697|gb|AAF72618.1|AF252539_2 ribonucleotide reductase small subunit M2 [Leishmania amazonensis]
          Length = 345

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N       H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 218 RDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G E  ++ T+ PF +M E+I L+ + NFFE RV EYQ+   
Sbjct: 272 AELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFFEKRVGEYQKAGV 329

Query: 122 LK 123
           + 
Sbjct: 330 MS 331


>gi|327403795|ref|YP_004344633.1| Ribonucleoside-diphosphate reductase [Fluviicola taffensis DSM
           16823]
 gi|327319303|gb|AEA43795.1| Ribonucleoside-diphosphate reductase [Fluviicola taffensis DSM
           16823]
          Length = 324

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 67/122 (54%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  +      HL  +  +++ + ++ +A  +E  +  + +P   +G+N
Sbjct: 198 RDEGLHCDFACLLYTK------HLIHQLSKEQVQEIILDAVEIEKEFVTDALPVKLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R   ++G   +F  T NPF +M  +I ++ + NFFE RV EYQ+   
Sbjct: 252 ADLMAQYIEFVADRLLTELGNPKVFN-TTNPFDFMD-MISIQGKTNFFEKRVAEYQKSGV 309

Query: 122 LK 123
           + 
Sbjct: 310 MS 311


>gi|301097698|ref|XP_002897943.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
           infestans T30-4]
 gi|262106388|gb|EEY64440.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
           infestans T30-4]
          Length = 360

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 32/120 (26%), Positives = 65/120 (54%), Gaps = 9/120 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + +++  + P         +   ++ +A  +E  +  +++P   +G+N
Sbjct: 235 RDEGMHTDFACLMYSKLVNKLPE-------SRVHEIIRDAVAIEHEFVCDSLPVELIGMN 287

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R  + +G+  ++   +NPF WM  +I L+ + NFFE RV EY +   
Sbjct: 288 SALMCQYIEFVADRLLYSLGVSKIYN-VKNPFDWMD-MISLQGKTNFFEKRVGEYSKAGV 345


>gi|156387377|ref|XP_001634180.1| predicted protein [Nematostella vectensis]
 gi|156221260|gb|EDO42117.1| predicted protein [Nematostella vectensis]
          Length = 341

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  ++  R ++ +A ++E  +    +P   +G+N
Sbjct: 216 RDEGLHCDFACLMYK-------YLVNKPDEETVRGIIKDAVVIEQEFLTSALPVKLIGMN 268

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +  + ++   ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 269 CALMRQYIEFVADRLLVALNCQKVYN-VENPFDFM-ENISLEGKTNFFEKRVGEYQKSGV 326

Query: 122 LK 123
           + 
Sbjct: 327 MS 328


>gi|76630259|ref|XP_584910.2| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos
           taurus]
 gi|297480610|ref|XP_002691527.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos
           taurus]
 gi|296482361|gb|DAA24476.1| ribonucleotide reductase M2 polypeptide isoform 1 [Bos taurus]
          Length = 389

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 264 RDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMN 316

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 317 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 374

Query: 122 LK 123
           + 
Sbjct: 375 MS 376


>gi|322709430|gb|EFZ01006.1| ribonucleoside-diphosphate reductase M2 subunit [Metarhizium
           anisopliae ARSEF 23]
          Length = 414

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +       + HL  +  +Q    ++ +A  +E  +  E +P   +G+N
Sbjct: 276 RDEGLHTDFACLL-------HSHLKNRASKQVIYDIITDAVAIEQEFLTEALPCALLGMN 328

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +   +QY++F+A+R    +G E ++K T NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 329 SNLMKQYIEFVADRLLVALGNEKVYK-TSNPFDFM-ENISLGGKTNFFEKRVGDYQKAGV 386

Query: 122 L 122
           L
Sbjct: 387 L 387


>gi|146090970|ref|XP_001466408.1| ribonucleoside-diphosphate reductase small chain [Leishmania
           infantum JPCM5]
 gi|134070770|emb|CAM69127.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania infantum JPCM5]
          Length = 388

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N       H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 261 RDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 314

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G E  ++ T+ PF +M E+I L+ + NFFE +V EYQ+   
Sbjct: 315 AELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAGV 372

Query: 122 LK 123
           + 
Sbjct: 373 MS 374


>gi|45360749|ref|NP_989048.1| ribonucleotide reductase M2, gene 1 [Xenopus (Silurana) tropicalis]
 gi|38174078|gb|AAH61353.1| ribonucleotide reductase M2 polypeptide [Xenopus (Silurana)
           tropicalis]
          Length = 378

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 69/122 (56%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  K  +Q+ R ++ +A  +E  +  E +P   +G+N
Sbjct: 253 RDEGLHTDFACLLFK-------HVVHKPSEQRVREIIIDAVKIEQEFLTEALPVELIGMN 305

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G + +FK +ENPF +M E I L+ + NFFE +V EYQ+   
Sbjct: 306 CKLMKQYIEFVADRLLLELGFKKIFK-SENPFDFM-ENISLEGKTNFFEKKVAEYQKMGV 363

Query: 122 LK 123
           + 
Sbjct: 364 MS 365


>gi|302843870|ref|XP_002953476.1| hypothetical protein VOLCADRAFT_109884 [Volvox carteri f.
           nagariensis]
 gi|300261235|gb|EFJ45449.1| hypothetical protein VOLCADRAFT_109884 [Volvox carteri f.
           nagariensis]
          Length = 400

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +         +  + + + ++ EA  +E  +  + +P   +G+N
Sbjct: 273 RDEGLHCDFACLLYGMLSK-------QLEESRIKEIICEAVDIENEFCTDALPVDLIGMN 325

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G    +  T NPF +M  +I L+ + NFFE RV +YQ+   
Sbjct: 326 SRLMAQYIEFVADRLLVALGCSKAYNVT-NPFDFMD-MISLQGKTNFFEKRVGDYQKSGV 383

Query: 122 L 122
           +
Sbjct: 384 M 384


>gi|321476700|gb|EFX87660.1| hypothetical protein DAPPUDRAFT_306462 [Daphnia pulex]
          Length = 378

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++   +++ A  +E  +  + +P   +G+N
Sbjct: 251 RDEGLHTDFACVMFK-------HLVNKPPKERIIEIINNAVKIEQEFLTDALPVEMIGMN 303

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R   ++G   L+  +ENPF +M E I L+ + NFFE +V EYQ+   
Sbjct: 304 CRLMRQYIEFVADRLLLELGCTKLYN-SENPFDFM-EHISLEGKTNFFEKKVGEYQKAGV 361

Query: 122 LK 123
           + 
Sbjct: 362 MN 363


>gi|115387427|ref|XP_001211219.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
           terreus NIH2624]
 gi|114195303|gb|EAU37003.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
           terreus NIH2624]
          Length = 401

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q    ++ EA  +E  +  + +P   +G+N
Sbjct: 267 RDEGLHTDFACLLFS-------HLNNRPSKQVVEDIIVEAVAIEKEFLTDALPVALLGMN 319

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G    F ++ NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 320 SKLMCQYIEFVADRLLVALGNNKYF-HSTNPFDFM-ESISLAGKTNFFEKRVGDYQKAGV 377

Query: 122 L 122
           +
Sbjct: 378 M 378


>gi|300676950|gb|ADK26821.1| ribonucleotide reductase M2 [Zonotrichia albicollis]
          Length = 390

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A L+E  +  E +P   +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLIHKPSEERVREIIMNAVLIEQEFLTEALPVKLIGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 375

Query: 122 LK 123
           + 
Sbjct: 376 MS 377


>gi|145537171|ref|XP_001454302.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124422057|emb|CAK86905.1| unnamed protein product [Paramecium tetraurelia]
          Length = 507

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  K   Q+   ++  A  +E  +  E +P   +G+N
Sbjct: 382 RDEGLHTDFACLLYK-------HMINKLSIQRVHEIISSAVEIEKEFISEALPVELIGMN 434

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +   +QY++F+A+R    +G   ++  ++NPF WM  +I L+ + NFFE RV +YQ+   
Sbjct: 435 SNLMKQYIEFVADRLIFALGAPKIYN-SKNPFEWMD-MISLQGKTNFFERRVGDYQKAGV 492

Query: 122 LK 123
           + 
Sbjct: 493 MS 494


>gi|75076588|sp|Q4R741|RIR2B_MACFA RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B
 gi|67969468|dbj|BAE01083.1| unnamed protein product [Macaca fascicularis]
          Length = 351

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVQIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F   ENPF +M E I L+ + NFFE RV+EYQ+ A 
Sbjct: 279 CILMKQYIEFVADRLLVELGFSKIF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336

Query: 122 L 122
           +
Sbjct: 337 M 337


>gi|47213105|emb|CAF89525.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 198

 Score =  160 bits (407), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K   Q    ++  A  +E  +  E +P   +G+N
Sbjct: 73  RDEGLHCDFACLMFK-------HLLHKPSAQTVGAIIRNAVEIEQEFLTEALPVKLIGMN 125

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               ++Y++F+A+R   ++G   +++  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 126 CQLMKRYIEFVADRLLLELGFAKIYR-AENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 183

Query: 122 L 122
           +
Sbjct: 184 M 184


>gi|225561749|gb|EEH10029.1| ribonucleotide reductase M2 B [Ajellomyces capsulatus G186AR]
 gi|240275354|gb|EER38868.1| ribonucleoside-diphosphate reductase subunit small [Ajellomyces
           capsulatus H143]
 gi|325091193|gb|EGC44503.1| ribonucleoside-diphosphate reductase subunit small [Ajellomyces
           capsulatus H88]
          Length = 413

 Score =  160 bits (407), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   +    ++ EA  +E  +  + +P   +G+N
Sbjct: 274 RDEGLHTDFACLLFS-------HLRHRPSPEAVEKIITEAVTIEQEFLSDALPVALLGMN 326

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G + ++  + NPF +M   I L  + NFFE RV +YQ+   
Sbjct: 327 AKLMCQYIEFVADRLLVALGNKKVYN-STNPFDFMD-NISLAGKTNFFEKRVGDYQKAGV 384

Query: 122 L 122
           +
Sbjct: 385 M 385


>gi|75076796|sp|Q4R7Q7|RIR2_MACFA RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|67969020|dbj|BAE00865.1| unnamed protein product [Macaca fascicularis]
          Length = 389

 Score =  160 bits (406), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 264 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRVEQEFLTEALPVKLIGMN 316

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 317 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 374

Query: 122 LK 123
           + 
Sbjct: 375 MS 376


>gi|73979721|ref|XP_540076.2| PREDICTED: similar to Ribonucleoside-diphosphate reductase M2 chain
           (Ribonucleotide reductase small chain) isoform 1 [Canis
           familiaris]
          Length = 394

 Score =  160 bits (406), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 269 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIIINAVRIEQEFLTEALPVKLIGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 322 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 379

Query: 122 LK 123
           + 
Sbjct: 380 MS 381


>gi|213511642|ref|NP_001133495.1| Ribonucleoside-diphosphate reductase subunit M2 [Salmo salar]
 gi|209154228|gb|ACI33346.1| Ribonucleoside-diphosphate reductase subunit M2 [Salmo salar]
          Length = 387

 Score =  160 bits (406), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  ++    ++  A  +E  +  + +P   +G+N
Sbjct: 262 RDEGLHCDFACLMFK-------HLVHKPSKETVTKLIRNAVEIEQEFLTKALPVKLIGMN 314

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R   ++G + +++  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 315 CDLMTQYIEFVADRLMLELGFDKIYR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 372

Query: 122 LK 123
           + 
Sbjct: 373 MS 374


>gi|296421312|ref|XP_002840209.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636423|emb|CAZ84400.1| unnamed protein product [Tuber melanosporum]
          Length = 397

 Score =  160 bits (406), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N       HL  +  QQ  + ++ EA  +E  +  E +P   +G+N
Sbjct: 262 RDEGLHTDFACLLFN-------HLNNRPSQQAVQDIIVEAVGIEQEFLTEALPCALLGMN 314

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +   +QY++F+A+R    +G    +  T NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 315 SKLMKQYIEFVADRLLLSLGNPKFYNAT-NPFDFM-ESISLAGKTNFFEKRVGDYQKAGV 372

Query: 122 L 122
           +
Sbjct: 373 M 373


>gi|223996990|ref|XP_002288168.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975276|gb|EED93604.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 335

 Score =  160 bits (406), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 9/120 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +++  + P         +   ++  A  +E  +  + +P   +G+N
Sbjct: 210 RDEGLHCDFACLIYSKLVNQLPE-------SRIEEIITNAVEIEKEFVSDALPVELIGMN 262

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F A+R    +G +  +    NPF WM E+I L+ + NFFE RV EY +   
Sbjct: 263 SKLMCQYIEFCADRLLGALGCKKHYMAV-NPFEWM-EMISLQGKTNFFEKRVGEYAKSGV 320


>gi|326403282|ref|YP_004283363.1| ribonucleoside-diphosphate reductase beta subunit [Acidiphilium
           multivorum AIU301]
 gi|325050143|dbj|BAJ80481.1| ribonucleoside-diphosphate reductase beta subunit [Acidiphilium
           multivorum AIU301]
          Length = 338

 Score =  160 bits (406), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
           +RDESLH N  I +      ENP +WT+E +++           E A+           G
Sbjct: 208 VRDESLHCNSVIKLFRTFVAENPEIWTEELRREIYLCCATIVDHEDAFIDLAFEFGAVEG 267

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A   ++Y+++IA+RR  Q+GL PLF   +NP PW+ E+++  +  NFFE R TEY + 
Sbjct: 268 LTAEEVKRYIRYIADRRLLQLGLNPLFHVDKNPLPWLDEMLNAVEHTNFFENRATEYSKA 327

Query: 120 A-ELKWD 125
           +    WD
Sbjct: 328 STAGSWD 334


>gi|148259750|ref|YP_001233877.1| ribonucleotide-diphosphate reductase subunit beta [Acidiphilium
           cryptum JF-5]
 gi|146401431|gb|ABQ29958.1| Ribonucleoside-diphosphate reductase [Acidiphilium cryptum JF-5]
          Length = 338

 Score =  160 bits (406), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
           +RDESLH N  I +      ENP +WT+E +++           E A+           G
Sbjct: 208 VRDESLHCNSVIKLFRTFVAENPEIWTEELRREIYLCCATIVDHEDAFIDLAFEFGAVEG 267

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A   ++Y+++IA+RR  Q+GL PLF   +NP PW+ E+++  +  NFFE R TEY + 
Sbjct: 268 LTAEEVKRYIRYIADRRLLQLGLNPLFHVDKNPLPWLDEMLNAVEHTNFFENRATEYSKA 327

Query: 120 A-ELKWD 125
           +    WD
Sbjct: 328 STAGSWD 334


>gi|148234092|ref|NP_001079369.1| ribonucleotide reductase M2 B (TP53 inducible) [Xenopus laevis]
 gi|27371032|gb|AAH41209.1| MGC52676 protein [Xenopus laevis]
          Length = 386

 Score =  160 bits (406), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +         K  +++   ++ +A  +E  +  E +P   +G+N
Sbjct: 261 RDEGLHCDFACLMFKHLIR-------KPSEERVVELITDAVQIEQEFLTEALPVNLIGMN 313

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G + +FK T NPF +M E I L+ + NFFE +V EYQ+   
Sbjct: 314 CTLMKQYIEFVADRLLLELGFKKVFKAT-NPFDFM-ENISLEGKTNFFEKKVGEYQKMGV 371

Query: 122 LK 123
           + 
Sbjct: 372 MS 373


>gi|118383611|ref|XP_001024960.1| ribonucleoside-diphosphate reductase, beta subunit family protein
           [Tetrahymena thermophila]
 gi|89306727|gb|EAS04715.1| ribonucleoside-diphosphate reductase, beta subunit family protein
           [Tetrahymena thermophila SB210]
          Length = 376

 Score =  160 bits (406), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +         K  +++   ++ EA  +E  +  E +P   +G+N
Sbjct: 251 RDEGLHTDFACLLYSMLNK-------KLTKEEIYEIITEAVEIEKEFISEALPVELIGMN 303

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +   +QY++F+A+R    +G+   +  ++NPF WM  +I ++ + NFFE RV EYQ+   
Sbjct: 304 SNMMKQYLEFVADRLLFALGVPKFYN-SKNPFEWMD-MISIQGKTNFFEKRVGEYQKANV 361

Query: 122 LK 123
           + 
Sbjct: 362 MS 363


>gi|4894211|gb|AAD32302.1| ribonucleotide reductase small subunit [Glycine max]
          Length = 339

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++             +   ++HEA  +E  +  + +P   +G+N
Sbjct: 210 RDEGLHCDFACLLYSLLRK-------PLISDQVHKLVHEAVEIETEFVCDALPCALIGMN 262

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G +  +   ENPF WM E I L+ + NFFE RV +YQ+ + 
Sbjct: 263 SVLMSQYIKFVADRLLVALGYQRKYN-VENPFDWM-EFISLQGKANFFERRVGDYQKASV 320

Query: 122 LK 123
           + 
Sbjct: 321 MS 322


>gi|258567064|ref|XP_002584276.1| ribonucleoside-diphosphate reductase small chain [Uncinocarpus
           reesii 1704]
 gi|237905722|gb|EEP80123.1| ribonucleoside-diphosphate reductase small chain [Uncinocarpus
           reesii 1704]
          Length = 401

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + I+        +        ++ EA  +E  +  + +P   +G+N
Sbjct: 265 RDEGLHTDFACLLFSHIRH-------RPTPAAVEAIITEAVEIEKEFLTDALPCALLGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G +  + +  NPF +M   I L  + NFFE RV +YQ+   
Sbjct: 318 SKLMCQYIEFVADRLLVALGNKKFY-HATNPFDFMD-NISLAGKTNFFEKRVGDYQKAGV 375

Query: 122 L 122
           +
Sbjct: 376 M 376


>gi|149279601|ref|ZP_01885730.1| ribonucleoside-diphosphate reductase 1, beta subunit [Pedobacter
           sp. BAL39]
 gi|149229637|gb|EDM35027.1| ribonucleoside-diphosphate reductase 1, beta subunit [Pedobacter
           sp. BAL39]
          Length = 324

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F   + + +K        K  ++    ++ +A  +E  +  + +P   +G+N
Sbjct: 197 RDEGSHCEFACLLYSMLK-------NKLSEEHVHGIIRDAVEIEKEFVTDALPVALIGMN 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R   ++G   ++ +  NPF +M E+I L+ + NFFE RV +YQ+   
Sbjct: 250 AKLMSQYIEFVADRWLQELGYTKIY-HATNPFDFM-EMISLQGKTNFFEKRVGDYQKSGV 307

Query: 122 LK 123
           L 
Sbjct: 308 LT 309


>gi|118089009|ref|XP_001231545.1| PREDICTED: similar to small subunit ribonucleotide reductase
           isoform 1 [Gallus gallus]
          Length = 392

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +         K  +++ + ++  A L+E  +  E +P   +G+N
Sbjct: 267 RDEGLHCDFACLMFKHLIR-------KPSEERVKEIIMNAVLIEQEFLTEALPVKLIGMN 319

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 320 CTLMKQYIEFVADRLMLELGFRKIYK-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 377

Query: 122 LK 123
           + 
Sbjct: 378 MS 379


>gi|310798394|gb|EFQ33287.1| ribonucleotide reductase [Glomerella graminicola M1.001]
          Length = 413

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q  + ++ +A  +E  +  E +P   +G+N
Sbjct: 275 RDEGLHTDFACLLYS-------HLKNRPSKQVIQDIIVDAVQIEQEFLTEALPCALLGMN 327

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +   +QY++F+A+R    +G + ++K + NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 328 SNLMKQYIEFVADRLLVALGNDKVYK-SSNPFDFM-ENISLGGKTNFFEKRVADYQKAGV 385

Query: 122 LK 123
           + 
Sbjct: 386 MN 387


>gi|266919|sp|P29883|RIR2_VACCP RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|335710|gb|AAA48294.1| F14 [Vaccinia virus]
          Length = 319

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305

Query: 122 LK 123
           + 
Sbjct: 306 MS 307


>gi|56713400|gb|AAW23440.1| ribonucleoside-diphosphate reductase [Vaccinia virus]
 gi|56713684|gb|AAW23722.1| ribonucleoside-diphosphate reductase [Vaccinia virus]
 gi|88854075|gb|ABD52493.1| ribonucleoside-diphosphate reductase subunit [Vaccinia virus]
 gi|167412519|gb|ABZ79953.1| ribonucleotide reductase small subunit [Vaccinia virus GLV-1h68]
          Length = 319

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305

Query: 122 LK 123
           + 
Sbjct: 306 MS 307


>gi|119478853|ref|XP_001259462.1| ribonucleotide reductase small subunit RnrA, putative [Neosartorya
           fischeri NRRL 181]
 gi|119407616|gb|EAW17565.1| ribonucleotide reductase small subunit RnrA, putative [Neosartorya
           fischeri NRRL 181]
          Length = 405

 Score =  160 bits (405), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  ++    ++ EA  +E  +  E +P   +G+N
Sbjct: 268 RDEGLHTDFACLLFS-------HLNHRPDKKVVEDIIVEAVAIEQEFLTEALPVALLGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G +  +  + NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYYN-SSNPFDFM-ESISLAGKTNFFEKRVGDYQKAGV 378

Query: 122 L 122
           +
Sbjct: 379 M 379


>gi|20178418|ref|NP_619839.1| CPXV051 protein [Cowpox virus]
 gi|20153036|gb|AAM13497.1|AF482758_48 CPXV051 protein [Cowpox virus]
          Length = 333

 Score =  160 bits (405), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 209 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 262 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 319

Query: 122 LK 123
           + 
Sbjct: 320 MS 321


>gi|10432587|dbj|BAB13815.1| ribonucleotide reductase small subunit [Lentinula edodes]
          Length = 418

 Score =  160 bits (405), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 9/120 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + + ++   PH  T         ++ EA  +E  +  + +P   +G+N
Sbjct: 287 RDEGMHTDFACLLFSHLR-RRPHPDT------VERIIKEAVAIEQEFLTDALPVSLIGMN 339

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G + L+  + NPF +M  +I L+ + NFFE RV++Y +   
Sbjct: 340 ATLMCQYIEFVADRLLVALGNKKLYN-STNPFDFMD-MISLQGKTNFFEKRVSDYSKAGV 397


>gi|10344|emb|CAA26307.1| unnamed protein product [Spisula solidissima]
          Length = 300

 Score =  160 bits (405), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K  Q++   ++ EA  +E  +  E +P   +G+N
Sbjct: 172 RDEGLHCDFACLMFS-------HLVNKPSQERIHQIIDEAVKIEQVFLTEALPCRLIGMN 224

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R   ++  + L+   ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 225 CDLMRQYIEFVADRLLLELKCDKLYN-KENPFDFM-EHISLEGKTNFFEKRVGEYQKMGV 282

Query: 122 LK 123
           + 
Sbjct: 283 MS 284


>gi|70997335|ref|XP_753417.1| ribonucleotide reductase small subunit RnrA [Aspergillus fumigatus
           Af293]
 gi|66851053|gb|EAL91379.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           fumigatus Af293]
 gi|159126856|gb|EDP51972.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           fumigatus A1163]
          Length = 405

 Score =  160 bits (405), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  ++    ++ EA  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHTDFACLLFS-------HLNHRPDKKVIEDIIVEAVAIEQEFLTDALPVALLGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G +  F  + NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYFN-SPNPFDFM-ESISLAGKTNFFEKRVGDYQKAGV 378

Query: 122 L 122
           +
Sbjct: 379 M 379


>gi|327269406|ref|XP_003219485.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           [Anolis carolinensis]
          Length = 414

 Score =  160 bits (405), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++  A  +E  +  E +P G +G+N
Sbjct: 289 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 341

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A 
Sbjct: 342 CTLMKQYIEFVADRLLLELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 399

Query: 122 L 122
           +
Sbjct: 400 M 400


>gi|326797773|ref|YP_004315592.1| ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
 gi|326548537|gb|ADZ76922.1| Ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
          Length = 323

 Score =  160 bits (405), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 67/120 (55%), Gaps = 9/120 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F   + + ++ + P       +++ + ++ +A  +E  +  + +P   +G+N
Sbjct: 198 RDEGLHCEFACLLYSMLEAKLP-------KERVQEIIIDAVEIEKEFITDALPVKLIGMN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A   +QY++F+A+R   ++G    +  T NPF +M E+I L+ + NFFE RV +YQ+   
Sbjct: 251 ADLMKQYIEFVADRWLVELGNSKYYNAT-NPFDFM-ELISLQGKTNFFEKRVGDYQKSGV 308


>gi|67515571|ref|XP_657671.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4]
 gi|40746089|gb|EAA65245.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4]
 gi|259489743|tpe|CBF90266.1| TPA: Ribonucleotide reductase [Source:UniProtKB/TrEMBL;Acc:Q9HEW8]
           [Aspergillus nidulans FGSC A4]
          Length = 406

 Score =  160 bits (405), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  ++    ++ EA  +E  +  + +P   +G+N
Sbjct: 269 RDEGLHTDFACLLFS-------HLNWRPSKKVVEDIIVEAVAIEKEFLTDALPCALLGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G +  F  T NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 322 AKLMCQYIEFVADRLLVALGNKKYFNAT-NPFDFM-ESISLAGKTNFFEKRVGDYQKAGV 379

Query: 122 L 122
           +
Sbjct: 380 M 380


>gi|41054952|ref|NP_955770.1| ribonucleoside-diphosphate reductase subunit M2 B [Mus musculus]
 gi|81885688|sp|Q6PEE3|RIR2B_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B;
           AltName: Full=TP53-inducible ribonucleotide reductase M2
           B; AltName: Full=p53-inducible ribonucleotide reductase
           small subunit 2-like protein; Short=p53R2
 gi|34786000|gb|AAH58103.1| Ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus]
 gi|74218244|dbj|BAE23760.1| unnamed protein product [Mus musculus]
          Length = 351

 Score =  160 bits (405), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  + + R ++ +A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEDRVREIIADAVQIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A 
Sbjct: 279 CVLMKQYIEFVADRLLGELGFSKIFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336

Query: 122 L 122
           +
Sbjct: 337 M 337


>gi|332876813|ref|ZP_08444570.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
           sp. oral taxon 329 str. F0087]
 gi|332685239|gb|EGJ58079.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
           sp. oral taxon 329 str. F0087]
          Length = 324

 Score =  160 bits (405), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 8/120 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  ++  R ++ +A  +E  +  + +P   +G+N
Sbjct: 197 RDEGLHCDFACLLY------VNHLQNKLSEETIREIIVDAVAIEKEFVTDALPVKLIGMN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G   ++  T NPF +M E+I L+ + NFFE RV EYQ+   
Sbjct: 251 AELMCQYIEFVADRLLVALGCNKVWNAT-NPFDFM-ELISLQGKTNFFERRVGEYQKTGV 308


>gi|42544136|ref|NP_056528.2| ribonucleoside-diphosphate reductase subunit M2 B isoform 1 [Homo
           sapiens]
 gi|114621161|ref|XP_001153916.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
           isoform 2 [Pan troglodytes]
 gi|74727333|sp|Q7LG56|RIR2B_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B;
           AltName: Full=TP53-inducible ribonucleotide reductase M2
           B; AltName: Full=p53-inducible ribonucleotide reductase
           small subunit 2-like protein; Short=p53R2
 gi|261278726|pdb|3HF1|A Chain A, Crystal Structure Of Human P53r2
 gi|261278727|pdb|3HF1|B Chain B, Crystal Structure Of Human P53r2
 gi|7229086|dbj|BAA92434.1| ribonucleotide reductase [Homo sapiens]
 gi|7229115|dbj|BAA92493.1| ribonucleotide reductase [Homo sapiens]
 gi|45259569|dbj|BAD12267.1| p53-inducible ribonucleotide reductase small subunit 2 [Homo
           sapiens]
 gi|52545612|emb|CAB70703.2| hypothetical protein [Homo sapiens]
 gi|63055293|gb|AAY29059.1| ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
 gi|80473666|gb|AAI08262.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
 gi|109659128|gb|AAI17497.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
 gi|119612247|gb|EAW91841.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_b [Homo
           sapiens]
 gi|120660296|gb|AAI30629.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
 gi|190689549|gb|ACE86549.1| ribonucleotide reductase M2 B (TP53 inducible) protein [synthetic
           construct]
 gi|190690911|gb|ACE87230.1| ribonucleotide reductase M2 B (TP53 inducible) protein [synthetic
           construct]
 gi|261859014|dbj|BAI46029.1| ribonucleotide reductase M2 B [synthetic construct]
 gi|313882916|gb|ADR82944.1| ribonucleotide reductase M2 B (TP53 inducible) [synthetic
           construct]
          Length = 351

 Score =  160 bits (405), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 41/121 (33%), Positives = 70/121 (57%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A 
Sbjct: 279 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336

Query: 122 L 122
           +
Sbjct: 337 M 337


>gi|77748199|gb|AAI06683.1| MGC78958 protein [Xenopus laevis]
          Length = 406

 Score =  160 bits (405), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 40/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  K  +Q+ R ++ +A  +E  +  E +P   +G+N
Sbjct: 281 RDEGLHTDFACLLFK-------HVVHKPSEQRVREIIIDAVKIEQEFLIEALPVELIGMN 333

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G + +FK +ENPF +M E I L+ + NFFE +V EYQ+   
Sbjct: 334 CTLMKQYIEFVADRLLLELGFKKIFK-SENPFDFM-ENISLEGKTNFFEKKVGEYQKMGV 391

Query: 122 L 122
           +
Sbjct: 392 M 392


>gi|71648907|ref|XP_813233.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma cruzi
           strain CL Brener]
 gi|70878098|gb|EAN91382.1| ribonucleoside-diphosphate reductase small chain, putative
           [Trypanosoma cruzi]
          Length = 337

 Score =  160 bits (405), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         ++  K  +++ R ++  A  +E  +  + +P   +G+N
Sbjct: 210 RDEGLHTDFACLLY------ENYIVNKLPKERIREIICSAVDIEREFICDAIPVRLLGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A     Y++F+A+R    +G E  +  ++NPF +M E+I L+ + NFFE +V EYQ+   
Sbjct: 264 ADLMSTYIEFVADRLLVALGNERHYN-SKNPFDFM-EMISLQGKTNFFEKKVGEYQKAGV 321

Query: 122 LK 123
           + 
Sbjct: 322 MS 323


>gi|322693757|gb|EFY85606.1| ribonucleoside-diphosphate reductase M2 subunit [Metarhizium
           acridum CQMa 102]
          Length = 411

 Score =  160 bits (405), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +       + HL  +  +Q    ++ +A  +E  +  E +P   +G+N
Sbjct: 273 RDEGLHTDFACLL-------HSHLKNRASKQIIHDIITDAVAIEKEFLTEALPCALLGMN 325

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +   +QY++F+A+R    +G E ++K T NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 326 SNLMKQYIEFVADRLLVALGNEKVYK-TSNPFDFM-ENISLGGKTNFFEKRVGDYQKAGV 383

Query: 122 L 122
           L
Sbjct: 384 L 384


>gi|38229183|ref|NP_938276.1| 20L [Yaba monkey tumor virus]
 gi|38000454|gb|AAR07377.1| 20L [Yaba monkey tumor virus]
          Length = 325

 Score =  160 bits (405), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     +   R ++ EA  +E  +  E MP   +G+N
Sbjct: 200 RDEGLHCDFACMMFK-------HLSNPPLENVIRDIVIEAVDIEKNFLTEAMPVKLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G +  +  ++NPF +M E I L+ + NFFE RV+EYQ+ + 
Sbjct: 253 CDLMKQYIEFVADRLLLELGCKK-YYCSKNPFDFM-ENISLEGKTNFFEKRVSEYQKMSV 310

Query: 122 LK 123
           + 
Sbjct: 311 MS 312


>gi|329113329|ref|ZP_08242110.1| Ribonucleoside-diphosphate reductase subunit beta [Acetobacter
           pomorum DM001]
 gi|326697154|gb|EGE48814.1| Ribonucleoside-diphosphate reductase subunit beta [Acetobacter
           pomorum DM001]
          Length = 339

 Score =  160 bits (405), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH    I +      ENP LWT++ + +   +       E A+       G   G
Sbjct: 204 VRDETLHCLSIIRLFRVFIQENPELWTEQLRTELTDICRTIVEHEEAFIDLAFEMGAVEG 263

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           LNA   + Y+ FIA+RR  Q+GLEP++  T NP PW+ ++++  +  NFFE R TEY + 
Sbjct: 264 LNAEQVKTYIHFIADRRLTQLGLEPIYNTTTNPLPWLDDMLNAVEHTNFFENRSTEYSRA 323

Query: 120 A-ELKWD 125
           +    W+
Sbjct: 324 STAGTWE 330


>gi|90660281|gb|ABD97395.1| ribonucleotide reductase small subunit [Cowpox virus]
          Length = 333

 Score =  159 bits (404), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 209 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 262 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 319

Query: 122 LK 123
           + 
Sbjct: 320 MS 321


>gi|331245491|ref|XP_003335382.1| ribonucleoside-diphosphate reductase subunit M2 [Puccinia graminis
           f. sp. tritici CRL 75-36-700-3]
 gi|309314372|gb|EFP90963.1| ribonucleoside-diphosphate reductase subunit M2 [Puccinia graminis
           f. sp. tritici CRL 75-36-700-3]
          Length = 380

 Score =  159 bits (404), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +    PH  T       + ++ +A  +E  +  + +P   +G+N
Sbjct: 243 RDEGLHTDFACLLFTHL-ERRPHPDT------VQAIIAQAVEIEKEFLSDALPCKLIGMN 295

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G E  +  T NPF +M E+I L  + NFFE RV++Y +   
Sbjct: 296 ADLMCQYIEFVADRLLVALGNEKFYNAT-NPFDFM-EMISLSGKTNFFEKRVSDYAKAGV 353

Query: 122 LK 123
           + 
Sbjct: 354 MT 355


>gi|302665732|ref|XP_003024474.1| hypothetical protein TRV_01368 [Trichophyton verrucosum HKI 0517]
 gi|291188529|gb|EFE43863.1| hypothetical protein TRV_01368 [Trichophyton verrucosum HKI 0517]
          Length = 529

 Score =  159 bits (404), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +        ++ EA  +E  +  + +P   +G+N
Sbjct: 393 RDEGLHTDFACLLFS-------HLNYRPDPSAVEAIITEAVTIEQEFLTDALPCALLGMN 445

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G +  +  T NPF +M   I L  + NFFE RV +YQ+   
Sbjct: 446 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMD-NISLAGKTNFFEKRVGDYQKAGV 503

Query: 122 L 122
           +
Sbjct: 504 M 504


>gi|171687074|ref|XP_001908478.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943498|emb|CAP69151.1| unnamed protein product [Podospora anserina S mat+]
          Length = 409

 Score =  159 bits (404), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q    ++ +A  +E  +  E +P   +G+N
Sbjct: 271 RDEGLHTDFACLLFS-------HLNNRPSKQLVEDIIRDAVTIEQEFLTEALPCALLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +   +QY++F+A+R    +G + +++ + NPF +M E I L  + NFFE RV EYQ+   
Sbjct: 324 SNLMKQYIEFVADRLLVALGNDKIYR-STNPFDFM-ENISLGGKTNFFEKRVGEYQKAGV 381

Query: 122 LK 123
           + 
Sbjct: 382 MN 383


>gi|56404698|sp|O57175|RIR2_VACCA RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2772676|gb|AAB96415.1| ribonucleotide reductase, small subunit [Vaccinia virus]
 gi|47088360|gb|AAT10430.1| ribonucleotide reductase small subunit [Vaccinia virus]
 gi|160857924|emb|CAM58212.1| ribonucleotide reductase small subunit [Vaccinia virus Ankara]
          Length = 319

 Score =  159 bits (404), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305

Query: 122 LK 123
           + 
Sbjct: 306 MS 307


>gi|167519412|ref|XP_001744046.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778008|gb|EDQ91624.1| predicted protein [Monosiga brevicollis MX1]
          Length = 329

 Score =  159 bits (404), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 37/123 (30%), Positives = 68/123 (55%), Gaps = 9/123 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K        +  +++   ++ +A  +E  +    +P G +G+N
Sbjct: 204 RDEGLHTDFACLMFSMLKK-------RPSKERVTGIIMDAVEIEQDFLTNALPCGLLGMN 256

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A   +QY++F+++R    +G E +F  +ENPF +M E I ++ + NFFE RV EYQ+   
Sbjct: 257 ATLMKQYIEFVSDRLLVALGCEKIFN-SENPFDFM-ESISIEGKTNFFEKRVGEYQKAGV 314

Query: 122 LKW 124
           +  
Sbjct: 315 MAD 317


>gi|66275840|ref|YP_232925.1| ribonucleotide reductase small subunit [Vaccinia virus]
 gi|132629|sp|P11158|RIR2_VACCV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|335624|gb|AAA48244.1| F4L protein [Vaccinia virus]
 gi|335809|gb|AAA88680.1| ribonucleotide reductase (EC 1.17.4.1) small subunit [Vaccinia
           virus]
 gi|29692149|gb|AAO89322.1| ribonucleotide reductase small subunit [Vaccinia virus WR]
          Length = 319

 Score =  159 bits (404), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305

Query: 122 LK 123
           + 
Sbjct: 306 MS 307


>gi|302833193|ref|XP_002948160.1| hypothetical protein VOLCADRAFT_101784 [Volvox carteri f.
           nagariensis]
 gi|300266380|gb|EFJ50567.1| hypothetical protein VOLCADRAFT_101784 [Volvox carteri f.
           nagariensis]
          Length = 354

 Score =  159 bits (404), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 9/124 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  +  +++   ++ EA  LE  +  E +    +G+N
Sbjct: 219 RDEGLHCDFACCLY-------GHLKNRLSRERVVKIVDEAVRLEDEFCTEALSCELLGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G +  +    NPF WM E+I L+ + NFFE RV EYQ+   
Sbjct: 272 ADLMRQYIRFVADRLLVSLGYDKYYNTV-NPFDWM-EMISLQGKANFFERRVGEYQRACV 329

Query: 122 LKWD 125
           +  D
Sbjct: 330 MAGD 333


>gi|197101489|ref|NP_001125944.1| ribonucleoside-diphosphate reductase subunit M2 B [Pongo abelii]
 gi|75041724|sp|Q5R9G0|RIR2B_PONAB RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B
 gi|55729743|emb|CAH91600.1| hypothetical protein [Pongo abelii]
          Length = 351

 Score =  159 bits (404), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F   ENPF +M E I L+ + NFFE RV+EYQ+ A 
Sbjct: 279 CILMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336

Query: 122 L 122
           +
Sbjct: 337 M 337


>gi|298707394|emb|CBJ30029.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 380

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 9/120 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  ++  + P        ++   ++ +A  +E  +    +P   +G+N
Sbjct: 255 RDEGLHTDFACLLFRKLVNKLP-------VERVAEIICDAVDIEKEFITSALPVELIGMN 307

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F A+R   ++G E  +  + NPF WM E+I L+ + NFFE RV EY +   
Sbjct: 308 SALMRQYIEFCADRLLMELGCEKKYN-STNPFDWM-EMISLQGKTNFFEKRVGEYSKSGV 365


>gi|71043760|ref|NP_001020911.1| ribonucleoside-diphosphate reductase subunit M2 [Rattus norvegicus]
 gi|77416595|sp|Q4KLN6|RIR2_RAT RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|68533806|gb|AAH99082.1| Ribonucleotide reductase M2 [Rattus norvegicus]
 gi|149051013|gb|EDM03186.1| rCG61374 [Rattus norvegicus]
          Length = 390

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  +  +E  +  E +P   +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIITNSVRIEQEFLTEALPVKLIGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +FK  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIFK-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 375

Query: 122 LK 123
           + 
Sbjct: 376 MS 377


>gi|194673004|ref|XP_607398.4| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos
           taurus]
 gi|297482473|ref|XP_002692807.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like [Bos
           taurus]
 gi|296480530|gb|DAA22645.1| ribonucleotide reductase M2 polypeptide-like [Bos taurus]
          Length = 351

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++  A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F   ENPF +M E I L+ + NFFE RV+EYQ+ A 
Sbjct: 279 CVLMKQYIEFVADRLLTELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336

Query: 122 L 122
           +
Sbjct: 337 M 337


>gi|124010268|ref|ZP_01694921.1| ribonucleoside-diphosphate reductase, beta subunit [Microscilla
           marina ATCC 23134]
 gi|123983653|gb|EAY24093.1| ribonucleoside-diphosphate reductase, beta subunit [Microscilla
           marina ATCC 23134]
          Length = 330

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 8/120 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N           K   +   +++  A  +E  +  + +P   +G+N
Sbjct: 200 RDEGLHCDFACLLYNSYIK------NKLPNETVVSIIKNAVEIEKEFVTDALPVKLIGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    +Y++F+A+R   ++G E  +  T NPF +M E+I L+ + NFFE RV+EY +   
Sbjct: 254 SDLMSEYIEFVADRLLVELGCEKQYN-TANPFDFM-EMISLEGKTNFFEKRVSEYSKAGV 311


>gi|330994651|ref|ZP_08318574.1| putative ribonucleoside-diphosphate reductase small subunit
           [Gluconacetobacter sp. SXCC-1]
 gi|329758292|gb|EGG74813.1| putative ribonucleoside-diphosphate reductase small subunit
           [Gluconacetobacter sp. SXCC-1]
          Length = 365

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDESLH +    +      ENP +WT   +   R +  +    E A+   +   G   G
Sbjct: 234 VRDESLHCDSMARLFRVFVQENPEIWTDTLRDDIRQICRDIVEHEDAFIDLSFEMGAVEG 293

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L+A   ++Y++F+ANRR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TEY + 
Sbjct: 294 LDAGQVKRYIRFVANRRLGQLGLDGIYDIATNPLPWVDEMVNAVEHANFFENRATEYSRA 353

Query: 120 A-ELKWD 125
           +    WD
Sbjct: 354 STTGTWD 360


>gi|150863757|ref|XP_001382334.2| small subunit of ribonucleotide reductase [Scheffersomyces stipitis
           CBS 6054]
 gi|149385013|gb|ABN64305.2| small subunit of ribonucleotide reductase [Scheffersomyces stipitis
           CBS 6054]
          Length = 417

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   +    ++ EA  +E  +  + +P   +G+N
Sbjct: 286 RDEGLHTDFACLLFS-------HLQNRPDAEIVEKIITEAVKIEKEFFTDALPSSLLGMN 338

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G + ++  T NPF +M E I L  + NFFE RV++YQ+   
Sbjct: 339 AELMCQYVEFVADRLLVALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 396

Query: 122 L 122
           +
Sbjct: 397 M 397


>gi|311748425|ref|ZP_07722210.1| ribonucleoside-diphosphate reductase, beta subunit [Algoriphagus
           sp. PR1]
 gi|126576938|gb|EAZ81186.1| ribonucleoside-diphosphate reductase, beta subunit [Algoriphagus
           sp. PR1]
          Length = 326

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 66/122 (54%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  +      H+     ++  R ++ +A  +E  +  + +P   +G+N
Sbjct: 196 RDEGLHCDFACHLYTK------HVVNPLPKETVREIIIDAVKIEKEFVTDALPVRLIGMN 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R   ++  E ++  + NPF +M  +I L+ + NFFE RV +YQ+   
Sbjct: 250 SDLMCQYIEFVADRLLLELDCEKVWN-STNPFDFMD-MISLQGKTNFFEKRVGDYQKAGV 307

Query: 122 LK 123
           +K
Sbjct: 308 MK 309


>gi|39977011|ref|XP_369893.1| hypothetical protein MGG_06408 [Magnaporthe oryzae 70-15]
 gi|145016179|gb|EDK00669.1| hypothetical protein MGG_06408 [Magnaporthe oryzae 70-15]
          Length = 403

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +        L  +  ++  + ++ +A  +E  +  E +P   +G+N
Sbjct: 260 RDEGLHTDFACLLFSL-------LNNRPNKEVVKEIVVDAVKIEQEFLTEALPCALLGMN 312

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A   +QY++F+A+R    +G E +++ T NPF +M E I L  + NFFE RV EYQ+   
Sbjct: 313 ANLMKQYIEFVADRLLVALGNEKVYRAT-NPFDFM-ENISLGGKTNFFEKRVGEYQKAGV 370

Query: 122 L 122
           +
Sbjct: 371 M 371


>gi|158286793|ref|XP_308927.4| AGAP006818-PA [Anopheles gambiae str. PEST]
 gi|157020637|gb|EAA04227.4| AGAP006818-PA [Anopheles gambiae str. PEST]
          Length = 400

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++   ++ +A L+E  +  + +P   +G+N
Sbjct: 275 RDEGLHCDFACLMFK-------YLVQKPSKERVTEIIRDAVLIEQEFLTKALPVDMLGMN 327

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R   ++G E ++ +T+NPF +M E I L+ + NFFE +V EYQ+   
Sbjct: 328 CDLMSQYIEFVADRLLLELGCEKIY-HTKNPFSFM-EFISLEGKTNFFEKKVGEYQKWGV 385

Query: 122 L 122
           +
Sbjct: 386 M 386


>gi|145553335|ref|XP_001462342.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124430181|emb|CAK94969.1| unnamed protein product [Paramecium tetraurelia]
          Length = 355

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K   Q+   ++  A  +E  +  E +P   +G+N
Sbjct: 230 RDEGLHTDFACLLYK-------HLVNKMSNQRIHEIISSAVEIEKEFISEALPVELIGMN 282

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +   +QY++F+A+R    +G   ++  ++NPF WM  +I L+ + NFFE RV +YQ+   
Sbjct: 283 SNLMKQYIEFVADRLIFALGAPKIYN-SKNPFEWMD-MISLQGKTNFFERRVGDYQKAGV 340

Query: 122 LK 123
           + 
Sbjct: 341 MS 342


>gi|224048725|ref|XP_002196356.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Taeniopygia
           guttata]
          Length = 390

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ + ++  A L+E  +  E +P   +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLIHKPSEERVKEIIMNAVLIEQEFLTEALPVKLIGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 375

Query: 122 LK 123
           + 
Sbjct: 376 MS 377


>gi|224046583|ref|XP_002198998.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
          Length = 362

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 39/121 (32%), Positives = 68/121 (56%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       +L  +  +++   ++  A  +E  +  E +P G +G+N
Sbjct: 237 RDEGLHCDFACLMFH-------YLVNRPSEERVCEIIVNAVEIEQEFLTEALPVGLIGMN 289

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F   ENPF +M E I L+ + NFFE RV+EYQ+ A 
Sbjct: 290 CTLMKQYIEFVADRLLMELGFSKVFN-VENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 347

Query: 122 L 122
           +
Sbjct: 348 M 348


>gi|91081999|ref|XP_969259.1| PREDICTED: similar to AGAP006818-PA [Tribolium castaneum]
 gi|270007377|gb|EFA03825.1| hypothetical protein TcasGA2_TC013940 [Tribolium castaneum]
          Length = 374

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 68/120 (56%), Gaps = 9/120 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K  +++ ++++ +A  +E  +  E +P   +G+N
Sbjct: 250 RDEGLHCDFACLMFS-------HLVQKPSKERIQSIIQDAVKIEKEFLTEALPVSMIGMN 302

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R   ++G E ++  ++NPF +M+ +I  + + NFFE +V EYQ+   
Sbjct: 303 CALMCQYIEFVADRLLGELGCEKIYN-SQNPFDFMT-IISNEGKTNFFEKKVGEYQKSGV 360


>gi|261189551|ref|XP_002621186.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
           dermatitidis SLH14081]
 gi|239591422|gb|EEQ74003.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
           dermatitidis SLH14081]
 gi|239613047|gb|EEQ90034.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
           dermatitidis ER-3]
 gi|327356917|gb|EGE85774.1| ribonucleotide reductase M2 B [Ajellomyces dermatitidis ATCC 18188]
          Length = 413

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   +    ++ EA  +E  +  + +P   +G+N
Sbjct: 274 RDEGLHTDFACLLFS-------HLRHRPSPEAVERIITEAVTIEQEFLSDALPVALLGMN 326

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G + ++  + NPF +M   I L  + NFFE RV +YQ+   
Sbjct: 327 AKLMCQYIEFVADRLLVALGNKKVYN-STNPFDFMD-NISLAGKTNFFEKRVGDYQKAGV 384

Query: 122 L 122
           +
Sbjct: 385 M 385


>gi|261335316|emb|CBH18310.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei gambiense DAL972]
          Length = 337

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         ++  K  + +   ++  A  +E  +  + +P   +G+N
Sbjct: 210 RDEGLHTDFACLLY------EKYIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G +  +  ++NPF +M  +I L+ + NFFE +V EYQ+   
Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFMD-MISLQGKTNFFEKKVGEYQKAGV 321

Query: 122 LK 123
           + 
Sbjct: 322 MS 323


>gi|289177076|ref|NP_001165949.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 3 [Homo
           sapiens]
 gi|55631160|ref|XP_528204.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
           isoform 3 [Pan troglodytes]
 gi|42794058|dbj|BAD11774.1| p53-inducible ribonucleotide reductase small subunit 2 long form
           [Homo sapiens]
 gi|119612246|gb|EAW91840.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_a [Homo
           sapiens]
          Length = 299

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 174 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 226

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F   ENPF +M E I L+ + NFFE RV+EYQ+ A 
Sbjct: 227 CILMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 284

Query: 122 L 122
           +
Sbjct: 285 M 285


>gi|157869457|ref|XP_001683280.1| ribonucleoside-diphosphate reductase small chain [Leishmania major
           strain Friedlin]
 gi|68224164|emb|CAJ04657.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania major strain Friedlin]
          Length = 392

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N       H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 265 RDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFFE +V EYQ+   
Sbjct: 319 AELMAQYIEFVADRLLVSLGEEKHYHSTQ-PFEFM-EMISLQGKTNFFERKVGEYQKAGV 376

Query: 122 LK 123
           + 
Sbjct: 377 MS 378


>gi|323450429|gb|EGB06310.1| hypothetical protein AURANDRAFT_65685 [Aureococcus anophagefferens]
          Length = 349

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 9/120 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + ++++ + P        +    ++ +A  +E  +    +P   +G+N
Sbjct: 224 RDEGMHCDFACLLYSKLRNKLP-------VETINALIGDAVTIEKEFVVSALPVELIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           + +  QY++F A+R    +G   L++ T NPF WM E+I L+ + NFFE RV EY +   
Sbjct: 277 SRTMCQYIEFCADRLLLALGCPKLYEAT-NPFDWM-ELISLQGKTNFFEKRVGEYAKSGV 334


>gi|260950985|ref|XP_002619789.1| hypothetical protein CLUG_00948 [Clavispora lusitaniae ATCC 42720]
 gi|238847361|gb|EEQ36825.1| hypothetical protein CLUG_00948 [Clavispora lusitaniae ATCC 42720]
          Length = 419

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +        ++ EA  +E  Y  + +P   +G+N
Sbjct: 289 RDEGLHTDFACLLFS-------HLNNRPNPAIVEKIITEAVTIEKEYFTDALPASLLGMN 341

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G + ++  T NPF +M E I L  + NFFE RV++YQ+   
Sbjct: 342 CDLMCQYVEFVADRLLVALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 399

Query: 122 L 122
           +
Sbjct: 400 M 400


>gi|291388369|ref|XP_002710634.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
           [Oryctolagus cuniculus]
          Length = 339

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++  A  +E  +  E +P G +G+N
Sbjct: 214 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 266

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F   ENPF +M E I L+ + NFFE RV+EYQ+ A 
Sbjct: 267 CILMKQYIEFVADRLLMELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 324

Query: 122 L 122
           +
Sbjct: 325 M 325


>gi|156058956|ref|XP_001595401.1| hypothetical protein SS1G_03490 [Sclerotinia sclerotiorum 1980]
 gi|154701277|gb|EDO01016.1| hypothetical protein SS1G_03490 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 407

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 66/121 (54%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K        +  +Q  + ++ EA  +E  +  E +P   +G+N
Sbjct: 266 RDEGLHTDFACLLFSHLKH-------RPSKQAVQDVITEAVEIEQEFLTEALPCALLGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +   +QY++F+A+R    +G + ++K   NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 319 STLMKQYIEFVADRLLVTLGNDKVYKSA-NPFDFM-ENISLAGKTNFFEKRVGDYQKAGV 376

Query: 122 L 122
           +
Sbjct: 377 M 377


>gi|126322530|ref|XP_001380256.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 361

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 72/121 (59%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       +L  K  +++ + ++  A  +E  +  + +P G +G+N
Sbjct: 236 RDEGLHCDFACLMFH-------YLVNKPSEERVKEIIINAVEIEQEFLTDALPVGLIGIN 288

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +   +QY++F+A+R   ++G   +F+ ++NPF +M E I L+ + NFFE RV+EYQ+ A 
Sbjct: 289 STLMKQYIEFVADRLLVELGFSKVFQ-SDNPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 346

Query: 122 L 122
           +
Sbjct: 347 M 347


>gi|118089007|ref|XP_419948.2| PREDICTED: similar to small subunit ribonucleotide reductase
           isoform 2 [Gallus gallus]
          Length = 384

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +         K  +++ + ++  A L+E  +  E +P   +G+N
Sbjct: 259 RDEGLHCDFACLMFKHLIR-------KPSEERVKEIIMNAVLIEQEFLTEALPVKLIGMN 311

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 312 CTLMKQYIEFVADRLMLELGFRKIYK-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 369

Query: 122 LK 123
           + 
Sbjct: 370 MS 371


>gi|2465173|emb|CAA71741.1| ribonucleotide reductase (Class I) [Trypanosoma brucei brucei]
          Length = 337

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         ++  K  + +   ++  A  +E  +  + +P   +G+N
Sbjct: 210 RDEGLHTDFACLLY------EKYIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G +  +  ++NPF +M  +I L+ + NFFE +V EYQ+   
Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFMD-MISLQGKTNFFEKKVGEYQKAGV 321

Query: 122 LK 123
           + 
Sbjct: 322 MS 323


>gi|194036959|ref|XP_001925036.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Sus
           scrofa]
          Length = 351

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  + + R ++  A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEARVREIIVNAVEIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A 
Sbjct: 279 CVLMKQYIEFVADRLLTELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336

Query: 122 L 122
           +
Sbjct: 337 M 337


>gi|148676854|gb|EDL08801.1| ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus]
          Length = 297

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  + + R ++ +A  +E  +  E +P G +G+N
Sbjct: 172 RDEGLHCDFACLMFQ-------YLVNKPSEDRVREIIADAVQIEQEFLTEALPVGLIGMN 224

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F   ENPF +M E I L+ + NFFE RV+EYQ+ A 
Sbjct: 225 CVLMKQYIEFVADRLLGELGFSKIF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 282

Query: 122 L 122
           +
Sbjct: 283 M 283


>gi|12085003|ref|NP_073405.1| 20L protein [Yaba-like disease virus]
 gi|56404692|sp|Q9DHU2|RIR2_YLDV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|12056179|emb|CAC21258.1| 20L protein [Yaba-like disease virus]
          Length = 325

 Score =  159 bits (402), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL         R ++ EA  +E  +  E +P   +G+N
Sbjct: 200 RDEGLHCDFACIMFK-------HLLNPPLNSVVRDIIIEAVNIEKNFLTEAIPVKLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G +  +  ++NPF +M E I L+ + NFFE RV+EYQ+ + 
Sbjct: 253 CDLMKQYIEFVADRLLLELGCDK-YYCSKNPFDFM-ENISLEGKTNFFEKRVSEYQKMSV 310

Query: 122 LK 123
           + 
Sbjct: 311 MS 312


>gi|44971395|gb|AAS49745.1| RPXV032 [Rabbitpox virus]
          Length = 319

 Score =  159 bits (402), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305

Query: 122 LK 123
           + 
Sbjct: 306 MS 307


>gi|114621164|ref|XP_001153859.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
 gi|332214017|ref|XP_003256123.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           [Nomascus leucogenys]
 gi|332830969|ref|XP_003311933.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Pan
           troglodytes]
 gi|119612248|gb|EAW91842.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_c [Homo
           sapiens]
 gi|194385642|dbj|BAG65196.1| unnamed protein product [Homo sapiens]
          Length = 297

 Score =  159 bits (402), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 172 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 224

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F   ENPF +M E I L+ + NFFE RV+EYQ+ A 
Sbjct: 225 CILMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 282

Query: 122 L 122
           +
Sbjct: 283 M 283


>gi|22164633|ref|NP_671546.1| EVM028 [Ectromelia virus]
 gi|22123774|gb|AAM92332.1|AF523264_28 EVM028 [Ectromelia virus]
          Length = 319

 Score =  159 bits (402), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + Y++FIA+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 248 CEMMKTYIEFIADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305

Query: 122 LK 123
           + 
Sbjct: 306 MS 307


>gi|3914640|sp|O15910|RIR2_TRYBB RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase R2 subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2411479|gb|AAB70705.1| ribonucleotide reductase small subunit [Trypanosoma brucei]
 gi|261335314|emb|CBH18308.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei gambiense DAL972]
          Length = 337

 Score =  159 bits (402), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         ++  K  + +   ++  A  +E  +  + +P   +G+N
Sbjct: 210 RDEGLHTDFACLLY------EKYIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G +  +  ++NPF +M  +I L+ + NFFE +V EYQ+   
Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFMD-MISLQGKTNFFEKKVGEYQKAGV 321

Query: 122 LK 123
           + 
Sbjct: 322 MS 323


>gi|256421019|ref|YP_003121672.1| ribonucleoside-diphosphate reductase [Chitinophaga pinensis DSM
           2588]
 gi|256035927|gb|ACU59471.1| Ribonucleoside-diphosphate reductase [Chitinophaga pinensis DSM
           2588]
          Length = 323

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F   +   ++   P        ++  T++ +A  +E  +  + +P   +G+N
Sbjct: 198 RDEGLHCEFACLLYGMLENRLPE-------EQVHTIIRDAVAIEKEFITDALPVALIGMN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    +Y++F+A+R   ++G   +F  T NPF +M E+I L+ + NFFE RV +YQ+   
Sbjct: 251 SKLMSEYIEFVADRWLSELGYTKIFN-TANPFDFM-EMISLQGKTNFFEKRVGDYQKAGV 308

Query: 122 LK 123
           + 
Sbjct: 309 MS 310


>gi|255037048|ref|YP_003087669.1| Ribonucleoside-diphosphate reductase [Dyadobacter fermentans DSM
           18053]
 gi|254949804|gb|ACT94504.1| Ribonucleoside-diphosphate reductase [Dyadobacter fermentans DSM
           18053]
          Length = 331

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F   +  +      H+  +  Q++   ++ +A  +E  +  E +P   +G+N
Sbjct: 201 RDEGLHCEFACLLYTK------HILNQLPQERVIEIMLDAVEIEKEFVSEALPVSLIGMN 254

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A   +QY+++IA+    ++G    F    NPF +M E+I L  + NFFE RV EYQ+   
Sbjct: 255 ADLMKQYIEYIADFWLERLGCPKQFGSA-NPFDFM-ELISLPGKTNFFEKRVGEYQKAGV 312

Query: 122 LK 123
           + 
Sbjct: 313 MS 314


>gi|50949848|emb|CAH10473.1| hypothetical protein [Homo sapiens]
          Length = 297

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 172 RDEGLHCDFACLMFQ-------YLVNKPPEERVREIIVDAVKIEQEFLTEALPVGLIGMN 224

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F   ENPF +M E I L+ + NFFE RV+EYQ+ A 
Sbjct: 225 CILMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 282

Query: 122 L 122
           +
Sbjct: 283 M 283


>gi|74025550|ref|XP_829341.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|70834727|gb|EAN80229.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|261335315|emb|CBH18309.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei gambiense DAL972]
          Length = 337

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         ++  K  + +   ++  A  +E  +  + +P   +G+N
Sbjct: 210 RDEGLHTDFACLLY------EKYIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G +  +  ++NPF +M  +I L+ + NFFE +V EYQ+   
Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFMD-MISLQGKTNFFEKKVGEYQKAGV 321

Query: 122 LK 123
           + 
Sbjct: 322 MS 323


>gi|190896512|gb|ACE96769.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896530|gb|ACE96778.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFFEKRVGEY 223


>gi|301117384|ref|XP_002906420.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
           infestans T30-4]
 gi|262107769|gb|EEY65821.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
           infestans T30-4]
          Length = 379

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 67/120 (55%), Gaps = 9/120 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + ++       L TK  + +   ++ +A  +E  +  +++P   +G+N
Sbjct: 254 RDEGMHTDFACLLYSK-------LVTKLPESRVHEIVRDAVTIEHEFVRDSLPVELIGMN 306

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R  + +G+  ++ + +NPF WM  +I L+ + NFFE RV EY +   
Sbjct: 307 SGLMCQYIEFVADRLLYSLGVSKIY-HAKNPFDWMD-MISLQGKTNFFEKRVGEYSKAGV 364


>gi|294945135|ref|XP_002784568.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239897674|gb|EER16364.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 238

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 8/121 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N +       +T+   ++   ++  A  +E  +  E++P   +G+N
Sbjct: 96  RDEGLHADFACLLYNMMH------YTRLPDERVHEIVRGAVDVERVFISESLPVSLIGMN 149

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    +Y++F+A+R    +G   L+  T NPF WM  +I L+ + NFFE RV EYQ+G  
Sbjct: 150 SQLMCRYIEFVADRLLVALGHPKLYNAT-NPFDWMK-MISLQGKTNFFEKRVGEYQKGGV 207

Query: 122 L 122
           +
Sbjct: 208 M 208


>gi|255079598|ref|XP_002503379.1| predicted protein [Micromonas sp. RCC299]
 gi|226518645|gb|ACO64637.1| predicted protein [Micromonas sp. RCC299]
          Length = 335

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + I         K  +   R ++ EA  +E  +  + +P   VG+N
Sbjct: 208 RDEGLHRDFACLLYSYINK-------KPNESVVRQIVKEAVEIEKEFVCDALPCALVGMN 260

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    +Y++F+A+    Q+G+   +    NPF WM E+I L+ + NFFE RV EYQ+   
Sbjct: 261 ADLMSEYIEFVADHLLGQLGMSKEYNAA-NPFDWM-ELISLQGKTNFFEKRVGEYQKSGV 318

Query: 122 LK 123
           + 
Sbjct: 319 MN 320


>gi|315041979|ref|XP_003170366.1| ribonucleoside-diphosphate reductase small subunit [Arthroderma
           gypseum CBS 118893]
 gi|311345400|gb|EFR04603.1| ribonucleoside-diphosphate reductase small subunit [Arthroderma
           gypseum CBS 118893]
          Length = 408

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +        ++ EA  +E  +  + +P   +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLNHRPEPSAVEAIITEAVTIEQEFLTDALPCALLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G +  +  T NPF +M   I L  + NFFE RV +YQ+   
Sbjct: 325 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMD-NISLAGKTNFFEKRVGDYQKAGV 382

Query: 122 L 122
           +
Sbjct: 383 M 383


>gi|74025554|ref|XP_829343.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|70834729|gb|EAN80231.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
          Length = 337

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         ++  K  + +   ++  A  +E  +  + +P   +G+N
Sbjct: 210 RDEGLHTDFACLLY------EKYIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G +  +  ++NPF +M  +I L+ + NFFE +V EYQ+   
Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFMD-MISLQGKTNFFEKKVGEYQKAGV 321

Query: 122 LK 123
           + 
Sbjct: 322 MS 323


>gi|294950175|ref|XP_002786498.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239900790|gb|EER18294.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 350

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 39/121 (32%), Positives = 67/121 (55%), Gaps = 8/121 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N +K      +T+   ++   ++  A  +E  +  E++P   +G+N
Sbjct: 208 RDEGLHADFACLLYNMLK------YTRLPDERVHEIVRGAVEVERVFISESLPVSLIGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    +Y++F+A+R    +G   L+  T NPF WM  +I L+ + NFFE RV EYQ+G  
Sbjct: 262 SQLMCRYIEFVADRLLVALGHPKLYNAT-NPFDWMK-MISLQGKTNFFEKRVGEYQKGGV 319

Query: 122 L 122
           +
Sbjct: 320 M 320


>gi|11878241|gb|AAG40862.1| ribonucleotide reductase [Emericella nidulans]
          Length = 406

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  ++    ++ EA  +E  +  + +P   +G+N
Sbjct: 269 RDEGLHTDFACLLFS-------HLNWRPSKKVVEDIIVEAVAIEKEFLTDALPCALLGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G +  F  T NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 322 AKLMCQYIEFVADRLLVALGNKEYFNAT-NPFDFM-ESISLAGKTNFFEKRVGDYQKAGV 379

Query: 122 L 122
           +
Sbjct: 380 M 380


>gi|50545856|ref|XP_500466.1| YALI0B03630p [Yarrowia lipolytica]
 gi|49646332|emb|CAG82692.1| YALI0B03630p [Yarrowia lipolytica]
          Length = 403

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  ++    ++ EA  +E  +  + +P G +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLENRPSKKIVEDVIVEAVGIEQEFLTDALPCGLLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G   ++  + NPF +M E I L  + NFFE RV++YQ+   
Sbjct: 325 AKLMCQYIEFVADRLLVALGNSKVYN-STNPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 382

Query: 122 L 122
           +
Sbjct: 383 M 383


>gi|111184227|gb|ABH08147.1| HSPV044 [Horsepox virus]
          Length = 319

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305

Query: 122 LK 123
           + 
Sbjct: 306 MS 307


>gi|324519017|gb|ADY47264.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum]
          Length = 376

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 9/124 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K        K  +++   ++ EA  +E  Y  E +P G +G+N
Sbjct: 251 RDEGLHRDFACLMFSHLKK-------KPNKERIYEIIREAVKIEQEYLTEALPVGLIGMN 303

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++++A+    ++    L+   ENPF +M+  I ++ + NFFE RV+EYQ+   
Sbjct: 304 CELMSQYIEYVADHLLTELKCPKLYNM-ENPFDFMAR-ISIEAKTNFFEKRVSEYQKAGV 361

Query: 122 LKWD 125
           L  D
Sbjct: 362 LSTD 365


>gi|27769295|gb|AAH42468.1| Similar to ribonucleotide reductase M2 polypeptide [Homo sapiens]
          Length = 285

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 160 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 212

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F   ENPF +M E I L+ + NFFE RV+EYQ+ A 
Sbjct: 213 CILMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 270

Query: 122 L 122
           +
Sbjct: 271 M 271


>gi|149721713|ref|XP_001493623.1| PREDICTED: ribonucleotide reductase M2 B (TP53 inducible) [Equus
           caballus]
          Length = 351

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 40/121 (33%), Positives = 67/121 (55%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVDLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F   ENPF +M E I L+ + NFFE RV+EYQ+ A 
Sbjct: 279 CVLMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336

Query: 122 L 122
           +
Sbjct: 337 M 337


>gi|18079279|ref|NP_525111.1| ribonucleoside diphosphate reductase small subunit [Drosophila
           melanogaster]
 gi|12644287|sp|P48592|RIR2_DROME RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|10727628|gb|AAF58599.2| ribonucleoside diphosphate reductase small subunit [Drosophila
           melanogaster]
 gi|15292183|gb|AAK93360.1| LD41588p [Drosophila melanogaster]
 gi|220946286|gb|ACL85686.1| CG8975-PA [synthetic construct]
 gi|220955972|gb|ACL90529.1| RnrS-PA [synthetic construct]
          Length = 393

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +         HL  +  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFFE +V EYQ+   
Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVGEYQRMGV 378

Query: 122 LK 123
           + 
Sbjct: 379 VS 380


>gi|113195221|ref|YP_717351.1| ribonucleotide reductase small subunit [Taterapox virus]
 gi|90660497|gb|ABD97610.1| ribonucleotide reductase small subunit [Taterapox virus]
          Length = 319

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305

Query: 122 LK 123
           + 
Sbjct: 306 MS 307


>gi|1808636|emb|CAA64118.1| G4L protein [Cowpox virus]
          Length = 319

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  ++++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVKSIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305

Query: 122 LK 123
           + 
Sbjct: 306 MS 307


>gi|132628|sp|P20493|RIR2_VACCC RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|335366|gb|AAA48018.1| putative F4L [Vaccinia virus Copenhagen]
          Length = 319

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305

Query: 122 LK 123
           + 
Sbjct: 306 MS 307


>gi|156386903|ref|XP_001634150.1| predicted protein [Nematostella vectensis]
 gi|156221230|gb|EDO42087.1| predicted protein [Nematostella vectensis]
          Length = 384

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  ++  R ++ +A ++E  +    +P   +G+N
Sbjct: 259 RDEGLHCDFACLMYK-------YLVNKPDEETVRGIIKDAVVIEQEFLTSALPVKLIGMN 311

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +  + ++   ENPF +M E I L+ + NF+E RV EYQ+   
Sbjct: 312 CALMRQYIEFVADRLLVALNCQKVYN-VENPFDFM-ENISLEGKTNFYEKRVGEYQKSGV 369

Query: 122 LK 123
           + 
Sbjct: 370 MS 371


>gi|20809684|gb|AAH28932.1| Similar to ribonucleotide reductase protein r2 class I [Homo
           sapiens]
          Length = 172

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 47  RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 99

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 100 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 157

Query: 122 LK 123
           + 
Sbjct: 158 MS 159


>gi|169779219|ref|XP_001824074.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
           oryzae RIB40]
 gi|238499845|ref|XP_002381157.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           flavus NRRL3357]
 gi|83772813|dbj|BAE62941.1| unnamed protein product [Aspergillus oryzae]
 gi|220692910|gb|EED49256.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           flavus NRRL3357]
          Length = 405

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   Q    ++ EA  +E  +  + +P   +G+N
Sbjct: 269 RDEGLHTDFACLLFS-------HLNNRPDPQIVEDVIVEAVSIEKEFLTDALPCALLGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G    F  T NPF +M   I L  + NFFE RV +YQ+   
Sbjct: 322 SNLMCQYIEFVADRLLVALGNNKYFNAT-NPFDFMD-NISLAGKTNFFEKRVGDYQKAGV 379

Query: 122 L 122
           +
Sbjct: 380 M 380


>gi|313213932|emb|CBY40745.1| unnamed protein product [Oikopleura dioica]
          Length = 418

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 65/121 (53%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  K  Q++   ++ +A  +E  +  + +P   +G+N
Sbjct: 287 RDEGLHTDFACLMYK-------HMVQKPSQEQIIAIIRDAVSIEQEFLTDALPVRLIGMN 339

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + Y++F+A+R   ++    ++K  ENPF +M E+I L+ + NFFE +V+EY +   
Sbjct: 340 CDLMKTYIEFVADRLLVELDCPKIYK-VENPFDFM-EMISLEGKTNFFEKKVSEYARAGV 397

Query: 122 L 122
           +
Sbjct: 398 M 398


>gi|438946|gb|AAA60776.1| homolog of vaccinia virus CDS F4L (ribonucleotide reductase, small
           chain); putative [Variola major virus]
 gi|94484491|gb|ABF23604.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94484688|gb|ABF23800.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94484886|gb|ABF23997.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724274|gb|ABG43399.1| ribonucleotide reductase small subunit [Variola virus]
          Length = 333

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 209 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 262 CEMMKTYIKFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 319

Query: 122 LK 123
           + 
Sbjct: 320 MS 321


>gi|885759|gb|AAA69374.1| E4L [Variola virus]
 gi|5830589|emb|CAB54628.1| E4L protein [Variola minor virus]
 gi|94483674|gb|ABF22791.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94484287|gb|ABF23401.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485692|gb|ABF24799.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486095|gb|ABF25200.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486298|gb|ABF25402.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486501|gb|ABF25604.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486703|gb|ABF25805.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486906|gb|ABF26007.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487312|gb|ABF26411.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487921|gb|ABF27017.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489931|gb|ABF29017.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724476|gb|ABG43600.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635085|gb|ABU91534.1| ribonucleotide reductase small subunit [Variola virus]
          Length = 319

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305

Query: 122 LK 123
           + 
Sbjct: 306 MS 307


>gi|170089003|ref|XP_001875724.1| ribonucleotide reductase, beta subunit [Laccaria bicolor S238N-H82]
 gi|164648984|gb|EDR13226.1| ribonucleotide reductase, beta subunit [Laccaria bicolor S238N-H82]
          Length = 422

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + + +K   PH       +  + ++ EA  +E  +  + +P   +G+N
Sbjct: 281 RDEGMHTDFACLLFSHLK-RRPH------PEVVKHIIVEAVKIEQEFLTDALPVKLIGMN 333

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  +  T NPF +M  +I L+ + NFFE RV++Y +  
Sbjct: 334 ADLMCQYIEFVADRLLVSLGNEKHYNKT-NPFDFMD-MISLQGKTNFFEKRVSDYSKAG 390


>gi|322817571|gb|EFZ25271.1| ribonucleoside-diphosphate reductase small chain, putative
           [Trypanosoma cruzi]
          Length = 337

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         ++  K   ++ R ++  A  +E  +  +++P   +G+N
Sbjct: 210 RDEGLHTDFACLLY------ENYIVNKLPTERIREIICSAVDIEREFICDSIPVRLLGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A     Y++F+A+R    +G E  +  ++NPF +M E+I L+ + NFFE +V EYQ+   
Sbjct: 264 ADLMSTYIEFVADRLLVALGNERHYN-SKNPFDFM-EMISLQGKTNFFEKKVGEYQKAGV 321

Query: 122 LK 123
           + 
Sbjct: 322 MS 323


>gi|190896544|gb|ACE96785.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFFEKRVGEY 223


>gi|219110949|ref|XP_002177226.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411761|gb|EEC51689.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 409

 Score =  158 bits (400), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 12/127 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + ++++        K  +     ++ EA  +E  +  + +P G +G+N
Sbjct: 278 RDEGLHCSFACQLYSKLER-------KLSETDMHKLIGEAVEVEKGFVCDALPVGLIGMN 330

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA- 120
           A    QY++F+A+R  H +G   L+  ++NPF WM  +I L+ + NFFE RV EYQ+   
Sbjct: 331 ASLMSQYVEFVADRLLHDLGYRTLY-GSKNPFDWMD-MISLEGKTNFFEKRVGEYQKSGV 388

Query: 121 --ELKWD 125
              L  D
Sbjct: 389 MASLSDD 395


>gi|190896528|gb|ACE96777.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  158 bits (400), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFFEKRVGEY 223


>gi|170032272|ref|XP_001844006.1| ribonucleoside-diphosphate reductase small chain [Culex
           quinquefasciatus]
 gi|167872122|gb|EDS35505.1| ribonucleoside-diphosphate reductase small chain [Culex
           quinquefasciatus]
          Length = 391

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 67/121 (55%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++   ++ EA ++E  +  + +P   +G+N
Sbjct: 266 RDEGLHTDFACLMFR-------YLVQKPSKERVLEIIREAVVIEQEFLTKALPVDLLGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R   ++G E ++  T+NPF +M E I L+ + NFFE +V EYQ+   
Sbjct: 319 CELMSQYIEFVADRLLLELGNEKIYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQKWGV 376

Query: 122 L 122
           +
Sbjct: 377 M 377


>gi|296227440|ref|XP_002759377.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           isoform 1 [Callithrix jacchus]
          Length = 351

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G    F   ENPF +M E I L+ + NFFE RV+EYQ+ A 
Sbjct: 279 CILMKQYIEFVADRLLVELGFSKFF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336

Query: 122 L 122
           +
Sbjct: 337 M 337


>gi|146418573|ref|XP_001485252.1| hypothetical protein PGUG_02981 [Meyerozyma guilliermondii ATCC
           6260]
 gi|146390725|gb|EDK38883.1| hypothetical protein PGUG_02981 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 418

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   +    ++ EA  +E  +  + +P   +G+N
Sbjct: 286 RDEGLHTDFACLLFS-------HLQNRPDPEIVEKIITEAVDIEKEFFTDALPISLLGMN 338

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G + ++    NPF +M E I L  + NFFE RV++YQ+   
Sbjct: 339 CKLMCQYVEFVADRLLVALGNKKIYNVA-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 396

Query: 122 L 122
           +
Sbjct: 397 M 397


>gi|885717|gb|AAA69333.1| C8L [Variola virus]
 gi|885826|gb|AAA69439.1| C8L [Variola virus]
 gi|94483878|gb|ABF22994.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94484081|gb|ABF23196.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485084|gb|ABF24194.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485286|gb|ABF24395.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485489|gb|ABF24597.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485894|gb|ABF25000.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487109|gb|ABF26209.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487515|gb|ABF26613.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487716|gb|ABF26813.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488123|gb|ABF27218.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488323|gb|ABF27417.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488523|gb|ABF27616.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488724|gb|ABF27816.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488925|gb|ABF28016.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489125|gb|ABF28215.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489324|gb|ABF28413.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489527|gb|ABF28615.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489726|gb|ABF28813.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94490135|gb|ABF29220.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724070|gb|ABG43196.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724681|gb|ABG43804.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724885|gb|ABG44007.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725088|gb|ABG44209.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725293|gb|ABG44413.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725496|gb|ABG44615.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725700|gb|ABG44818.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725903|gb|ABG45020.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109726107|gb|ABG45223.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109726310|gb|ABG45425.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109726513|gb|ABG45627.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635013|gb|ABU91466.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635031|gb|ABU91483.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635049|gb|ABU91500.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635067|gb|ABU91517.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635103|gb|ABU91551.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635121|gb|ABU91568.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635139|gb|ABU91585.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635158|gb|ABU91603.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635176|gb|ABU91620.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635194|gb|ABU91637.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635212|gb|ABU91654.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635230|gb|ABU91671.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635248|gb|ABU91688.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635266|gb|ABU91705.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635284|gb|ABU91722.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635320|gb|ABU91756.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635338|gb|ABU91773.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635356|gb|ABU91790.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635374|gb|ABU91807.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635392|gb|ABU91824.1| ribonucleotide reductase small subunit [Variola virus]
 gi|157739431|gb|ABU91739.1| ribonucleotide reductase small subunit [Variola virus]
          Length = 319

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 248 CEMMKTYIKFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305

Query: 122 LK 123
           + 
Sbjct: 306 MS 307


>gi|157939640|ref|YP_001497012.1| ribonucleotide reductase [Tanapox virus]
 gi|146746356|gb|ABQ43492.1| ribonucleotide reductase [Tanapox virus]
 gi|146746512|gb|ABQ43647.1| ribonucleotide reductase [Tanapox virus]
          Length = 325

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL         R ++ EA  +E  +  E +P   +G+N
Sbjct: 200 RDEGLHCDFACIMFK-------HLLNPPLNSVVRDIIIEAVNIEKNFLTEAIPVKLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G    +  ++NPF +M E I L+ + NFFE RV+EYQ+ + 
Sbjct: 253 CDLMKQYIEFVADRLLLELGCNK-YYCSKNPFDFM-ENISLEGKTNFFEKRVSEYQKMSV 310

Query: 122 LK 123
           + 
Sbjct: 311 MS 312


>gi|190896536|gb|ACE96781.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896560|gb|ACE96793.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896566|gb|ACE96796.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFFEKRVGEY 223


>gi|73974198|ref|XP_539109.2| PREDICTED: similar to ribonucleotide reductase M2 B (TP53
           inducible) isoform 2 [Canis familiaris]
          Length = 351

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++  A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F   ENPF +M E I L+ + NFFE RV EYQ+ A 
Sbjct: 279 CVLMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVAEYQRFAV 336

Query: 122 L 122
           +
Sbjct: 337 M 337


>gi|190896524|gb|ACE96775.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896534|gb|ACE96780.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFFEKRVGEY 223


>gi|195485577|ref|XP_002091148.1| GE13485 [Drosophila yakuba]
 gi|194177249|gb|EDW90860.1| GE13485 [Drosophila yakuba]
          Length = 393

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +         HL  +  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFFE +V EYQ+   
Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVGEYQRMGV 378

Query: 122 LK 123
           + 
Sbjct: 379 VS 380


>gi|281340156|gb|EFB15740.1| hypothetical protein PANDA_011632 [Ailuropoda melanoleuca]
          Length = 336

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++  A  +E  +  E +P G +G+N
Sbjct: 211 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F   ENPF +M E I L+ + NFFE RV EYQ+ A 
Sbjct: 264 CVLMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVAEYQRFAV 321

Query: 122 L 122
           +
Sbjct: 322 M 322


>gi|74025552|ref|XP_829342.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|70834728|gb|EAN80230.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
          Length = 337

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 64/122 (52%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         ++  K  + +   ++  A L+E  +  + +P   +G+N
Sbjct: 210 RDEGLHTDFACLLY------EKYIVNKLPRDRVLEIICNAVLIEREFICDALPVRLIGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G +  +  ++NPF +M  +I L+ + NFFE +V EYQ+   
Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFMD-MISLQGKTNFFEKKVGEYQKAGV 321

Query: 122 LK 123
           + 
Sbjct: 322 MS 323


>gi|145580571|pdb|2UW2|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase
           Subunit R2
          Length = 332

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 207 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 259

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 260 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 317

Query: 122 LK 123
           + 
Sbjct: 318 MS 319


>gi|157126966|ref|XP_001654749.1| ribonucleoside-diphosphate reductase small chain [Aedes aegypti]
 gi|15638625|gb|AAL05057.1|AF411297_1 ribonucleotide reductase 2 [Aedes aegypti]
 gi|82469974|gb|ABB77235.1| ribonucleotide reductase small subunit R2 [Aedes aegypti]
 gi|108873070|gb|EAT37295.1| ribonucleoside-diphosphate reductase small chain [Aedes aegypti]
          Length = 397

 Score =  157 bits (399), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  Q++   ++ EA L+E  +  + +P   +G+N
Sbjct: 272 RDEGLHTDFACLMFK-------YLVQKPSQERVIEIIREAVLIEQEFLTKALPVDLLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R   ++G++ ++  T+NPF +M E I L+ + NFFE +V EYQ+   
Sbjct: 325 CDLMSQYIEFVADRLLLELGIDKIYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQKWGV 382

Query: 122 L 122
           +
Sbjct: 383 M 383


>gi|71416121|ref|XP_810103.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma cruzi
           strain CL Brener]
 gi|70874586|gb|EAN88252.1| ribonucleoside-diphosphate reductase small chain, putative
           [Trypanosoma cruzi]
          Length = 337

 Score =  157 bits (399), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         ++  K   ++ R ++  A  +E  +  +++P   +G+N
Sbjct: 210 RDEGLHTDFACLLY------ENYIVNKLPTERIREIICSAVDIEREFICDSIPVRLLGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A     Y++F+A+R    +G E  +  ++NPF +M E+I L+ + NFFE +V EYQ+   
Sbjct: 264 ADLMSTYIEFVADRLLVALGNERHYN-SKNPFDFM-EMISLQGKTNFFEKKVGEYQKAGV 321

Query: 122 LK 123
           + 
Sbjct: 322 MS 323


>gi|296227442|ref|XP_002759378.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           isoform 2 [Callithrix jacchus]
          Length = 299

 Score =  157 bits (399), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 174 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 226

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G    F   ENPF +M E I L+ + NFFE RV+EYQ+ A 
Sbjct: 227 CILMKQYIEFVADRLLVELGFSKFF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 284

Query: 122 L 122
           +
Sbjct: 285 M 285


>gi|258542157|ref|YP_003187590.1| ribonucleotide-diphosphate reductase subunit beta [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256633235|dbj|BAH99210.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256636294|dbj|BAI02263.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256639347|dbj|BAI05309.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256642403|dbj|BAI08358.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256645458|dbj|BAI11406.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256648511|dbj|BAI14452.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256651564|dbj|BAI17498.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256654555|dbj|BAI20482.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 339

 Score =  157 bits (399), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH    I +      ENP LWT++ + +   +       E A+       G   G
Sbjct: 204 VRDETLHCLSIIRLFRVFIQENPELWTEQLRTELTDICRTIVEHEEAFIDLAFEMGAVEG 263

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           LNA   + Y+ FIA+RR  Q+GLEP++  T NP PW+ ++++  +  NFFE R TEY + 
Sbjct: 264 LNAEQVKTYIHFIADRRLTQLGLEPIYNTTTNPLPWLDDMLNAVEHTNFFENRATEYSRA 323

Query: 120 A-ELKWD 125
           +    W+
Sbjct: 324 STSGTWE 330


>gi|149248382|ref|XP_001528578.1| ribonucleoside-diphosphate reductase small chain [Lodderomyces
           elongisporus NRRL YB-4239]
 gi|146448532|gb|EDK42920.1| ribonucleoside-diphosphate reductase small chain [Lodderomyces
           elongisporus NRRL YB-4239]
          Length = 422

 Score =  157 bits (399), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 64/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   +    ++ EA  +E  +  + +P   +G+N
Sbjct: 294 RDEGLHTDFACLLFS-------HLENRPDPKIVEKIISEAVEIEKEFFTDALPVSLLGMN 346

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G E ++K T NPF +M E I L  + NFFE RV++YQ+   
Sbjct: 347 CKLMCQYVEFVADRLLVALGNEKIYKVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 404

Query: 122 L 122
           +
Sbjct: 405 M 405


>gi|313235850|emb|CBY19835.1| unnamed protein product [Oikopleura dioica]
          Length = 382

 Score =  157 bits (399), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 65/121 (53%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  K  Q++   ++ +A  +E  +  + +P   +G+N
Sbjct: 251 RDEGLHTDFACLMYK-------HMVQKPSQEQIIAIIRDAVSIEQEFLTDALPVRLIGMN 303

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + Y++F+A+R   ++    ++K  ENPF +M E+I L+ + NFFE +V+EY +   
Sbjct: 304 CDLMKTYIEFVADRLLVELDCPKIYK-VENPFDFM-EMISLEGKTNFFEKKVSEYARAGV 361

Query: 122 L 122
           +
Sbjct: 362 M 362


>gi|326472581|gb|EGD96590.1| ribonucleotide reductase small subunit RnrA [Trichophyton tonsurans
           CBS 112818]
          Length = 408

 Score =  157 bits (399), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +        ++ EA  +E  +  + +P   +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLNYRPDPNAVEAIITEAVTIEQEFLTDALPCALLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G +  +  T NPF +M   I L  + NFFE RV +YQ+   
Sbjct: 325 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMD-NISLAGKTNFFEKRVGDYQKAGV 382

Query: 122 L 122
           +
Sbjct: 383 M 383


>gi|254572986|ref|XP_002493602.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
           complex [Pichia pastoris GS115]
 gi|238033401|emb|CAY71423.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
           complex [Pichia pastoris GS115]
 gi|328354568|emb|CCA40965.1| ribonucleoside-diphosphate reductase subunit M2 [Pichia pastoris
           CBS 7435]
          Length = 400

 Score =  157 bits (399), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  ++    ++ EA  +E  Y  + +P   +G+N
Sbjct: 271 RDEGLHTDFACLLFS-------HLNNRASEEIVEKIITEAVEIEKRYFTDALPVSLLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G + ++    NPF +M E I L  + NFFE RV++YQ+   
Sbjct: 324 CSLMCQYVEFVADRLLVALGNKKVYN-VNNPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381

Query: 122 L 122
           +
Sbjct: 382 M 382


>gi|154296564|ref|XP_001548712.1| ribonucleotide reductase small subunit [Botryotinia fuckeliana
           B05.10]
 gi|150843273|gb|EDN18466.1| ribonucleotide reductase small subunit [Botryotinia fuckeliana
           B05.10]
          Length = 407

 Score =  157 bits (399), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K        +  +Q  + ++ EA  +E  +  E +P   +G+N
Sbjct: 266 RDEGLHTDFACLLFSHLKH-------RPSKQAVQDVITEAVEIEQEFLTEALPCALLGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +   +QY++F+A+R    +G +  +K   NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 319 SNLMKQYIEFVADRLLLSLGNDKYYKSA-NPFDFM-ENISLAGKTNFFEKRVGDYQKAGV 376

Query: 122 L 122
           +
Sbjct: 377 M 377


>gi|38232564|gb|AAR15079.1| ribonucleotide reductase R2 subunit variant [Aedes albopictus]
          Length = 219

 Score =  157 bits (399), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  Q++   ++ EA L+E  +  + +P   +G+N
Sbjct: 94  RDEGLHTDFACLMFK-------YLVQKPSQERVIEIIREAVLIEQEFLTKALPVDLLGMN 146

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R   ++G++ ++  T+NPF +M E I L+ + NFFE +V EYQ+   
Sbjct: 147 CELMSQYIEFVADRLLLELGIDKIYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQKWGV 204

Query: 122 L 122
           +
Sbjct: 205 M 205


>gi|195333568|ref|XP_002033462.1| GM20395 [Drosophila sechellia]
 gi|195582581|ref|XP_002081105.1| GD25870 [Drosophila simulans]
 gi|194125432|gb|EDW47475.1| GM20395 [Drosophila sechellia]
 gi|194193114|gb|EDX06690.1| GD25870 [Drosophila simulans]
          Length = 393

 Score =  157 bits (399), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +         HL  +  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFFE +V EYQ+   
Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVAEYQRMGV 378

Query: 122 LK 123
           + 
Sbjct: 379 VS 380


>gi|302904131|ref|XP_003049009.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256729943|gb|EEU43296.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 389

 Score =  157 bits (399), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K        +  +Q  + ++ +A  +E  +  E +P   +G+N
Sbjct: 252 RDEGLHTDFACLLHSHLKG-------RASKQVIQDIITDAVTIEQEFLTEALPCALLGMN 304

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A   +QY++F+A+R    +G E ++K   NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 305 ADLMKQYIEFVADRLLVALGNEKVYKSA-NPFDFM-ENISLGGKTNFFEKRVGDYQKAGV 362

Query: 122 L 122
           L
Sbjct: 363 L 363


>gi|227541|prf||1706181A ribonucleotide reductase
          Length = 290

 Score =  157 bits (398), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 165 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 217

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 218 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 275

Query: 122 LK 123
           + 
Sbjct: 276 MS 277


>gi|168031987|ref|XP_001768501.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680214|gb|EDQ66652.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 331

 Score =  157 bits (398), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +         K  +++   ++ EA  +E  +  E +    VG+N
Sbjct: 201 RDEGLHCDFACLLYTLLI-------NKLSEERVYEIVCEAVEIEREFVCEALSCDLVGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                +Y+ F+A+R    +G    +    NPF WM E+I L+ + NFFE RV EYQ+ + 
Sbjct: 254 KILMSEYIDFVADRLLVSLGYRKKYNAL-NPFDWM-ELISLQGKTNFFEKRVGEYQKASV 311

Query: 122 LK 123
           + 
Sbjct: 312 MS 313


>gi|302497417|ref|XP_003010709.1| hypothetical protein ARB_03411 [Arthroderma benhamiae CBS 112371]
 gi|291174252|gb|EFE30069.1| hypothetical protein ARB_03411 [Arthroderma benhamiae CBS 112371]
          Length = 408

 Score =  157 bits (398), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +        ++ EA  +E  +  + +P   +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLNYRPDPSAVEAIITEAVTIEQEFLTDALPCALLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G +  +  T NPF +M   I L  + NFFE RV +YQ+   
Sbjct: 325 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMD-NISLAGKTNFFEKRVGDYQKAGV 382

Query: 122 L 122
           +
Sbjct: 383 M 383


>gi|326916502|ref|XP_003204546.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Meleagris gallopavo]
          Length = 339

 Score =  157 bits (398), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +         K  +++ + ++  A L+E  +  E +P   +G+N
Sbjct: 214 RDEGLHCDFACLMFKHLIR-------KPSEERVKEIIMNAVLIEQEFLTEALPVKLIGMN 266

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 267 CTLMKQYIEFVADRLMLELGFRKIYK-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 324

Query: 122 LK 123
           + 
Sbjct: 325 MS 326


>gi|327298815|ref|XP_003234101.1| ribonucleotide reductase small subunit RnrA [Trichophyton rubrum
           CBS 118892]
 gi|326464279|gb|EGD89732.1| ribonucleotide reductase small subunit RnrA [Trichophyton rubrum
           CBS 118892]
          Length = 408

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +        ++ EA  +E  +  + +P   +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLNYRPDPSAVEAIITEAVTIEQEFLTDALPCALLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G +  +  T NPF +M   I L  + NFFE RV +YQ+   
Sbjct: 325 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMD-NISLAGKTNFFEKRVGDYQKAGV 382

Query: 122 L 122
           +
Sbjct: 383 M 383


>gi|7023557|dbj|BAA92005.1| unnamed protein product [Homo sapiens]
          Length = 351

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 41/121 (33%), Positives = 70/121 (57%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGVN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A 
Sbjct: 279 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336

Query: 122 L 122
           +
Sbjct: 337 M 337


>gi|190896570|gb|ACE96798.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896582|gb|ACE96804.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEEQVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNAA-NPFDWM-ELISLQGKTNFFEKRVGEY 223


>gi|168015485|ref|XP_001760281.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688661|gb|EDQ75037.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 330

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +          L  K  + +   ++ EA ++E  +  E +    VG+N
Sbjct: 200 RDEGLHCDFACLLYTL-------LNNKLSEDRVYEIVCEAVVIEQEFVCEALSCDLVGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                +Y+ F+A+R    +G    +  + NPF WM E+I L+ + NFFE RV EYQ+ + 
Sbjct: 253 KTLMSEYIDFVADRLLVSLGYPKKYN-SHNPFDWM-ELISLQGKTNFFEKRVGEYQKASV 310

Query: 122 LK 123
           + 
Sbjct: 311 MS 312


>gi|37551487|gb|AAQ93139.1| ribonucleotide reductase small subunit [Vaccinia virus]
 gi|38348909|gb|AAR17885.1| ribonucleotide reductase small subunit [Vaccinia virus]
 gi|88900660|gb|ABD57572.1| VACV040 [Vaccinia virus]
 gi|90819703|gb|ABD98513.1| VACV-DUKE-051 [Vaccinia virus]
          Length = 319

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R ++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRYIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305

Query: 122 LK 123
           + 
Sbjct: 306 MS 307


>gi|193784694|dbj|BAG53847.1| unnamed protein product [Homo sapiens]
 gi|193787382|dbj|BAG52588.1| unnamed protein product [Homo sapiens]
          Length = 297

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 172 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 224

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 225 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 282

Query: 122 LK 123
           + 
Sbjct: 283 MS 284


>gi|190896572|gb|ACE96799.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896574|gb|ACE96800.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896576|gb|ACE96801.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896578|gb|ACE96802.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEEQVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFFEKRVGEY 223


>gi|296809816|ref|XP_002845246.1| ribonucleotide reductase [Arthroderma otae CBS 113480]
 gi|238842634|gb|EEQ32296.1| ribonucleotide reductase [Arthroderma otae CBS 113480]
          Length = 405

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +        ++ EA  +E  +  + +P   +G+N
Sbjct: 269 RDEGLHTDFACLLFS-------HLNYRPDPTAVEAIITEAVSIEQEFLTDALPCALLGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G +  +  T NPF +M   I L  + NFFE RV +YQ+   
Sbjct: 322 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMD-NISLAGKTNFFEKRVGDYQKAGV 379

Query: 122 L 122
           +
Sbjct: 380 M 380


>gi|325953830|ref|YP_004237490.1| ribonucleoside-diphosphate reductase [Weeksella virosa DSM 16922]
 gi|323436448|gb|ADX66912.1| Ribonucleoside-diphosphate reductase [Weeksella virosa DSM 16922]
          Length = 323

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 39/120 (32%), Positives = 65/120 (54%), Gaps = 8/120 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  ++  + ++ +A  +E  +  E +P   +G+N
Sbjct: 196 RDEGLHCDFACLLY------VNHLKNKLPEETVQKIIADAVEVEKEFVTEALPVRLIGMN 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G + ++  T NPF +M E+I L+ + NFFE RV EYQ+   
Sbjct: 250 AELMCQYIEFVADRLLDALGCKKVWNAT-NPFDFM-ELISLQGKTNFFERRVGEYQKSGV 307


>gi|255954081|ref|XP_002567793.1| Pc21g07530 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211589504|emb|CAP95650.1| Pc21g07530 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 400

 Score =  157 bits (397), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       H+  +   +    ++ EA  +E  +  + +P   +G+N
Sbjct: 264 RDEGLHTDFACLLFS-------HMNHRPDPKVVEEIIVEAVGIEQEFLTDALPCALLGMN 316

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G +  +    NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 317 SKLMCQYIEFVADRLLVALGNKKYYNSA-NPFDFM-ESISLAGKTNFFEKRVGDYQKAGV 374

Query: 122 L 122
           +
Sbjct: 375 M 375


>gi|190896568|gb|ACE96797.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896580|gb|ACE96803.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  157 bits (397), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEEQVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNAA-NPFDWM-ELISLQGKTNFFEKRVGEY 223


>gi|168049349|ref|XP_001777126.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671569|gb|EDQ58119.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 325

 Score =  157 bits (397), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +          L  K  + +   ++ EA  +E  +  E +    VG+N
Sbjct: 197 RDEGLHCDFACLLYTL-------LNNKLSEDRVHEIVCEAVDIEREFVCEALSCDLVGMN 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                +Y+ F+A+R    +G    +    NPF WM E+I L+ + NFFE RV EYQ+ + 
Sbjct: 250 KIMMSEYIDFVADRLLVSLGYNKRYN-ARNPFDWM-ELISLQGKTNFFEKRVGEYQKASV 307

Query: 122 LK 123
           + 
Sbjct: 308 MS 309


>gi|332247270|ref|XP_003272776.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           isoform 2 [Nomascus leucogenys]
 gi|332247272|ref|XP_003272777.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           isoform 3 [Nomascus leucogenys]
          Length = 297

 Score =  157 bits (397), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 172 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 224

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 225 CILMKQYIEFVADRLMLELGFGKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 282

Query: 122 LK 123
           + 
Sbjct: 283 MS 284


>gi|294890631|ref|XP_002773236.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239878288|gb|EER05052.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 350

 Score =  157 bits (397), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 8/121 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N +       +T+   ++   ++  A  +E  +  E++P   +G+N
Sbjct: 208 RDEGLHADFACLLYNMMH------YTRLPDERVHEIVRGAVDVERVFISESLPVSLIGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    +Y++F+A+R    +G   L+  T NPF WM  +I L+ + NFFE RV EYQ+G  
Sbjct: 262 SQLMCRYIEFVADRLLVALGHPKLYNAT-NPFDWMK-MISLQGKTNFFEKRVGEYQKGGV 319

Query: 122 L 122
           +
Sbjct: 320 M 320


>gi|46446983|ref|YP_008348.1| ribonucleoside-diphosphate reductase small chain [Candidatus
           Protochlamydia amoebophila UWE25]
 gi|46400624|emb|CAF24073.1| probable ribonucleoside-diphosphate reductase small chain
           [Candidatus Protochlamydia amoebophila UWE25]
          Length = 323

 Score =  157 bits (397), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +Q+  + P        +  + ++  A  +E  +  + +P   +G+N
Sbjct: 198 RDEGLHCDFACLLYSQLNNKLP-------LETLQAIISHAVAIEKEFVQDALPVRLIGMN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G   L+   +NPF +M  +I +  + NFFE RV+EYQ+   
Sbjct: 251 ATLMCQYIEFVADRLLVALGSPKLYN-VDNPFDFMD-LISMPGKTNFFERRVSEYQKSGV 308

Query: 122 LK 123
           + 
Sbjct: 309 MS 310


>gi|241951066|ref|XP_002418255.1| ribonucleoside-diphosphate reductase small chain 1, putative;
           ribonucleotide reductase r2 subunit 1, putative;
           ribonucleotide reductase small subunit 1, putative
           [Candida dubliniensis CD36]
 gi|223641594|emb|CAX43555.1| ribonucleoside-diphosphate reductase small chain 1, putative
           [Candida dubliniensis CD36]
          Length = 413

 Score =  156 bits (396), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  +   +    ++ EA  +E  Y  + +P   +G+N
Sbjct: 285 RDEGLHTDFACLLF-------AHLQNRPSPEIVEKIITEAVDVEKEYFTDALPVSLLGMN 337

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G + ++  T NPF +M E I L  + NFFE RV++YQ+   
Sbjct: 338 CNLMCQYIEFVADRLLLALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 395

Query: 122 L 122
           +
Sbjct: 396 M 396


>gi|194474072|ref|NP_001124015.1| ribonucleoside-diphosphate reductase subunit M2 B [Rattus
           norvegicus]
 gi|149066498|gb|EDM16371.1| ribonucleotide reductase M2 B (TP53 inducible) (predicted) [Rattus
           norvegicus]
          Length = 351

 Score =  156 bits (396), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 40/121 (33%), Positives = 68/121 (56%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++   ++ +A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVMEIIVDAVKIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R   ++G   +F   ENPF +M E I L+ + NFFE RV+EYQ+ A 
Sbjct: 279 CVLMKQYIEFVADRLLGELGFSKIF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336

Query: 122 L 122
           +
Sbjct: 337 M 337


>gi|224100309|ref|XP_002311826.1| predicted protein [Populus trichocarpa]
 gi|222851646|gb|EEE89193.1| predicted protein [Populus trichocarpa]
          Length = 342

 Score =  156 bits (396), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ +          QK   ++ EA  +E  +  E +P   +G+N
Sbjct: 213 RDEGLHCDFACLLYSLLQRQLHW-------QKVYHIVGEAVEIETKFVCEALPCALIGMN 265

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A     Y++F+A+R    +G +  +   ENPF WM E I L+ + NFFE RV +YQ+ + 
Sbjct: 266 ATLMGDYIKFVADRLLVALGYQKKYN-VENPFDWM-EFISLQGKANFFERRVGDYQKASV 323

Query: 122 LK 123
           + 
Sbjct: 324 MS 325


>gi|45184688|ref|NP_982406.1| AAL136Cp [Ashbya gossypii ATCC 10895]
 gi|44980034|gb|AAS50230.1| AAL136Cp [Ashbya gossypii ATCC 10895]
          Length = 422

 Score =  156 bits (396), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K   +    ++ EA  +E  Y  + +P   +G+N
Sbjct: 292 RDEGLHTDFACLLF-------AHLNNKPDTEIVEKIITEAVEIEKRYFQDAIPVALLGMN 344

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G +  +  + NPF +M E I L  + NFFE RV++YQ+   
Sbjct: 345 SSLMNQYVEFVADRLLVALGNKKYYNVS-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 402

Query: 122 L 122
           +
Sbjct: 403 M 403


>gi|254442775|ref|ZP_05056251.1| ribonucleoside-diphosphate reductase, beta subunit
           [Verrucomicrobiae bacterium DG1235]
 gi|198257083|gb|EDY81391.1| ribonucleoside-diphosphate reductase, beta subunit
           [Verrucomicrobiae bacterium DG1235]
          Length = 361

 Score =  156 bits (396), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 50/123 (40%), Positives = 76/123 (61%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES H+    ++   +  ENP +WT EF+ + R  + EA  LE  +  + +P   +GL
Sbjct: 232 LRDESNHIELLRNLFMDLIEENPDVWTPEFKAELRDAMSEAIALEKEFIADCLPVDSIGL 291

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                 QY+ +IA+RR    GL+PL     NP PW++E++D+KKE+NFFE RVTEYQ+ +
Sbjct: 292 RKEDFVQYIDYIADRRLEGCGLDPLTPGVTNPLPWLAEMMDIKKEQNFFEGRVTEYQKAS 351

Query: 121 ELK 123
            L+
Sbjct: 352 SLE 354


>gi|17974949|ref|NP_536463.1| C10L [Monkeypox virus Zaire-96-I-16]
 gi|17529816|gb|AAL40494.1|AF380138_36 C10L [Monkeypox virus Zaire-96-I-16]
 gi|51342196|gb|AAU01240.1| MPXV-WRAIR030 [Monkeypox virus]
 gi|58220500|gb|AAW67788.1| MPXV-SL-030 [Monkeypox virus]
 gi|59858836|gb|AAX09131.1| MPXV-COP-030 [Monkeypox virus]
 gi|68448710|gb|AAY96833.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|68448912|gb|AAY97034.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|68449113|gb|AAY97234.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|68449313|gb|AAY97433.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|68449512|gb|AAY97631.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|300872658|gb|ADK39060.1| ribonucleotide reductase small subunit [Monkeypox virus]
          Length = 319

 Score =  156 bits (396), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R ++  A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRFIITNAVSIEQEFLTVALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305

Query: 122 LK 123
           + 
Sbjct: 306 MS 307


>gi|323098642|gb|ADX22879.1| ribonucleotide reductase small subunit [Monkeypox virus]
          Length = 319

 Score =  156 bits (396), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R ++  A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRFIITNAVSIEQEFLTVALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305

Query: 122 LK 123
           + 
Sbjct: 306 MS 307


>gi|322499081|emb|CBZ34153.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 269

 Score =  156 bits (396), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 8/119 (6%)

Query: 5   SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPS 64
            LH +F   + N       H+  K  +++   ++ +A  +E  +  + +P   +G+NA  
Sbjct: 145 GLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMNAEL 198

Query: 65  CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAELK 123
             QY++F+A+R    +G E  ++ T+ PF +M E+I L+ + NFFE +V EYQ+   + 
Sbjct: 199 MAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAGVMS 255


>gi|323098445|gb|ADX22683.1| ribonucleotide reductase small subunit [Monkeypox virus]
          Length = 319

 Score =  156 bits (396), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R ++  A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRFIITNAVSIEQEFLTVALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305

Query: 122 LK 123
           + 
Sbjct: 306 MS 307


>gi|328771482|gb|EGF81522.1| hypothetical protein BATDEDRAFT_16297 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 336

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +          L  K      + ++HEA  +E  ++ E++P   +G+N
Sbjct: 210 RDEGLHTDFACLLFTL-------LNNKPTDSVIQQIIHEAVTIEQEFSTESLPVALIGMN 262

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A   +QY++F+A+R   ++G+   +    NPF +M  +I L+ + NFFE RV EYQ+   
Sbjct: 263 ANLMKQYIEFVADRLFIELGMPKKY-GVGNPFDFMD-MISLQGKTNFFEKRVGEYQKSGV 320

Query: 122 LK 123
           + 
Sbjct: 321 MN 322


>gi|196233679|ref|ZP_03132520.1| Ribonucleoside-diphosphate reductase [Chthoniobacter flavus
           Ellin428]
 gi|196222349|gb|EDY16878.1| Ribonucleoside-diphosphate reductase [Chthoniobacter flavus
           Ellin428]
          Length = 390

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 50/123 (40%), Positives = 71/123 (57%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES H+  G  ++ Q+  ENP +WT EF+ +    + E   LE  +  + +P+  VG+
Sbjct: 260 LRDESNHIELGRYILTQLIAENPDIWTPEFRAELVEFMREGVELEKEFVRDCLPEDGVGM 319

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                  Y+++ A+RR   + L  L     NPF W+ EVI L+KEKNFFETRVTEYQ   
Sbjct: 320 TQADFLTYVEYNADRRLAGLDLPALSGVKTNPFAWLDEVIFLRKEKNFFETRVTEYQTSG 379

Query: 121 ELK 123
            LK
Sbjct: 380 SLK 382


>gi|50311465|ref|XP_455757.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644893|emb|CAG98465.1| KLLA0F15103p [Kluyveromyces lactis]
          Length = 401

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K   +    ++ EA  +E  Y  + +P   +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPNPEIVEKIITEAVEIEKRYFMDALPVSLLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G +  F  T NPF +M E I L  + NFFE RV++YQ+   
Sbjct: 324 ADLMNQYVEFVADRLLVALGNKKYFNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381

Query: 122 L 122
           +
Sbjct: 382 I 382


>gi|71083845|ref|YP_266565.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Pelagibacter ubique HTCC1062]
 gi|71062958|gb|AAZ21961.1| ribonucleoside-diphosphate reductase beta chain [Candidatus
           Pelagibacter ubique HTCC1062]
          Length = 337

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 1/122 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH N  I +  +   ENP +WT E + +           E A+       G   G
Sbjct: 207 VRDETLHCNSMIRLFKEFIHENPEIWTPELKAELYKACRTIIEHEDAFIDLAFEMGPMQG 266

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A   + Y++FIANRR  Q+GLEP++   +NP  W+  +++  +  NFFE R TEY + 
Sbjct: 267 LTAQDVKLYIRFIANRRLSQLGLEPIYDVDKNPLTWLDSMLNAVEHMNFFEGRSTEYSKA 326

Query: 120 AE 121
           A 
Sbjct: 327 AT 328


>gi|58040422|ref|YP_192386.1| ribonucleotide-diphosphate reductase subunit beta [Gluconobacter
           oxydans 621H]
 gi|58002836|gb|AAW61730.1| Ribonucleoside-diphosphate reductase beta chain [Gluconobacter
           oxydans 621H]
          Length = 339

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 39/127 (30%), Positives = 69/127 (54%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH    I +      EN  +WT EF+++   +       E A+       G   G
Sbjct: 204 VRDETLHCLSMIRLFRTFVRENSEIWTPEFREELTQICRTTVEHEDAFIDLCFEMGPVEG 263

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +++   ++Y++FIA+RR  Q+GL+P++    NP PW+ ++++  +  NFFE R TEY + 
Sbjct: 264 MSSEDVKRYIRFIADRRLTQLGLDPVYGQESNPLPWIDDMLNAVEHANFFENRSTEYSRA 323

Query: 120 A-ELKWD 125
           +    W+
Sbjct: 324 STSGTWE 330


>gi|68481406|ref|XP_715342.1| hypothetical protein CaO19.5801 [Candida albicans SC5314]
 gi|68481537|ref|XP_715277.1| hypothetical protein CaO19.13223 [Candida albicans SC5314]
 gi|46436893|gb|EAK96248.1| hypothetical protein CaO19.13223 [Candida albicans SC5314]
 gi|46436961|gb|EAK96315.1| hypothetical protein CaO19.5801 [Candida albicans SC5314]
 gi|238882096|gb|EEQ45734.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
           albicans WO-1]
          Length = 413

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  +   +    ++ EA  +E  Y  + +P   +G+N
Sbjct: 285 RDEGLHTDFACLLF-------AHLQNRPSPEIVERIITEAVDVEKEYFTDALPVSLLGMN 337

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G + ++  T NPF +M E I L  + NFFE RV++YQ+   
Sbjct: 338 CNLMCQYIEFVADRLLLALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 395

Query: 122 L 122
           +
Sbjct: 396 M 396


>gi|91763118|ref|ZP_01265082.1| ribonucleotide-diphosphate reductase beta subunit [Candidatus
           Pelagibacter ubique HTCC1002]
 gi|91717531|gb|EAS84182.1| ribonucleotide-diphosphate reductase beta subunit [Candidatus
           Pelagibacter ubique HTCC1002]
          Length = 342

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 1/122 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH N  I +  +   ENP +WT E + +           E A+       G   G
Sbjct: 212 VRDETLHCNSMIRLFKEFIHENPEIWTPELKAELYKACRTIIEHEDAFIDLAFEMGPMQG 271

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A   + Y++FIANRR  Q+GLEP++   +NP  W+  +++  +  NFFE R TEY + 
Sbjct: 272 LTAQDVKLYIRFIANRRLSQLGLEPIYDVDKNPLTWLDSMLNAVEHMNFFEGRSTEYSKA 331

Query: 120 AE 121
           A 
Sbjct: 332 AT 333


>gi|303272255|ref|XP_003055489.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226463463|gb|EEH60741.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 322

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 66/121 (54%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K            ++ + ++ +A  +E  +  + +    VG+N
Sbjct: 192 RDEGLHCDFACLLYSMLKH-------PLEPERLQEIVKDAVEIEKEFVCDALSCALVGMN 244

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    +Y++F+A+R   Q+G++ ++  T NPF WM E I L+ + NFFE RV EYQ+   
Sbjct: 245 ADLMSEYIEFVADRLLVQLGVDKVWN-TPNPFDWM-ESISLQGKTNFFERRVGEYQRNGV 302

Query: 122 L 122
           +
Sbjct: 303 M 303


>gi|307192386|gb|EFN75622.1| Ribonucleoside-diphosphate reductase subunit M2 [Harpegnathos
           saltator]
          Length = 344

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  K   ++ +T++ +A  +E  +  + +P   +G+N
Sbjct: 214 RDEGLHCDFACLMFK-------HVIQKPSFERVKTIIMDAVEIEKEFLTQALPVKLIGMN 266

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                 Y++F+A+R    +G + ++  +ENPF +M   I L+ + NFFE +V EY++   
Sbjct: 267 CTLMCTYIEFVADRLFVALGFDKVYN-SENPFSFMD-FISLEGKTNFFEKKVGEYKKFGV 324

Query: 122 LK 123
           ++
Sbjct: 325 ME 326


>gi|195436539|ref|XP_002066225.1| GK22247 [Drosophila willistoni]
 gi|194162310|gb|EDW77211.1| GK22247 [Drosophila willistoni]
          Length = 395

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 66/121 (54%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +         HL  +  +++   ++ +A  +E  +    +P   +G+N
Sbjct: 270 RDEGLHCDFAVLMFQ-------HLVQRPSRERIIEIIRDAVQIEQEFLTVALPVNLIGMN 322

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFFE +V EYQ+   
Sbjct: 323 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFSFM-EMISLDGKTNFFEKKVGEYQRMGV 380

Query: 122 L 122
           +
Sbjct: 381 V 381


>gi|46122063|ref|XP_385585.1| hypothetical protein FG05409.1 [Gibberella zeae PH-1]
          Length = 399

 Score =  155 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K        +  +Q  + ++ +A  +E  +  E +P   +G+N
Sbjct: 262 RDEGLHTDFACLLHSHLKG-------RASKQMIQDIITDAVSIEQEFLTEALPCALLGMN 314

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +   +QY++F+A+R    +G E ++K + NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 315 SNLMKQYIEFVADRLLVALGNEKVYK-STNPFDFM-ENISLGGKTNFFEKRVADYQKAGV 372

Query: 122 L 122
           L
Sbjct: 373 L 373


>gi|79160106|gb|AAI08038.1| Rrm2b protein [Danio rerio]
          Length = 349

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH NF   + + +         K    +   ++ +A  +E  +  E +P   +G+N
Sbjct: 224 RDEGLHCNFACLMYSYLVK-------KPSVDRVNDIIAKAVSIEQEFLTEALPVNLIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R    +GL   +  +ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 277 CSLMKQYIEFVADRLLTDLGLPKAY-CSENPFDFM-ESISLEGKTNFFEKRVAEYQRLGV 334

Query: 122 LK 123
           + 
Sbjct: 335 MS 336


>gi|301166951|emb|CBW26530.1| putative ribonucleoside-diphosphate reductase small chain subunit
           [Bacteriovorax marinus SJ]
          Length = 322

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 7/123 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F   +   +  E      +  ++    ++ EA  +E  +  E +P   +G+N
Sbjct: 195 RDEGLHCEFACHIHELLTPEE-----QLNKETITQIITEAVSIEKEFITEAIPVSLIGMN 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    +Y++F+A+   +++G E  +  TENPF WM E+I L+ + NFFE RV+EYQ+   
Sbjct: 250 ADMMSRYIEFVADYWLNRLGCEKAYN-TENPFDWM-ELISLEGKTNFFEKRVSEYQKPGV 307

Query: 122 LKW 124
           L  
Sbjct: 308 LGD 310


>gi|195172750|ref|XP_002027159.1| GL20023 [Drosophila persimilis]
 gi|198459455|ref|XP_001361381.2| GA21447 [Drosophila pseudoobscura pseudoobscura]
 gi|194112972|gb|EDW35015.1| GL20023 [Drosophila persimilis]
 gi|198136695|gb|EAL25959.2| GA21447 [Drosophila pseudoobscura pseudoobscura]
          Length = 391

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 68/122 (55%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + + +       HL  +  +++   ++ +A  +E  +  E +P   +G+N
Sbjct: 266 RDEGLHCDFAVLMYH-------HLVQRPKRERIIEIIRDAVEIEQEFLTEALPVNLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFFE +V EYQ+   
Sbjct: 319 CVLMSQYIEFVADRLLGELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVAEYQRMGV 376

Query: 122 LK 123
           + 
Sbjct: 377 VT 378


>gi|322795965|gb|EFZ18591.1| hypothetical protein SINV_11129 [Solenopsis invicta]
          Length = 426

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   I         K   +  ++++ +A  +E  +  + +P   +G+N
Sbjct: 296 RDEGLHCDFACLIFKHIIQ-------KPSFEHVKSIIMDAVEIEKEFLTQALPVELIGMN 348

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                 Y++F+A+R    +G E ++  +ENPF +M+  I L+ + NFFE +V EY++   
Sbjct: 349 CSLMCNYIEFVADRLFVALGFEKVYN-SENPFSFMN-FISLEGKTNFFEKKVGEYKKFGV 406

Query: 122 LK 123
           ++
Sbjct: 407 VE 408


>gi|302783485|ref|XP_002973515.1| hypothetical protein SELMODRAFT_173451 [Selaginella moellendorffii]
 gi|302787555|ref|XP_002975547.1| hypothetical protein SELMODRAFT_175019 [Selaginella moellendorffii]
 gi|300156548|gb|EFJ23176.1| hypothetical protein SELMODRAFT_175019 [Selaginella moellendorffii]
 gi|300158553|gb|EFJ25175.1| hypothetical protein SELMODRAFT_173451 [Selaginella moellendorffii]
          Length = 347

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 64/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + + +       K  +++ + ++ +A  +E  +  E +    VG+N
Sbjct: 217 RDEGLHCDFACLLYSLLNV-------KLDEKRVKEIVSDAVEIERQFVCEALSCDLVGMN 269

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY+ F+A+R    +G   LF    NPF WM  +I L+ + NFFE RV EYQ+ + 
Sbjct: 270 ARLMSQYIDFVADRLMVVLGYNKLFNAI-NPFDWMD-LISLQGKTNFFEKRVGEYQKASV 327

Query: 122 L 122
           +
Sbjct: 328 M 328


>gi|18640273|ref|NP_570429.1| CMLV039 [Camelpox virus]
 gi|18482949|gb|AAL73746.1|AF438165_36 ribonucleotide reductase small subunit [Camelpox virus M-96]
 gi|19717972|gb|AAG37497.1| CMP39L [Camelpox virus CMS]
          Length = 319

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++   +++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVISIITDAVSIEQEFLTVALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + Y++F+A+R   ++G + ++    NPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVI-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305

Query: 122 LK 123
           + 
Sbjct: 306 MS 307


>gi|55742360|ref|NP_001007164.1| ribonucleoside-diphosphate reductase subunit M2 B [Danio rerio]
 gi|29561808|emb|CAD87804.1| novel protein similar to vertebrate ribonucleotide reductase M2 B
           (TP53 inducible) (RRM2B) [Danio rerio]
          Length = 349

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH NF   + + +         K    +   ++ +A  +E  +  E +P   +G+N
Sbjct: 224 RDEGLHCNFACLIYSYLVK-------KPSVDRVNDIIAKAVSIEQEFLTEALPVNLIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+A+R    +GL   +  +ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 277 CSLMKQYIEFVADRLLTDLGLPKAY-CSENPFDFM-ESISLEGKTNFFEKRVAEYQRLGV 334

Query: 122 LK 123
           + 
Sbjct: 335 MS 336


>gi|255711354|ref|XP_002551960.1| KLTH0B03938p [Lachancea thermotolerans]
 gi|238933338|emb|CAR21522.1| KLTH0B03938p [Lachancea thermotolerans]
          Length = 403

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K        ++ EA  +E  Y  + +P   +G+N
Sbjct: 273 RDEGLHTDFACLLF-------AHLKNKPDPAIIERIITEAVEIEQRYFRDALPVSLLGMN 325

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G +  +  T NPF +M E I L  + NFFE RV++YQ+   
Sbjct: 326 ADLMNQYVEFVADRLLVALGNQKFYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 383

Query: 122 L 122
           +
Sbjct: 384 M 384


>gi|110802082|ref|YP_699620.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           perfringens SM101]
 gi|110682583|gb|ABG85953.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens SM101]
          Length = 344

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I ++K E P ++TKE +++ R M+      EIA+ H  +     G+N
Sbjct: 218 RDENTHLWLFRSIIKELKEEIPEVFTKELKEELREMMRTGVEHEIAWGHYVIGDNVTGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
               E+Y+++I N R   IGLEPLF+ Y ENP PW+    D  + + +FFE + T Y + 
Sbjct: 278 KNLIERYIKYIGNLRAKAIGLEPLFEGYNENPAPWVDYYADANQVKTDFFEAKSTAYAKA 337

Query: 120 AELKWD 125
             L  D
Sbjct: 338 GALIDD 343


>gi|221120499|ref|XP_002159812.1| PREDICTED: similar to hCG23833 [Hydra magnipapillata]
          Length = 387

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  K  +++ + ++ +A  +EI +  E++P   +G+N
Sbjct: 255 RDEGLHCDFACLMYK-------HIVNKPSEERVKQIIRDAVAIEIEFLTESLPCDLLGMN 307

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + Y++F A+R  + +G    +   ENPF +M E I L ++ NFFE+RV++YQ+   
Sbjct: 308 KSLMKTYIEFCADRLINALGYSKEWN-VENPFDFM-ENISLARKANFFESRVSDYQKAGV 365

Query: 122 LK 123
           + 
Sbjct: 366 MD 367


>gi|302696699|ref|XP_003038028.1| hypothetical protein SCHCODRAFT_12788 [Schizophyllum commune H4-8]
 gi|300111725|gb|EFJ03126.1| hypothetical protein SCHCODRAFT_12788 [Schizophyllum commune H4-8]
          Length = 377

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 9/120 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H  F   + +       HL  +      + ++ EA  +E  +  + +P   +G+N
Sbjct: 257 RDEGMHTEFACLLFS-------HLRHRPHPSVVQRIVKEAVAIEHEFLSDALPVSLIGMN 309

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R  + +G   ++  T NPF +M  +I L+ + NFFE RV+EY +   
Sbjct: 310 AALMRQYIEFVADRLLYSLGQNKIYNAT-NPFDFMD-MISLQGKTNFFEKRVSEYAKANV 367


>gi|195119943|ref|XP_002004488.1| GI19586 [Drosophila mojavensis]
 gi|193909556|gb|EDW08423.1| GI19586 [Drosophila mojavensis]
          Length = 393

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +         HL  +  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHCDFAVMMFR-------HLVQRPSRERIIEIISDAVTIEQEFLTDALPVNLIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFFE +V EYQ+   
Sbjct: 321 CALMSQYIEFVADRLLVELGVGKIYN-TKNPFTFM-EMISLDGKTNFFEKKVGEYQRMGV 378

Query: 122 LK 123
             
Sbjct: 379 TS 380


>gi|156087150|ref|XP_001610982.1| ribonucleoside-diphosphate reductase small subunit [Babesia bovis
           T2Bo]
 gi|154798235|gb|EDO07414.1| ribonucleoside-diphosphate reductase small subunit, putative
           [Babesia bovis]
          Length = 339

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 41/121 (33%), Positives = 73/121 (60%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +FG  + +++K + P        +  + ++ EA  +E  +  +++P   +G+N
Sbjct: 214 RDEGLHADFGCFIYSKLKHKLP-------AECVQQIIKEAVAVERVFVCDSLPTDLIGMN 266

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G+ P++K T+NPF WM E+I ++ + NFFE RV EYQ+   
Sbjct: 267 SMLMAQYIEFVADRLLQALGVPPVYK-TKNPFEWM-ELISVQGKTNFFEKRVGEYQKSGI 324

Query: 122 L 122
           L
Sbjct: 325 L 325


>gi|194883840|ref|XP_001976005.1| GG22616 [Drosophila erecta]
 gi|190659192|gb|EDV56405.1| GG22616 [Drosophila erecta]
          Length = 393

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +   +     H       ++   ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHCDFAVLMFQHLVQRPKH-------ERIIEIIRDAVAIEQEFLTDALPVNLIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFFE +V EYQ+   
Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVAEYQRMGV 378

Query: 122 LK 123
             
Sbjct: 379 AS 380


>gi|303278144|ref|XP_003058365.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459525|gb|EEH56820.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 338

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       +L  K      R ++ EA  +E  +  + +P   VG+N
Sbjct: 208 RDEGLHRDFACLLYS-------YLQNKPDVSIVRQIVCEAVEIEKEFVCDALPVSLVGMN 260

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                +Y++F+A+    Q+GLE  +    NPF +M E+I L+ + NFFE RV EYQ+   
Sbjct: 261 KDLMSEYIEFVADHLLGQLGLEKEYNTV-NPFEFM-ELISLQGKTNFFEKRVGEYQKSGV 318

Query: 122 L 122
           +
Sbjct: 319 M 319


>gi|74025548|ref|XP_829340.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|70834726|gb|EAN80228.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
          Length = 337

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 62/122 (50%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         ++  K  + +   ++  A  +E  +  + +P   +G+N
Sbjct: 210 RDEGLHTDFACLLY------EKYIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G +     ++NPF +M  +I L+ + NFFE +V EYQ+   
Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHCN-SKNPFDFMD-MISLQGKTNFFEKKVGEYQKAGV 321

Query: 122 LK 123
           + 
Sbjct: 322 MS 323


>gi|4836362|gb|AAD30422.1|AF117061_1 ribonucleotide reductase R2 subunit [Aedes albopictus]
          Length = 398

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  Q++   ++ EA L+E  +  + +P   +G+N
Sbjct: 273 RDEGLHTDFACLMFK-------YLVQKPSQERVIEIIREAVLIEQEFLTKALPVDLLGMN 325

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F A+R   ++G++ ++  T+NPF +M E I L+ + NFFE +V EYQ+   
Sbjct: 326 CELMSQYIEFEADRLLLELGIDKIYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQKWGV 383

Query: 122 L 122
           +
Sbjct: 384 M 384


>gi|290977320|ref|XP_002671386.1| predicted protein [Naegleria gruberi]
 gi|284084954|gb|EFC38642.1| predicted protein [Naegleria gruberi]
          Length = 338

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 68/122 (55%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K      +TK  QQ   +++ EA  +E  +  E++P   +G+N
Sbjct: 212 RDEGLHTDFACLLYSTLK------FTKLPQQVVHSLVSEAVEIEKEFICESLPVDLIGMN 265

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +   +QY++ +A+R    +G + ++  + NPF WM+ +I +  + NFFE +V EY +   
Sbjct: 266 SRLMQQYIEMVADRLLVSLGYDKIYN-SPNPFDWMN-IISVSGKTNFFEKKVGEYAKANI 323

Query: 122 LK 123
           + 
Sbjct: 324 MS 325


>gi|320164906|gb|EFW41805.1| ribonucleotide reductase m2 polypeptide [Capsaspora owczarzaki ATCC
           30864]
          Length = 352

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +          L  +        ++ +A  +E  +  + +P   +G+N
Sbjct: 227 RDEGLHCDFACMLFGL-------LNNRPSNADVLAIIKDAVAIEQEFLTDALPVALIGMN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + Y++F+A+R    +G E  +K  ENPF +M  +I L+ + NFFE RV EYQ+   
Sbjct: 280 GGLMKTYIEFVADRLLVALGQEKHYK-VENPFDFMD-LISLQGKTNFFERRVGEYQKPGV 337

Query: 122 LK 123
           + 
Sbjct: 338 MS 339


>gi|281200507|gb|EFA74725.1| ribonucleotide reductase small subunit [Polysphondylium pallidum
           PN500]
          Length = 335

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  +++        K       T++ +A   E  +  E++P   +G+N
Sbjct: 201 RDEGLHCDFACLLYQKLQ-------NKLDNNTIETIIRDAVACEKEFITESLPVDLIGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           + S  QY++F A+R    +G + ++  + NPF WM E+I L+++ NFFE +V+EYQ+   
Sbjct: 254 SRSMSQYIEFCADRLLLSLGYKKIYN-SSNPFDWM-EMISLQRKTNFFEGKVSEYQKSGV 311

Query: 122 LK 123
            K
Sbjct: 312 AK 313


>gi|68069763|ref|XP_676793.1| ribonucleotide reductase small subunit [Plasmodium berghei strain
           ANKA]
 gi|56496646|emb|CAI04349.1| ribonucleotide reductase small subunit, putative [Plasmodium
           berghei]
          Length = 158

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 69/121 (57%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P        +  + ++ EA  +E ++  E++P   +G+N
Sbjct: 33  RDEGLHTDFNCLIYSLLENKLPE-------EVVQNIVKEAVEVERSFICESLPCDLIGMN 85

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G   +F +++NPF WM  +I L+ + NFFE RV +YQ+   
Sbjct: 86  SRLMSQYIEFVADRLLECLGCSKVF-HSKNPFNWMD-LISLQGKTNFFEKRVADYQKSGV 143

Query: 122 L 122
           +
Sbjct: 144 M 144


>gi|254586079|ref|XP_002498607.1| ZYRO0G14388p [Zygosaccharomyces rouxii]
 gi|238941501|emb|CAR29674.1| ZYRO0G14388p [Zygosaccharomyces rouxii]
          Length = 412

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  +        ++ EA  +E  Y  + +P   +G+N
Sbjct: 284 RDEGLHTDFACLLF-------AHLKNRPSPDIVERIITEAVSIEKRYFEDALPVALLGMN 336

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G E  +  T NPF +M E I L  + NFFE RV++YQ+   
Sbjct: 337 AALMNQYVEFVADRLLVALGNEKYYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 394

Query: 122 LK 123
           + 
Sbjct: 395 MS 396


>gi|164659270|ref|XP_001730759.1| hypothetical protein MGL_1758 [Malassezia globosa CBS 7966]
 gi|159104657|gb|EDP43545.1| hypothetical protein MGL_1758 [Malassezia globosa CBS 7966]
          Length = 397

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 9/124 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K        +        ++ EA  +E  +  + +P   +G+N
Sbjct: 266 RDEGLHTDFACLLFSHLKK-------RAHPDTVNRIITEAVDIEQDFLTDALPVSLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G    +  + NPF +M E I L+ + NFFE RV +Y +   
Sbjct: 319 ARLMCQYIEFVADRLLVALGNPKHYN-STNPFDFM-ENISLQGKSNFFERRVGDYAKAGV 376

Query: 122 LKWD 125
            + D
Sbjct: 377 ARAD 380


>gi|160942848|ref|ZP_02090088.1| hypothetical protein FAEPRAM212_00325 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445900|gb|EDP22903.1| hypothetical protein FAEPRAM212_00325 [Faecalibacterium prausnitzii
           M21/2]
          Length = 347

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ E P L+T E  Q  R M+ E    EIA+ H  +     GLN
Sbjct: 219 RDENTHLWLFRNIITELQKEQPELFTAESVQALREMMREGVEQEIAWGHYVIGDDIPGLN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y++++ N R   +G   L+   E       W+S+  D    + +FFE R T Y 
Sbjct: 279 RQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVKTDFFEARSTAYA 338

Query: 118 QGAELKWD 125
           +   L  D
Sbjct: 339 KSTALIDD 346


>gi|195401438|ref|XP_002059320.1| GJ18335 [Drosophila virilis]
 gi|194142326|gb|EDW58732.1| GJ18335 [Drosophila virilis]
          Length = 394

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +         HL  +  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 269 RDEGLHCDFAVLMFQ-------HLVQRPCRERIIEIISDAVTIEQEFLTDALPVNLIGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                +Y++F+A+R   ++G+  L+  T+NPF +M E+I L  + NFFE +V EYQ+   
Sbjct: 322 CALMSEYIEFVADRLLVELGVGKLYN-TKNPFTFM-EMISLDGKTNFFEKKVGEYQRMGV 379

Query: 122 LK 123
             
Sbjct: 380 TS 381


>gi|15232077|ref|NP_189342.1| TSO2 (TSO meaning 'ugly' in Chinese); oxidoreductase/
           ribonucleoside-diphosphate reductase/ transition metal
           ion binding [Arabidopsis thaliana]
 gi|75273949|sp|Q9LSD0|RIR2C_ARATH RecName: Full=Ribonucleoside-diphosphate reductase small chain C;
           AltName: Full=Ribonucleoside-diphosphate reductase TSO2
           subunit; AltName: Full=Ribonucleotide reductase small
           subunit C
 gi|9279629|dbj|BAB01087.1| ribonucleotide reductase [Arabidopsis thaliana]
 gi|17380726|gb|AAL36193.1| putative ribonucleotide reductase small subunit [Arabidopsis
           thaliana]
 gi|21436297|gb|AAM51287.1| putative ribonucleotide reductase small subunit [Arabidopsis
           thaliana]
 gi|332643740|gb|AEE77261.1| Ribonucleoside-diphosphate reductase small chain C [Arabidopsis
           thaliana]
          Length = 332

 Score =  154 bits (390), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +    L TK  +++ ++++ +A  +E  +  + +P   VG+N
Sbjct: 201 RDEGLHCDFAC-------LLYTLLKTKLSEERVKSIVCDAVEIEREFVCDALPCALVGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G   ++  T NPF WM E+I L+ + NFFE RV +YQ+ + 
Sbjct: 254 RDLMSQYIEFVADRLLGALGYGKVYGVT-NPFDWM-ELISLQGKTNFFEKRVGDYQKASV 311

Query: 122 LK 123
           + 
Sbjct: 312 MS 313


>gi|294877483|ref|XP_002768004.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239870142|gb|EER00722.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 247

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 35/112 (31%), Positives = 63/112 (56%), Gaps = 8/112 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +FG  + N +K      +T+  +++   ++  A  +E  +  + +P G +G+N
Sbjct: 120 RDEGLHTDFGCLLYNMLK------FTRLPEERVEDIVRSAVNVEREFITDALPVGLIGMN 173

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 113
           A    +Y++F+A+R    +G   ++    NPF WM+ +I L+ + NFFE RV
Sbjct: 174 AELMGRYIEFVADRLLVALGYAKIYNSA-NPFDWMT-MISLQGKTNFFEKRV 223


>gi|313115920|ref|ZP_07801347.1| ribonucleoside-diphosphate reductase, beta subunit
           [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310621684|gb|EFQ05212.1| ribonucleoside-diphosphate reductase, beta subunit
           [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 347

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ E P L+T E  Q  R M+ E    EIA+ H  +     GLN
Sbjct: 219 RDENTHLWLFRNIITELQKEQPELFTAESVQALREMMREGVEQEIAWGHYVIGDDIPGLN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y++++ N R   +G   L+   E       W+S+  D    + +FFE R T Y 
Sbjct: 279 RQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVKTDFFEARSTAYA 338

Query: 118 QGAELKWD 125
           +   L  D
Sbjct: 339 KSTALIDD 346


>gi|295103295|emb|CBL00839.1| Ribonucleotide reductase, beta subunit [Faecalibacterium
           prausnitzii SL3/3]
          Length = 347

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ E P L+T E  Q  R M+ E    EIA+ H  +     GLN
Sbjct: 219 RDENTHLWLFRNIITELQKEQPELFTAESVQALREMMREGVEQEIAWGHYVIGDDIPGLN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y++++ N R   +G   L+   E       W+S+  D    + +FFE R T Y 
Sbjct: 279 RQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVKTDFFEARSTAYA 338

Query: 118 QGAELKWD 125
           +   L  D
Sbjct: 339 KSTALIDD 346


>gi|18311342|ref|NP_563276.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           perfringens str. 13]
 gi|110801267|ref|YP_697050.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           perfringens ATCC 13124]
 gi|168205189|ref|ZP_02631194.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens E str. JGS1987]
 gi|168210336|ref|ZP_02635961.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens B str. ATCC 3626]
 gi|168213271|ref|ZP_02638896.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens CPE str. F4969]
 gi|168216675|ref|ZP_02642300.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens NCTC 8239]
 gi|169347055|ref|ZP_02865997.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens C str. JGS1495]
 gi|182625797|ref|ZP_02953564.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens D str. JGS1721]
 gi|18146026|dbj|BAB82066.1| ribonucleoside-diphosphate reductase beta subunit [Clostridium
           perfringens str. 13]
 gi|110675914|gb|ABG84901.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens ATCC 13124]
 gi|169296738|gb|EDS78867.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens C str. JGS1495]
 gi|170663363|gb|EDT16046.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens E str. JGS1987]
 gi|170711548|gb|EDT23730.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens B str. ATCC 3626]
 gi|170715235|gb|EDT27417.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens CPE str. F4969]
 gi|177908953|gb|EDT71440.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens D str. JGS1721]
 gi|182381151|gb|EDT78630.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens NCTC 8239]
          Length = 344

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I ++K E P ++TKE +++ R M+      EIA+ H  +     G+N
Sbjct: 218 RDENTHLWLFRSIIKELKEEIPEVFTKELKEELREMVRTGVEHEIAWGHYVIGDNVTGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
               E+Y+++I N R   IGLEPLF+ Y ENP PW+    D  + + +FFE + T Y + 
Sbjct: 278 KNLIERYIKYIGNLRVKAIGLEPLFEGYNENPAPWVDYYADANQVKTDFFEAKSTAYAKA 337

Query: 120 AELKWD 125
             L  D
Sbjct: 338 GALIDD 343


>gi|312130971|ref|YP_003998311.1| ribonucleoside-diphosphate reductase [Leadbetterella byssophila DSM
           17132]
 gi|311907517|gb|ADQ17958.1| Ribonucleoside-diphosphate reductase [Leadbetterella byssophila DSM
           17132]
          Length = 328

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 8/120 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  +       +  K  +++  T++ +A  +E  +  + +P   +G+N
Sbjct: 202 RDEGLHRDFACLLYTKY------IVNKLPEEQVYTIIKDAVEIEKEFVSDALPVSLIGMN 255

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           AP   QY++F+A+     + L+ ++  T NPF +M  +I L+ + NFFE RV EYQ+   
Sbjct: 256 APQMCQYIEFVADHLLESLNLKKVYNAT-NPFDFMD-LISLQGKTNFFEKRVGEYQKAGV 313


>gi|18640102|ref|NP_570176.1| SPV016 ribonucleotide reductase, small subunit [Swinepox virus]
 gi|18448509|gb|AAL69755.1| SPV016 ribonucleotide reductase, small subunit [Swinepox virus]
          Length = 320

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++   +++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSKEVITSIIIDAVNIEKEFLTVAIPVDLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R   ++G E +F    NPF +M E I L+ + NFFE RV+EYQ+   
Sbjct: 248 CCLMSQYIEFVADRLLTELGCEKVFN-VYNPFSFM-EYISLEGKTNFFERRVSEYQKMGV 305

Query: 122 LK 123
             
Sbjct: 306 FT 307


>gi|50286273|ref|XP_445565.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524870|emb|CAG58476.1| unnamed protein product [Candida glabrata]
          Length = 400

 Score =  154 bits (389), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K   +    ++ EA  +E  Y  + +P   +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLNHKPDPEVVERIVTEAVEIEQRYFLDALPVALLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R     G + ++   ENPF +M E I L  + NFFE RV++YQ+   
Sbjct: 324 AQLMNQYVEFVADRLLVAFGNKKVYN-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381

Query: 122 LK 123
           + 
Sbjct: 382 MS 383


>gi|320580024|gb|EFW94247.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
           complex [Pichia angusta DL-1]
          Length = 408

 Score =  154 bits (389), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL           ++ EA  +E  Y  + +P   +G+N
Sbjct: 277 RDEGLHTDFACLLFS-------HLNNTPNNDIVLKIITEAVDIEKRYFTDALPVNLLGMN 329

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G +  +  T NPF +M E I L  + NFFE RV++YQ+   
Sbjct: 330 CSLMCQYVEFVADRLLLSLGCKKHYNAT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 387

Query: 122 L 122
           +
Sbjct: 388 M 388


>gi|297818266|ref|XP_002877016.1| hypothetical protein ARALYDRAFT_484491 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322854|gb|EFH53275.1| hypothetical protein ARALYDRAFT_484491 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 329

 Score =  154 bits (389), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +    L TK  +++ ++++ +A  +E  +  + +P   VG+N
Sbjct: 198 RDEGLHCDFAC-------LLYTLLKTKLSEERVKSIVCDAVEIEREFVCDALPCALVGMN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G   ++  T NPF WM E+I L+ + NFFE RV +YQ+ + 
Sbjct: 251 RDLMSQYIEFVADRLLGALGYGKVYGVT-NPFDWM-ELISLQGKTNFFEKRVGDYQKASV 308

Query: 122 LK 123
           + 
Sbjct: 309 MS 310


>gi|296536499|ref|ZP_06898590.1| ribonucleotide-diphosphate reductase subunit beta [Roseomonas
           cervicalis ATCC 49957]
 gi|296263178|gb|EFH09712.1| ribonucleotide-diphosphate reductase subunit beta [Roseomonas
           cervicalis ATCC 49957]
          Length = 343

 Score =  154 bits (389), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
           +RDE+LH    I +      ENP +WT++ +     +       E A+        G  G
Sbjct: 198 VRDETLHCLSVIRLFRTFIQENPEIWTEQLKADLVEICTTIVEHEDAFIDLAFELGGVQG 257

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     +QY++FIA+RR  Q+GLEP +   +NP PW+ E+++  +  NFFE R TEY + 
Sbjct: 258 MEPEDVKQYIRFIADRRLQQLGLEPHYGTEKNPLPWLDEILNAVEHMNFFEGRATEYSKA 317

Query: 120 A-ELKWD 125
           +    W+
Sbjct: 318 STAGTWE 324


>gi|294659365|ref|XP_461732.2| DEHA2G04268p [Debaryomyces hansenii CBS767]
 gi|199433907|emb|CAG90185.2| DEHA2G04268p [Debaryomyces hansenii]
          Length = 426

 Score =  154 bits (389), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +        ++ EA  +E  +  + +P   +G+N
Sbjct: 297 RDEGLHTDFACLLFS-------HLQNRPDAVIVERIITEAVTIEKEFFVDALPISLLGMN 349

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G + ++  T NPF +M E I L  + NFFE RV++YQ+   
Sbjct: 350 CNLMCQYVEFVADRLLVALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 407

Query: 122 L 122
           +
Sbjct: 408 M 408


>gi|171913278|ref|ZP_02928748.1| ribonucleotide-diphosphate reductase subunit beta [Verrucomicrobium
           spinosum DSM 4136]
          Length = 361

 Score =  154 bits (389), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 48/122 (39%), Positives = 74/122 (60%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES H+    ++   +  ENP +WT EF+++   ++ EA  LE  +  + +P   VGL
Sbjct: 232 LRDESNHIKVFRNLFMDLIDENPEIWTPEFREELVELMKEAVALEKEFIRDCLPVAAVGL 291

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A   E Y+ FIA+RR   +GL  L     NP PW++E+ D++KE+NFFE  VT+YQ+ +
Sbjct: 292 TAGEFELYIDFIADRRLASVGLPALTPGIVNPLPWLAEMQDIRKEQNFFEGTVTDYQKAS 351

Query: 121 EL 122
            L
Sbjct: 352 SL 353


>gi|148912897|ref|YP_001293211.1| hypothetical protein GTPV_gp017 [Goatpox virus Pellor]
          Length = 321

 Score =  154 bits (389), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K               + +++EA  +E  +    +P   +G+N
Sbjct: 196 RDEGLHCDFACLIFKHLKY-------PPSNDIIKIIINEAVSIEKEFLTNIIPVKLIGMN 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++FIA+R   ++G + +F  + NPF +M E I L+ + NFFE RV+EYQ+   
Sbjct: 249 CDLMSQYIEFIADRLLLELGCDKVF-MSTNPFDFM-ENISLEGKTNFFEKRVSEYQKMGV 306

Query: 122 LK 123
           + 
Sbjct: 307 IS 308


>gi|225320685|dbj|BAH29738.1| ribonucleoside-diphosphate reductase subunit M2 [Dicyema japonicum]
          Length = 337

 Score =  153 bits (388), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K + P       + +   ++ EA +LE  +  E +P   +G+N
Sbjct: 209 RDEGLHTDFACLLYHHLKKKLP-------RDRILQIITEAVVLEKEFLTEALPVALIGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R   ++G +  + Y +NPF +M E I L  + NFFE RV EYQ+   
Sbjct: 262 VNLMSQYIEFVADRLIIELGYDKHY-YAQNPFDFM-ENISLSGKTNFFEKRVGEYQRMGV 319

Query: 122 L 122
           +
Sbjct: 320 M 320


>gi|312075738|ref|XP_003140550.1| ribonucleotide reductase M2 B [Loa loa]
 gi|307764288|gb|EFO23522.1| ribonucleotide reductase M2 B [Loa loa]
          Length = 350

 Score =  153 bits (388), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   IK        K  +++   ++ EA  +E  Y  E +P   +G+N
Sbjct: 225 RDEGLHRDFACLLYTYIK-------NKPSEERIYQIIREAVDIEKEYLTEALPVDLIGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++++A+    ++    ++ Y++NPF +M E I ++ + NFFE RV+EYQ+   
Sbjct: 278 CKLMCQYIEYVADHLLTELHCAKMY-YSDNPFDFM-ERISIEAKTNFFEKRVSEYQKAGV 335

Query: 122 L 122
           L
Sbjct: 336 L 336


>gi|321263777|ref|XP_003196606.1| ribonucleoside-diphosphate reductase [Cryptococcus gattii WM276]
 gi|317463083|gb|ADV24819.1| Ribonucleoside-diphosphate reductase, putative [Cryptococcus gattii
           WM276]
          Length = 401

 Score =  153 bits (388), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 9/120 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   ++   PH  T         ++ EA  +E  +  + +P   +G+N
Sbjct: 269 RDEGLHTDFACLLFTHLR-RRPHPDT------IARIIKEAVSIEQEFLTDALPVSLIGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G E ++  + NPF +M E+I L+ + NFFE+RV+ Y +   
Sbjct: 322 AKLMCQYIEFVADRLLVALGNEKIWN-STNPFDFM-EMISLQGKANFFESRVSAYSKSGV 379


>gi|324509007|gb|ADY43795.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum]
          Length = 337

 Score =  153 bits (388), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   IK        K  Q++   ++ EA  LE  Y  E +P   +G+N
Sbjct: 212 RDEGLHRDFACLLYKYIKH-------KPSQEQVYEIIKEAVSLEQEYLTEALPVDLIGMN 264

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++++A+    ++G   ++    NPF +M E + ++ + NFFE RV+EYQ+   
Sbjct: 265 CRLMSQYIEYVADHLLTELGYPKVYN-ASNPFDFM-ENLSIEAKTNFFERRVSEYQRAGV 322

Query: 122 LK 123
           L 
Sbjct: 323 LS 324


>gi|211956300|ref|YP_002302368.1| ribonucleotide reductase small subunit [Deerpox virus W-1170-84]
 gi|115503095|gb|ABI99013.1| ribonucleotide reductase small subunit [Deerpox virus W-1170-84]
          Length = 321

 Score =  153 bits (388), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  Q+              +   ++ EA  +E ++    +P   +G+N
Sbjct: 196 RDEGLHCDFACLMFKQLLH-------PPNPSRIINIIVEAVSIEKSFLTTALPVKLIGMN 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R   ++G   +FK +ENPF +M E I L+ + NFFE RV++YQ+   
Sbjct: 249 CELMCQYIEFVADRLLSELGCTKIFK-SENPFDFM-ESISLEGKTNFFEKRVSDYQKMGI 306

Query: 122 LK 123
           + 
Sbjct: 307 MS 308


>gi|15896521|ref|NP_349870.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           acetobutylicum ATCC 824]
 gi|15026352|gb|AAK81210.1|AE007823_4 Ribonucleotide reductase beta subunit [Clostridium acetobutylicum
           ATCC 824]
 gi|325510679|gb|ADZ22315.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           acetobutylicum EA 2018]
          Length = 344

 Score =  153 bits (388), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 38/126 (30%), Positives = 68/126 (53%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ E P ++T+E +++ + M+      EI + H  +     G+N
Sbjct: 218 RDENTHLWLFRNIIKELQKEEPDMFTEEIKKELKDMVKTGVENEITWGHYVIGDNIQGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
               E Y++++ NRR   IG EP+++ Y ENP  W+    D    + +FFE + T Y + 
Sbjct: 278 KKLIEDYIKYLGNRRLEAIGFEPIYEGYDENPALWVDIYADANSVKTDFFEAKSTAYAKA 337

Query: 120 AELKWD 125
           + L  D
Sbjct: 338 STLVDD 343


>gi|290995765|ref|XP_002680453.1| predicted protein [Naegleria gruberi]
 gi|284094074|gb|EFC47709.1| predicted protein [Naegleria gruberi]
          Length = 338

 Score =  153 bits (387), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 69/122 (56%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K      +TK  QQ   ++++EA  +E  +  E++P   +G+N
Sbjct: 212 RDEGLHTDFACLLYSTLK------YTKLPQQVVHSLVYEAVEIEKEFISESLPVDLIGMN 265

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +   +QY++ +A+R    IG E ++  + NPF WM+ +I +  + NFFE +V EY +   
Sbjct: 266 SRLMQQYIEMVADRLLVSIGYEKIYN-SSNPFDWMN-IISVSGKTNFFEKKVGEYAKANI 323

Query: 122 LK 123
           + 
Sbjct: 324 MS 325


>gi|156847978|ref|XP_001646872.1| hypothetical protein Kpol_2002p85 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117553|gb|EDO19014.1| hypothetical protein Kpol_2002p85 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 400

 Score =  153 bits (387), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + IK        K        ++ EA  +E  Y  + +P   +G+N
Sbjct: 270 RDEGLHTDFACLLFSHIK-------NKPDPAIVEKIVTEAVEIEKRYFTDALPVALLGMN 322

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R     G E +FK  ENPF +M E I L  + NFFE RV++YQ+ + 
Sbjct: 323 ADLMNQYVEFVADRLLVAFGNEKVFK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKASV 380

Query: 122 L 122
           +
Sbjct: 381 I 381


>gi|45268714|dbj|BAD12266.1| p53-inducible ribonucleotide reductase small subunit 2 short form
           gamma [Homo sapiens]
          Length = 139

 Score =  153 bits (387), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 40/120 (33%), Positives = 68/120 (56%), Gaps = 9/120 (7%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N 
Sbjct: 15  DEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMNC 67

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122
              +QY++F+A+R   ++G   +F   ENPF +M E I L+ + NFFE RV+EYQ+ A +
Sbjct: 68  ILMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAVM 125


>gi|323453718|gb|EGB09589.1| hypothetical protein AURANDRAFT_60022 [Aureococcus anophagefferens]
          Length = 393

 Score =  153 bits (387), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 7/120 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +++         +    ++  ++ EA   E+ +  + +P   VG+N
Sbjct: 265 RDEGLHCDFACALYSRLPGHL-----RLSDAEATAIISEAVDTEVDFVTDALPVSLVGMN 319

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A     Y++F+A+R    +G   ++    NPF +M E+I ++ + NFFE RV EYQ+   
Sbjct: 320 AKLMTDYVKFVADRLLASLGHPKIYGAA-NPFDFM-ELISMQGKTNFFEKRVAEYQKANV 377


>gi|67585619|ref|XP_665115.1| ribonucleotide reductase R2 subunit [Cryptosporidium hominis TU502]
 gi|54655552|gb|EAL34885.1| ribonucleotide reductase R2 subunit [Cryptosporidium hominis]
          Length = 296

 Score =  153 bits (387), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K + P         + + ++ EA  +E  +  +++P   +G+N
Sbjct: 171 RDEGLHADFACLIYKALKFKLP-------APRVQQIISEAVEVERNFLCDSLPVDLIGMN 223

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    + +  ++  + NPF WM  +I L+ + NFFE RV EYQ    
Sbjct: 224 SRLMAQYIEFVADRLLFALDIPKIYNVS-NPFDWMD-LISLQGKTNFFEKRVGEYQMAGV 281

Query: 122 L 122
           +
Sbjct: 282 M 282


>gi|21492474|ref|NP_659593.1| Ribonucleotide reductase, small subunit [Sheeppox virus]
          Length = 321

 Score =  153 bits (387), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K            +    ++ EA  +E  +    +P   +G+N
Sbjct: 196 RDEGLHCDFACLIFKHLKY-------PPSNEIITIIIKEAVSIEKEFLTNIIPVKLIGMN 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++FIA+R   ++G + +F  + NPF +M E I L+ + NFFE RV+EYQ+   
Sbjct: 249 CDLMSQYIEFIADRLLLELGCDKVF-MSINPFDFM-ENISLEGKTNFFEKRVSEYQKMGV 306

Query: 122 LK 123
           + 
Sbjct: 307 IS 308


>gi|190896520|gb|ACE96773.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|58260896|ref|XP_567858.1| ribonucleoside-diphosphate reductase [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134116993|ref|XP_772723.1| hypothetical protein CNBK0970 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255341|gb|EAL18076.1| hypothetical protein CNBK0970 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229939|gb|AAW46341.1| ribonucleoside-diphosphate reductase, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 401

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 9/120 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   ++   PH  T         ++ EA  +E  +  + +P   +G+N
Sbjct: 269 RDEGLHTDFACLLFTHLR-RRPHPDT------IARIIKEAVTIEQEFLTDALPVSLIGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G E ++  + NPF +M E+I L+ + NFFE+RV+ Y +   
Sbjct: 322 AKLMCQYIEFVADRLLVAMGNEKIWN-STNPFDFM-EMISLQGKANFFESRVSAYSKSGV 379


>gi|321263951|ref|XP_003196693.1| ribonucleotide reductase small subunit [Cryptococcus gattii WM276]
 gi|317463170|gb|ADV24906.1| Ribonucleotide reductase small subunit, putative [Cryptococcus
           gattii WM276]
          Length = 430

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 9/120 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + N +K       T E       ++ EA ++E  +  + +P   +G+N
Sbjct: 294 RDEGMHTDFACLLYNHLKHR---CSTDE----VHRIVSEALVIEKQFLTDALPCALIGIN 346

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QYM+F+A+R    +G   ++  T NPF WM E+I L+ + NFFE+RV+ YQ+   
Sbjct: 347 AHLMCQYMEFVADRLVVDLGYPKIYNAT-NPFDWM-ELISLQGKANFFESRVSAYQKANV 404


>gi|297209|emb|CAA48969.1| C8L [Variola virus]
 gi|745144|prf||2015436AF C8L gene
          Length = 333

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 209 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + YM+F+A+R   ++G + ++  T NP  +M E I L+ + NFFE RV EYQ+   
Sbjct: 262 CEMMKTYMEFVADRLISELGFKRIYNVT-NPSDFM-ENISLEGKTNFFEKRVGEYQKMGV 319

Query: 122 LK 123
           + 
Sbjct: 320 MS 321


>gi|190896508|gb|ACE96767.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896514|gb|ACE96770.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896522|gb|ACE96774.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896540|gb|ACE96783.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896542|gb|ACE96784.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|190896510|gb|ACE96768.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896556|gb|ACE96791.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896562|gb|ACE96794.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|190896546|gb|ACE96786.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|302678465|ref|XP_003028915.1| hypothetical protein SCHCODRAFT_83117 [Schizophyllum commune H4-8]
 gi|300102604|gb|EFI94012.1| hypothetical protein SCHCODRAFT_83117 [Schizophyllum commune H4-8]
          Length = 331

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 9/120 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   +   ++   PH          R ++ EA  +E  +  + +P   +G+N
Sbjct: 202 RDEGMHTDFACLLFAHLR-RRPH------PDVVRRIIMEAVTIEQEFLTDALPVSLIGMN 254

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G E ++  T NPF +M  +I L+ + NFFE RV++Y+  A 
Sbjct: 255 STLMCQYIEFVADRLLVALGNEKVYNVT-NPFDFMD-MISLQGKTNFFEKRVSDYKMAAV 312


>gi|297157411|gb|ADI07123.1| ribonucleoside-diphosphate reductase [Streptomyces bingchenggensis
           BCW-1]
          Length = 340

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 43/126 (34%), Positives = 76/126 (60%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF   V++ ++ E P L+  E QQ+   ML EA   E+ +A +   +G  G+N
Sbjct: 214 RDETMHMNFAFQVVDTVREEEPELFDDELQQQVTDMLREAVEAELQFARDLCGEGLPGMN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
             S  QY++ +A++R  ++G  P++  +ENPF +M E+ ++++  NFFE R + YQ    
Sbjct: 274 TESMRQYLECVADQRLARLGFAPVY-GSENPFSFM-ELQNVQELTNFFERRASAYQVAVE 331

Query: 120 AELKWD 125
             + +D
Sbjct: 332 GSVSFD 337


>gi|306478720|ref|NP_042072.2| Ribonucleoside-diphosphate reductase small chain [Variola virus]
 gi|464615|sp|P33799|RIR2_VAR67 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 319

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + YM+F+A+R   ++G + ++  T NP  +M E I L+ + NFFE RV EYQ+   
Sbjct: 248 CEMMKTYMEFVADRLISELGFKRIYNVT-NPSDFM-ENISLEGKTNFFEKRVGEYQKMGV 305

Query: 122 LK 123
           + 
Sbjct: 306 MS 307


>gi|284039889|ref|YP_003389819.1| ribonucleoside-diphosphate reductase [Spirosoma linguale DSM 74]
 gi|283819182|gb|ADB41020.1| Ribonucleoside-diphosphate reductase [Spirosoma linguale DSM 74]
          Length = 349

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  K  + +   ++  A  +E  +  + +P   +G+N
Sbjct: 200 RDEGLHRDFACMLY------TDHIVNKLPESQIYDIIRNAVEIEQEFVADALPVSLIGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A   +QY+ F+A+     +GL  ++    NPF +M  +I L+ + NFFE RV EYQ+G  
Sbjct: 254 AELMKQYIAFVADHLLVTLGLRKMYNVA-NPFDFMD-MISLQGKTNFFEKRVGEYQRGEV 311

Query: 122 LK 123
           + 
Sbjct: 312 MS 313


>gi|544843|gb|AAB29634.1| C8L product [variola virus VAR, India-1967, Peptide, 333 aa]
          Length = 333

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 209 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + YM+F+A+R   ++G + ++  T NP  +M E I L+ + NFFE RV EYQ+   
Sbjct: 262 CEMMKTYMEFVADRLISELGFKRIYNVT-NPSDFM-ENISLEGKTNFFEKRVGEYQKMGV 319

Query: 122 LK 123
           + 
Sbjct: 320 MS 321


>gi|94986920|ref|YP_594853.1| ribonucleotide reductase, beta subunit [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731169|emb|CAJ54531.1| Ribonucleotide reductase, beta subunit [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 333

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 54/125 (43%), Positives = 69/125 (55%), Gaps = 3/125 (2%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE LH  FGI VI  +  E             R +  E    EIAYA+  + +  +G 
Sbjct: 212 LRDEVLHCTFGITVIKGLIEEENITLDP---TAVRQLWDEVEAAEIAYANYILHEPIIGY 268

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA       +FIANRR  Q+G++  F   +N  PW+ E  +L+KEKNFFETRVTEYQ G 
Sbjct: 269 NADLHIGQFRFIANRRSRQLGMKEPFPGAKNVLPWLDEQSNLRKEKNFFETRVTEYQTGG 328

Query: 121 ELKWD 125
            LKWD
Sbjct: 329 GLKWD 333


>gi|296116311|ref|ZP_06834927.1| ribonucleotide-diphosphate reductase subunit beta
           [Gluconacetobacter hansenii ATCC 23769]
 gi|295977130|gb|EFG83892.1| ribonucleotide-diphosphate reductase subunit beta
           [Gluconacetobacter hansenii ATCC 23769]
          Length = 334

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 1/122 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH      +      ENP +WT++ Q   R +  +    E A+   +   G   G
Sbjct: 204 VRDETLHCVSMARLFRVFVQENPEIWTQKLQDDIRQICRDIVEHEDAFIDLSFEMGPVEG 263

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L+A   ++Y++F+ANRR  Q+GL+ L+    NP PW+ E+++  +  NFFE R TEY + 
Sbjct: 264 LDAAQVKRYIRFVANRRLGQLGLDGLYDVATNPLPWVDEMVNAVEHANFFENRSTEYSRA 323

Query: 120 AE 121
           A 
Sbjct: 324 AT 325


>gi|58260834|ref|XP_567827.1| ribonucleotide reductase small subunit [Cryptococcus neoformans
           var. neoformans JEC21]
 gi|134117207|ref|XP_772830.1| hypothetical protein CNBK2010 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255448|gb|EAL18183.1| hypothetical protein CNBK2010 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229908|gb|AAW46310.1| ribonucleotide reductase small subunit, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 430

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 9/120 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + N +K       T E       ++ EA ++E  +  + +P   +G+N
Sbjct: 294 RDEGMHTDFACLLYNHLKHR---CSTDE----VHHIVSEALVIEKQFLTDALPCALIGIN 346

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QYM+F+A+R    +G   ++  T NPF WM E+I L+ + NFFE+RV+ YQ+   
Sbjct: 347 AHLMCQYMEFVADRLVVDLGYPKIYNAT-NPFDWM-ELISLQGKANFFESRVSAYQKANV 404


>gi|190570498|ref|YP_001974856.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Culex quinquefasciatus Pel]
 gi|213019257|ref|ZP_03335064.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Culex quinquefasciatus JHB]
 gi|190356770|emb|CAQ54129.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Culex quinquefasciatus Pel]
 gi|212995366|gb|EEB56007.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Culex quinquefasciatus JHB]
          Length = 329

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 44/126 (34%), Positives = 70/126 (55%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60
           RDE+LH N  I++ N    EN  +W  EF+++  +       LE  +       G   GL
Sbjct: 193 RDETLHTNSIINLFNTFIKENNEIWNDEFKEELYSACRTIVELEDEFISLAFDLGDVEGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A     Y+++IANRR  Q+GL+ ++   +NP PW+ E+++  +  NFFE RVTEY + A
Sbjct: 253 SAEEVRNYIRYIANRRLTQLGLKSIYNVKDNPIPWLDEILNGVEHTNFFENRVTEYSRAA 312

Query: 121 -ELKWD 125
            +  W+
Sbjct: 313 TQGTWE 318


>gi|209877302|ref|XP_002140093.1| ribonucleotide-diphosphate reductase, small subunit
           [Cryptosporidium muris RN66]
 gi|209555699|gb|EEA05744.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Cryptosporidium muris RN66]
          Length = 346

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +FG  +   +    P+        + + ++ EA  +E A+  +++P   +G+N
Sbjct: 221 RDEGIHADFGCLLYKTLNNRLPYG-------RVQEIIAEAVEVERAFLCDSLPVDLIGMN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    + +  ++  T NPF WM  +I L+ + NFFE RV EYQ    
Sbjct: 274 SRLMAQYIEFVADRLLFALDVPKIYNVT-NPFDWMD-LISLQGKTNFFEKRVAEYQMAGV 331

Query: 122 L 122
           +
Sbjct: 332 M 332


>gi|190896516|gb|ACE96771.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|332031690|gb|EGI71130.1| Ribonucleoside-diphosphate reductase subunit M2 [Acromyrmex
           echinatior]
          Length = 210

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 33/124 (26%), Positives = 65/124 (52%), Gaps = 9/124 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  K   ++ ++++ +A  +E  +  + +P   +G+N
Sbjct: 81  RDEGLHCDFACLMFK-------HIVQKPSFERVKSIVMDAVEIEKEFLTQALPVELIGMN 133

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                 Y++F+A+R    +G E ++  +ENPF +M   I +  + NFFE +V EY++   
Sbjct: 134 RTFMCNYIEFVADRLFVALGFEKVYN-SENPFSFMD-FISMMGKTNFFEKKVGEYKKFGV 191

Query: 122 LKWD 125
           ++ D
Sbjct: 192 MEED 195


>gi|190896564|gb|ACE96795.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|146298285|ref|YP_001192876.1| ribonucleoside-diphosphate reductase [Flavobacterium johnsoniae
           UW101]
 gi|146152703|gb|ABQ03557.1| Ribonucleoside-diphosphate reductase [Flavobacterium johnsoniae
           UW101]
          Length = 325

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 39/124 (31%), Positives = 70/124 (56%), Gaps = 8/124 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F + + N       HL  K  +++ + ++ +A  +E  +  E++P   +G+N
Sbjct: 198 RDEGVHCDFAVHLHNH------HLVNKVPKERIKEIIVDALDIERQFVTESLPVSLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R   ++G E ++    NPF +M  +I L+ + NFFE RV EYQ+   
Sbjct: 252 AGLMTQYLEFVADRLLVELGCERVYGSA-NPFDFMD-MISLQGKTNFFEKRVAEYQKSGV 309

Query: 122 LKWD 125
           +  D
Sbjct: 310 MNTD 313


>gi|190896552|gb|ACE96789.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|13876672|gb|AAK43560.1| ribonucleoside reductase [lumpy skin disease virus]
          Length = 321

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K                 +++EA  +E  +    +P   +G+N
Sbjct: 196 RDEGLHCDFACLIFKHLKY-------PPSNDIITIIINEAVSIEKEFLTNIIPVKLIGMN 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++FIA+R   ++G + +F  + NPF +M E I L+ + NFFE RV+EYQ+   
Sbjct: 249 CVLMSQYIEFIADRLLLELGCDKVF-MSTNPFDFM-ENISLEGKTNFFEKRVSEYQKMGV 306

Query: 122 LK 123
           + 
Sbjct: 307 IS 308


>gi|62637405|ref|YP_227403.1| Ribonucleotide reductase small subunit [Deerpox virus W-848-83]
 gi|115503265|gb|ABI99183.1| ribonucleotide reductase small subunit [Deerpox virus W-848-83]
          Length = 321

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  Q+              +   ++ EA  +E ++  + +P   +G+N
Sbjct: 196 RDEGLHCDFACLMFKQLLY-------PPSTSRIINIIVEAVSIEKSFLTKALPVKLIGMN 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R   ++G   +FK +ENPF +M E I L+ + NFFE RV++YQ+   
Sbjct: 249 CELMCQYIEFVADRLLSELGCNKIFK-SENPFDFM-ESISLEGKTNFFEKRVSDYQKMGI 306

Query: 122 LK 123
           + 
Sbjct: 307 MS 308


>gi|22595713|gb|AAN02745.1| ribonucleotide reductase small subunit [lumpy skin disease virus]
          Length = 321

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K                 +++EA  +E  +    +P   +G+N
Sbjct: 196 RDEGLHCDFACLIFKHLKY-------PPSNDIITIIINEAVSIEKEFLTNIIPVKLIGMN 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++FIA+R   ++G + +F  + NPF +M E I L+ + NFFE RV+EYQ+   
Sbjct: 249 CVLMSQYIEFIADRLLLELGCDKVF-MSTNPFDFM-ENISLEGKTNFFEKRVSEYQKMGV 306

Query: 122 LK 123
           + 
Sbjct: 307 IS 308


>gi|266623614|ref|ZP_06116549.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           hathewayi DSM 13479]
 gi|288864591|gb|EFC96889.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           hathewayi DSM 13479]
          Length = 346

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T +     R M+ E    EIA+ H  +     GL 
Sbjct: 219 RDENTHLWLFRNMILELKNEEPELFTPDRVDVYREMIKEGCRQEIAWGHYAIGDKVPGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y+Q++ N RC  +G EP+++  E       W+S+  +    + +FFE R T Y 
Sbjct: 279 KDMITDYIQYLGNLRCMSLGFEPIYEGHEKEPESMAWVSQYSNANMIKTDFFEARSTAYA 338

Query: 118 QGAELKWD 125
           + + L  D
Sbjct: 339 KSSALVDD 346


>gi|257456224|ref|ZP_05621421.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           vincentii ATCC 35580]
 gi|257446310|gb|EEV21356.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           vincentii ATCC 35580]
          Length = 351

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I++++ E P L+T E  +  R+M+ E    EIA+ H  +     GL 
Sbjct: 223 RDENTHLWLFRSIIHELQKEEPQLFTPENNELFRSMIREGCEQEIAWGHYVIGDDIPGLT 282

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y+Q++ N RC  +G EPL++ + E P    W+S+  +    + +FFE + T Y 
Sbjct: 283 RGMVTDYIQYLGNLRCENLGFEPLYEGHREEPASMSWVSQYSNANLIKTDFFEAKSTAYA 342

Query: 118 QGAELKWD 125
           + + LK D
Sbjct: 343 KSSALKDD 350


>gi|195027582|ref|XP_001986661.1| GH20400 [Drosophila grimshawi]
 gi|193902661|gb|EDW01528.1| GH20400 [Drosophila grimshawi]
          Length = 393

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +         HL  +  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHCDFAVMMFQ-------HLVQRPSRERIIEIVSDAVTIEQEFLTDALPVNLIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                +Y++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFFE +V EYQ+   
Sbjct: 321 CALMSEYIEFVADRLLVELGVGKIYN-TKNPFTFM-EMISLDGKTNFFEKKVGEYQRMGV 378

Query: 122 LK 123
             
Sbjct: 379 TS 380


>gi|302682638|ref|XP_003031000.1| hypothetical protein SCHCODRAFT_57055 [Schizophyllum commune H4-8]
 gi|300104692|gb|EFI96097.1| hypothetical protein SCHCODRAFT_57055 [Schizophyllum commune H4-8]
          Length = 362

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 9/120 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   ++  ++   PH       +    ++ EA  +E  +  + +P   +G+N
Sbjct: 238 RDEGMHTDFACLLLTHMR-RRPH------PEVIEMIIKEAVAIEKEFLTDALPVSLIGMN 290

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G + ++  T NPF +M  +I L+ + NFFE RV++Y+  A 
Sbjct: 291 ADLMCQYIEFVADRLLVALGNDKVWNAT-NPFDFMD-MISLQGKTNFFEKRVSDYKIAAV 348


>gi|187607401|ref|NP_001119973.1| ribonucleotide reductase M2 B (TP53 inducible) [Xenopus (Silurana)
           tropicalis]
 gi|165971068|gb|AAI58191.1| LOC100144925 protein [Xenopus (Silurana) tropicalis]
          Length = 346

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +         K  +++   ++  A  +E  +  E +P   +G+N
Sbjct: 221 RDEGLHTDFACLMFHYLVK-------KPTEERVTEIIVNAVRIEQEFLTEALPVSLIGMN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + Y++F+A+R   ++G    FK  ENPF +M E I L+ + NFFE RV+EYQ+ A 
Sbjct: 274 CTLMKTYIEFVADRLLVELGCSKAFK-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 331

Query: 122 L 122
           +
Sbjct: 332 M 332


>gi|70936723|ref|XP_739266.1| ribonucleotide reductase small subunit [Plasmodium chabaudi
           chabaudi]
 gi|56516136|emb|CAH80811.1| ribonucleotide reductase small subunit, putative [Plasmodium
           chabaudi chabaudi]
          Length = 349

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 69/121 (57%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P        +  + ++ EA  +E ++  E++P   +G+N
Sbjct: 224 RDEGLHTDFNCLIYSLLENKLPE-------EVVQNIVKEAVEVERSFICESLPCDLIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G   +F +++NPF WM  +I L+ + NFFE RV +YQ+   
Sbjct: 277 SRLMSQYIEFVADRLLECLGCSKVF-HSKNPFSWMD-LISLQGKTNFFEKRVADYQKSGV 334

Query: 122 L 122
           +
Sbjct: 335 M 335


>gi|299747484|ref|XP_001837064.2| ribonucleotide reductase small subunit [Coprinopsis cinerea
           okayama7#130]
 gi|298407540|gb|EAU84681.2| ribonucleotide reductase small subunit [Coprinopsis cinerea
           okayama7#130]
          Length = 379

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 64/120 (53%), Gaps = 9/120 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   +   ++   PH  T         ++ EA  +E  +  + +P   +G+N
Sbjct: 249 RDEGMHTDFACLLFAYLRK-RPHSDT------ILAIVTEAVEIEKEFFSDALPVSLIGMN 301

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G +  + + +NPF +M E+I ++ + NFFE RV++Y +   
Sbjct: 302 SSLMNQYIEFVADRLLTSLGNDKHY-HVDNPFDFM-ELISMEGKANFFEKRVSDYAKANV 359


>gi|190896532|gb|ACE96779.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896554|gb|ACE96790.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|88861512|ref|ZP_01136127.1| ribonucleotide-diphosphate reductase beta subunit
           [Pseudoalteromonas tunicata D2]
 gi|88816487|gb|EAR26327.1| ribonucleotide-diphosphate reductase beta subunit
           [Pseudoalteromonas tunicata D2]
          Length = 219

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 1/122 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH N  I +  +   ENP +WT   +++           E A+       G   G
Sbjct: 89  VRDETLHCNSMIRIFKEFIKENPEIWTPTLKKELYEACRIIVEHEDAFIDLAFEMGPMEG 148

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A   + Y++FIANRR  Q+GLEP++   +NP  W+  +++  +  NFFE R TEY + 
Sbjct: 149 LTAQEVKDYIRFIANRRLIQLGLEPIYDVQKNPLTWLDTMLNAVEHMNFFEGRATEYSKA 208

Query: 120 AE 121
           + 
Sbjct: 209 ST 210


>gi|190896550|gb|ACE96788.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|190896538|gb|ACE96782.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896548|gb|ACE96787.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896558|gb|ACE96792.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|19113338|ref|NP_596546.1| ribonucleotide reductase small subunit Suc22 [Schizosaccharomyces
           pombe 972h-]
 gi|9297110|sp|P36603|RIR2_SCHPO RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|3378511|emb|CAA20100.1| ribonucleotide reductase small subunit Suc22 [Schizosaccharomyces
           pombe]
          Length = 391

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K        +  ++    ++ EA  +E  Y  + +P   +G+N
Sbjct: 261 RDEGLHTDFACLMFSHLKH-------RPGRKVVEAIIVEAVDIEKEYFTDALPVSLLGMN 313

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G +  +  T NPF +M E I L  + NFFE +V++YQ    
Sbjct: 314 KDLMCQYIEFVADRLLVALGNDKYYNVT-NPFDFM-ENISLAGKTNFFEKKVSDYQIAGV 371

Query: 122 LK 123
           + 
Sbjct: 372 MS 373


>gi|291276761|ref|YP_003516533.1| ribonucleoside-diphosphate reductase subunit beta [Helicobacter
           mustelae 12198]
 gi|290963955|emb|CBG39794.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter
           mustelae 12198]
          Length = 344

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I  +K E P L+ K+ +++   M   A  +E A+         +GL 
Sbjct: 221 RDEVTHLILFQNMIRTLKKERPDLFDKDLEEEIVEMFRRAVEIEAAWGEYITQGQILGLT 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
                QY+Q++A++R  ++G+  L+   E+P  W+ +     ++  NFFE +VT Y +G+
Sbjct: 281 GEVIHQYIQYLADQRLSKVGMPKLYN-VEHPIKWVEQYASFNEQRTNFFEAKVTNYAKGS 339

Query: 121 ELKW 124
            +  
Sbjct: 340 LIDD 343


>gi|156102402|ref|XP_001616894.1| ribonucleoside-diphosphate reductase small chain [Plasmodium vivax
           SaI-1]
 gi|148805768|gb|EDL47167.1| ribonucleoside-diphosphate reductase small chain, putative
           [Plasmodium vivax]
          Length = 349

 Score =  151 bits (383), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 68/121 (56%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P        +  + ++ EA  +E ++  E++P   +G+N
Sbjct: 224 RDEGLHTDFNCLIYSLLENKLPE-------EVVQNIVKEAVEVERSFICESLPCDLIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G   +F + +NPF WM  +I L+ + NFFE RV +YQ+   
Sbjct: 277 SRLMSQYIEFVADRLLECLGSPKIF-HAKNPFNWMD-LISLQGKTNFFEKRVADYQKSGV 334

Query: 122 L 122
           +
Sbjct: 335 M 335


>gi|190896518|gb|ACE96772.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  151 bits (383), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++ Y  NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVY-YVANPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|32266105|ref|NP_860137.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           hepaticus ATCC 51449]
 gi|32262154|gb|AAP77203.1| ribonucleoside diphosphate reductase [Helicobacter hepaticus ATCC
           51449]
          Length = 349

 Score =  151 bits (383), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 65/125 (52%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I+ ++ E  HL+T   +++   M  +A  +E  +         +GL 
Sbjct: 225 RDEVTHLLLFQNMISSLRKEQGHLFTPSLEEEVVEMFKKAVEIESQWGEYITQGQILGLT 284

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120
           +    +Y+Q++A+ R   +GL  L+  ++NP  W+ +       + NFFE +VT Y +G+
Sbjct: 285 SEIIREYIQYLADARLKAVGLPQLY-GSKNPIKWVDQFASFNDQKTNFFEAKVTNYSKGS 343

Query: 121 ELKWD 125
            + +D
Sbjct: 344 -INFD 347


>gi|163753569|ref|ZP_02160692.1| ribonucleoside-diphosphate reductase 1, beta subunit [Kordia
           algicida OT-1]
 gi|161325783|gb|EDP97109.1| ribonucleoside-diphosphate reductase 1, beta subunit [Kordia
           algicida OT-1]
          Length = 326

 Score =  151 bits (383), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F + +       N HL  K  +++ R ++ +A  +E  +  E++P   +G+N
Sbjct: 199 RDEGVHCDFAVHL------HNNHLVNKVPKERIRAIIVDALNIEREFITESLPVSLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+ +R   ++G E  +  + NPF +M  +I L+ + NFFE RV+EYQ+   
Sbjct: 253 AKLMTQYLEFVTDRLLQELGCEKEYNVS-NPFDFMD-MISLQGKTNFFEKRVSEYQKAGV 310

Query: 122 LK 123
           L 
Sbjct: 311 LN 312


>gi|291562343|emb|CBL41159.1| Ribonucleotide reductase, beta subunit [butyrate-producing
           bacterium SS3/4]
          Length = 346

 Score =  151 bits (383), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ E P L+T    Q  R M+ E    EIA+ H  +     GLN
Sbjct: 218 RDENTHLWLFRNIITELQKEQPELFTAGSVQALREMMREGVEQEIAWGHYVIGDDIPGLN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y++++ N R   +G   L+   E       W+S+  D    + +FFE R T Y 
Sbjct: 278 RQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVKTDFFEARSTAYA 337

Query: 118 QGAELKWD 125
           +   L  D
Sbjct: 338 KSTALIDD 345


>gi|15826569|pdb|1JK0|A Chain A, Ribonucleotide Reductase Y2y4 Heterodimer
          Length = 419

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K        ++ EA  +E  Y  + +P   +G+N
Sbjct: 291 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 343

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R     G +  +K  ENPF +M E I L  + NFFE RV++YQ+   
Sbjct: 344 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 401

Query: 122 LK 123
           + 
Sbjct: 402 MS 403


>gi|328872436|gb|EGG20803.1| ribonucleotide reductase small subunit [Dictyostelium fasciculatum]
          Length = 335

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N+       L  K   +   +++ +A   E  +  +++P   +G+N
Sbjct: 201 RDEGLHCDFACLLYNK-------LNNKLDVKTIESIIRDAVECEKEFVTDSLPVDLIGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    +Y++F A+R    +G + ++    NPF WM E+I L ++ NFFE +V+EY +   
Sbjct: 254 SREMSKYIEFCADRLLVSLGYKKIYNSA-NPFDWM-EMISLMRKANFFEGKVSEYAKAGV 311

Query: 122 LK 123
            K
Sbjct: 312 AK 313


>gi|71024571|ref|XP_762515.1| hypothetical protein UM06368.1 [Ustilago maydis 521]
 gi|46101992|gb|EAK87225.1| hypothetical protein UM06368.1 [Ustilago maydis 521]
          Length = 424

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 9/124 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        +        ++ EA  +E A+  E++P   +G+N
Sbjct: 289 RDEGLHTDFACLLFSHLRR-------RAHPDTVLKIITEAVEIEKAFLCESIPVALIGMN 341

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++++A+R    +G  P+   +  PF +M+  I L+ + NFFE +V EY +   
Sbjct: 342 SKLMCQYIEYVADRLLVSLG-NPVHYGSTCPFDFMT-NISLEGKTNFFEKKVAEYAKAGV 399

Query: 122 LKWD 125
            + D
Sbjct: 400 ARKD 403


>gi|254456975|ref|ZP_05070403.1| ribonucleoside-diphosphate reductase, beta subunit
           [Campylobacterales bacterium GD 1]
 gi|207085767|gb|EDZ63051.1| ribonucleoside-diphosphate reductase, beta subunit
           [Campylobacterales bacterium GD 1]
          Length = 340

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 41/125 (32%), Positives = 64/125 (51%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+T + +++   M  EA  LE  +         +GL 
Sbjct: 215 RDEVTHLVLFQNLINTLRKERPDLFTDKLKEEVIAMFKEAVQLESEWGKYITQGQILGLT 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120
               EQY++F+A+ R   +G E L+  T NP  W+ +       + NFFE  VT Y +G+
Sbjct: 275 NDIVEQYIKFLADERLTAVGFEKLYNVT-NPIKWVDDFAKFNDQKTNFFEGTVTNYSKGS 333

Query: 121 ELKWD 125
            L +D
Sbjct: 334 -LTFD 337


>gi|313683656|ref|YP_004061394.1| ribonucleotide reductase [Sulfuricurvum kujiense DSM 16994]
 gi|313156516|gb|ADR35194.1| ribonucleotide reductase [Sulfuricurvum kujiense DSM 16994]
          Length = 339

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 40/125 (32%), Positives = 67/125 (53%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T+E  ++   M  +A  LE A+         +GL 
Sbjct: 215 RDEVTHLVLFQNIINTLRRERSDLFTEELIEEVYDMFRKAVELETAWGKYITQGQILGLT 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120
               EQY+Q++A++R   +GL+PL+  + +P  W+ +       + NFFE  VT Y +G+
Sbjct: 275 NEIVEQYIQYLADQRLTAVGLKPLYNVS-HPIKWVDDFSKFNDQKTNFFEGTVTNYSKGS 333

Query: 121 ELKWD 125
            L +D
Sbjct: 334 -LSFD 337


>gi|167760514|ref|ZP_02432641.1| hypothetical protein CLOSCI_02888 [Clostridium scindens ATCC 35704]
 gi|167661880|gb|EDS06010.1| hypothetical protein CLOSCI_02888 [Clostridium scindens ATCC 35704]
          Length = 347

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ ++K E P L+T+   ++ R M+ E    EI++ H  +     GLN
Sbjct: 219 RDENTHLWLFRNILLELKKEEPQLFTESRIEEYREMIKEGCQQEISWGHYVIGDDIQGLN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y+Q++ N RC  +G  P+++ + + P    W+S+  +    + +FFE R T Y 
Sbjct: 279 RDMVTDYIQYLGNLRCTNLGFAPIYEGHVKEPDSMSWVSQFSNANMIKTDFFEARSTAYA 338

Query: 118 QGAELKWD 125
           + + L  D
Sbjct: 339 KSSALVDD 346


>gi|68485781|ref|XP_713171.1| hypothetical protein CaO19.9424 [Candida albicans SC5314]
 gi|68485874|ref|XP_713125.1| hypothetical protein CaO19.1868 [Candida albicans SC5314]
 gi|46434604|gb|EAK94008.1| hypothetical protein CaO19.1868 [Candida albicans SC5314]
 gi|46434651|gb|EAK94054.1| hypothetical protein CaO19.9424 [Candida albicans SC5314]
 gi|238883648|gb|EEQ47286.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
           albicans WO-1]
          Length = 394

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H ++   + + +K        K   +    ++ EA  +E  Y  + +P   +G+N
Sbjct: 266 RDEGIHTDYACLLFSYLK-------NKPSSEIIEKIITEAVDIEKEYFSDALPVSLLGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R     G +  +  T NPF +M E I L  + NFFE RV++YQ+   
Sbjct: 319 CDLMCQYVEFVADRLLVAFGNKKYYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 376

Query: 122 LK 123
           ++
Sbjct: 377 ME 378


>gi|162147608|ref|YP_001602069.1| ribonucleotide-diphosphate reductase subunit beta
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209542240|ref|YP_002274469.1| ribonucleotide-diphosphate reductase subunit beta
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786185|emb|CAP55767.1| putative ribonucleotide reductase small subunit [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209529917|gb|ACI49854.1| Ribonucleoside-diphosphate reductase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 353

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH      +      ENP +WT   +     +  +    E A+       G   G
Sbjct: 213 VRDETLHCLSMARLFRVFIQENPEIWTDALRADIVQICRDIVEHEDAFIDLCFEMGPVEG 272

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L+    + Y++FIA+RR + +GL+ ++    NP PW+ ++++  +  NFFE R TEY + 
Sbjct: 273 LDGDLVKTYIRFIADRRLNLLGLDGIYDVPSNPLPWVDDMLNAVEHTNFFENRSTEYSRA 332

Query: 120 A-ELKWD 125
           +    W+
Sbjct: 333 STTGSWE 339


>gi|307719930|ref|YP_003891070.1| Ribonucleoside-diphosphate reductase [Sulfurimonas autotrophica DSM
           16294]
 gi|306978023|gb|ADN08058.1| Ribonucleoside-diphosphate reductase [Sulfurimonas autotrophica DSM
           16294]
          Length = 340

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+T E +     M  EA  LE  +         +GL 
Sbjct: 215 RDEVTHLVLFQNLINTLRKERPDLFTDELRADVIEMFKEAVKLETEWGKYITQGQILGLT 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120
               EQY+Q++A+ R + +G + L+  + NP  W+ +       + NFFE  VT Y +G+
Sbjct: 275 DEIVEQYIQYLADDRLNSVGFDKLYNVS-NPIKWVDDFAKFNDQKTNFFEGTVTNYSKGS 333

Query: 121 ELKWD 125
            L +D
Sbjct: 334 -LSFD 337


>gi|331086748|ref|ZP_08335825.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 9_1_43BFAA]
 gi|330409914|gb|EGG89349.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 9_1_43BFAA]
          Length = 347

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 68/128 (53%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ +++ E P L+++E +++ R M+ E    EIA+ H  +     GL+
Sbjct: 219 RDENTHLWLFTNILRELRKELPELFSEEKEKEYRQMIREGCEQEIAWGHYVIGDAVSGLS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y++++ N RC  +GL P+++  E       W+S+  +    + +FFE + T Y 
Sbjct: 279 CDMITDYVKYLGNLRCKNLGLAPIYEGHEKEPESMGWVSQFSNANMIKTDFFEAKSTAYA 338

Query: 118 QGAELKWD 125
           + + L  D
Sbjct: 339 KSSALVDD 346


>gi|6525234|gb|AAF15363.1|AF205376_1 ribonucleotide reductase R2 subunit [Plasmodium falciparum]
          Length = 320

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +  + P        Q  + ++ EA  +E ++  E++P   +G+N
Sbjct: 195 RDEGLHTDFNCLIYSLLDNKLPE-------QMVQNIVKEAVEVERSFICESLPCDLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G   +F +++NPF WM  +I L+ + NFFE RV +YQ+   
Sbjct: 248 SRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWMD-LISLQGKTNFFEKRVADYQKSGV 305

Query: 122 L 122
           +
Sbjct: 306 M 306


>gi|1710398|sp|P50650|RIR2_PLAF4 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase R2 subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|555613|gb|AAA50170.1| ribonucleotide reductase small subunit [Plasmodium falciparum]
          Length = 349

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +  + P        Q  + ++ EA  +E ++  E++P   +G+N
Sbjct: 224 RDEGLHTDFNCLIYSLLDNKLPE-------QIIQNIVKEAVEVERSFICESLPCDLIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G   +F +++NPF WM  +I L+ + NFFE RV +YQ+   
Sbjct: 277 SRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWMD-LISLQGKTNFFEKRVADYQKSGV 334

Query: 122 L 122
           +
Sbjct: 335 M 335


>gi|170664480|gb|ACB28637.1| small subunit ribonucleotide reductase [Myxoma virus]
 gi|170664652|gb|ACB28808.1| small subunit ribonucleotide reductase [recombinant virus
           6918VP60-T2]
          Length = 322

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K           +++  +++ EA ++E  +  E +P   +G+N
Sbjct: 198 RDEGLHCDFACLMFKHLKH-------TPSEERVASIIKEAVVIEQRFLTEALPVRLIGMN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R   ++G   +F    NPF +M E I L+ + NFFE RV++YQ+   
Sbjct: 251 CELMCQYIEFVADRLIAELGYSKIF-SATNPFDFM-ENISLEGKTNFFEKRVSDYQRMGV 308

Query: 122 L 122
           +
Sbjct: 309 V 309


>gi|9633651|ref|NP_051729.1| ribonucleotide reductase, small subunit [Myxoma virus]
 gi|6523870|gb|AAF14903.1|AF170726_19 ribonucleotide reductase, small subunit [Myxoma virus]
 gi|301134541|gb|ADK63655.1| M015L [Myxoma virus]
          Length = 322

 Score =  150 bits (381), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K           +++  +++ EA ++E  +  E +P   +G+N
Sbjct: 198 RDEGLHCDFACLMFKHLKH-------TPSEERVASIIKEAVVIEQRFLTEALPVRLIGMN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R   ++G   +F    NPF +M E I L+ + NFFE RV++YQ+   
Sbjct: 251 CELMCQYIEFVADRLIAELGYSKIF-SATNPFDFM-ENISLEGKTNFFEKRVSDYQRMGV 308

Query: 122 L 122
           +
Sbjct: 309 V 309


>gi|145352915|ref|XP_001420779.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581014|gb|ABO99072.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 346

 Score =  150 bits (381), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +  ENP       ++    ++ +A  +E  +  + +    VG+N
Sbjct: 220 RDEGLHCDFACLLYSML--ENP-----LSEKVLHQLVGDAVTIEKEFVCDALSCSLVGMN 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A     Y++F+A+R   Q+G+  L+    NPF WM E+I L+ + NFFE RV +YQ+   
Sbjct: 273 ANMMSTYIEFVADRLLLQLGVSKLYNAV-NPFDWM-ELISLQGKANFFEHRVDQYQKAGV 330

Query: 122 L 122
           +
Sbjct: 331 M 331


>gi|66475262|ref|XP_627447.1| ribonucleotide reductase small subunit, duplicated adjacent gene
           [Cryptosporidium parvum Iowa II]
 gi|9652154|gb|AAF91416.1|AF275635_1 ribonucleotide reductase R2 subunit [Cryptosporidium parvum]
 gi|46228920|gb|EAK89769.1| ribonucleotide reductase small subunit, duplicated adjacent gene
           [Cryptosporidium parvum Iowa II]
          Length = 352

 Score =  150 bits (381), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K + P         + + ++ EA  +E  +  +++P   +G+N
Sbjct: 227 RDEGLHADFACLIYKALKFKLP-------APRVQQIISEAVEVERNFLCDSLPVDLIGMN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    + +  ++  + NPF WM  +I L+ + NFFE RV EYQ    
Sbjct: 280 SRLMAQYIEFVADRLLFALDIPKIYNVS-NPFDWMD-LISLQGKTNFFEKRVGEYQMAGV 337

Query: 122 L 122
           +
Sbjct: 338 M 338


>gi|190896526|gb|ACE96776.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  150 bits (381), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++ Y  NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVY-YVANPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|325663145|ref|ZP_08151595.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 4_1_37FAA]
 gi|325470599|gb|EGC73829.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 4_1_37FAA]
          Length = 347

 Score =  150 bits (381), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 68/128 (53%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ +++ E P L+++E +++ R M+ E    EIA+ H  +     GL+
Sbjct: 219 RDENTHLWLFTNILRELRKELPELFSEEKEKEYRQMIREGCEQEIAWGHYVIGDAVSGLS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y++++ N RC  +GL P+++  E       W+S+  +    + +FFE + T Y 
Sbjct: 279 CDMITDYVKYLGNLRCKNLGLAPIYEGHEKEPESMGWVSQFSNANMIKTDFFEAKSTAYA 338

Query: 118 QGAELKWD 125
           + + L  D
Sbjct: 339 KSSALVDD 346


>gi|187903099|ref|YP_001883390.1| ribonucleoside diphosphate reductase small subunit, rr2 [Musca
           domestica salivary gland hypertrophy virus]
 gi|187384748|gb|ACD03521.1| ribonucleoside diphosphate reductase small subunit, rr2 [Musca
           domestica salivary gland hypertrophy virus]
          Length = 343

 Score =  150 bits (381), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 66/122 (54%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F + +  +       L  +  +++   ++ EA  +E  +  + +P   +G+N
Sbjct: 211 RDEGMHCDFAVLLFKRY------LVNRPSEERVGEIVREAVTIEQEFLTDALPVSLIGMN 264

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G++ ++  T+NPF +M  +I L  + NFFE RV +YQ+   
Sbjct: 265 CGLMSQYIEFVADRLLVDLGMKRIYN-TKNPFDFMD-MISLDGKTNFFEKRVGDYQRLGV 322

Query: 122 LK 123
            K
Sbjct: 323 AK 324


>gi|6969682|gb|AAF33894.1| TF4L [Vaccinia virus Tian Tan]
          Length = 319

 Score =  150 bits (381), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE L  +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLRCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               E Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQQ   
Sbjct: 248 CEMMETYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQQMGV 305

Query: 122 LK 123
           + 
Sbjct: 306 MS 307


>gi|126662515|ref|ZP_01733514.1| ribonucleoside-diphosphate reductase 1, beta subunit [Flavobacteria
           bacterium BAL38]
 gi|126625894|gb|EAZ96583.1| ribonucleoside-diphosphate reductase 1, beta subunit [Flavobacteria
           bacterium BAL38]
          Length = 325

 Score =  150 bits (381), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 35/124 (28%), Positives = 69/124 (55%), Gaps = 8/124 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F + + +       H+  K  +++   ++ +A  +E  +  E++P   +G+N
Sbjct: 198 RDEGMHCDFAVHLHSH------HIVNKVPKERITEIIVDALNIERQFITESLPVSLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+ +R   ++G + ++  + NPF +M  +I L+ + NFFE RV EYQ+   
Sbjct: 252 ATLMTQYLEFVTDRLLVELGCDRVYN-SSNPFDFMD-MISLQGKTNFFEKRVAEYQKAGV 309

Query: 122 LKWD 125
           +  D
Sbjct: 310 MNSD 313


>gi|124808087|ref|XP_001348226.1| ribonucleotide reductase small subunit [Plasmodium falciparum 3D7]
 gi|23497116|gb|AAN36665.1|AE014816_50 ribonucleotide reductase small subunit [Plasmodium falciparum 3D7]
          Length = 349

 Score =  150 bits (381), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +  + P        Q  + ++ EA  +E ++  E++P   +G+N
Sbjct: 224 RDEGLHTDFNCLIYSLLDNKLPE-------QMVQNIVKEAVEVERSFICESLPCDLIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G   +F +++NPF WM  +I L+ + NFFE RV +YQ+   
Sbjct: 277 SRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWMD-LISLQGKTNFFEKRVADYQKSGV 334

Query: 122 L 122
           +
Sbjct: 335 M 335


>gi|268575178|ref|XP_002642568.1| C. briggsae CBR-RNR-2 protein [Caenorhabditis briggsae]
 gi|187023588|emb|CAP37241.1| CBR-RNR-2 protein [Caenorhabditis briggsae AF16]
          Length = 365

 Score =  150 bits (381), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 65/121 (53%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  Q++   ++ +A  +E  +  E +P   +G+N
Sbjct: 240 RDEGLHRDFACLLYSMLQ-------NKLSQERIFEIIRDAVAIEQEFLTEALPVDMIGMN 292

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+    ++G + L+   +NPF +M E I +  + NFFE RV+EYQ+   
Sbjct: 293 CRLMSQYIEFVADHLLQELGCDKLYN-VKNPFDFM-ENISIDGKTNFFEKRVSEYQRPGV 350

Query: 122 L 122
           +
Sbjct: 351 M 351


>gi|215401283|ref|YP_002332587.1| ribonucleotide reductase small subunit [Helicoverpa armigera
           multiple nucleopolyhedrovirus]
 gi|198448783|gb|ACH88573.1| ribonucleotide reductase small subunit [Helicoverpa armigera
           multiple nucleopolyhedrovirus]
          Length = 313

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 8/123 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F     N    E      K   +    M  EA  +E  +  + +P   +G+N
Sbjct: 191 RDEGMHTDFACLYYNTRVNE------KLSYETILDMFKEAVDIEKEFFTDALPVALLGMN 244

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    +Y++F+A+R   Q+G    +    NPFP+M+  I L+ + NFFE RV EY+    
Sbjct: 245 ADMMCEYIEFVADRLLLQLGQPKYYN-ARNPFPFMN-NISLEGKTNFFERRVGEYKMFGT 302

Query: 122 LKW 124
              
Sbjct: 303 GSD 305


>gi|73852496|ref|YP_293780.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
           virus 86]
 gi|72415212|emb|CAI65449.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
           virus 86]
          Length = 325

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  K   +    ++  A  LE  +  E +P   +G+N
Sbjct: 196 RDEGLHTDFACMLYRN------HIIHKLPYETVLDIITNAVELERLFICEALPVSLIGIN 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A S   Y++F+A+R    +G    +    NPF WM E+I L+ + NFFE RV EYQ+   
Sbjct: 250 AESMSTYIKFVADRLLISLGYAKHYNVV-NPFEWM-ELISLEGKTNFFEKRVGEYQKAGV 307

Query: 122 LK 123
           + 
Sbjct: 308 MD 309


>gi|86132508|ref|ZP_01051102.1| ribonucleoside-diphosphate reductase small chain [Dokdonia
           donghaensis MED134]
 gi|85817069|gb|EAQ38253.1| ribonucleoside-diphosphate reductase small chain [Dokdonia
           donghaensis MED134]
          Length = 328

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 36/123 (29%), Positives = 67/123 (54%), Gaps = 8/123 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F + + N       HL  K  +++   ++  A  +E  +  E++P   +G+N
Sbjct: 198 RDEGVHCDFAVHLHNH------HLVNKVPKERITEIIVNALDIEREFITESLPVSLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++++ +R   ++  E ++  T NPF +M  +I L+ + NFFE RV EYQ+   
Sbjct: 252 SNLMTQYLEYVTDRLLTELDCEKVYN-TANPFDFMD-MISLQGKTNFFEKRVGEYQKAGV 309

Query: 122 LKW 124
           +K 
Sbjct: 310 VKD 312


>gi|255080138|ref|XP_002503649.1| predicted protein [Micromonas sp. RCC299]
 gi|226518916|gb|ACO64907.1| predicted protein [Micromonas sp. RCC299]
          Length = 324

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K             + + ++ +A  +E  +  + +    VG+N
Sbjct: 192 RDEGLHCDFACLLYSMLKH-------PLDPARLQEIVKDAVDIEKEFVCDALSCALVGMN 244

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    +Y++F+A+R   Q+G+E ++  T NPF WM E+I L+ + NFFE RV +YQ+   
Sbjct: 245 ADLMSEYIEFVADRLMTQLGVEKVWN-TPNPFEWM-EMISLQGKANFFEHRVDQYQKANV 302

Query: 122 LK 123
           + 
Sbjct: 303 MT 304


>gi|225164890|ref|ZP_03727109.1| Ribonucleoside-diphosphate reductase [Opitutaceae bacterium TAV2]
 gi|224800504|gb|EEG18881.1| Ribonucleoside-diphosphate reductase [Opitutaceae bacterium TAV2]
          Length = 362

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 48/123 (39%), Positives = 76/123 (61%), Gaps = 1/123 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES H+    +++  +  ENP +WT  F+++ R  + EA  LE  +  + +P   VGL
Sbjct: 232 LRDESNHIEVFRNLLMDLVEENPEIWTPGFKEELRETMREAVTLEKEFIRDCLPVNAVGL 291

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                  Y+ +IA+RR   +GL P+     +NP PW++E++D+KKE+NFFE RVTEYQ+ 
Sbjct: 292 AVDEFLTYIDYIADRRLEGVGLAPISATPIKNPLPWLAEMMDIKKEQNFFEGRVTEYQKA 351

Query: 120 AEL 122
           + L
Sbjct: 352 SSL 354


>gi|22549454|ref|NP_689227.1| putative ribonucleotide reductase small subunit-like protein
           [Mamestra configurata NPV-B]
 gi|22476633|gb|AAM95039.1| putative ribonucleotide reductase small subunit-like protein
           [Mamestra configurata NPV-B]
          Length = 313

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 8/123 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F     N    E      K   +    M  EA  +E  +  + +P   +G+N
Sbjct: 191 RDEGMHTDFACLYYNTRVNE------KLSYETILDMFKEAVDIEKEFFTDALPVALLGMN 244

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    +Y++F+A+R   Q+G    +    NPFP+M+  I L+ + NFFE RV EY+    
Sbjct: 245 ADMMCEYIEFVADRLLLQLGQPKYYN-ARNPFPFMN-NISLEGKTNFFERRVGEYKMFGT 302

Query: 122 LKW 124
              
Sbjct: 303 GSD 305


>gi|17551968|ref|NP_497821.1| RiboNucleotide Reductase family member (rnr-2) [Caenorhabditis
           elegans]
 gi|1172941|sp|P42170|RIR2_CAEEL RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|3873950|emb|CAA84688.1| C. elegans protein C03C10.3, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 381

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + ++++        K  QQ+   ++ +A  +E  +  E +P   +G+N
Sbjct: 256 RDEGLHRDFACLLYSKLQK-------KLTQQRIYDIIKDAVAIEQEFLTEALPVDMIGMN 308

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+    ++G + L+K ++NPF +M E I +  + NFFE RV+EYQ+   
Sbjct: 309 CRLMSQYIEFVADHLLVELGCDKLYK-SKNPFDFM-ENISIDGKTNFFEKRVSEYQRPGV 366

Query: 122 L 122
           +
Sbjct: 367 M 367


>gi|226950223|ref|YP_002805314.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A2 str. Kyoto]
 gi|226843961|gb|ACO86627.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A2 str. Kyoto]
          Length = 342

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 40/126 (31%), Positives = 70/126 (55%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K ENPH++T+E +++ R M+      EI +         +GLN
Sbjct: 214 RDEVTHLVLFQNIIKELKNENPHIFTEELEEEFRQMMRIGVEHEIQWGQYVTNNEILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
               E+Y+++++N R   IGL+PL+ +  ++P  W+     L   + +FFE +VT Y + 
Sbjct: 274 DELIEKYIKYLSNLRLVAIGLKPLYLEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|254455551|ref|ZP_05068980.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus
           Pelagibacter sp. HTCC7211]
 gi|207082553|gb|EDZ59979.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus
           Pelagibacter sp. HTCC7211]
          Length = 335

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 1/122 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH N  I +  +   ENP +WT + +++           E A+       G   G
Sbjct: 205 VRDETLHCNSMIRIFKEFINENPEIWTPKLKKELYEACRTIIAHEDAFIDLAFEMGPMEG 264

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A   + Y++FI NRR  Q+GLEP++   +NP  W+  +++  +  NFFE R TEY + 
Sbjct: 265 LTAQEVKDYIRFIGNRRLTQLGLEPIYDVDKNPLGWLDTMLNAVEHMNFFEGRATEYSKA 324

Query: 120 AE 121
           + 
Sbjct: 325 ST 326


>gi|290771185|emb|CAY80753.2| Rnr2p [Saccharomyces cerevisiae EC1118]
          Length = 399

 Score =  150 bits (380), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K        ++ EA  +E  Y  + +P   +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R     G +  +K  ENPF +M E I L  + NFFE RV++YQ+   
Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381

Query: 122 LK 123
           + 
Sbjct: 382 MS 383


>gi|323347997|gb|EGA82256.1| Rnr2p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 399

 Score =  150 bits (380), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K        ++ EA  +E  Y  + +P   +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R     G +  +K  ENPF +M E I L  + NFFE RV++YQ+   
Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381

Query: 122 LK 123
           + 
Sbjct: 382 MS 383


>gi|6322434|ref|NP_012508.1| Rnr2p [Saccharomyces cerevisiae S288c]
 gi|1172946|sp|P09938|RIR2_YEAST RecName: Full=Ribonucleoside-diphosphate reductase small chain 1;
           AltName: Full=Ribonucleotide reductase R2 subunit 1;
           AltName: Full=Ribonucleotide reductase small subunit 1
 gi|52695523|pdb|1SMQ|A Chain A, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
           From Saccharomyces Cerevisiae
 gi|52695524|pdb|1SMQ|B Chain B, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
           From Saccharomyces Cerevisiae
 gi|52695525|pdb|1SMQ|C Chain C, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
           From Saccharomyces Cerevisiae
 gi|52695526|pdb|1SMQ|D Chain D, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
           From Saccharomyces Cerevisiae
 gi|172450|gb|AAA34988.1| ribonucleoside diphosphate reductase small subunit [Saccharomyces
           cerevisiae]
 gi|1008142|emb|CAA89317.1| RNR2 [Saccharomyces cerevisiae]
 gi|285812874|tpg|DAA08772.1| TPA: Rnr2p [Saccharomyces cerevisiae S288c]
          Length = 399

 Score =  150 bits (380), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K        ++ EA  +E  Y  + +P   +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R     G +  +K  ENPF +M E I L  + NFFE RV++YQ+   
Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381

Query: 122 LK 123
           + 
Sbjct: 382 MS 383


>gi|114327552|ref|YP_744709.1| ribonucleotide-diphosphate reductase subunit beta [Granulibacter
           bethesdensis CGDNIH1]
 gi|114315726|gb|ABI61786.1| ribonucleoside-diphosphate reductase beta chain [Granulibacter
           bethesdensis CGDNIH1]
          Length = 339

 Score =  150 bits (380), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 43/127 (33%), Positives = 71/127 (55%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH    I + +    EN  +WT++ +Q+ R +       E A+       G   G
Sbjct: 209 VRDETLHCLSIIKLFHVFIDENREIWTEDLRQEIRQICATIVEHEDAFIDLAFELGSVEG 268

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L+A   + Y+++IA+RR  Q+GLEPLF    NP PW+ ++++  +  NFFE R TEY + 
Sbjct: 269 LDAAQVKSYIRYIADRRLIQLGLEPLFHVERNPLPWIDDMLNAVEHANFFENRATEYSRA 328

Query: 120 AEL-KWD 125
           + +  W+
Sbjct: 329 STVGTWE 335


>gi|151945057|gb|EDN63308.1| ribonucleotide reductase subunit [Saccharomyces cerevisiae YJM789]
 gi|190409471|gb|EDV12736.1| ribonucleotide reductase subunit [Saccharomyces cerevisiae RM11-1a]
 gi|256271075|gb|EEU06176.1| Rnr2p [Saccharomyces cerevisiae JAY291]
          Length = 399

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K        ++ EA  +E  Y  + +P   +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R     G +  +K  ENPF +M E I L  + NFFE RV++YQ+   
Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381

Query: 122 LK 123
           + 
Sbjct: 382 MS 383


>gi|283481249|emb|CAZ69365.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
           virus 99B1]
          Length = 325

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  K   +    ++  A  LE  +  E +P   +G+N
Sbjct: 196 RDEGLHTDFACMLYRN------HIIHKLPYETVLDIITNAVELERLFICEALPVSLIGIN 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A S   Y++F+A+R    +G    +    NPF WM E+I L+ + NFFE RV EYQ+   
Sbjct: 250 AESMSTYIKFVADRLLISLGYAKHYNVV-NPFEWM-ELISLEGKTNFFEKRVGEYQKAGV 307

Query: 122 LK 123
           + 
Sbjct: 308 MD 309


>gi|239982206|ref|ZP_04704730.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           albus J1074]
 gi|291454052|ref|ZP_06593442.1| ribonucleotide-diphosphate reductase subunit small [Streptomyces
           albus J1074]
 gi|291357001|gb|EFE83903.1| ribonucleotide-diphosphate reductase subunit small [Streptomyces
           albus J1074]
          Length = 350

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 40/126 (31%), Positives = 76/126 (60%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+  + Q++   ML EA   E+ +A +    G  G+N
Sbjct: 224 RDETMHMSFAFDVVDTVRKEEPELFDDKLQEQVVAMLKEAVEAELQFARDLCGDGLPGMN 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
             S  +Y++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE RV+ YQ    
Sbjct: 284 TESMREYLECVADQRLTRLGFAPVY-GSQNPFSFM-ELQGVQELTNFFERRVSAYQVAVE 341

Query: 120 AELKWD 125
             + +D
Sbjct: 342 GTVSFD 347


>gi|302554045|ref|ZP_07306387.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           viridochromogenes DSM 40736]
 gi|302471663|gb|EFL34756.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           viridochromogenes DSM 40736]
          Length = 341

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 42/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+  + +Q+   ML EA   E+ +A +    G  G+N
Sbjct: 215 RDETMHMSFAFDVVDTVRKEEPELFDDQLRQEVTDMLREAVEAELQFARDLCGDGLPGMN 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 275 TESMRQYLECVADQRLTRLGFAPVY-GSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 332

Query: 122 LKWD 125
              D
Sbjct: 333 GTVD 336


>gi|207343947|gb|EDZ71248.1| YJL026Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 399

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K        ++ EA  +E  Y  + +P   +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R     G +  +K  ENPF +M E I L  + NFFE RV++YQ+   
Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381

Query: 122 LK 123
           + 
Sbjct: 382 MS 383


>gi|262263187|dbj|BAI48096.1| ribonucleotide reductase M2 [Sus scrofa]
          Length = 355

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 9/114 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 247 RDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMN 299

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV E
Sbjct: 300 CTLMKQYIEFVADRLMLELGFGKVFR-VENPFDFM-ENISLEGKTNFFEKRVGE 351


>gi|282849773|ref|ZP_06259157.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           parvula ATCC 17745]
 gi|282580710|gb|EFB86109.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           parvula ATCC 17745]
          Length = 342

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I +++ E P L+T E + K   M+ +    EIA+         +GLN
Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWGQYITDDKILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
               E+Y++++AN R   IGL  L+ +  ENP  W+    +L   + +FFE +VT Y + 
Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKENPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|172448|gb|AAA34987.1| ribonucleotide reductase subunit 2 (RNR2) [Saccharomyces
           cerevisiae]
          Length = 399

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K        ++ EA  +E  Y  + +P   +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R     G +  +K  ENPF +M E I L  + NFFE RV++YQ+   
Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381

Query: 122 LK 123
           + 
Sbjct: 382 MS 383


>gi|323308423|gb|EGA61668.1| Rnr2p [Saccharomyces cerevisiae FostersO]
          Length = 399

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K        ++ EA  +E  Y  + +P   +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R     G +  +K  ENPF +M E I L  + NFFE RV++YQ+   
Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381

Query: 122 LK 123
           + 
Sbjct: 382 MS 383


>gi|283768723|ref|ZP_06341634.1| ribonucleoside-diphosphate reductase, beta subunit [Bulleidia
           extructa W1219]
 gi|283104509|gb|EFC05882.1| ribonucleoside-diphosphate reductase, beta subunit [Bulleidia
           extructa W1219]
          Length = 348

 Score =  150 bits (380), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ +++ E P L+T    Q  + M+HE    EIA+    +     GLN
Sbjct: 220 RDENTHLWLFRNILLELQKEEPELFTDSNIQMIKDMIHEGVQQEIAWGQYVIGNNIPGLN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
           +   E Y++++ N R   +GL  L++ Y E P    W+ +  D    + +FFE RVT Y 
Sbjct: 280 SQMVEDYIKYLGNTRFATLGLGNLYEGYEEEPETMRWVKQYSDANMVKTDFFEARVTAYA 339

Query: 118 QGAELKWD 125
           + + ++ D
Sbjct: 340 KSSAIEDD 347


>gi|221060582|ref|XP_002260936.1| ribonucleotide reductase small subunit [Plasmodium knowlesi strain
           H]
 gi|193811010|emb|CAQ42908.1| ribonucleotide reductase small subunit,putative [Plasmodium
           knowlesi strain H]
          Length = 349

 Score =  150 bits (379), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 68/121 (56%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P        +  + ++ EA  +E ++  E++P   +G+N
Sbjct: 224 RDEGLHTDFNCLIYSLLENKLPE-------EVVQNIVKEAVEVERSFICESLPCDLIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G   +F + +NPF WM  +I L+ + NFFE RV +YQ+   
Sbjct: 277 SRLMSQYIEFVADRLLECLGSRKIF-HAKNPFNWMD-LISLQGKTNFFEKRVADYQKSGV 334

Query: 122 L 122
           +
Sbjct: 335 M 335


>gi|302536805|ref|ZP_07289147.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces sp.
           C]
 gi|302445700|gb|EFL17516.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces sp.
           C]
          Length = 356

 Score =  150 bits (379), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ +  +    G  G+N
Sbjct: 230 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLKEAVEAELQFGRDLCGDGLPGMN 289

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE R + YQ   E
Sbjct: 290 TDSMREYLECVADQRLVRLGFPPVY-GSQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 347

Query: 122 LKWD 125
              D
Sbjct: 348 GTVD 351


>gi|209966751|ref|YP_002299666.1| ribonucleotide-diphosphate reductase subunit beta [Rhodospirillum
           centenum SW]
 gi|209960217|gb|ACJ00854.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodospirillum
           centenum SW]
          Length = 322

 Score =  150 bits (379), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH    I +      ENP +WT+ FQ++           E A+       G   G
Sbjct: 191 VRDETLHTLSMIKLFRTFVNENPQVWTEAFQRELTVCCETIVHHEDAFIDLAFEMGPVEG 250

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           + A   ++Y+++IA+RR  Q+GLEP+++  +NP PWM  +++  +  NFFE R TEY + 
Sbjct: 251 MTAEDVKRYIRWIADRRLGQLGLEPVYRIEKNPLPWMDAILNGIEHTNFFENRATEYSKA 310

Query: 120 AE-LKWD 125
           A    WD
Sbjct: 311 ATRGTWD 317


>gi|320536436|ref|ZP_08036471.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           phagedenis F0421]
 gi|320146705|gb|EFW38286.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           phagedenis F0421]
          Length = 363

 Score =  150 bits (379), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L+T E  +  R M+ E    EI + H  +     GLN
Sbjct: 235 RDENTHLWLFRSIIQELQKEEPQLFTPENIEMFRAMIKEGCEQEIKWGHYVIGDDIPGLN 294

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y+Q++ N RC  +G EPL++ + E P    W+S+  +    + +FFE + T Y 
Sbjct: 295 KQMITDYIQYLGNLRCENLGFEPLYEGHREEPASMSWVSQYSNANLIKTDFFEAKSTAYA 354

Query: 118 QGAELKWD 125
           + + +  D
Sbjct: 355 KSSAMVDD 362


>gi|29829569|ref|NP_824203.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           avermitilis MA-4680]
 gi|29606677|dbj|BAC70738.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptomyces avermitilis MA-4680]
          Length = 338

 Score =  150 bits (379), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 42/124 (33%), Positives = 73/124 (58%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  +V++ ++ E P L+  E QQ+   ML EA   E+ +  +    G  G+N
Sbjct: 212 RDETMHMSFAFEVVDTVRKEEPELFDDELQQQVTDMLREAVEAELQFGRDLCGDGLPGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 272 TESMRQYLECVADQRLQRLGFAPVY-GSENPFSFM-ELQGVQELTNFFERRASAYQVAVE 329

Query: 122 LKWD 125
              D
Sbjct: 330 GTVD 333


>gi|313894221|ref|ZP_07827786.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           oral taxon 158 str. F0412]
 gi|313441045|gb|EFR59472.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           oral taxon 158 str. F0412]
          Length = 342

 Score =  150 bits (379), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I +++ E P L+T E ++K   M+ + T  EIA+         +GLN
Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEEKITDMIRQGTENEIAWGQYITDDKILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
               E+Y++++AN R   IGL  L+ +  +NP  W+    +L   + +FFE +VT Y + 
Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|269798663|ref|YP_003312563.1| ribonucleotide reductase [Veillonella parvula DSM 2008]
 gi|294792661|ref|ZP_06757808.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           6_1_27]
 gi|269095292|gb|ACZ25283.1| ribonucleotide reductase [Veillonella parvula DSM 2008]
 gi|294456560|gb|EFG24923.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           6_1_27]
          Length = 342

 Score =  150 bits (379), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I +++ E P L+T E + K   M+ +    EIA+         +GLN
Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWGQYITDDKILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
               E+Y++++AN R   IGL  L+ +  +NP  W+    +L   + +FFE +VT Y + 
Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|182419335|ref|ZP_02950587.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           butyricum 5521]
 gi|237666940|ref|ZP_04526925.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182376666|gb|EDT74238.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           butyricum 5521]
 gi|237658139|gb|EEP55694.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 344

 Score =  149 bits (378), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 41/126 (32%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ EN  L+T+E + + R M+      EI + H  +     G+N
Sbjct: 218 RDENTHLWLFRNIIKELQNENAELFTEEIKNELREMMKTGVEQEILWGHYVIGDKIQGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
               E+Y++++ N+R  +I LEPLF+  + NP PW+    +    + +FFE R T Y + 
Sbjct: 278 KKLIEEYIKYLGNKRLKEINLEPLFEGHDVNPAPWVDRQSNANSVKTDFFEARSTAYAKA 337

Query: 120 AELKWD 125
           A L  D
Sbjct: 338 ATLVDD 343


>gi|303228685|ref|ZP_07315510.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           atypica ACS-134-V-Col7a]
 gi|303230495|ref|ZP_07317254.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           atypica ACS-049-V-Sch6]
 gi|302514861|gb|EFL56844.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           atypica ACS-049-V-Sch6]
 gi|302516665|gb|EFL58582.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           atypica ACS-134-V-Col7a]
          Length = 342

 Score =  149 bits (378), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I +++ E P L+T E + K   M+ +    EIA+         +GLN
Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWGQYITDDKILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
               E+Y++++AN R   IGL  L+ +  +NP  W+    +L   + +FFE +VT Y + 
Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|224438210|ref|ZP_03659145.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           cinaedi CCUG 18818]
 gi|313144656|ref|ZP_07806849.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           cinaedi CCUG 18818]
 gi|313129687|gb|EFR47304.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           cinaedi CCUG 18818]
          Length = 348

 Score =  149 bits (378), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 66/125 (52%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL     +IN ++ E PHL+T   +++   M  +A  +E  +         +GL 
Sbjct: 224 RDEVTHLLVFQQMINALRKEQPHLFTPSLEEEVIAMFQKAVEIESVWGEYITQGQILGLT 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120
           A    +Y+Q++A+ R   +GL  ++ +++NP  W+ +       + NFFE +VT Y +G+
Sbjct: 284 AEIIREYIQYLADMRLRAVGLREIY-HSKNPIKWVEQFASFNDQKTNFFEAKVTNYSKGS 342

Query: 121 ELKWD 125
            + +D
Sbjct: 343 -INFD 346


>gi|68161126|gb|AAY86994.1| ribonucleotide reductase M2b [Ictalurus punctatus]
          Length = 192

 Score =  149 bits (378), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 36/114 (31%), Positives = 64/114 (56%), Gaps = 9/114 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH NF   + +Q++        K    + + ++ +A  +E  +  E +P   +G+N
Sbjct: 88  RDEGLHCNFACLIYSQLQK-------KPSADRVKDIITKAVRIEQEFLTEALPVDLIGIN 140

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
           +   +QY++F+A+R    +G+  +++  ENPF +M E I L+ + NFFE RV E
Sbjct: 141 SYLMKQYIEFVADRLLTDLGIPKVYE-AENPFDFM-EFISLEGKTNFFEKRVAE 192


>gi|308490921|ref|XP_003107652.1| hypothetical protein CRE_13354 [Caenorhabditis remanei]
 gi|308250521|gb|EFO94473.1| hypothetical protein CRE_13354 [Caenorhabditis remanei]
          Length = 147

 Score =  149 bits (378), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  Q++   ++ +A  +E  +  E +P   +G+N
Sbjct: 22  RDEGLHRDFACLLYSMLQ-------NKLTQERIFEIIKDAVCIEQEFLTEALPVDMIGMN 74

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+    ++G + L+   +NPF +M E I +  + NFFE RV+EYQ+   
Sbjct: 75  CRLMSQYIEFVADHLLAELGCDKLYN-VKNPFDFM-ENISIDGKTNFFEKRVSEYQRPGV 132

Query: 122 LK 123
           + 
Sbjct: 133 MS 134


>gi|227498392|ref|ZP_03928542.1| ribonucleoside-diphosphate reductase [Acidaminococcus sp. D21]
 gi|226903854|gb|EEH89772.1| ribonucleoside-diphosphate reductase [Acidaminococcus sp. D21]
          Length = 342

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    +++ +++ E P L+TKE       M+ +    EI +         +GLN
Sbjct: 214 RDEVTHLILFQNILRELRHERPDLFTKEQDAHIADMIRQGAENEIKWGQYITDDKILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
               E+Y++++AN R   IGL PL+ + ++NP  W+    +L   + +FFE +VT Y + 
Sbjct: 274 NGLIEKYIKYLANIRLEAIGLAPLYPEISQNPMEWIESFSNLNGTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|238018468|ref|ZP_04598894.1| hypothetical protein VEIDISOL_00295 [Veillonella dispar ATCC 17748]
 gi|237864939|gb|EEP66229.1| hypothetical protein VEIDISOL_00295 [Veillonella dispar ATCC 17748]
          Length = 342

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I +++ E P L+T E + K   M+ +    EIA+         +GLN
Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWGQYITDDKILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
               E+Y++++AN R   IGL  L+ +  +NP  W+    +L   + +FFE +VT Y + 
Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|150024561|ref|YP_001295387.1| ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium
           psychrophilum JIP02/86]
 gi|149771102|emb|CAL42569.1| Ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium
           psychrophilum JIP02/86]
          Length = 325

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 39/124 (31%), Positives = 71/124 (57%), Gaps = 8/124 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F + + N       HL  K  +++ R+++ +A  +E  +  E++P   +G+N
Sbjct: 198 RDEGVHCDFAVHLHNH------HLVNKVPKERIRSIIVDALNIEREFITESLPVSLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R   ++G +  +  T NPF +M  +I L+ + NFFE +V EYQ+   
Sbjct: 252 AVLMTQYLEFVADRLLVELGCDREYN-TANPFDFMD-MISLQGKTNFFEKKVAEYQKAGV 309

Query: 122 LKWD 125
           +  D
Sbjct: 310 MNTD 313


>gi|330804590|ref|XP_003290276.1| hypothetical protein DICPUDRAFT_56591 [Dictyostelium purpureum]
 gi|325079602|gb|EGC33194.1| hypothetical protein DICPUDRAFT_56591 [Dictyostelium purpureum]
          Length = 335

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 9/120 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH NF   +  ++         K   +    ++ +A + E  +  +++P   +G+N
Sbjct: 201 RDEGLHCNFACLLYTKLI-------NKLESKTLEAIIRDAVVCEKEFICDSLPVDLIGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           + S  QY++F A+R    +G + ++    NPF WM E+I L+++ NFFE +V EY +   
Sbjct: 254 SRSMSQYIEFCADRLLVSLGYKKIYN-ASNPFDWM-EMISLQRKTNFFEGKVAEYAKTGV 311


>gi|297449|emb|CAA46231.1| ribonucleotide reductase, small subunit [Schizosaccharomyces pombe]
 gi|447147|prf||1913428B ribonucleotide reductase:SUBUNIT=small
          Length = 391

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K        +  ++  + ++ EA  +E  Y  + +P   +G+N
Sbjct: 261 RDEGLHTDFACLMFSHLKH-------RPGRKLLKPIIVEAVDIEKEYFTDALPVSLLGMN 313

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G +  +  T NPF +M E I L  + NFFE +V++YQ    
Sbjct: 314 KDLMCQYIEFVADRLLVALGNDKYYNVT-NPFDFM-ENISLAGKTNFFEKKVSDYQIAGV 371

Query: 122 LK 123
           + 
Sbjct: 372 MS 373


>gi|82538850|ref|XP_723858.1| ribonucleotide reductase small chain [Plasmodium yoelii yoelii str.
           17XNL]
 gi|145580416|pdb|2P1I|A Chain A, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580417|pdb|2P1I|B Chain B, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580418|pdb|2P1I|C Chain C, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580419|pdb|2P1I|D Chain D, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580420|pdb|2P1I|E Chain E, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580421|pdb|2P1I|F Chain F, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580422|pdb|2P1I|G Chain G, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580423|pdb|2P1I|H Chain H, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|23478298|gb|EAA15423.1| Ribonucleotide reductase, small chain [Plasmodium yoelii yoelii]
          Length = 349

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 68/121 (56%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P           + ++ EA  +E ++  E++P   +G+N
Sbjct: 224 RDEGLHTDFNCLIYSLLENKLPE-------NVVQNIVKEAVEVERSFICESLPCDLIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G   +F +++NPF WM  +I L+ + NFFE RV +YQ+   
Sbjct: 277 SRLMSQYIEFVADRLLECLGCSKVF-HSKNPFNWMD-LISLQGKTNFFEKRVADYQKSGV 334

Query: 122 L 122
           +
Sbjct: 335 M 335


>gi|294463759|gb|ADE77404.1| unknown [Picea sitchensis]
          Length = 289

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K +         +++ + ++ +A  +E  +  E +    VG+N
Sbjct: 160 RDEGLHCDFACLLYSLLKSKL-------SEERVKAIVRDAVDIEREFVCEALSCDLVGMN 212

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++FIA+R    +G   ++ + ENPF WM  +I L+ + NFFE RV +YQ+ + 
Sbjct: 213 ATLMSQYIKFIADRLLVALGHGKMY-HVENPFDWMD-LISLQGKTNFFERRVGDYQKASI 270

Query: 122 LK 123
           + 
Sbjct: 271 MS 272


>gi|86134368|ref|ZP_01052950.1| ribonucleoside-diphosphate reductase small chain [Polaribacter sp.
           MED152]
 gi|85821231|gb|EAQ42378.1| ribonucleoside-diphosphate reductase small chain [Polaribacter sp.
           MED152]
          Length = 323

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 37/120 (30%), Positives = 68/120 (56%), Gaps = 8/120 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F + +       N H+  +  + + + ++ +A  +E  +  E++P   +G+N
Sbjct: 198 RDEGMHCDFAVHL------HNNHIVNRVPKDRIKEIIVDALDIEREFVTESLPVSLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+ +R   + G E ++  T NPF +M E+I L+ + NFFE RV+EYQ+   
Sbjct: 252 AKLMTQYLEFVTDRLLLEFGCEKVYDVT-NPFDFM-EMISLEGKTNFFEKRVSEYQKAGV 309


>gi|227871657|ref|ZP_03990072.1| ribonucleoside-diphosphate reductase [Oribacterium sinus F0268]
 gi|227842499|gb|EEJ52714.1| ribonucleoside-diphosphate reductase [Oribacterium sinus F0268]
          Length = 347

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL F  +++ ++K E P L+ +    +   M+ +    EIA+    +     GLN
Sbjct: 219 RDENTHLWFFRNMLLELKKEEPELFDEAHIAEITEMVKKGVEQEIAWGQYVIGDSIPGLN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
               E Y++++ N R   +GL  L++ Y + P    W+S+  D    + +FFE R T Y 
Sbjct: 279 GKMVEDYIRYLGNLRYRSLGLPNLYEGYEKEPESMKWVSQYADANMVKTDFFEARSTAYA 338

Query: 118 QGAELKWD 125
           +   ++ D
Sbjct: 339 KSTAIEDD 346


>gi|213402763|ref|XP_002172154.1| ribonucleoside-diphosphate reductase small chain
           [Schizosaccharomyces japonicus yFS275]
 gi|212000201|gb|EEB05861.1| ribonucleoside-diphosphate reductase small chain
           [Schizosaccharomyces japonicus yFS275]
          Length = 392

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + + +K        +  ++    ++ EA  +E  Y  + +P   +G+N
Sbjct: 263 RDEGVHTDFACLMFSHLKH-------RPGKKVVERIIIEAVNIEKEYFTDALPVYLLGMN 315

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G E  +  T NPF +M E I L  + NFFE +V++YQ    
Sbjct: 316 CDLMCQYIEFVADRLLLSLGNEKYYNVT-NPFDFM-ENISLAGKTNFFEKKVSDYQIAGV 373

Query: 122 L 122
           +
Sbjct: 374 M 374


>gi|210616053|ref|ZP_03290925.1| hypothetical protein CLONEX_03144 [Clostridium nexile DSM 1787]
 gi|210149961|gb|EEA80970.1| hypothetical protein CLONEX_03144 [Clostridium nexile DSM 1787]
          Length = 355

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ ++K E P L+T+++  + R+M+ E    EI + H  +     GLN
Sbjct: 227 RDENTHLWLFRNILIELKKEQPDLFTEQYIDEYRSMIKEGCEQEIKWGHYVIGDDVQGLN 286

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y+Q++ N RC  +G  P+++  E       W+S+  +    + +FFE R T Y 
Sbjct: 287 REMITDYVQYLGNLRCTNLGFAPIYEGHETEPESMRWVSQYSNANAIKTDFFEARSTAYA 346

Query: 118 QGAELKWD 125
           + + L  D
Sbjct: 347 KSSALVDD 354


>gi|256785295|ref|ZP_05523726.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           lividans TK24]
 gi|289769189|ref|ZP_06528567.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           lividans TK24]
 gi|289699388|gb|EFD66817.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           lividans TK24]
          Length = 343

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 41/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+  + +++   ML EA   E+ +A +    G  G+N
Sbjct: 217 RDETMHMSFAFDVVDTVRKEEPELFDDQLREQVTDMLREAVEAELQFARDLCGDGLPGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 277 TDSMRQYLECVADQRLTRLGFAPVY-GSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 334

Query: 122 LKWD 125
              D
Sbjct: 335 GTVD 338


>gi|21223593|ref|NP_629372.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           coelicolor A3(2)]
 gi|7328345|emb|CAB82486.1| class I ribonucleotide-diphosphate reductase small subunit chain
           [Streptomyces coelicolor A3(2)]
 gi|8546891|emb|CAB94610.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           coelicolor A3(2)]
          Length = 343

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 41/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+  + +++   ML EA   E+ +A +    G  G+N
Sbjct: 217 RDETMHMSFAFDVVDTVRKEEPELFDDQLREQVTDMLREAVEAELQFARDLCGDGLPGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 277 TDSMRQYLECVADQRLTRLGFAPVY-GSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 334

Query: 122 LKWD 125
              D
Sbjct: 335 GTVD 338


>gi|282879357|ref|ZP_06288101.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           buccalis ATCC 35310]
 gi|282881358|ref|ZP_06290037.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           timonensis CRIS 5C-B1]
 gi|281298554|gb|EFA90979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           buccalis ATCC 35310]
 gi|281304764|gb|EFA96845.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           timonensis CRIS 5C-B1]
          Length = 347

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P ++T E  +    M+ E    EIA+    +     GLN
Sbjct: 219 RDENTHLWLFRNIIKELKKEEPEMFTPEKVKVYEEMMREGVRQEIAWGQYVIGNDIQGLN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
           A     Y+ ++ N R H +G + L++   + P    W+++  D    + +FFE + T Y 
Sbjct: 279 AQMVTDYIHYLGNLRWHSLGFDYLYEDNQKEPEDMKWVAQYSDPNMVKTDFFEAKSTAYA 338

Query: 118 QGAELKWD 125
           +   ++ D
Sbjct: 339 KSTAIEDD 346


>gi|292658982|gb|ADE34370.1| ribonucleotide reductase small chain [Turbot reddish body
           iridovirus]
          Length = 312

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  Q       +  K  Q+ +  ++ +A  +E A+  E +    +G+N
Sbjct: 188 RDEGLHCDFACMLFRQ-------MANKPSQEDAHQIISDAVDIETAFFREALKTPLLGMN 240

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           + S   Y+QF+A+R    +G   ++    NPF +M   I ++ + NFFE RV+EYQ+   
Sbjct: 241 SDSMRLYIQFVADRLLDALGYAKMYNVA-NPFDFMD-NISIEGKTNFFERRVSEYQRMGV 298

Query: 122 LK 123
             
Sbjct: 299 FT 300


>gi|308809930|ref|XP_003082274.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
           tauri]
 gi|116060742|emb|CAL57220.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
           tauri]
          Length = 382

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   ++           +     ++ +A  +E  +  + +    VG+N
Sbjct: 256 RDEGLHCDFACLLYGMLQ-------NPLSEATLHHIVGDAVKIEKEFVCDALSCSLVGMN 308

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A     Y++F+A+R   Q+G   LF    NPF WM E+I L+ + NFFE RV +YQ+   
Sbjct: 309 ADMMSTYIEFVADRLLIQLGASKLFNAV-NPFDWM-ELISLQGKANFFEHRVDQYQKAGV 366

Query: 122 L 122
           +
Sbjct: 367 M 367


>gi|288800286|ref|ZP_06405744.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
           oral taxon 299 str. F0039]
 gi|288332499|gb|EFC70979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
           oral taxon 299 str. F0039]
          Length = 347

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 6/129 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T +       M+ E    EIA+    +     GLN
Sbjct: 219 RDENTHLWLFRNIIQELKKEEPDLFTPDKVAVYEAMMREGVEQEIAWGQYVIGNDIQGLN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT----ENPFPWMSEVIDLKK-EKNFFETRVTEY 116
           A   + Y++++ N R H +G + L++      EN   W+S+  +    + +FFE + T Y
Sbjct: 279 AQMVDDYIRYLGNLRWHSLGFDYLYEDNRTEPEN-MRWVSQYSNANMVKTDFFEAKSTAY 337

Query: 117 QQGAELKWD 125
            +   L+ D
Sbjct: 338 AKSTALEDD 346


>gi|27923845|sp|Q9QTF2|RIR2_RSIV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|5688956|dbj|BAA82755.1| ribonucleotide reductase small subunit [Red sea bream iridovirus]
 gi|327396894|dbj|BAK14260.1| ribonucleotide diphosphate reductase small subunit [Red sea bream
           iridovirus]
          Length = 312

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  Q       +  K  Q  +  ++ +A  +E A+  E +    +G+N
Sbjct: 188 RDEGLHCDFACMLFRQ-------MANKPCQDDAHQIISDAVDIETAFFREALKTPLLGMN 240

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           + S + Y+QF+A+R    +G   ++  + NPF +M   I ++ + NFFE RV+EYQ+   
Sbjct: 241 SDSMKLYIQFVADRLLDALGYAKMYNVS-NPFDFMD-NISIEGKTNFFERRVSEYQRMGV 298

Query: 122 LK 123
             
Sbjct: 299 FT 300


>gi|225677302|ref|ZP_03788281.1| ribonucleotide-diphosphate reductase beta [Wolbachia endosymbiont
           of Muscidifurax uniraptor]
 gi|225590665|gb|EEH11913.1| ribonucleotide-diphosphate reductase beta [Wolbachia endosymbiont
           of Muscidifurax uniraptor]
          Length = 329

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGL 60
           RDE+LH N  I + N    EN  +W  EF+++  +       LE  +           GL
Sbjct: 193 RDETLHTNSIIMLFNTFIKENNEIWDDEFKEELYSACRTIVELEDEFIKLAFDFGDVEGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A     Y+ ++ANRR  Q+GLE ++   +NP PW+ E+++  +  NFFE RVTEY + A
Sbjct: 253 SAEEVRNYIHYVANRRLMQLGLESIYDVNDNPIPWLDEILNGVEHTNFFENRVTEYSRAA 312

Query: 121 -ELKWD 125
            +  W+
Sbjct: 313 TQGTWE 318


>gi|294794440|ref|ZP_06759576.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           3_1_44]
 gi|294454770|gb|EFG23143.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           3_1_44]
          Length = 342

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I +++ E P L+T E + K   M+ + T  EIA+         +GLN
Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGTENEIAWGQYITDDKILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
               E+Y++++AN R   IGL  L+ +  +NP  W+    +L   + +FFE +VT Y + 
Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|241951880|ref|XP_002418662.1| ribonucleoside diphosphate reductase, putative [Candida
           dubliniensis CD36]
 gi|223642001|emb|CAX43965.1| ribonucleoside diphosphate reductase, putative [Candida
           dubliniensis CD36]
          Length = 394

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H ++   + + +K        K   +    ++ EA  +E  Y  + +P   +G+N
Sbjct: 266 RDEGIHTDYACLLFSYLK-------NKPSPEIIEKIITEAVTIEKKYFSDALPVSLLGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R     G +  +  T NPF +M E I L  + NFFE RV++YQ+   
Sbjct: 319 CDLMCQYVEFVADRLLVAFGNKKYYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 376

Query: 122 LK 123
           ++
Sbjct: 377 ME 378


>gi|58584525|ref|YP_198098.1| ribonucleotide-diphosphate reductase subunit beta [Wolbachia
           endosymbiont strain TRS of Brugia malayi]
 gi|58418841|gb|AAW70856.1| Ribonucleotide reductase, beta subunit [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
          Length = 331

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 45/126 (35%), Positives = 70/126 (55%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60
           RDE+LH N  I++ N    EN  +W  EF++   +       LE  +       G   GL
Sbjct: 193 RDETLHTNSIINLFNTFIKENNEIWNDEFKEGLYSACRTIVGLEDEFIKLAFDLGDVEGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A     Y+++IANRR  Q+GL+P++   +NP PW+ E+++  +  NFFE RVTEY + A
Sbjct: 253 SAEEVRNYIRYIANRRLMQLGLKPIYDINDNPLPWLDEILNGVEHTNFFENRVTEYSRAA 312

Query: 121 -ELKWD 125
            +  W+
Sbjct: 313 TQGTWE 318


>gi|153940168|ref|YP_001392091.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum F str. Langeland]
 gi|170756361|ref|YP_001782419.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum B1 str. Okra]
 gi|152936064|gb|ABS41562.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum F str. Langeland]
 gi|169121573|gb|ACA45409.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum B1 str. Okra]
 gi|322807123|emb|CBZ04697.1| ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Clostridium botulinum H04402 065]
          Length = 342

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K EN H++T+E +++ R M+      EI +         +GLN
Sbjct: 214 RDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRMGVEHEIQWGQYVTNNEILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
               E+Y+++++N R   IGL+PL+ +  ++P  W+     L   + +FFE +VT Y + 
Sbjct: 274 DELIEKYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|294631326|ref|ZP_06709886.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. e14]
 gi|292834659|gb|EFF93008.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. e14]
          Length = 339

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 42/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+  + +Q+   ML EA   E+ +A +    G  G+N
Sbjct: 213 RDETMHMSFAFDVVDTVRKEEPDLFDDQLEQQVTDMLREAVEAELQFARDLCGDGLPGMN 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 273 TDSMRQYLECVADQRLTRLGFAPVY-GSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 330

Query: 122 LKWD 125
              D
Sbjct: 331 GTVD 334


>gi|120437796|ref|YP_863482.1| ribonucleoside-diphosphate reductase small chain [Gramella forsetii
           KT0803]
 gi|117579946|emb|CAL68415.1| ribonucleoside-diphosphate reductase small chain [Gramella forsetii
           KT0803]
          Length = 325

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 40/124 (32%), Positives = 71/124 (57%), Gaps = 8/124 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F + + NQ      HL  +  ++K R +L +A  +E  +  E++P   +G+N
Sbjct: 198 RDEGMHCDFAVHLHNQ------HLVNQVPKEKIREILIDALNIEREFVTESLPVSLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+ +R   ++  E  +  + NPF +M  +I+L+ + NFFE RV+EYQ+   
Sbjct: 252 AKLMTQYLEFVTDRLLVELDCEKEYNVS-NPFDFMD-MINLQGKTNFFEKRVSEYQKAGV 309

Query: 122 LKWD 125
           +  D
Sbjct: 310 MNKD 313


>gi|42520108|ref|NP_966023.1| ribonucleotide-diphosphate reductase subunit beta [Wolbachia
           endosymbiont of Drosophila melanogaster]
 gi|58696705|ref|ZP_00372253.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila simulans]
 gi|58698234|ref|ZP_00373154.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila ananassae]
 gi|225630036|ref|YP_002726827.1| ribonucleotide-diphosphate reductase beta subunit [Wolbachia sp.
           wRi]
 gi|42409845|gb|AAS13957.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila melanogaster]
 gi|58535261|gb|EAL59340.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila ananassae]
 gi|58537117|gb|EAL60231.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila simulans]
 gi|225592017|gb|ACN95036.1| ribonucleotide-diphosphate reductase beta subunit [Wolbachia sp.
           wRi]
          Length = 329

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 44/126 (34%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60
           RDE+LH N  I + N    EN  +W  EF+++  +       LE  +       G   GL
Sbjct: 193 RDETLHTNSIIMLFNTFIKENNEIWDNEFKEELYSACRTIVELEDEFIKLAFDLGDVEGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A     Y++++ANRR  Q+GLE ++   +NP PW+ E+++  +  NFFE RVTEY + A
Sbjct: 253 SAEEVRNYIRYVANRRLMQLGLESIYDVNDNPIPWLDEILNGVEHTNFFENRVTEYSRAA 312

Query: 121 -ELKWD 125
            +  W+
Sbjct: 313 TQGTWE 318


>gi|19881429|ref|NP_612246.1| putative ribonucleotide reductase small subunit [Infectious spleen
           and kidney necrosis virus]
 gi|19773634|gb|AAL98748.1|AF371960_24 putative ribonucleotide reductase small subunit [infectious spleen
           and kidney necrosis virus]
          Length = 312

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  Q       +  K  Q  +  ++ +A  +E A+  E +    +G+N
Sbjct: 188 RDEGLHCDFACMLFRQ-------MANKPCQDDAHQIISDAVDIETAFFQEALKTPLLGMN 240

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           + S   Y+QF+A+R    +G   ++    NPF +M   I ++ + NFFE RV+EYQ+   
Sbjct: 241 SDSMRLYIQFVADRLLDALGYAKMYNVA-NPFDFMD-NISIEGKTNFFERRVSEYQRMGV 298

Query: 122 LK 123
             
Sbjct: 299 FT 300


>gi|168179222|ref|ZP_02613886.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum NCTC 2916]
 gi|182669722|gb|EDT81698.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum NCTC 2916]
          Length = 342

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K EN H++T+E +++ R M+      EI +         +GLN
Sbjct: 214 RDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRIGVEHEIQWGQYVTNNEILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
               E+Y+++++N R   IGL+PL+ +  ++P  W+     L   + +FFE +VT Y + 
Sbjct: 274 DELIERYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|325475472|gb|EGC78653.1| ribonucleoside-diphosphate reductase [Treponema denticola F0402]
          Length = 351

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L+T +  +  R M+ E    EIA+ +  +     GLN
Sbjct: 223 RDENTHLWLFRSMIQELQKEEPQLFTPQNVELFRGMIREGCEQEIAWGNYVIGNDIPGLN 282

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
           +     Y+Q++ N RC  +G  P++  + E P    W+S+  +    + +FFE + T Y 
Sbjct: 283 SQMITDYIQYLGNLRCENLGFAPIYDGHKEEPQSMSWVSQYSNANLIKTDFFEAKSTAYA 342

Query: 118 QGAELKWD 125
           + + +  D
Sbjct: 343 KSSAMVDD 350


>gi|157825769|ref|YP_001493489.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia akari
           str. Hartford]
 gi|157799727|gb|ABV74981.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia akari
           str. Hartford]
          Length = 327

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH N  I +      ENP +WT+  +++           E A+       G   G
Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFEVGGIEG 248

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TEY + 
Sbjct: 249 LTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATEYSKA 308

Query: 120 A-ELKWD 125
           A    W+
Sbjct: 309 ATTGSWE 315


>gi|53713986|ref|YP_099978.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis YCH46]
 gi|52216851|dbj|BAD49444.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides
           fragilis YCH46]
          Length = 349

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T +  +    M+ E    EIA+    +     GLN
Sbjct: 221 RDENTHLWLFRNIILELKKEEPELFTPDKVKVYEEMMREGVKQEIAWGQYVIGDQIQGLN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y+ F+ N R   +G  PL++   + P    W+S+  +    + +FFE + T Y 
Sbjct: 281 RQMISDYIHFLGNLRWSSLGYTPLYEDNRKEPESMHWVSQYSNANMVKTDFFEAKSTAYA 340

Query: 118 QGAELKWD 125
           +   L+ D
Sbjct: 341 KSTALEDD 348


>gi|290957506|ref|YP_003488688.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           scabiei 87.22]
 gi|260647032|emb|CBG70131.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           scabiei 87.22]
          Length = 355

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 39/124 (31%), Positives = 73/124 (58%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  +V++ ++ E P L+ +  +Q+   ML EA   E+ +  +    G  G+N
Sbjct: 229 RDETMHMSFAFEVVDTVRKEEPELFDELLRQQVTDMLKEAVEAELQFGRDLCGDGLPGMN 288

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE R + YQ   E
Sbjct: 289 TESMRQYLECVADQRLTRLGFAPVY-GSQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 346

Query: 122 LKWD 125
              D
Sbjct: 347 GTVD 350


>gi|9633826|ref|NP_051904.1| gp015L [Rabbit fibroma virus]
 gi|6578545|gb|AAF17899.1|AF170722_17 gp015L [Rabbit fibroma virus]
          Length = 322

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     + ++  ++ EA ++E  +  + +P   +G+N
Sbjct: 198 RDEGLHCDFACLMFK-------HLNHTPSETRATDIIKEAVVIEQQFLTKALPVRLIGIN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R   ++G   +F    NPF +M E I L+ + NFFE RV++YQ+   
Sbjct: 251 CDLMCQYIEFVADRLVTELGYSKIF-SATNPFDFM-ENISLEGKTNFFEKRVSDYQRMGV 308

Query: 122 LK 123
             
Sbjct: 309 AS 310


>gi|50237508|gb|AAT71841.1| ribonucleotide reductase small chain [Rock bream iridovirus]
          Length = 312

 Score =  148 bits (374), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  Q       +  K  Q  +  ++ +A  +E A+  E +    +G+N
Sbjct: 188 RDEGLHCDFACMLFRQ-------MANKPCQDDAHEIISDAVDIETAFFREALKTPLLGMN 240

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           + S + Y+QF+A+R    +G   ++    NPF +M   I ++ + NFFE RV+EYQ+   
Sbjct: 241 SDSMKLYIQFVADRLLDALGYAKMYN-VGNPFDFMD-NISIEGKTNFFERRVSEYQRMGV 298

Query: 122 LK 123
             
Sbjct: 299 FT 300


>gi|253567022|ref|ZP_04844473.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
           3_2_5]
 gi|265764336|ref|ZP_06092904.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
           2_1_16]
 gi|15290503|gb|AAK92210.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides
           fragilis 638R]
 gi|251944146|gb|EES84655.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
           3_2_5]
 gi|263256944|gb|EEZ28290.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
           2_1_16]
 gi|301163665|emb|CBW23219.1| putative ribonucleoside-diphosphate reductase beta chain
           [Bacteroides fragilis 638R]
          Length = 349

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T +  +    M+ E    EIA+    +     GLN
Sbjct: 221 RDENTHLWLFRNIILELKKEEPELFTPDKVKVYEEMMREGVKQEIAWGQYVIGDQIQGLN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y+ F+ N R   +G  PL++   + P    W+S+  +    + +FFE + T Y 
Sbjct: 281 RQMISDYIHFLGNLRWSSLGYTPLYEDNRKEPESMHWVSQYSNANMVKTDFFEAKSTAYA 340

Query: 118 QGAELKWD 125
           +   L+ D
Sbjct: 341 KSTALEDD 348


>gi|15150459|ref|NP_150454.1| LSDV020 ribonucleotide reductase small subunit [Lumpy skin disease
           virus NI-2490]
 gi|15149031|gb|AAK84981.1| LSDV020 ribonucleotide reductase small subunit [Lumpy skin disease
           virus NI-2490]
 gi|22595554|gb|AAN02587.1| ribonucleotide reductase small subunit [Lumpy skin disease virus
           NW-LW]
          Length = 321

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K            +    +++EA  +E  +    +P   +G+N
Sbjct: 196 RDEGLHCDFACLIFKHLKY-------PPSNEIITIIINEAVSIEKEFLTNIIPVKLIGMN 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++FIA+R   ++G + +F  + NPF +M E I L+ + NFFE RV+EYQ+   
Sbjct: 249 CDLMSQYIEFIADRLLLELGCDKVF-MSTNPFDFM-ENISLEGKTNFFEKRVSEYQKMGV 306

Query: 122 LK 123
           + 
Sbjct: 307 IS 308


>gi|308490981|ref|XP_003107682.1| CRE-RNR-2 protein [Caenorhabditis remanei]
 gi|308250551|gb|EFO94503.1| CRE-RNR-2 protein [Caenorhabditis remanei]
          Length = 377

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  Q++   ++ +A  +E  +  E +P   +G+N
Sbjct: 252 RDEGLHRDFACLLYSMLQ-------NKLTQERIFEIIRDAVCIEQEFLTEALPVDMIGMN 304

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+    ++G + L+   +NPF +M E I +  + NFFE RV+EYQ+   
Sbjct: 305 CRLMSQYIEFVADHLLAELGCDKLYN-VKNPFDFM-ENISIDGKTNFFEKRVSEYQRPGV 362

Query: 122 LK 123
           + 
Sbjct: 363 MS 364


>gi|258511567|ref|YP_003185001.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478293|gb|ACV58612.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 369

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++ ++I  ENP + T + +++   M+  A   EIA+         VGL 
Sbjct: 242 RDELTHLAIFRNLYHEIIRENPGIVTPDMEEEFVEMMRTAVQHEIAWGQYVTQGKIVGLT 301

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
               + Y++++AN R   + L  L+ +  E+P PWM     +   + +FFE RVT Y + 
Sbjct: 302 DALIDAYIKYLANLRLQSLNLPILYPEIKEHPMPWMDSFAAINSHKTDFFEQRVTNYTKA 361

Query: 120 AELKWD 125
             L WD
Sbjct: 362 GNLNWD 367


>gi|9631087|ref|NP_047757.1| ribonucleotide reductase small subunit homolog [Lymantria dispar
           MNPV]
 gi|3822355|gb|AAC70306.1| ribonucleotide reductase small subunit homolog [Lymantria dispar
           MNPV]
          Length = 348

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  +    + R ++ +A  +E  +  E +P   +GLN
Sbjct: 224 RDEGLHCDFACLLFK-------HLVQRPSAARVREIVTDAVAIEQRFLTEALPVRLLGLN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             +  QY++F+A+R   ++     +  T NP  +M+ +I L+ + NFFE +V EYQ+   
Sbjct: 277 CETMSQYIEFVADRLLLELVGAKHYN-TPNPLDFMN-LISLEGKTNFFEKKVGEYQKFGV 334

Query: 122 L 122
           +
Sbjct: 335 M 335


>gi|60682187|ref|YP_212331.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis NCTC 9343]
 gi|60493621|emb|CAH08410.1| putative ribonucleoside-diphosphate reductase beta chain
           [Bacteroides fragilis NCTC 9343]
          Length = 349

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T +  +    M+ E    EIA+    +     GLN
Sbjct: 221 RDENTHLWLFRNIILELKKEEPELFTPDKVKVYEEMMREGVKQEIAWGQYVIGDQIQGLN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y+ F+ N R   +G  PL++   + P    W+S+  +    + +FFE + T Y 
Sbjct: 281 RQMISDYIHFLGNLRWSSLGYTPLYEDNRKEPESMHWVSQYSNANMVKTDFFEAKSTAYA 340

Query: 118 QGAELKWD 125
           +   L+ D
Sbjct: 341 KSTALEDD 348


>gi|168184457|ref|ZP_02619121.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum Bf]
 gi|237796249|ref|YP_002863801.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium
           botulinum Ba4 str. 657]
 gi|182672468|gb|EDT84429.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum Bf]
 gi|229263158|gb|ACQ54191.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum Ba4 str. 657]
          Length = 342

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K EN H++T+E +++ R M+      EI +         +GLN
Sbjct: 214 RDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRIGVEHEIQWGQYVTNNEILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
               E+Y+++++N R   IGL+PL+ +  ++P  W+     L   + +FFE +VT Y + 
Sbjct: 274 DELIERYIKYLSNLRLVAIGLKPLYLEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|170761039|ref|YP_001788131.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169408028|gb|ACA56439.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A3 str. Loch Maree]
          Length = 342

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K EN H++T+E +++ R M+      EI +         +GLN
Sbjct: 214 RDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRMGVEHEIQWGQYVTNNEILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
               E+Y+++++N R   IGL+PL+ +  ++P  W+     L   + +FFE +VT Y + 
Sbjct: 274 DELIERYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDGFSKLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|89890041|ref|ZP_01201552.1| ribonucleoside-diphosphate reductase small chain [Flavobacteria
           bacterium BBFL7]
 gi|89518314|gb|EAS20970.1| ribonucleoside-diphosphate reductase small chain [Flavobacteria
           bacterium BBFL7]
          Length = 330

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 68/122 (55%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F + + N       HL  K  +++   ++ +A  +E  +  E++P   +G+N
Sbjct: 199 RDEGMHCDFAVHLHNH------HLVNKVPKERITEIIVDALNIEREFITESLPASLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+ +R   ++  +P++  T NPF +M  +I ++ + NFFE RV EYQ+   
Sbjct: 253 AKLMTQYLEFVTDRLLGELECDPVYNVT-NPFDFMD-LIGMEGKTNFFEKRVGEYQKAGV 310

Query: 122 LK 123
           + 
Sbjct: 311 MN 312


>gi|225012154|ref|ZP_03702591.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
           MS024-2A]
 gi|225003709|gb|EEG41682.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
           MS024-2A]
          Length = 325

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F + + N       HL  K    + + +L +A  +E  +  E++P   +G+N
Sbjct: 198 RDEGVHCDFAVHLHNH------HLVNKVPPARIKEILLDALTIEREFITESLPISLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+ +R   ++GLE  F  T NPF +M  +I L+ + NFFE RV EYQ+   
Sbjct: 252 AKLMTQYLEFVTDRLLQELGLEKEFNVT-NPFDFMD-MISLQGKTNFFEKRVGEYQKAGV 309

Query: 122 LK 123
           L 
Sbjct: 310 LN 311


>gi|212697417|ref|ZP_03305545.1| hypothetical protein ANHYDRO_01987 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325846383|ref|ZP_08169352.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
 gi|212675609|gb|EEB35216.1| hypothetical protein ANHYDRO_01987 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325481567|gb|EGC84607.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
          Length = 352

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +IN +K E P L+T E ++   ++L E    EIA+    +     GLN
Sbjct: 224 RDENTHLWLFRSMINDLKEERPDLFTDELKEFYLSLLKEGVEQEIAWGKYAIGDEIQGLN 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
           +   E Y++++ N R   +GL  +++ Y E P    W+SE  D  + + +FFE +V+ Y 
Sbjct: 284 SQMIEDYIKYLGNLRAKGLGLGKIYEGYEEEPQSMKWVSEYSDPNQVKTDFFEGKVSAYS 343

Query: 118 QGAELKWD 125
           + + ++ D
Sbjct: 344 KSSVIEDD 351


>gi|62421216|gb|AAX82336.1| ribonucleotide reductase small chain [Orange-spotted grouper
           iridovirus]
          Length = 312

 Score =  147 bits (373), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  Q       +  K  Q  +  ++ +A  +E A+  E +    +G+N
Sbjct: 188 RDEGLHCDFACMLFRQ-------MANKPCQDDAHEIISDAVDIETAFFREALKTPLLGMN 240

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           + S + Y+QF+A+R    +G   ++    NPF +M   I ++ + NFFE RV+EYQ+   
Sbjct: 241 SDSMKLYIQFVADRLLDALGYAKMYN-VGNPFDFMD-NISIEGKTNFFERRVSEYQRMGV 298

Query: 122 LK 123
             
Sbjct: 299 FT 300


>gi|254388985|ref|ZP_05004216.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           clavuligerus ATCC 27064]
 gi|294814921|ref|ZP_06773564.1| Ribonucleoside-diphosphate reductase beta chain protein
           [Streptomyces clavuligerus ATCC 27064]
 gi|326443293|ref|ZP_08218027.1| Ribonucleoside-diphosphate reductase [Streptomyces clavuligerus
           ATCC 27064]
 gi|197702703|gb|EDY48515.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           clavuligerus ATCC 27064]
 gi|218078699|emb|CAB90708.3| class Ia ribonucleotide-diphosphate reductase small subunit chain
           [Streptomyces clavuligerus ATCC 27064]
 gi|294327520|gb|EFG09163.1| Ribonucleoside-diphosphate reductase beta chain protein
           [Streptomyces clavuligerus ATCC 27064]
          Length = 339

 Score =  147 bits (373), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 42/124 (33%), Positives = 73/124 (58%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ ++ +    G  G+N
Sbjct: 213 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLKEAVEAELQFSRDLCGDGLPGMN 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y+Q +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 273 TESMREYLQCVADQRLARLGFAPVY-GSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 330

Query: 122 LKWD 125
              D
Sbjct: 331 GSVD 334


>gi|239947951|ref|ZP_04699704.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsia
           endosymbiont of Ixodes scapularis]
 gi|239922227|gb|EER22251.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsia
           endosymbiont of Ixodes scapularis]
          Length = 327

 Score =  147 bits (373), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH N  I +     IENP +WT+  +++           E A+       G   G
Sbjct: 189 VRDETLHTNSIITLFKTFVIENPEVWTETLRKRIYEACTTIVHFEDAFIELAFEVGGIEG 248

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TEY + 
Sbjct: 249 LTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATEYSKA 308

Query: 120 A-ELKWD 125
           A    W+
Sbjct: 309 ATTGSWE 315


>gi|20069937|ref|NP_613141.1| ribonucleotide reductase small subunit [Mamestra configurata NPV-A]
 gi|20043331|gb|AAM09166.1| ribonucleotide reductase small subunit [Mamestra configurata NPV-A]
 gi|33331769|gb|AAQ11077.1| putative ribonucleotide reductase small subunit-like protein
           [Mamestra configurata NPV-A]
          Length = 313

 Score =  147 bits (373), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 8/123 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F     N    E      K   +K   M  EA  +E  +  + +P   +G+N
Sbjct: 191 RDEGMHTDFACLYYNTRVKE------KLSYEKILDMFKEAVDIEKEFFTDALPVSLLGMN 244

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    +Y++F+A+R   Q+G    +    NPF +M+  I L+ + NFFE RV EY+    
Sbjct: 245 ATMMCEYIEFVADRLLMQLGQPKYYN-ARNPFSFMN-NISLEGKTNFFERRVGEYKMFGT 302

Query: 122 LKW 124
              
Sbjct: 303 GSD 305


>gi|91215505|ref|ZP_01252476.1| probable ribonucleoside-diphosphate reductase small chain
           [Psychroflexus torquis ATCC 700755]
 gi|91186457|gb|EAS72829.1| probable ribonucleoside-diphosphate reductase small chain
           [Psychroflexus torquis ATCC 700755]
          Length = 326

 Score =  147 bits (373), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 70/122 (57%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F + + N+      HL  +  +++ R ++ +A  +E  +  E++P   +G+N
Sbjct: 198 RDEGVHCDFAVHLHNE------HLVNQVPKERIRAIIVDALTIEREFVTESLPVSLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R   ++G +  +  T NPF +M  +I L+ + NFFE RV EYQ+   
Sbjct: 252 SNLMTQYLEFVADRLLFELGCDKEY-GTANPFDFMD-MISLQGKTNFFEKRVGEYQKAGV 309

Query: 122 LK 123
           + 
Sbjct: 310 MN 311


>gi|289742419|gb|ADD19957.1| ribonucleotide reductase beta subunit [Glossina morsitans
           morsitans]
          Length = 396

 Score =  147 bits (373), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 9/124 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F + +         HL  K  +++   ++ +A  +E  +  E +P   +G+N
Sbjct: 271 RDEGLHCEFAVLMFK-------HLIQKPSKERILEIITDAVKIEKEFLTEALPVDLIGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           + S  +Y++++A+R   ++ +   +   ENPF +M++ I +  + NFFE RV EYQ+   
Sbjct: 324 SESMCKYIEYVADRLLLELDVGK-YYLAENPFEFMNK-ISIDGKTNFFEKRVGEYQKIGV 381

Query: 122 LKWD 125
              D
Sbjct: 382 SSDD 385


>gi|157964544|ref|YP_001499368.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           massiliae MTU5]
 gi|157844320|gb|ABV84821.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia
           massiliae MTU5]
          Length = 336

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH N  I +      ENP +WT+  +++           E A+       G   G
Sbjct: 190 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFEVGGIEG 249

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TEY + 
Sbjct: 250 LTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATEYSKA 309

Query: 120 A-ELKWD 125
           A    W+
Sbjct: 310 ATTGSWE 316


>gi|148380773|ref|YP_001255314.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. ATCC 3502]
 gi|153932443|ref|YP_001385057.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. ATCC 19397]
 gi|153934989|ref|YP_001388527.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. Hall]
 gi|148290257|emb|CAL84376.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           botulinum A str. ATCC 3502]
 gi|152928487|gb|ABS33987.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. ATCC 19397]
 gi|152930903|gb|ABS36402.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. Hall]
          Length = 342

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K EN H++T+E +++ R M+      EI +         +GLN
Sbjct: 214 RDEVTHLVLFQNIIKELKNENLHIFTEELEEEFRQMMRMGVEHEIQWGQYVTNNEILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
               E+Y+++++N R   IGL+PL+ +  ++P  W+     L   + +FFE +VT Y + 
Sbjct: 274 DELIEKYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|323452425|gb|EGB08299.1| hypothetical protein AURANDRAFT_59025 [Aureococcus anophagefferens]
          Length = 319

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 34/118 (28%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + ++++ +   +       +  +++  A  +E ++    +P   +G+N
Sbjct: 194 RDEGLHCDFACLLYSKLRKKLSDV-------QVASIVGAAVDIEKSFVVSALPVELIGMN 246

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           + S  +Y++F A+R   ++G   L+    NPF WM E+I L+ + NFFE RV EY + 
Sbjct: 247 SKSMCKYIEFCADRLLLELGYSTLY-GATNPFDWM-ELISLQGKTNFFEKRVGEYAKA 302


>gi|67459102|ref|YP_246726.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia felis
           URRWXCal2]
 gi|67004635|gb|AAY61561.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia felis
           URRWXCal2]
          Length = 327

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH N  I +      ENP +WT+  +++           E A+       G   G
Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFEVGGIEG 248

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TEY + 
Sbjct: 249 LTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATEYSKA 308

Query: 120 A-ELKWD 125
           A    W+
Sbjct: 309 ATTGSWE 315


>gi|325261084|ref|ZP_08127822.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
           D5]
 gi|324032538|gb|EGB93815.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
           D5]
          Length = 347

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     ++ ++K E P L+T E  +K R+M+ E    EI + H  +     GLN
Sbjct: 219 RDENTHLWLFRSILMELKKEEPWLFTAEKTEKYRSMIREGCEQEIRWGHYVIGDDIQGLN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y+Q++ N RC  + LEP+++  E       W+S+  +    + +FFE R T Y 
Sbjct: 279 REMITDYIQYLGNLRCRGLELEPVYEGHEKEPESMSWVSQFSNANMIKTDFFEARSTAYA 338

Query: 118 QGAELKWD 125
           + + L  D
Sbjct: 339 KSSALVDD 346


>gi|302558498|ref|ZP_07310840.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           griseoflavus Tu4000]
 gi|302476116|gb|EFL39209.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           griseoflavus Tu4000]
          Length = 341

 Score =  147 bits (372), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 42/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+ ++  Q+   ML EA   E+ +A +    G  G+N
Sbjct: 215 RDETMHMSFAFDVVDTVRKEEPELFDEQLGQQVTAMLREAVEAELQFARDLCGDGLPGMN 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 275 TESMRQYLECVADQRLVRLGFAPVY-GSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 332

Query: 122 LKWD 125
              D
Sbjct: 333 GTVD 336


>gi|289449785|ref|YP_003474451.1| ribonucleoside-diphosphate reductase subunit beta [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
 gi|289184332|gb|ADC90757.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
          Length = 400

 Score =  147 bits (372), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++++++++E P L++ E  ++ R M+ E    EIA+ H  +     GL 
Sbjct: 272 RDENTHLWLFRNILSELQVERPDLFSAELVEEYRAMIKEGAEQEIAWGHYVLGDDIPGLT 331

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y+Q++AN R   +G   ++      P    W+S+  D    + +FFE + T Y 
Sbjct: 332 RQMVTDYIQYLANLRAQNLGFAYIYPDNHSEPASMSWISQYSDANMVKTDFFEAKSTAYA 391

Query: 118 QGAELKWD 125
           +   +  D
Sbjct: 392 KSTAMIDD 399


>gi|260061082|ref|YP_003194162.1| putative ribonucleoside-diphosphate reductase small chain
           [Robiginitalea biformata HTCC2501]
 gi|88785214|gb|EAR16383.1| probable ribonucleoside-diphosphate reductase small chain
           [Robiginitalea biformata HTCC2501]
          Length = 328

 Score =  147 bits (372), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 67/122 (54%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H ++ + +       N HL  K  +++   ++  A  +E  +  E++P   +G+N
Sbjct: 199 RDEGMHCDYAVHL------HNNHLVNKVPKERITQIITNALDIEREFITESLPVSLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+ +R   ++  E ++  + NPF +M  +I L+ + NFFE RV+EYQ+   
Sbjct: 253 AKLMTQYLEFVTDRLLVELECEKVYN-STNPFDFMD-MISLQGKTNFFEKRVSEYQKAGV 310

Query: 122 LK 123
           + 
Sbjct: 311 MN 312


>gi|297192180|ref|ZP_06909578.1| ribonucleoside-diphosphate reductase subunit beta protein
           [Streptomyces pristinaespiralis ATCC 25486]
 gi|197720175|gb|EDY64083.1| ribonucleoside-diphosphate reductase subunit beta protein
           [Streptomyces pristinaespiralis ATCC 25486]
          Length = 340

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 40/126 (31%), Positives = 75/126 (59%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+  E +Q+   ML EA   E+ +  +   +G  G+N
Sbjct: 214 RDETMHMNFAFEVVDTVRKEEPELFDDELRQQVTDMLKEAVEAELQFGRDLCGEGLPGMN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
             S  +Y+Q +A++R  ++G  P++  ++NPF +M E+  +++  NFFE R + YQ    
Sbjct: 274 TESMREYLQCVADQRLTRLGFAPVY-GSQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 331

Query: 120 AELKWD 125
             + +D
Sbjct: 332 GSVAFD 337


>gi|9632043|ref|NP_048832.1| hypothetical protein PBCV1_A476R [Paramecium bursaria Chlorella
           virus 1]
 gi|1620147|gb|AAC96843.1| contains ribonucleotide reductase (RR) signature; similar to
           tobacco RR small subunit, corresponds to Swiss-Prot
           Accession Number P49730 [Paramecium bursaria Chlorella
           virus 1]
          Length = 324

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 70/122 (57%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  FG  + ++++ + P        +  + ++ EA   E  +  + +P   +G+N
Sbjct: 200 RDEGLHQQFGELMYSKLQNKLPF-------ETVKQIITEAVENEKEFICDAIPCRLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G E ++  ++NPF +M E+I L+ + NFFE RV++YQ+   
Sbjct: 253 AELMGQYIEFVADRIFVALGYEKVYN-SKNPFAFM-ELISLQGKTNFFEKRVSDYQRPGV 310

Query: 122 LK 123
           +K
Sbjct: 311 MK 312


>gi|323486976|ref|ZP_08092290.1| hypothetical protein HMPREF9474_04041 [Clostridium symbiosum
           WAL-14163]
 gi|323399688|gb|EGA92072.1| hypothetical protein HMPREF9474_04041 [Clostridium symbiosum
           WAL-14163]
          Length = 347

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L+++E     R M+ E    EIA+    +     GL 
Sbjct: 219 RDENTHLWLFGSIIRELQTEEPSLFSREKTDCYREMIREGCEQEIAWGCYAIGDEVPGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y++++ N RC  +G EPL+  Y   P    W+S+  +    + +FFE R T Y 
Sbjct: 279 KQMITDYIRYLGNLRCSNLGFEPLYDGYAHEPETMAWVSQYSNANMIKTDFFEARSTAYA 338

Query: 118 QGAELKWD 125
           + + L  D
Sbjct: 339 KSSALVDD 346


>gi|1710399|sp|P50649|RIR2_PLAFG RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
           AltName: Full=Ribonucleotide reductase R2 subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|349790|gb|AAA29754.1| ribonucleotide reductase R2 subunit [Plasmodium falciparum]
          Length = 322

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 37/123 (30%), Positives = 68/123 (55%), Gaps = 11/123 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEA--TLLEIAYAHETMPKGFVG 59
           RDE LH +F   + + +  + P        Q  + ++ EA    +E ++  E++P   +G
Sbjct: 195 RDEGLHTDFNCLIYSLLDNKLPE-------QMVQNIVKEAGGVEVEKSFICESLPCDLIG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +N+    QY++F+A+R    +G   +F +++NPF WM  +I L+ + NFFE RV +YQ+ 
Sbjct: 248 MNSRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWMD-LISLQGKTNFFEKRVADYQKS 305

Query: 120 AEL 122
             +
Sbjct: 306 GVM 308


>gi|78776214|ref|YP_392529.1| ribonucleotide-diphosphate reductase subunit beta [Sulfurimonas
           denitrificans DSM 1251]
 gi|78496754|gb|ABB43294.1| Ribonucleoside-diphosphate reductase [Sulfurimonas denitrificans
           DSM 1251]
          Length = 340

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+ ++ +++   M  EA  LE+A+         +GL 
Sbjct: 215 RDEVTHLVLFQNLINSLRKERPDLFNEKLKEEVIEMFKEAVALEVAWGKYITGGQILGLT 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120
               EQY+Q++A+ R   +G   L+  T NP  W+ +       + NFFE  V  Y +G+
Sbjct: 275 DAIIEQYIQYLADDRLTSVGFAKLYNVT-NPIKWVDDFSKFNDQKTNFFEGTVANYSKGS 333

Query: 121 ELKWD 125
            L +D
Sbjct: 334 -LTFD 337


>gi|328884923|emb|CCA58162.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Streptomyces venezuelae ATCC 10712]
          Length = 338

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 41/124 (33%), Positives = 72/124 (58%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+    +Q+   ML EA   E+ +  +    G  G+N
Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPELFDDALRQQVTDMLKEAVEAELQFGRDLCGDGLPGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y+Q +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 272 TESMREYLQCVADQRLQRLGFAPVY-GSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329

Query: 122 LKWD 125
              D
Sbjct: 330 GSVD 333


>gi|253827828|ref|ZP_04870713.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter
           canadensis MIT 98-5491]
 gi|313142391|ref|ZP_07804584.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           canadensis MIT 98-5491]
 gi|253511234|gb|EES89893.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter
           canadensis MIT 98-5491]
 gi|313131422|gb|EFR49039.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           canadensis MIT 98-5491]
          Length = 341

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 69/125 (55%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN +K E+P L+TK+ +++   M  EA  +E A+         +GL 
Sbjct: 217 RDEVTHLILFQNMINSVKKESPELFTKDLEEEVIEMFREAVKVETAWGEYITQGQILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120
           +   ++Y++++A+ R  +IGL  L+   ++P  W+       + + NFFE  VT Y +G+
Sbjct: 277 SEIIQEYIKYLADERLRRIGLPTLYN-AKHPIKWVDSFSSFNEQKTNFFEGNVTNYAKGS 335

Query: 121 ELKWD 125
            + +D
Sbjct: 336 -INFD 339


>gi|218289144|ref|ZP_03493380.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218240727|gb|EED07906.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 345

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++ ++I  ENP + T + +++   M+  A   EIA+         VGL 
Sbjct: 218 RDELTHLAIFRNLYHEIVRENPGIVTPDMEEEFVEMMRTAVQHEIAWGQYVTQGKIVGLT 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
               + Y++++AN R   + L  L+ +  E+P PWM     +   + +FFE RVT Y + 
Sbjct: 278 DALIDAYIKYLANLRLQSLNLPILYPEIKEHPMPWMDSFAAINSHKTDFFEQRVTNYTKA 337

Query: 120 AELKWD 125
             L WD
Sbjct: 338 GNLNWD 343


>gi|225434341|ref|XP_002276454.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 841

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           R E LH +F   + + ++ + P        QK   ++HEA  +E  +  E +P   +G+ 
Sbjct: 713 RYEGLHCDFACLLYSLLQKQLPW-------QKVHHIVHEAMEIETQFICEALPCALIGMK 765

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A     Y++F+ +R    +G E  +   ENPF WM E I L+   NFF+ R+ +YQ+ + 
Sbjct: 766 ATLMSHYIKFVVDRLLVALGYERKYN-VENPFDWM-EFIFLQGNANFFQRRMGDYQKASI 823

Query: 122 LK 123
           + 
Sbjct: 824 MS 825


>gi|224418874|ref|ZP_03656880.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           canadensis MIT 98-5491]
          Length = 340

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 69/125 (55%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN +K E+P L+TK+ +++   M  EA  +E A+         +GL 
Sbjct: 216 RDEVTHLILFQNMINSVKKESPELFTKDLEEEVIEMFREAVKVETAWGEYITQGQILGLT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120
           +   ++Y++++A+ R  +IGL  L+   ++P  W+       + + NFFE  VT Y +G+
Sbjct: 276 SEIIQEYIKYLADERLRRIGLPTLYN-AKHPIKWVDSFSSFNEQKTNFFEGNVTNYAKGS 334

Query: 121 ELKWD 125
            + +D
Sbjct: 335 -INFD 338


>gi|239929012|ref|ZP_04685965.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           ghanaensis ATCC 14672]
          Length = 339

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 41/124 (33%), Positives = 73/124 (58%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+ +   Q+   ML EA   E+ +A +    G  G+N
Sbjct: 213 RDETMHMSFAFDVVDTVRKEEPELFDERLGQQVTDMLREAVEAELQFARDLCGDGLPGMN 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE R + YQ   E
Sbjct: 273 TESMRQYLECVADQRLTRLGFAPVY-GSQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 330

Query: 122 LKWD 125
              D
Sbjct: 331 GTVD 334


>gi|15617531|ref|NP_258331.1| RR2B [Spodoptera litura NPV]
 gi|15553267|gb|AAL01745.1|AF325155_57 ribonucleotide reductase small subunit homolog [Spodoptera litura
           NPV]
          Length = 333

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       H+  K  + +   ++ EA  +E  +  E +P   +G+N
Sbjct: 206 RDEGLHTDFACLMYS-------HIVNKPTRDRILDIITEAVAIENEFVTEALPVAMLGMN 258

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                +Y++F+A+R   ++  E  +  T+NPF +M+ +I L+ + NFFE +V+EYQ+   
Sbjct: 259 NDLMSKYIEFVADRLLLELIGERHYN-TKNPFDFMN-LISLEGKTNFFEKKVSEYQKYGV 316

Query: 122 LK 123
           + 
Sbjct: 317 MS 318


>gi|323692021|ref|ZP_08106269.1| ribonucleoside-diphosphate reductase [Clostridium symbiosum
           WAL-14673]
 gi|323503944|gb|EGB19758.1| ribonucleoside-diphosphate reductase [Clostridium symbiosum
           WAL-14673]
          Length = 347

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L+++E     R M+ E    EIA+    +     GL 
Sbjct: 219 RDENTHLWLFGSIIRELQTEEPSLFSREKTDCYREMIREGCEQEIAWGCYAIGDEVPGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y++++ N RC  +G EPL+  Y   P    W+S+  +    + +FFE R T Y 
Sbjct: 279 KQMITDYIRYLGNLRCSNLGFEPLYDGYVHEPETMAWVSQYSNANMIKTDFFEARSTAYA 338

Query: 118 QGAELKWD 125
           + + L  D
Sbjct: 339 KSSALVDD 346


>gi|154505112|ref|ZP_02041850.1| hypothetical protein RUMGNA_02625 [Ruminococcus gnavus ATCC 29149]
 gi|153794591|gb|EDN77011.1| hypothetical protein RUMGNA_02625 [Ruminococcus gnavus ATCC 29149]
          Length = 347

 Score =  147 bits (372), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T E  +  + ML E    EIA+ H  +     GL 
Sbjct: 219 RDENTHLWLFRNMILEMKKELPELFTPEHIEILKEMLKEGVRQEIAWGHYVIGNQIAGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKY-TENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
                +Y+Q++ N R   +G +P++   T+ P    W+S+  +    + +FFE + T Y 
Sbjct: 279 KEMITEYIQYLGNLRFTNLGFDPIYPDQTQEPDSMRWVSQYSNANMVKTDFFEAKSTAYA 338

Query: 118 QGAELKWD 125
           +   L  D
Sbjct: 339 KSTALIDD 346


>gi|308485547|ref|XP_003104972.1| hypothetical protein CRE_24501 [Caenorhabditis remanei]
 gi|308257293|gb|EFP01246.1| hypothetical protein CRE_24501 [Caenorhabditis remanei]
          Length = 323

 Score =  147 bits (371), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 9/123 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  +I         K  ++    ++ EA  +E+ +  + +P   +G+N
Sbjct: 198 RDEGLHRDFACLLFTKI-------VDKPSREIVCEIVDEAVTIELEFLDQALPVNVIGMN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++++A+    ++G E L+ +T NPF +M E I +  + NFFE RV+EYQ+   
Sbjct: 251 YTLMSQYIKYVADHLLEELGFEKLY-HTINPFDFM-ENISIDGKTNFFEKRVSEYQRSGV 308

Query: 122 LKW 124
           +  
Sbjct: 309 MAD 311


>gi|31322342|gb|AAP15464.1| ribonucleotide reductase small subunit [Rickettsia rickettsii str.
           'Sheila Smith']
          Length = 336

 Score =  147 bits (371), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH N  I +      ENP +WT+  +++           E A+       G   G
Sbjct: 197 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFEVGGIEG 256

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TEY + 
Sbjct: 257 LTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRTTEYSKA 316

Query: 120 A-ELKWD 125
           A    W+
Sbjct: 317 ATTGSWE 323


>gi|153814165|ref|ZP_01966833.1| hypothetical protein RUMTOR_00374 [Ruminococcus torques ATCC 27756]
 gi|317499963|ref|ZP_07958199.1| ribonucleoside-diphosphate reductase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331087814|ref|ZP_08336739.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 3_1_46FAA]
 gi|145848561|gb|EDK25479.1| hypothetical protein RUMTOR_00374 [Ruminococcus torques ATCC 27756]
 gi|316898680|gb|EFV20715.1| ribonucleoside-diphosphate reductase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330409509|gb|EGG88950.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 3_1_46FAA]
          Length = 353

 Score =  147 bits (371), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ E+P L+      + + +L EA   EI +A   +     GLN
Sbjct: 225 RDENTHLWLFRNIIIELRKEHPELFDDHMVSEMKELLMEAVRQEIEWACYVIGNEVPGLN 284

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y++++ N R   +G  P++   E       W+S+  +    + +FFE R T Y 
Sbjct: 285 EKMITDYIRYLGNLRWKSLGYAPIYPGCEREPETMKWVSQYSNANMVKTDFFEARSTAYA 344

Query: 118 QGAELKWD 125
           +   L  D
Sbjct: 345 KSTALIDD 352


>gi|297202281|ref|ZP_06919678.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sviceus ATCC 29083]
 gi|197710199|gb|EDY54233.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sviceus ATCC 29083]
          Length = 340

 Score =  147 bits (371), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 43/124 (34%), Positives = 73/124 (58%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+    QQ+   ML EA   E+ +A +    G  G+N
Sbjct: 214 RDETMHMSFAFDVVDTVRKEEPELFDDRLQQQVTDMLAEAVEAELQFARDLCGDGLPGMN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 274 TESMRQYLECVADQRLTRLGFAPVY-GSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 331

Query: 122 LKWD 125
              D
Sbjct: 332 GTVD 335


>gi|291437353|ref|ZP_06576743.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           ghanaensis ATCC 14672]
 gi|291340248|gb|EFE67204.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           ghanaensis ATCC 14672]
          Length = 340

 Score =  147 bits (371), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 41/124 (33%), Positives = 73/124 (58%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+ +   Q+   ML EA   E+ +A +    G  G+N
Sbjct: 214 RDETMHMSFAFDVVDTVRKEEPELFDERLGQQVTDMLREAVEAELQFARDLCGDGLPGMN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE R + YQ   E
Sbjct: 274 TESMRQYLECVADQRLTRLGFAPVY-GSQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 331

Query: 122 LKWD 125
              D
Sbjct: 332 GTVD 335


>gi|88607783|ref|YP_505152.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           phagocytophilum HZ]
 gi|88598846|gb|ABD44316.1| ribonucleoside-diphosphate reductase, beta subunit [Anaplasma
           phagocytophilum HZ]
          Length = 323

 Score =  147 bits (371), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 47/126 (37%), Positives = 70/126 (55%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60
           RDESLH +  I + N    EN  +W  + +Q+         +LE  +       G   GL
Sbjct: 193 RDESLHTDSIIRLFNTFVHENGEIWDDDLKQELYDACKVIVMLEDEFIDLAFALGDVEGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A   ++Y++FIANRR  Q+ LEP++   ENP PW+ E+++  +  NFFE RVTEY + A
Sbjct: 253 SACEVKRYIRFIANRRLKQLHLEPIYDVAENPLPWLDEILNGVEHTNFFENRVTEYARAA 312

Query: 121 -ELKWD 125
            E  W+
Sbjct: 313 TEGTWE 318


>gi|237752265|ref|ZP_04582745.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           winghamensis ATCC BAA-430]
 gi|229376507|gb|EEO26598.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           winghamensis ATCC BAA-430]
          Length = 343

 Score =  147 bits (371), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E PHL+TK+  ++   M  EA  +E  +         +GL 
Sbjct: 219 RDEVTHLLLFQNMINSLRKEMPHLFTKDLIEEVLEMFREAVRVESTWGEYITQGQILGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120
           +    +Y++++A+ R  ++GL  L+    +P  W+       + + NFFE  VT Y +G+
Sbjct: 279 SEIIHEYIRYLADNRLTRVGLPALYN-ARHPIKWVDSFSSFNEQKTNFFEGNVTNYAKGS 337

Query: 121 ELKWD 125
            + +D
Sbjct: 338 -INFD 341


>gi|305665630|ref|YP_003861917.1| putative ribonucleoside-diphosphate reductase small chain
           [Maribacter sp. HTCC2170]
 gi|88710386|gb|EAR02618.1| probable ribonucleoside-diphosphate reductase small chain
           [Maribacter sp. HTCC2170]
          Length = 328

 Score =  147 bits (371), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 33/124 (26%), Positives = 68/124 (54%), Gaps = 8/124 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H ++ + +         H+  K  +++   ++ +A  +E  +  E++P   +G+N
Sbjct: 199 RDEGMHCDYAVHLHKN------HIVNKVTKERITDIIVDALNIEREFITESLPVSLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+ +R   ++  + ++  + NPF +M  +I L+ + NFFE RV+EYQ+   
Sbjct: 253 SKLMTQYLEFVTDRLLVELECDKVYN-SSNPFDFMD-MISLQGKTNFFEKRVSEYQKAGV 310

Query: 122 LKWD 125
           L  D
Sbjct: 311 LNKD 314


>gi|320527966|ref|ZP_08029132.1| ribonucleoside-diphosphate reductase, beta subunit [Solobacterium
           moorei F0204]
 gi|320131592|gb|EFW24156.1| ribonucleoside-diphosphate reductase, beta subunit [Solobacterium
           moorei F0204]
          Length = 349

 Score =  147 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES HL    +++ +++ E P L+T E  Q  R M++     EIA+ H  +     GLN
Sbjct: 221 RDESTHLWLFRNILVELQKEEPELFTPENIQMIREMMNTGVEQEIAWGHYVIGDEIPGLN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y++++ N R   +G   L+ +Y E P    W+ +  D    + +FFE R + Y 
Sbjct: 281 KQMVTDYIKYLGNTRFATLGFGNLYEEYAEEPESMKWVKQYSDANMVKTDFFEARPSAYA 340

Query: 118 QGAELKWD 125
           +   ++ D
Sbjct: 341 KSGAIEDD 348


>gi|154250961|ref|YP_001411785.1| ribonucleotide-diphosphate reductase subunit beta [Parvibaculum
           lavamentivorans DS-1]
 gi|154154911|gb|ABS62128.1| Ribonucleoside-diphosphate reductase [Parvibaculum lavamentivorans
           DS-1]
          Length = 319

 Score =  147 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60
           RDE+LH    + +      ENP +WT+E ++            E A+       G   GL
Sbjct: 190 RDETLHTVSAMKLFRTFVDENPEIWTEELRRDIYKACETIIHHEDAFIDLAFEMGSIEGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A   + Y+++IA+RR  Q+ L+P+++  +NP PWM E+++  +  NFFE R TEY + +
Sbjct: 250 SAQEVKNYIRYIADRRLVQLNLQPIYRTEKNPLPWMDEMLNGIEHTNFFENRATEYSKAS 309

Query: 121 E-LKWD 125
               W+
Sbjct: 310 TRGSWE 315


>gi|332519182|ref|ZP_08395649.1| Ribonucleoside-diphosphate reductase [Lacinutrix algicola 5H-3-7-4]
 gi|332045030|gb|EGI81223.1| Ribonucleoside-diphosphate reductase [Lacinutrix algicola 5H-3-7-4]
          Length = 327

 Score =  147 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F + +         HL  K  +++ R +L +A  +E  +  E++P   +G+N
Sbjct: 199 RDEGMHCDFAVHL------HEHHLINKVPKERIREILVDALNIEREFITESLPVSLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+ +     +G E  +  T NPF +M  +I L+ + NFFE RV+EYQ+   
Sbjct: 253 SKLMSQYLEFVTDGLLQDLGCEKEY-GTANPFDFMD-MISLQGKTNFFEKRVSEYQKAGV 310

Query: 122 LK 123
           L 
Sbjct: 311 LN 312


>gi|34482564|emb|CAE09564.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN [Wolinella
           succinogenes]
          Length = 283

 Score =  147 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN +K E P L+TK  +++   M  +A  +E A+         +GL 
Sbjct: 159 RDEVTHLLIFQNMINALKKERPDLFTKSLEEEVVEMFRKAVAVESAWGDYITQGQILGLT 218

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120
           +    +Y+Q++A+ R  ++G+  L+   ++P  W+ +     + + NFFE  VT Y +G+
Sbjct: 219 SEIIHEYIQYLADDRLKRVGMPILYN-AKHPIKWVDQFSSFNEQKTNFFEGNVTNYAKGS 277

Query: 121 ELKWD 125
            + +D
Sbjct: 278 -INFD 281


>gi|15604372|ref|NP_220888.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           prowazekii str. Madrid E]
 gi|51473694|ref|YP_067451.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia typhi
           str. Wilmington]
 gi|3861064|emb|CAA14964.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN (nrdB) [Rickettsia
           prowazekii]
 gi|51460006|gb|AAU03969.1| Ribonucleotide reductase [Rickettsia typhi str. Wilmington]
 gi|292572126|gb|ADE30041.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia
           prowazekii Rp22]
          Length = 324

 Score =  147 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH N  I +      ENP +WT+  +++           E A+       G   G
Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFEVGGIEG 248

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TEY + 
Sbjct: 249 LTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATEYSKA 308

Query: 120 A-ELKWD 125
           A    W+
Sbjct: 309 ATTGSWE 315


>gi|58700135|ref|ZP_00374651.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila ananassae]
 gi|58533347|gb|EAL57830.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila ananassae]
          Length = 225

 Score =  147 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 43/120 (35%), Positives = 66/120 (55%), Gaps = 1/120 (0%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60
           RDE+LH N  I + N    EN  +W  EF+++  +       LE  +       G   GL
Sbjct: 105 RDETLHTNSIIMLFNTFIKENNEIWDNEFKEELYSACRTIVELEDEFIKLAFDLGDVEGL 164

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A     Y++++ANRR  Q+GLE ++   +NP PW+ E+++  +  NFFE RVTEY + A
Sbjct: 165 SAEEVRNYIRYVANRRLMQLGLESIYDVNDNPIPWLDEILNGVEHTNFFENRVTEYSRAA 224


>gi|156839886|ref|XP_001643629.1| hypothetical protein Kpol_478p6 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114248|gb|EDO15771.1| hypothetical protein Kpol_478p6 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 394

 Score =  147 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 41/121 (33%), Positives = 63/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K        ++ EA  +E  Y  + +P   +G+N
Sbjct: 264 RDEGLHTDFASLLFS-------HLDNKPDPAIVEKIVTEAVEIEKRYFIDALPVALLGMN 316

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R     G E  +K  ENPF +M E I L  + NFFE RV++YQ+ + 
Sbjct: 317 AKLMNQYVEFVADRLLVSFGNEKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKASV 374

Query: 122 L 122
           +
Sbjct: 375 I 375


>gi|117928932|ref|YP_873483.1| ribonucleoside-diphosphate reductase [Acidothermus cellulolyticus
           11B]
 gi|117649395|gb|ABK53497.1| Ribonucleoside-diphosphate reductase [Acidothermus cellulolyticus
           11B]
          Length = 348

 Score =  147 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 48/126 (38%), Positives = 78/126 (61%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F  DVI+ ++ E P L+  E  +++R ML EA   E  +A + + +G  G++
Sbjct: 222 RDESMHMAFAFDVIDTVRREEPELFDDELARQAREMLAEAVDCETQFAEDLLGQGVPGMS 281

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ--QG 119
                 Y++ +A+RRC Q+GLEP++  + NPF +M E+ D+++  NFFE RV  YQ    
Sbjct: 282 LADMRSYLEHVADRRCVQLGLEPIY-GSPNPFTFM-ELQDVQELSNFFERRVAAYQIGVS 339

Query: 120 AELKWD 125
            E+ +D
Sbjct: 340 GEVAFD 345


>gi|320008647|gb|ADW03497.1| Ribonucleoside-diphosphate reductase [Streptomyces flavogriseus
           ATCC 33331]
          Length = 338

 Score =  147 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 41/126 (32%), Positives = 73/126 (57%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+  E +Q+   ML EA   E+ +  +    G  G+N
Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPDLFDDELRQQVTDMLKEAVEAELQFGRDLCGDGLPGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
             S  QY++ +A++R  ++G   L+  +ENPF +M E+  +++  NFFE R + YQ    
Sbjct: 272 TESMRQYLECVADQRLTRLGFPALY-GSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329

Query: 120 AELKWD 125
             + +D
Sbjct: 330 GSVGFD 335


>gi|292397811|ref|YP_003517877.1| RR2b [Lymantria xylina MNPV]
 gi|291065528|gb|ADD73846.1| RR2b [Lymantria xylina MNPV]
          Length = 338

 Score =  146 bits (370), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  +    + R ++ +A  +E  +  E +P   +GLN
Sbjct: 214 RDEGLHCDFACLMFK-------HLVQRPSAARVREIVTDAVAIEQRFLTEALPVRLLGLN 266

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             +  QY++F+A+R    +     +  T NP  +M+ +I L+ + NFFE +V EYQ+   
Sbjct: 267 CETMSQYIEFVADRLLVDLIGTKHYN-TANPLDFMT-LISLEGKTNFFEKKVGEYQKFGV 324

Query: 122 L 122
           +
Sbjct: 325 M 325


>gi|15892574|ref|NP_360288.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           conorii str. Malish 7]
 gi|34580440|ref|ZP_00141920.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia
           sibirica 246]
 gi|157828524|ref|YP_001494766.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           rickettsii str. 'Sheila Smith']
 gi|165933242|ref|YP_001650031.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           rickettsii str. Iowa]
 gi|229586746|ref|YP_002845247.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           africae ESF-5]
 gi|238650260|ref|YP_002916112.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           peacockii str. Rustic]
 gi|15619738|gb|AAL03189.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia conorii
           str. Malish 7]
 gi|28261825|gb|EAA25329.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia
           sibirica 246]
 gi|157801005|gb|ABV76258.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           rickettsii str. 'Sheila Smith']
 gi|165908329|gb|ABY72625.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia
           rickettsii str. Iowa]
 gi|228021796|gb|ACP53504.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia africae
           ESF-5]
 gi|238624358|gb|ACR47064.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           peacockii str. Rustic]
          Length = 328

 Score =  146 bits (370), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH N  I +      ENP +WT+  +++           E A+       G   G
Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFEVGGIEG 248

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TEY + 
Sbjct: 249 LTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRTTEYSKA 308

Query: 120 A-ELKWD 125
           A    W+
Sbjct: 309 ATTGSWE 315


>gi|254517517|ref|ZP_05129573.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium sp.
           7_2_43FAA]
 gi|226911266|gb|EEH96467.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium sp.
           7_2_43FAA]
          Length = 344

 Score =  146 bits (370), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 66/126 (52%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ ++++E P ++T E + + + M+  A   EI++ +  +     G+N
Sbjct: 218 RDENTHLWLFRNILKELQLEQPEIFTDEVKNQLKEMMKTAVEHEISWGNYVIGDNIQGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
                 Y++++ N R   IGL+ +++ +  NP  W+  + D    + +FFE + T Y + 
Sbjct: 278 KNLINDYIKYLGNLRMKAIGLDAIYEGHDNNPAAWVDILSDANSVKTDFFEAKSTAYAKA 337

Query: 120 AELKWD 125
             L  D
Sbjct: 338 GALIDD 343


>gi|224539244|ref|ZP_03679783.1| hypothetical protein BACCELL_04146 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519126|gb|EEF88231.1| hypothetical protein BACCELL_04146 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 349

 Score =  146 bits (370), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I ++K E P L+T +  Q    M+ E    EI +    +     GLN
Sbjct: 221 RDENTHLWLFRSIILELKKEEPELFTPDKVQIYENMMREGVKQEIEWGQYVIGDNIQGLN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y+ ++ N R   +G  PL+++  + P    W+ +  +    + +FFE + T Y 
Sbjct: 281 RQMIADYIHYLGNLRWSSLGNPPLYEHNRKEPESMHWVLQYSNANMVKTDFFEAKSTAYA 340

Query: 118 QGAELKWD 125
           +   L+ D
Sbjct: 341 KSTALEDD 348


>gi|150005609|ref|YP_001300353.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           vulgatus ATCC 8482]
 gi|254884474|ref|ZP_05257184.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           4_3_47FAA]
 gi|294778581|ref|ZP_06744003.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides
           vulgatus PC510]
 gi|319640834|ref|ZP_07995547.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
           3_1_40A]
 gi|149934033|gb|ABR40731.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides
           vulgatus ATCC 8482]
 gi|254837267|gb|EET17576.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           4_3_47FAA]
 gi|294447530|gb|EFG16108.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides
           vulgatus PC510]
 gi|317387646|gb|EFV68512.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
           3_1_40A]
          Length = 349

 Score =  146 bits (370), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T +  +    M+ E    EI +    +     GLN
Sbjct: 221 RDENTHLWLFRNIILELKKEEPDLFTPDKVKIYEYMMREGVKQEIEWGQYVIGDNIQGLN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
               E Y+Q++ N R   +G  PL++   + P    W+S+  +    + +FFE + T Y 
Sbjct: 281 RKMIEDYIQYLGNLRWSSLGFGPLYEENHKEPESMHWVSQYSNANMVKTDFFEAKSTAYA 340

Query: 118 QGAELKWD 125
           +   L+ D
Sbjct: 341 KSTALEDD 348


>gi|152993970|ref|YP_001359691.1| ribonucleotide-diphosphate reductase subunit beta [Sulfurovum sp.
           NBC37-1]
 gi|151425831|dbj|BAF73334.1| ribonucleoside-diphosphate reductase, beta subunit [Sulfurovum sp.
           NBC37-1]
          Length = 339

 Score =  146 bits (370), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN  K E P L+TKE       M  +A  LE  +         +GL 
Sbjct: 215 RDEVTHLLLFQNMINATKRERPELFTKELIDDVYQMFRDAVKLECEWGTYITQGQILGLT 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120
               EQY+Q++A++R H +GLE ++   E+P  W+         + NFFE  VT Y +G+
Sbjct: 275 NEIIEQYIQYLADKRLHAVGLEKIYN-VEHPIKWVDNFSQFNDQKTNFFEGNVTNYSKGS 333


>gi|255008714|ref|ZP_05280840.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis 3_1_12]
 gi|313146449|ref|ZP_07808642.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis 3_1_12]
 gi|313135216|gb|EFR52576.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis 3_1_12]
          Length = 349

 Score =  146 bits (370), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T +  +    M+ E    EI +    +     GLN
Sbjct: 221 RDENTHLWLFRNIILELKKEEPELFTSDRVKVYEAMMREGVKQEIEWGQYVIGDEIQGLN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
               E Y+ ++ N R   +G  PL++   + P    W+S+  +    + +FFE + T Y 
Sbjct: 281 KKMIEDYIHYLGNLRWTSLGFTPLYEDNLKEPESMRWVSQYSNANMVKTDFFEAKSTAYA 340

Query: 118 QGAELKWD 125
           +   L+ D
Sbjct: 341 KSTALEDD 348


>gi|161760549|ref|NP_906664.2| ribonucleotide-diphosphate reductase subunit beta [Wolinella
           succinogenes DSM 1740]
          Length = 341

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN +K E P L+TK  +++   M  +A  +E A+         +GL 
Sbjct: 217 RDEVTHLLIFQNMINALKKERPDLFTKSLEEEVVEMFRKAVAVESAWGDYITQGQILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120
           +    +Y+Q++A+ R  ++G+  L+   ++P  W+ +     + + NFFE  VT Y +G+
Sbjct: 277 SEIIHEYIQYLADDRLKRVGMPILYN-AKHPIKWVDQFSSFNEQKTNFFEGNVTNYAKGS 335

Query: 121 ELKWD 125
            + +D
Sbjct: 336 -INFD 339


>gi|99036000|ref|ZP_01315041.1| hypothetical protein Wendoof_01000112 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 329

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 44/126 (34%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60
           RDE+LH N  I + N    EN  +W  EF+++  +       LE  +       G   GL
Sbjct: 193 RDETLHTNSIIMLFNTFIKENNEIWDNEFKEELYSACRTIVELEDEFIKLAFDLGDVEGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A     Y++++ANRR  Q+GLE ++   +NP PW+ E+++  +  NFFE RVTEY + A
Sbjct: 253 SAEEVRNYIRYVANRRLMQLGLESIYDVNDNPTPWLDEILNGVEHTNFFENRVTEYSRAA 312

Query: 121 -ELKWD 125
            +  W+
Sbjct: 313 TQGTWE 318


>gi|254384639|ref|ZP_04999978.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces sp.
           Mg1]
 gi|194343523|gb|EDX24489.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces sp.
           Mg1]
          Length = 338

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ +  +    G  G+N
Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLKEAVDAELQFGRDLCGDGLPGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE R + YQ   E
Sbjct: 272 TESMREYLECVADQRLVRLGFAPVY-GSQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329

Query: 122 LKWD 125
              D
Sbjct: 330 GTVD 333


>gi|302542646|ref|ZP_07294988.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302460264|gb|EFL23357.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           himastatinicus ATCC 53653]
          Length = 343

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 41/126 (32%), Positives = 73/126 (57%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F   V++ ++ E P L+  + +++   ML EA   E+ +AH+    G  G+N
Sbjct: 217 RDESMHMEFAFSVVDTVREEEPDLFDDDLERQVTDMLKEAVEAELQFAHDLCGDGLPGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
             S   Y++ +A++R  ++G   +F  +ENPF +M E+ D+++  NFFE R + YQ    
Sbjct: 277 TESMRAYLECVADQRLARLGFPAVF-GSENPFSFM-ELQDVQELTNFFERRASAYQVAVE 334

Query: 120 AELKWD 125
             + +D
Sbjct: 335 GSVSFD 340


>gi|262277047|ref|ZP_06054840.1| ribonucleoside-diphosphate reductase, beta subunit [alpha
           proteobacterium HIMB114]
 gi|262224150|gb|EEY74609.1| ribonucleoside-diphosphate reductase, beta subunit [alpha
           proteobacterium HIMB114]
          Length = 342

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 1/122 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH N  I + N    ENP L  +  +++           E A+       G   G
Sbjct: 209 VRDETLHCNSMIKIFNTFCAENPGLLDESLKKEITDACRTIVEHEDAFIDLAFEMGPIEG 268

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A   + Y+++IANRR  Q+ L+ ++   ENP  W+  +++  +  NFFE R TEY + 
Sbjct: 269 LTAQQIKDYIRWIANRRLVQLKLDEIYDVKENPLEWIDTMLNGVEHMNFFEGRATEYSKA 328

Query: 120 AE 121
           + 
Sbjct: 329 ST 330


>gi|157803769|ref|YP_001492318.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           canadensis str. McKiel]
 gi|157785032|gb|ABV73533.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           canadensis str. McKiel]
          Length = 324

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH N  I +      ENP +WT+  +++           E A+       G   G
Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYGACTTIVHFEDAFIELAFEVGGIEG 248

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TEY + 
Sbjct: 249 LTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATEYSKA 308

Query: 120 A-ELKWD 125
           A    W+
Sbjct: 309 ATTGSWE 315


>gi|157953769|ref|YP_001498660.1| hypothetical protein AR158_C579R [Paramecium bursaria Chlorella
           virus AR158]
 gi|156068417|gb|ABU44124.1| hypothetical protein AR158_C579R [Paramecium bursaria Chlorella
           virus AR158]
          Length = 324

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 70/122 (57%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  FG  + ++++ + P        +  + ++ EA   E  +  + +P   +G+N
Sbjct: 200 RDEGLHQQFGELMYSKLQNKLPF-------ETVKQIITEAVENEKEFICDAIPCRLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G E ++  ++NPF +M E+I L+ + NFFE RV++YQ+   
Sbjct: 253 SELMGQYIEFVADRIFIALGYEKVYN-SKNPFAFM-ELISLQGKTNFFEKRVSDYQRPGV 310

Query: 122 LK 123
           +K
Sbjct: 311 MK 312


>gi|238061574|ref|ZP_04606283.1| ribonucleoside-diphosphate reductase [Micromonospora sp. ATCC
           39149]
 gi|237883385|gb|EEP72213.1| ribonucleoside-diphosphate reductase [Micromonospora sp. ATCC
           39149]
          Length = 344

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F  DV++ ++ E P L+  E  ++ R ML EA   E  +A + + +G  GL+
Sbjct: 218 RDESMHMAFAFDVVDTVRHEEPDLFDDELARQVREMLAEAVECEAQFAEDLLEQGVSGLS 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
                QY+Q +A+RR  Q+G+ PL+    NPF +M E+ D+++  NFFE RV+ YQ G  
Sbjct: 278 LDDMRQYLQHVADRRLAQLGIAPLYGSA-NPFAFM-ELQDVQELSNFFERRVSAYQVGVT 335

Query: 120 AELKWD 125
             + +D
Sbjct: 336 GSVTFD 341


>gi|212693366|ref|ZP_03301494.1| hypothetical protein BACDOR_02879 [Bacteroides dorei DSM 17855]
 gi|237710423|ref|ZP_04540904.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           9_1_42FAA]
 gi|237726931|ref|ZP_04557412.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           D4]
 gi|212664010|gb|EEB24584.1| hypothetical protein BACDOR_02879 [Bacteroides dorei DSM 17855]
 gi|229433787|gb|EEO43864.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           dorei 5_1_36/D4]
 gi|229455145|gb|EEO60866.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           9_1_42FAA]
          Length = 349

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T +  +    M+ E    EI +    +     GLN
Sbjct: 221 RDENTHLWLFRNIILELKKEEPDLFTPDKVKIYEYMMREGVKQEIEWGQYVIGDNIQGLN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
               E Y+Q++ N R   +G  PL++   + P    W+S+  +    + +FFE + T Y 
Sbjct: 281 RKMIEDYIQYLGNLRWSSLGFGPLYEENHKEPESMHWVSQYSNANMVKTDFFEAKSTAYA 340

Query: 118 QGAELKWD 125
           +   L+ D
Sbjct: 341 KSTALEDD 348


>gi|194755279|ref|XP_001959919.1| GF11796 [Drosophila ananassae]
 gi|190621217|gb|EDV36741.1| GF11796 [Drosophila ananassae]
          Length = 393

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 36/120 (30%), Positives = 66/120 (55%), Gaps = 9/120 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +         HL  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHCDFAVLMFQ-------HLVQKPRRERIIEIIRDAVDIEQEFLTDALPVNLIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFFE +V EYQ+   
Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVGEYQRMGV 378


>gi|42525851|ref|NP_970949.1| ribonucleotide-diphosphate reductase subunit beta [Treponema
           denticola ATCC 35405]
 gi|41815901|gb|AAS10830.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           denticola ATCC 35405]
          Length = 351

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L+T +  +  R M+ E    EIA+    +     GLN
Sbjct: 223 RDENTHLWLFRSMIQELQKEEPQLFTPQNVELFRAMIKEGCEQEIAWGDYVIGNDIPGLN 282

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
           +     Y+Q++ N RC  +G  P++  + E P    W S+  +    + +FFE + T Y 
Sbjct: 283 SQMITDYIQYLGNLRCENLGFAPIYDGHREEPQSMSWASQYSNANLIKTDFFEAKSTAYA 342

Query: 118 QGAELKWD 125
           + + +  D
Sbjct: 343 KSSAMVDD 350


>gi|319902178|ref|YP_004161906.1| ribonucleotide reductase [Bacteroides helcogenes P 36-108]
 gi|319417209|gb|ADV44320.1| ribonucleotide reductase [Bacteroides helcogenes P 36-108]
          Length = 347

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+  +  +    M+ E    EIA+    +     GL+
Sbjct: 219 RDENTHLWLFRNIILELKKEEPELFVPDKVKVYEEMMREGVKQEIAWGQYVIGDNIQGLS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
               E Y+ ++ N R   +G  PL++  +       W+S+  +    + +FFE + T Y 
Sbjct: 279 RKMLEDYIHYLGNLRWKSLGYAPLYEDNQTEPESMHWVSQYSNANMVKTDFFEAKSTAYA 338

Query: 118 QGAELKWD 125
           +   L+ D
Sbjct: 339 KSTALEDD 346


>gi|257067181|ref|YP_003153437.1| ribonucleotide-diphosphate reductase subunit beta [Anaerococcus
           prevotii DSM 20548]
 gi|256799061|gb|ACV29716.1| Ribonucleoside-diphosphate reductase [Anaerococcus prevotii DSM
           20548]
          Length = 352

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +IN +K E   L+  E Q   R ML E    EIA+   ++     GLN
Sbjct: 224 RDENTHLWLFRSLINDLKKEREDLFVPELQNYYREMLKEGVEQEIAWGKYSIGNSIAGLN 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
               E Y++++ N R   +GLEPL++  +       W+ E  D    + +FFE +VT Y 
Sbjct: 284 EKMIEDYIKYLGNLRAKGLGLEPLYEGYKEIPESMKWVDEYSDPNGVKTDFFEAKVTAYS 343

Query: 118 QGAELKWD 125
           + + ++ D
Sbjct: 344 KSSIIEDD 351


>gi|66822029|ref|XP_644369.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
           AX4]
 gi|66823381|ref|XP_645045.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
           AX4]
 gi|41019487|sp|P42521|RIR2_DICDI RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|29611978|gb|AAB72227.2| ribonucleotide reductase small subunit [Dictyostelium discoideum]
 gi|60472492|gb|EAL70444.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
           AX4]
 gi|60472997|gb|EAL70945.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
           AX4]
          Length = 338

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 9/120 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  +++        K   +    M+ +A   E  +  E++P   +G+N
Sbjct: 206 RDEGLHCDFACLLYTKLQR-------KLDPKVIEKMIRDAVECEKEFICESLPVDLIGMN 258

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           + S  QY++F A+R    +G + +F  + NPF WM E+I L+++ NFFE +V EY +   
Sbjct: 259 SRSMSQYIEFCADRLVVSLGYKKIFN-SSNPFEWM-EMISLQRKSNFFEGKVAEYAKTGV 316


>gi|258648774|ref|ZP_05736243.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           tannerae ATCC 51259]
 gi|260851104|gb|EEX70973.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           tannerae ATCC 51259]
          Length = 350

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     ++ ++K E P ++T +     R M+ +    EI +    +     GL 
Sbjct: 222 RDENTHLWLFRSILLELKKEAPEMFTPDKVDVYRQMIAQGVEEEIKWGEYVLGDKIEGLT 281

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
           +     Y++++ N R   +G +PL+  Y + P    W+S+  +    + +FFE R T Y 
Sbjct: 282 SEMIRDYIKYLGNLRTTSLGFDPLYDGYDKEPPSMSWVSQYSNANMIKTDFFEARSTAYA 341

Query: 118 QGAELKWD 125
           + + L  D
Sbjct: 342 KSSALIDD 349


>gi|256545921|ref|ZP_05473276.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           vaginalis ATCC 51170]
 gi|256398343|gb|EEU11965.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           vaginalis ATCC 51170]
          Length = 352

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 38/128 (29%), Positives = 68/128 (53%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +IN +K E P L+T E ++   ++L E    EIA+    +     GLN
Sbjct: 224 RDENTHLWLFRSMINDLKEERPDLFTDELKEFYLSLLKEGVEQEIAWGKYAIGDEIQGLN 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-EKNFFETRVTEYQ 117
           +   E Y++++ N R   +GL  +++  E+      W+SE  D  + + +FFE +V+ Y 
Sbjct: 284 SQMIEDYIKYLGNLRAKGLGLGTIYEGYEDEPQSMKWVSEYSDPNQVKTDFFEGKVSAYS 343

Query: 118 QGAELKWD 125
           + + ++ D
Sbjct: 344 KSSVIEDD 351


>gi|282861024|ref|ZP_06270089.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. ACTE]
 gi|282563682|gb|EFB69219.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. ACTE]
          Length = 340

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 41/126 (32%), Positives = 73/126 (57%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ +  +   +G  G+N
Sbjct: 214 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLREAVEAELQFGRDLCGEGLPGMN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
             S  QY++ +A++R  ++G   L+  +ENPF +M E+  +++  NFFE R + YQ    
Sbjct: 274 TESMRQYLECVADQRLTRLGFPALY-GSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 331

Query: 120 AELKWD 125
             + +D
Sbjct: 332 GSVGFD 337


>gi|303237757|ref|ZP_07324316.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           disiens FB035-09AN]
 gi|302482043|gb|EFL45079.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           disiens FB035-09AN]
          Length = 349

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T E       M+ E    EIA+    +     GL 
Sbjct: 221 RDENTHLWLFRNIIVELKQEQPELFTPERIAVYEEMMREGVRQEIAWGQYVIGDKVQGLT 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y+ ++ N R   +G   L+++ +N      W+++  +  K + +FFE + T Y 
Sbjct: 281 QQMVADYIHYLGNLRWRSLGFGNLYEHNQNEPDDMQWVAQYSNANKVKTDFFEAKSTAYA 340

Query: 118 QGAELKWD 125
           +   L  D
Sbjct: 341 KSTALIDD 348


>gi|239944172|ref|ZP_04696109.1| putative ribonucleoside-diphosphate reductase small subunit
           [Streptomyces roseosporus NRRL 15998]
 gi|239990628|ref|ZP_04711292.1| putative ribonucleoside-diphosphate reductase small subunit
           [Streptomyces roseosporus NRRL 11379]
 gi|291447643|ref|ZP_06587033.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           roseosporus NRRL 15998]
 gi|291350590|gb|EFE77494.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           roseosporus NRRL 15998]
          Length = 338

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 41/122 (33%), Positives = 72/122 (59%), Gaps = 2/122 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+  E QQ+   ML EA   E+ +  +   +G  G+N
Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPDLFDDELQQQVTDMLKEAVEAELQFGRDLCGEGLPGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G   ++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 272 TESMRQYLECVADQRLARLGFPTVY-GSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329

Query: 122 LK 123
             
Sbjct: 330 GS 331


>gi|56416698|ref|YP_153772.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           marginale str. St. Maries]
 gi|254994906|ref|ZP_05277096.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           marginale str. Mississippi]
 gi|255003042|ref|ZP_05278006.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           marginale str. Puerto Rico]
 gi|255004164|ref|ZP_05278965.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           marginale str. Virginia]
 gi|56387930|gb|AAV86517.1| ribonuceoside-diphosphate reductase beta chain [Anaplasma marginale
           str. St. Maries]
          Length = 324

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 44/126 (34%), Positives = 67/126 (53%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60
           RDE+LH    I + N    EN  +W +  +++          LE  +       G   GL
Sbjct: 193 RDETLHTESIIRLFNTFIHENQEIWDENLREELYGACRVIVSLEDEFIDLAFALGDVEGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A   ++Y+++IANRR  Q+ LEP++    NP PW+ E+++  +  NFFE RVTEY + A
Sbjct: 253 SAAEVKRYIRYIANRRLKQLDLEPIYGDNVNPLPWLDEILNGVEHTNFFENRVTEYSRAA 312

Query: 121 -ELKWD 125
            E  WD
Sbjct: 313 TEGTWD 318


>gi|73974202|ref|XP_858105.1| PREDICTED: similar to ribonucleotide reductase M2 B (TP53
           inducible) isoform 4 [Canis familiaris]
          Length = 374

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 32/144 (22%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEI--------------- 46
           RDE LH +F   +         +L  K  +++ R ++  A  +E                
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQVSREAYMISTSLFLE 278

Query: 47  --------AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE 98
                    +  E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E
Sbjct: 279 IATCRSKHEFLTEALPVGLIGMNCVLMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-E 336

Query: 99  VIDLKKEKNFFETRVTEYQQGAEL 122
            I L+ + NFFE RV EYQ+ A +
Sbjct: 337 NISLEGKTNFFEKRVAEYQRFAVM 360


>gi|114799612|ref|YP_759103.1| ribonucleotide-diphosphate reductase subunit beta [Hyphomonas
           neptunium ATCC 15444]
 gi|114739786|gb|ABI77911.1| ribonucleoside-diphosphate reductase, beta subunit [Hyphomonas
           neptunium ATCC 15444]
          Length = 345

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 2/122 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDESLH    I + +    E   + T E +++ R        LE  +       G   G
Sbjct: 197 IRDESLHCEGMIKLFHSFCAETG-VMTDELRERIRDCCRTVVALEDKFIELAFEMGPVEG 255

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           + A   + Y+++IA+ R +Q+ LEP++  T++P PW++E+++  +  NFFE R TEY +G
Sbjct: 256 MTADDIKNYIRYIADWRLNQLKLEPIYGVTKHPIPWLTEILNGVEHANFFEQRSTEYSKG 315

Query: 120 AE 121
           A 
Sbjct: 316 AT 317


>gi|329939692|ref|ZP_08288993.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           griseoaurantiacus M045]
 gi|329301262|gb|EGG45157.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           griseoaurantiacus M045]
          Length = 347

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 42/126 (33%), Positives = 75/126 (59%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+ +E  ++   ML EA   E+ +A +    G  G+N
Sbjct: 221 RDETMHMSFAFDVVDTVRKEEPGLFDEELGRQVTDMLREAVEAELQFARDLCGDGLPGMN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
             S  QY+Q +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ    
Sbjct: 281 TESMRQYLQCVADQRLVRLGFAPVY-GSENPFSFM-ELQGVQELTNFFERRASAYQVAVE 338

Query: 120 AELKWD 125
             + +D
Sbjct: 339 GSVGFD 344


>gi|222475064|ref|YP_002563479.1| ribonuceoside-diphosphate reductase beta chain (nrdB) [Anaplasma
           marginale str. Florida]
 gi|222419200|gb|ACM49223.1| ribonuceoside-diphosphate reductase beta chain (nrdB) [Anaplasma
           marginale str. Florida]
          Length = 343

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 44/126 (34%), Positives = 67/126 (53%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60
           RDE+LH    I + N    EN  +W +  +++          LE  +       G   GL
Sbjct: 212 RDETLHTESIIRLFNTFIHENQEIWDENLREELYGACRVIVSLEDEFIDLAFALGDVEGL 271

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A   ++Y+++IANRR  Q+ LEP++    NP PW+ E+++  +  NFFE RVTEY + A
Sbjct: 272 SAAEVKRYIRYIANRRLKQLDLEPIYGDNVNPLPWLDEILNGVEHTNFFENRVTEYSRAA 331

Query: 121 -ELKWD 125
            E  WD
Sbjct: 332 TEGTWD 337


>gi|307328555|ref|ZP_07607729.1| Ribonucleoside-diphosphate reductase [Streptomyces violaceusniger
           Tu 4113]
 gi|306885823|gb|EFN16835.1| Ribonucleoside-diphosphate reductase [Streptomyces violaceusniger
           Tu 4113]
          Length = 340

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 42/126 (33%), Positives = 74/126 (58%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F   V++ ++ E P L+  E +Q+   ML EA   E+ +A +    G  G+N
Sbjct: 214 RDESMHMEFAFSVVDTVREEEPDLFDDELRQQVTDMLKEAVEAELQFARDLCGDGLPGMN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
             S ++Y+Q +A++R  ++G   +F  +ENPF +M E+ ++++  NFFE R + YQ    
Sbjct: 274 TASMQEYLQCVADQRLMRLGFPAVF-GSENPFSFM-ELQNVQELTNFFERRASAYQVAVE 331

Query: 120 AELKWD 125
             + +D
Sbjct: 332 GSVAFD 337


>gi|157827263|ref|YP_001496327.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           bellii OSU 85-389]
 gi|157802567|gb|ABV79290.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           bellii OSU 85-389]
          Length = 324

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH N  I +      ENP +WT+  + +           E A+       G   G
Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTENLRSRIYKACTTIVHFEDAFIALAFEVGGIEG 248

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A     Y+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TEY + 
Sbjct: 249 LTADEVRLYIRYIADRRLFQLGLKDIYMVKNNPLPWLDEMLNGVEHTNFFENRATEYSKA 308

Query: 120 A-ELKWD 125
           A    W+
Sbjct: 309 ATTGSWE 315


>gi|91205547|ref|YP_537902.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           bellii RML369-C]
 gi|91069091|gb|ABE04813.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia bellii
           RML369-C]
          Length = 324

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH N  I +      ENP +WT+  + +           E A+       G   G
Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTENLRSRIYKACTTIVHFEDAFIALAFEVGGIEG 248

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A     Y+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TEY + 
Sbjct: 249 LTADEVRLYIRYIADRRLFQLGLKDIYMVKNNPLPWLDEMLNGVEHTNFFENRATEYSKA 308

Query: 120 A-ELKWD 125
           A    W+
Sbjct: 309 ATTGSWE 315


>gi|40556174|ref|NP_955259.1| CNPV236 ribonucleotide reductase small subunit [Canarypox virus]
 gi|40233999|gb|AAR83582.1| CNPV236 ribonucleotide reductase small subunit [Canarypox virus]
          Length = 323

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  Q +   ++  A  +E  +  E +    +G+N
Sbjct: 197 RDEGLHCDFACLLF------TNYLSHKPSQDRVYEIIDSAVSVETEFLTEALSIDLIGMN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           + S  +Y++F+++R    +G    +   ENPF +M E I L+ + NFFE RV+ YQ+   
Sbjct: 251 SKSMIEYIKFVSDRLLVSLGFSKKYN-VENPFSFM-ENISLEGKANFFEKRVSNYQKMGV 308

Query: 122 LK 123
           + 
Sbjct: 309 MS 310


>gi|225010999|ref|ZP_03701465.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
           MS024-3C]
 gi|225004906|gb|EEG42862.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
           MS024-3C]
          Length = 328

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 8/124 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H ++ + + N       HL  K  + + R +L +A  +E  +  E++P   +G+N
Sbjct: 199 RDEGMHCDYAVHLHNH------HLINKVPKARIREILVDALNIERTFITESLPASLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+ +R   ++  E  +  + NPF +M  +I L+ + NFFE RV+EYQ+   
Sbjct: 253 AKLMTQYLEFVTDRLLVELQCEKEYNVS-NPFDFMD-MISLQGKTNFFEKRVSEYQKAGV 310

Query: 122 LKWD 125
           L  D
Sbjct: 311 LNKD 314


>gi|320585888|gb|EFW98567.1| ribonucleotide reductase small subunit [Grosmannia clavigera
           kw1407]
          Length = 378

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 9/114 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q    ++ +A  +E  +  E +P   +G+N
Sbjct: 256 RDEGLHTDFACLLFS-------HLKNRPSKQLIEEIIVDAVKIEQEFLTEALPCALLGMN 308

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
           +   +QY++F+A+R    +G + ++  + NPF +M E I L  + NFFE RV E
Sbjct: 309 STLMKQYIEFVADRLLVALGNDKVYN-STNPFDFM-ENISLGGKTNFFEKRVPE 360


>gi|68304258|ref|YP_249726.1| RR2 [Chrysodeixis chalcites nucleopolyhedrovirus]
 gi|67973087|gb|AAY84053.1| RR2 [Chrysodeixis chalcites nucleopolyhedrovirus]
          Length = 318

 Score =  145 bits (366), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 6/120 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F     N+   E      K  + K  +M  EA  +E  +    +P   +G+N
Sbjct: 194 RDEGLHTDFACLYYNKYIPE----KNKLSKTKVLSMFVEAVDIEKDFFTNALPVAMLGMN 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           + S  +Y++F+A+R   ++G +  F  T NPF +M+  I L+ + NFFE RV EY++   
Sbjct: 250 SQSMCEYIEFVADRLLFELGYDKHFN-TANPFEFMN-NISLEGKTNFFEKRVGEYKRFGA 307


>gi|131840053|ref|YP_001096062.1| ORF23 [Cyprinid herpesvirus 3]
 gi|84181618|gb|ABC55221.1| hypothetical protein [Cyprinid herpesvirus 3]
 gi|109706628|gb|ABG42854.1| ORF23 [Cyprinid herpesvirus 3]
 gi|129560539|dbj|BAF48834.1| ribonucleotide reductase small chain [Cyprinid herpesvirus 3]
          Length = 335

 Score =  145 bits (366), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 8/124 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K  +++ R ++ EA  +E  +  +++P   VG+N
Sbjct: 208 RDEGLHRDFACLLFSS------HLRHKPSKERVRAIITEAVEIEKEFLTQSLPVSLVGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                +Y+Q++A+    Q+GL  L+  T  PF +M E I L+ + NFFE RV +YQ    
Sbjct: 262 HDLMCKYIQYVADHLLCQMGLSRLYN-TPCPFDFM-ENISLEGKTNFFEKRVADYQVKTT 319

Query: 122 LKWD 125
              D
Sbjct: 320 STVD 323


>gi|225386408|ref|ZP_03756172.1| hypothetical protein CLOSTASPAR_00155 [Clostridium asparagiforme
           DSM 15981]
 gi|225047489|gb|EEG57735.1| hypothetical protein CLOSTASPAR_00155 [Clostridium asparagiforme
           DSM 15981]
          Length = 347

 Score =  145 bits (366), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L++ E  +  + M+ E    EIA+ H  +     GL 
Sbjct: 219 RDENTHLWLLRNMILELKKEEPQLFSPETVEMLKAMVEEGVEQEIAWGHYVIGDRISGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
                +Y++++ N R   +G EPL++ Y E P    W+ +  +    + +FFE + T Y 
Sbjct: 279 REMVTEYIRYLGNLRWTSLGFEPLYEGYEEEPESMKWVGQYSNANMVKTDFFEAKSTAYA 338

Query: 118 QGAELKWD 125
           +   L  D
Sbjct: 339 KSTALVDD 346


>gi|242309209|ref|ZP_04808364.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pullorum MIT 98-5489]
 gi|239524250|gb|EEQ64116.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pullorum MIT 98-5489]
          Length = 341

 Score =  145 bits (366), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN  K E+P  +TK+ +++   M  EA  +EIA+         +GL 
Sbjct: 217 RDEVTHLLLFQNMINSTKKESPEFFTKDLEEEVLEMFREAVKVEIAWGEYITQGQILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120
           A   ++Y++++A+ R  ++GL  L+   ++P  W+       + + NFFE  VT Y +G+
Sbjct: 277 AEIIQEYIKYLADDRLRRVGLPVLYN-AKHPIKWVDSFSSFNEQKTNFFEGNVTNYAKGS 335

Query: 121 ELKWD 125
            + +D
Sbjct: 336 -INFD 339


>gi|317472120|ref|ZP_07931452.1| ribonucleotide reductase [Anaerostipes sp. 3_2_56FAA]
 gi|316900524|gb|EFV22506.1| ribonucleotide reductase [Anaerostipes sp. 3_2_56FAA]
          Length = 347

 Score =  145 bits (366), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ ++K E P L+  +     R M+ +    EI + H  +     GL 
Sbjct: 219 RDENTHLWLFKNILLELKKEEPSLFHPDCINDYRRMIKKGCEQEIRWGHYVIGDEIQGLK 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
               E+Y++++ N RC  +G EP++  +E       W+S+  +    + +FFE + T Y 
Sbjct: 279 KEMVEEYIRYLGNLRCQNLGFEPIYPGSETEPESMSWVSQFSNANMIKTDFFEAKSTAYA 338

Query: 118 QGAELKWD 125
           + + L  D
Sbjct: 339 KSSALVDD 346


>gi|227485717|ref|ZP_03916033.1| ribonucleoside-diphosphate reductase [Anaerococcus lactolyticus
           ATCC 51172]
 gi|227236272|gb|EEI86287.1| ribonucleoside-diphosphate reductase [Anaerococcus lactolyticus
           ATCC 51172]
          Length = 352

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 43/128 (33%), Positives = 66/128 (51%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +IN +K E P L+T E     R ML E    EI +    +     GL+
Sbjct: 224 RDENTHLWLFRSLINDLKKERPDLFTPEATIVYRDMLKEGVRQEIEWGKYAIGDNIAGLS 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
               E Y++++ N R   +G +PLF+ YTE P    W+ E  D  + + +FFE +VT Y 
Sbjct: 284 TTMIEDYIKYLGNLRAKGLGFDPLFEGYTEIPQSMKWVDEYSDPNRVKTDFFEAKVTAYS 343

Query: 118 QGAELKWD 125
           + + ++ D
Sbjct: 344 KSSIIEDD 351


>gi|325286576|ref|YP_004262366.1| Ribonucleoside-diphosphate reductase [Cellulophaga lytica DSM 7489]
 gi|324322030|gb|ADY29495.1| Ribonucleoside-diphosphate reductase [Cellulophaga lytica DSM 7489]
          Length = 328

 Score =  144 bits (365), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 66/120 (55%), Gaps = 8/120 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H ++ + + N       HL  K  +++   +L +A  +E  +  E++P   +G+N
Sbjct: 199 RDEGMHCDYAVHLHNH------HLINKVPKERITEILVDALDIEREFITESLPVSLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+ +R   ++  + ++  + NPF +M  +I L+ + NFFE RV EYQ+   
Sbjct: 253 SKLMTQYLEFVTDRLLVELNCDKVYN-STNPFDFMD-MISLQGKTNFFEKRVAEYQKSGV 310


>gi|260589755|ref|ZP_05855668.1| ribonucleoside-diphosphate reductase, beta subunit [Blautia
           hansenii DSM 20583]
 gi|260539995|gb|EEX20564.1| ribonucleoside-diphosphate reductase, beta subunit [Blautia
           hansenii DSM 20583]
          Length = 359

 Score =  144 bits (365), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I Q+K E P L+TKE  Q  + ML E    EIA+ H  +     G++
Sbjct: 231 RDENTHLWLFRNMILQLKEEEPELFTKENIQALKEMLMEGVEQEIAWGHYVLGDDIPGIS 290

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
                +Y++++ N R   +G + ++  Y + P    W+S   +    + +FFE + T Y 
Sbjct: 291 KEMITEYIKYLGNLRFTGLGFDVVYPGYEKEPESMKWVSYYSNANMVKTDFFEAKSTAYA 350

Query: 118 QGAELKWD 125
           +   L  D
Sbjct: 351 KSTALLDD 358


>gi|331083185|ref|ZP_08332301.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 6_1_63FAA]
 gi|330404574|gb|EGG84114.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 6_1_63FAA]
          Length = 347

 Score =  144 bits (365), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I Q+K E P L+TKE  Q  + ML E    EIA+ H  +     G++
Sbjct: 219 RDENTHLWLFRNMILQLKEEEPELFTKENIQALKEMLMEGVEQEIAWGHYVLGDDIPGIS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
                +Y++++ N R   +G + ++  Y + P    W+S   +    + +FFE + T Y 
Sbjct: 279 KEMITEYIKYLGNLRFTGLGFDVVYPGYEKEPESMKWVSYYSNANMVKTDFFEAKSTAYA 338

Query: 118 QGAELKWD 125
           +   L  D
Sbjct: 339 KSTALLDD 346


>gi|265756566|ref|ZP_06090772.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
           3_1_33FAA]
 gi|263233754|gb|EEZ19369.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
           3_1_33FAA]
          Length = 349

 Score =  144 bits (365), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T +  +    M+ E    EI +    +     GLN
Sbjct: 221 RDENTHLWLFRNIILELKKEEPDLFTPDKVKIYEYMMREGVKQEIEWGQYVIGDNIQGLN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
               E Y+Q++ N R   +G  PL++   + P    W+S+  +    + +FFE + T Y 
Sbjct: 281 WKMIEDYIQYLGNLRWSSLGFGPLYEENHKEPESMHWVSQYSNANMVKTDFFEAKSTAYA 340

Query: 118 QGAELKWD 125
           +   L+ D
Sbjct: 341 KSTALEDD 348


>gi|152989800|ref|YP_001355522.1| ribonucleotide-diphosphate reductase subunit beta [Nitratiruptor
           sp. SB155-2]
 gi|151421661|dbj|BAF69165.1| ribonucleoside-diphosphate reductase, beta subunit [Nitratiruptor
           sp. SB155-2]
          Length = 341

 Score =  144 bits (365), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN +K E P L+TKE       M   A  LE ++         +GL 
Sbjct: 217 RDEVTHLLIFQNMINTVKKERPELFTKELIDDVYKMFEGAVDLETSWGKYITQGQILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120
               EQY++++A+ R  ++GLEP++   E+P  W+ +       + NFFE  VT Y +G+
Sbjct: 277 DEIIEQYIKYLADDRLKRVGLEPMYN-VEHPIKWVDDFSKFNDQKTNFFEGNVTNYSKGS 335

Query: 121 ELKWD 125
            L +D
Sbjct: 336 -LDFD 339


>gi|17158292|ref|NP_477710.1| wsv188 [Shrimp white spot syndrome virus]
 gi|14189948|gb|AAK55515.1|AF267731_1 ribonucleotide reductase small subunit [shrimp white spot syndrome
           virus]
 gi|15021490|gb|AAK77767.1|AF369029_98 ORF98, putative ribonucleotide reductase small subunit (RR2)
           [shrimp white spot syndrome virus]
 gi|17016586|gb|AAL33192.1| wsv188 [shrimp white spot syndrome virus]
 gi|19481835|gb|AAL89111.1| WSSV243 [shrimp white spot syndrome virus]
          Length = 413

 Score =  144 bits (365), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 8/121 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   ++ +  ++ P       +++   ++ EA  +E  +   ++P   VG+N
Sbjct: 250 RDEGLHRDFACMLLKKGFVDTP------SRERILEIVTEAVRIEQEFLTVSLPVKLVGMN 303

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A++   ++GLE  +  T NPFP+M   I L+ + NFFE RV EYQ+   
Sbjct: 304 CKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMD-NISLENKTNFFEKRVAEYQRAQV 361

Query: 122 L 122
           +
Sbjct: 362 M 362


>gi|328700093|ref|XP_001944536.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Acyrthosiphon pisum]
          Length = 361

 Score =  144 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 9/120 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  Q     ++ EA  +E  +    +P   VG++
Sbjct: 233 RDEGLHTDFACLLFK-------HLEQKPPQAVITHIICEAVTIEQDFLTNALPVRMVGMS 285

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                 Y++F+A+R  +++G   +++ + NPFP+M  +I  + + NFFE RV +YQ+ + 
Sbjct: 286 CEKMAVYIEFVADRLLNELGCPTVYR-SSNPFPFMD-LISQQGKTNFFEKRVGDYQKASV 343


>gi|319953269|ref|YP_004164536.1| ribonucleoside-diphosphate reductase [Cellulophaga algicola DSM
           14237]
 gi|319421929|gb|ADV49038.1| Ribonucleoside-diphosphate reductase [Cellulophaga algicola DSM
           14237]
          Length = 326

 Score =  144 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 34/124 (27%), Positives = 69/124 (55%), Gaps = 8/124 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F + +       N H+  +  +++   +L +A  +E  +  E++P   +G+N
Sbjct: 198 RDEGMHCDFAVHL------HNKHIINQVPKERITEILVDALNIEREFITESLPASLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+ +R   ++  + ++  + NPF +M  +I ++ + NFFE RV+EYQ+   
Sbjct: 252 SKLMTQYLEFVTDRLLVELECDKVYN-STNPFDFMD-MIGMEGKTNFFEKRVSEYQKAGV 309

Query: 122 LKWD 125
           L  D
Sbjct: 310 LNSD 313


>gi|330837704|ref|YP_004412345.1| ribonucleotide reductase [Spirochaeta coccoides DSM 17374]
 gi|329749607|gb|AEC02963.1| ribonucleotide reductase [Spirochaeta coccoides DSM 17374]
          Length = 360

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     ++ +++ E P ++T     + R M+ +    EIA+ H  +    VGLN
Sbjct: 232 RDETTHLWLFRSILREMQKEEPAMFTPNLVDEYRAMIKQGADQEIAWGHYVIGDDIVGLN 291

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y+Q++ N RC  +G +P+++ + + P    W+ +  +    + +FFE R T Y 
Sbjct: 292 KDMVTDYIQYLGNLRCTDLGFQPIYEGHDKEPETMKWVGQYSNANLIKTDFFEARNTAYA 351

Query: 118 QGAELKWD 125
           +   L  D
Sbjct: 352 KSTSLLDD 359


>gi|223983469|ref|ZP_03633655.1| hypothetical protein HOLDEFILI_00935 [Holdemania filiformis DSM
           12042]
 gi|223964641|gb|EEF68967.1| hypothetical protein HOLDEFILI_00935 [Holdemania filiformis DSM
           12042]
          Length = 348

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L+T E +Q  R ML +    EI +    +     GLN
Sbjct: 220 RDENTHLWLFRSMILELRKEEPQLFTPEREQLYREMLKQGVEEEIEWGCAILGDEIPGLN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y++++ N R   I LE L+   E       W+S+  +    + +FFE R + Y 
Sbjct: 280 KTMIRDYIRYLGNLRAKAIHLEILYPGEEEEPASMKWVSQYANANLIKTDFFEARSSAYA 339

Query: 118 QGAELKWD 125
           + + LK D
Sbjct: 340 KASALKDD 347


>gi|323343338|ref|ZP_08083565.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella
           oralis ATCC 33269]
 gi|323095157|gb|EFZ37731.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella
           oralis ATCC 33269]
          Length = 349

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 6/129 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ ++K E P ++T E  +    M+ E    EIA+    +     GLN
Sbjct: 221 RDENTHLWLFRNILQELKKEEPKMFTPEKVKVYEEMMREGVRQEIAWGQYVIGDEVPGLN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT----ENPFPWMSEVIDLKK-EKNFFETRVTEY 116
                 Y+ ++ N R H +G   L+       EN   W+S+  +    + +FFE + T Y
Sbjct: 281 TKMVSDYIHYLGNLRWHSLGFGYLYDENIQEPEN-MKWVSQYSNANMVKTDFFEAKSTAY 339

Query: 117 QQGAELKWD 125
            +   L+ D
Sbjct: 340 AKSTALEDD 348


>gi|182436093|ref|YP_001823812.1| putative ribonucleoside-diphosphate reductase small subunit
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326776718|ref|ZP_08235983.1| Ribonucleoside-diphosphate reductase [Streptomyces cf. griseus
           XylebKG-1]
 gi|178464609|dbj|BAG19129.1| putative ribonucleoside-diphosphate reductase small subunit
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326657051|gb|EGE41897.1| Ribonucleoside-diphosphate reductase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 338

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 40/126 (31%), Positives = 73/126 (57%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ +  +   +G  G+N
Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPDLFDDALQQQVTDMLKEAVEAELQFGRDLCGEGLPGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
             S  QY++ +A++R  ++G   ++  +ENPF +M E+  +++  NFFE R + YQ    
Sbjct: 272 TESMRQYLECVADQRLARLGFPTVY-GSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329

Query: 120 AELKWD 125
             + +D
Sbjct: 330 GSVGFD 335


>gi|150015087|ref|YP_001307341.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           beijerinckii NCIMB 8052]
 gi|149901552|gb|ABR32385.1| Ribonucleoside-diphosphate reductase [Clostridium beijerinckii
           NCIMB 8052]
          Length = 344

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ ENP L+T+E + + R M+      EI + H  +     G+N
Sbjct: 218 RDENTHLWLFRNIIKELQNENPELFTEEVKNELRNMMKIGVEQEILWGHYVIGDKIQGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
               E Y++++ N+R  +I L PLF +  +NP  W+  + +    + +FFE R T Y + 
Sbjct: 278 KQLIENYIKYLGNKRLKEINLSPLFKEQDKNPASWVDTLSNANSVKTDFFEARSTAYAKV 337

Query: 120 AELKWD 125
             L  D
Sbjct: 338 TTLIDD 343


>gi|167748341|ref|ZP_02420468.1| hypothetical protein ANACAC_03085 [Anaerostipes caccae DSM 14662]
 gi|167652333|gb|EDR96462.1| hypothetical protein ANACAC_03085 [Anaerostipes caccae DSM 14662]
          Length = 358

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ ++K E P L+  +     R M+ +    EI + H  +     GL 
Sbjct: 230 RDENTHLWLFKNILLELKKEEPSLFHPDCINDYRRMIKKGCEQEIRWGHYVIGDEIQGLK 289

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
               E+Y++++ N RC  +G EP++  +E       W+S+  +    + +FFE + T Y 
Sbjct: 290 KEMVEEYIRYLGNLRCQNLGFEPIYPGSETEPESMSWVSQFSNANMIKTDFFEAKSTAYA 349

Query: 118 QGAELKWD 125
           + + L  D
Sbjct: 350 KSSALVDD 357


>gi|256391238|ref|YP_003112802.1| ribonucleoside-diphosphate reductase [Catenulispora acidiphila DSM
           44928]
 gi|256357464|gb|ACU70961.1| Ribonucleoside-diphosphate reductase [Catenulispora acidiphila DSM
           44928]
          Length = 331

 Score =  144 bits (364), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F  DV++ ++ E P L+ ++  Q+ R ML EA   E  +A + +  G  GL 
Sbjct: 205 RDESMHMAFAFDVVDTVRAEEPDLFDEKMAQQVREMLAEAVECETQFAGDLLGGGVSGLP 264

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ--QG 119
                 Y++ +A+RR  Q+GLEP++  T NP  +M E+ D+++  NFFE RV+ YQ   G
Sbjct: 265 VADMRAYLEHVADRRLEQLGLEPMY-GTANPLGFM-ELQDVQELSNFFERRVSAYQVAVG 322

Query: 120 AELKWD 125
             + +D
Sbjct: 323 GSVSFD 328


>gi|282174133|ref|YP_003358235.1| ORF96 [Anguillid herpesvirus 1]
 gi|281308976|gb|ADA57859.1| ORF96 [Anguillid herpesvirus 1]
          Length = 328

 Score =  144 bits (364), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 8/117 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  K   ++   ++ EA  +E  +  E +P   +G+N
Sbjct: 202 RDEGLHCDFACLLFK------DHILGKPGYERVSQIVTEAVEIEKEFLSEALPVRLLGIN 255

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                 Y++F+A+R    +G    + + +NPF +M E I ++ + NFFE  V++Y++
Sbjct: 256 CEQMCSYIEFVADRLLAALGFPKRY-HVKNPFGFM-ESISMEGKTNFFEKNVSQYKK 310


>gi|7672989|gb|AAF66689.1|AF144620_1 ribonucleotide reductase small subunit [shrimp white spot syndrome
           virus]
          Length = 413

 Score =  144 bits (364), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 8/121 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   ++ +  ++ P       +++   ++ EA  +E  +   ++P   VG+N
Sbjct: 250 RDEGLHRDFACMLLKKGFVDTP------SRERILEIVTEAVRIEQEFLTVSLPVKLVGMN 303

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A++   ++GLE  +  T NPFP+M   I L+ + NFFE RV EYQ+   
Sbjct: 304 CKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMD-NISLENKTNFFEKRVAEYQRAQV 361

Query: 122 L 122
           +
Sbjct: 362 M 362


>gi|269958883|ref|YP_003328672.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           centrale str. Israel]
 gi|269848714|gb|ACZ49358.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           centrale str. Israel]
          Length = 332

 Score =  144 bits (363), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60
           RDE+LH    I + N    EN  +W    + +          LE  +       G   GL
Sbjct: 201 RDETLHTESIIRLFNTFIHENQEIWDANLRAELYGACRVIVSLEDEFIDLAFALGDVEGL 260

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A   ++Y+++IANRR  Q+ LEP++    NP PW+ E+++  +  NFFE RVTEY + A
Sbjct: 261 SASEVKRYIRYIANRRLKQLDLEPIYGDNVNPLPWLDEILNGVEHTNFFENRVTEYSRAA 320

Query: 121 -ELKWD 125
            E  WD
Sbjct: 321 TEGTWD 326


>gi|239628850|ref|ZP_04671881.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239518996|gb|EEQ58862.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 347

 Score =  144 bits (363), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I ++K E P L+T +  +    ML E    EI +    +     GL 
Sbjct: 219 RDENTHLWLFRSMIGELKKEEPGLFTPDNVKMLEDMLREGVSQEIEWGCYVIGDEVPGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y++++ N R   +G EPL++          W+++  +    + +FFE + T Y 
Sbjct: 279 KDMVSSYIKYLGNLRWTGLGFEPLYEGYGKEPESMAWVNQYSNANMVKTDFFEAKSTAYA 338

Query: 118 QGAELKWD 125
           + A +  D
Sbjct: 339 KSAAIIDD 346


>gi|157952945|ref|YP_001497837.1| hypothetical protein NY2A_B641R [Paramecium bursaria Chlorella
           virus NY2A]
 gi|155123172|gb|ABT15040.1| hypothetical protein NY2A_B641R [Paramecium bursaria Chlorella
           virus NY2A]
          Length = 324

 Score =  144 bits (363), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  FG  + ++++        K   +  + ++ EA   E  +  + +P   +G+N
Sbjct: 200 RDEGLHQQFGELMYSKLQ-------NKLSFETIKQIIMEAVTNEKEFICDAIPCSMIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G E ++  ++NPF +M E+I L+ + NFFE RV++YQ+   
Sbjct: 253 ADLMNQYIEFVADRIFTALGYEKVYN-SKNPFAFM-ELISLEGKTNFFEKRVSDYQRPGV 310

Query: 122 LK 123
           + 
Sbjct: 311 MN 312


>gi|168702494|ref|ZP_02734771.1| ribonucleoside-diphosphate reductase, beta subunit [Gemmata
           obscuriglobus UQM 2246]
          Length = 332

 Score =  144 bits (363), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 2/118 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H+ F   VI+ ++ E P L+  E + +   ML EA   E A+A + + +G  GL+
Sbjct: 206 RDESAHMAFAFRVIDTVRREEPDLFDAELEAQIVAMLREAVECETAFARDVLGQGVAGLS 265

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                 Y++++A+RR   +G+ P+F   +NPF +M  + D+++  NFFE RV+ YQ G
Sbjct: 266 LADLRSYLEYVADRRLESLGIAPVF-GAKNPFGFMD-LQDVQELTNFFERRVSAYQLG 321


>gi|325478871|gb|EGC81981.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           prevotii ACS-065-V-Col13]
          Length = 352

 Score =  144 bits (363), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +IN ++ E   L+TKE ++  R ML E    EIA+    +     GL+
Sbjct: 224 RDENTHLWLFRSLINDLRKEREDLFTKEHKEYYRNMLKEGVEQEIAWGKYAIGDNIAGLS 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
               E Y++++ N R   +GLE L++ YTE P    W+ E  D    + +FFE +VT Y 
Sbjct: 284 EKMIEDYIKYLGNLRAKGLGLEALYEGYTEIPDSMKWVDEYSDPNAVKTDFFEAKVTAYS 343

Query: 118 QGAELKWD 125
           + + ++ D
Sbjct: 344 KSSIIEDD 351


>gi|260912588|ref|ZP_05919119.1| ribonucleoside-diphosphate reductase [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260633300|gb|EEX51459.1| ribonucleoside-diphosphate reductase [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 348

 Score =  144 bits (363), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I+++K E P  +T E  +    M+ E    EIA+    +     GLN
Sbjct: 220 RDENTHLWLFRNIIHEMKKEEPEYFTPEKVKLYEEMMREGVRQEIAWGQYVIGDEVQGLN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y++++ N R   +G   LF+   E P    W+S+  +    + +FFE + T Y 
Sbjct: 280 GQMVNDYIRYLGNMRWRSLGFGNLFEDNIEEPENMRWVSQYANANMVKTDFFEAKSTAYA 339

Query: 118 QGAELKWD 125
           +   ++ D
Sbjct: 340 KSTAIEDD 347


>gi|210631890|ref|ZP_03297102.1| hypothetical protein COLSTE_00992 [Collinsella stercoris DSM 13279]
 gi|210159815|gb|EEA90786.1| hypothetical protein COLSTE_00992 [Collinsella stercoris DSM 13279]
          Length = 352

 Score =  144 bits (363), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ E P L+T E  +  R ML E    EIA+    +     GL 
Sbjct: 224 RDENTHLWLFRNIILELQKEEPQLFTSENVEMLRQMLEEGVRQEIAWGRYVLGDAIPGLT 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
               E Y++++ N R   +G   L++          W+S+  +    + +FFE + T Y 
Sbjct: 284 GDMVEGYIKYLGNLRWSSLGFGQLYEGYRSEPEDMAWVSQYSNANMVKTDFFEAKSTAYA 343

Query: 118 QGAELKWD 125
           +   L  D
Sbjct: 344 KSTALVDD 351


>gi|255724924|ref|XP_002547391.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
           tropicalis MYA-3404]
 gi|240135282|gb|EER34836.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
           tropicalis MYA-3404]
          Length = 387

 Score =  144 bits (363), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H ++   + +       +L  K        ++ EA  +E  Y  + +P   +G+N
Sbjct: 259 RDEGIHTDYACLLFS-------YLENKPDPSIIEKIITEAVSIEKKYFSDALPVSLLGMN 311

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY+++ A+R     G +  +  T NPF +M E I L  + NFFE RV++YQ+   
Sbjct: 312 CDLMCQYVEYCADRLLVAFGNDKYYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQRAGV 369

Query: 122 LK 123
           ++
Sbjct: 370 ME 371


>gi|291165654|gb|EFE27703.1| ribonucleoside-diphosphate reductase, beta subunit [Filifactor
           alocis ATCC 35896]
          Length = 348

 Score =  144 bits (363), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I ++K E P L+T E  +  R M+ +    EI +A+  +     GL 
Sbjct: 220 RDENSHLWLFRSIILELKKEEPELFTPENIEVFRNMIRQGVEEEIKWANYVIGDHIKGLT 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
               E Y++++ N RC  +G EP+++          W+SE  D    + +FFE +V+ Y 
Sbjct: 280 MQMVEDYLKYLGNLRCRGLGFEPIYEGYQREPESMSWVSEYSDPNAIKTDFFEGKVSAYA 339

Query: 118 QGAELKWD 125
           + + ++ D
Sbjct: 340 KSSVIEDD 347


>gi|160937686|ref|ZP_02085046.1| hypothetical protein CLOBOL_02576 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439331|gb|EDP17083.1| hypothetical protein CLOBOL_02576 [Clostridium bolteae ATCC
           BAA-613]
          Length = 347

 Score =  144 bits (363), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L+T +     R+ML E    EI +    +     GL 
Sbjct: 219 RDENTHLWLFRSMIAELRKEEPQLFTPKMVDMLRSMLEEGVAQEIQWGCYVIGDDVPGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y++++ N R   +G   L++ Y E P    W+++  +    + +FFE + T Y 
Sbjct: 279 REMVTDYIRYLGNLRWSGLGFGTLYEGYDEEPQSMKWVNQYSNANMVKTDFFEAKSTAYA 338

Query: 118 QGAELKWD 125
           + A +  D
Sbjct: 339 KSAAIVDD 346


>gi|311743885|ref|ZP_07717691.1| ribonucleotide-diphosphate reductase beta subunit [Aeromicrobium
           marinum DSM 15272]
 gi|311313015|gb|EFQ82926.1| ribonucleotide-diphosphate reductase beta subunit [Aeromicrobium
           marinum DSM 15272]
          Length = 357

 Score =  143 bits (362), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 48/123 (39%), Positives = 73/123 (59%), Gaps = 1/123 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FGI++I  +  ENP + T EF  + + M+ +A  +E AY  + +P G +GL
Sbjct: 236 VRDESLHLKFGINLILTVLEENPEVATAEFAAEIQQMVLDAVEMEEAYNRDLLPGGILGL 295

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    QY++++A+RR  ++G  P +    NP  WM+   D  +  NFFE   T Y+  A
Sbjct: 296 NADYINQYVRYLADRRLEELGFGPHY-GATNPAKWMATANDTLQLVNFFEATNTSYEVNA 354

Query: 121 ELK 123
           +L 
Sbjct: 355 KLT 357


>gi|15639047|ref|NP_218493.1| ribonucleotide-diphosphate reductase subunit beta [Treponema
           pallidum subsp. pallidum str. Nichols]
 gi|189025287|ref|YP_001933059.1| ribonucleotide-diphosphate reductase subunit beta [Treponema
           pallidum subsp. pallidum SS14]
 gi|6093976|sp|O83092|RIR2_TREPA RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|3322311|gb|AAC65049.1| ribonucleoside-diphosphate reductase, subunit beta (nrdB)
           [Treponema pallidum subsp. pallidum str. Nichols]
 gi|189017862|gb|ACD70480.1| ribonucleoside-diphosphate reductase, subunit beta [Treponema
           pallidum subsp. pallidum SS14]
 gi|291059468|gb|ADD72203.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           pallidum subsp. pallidum str. Chicago]
          Length = 351

 Score =  143 bits (362), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P ++T    +  R M+ E    EI +    +     GLN
Sbjct: 223 RDENTHLWLFRSIIQELQKEEPQVFTARNVRLFRDMIREGCEQEIKWGDYVIGDQIPGLN 282

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y++++ N RC  +G EPL++          W+S+  +    + +FFE + T Y 
Sbjct: 283 RHMVADYIRYLGNLRCENLGFEPLYEGHRVEPESMSWVSQYSNANLIKTDFFEAKSTAYA 342

Query: 118 QGAELKWD 125
           + + +  D
Sbjct: 343 KSSAMVDD 350


>gi|88658048|ref|YP_507564.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
           chaffeensis str. Arkansas]
 gi|88599505|gb|ABD44974.1| ribonucleoside-diphosphate reductase, beta subunit [Ehrlichia
           chaffeensis str. Arkansas]
          Length = 324

 Score =  143 bits (362), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH    I + N    EN  +W    +Q+          LE  + +     G   G
Sbjct: 192 VRDETLHTESIIRLFNTFIQENYEIWDDSLKQELYEACRIIVSLEDEFINLAFACGDVEG 251

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L++   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +  NFFE RVTEY + 
Sbjct: 252 LSSKEVKEYIRYIANRRLLQLNLEPIYDTNKNPLLWLDEILNGVEHTNFFENRVTEYARA 311

Query: 120 A-ELKWD 125
           A E  W+
Sbjct: 312 ATEGTWE 318


>gi|155370982|ref|YP_001426516.1| hypothetical protein ATCV1_Z035L [Acanthocystis turfacea Chlorella
           virus 1]
 gi|155124302|gb|ABT16169.1| hypothetical protein ATCV1_Z035L [Acanthocystis turfacea Chlorella
           virus 1]
          Length = 325

 Score =  143 bits (362), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 9/124 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  FG  + ++++        K      ++++ EA   E  +  + +P   +G+N
Sbjct: 201 RDEGLHQQFGELLYSKLE-------NKLSLDVVKSIVEEAVANEKDFICDAIPCRMIGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G    F   ENPF +M E+I L+ + NFFE RV+EYQ+   
Sbjct: 254 SDLMSQYIEFVADRIFTALGYPKQF-GAENPFDFM-ELISLEGKSNFFERRVSEYQKAGV 311

Query: 122 LKWD 125
           +  D
Sbjct: 312 MNAD 315


>gi|315452596|ref|YP_004072866.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter felis
           ATCC 49179]
 gi|315131648|emb|CBY82276.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter felis
           ATCC 49179]
          Length = 347

 Score =  143 bits (362), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL     +I+ +K E P L++K+  ++   M  EA  LE  +         + LN
Sbjct: 223 RDEVTHLALFQSMIHTLKKERPDLFSKDLVEEILEMFKEAVDLESTWGRVITQGEILDLN 282

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
             +   Y++++A+ R H IGL  ++ +T++P  W+ +      +  NFFE RV+ Y +G+
Sbjct: 283 PVTLRAYIEYLADTRLHAIGLPKIY-HTKHPMRWVDQFSSFNSQRSNFFEARVSNYSKGS 341


>gi|260909050|gb|ACX54162.1| RR2 protein [Shrimp white spot syndrome virus]
 gi|260909052|gb|ACX54163.1| RR2 protein [Shrimp white spot syndrome virus]
 gi|260909054|gb|ACX54164.1| RR2 protein [Shrimp white spot syndrome virus]
 gi|260909056|gb|ACX54165.1| RR2 protein [Shrimp white spot syndrome virus]
          Length = 349

 Score =  143 bits (362), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 8/121 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   ++ +  ++ P       +++   ++ EA  +E  +   ++P   VG+N
Sbjct: 235 RDEGLHRDFACMLLKKGFVDTP------SRERILEIVTEAVRIEQEFLTVSLPVKLVGMN 288

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A++   ++GLE  +  T NPFP+M   I L+ + NFFE RV EYQ+   
Sbjct: 289 CKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMD-NISLENKTNFFEKRVAEYQRAQV 346

Query: 122 L 122
           +
Sbjct: 347 M 347


>gi|302867100|ref|YP_003835737.1| ribonucleotide reductase [Micromonospora aurantiaca ATCC 27029]
 gi|315506490|ref|YP_004085377.1| ribonucleotide reductase [Micromonospora sp. L5]
 gi|302569959|gb|ADL46161.1| ribonucleotide reductase [Micromonospora aurantiaca ATCC 27029]
 gi|315413109|gb|ADU11226.1| ribonucleotide reductase [Micromonospora sp. L5]
          Length = 342

 Score =  143 bits (362), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 43/126 (34%), Positives = 78/126 (61%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F  DV+  ++ E P L+  E +++ + ML EA   E+++A + + +G  G++
Sbjct: 216 RDESMHMAFAFDVVETVRAEEPDLFDDEMERQVKEMLAEAVECEVSFAEDLLGQGVPGMS 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
                +Y+Q +A+RR   +G+ P++  + NPF +M E+ D+++  NFFE RV+ YQ G  
Sbjct: 276 LADMREYLQHVADRRLAVLGIAPMY-GSGNPFAFM-ELQDVQELSNFFERRVSAYQVGVT 333

Query: 120 AELKWD 125
             + +D
Sbjct: 334 GSVTFD 339


>gi|295836584|ref|ZP_06823517.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. SPB74]
 gi|197697282|gb|EDY44215.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. SPB74]
          Length = 345

 Score =  143 bits (361), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 40/126 (31%), Positives = 74/126 (58%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+  E +Q+ + ML  A   E+ +A +    G  G+N
Sbjct: 219 RDETMHMSFAFDVVDTVRKEEPELFDAELEQEVKDMLDGAVNAELQFARDLCGDGLPGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
             S  +Y+Q +A++R  ++G  P++  + NPF +M E+  +++  NFFE R + YQ    
Sbjct: 279 TESMREYLQCVADQRLQRLGFAPVY-GSSNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 336

Query: 120 AELKWD 125
             + +D
Sbjct: 337 GSVSFD 342


>gi|325831705|ref|ZP_08164922.1| ribonucleoside-diphosphate reductase, beta subunit [Eggerthella sp.
           HGA1]
 gi|325486576|gb|EGC89025.1| ribonucleoside-diphosphate reductase, beta subunit [Eggerthella sp.
           HGA1]
          Length = 347

 Score =  143 bits (361), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ ++K E P L+T E  ++ R M+ E    EI + H  +     GLN
Sbjct: 219 RDENTHLWLFRNILLELKEEEPELFTPELVEEYRAMIKEGCEQEIRWGHYAIGDEVAGLN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y+Q++ N RC Q+G EPL++  E       W+S+  +    + +FFE R T Y 
Sbjct: 279 KQMVTDYIQYLGNLRCTQLGFEPLYEGHEREPESMSWVSQFSNANMIKTDFFEARSTAYA 338

Query: 118 QGAELKWD 125
           + + L  D
Sbjct: 339 KSSALVDD 346


>gi|300706309|ref|XP_002995432.1| hypothetical protein NCER_101672 [Nosema ceranae BRL01]
 gi|239604534|gb|EEQ81761.1| hypothetical protein NCER_101672 [Nosema ceranae BRL01]
          Length = 325

 Score =  143 bits (361), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +  ++PH            ++ EA  +E  +   ++P   +G+N
Sbjct: 202 RDEGLHCDFACLLNQYLINKSPH---------ILDIVKEAVEIEKEFLGVSLPVNLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A+R    +GLE  +  T NPF +M E I L  + NFF+ R ++YQ+ 
Sbjct: 253 CKLMCQYIEFVADRLLINLGLEKYYN-TLNPFDFM-ENISLVGKTNFFDKRESQYQKA 308


>gi|160881347|ref|YP_001560315.1| ribonucleoside-diphosphate reductase [Clostridium phytofermentans
           ISDg]
 gi|160430013|gb|ABX43576.1| Ribonucleoside-diphosphate reductase [Clostridium phytofermentans
           ISDg]
          Length = 342

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 70/126 (55%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    +++ ++++E   ++TK  +++ R M+      EIA+         +G+N
Sbjct: 214 RDEITHLVLFQNIMKELRVEQKEMFTKGLEEELREMMRTGVEHEIAWGQYVTDNQILGIN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
               +QY+++++N+R   +GLE L+ + T++P  W+    ++   + +FFE +VT Y + 
Sbjct: 274 NELIDQYIKYLSNQRLRAVGLEILYPEITKHPMEWIESFSNINSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AVFDFD 339


>gi|330467634|ref|YP_004405377.1| ribonucleoside-diphosphate reductase [Verrucosispora maris
           AB-18-032]
 gi|328810605|gb|AEB44777.1| Ribonucleoside-diphosphate reductase [Verrucosispora maris
           AB-18-032]
          Length = 342

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 46/126 (36%), Positives = 77/126 (61%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F  DV++ ++ E P L+  E +Q+ R ML EA   E+ +A + + +G  G+ 
Sbjct: 216 RDESMHMAFAFDVVDTVRAEEPDLFDAEMEQQVRDMLAEAVDCEVQFAADLLEQGVSGMP 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
                QY+Q +A+RR   +G+ P++  + NPF +M E+ D+++  NFFE RV+ YQ G  
Sbjct: 276 LADMRQYLQHVADRRLAMLGIAPMY-GSTNPFAFM-ELQDVQELSNFFERRVSAYQVGVT 333

Query: 120 AELKWD 125
             + +D
Sbjct: 334 GTVAFD 339


>gi|159040364|ref|YP_001539617.1| ribonucleoside-diphosphate reductase [Salinispora arenicola
           CNS-205]
 gi|157919199|gb|ABW00627.1| Ribonucleoside-diphosphate reductase [Salinispora arenicola
           CNS-205]
          Length = 350

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 43/126 (34%), Positives = 78/126 (61%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F  DV++ I+ E P L+  + +++ + M+ EA   E  +A + + +G  GL+
Sbjct: 224 RDESMHMAFAFDVVDTIRAEEPDLFDADLERQIKDMVTEAVDCEAQFAEDLLEQGVSGLS 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
                +Y+Q +A+RR   +G+ P++  ++NPF +M E+ D+++  NFFE RV+ YQ G  
Sbjct: 284 LADMREYLQHVADRRLVTLGIAPIY-GSQNPFAFM-ELQDVQELSNFFERRVSAYQVGVS 341

Query: 120 AELKWD 125
             + +D
Sbjct: 342 GSVTFD 347


>gi|167948644|ref|ZP_02535718.1| Ribonucleotide reductase, beta subunit [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 124

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 52/125 (41%), Positives = 64/125 (51%), Gaps = 3/125 (2%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDE LH +FGI V  QI +E          Q  R M  E    E AYA   +    +G 
Sbjct: 3   MRDEVLHASFGIRVAKQIMLEENIAPDP---QAIREMWDECEAAEDAYAGYILRDPILGY 59

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +        +++ANRR  QIGL   +   E   PW+ E  +L+KEKNFFET VTEYQ G 
Sbjct: 60  SKDDHMGQFRYVANRRARQIGLSEPYPGAEATLPWLDEQANLRKEKNFFETTVTEYQTGG 119

Query: 121 ELKWD 125
            L WD
Sbjct: 120 ALNWD 124


>gi|74229799|ref|YP_309003.1| ribonucleotide reductase small subunit (rr2) [Trichoplusia ni SNPV]
 gi|72259713|gb|AAZ67484.1| ribonucleotide reductase small subunit (rr2) [Trichoplusia ni SNPV]
          Length = 318

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 6/120 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F     N+   +      K  + K   M  EA  +E  +    +P   +G+N
Sbjct: 194 RDEGLHTDFACLYYNKYIAKE----DKLSESKVLNMFKEAVDIEKDFFTNALPVAMLGMN 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A S  +Y++F+A+R   ++G E  FK T NPF +M+  I L+ + NFFE RV EY++   
Sbjct: 250 AHSMCEYIEFVADRLLIELGYEKYFK-TLNPFEFMN-NISLEGKTNFFEKRVGEYKRFGA 307


>gi|47213103|emb|CAF89523.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 407

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 22/121 (18%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K   Q    ++  A  +E  +  E +P   +G+N
Sbjct: 295 RDEGLHCDFACLMFK-------HLLHKPSAQTVGAIIRNAVEIEQEFLTEALPVKLIGMN 347

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               ++Y++FI                 ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 348 CQLMKRYIEFIYR--------------AENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 392

Query: 122 L 122
           +
Sbjct: 393 M 393


>gi|326792202|ref|YP_004310023.1| ribonucleotide reductase [Clostridium lentocellum DSM 5427]
 gi|326542966|gb|ADZ84825.1| ribonucleotide reductase [Clostridium lentocellum DSM 5427]
          Length = 342

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K ENP L+T+   ++ R M+      EIA+         +G+N
Sbjct: 214 RDEITHLVVFQNIIKELKKENPELFTESMIEEFREMMRVGVEHEIAWGQYVTANEIMGIN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
               + Y+++++N+R   IGLE L+ + T +P  W+     L   + +FFE +VT Y + 
Sbjct: 274 DQLIDAYIKYLSNQRLKAIGLEELYPEITTHPMAWIDSFSKLNNTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|90023100|ref|YP_528927.1| amino acid adenylation [Saccharophagus degradans 2-40]
 gi|89952700|gb|ABD82715.1| Class Ia ribonucleoside-diphosphate reductase beta subunit
           [Saccharophagus degradans 2-40]
          Length = 368

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 53/125 (42%), Positives = 71/125 (56%), Gaps = 4/125 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDE++H  FGI  ++QI IEN    T       +TM  EA   E  YA   + +  +G 
Sbjct: 248 MRDETMHCAFGIQTVSQIIIENC---TNIDVDAIKTMWEEADEAEANYARYILREPILGY 304

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A    +  +FIANRR  Q+GLE  F   +   PW+ E  +++KEKNFFETRV EYQ   
Sbjct: 305 SANDHIEQFRFIANRRARQLGLEEPFPQAKCALPWLDEQANIRKEKNFFETRVIEYQ-AG 363

Query: 121 ELKWD 125
            L+WD
Sbjct: 364 GLEWD 368


>gi|209170936|ref|YP_002268082.1| agip52 [Agrotis ipsilon multiple nucleopolyhedrovirus]
 gi|208436527|gb|ACI28754.1| ribonucleotide reductase-2B [Agrotis ipsilon multiple
           nucleopolyhedrovirus]
          Length = 313

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 8/123 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F          E      K       +M  EA  +E  +    +P   +G+N
Sbjct: 191 RDEGLHTDFACLYYKTRVTE------KLDSDTILSMFKEAVAIEKEFFTAALPVELLGMN 244

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A S  +Y++F+A+R   Q+G    F    NPF +M+  I L+ + NFFE RV EY++   
Sbjct: 245 AQSMCEYIEFVADRLLVQLGQPKYFN-ARNPFEFMN-NISLEGKTNFFEKRVGEYKRFGA 302

Query: 122 LKW 124
            + 
Sbjct: 303 GED 305


>gi|269865524|ref|XP_002651954.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063427|gb|EED42101.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 205

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   I  +               ++ EA  +E  +  E++P   +G+N
Sbjct: 83  RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 133

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A+R    +G + ++  + NPF +M E I L+ + NFFE R   YQ+G
Sbjct: 134 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 189


>gi|227501022|ref|ZP_03931071.1| ribonucleoside-diphosphate reductase [Anaerococcus tetradius ATCC
           35098]
 gi|227216795|gb|EEI82193.1| ribonucleoside-diphosphate reductase [Anaerococcus tetradius ATCC
           35098]
          Length = 352

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +IN +K E   L+  E Q   R ML E    EIA+    +     GLN
Sbjct: 224 RDENTHLWLFRSLINDLKKEREDLFVPELQNYYRNMLKEGVEQEIAWGKYAIGNEIAGLN 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
               E Y++++ N R   +GLE L++          W+ E  D    + +FFE +VT Y 
Sbjct: 284 EKMIEDYIKYLGNLRAKGLGLEALYEGFDEIPESMKWVDEYSDPNGVKTDFFEAKVTAYS 343

Query: 118 QGAELKWD 125
           + + ++ D
Sbjct: 344 KSSIIEDD 351


>gi|83649535|ref|YP_437970.1| ribonucleotide reductase subunit beta [Hahella chejuensis KCTC
           2396]
 gi|83637578|gb|ABC33545.1| Ribonucleotide reductase, beta subunit [Hahella chejuensis KCTC
           2396]
          Length = 405

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 52/124 (41%), Positives = 68/124 (54%), Gaps = 3/124 (2%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDE +H  FGI V+ QI  E          +  +T+  EA   E  YAH  + +  +G 
Sbjct: 285 MRDEVMHCAFGIRVVKQIIKEEGVTLDP---KAIKTLWEEAEAAETGYAHFLLKEPILGY 341

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A    +  +FIANRR  Q+ L+  F    N  PW+ E   ++KEKNFFETRVTEYQ GA
Sbjct: 342 TAEDHIEQFRFIANRRAKQLKLDEPFPGAGNALPWLDEQASMRKEKNFFETRVTEYQTGA 401

Query: 121 ELKW 124
            L+W
Sbjct: 402 SLQW 405


>gi|88856487|ref|ZP_01131145.1| ribonucleotide-diphosphate reductase beta subunit [marine
           actinobacterium PHSC20C1]
 gi|88814354|gb|EAR24218.1| ribonucleotide-diphosphate reductase beta subunit [marine
           actinobacterium PHSC20C1]
          Length = 332

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 51/116 (43%), Positives = 75/116 (64%), Gaps = 1/116 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FGI++I  +  ENP + T+EF  + R M+ +A  +E AY H+ +P G +GL
Sbjct: 205 VRDESLHLKFGINLILTVLEENPEIQTEEFADEIRQMILDAVEMEEAYNHDLLPGGILGL 264

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
           NA    QY++++A+RR  ++G EP +K T NP  WM+   D  +  NFFE+  T Y
Sbjct: 265 NANYINQYVKYLADRRLEELGFEPHYKVT-NPAKWMATANDTLELVNFFESTNTSY 319


>gi|297745764|emb|CBI15820.3| unnamed protein product [Vitis vinifera]
          Length = 269

 Score =  142 bits (359), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           R E LH +F   + + ++ + P        QK   ++HEA  +E  +  E +P   +G+ 
Sbjct: 141 RYEGLHCDFACLLYSLLQKQLPW-------QKVHHIVHEAMEIETQFICEALPCALIGMK 193

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A     Y++F+ +R    +G E  +   ENPF WM E I L+   NFF+ R+ +YQ+ + 
Sbjct: 194 ATLMSHYIKFVVDRLLVALGYERKYN-VENPFDWM-EFIFLQGNANFFQRRMGDYQKASI 251

Query: 122 LK 123
           + 
Sbjct: 252 MS 253


>gi|282860353|ref|ZP_06269421.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           bivia JCVIHMP010]
 gi|282586851|gb|EFB92088.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           bivia JCVIHMP010]
          Length = 347

 Score =  142 bits (359), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T E       M+ E    EIA+    +     GL 
Sbjct: 219 RDENTHLWLFRNMIIELKQEEPELFTPEKVAIYEAMMREGVAQEIAWGQYVIGNEVQGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE-NP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y++++ N R   +G + LF+  +  P    W+++  +    + +FFE + T Y 
Sbjct: 279 QQMVSDYIRYLGNLRWKSLGFDYLFEDNQTEPTDMEWVAQYSNANMVKTDFFEAKSTAYA 338

Query: 118 QGAELKWD 125
           +   L  D
Sbjct: 339 KSTALIDD 346


>gi|57239055|ref|YP_180191.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
           ruminantium str. Welgevonden]
 gi|15811135|gb|AAL08816.1|AF308664_1 hypothetical ribonucleoside reductase beta chain [Ehrlichia
           ruminantium]
 gi|57161134|emb|CAH58047.1| putative ribonucleoside-diphosphate reductase beta chain [Ehrlichia
           ruminantium str. Welgevonden]
          Length = 324

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 42/127 (33%), Positives = 69/127 (54%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH    I + N    EN  +W  + +++          LE  + +     G   G
Sbjct: 192 VRDETLHTESIIRLFNTFIQENYEIWDDDLKKELYEACSVIVTLEDEFINLAFACGDVEG 251

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L+A   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +  NFFE RVTEY + 
Sbjct: 252 LSAQEVKEYIRYIANRRLIQLNLEPIYSANKNPLLWLDEILNGVEHTNFFENRVTEYTRA 311

Query: 120 A-ELKWD 125
           A E  W+
Sbjct: 312 ATEGTWE 318


>gi|68171256|ref|ZP_00544659.1| Ribonucleoside-diphosphate reductase [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|67999338|gb|EAM85984.1| Ribonucleoside-diphosphate reductase [Ehrlichia chaffeensis str.
           Sapulpa]
          Length = 294

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH    I + N    EN  +W    +Q+          LE  + +     G   G
Sbjct: 162 VRDETLHTESIIRLFNTFIQENYEIWDDSLKQELYEACRIIVSLEDEFINLAFACGDVEG 221

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L++   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +  NFFE RVTEY + 
Sbjct: 222 LSSKEVKEYIRYIANRRLLQLNLEPIYDTNKNPLLWLDEILNGVEHTNFFENRVTEYARA 281

Query: 120 A-ELKWD 125
           A E  W+
Sbjct: 282 ATEGTWE 288


>gi|90592764|ref|YP_529717.1| RR2B [Agrotis segetum nucleopolyhedrovirus]
 gi|71559214|gb|AAZ38213.1| RR2B [Agrotis segetum nucleopolyhedrovirus]
          Length = 313

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 8/123 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F     N        +  K       +M  EA  +E  +    +P   +G+N
Sbjct: 191 RDEGLHTDFACLYYNT------RVHDKLAPDTVLSMFKEAVAIEKEFFTAALPAALLGMN 244

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A S   Y++F+A+R   Q+     F +  NPF +M+  I L+ + NFFE RV EY++   
Sbjct: 245 AQSMCDYIEFVADRLLVQLHQPKHF-HARNPFEFMN-NISLEGKTNFFEKRVGEYKRFGA 302

Query: 122 LKW 124
              
Sbjct: 303 GDD 305


>gi|260591988|ref|ZP_05857446.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           veroralis F0319]
 gi|260536272|gb|EEX18889.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           veroralis F0319]
          Length = 348

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I ++K E P ++T+E  +    M+ E    EIA+    +     GLN
Sbjct: 220 RDENTHLWLFRSIILELKKEEPDMFTEEKVKVYEDMMREGVRQEIAWGQYVIGNDVQGLN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
           +     Y++++ N R   +G   L+    + P    W+ +  +    + +FFE R T Y 
Sbjct: 280 SQMVSDYIRYLGNLRWSGLGFGFLYPDNQKEPENMKWVGQYSNANMVKTDFFEARSTAYA 339

Query: 118 QGAELKWD 125
           +   L  D
Sbjct: 340 KSTALIDD 347


>gi|58578998|ref|YP_197210.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
           ruminantium str. Welgevonden]
 gi|58417624|emb|CAI26828.1| Ribonucleoside-diphosphate reductase beta chain [Ehrlichia
           ruminantium str. Welgevonden]
          Length = 329

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 42/127 (33%), Positives = 69/127 (54%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH    I + N    EN  +W  + +++          LE  + +     G   G
Sbjct: 197 VRDETLHTESIIRLFNTFIQENYEIWDDDLKKELYEACSVIVTLEDEFINLAFACGDVEG 256

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L+A   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +  NFFE RVTEY + 
Sbjct: 257 LSAQEVKEYIRYIANRRLIQLNLEPIYSANKNPLLWLDEILNGVEHTNFFENRVTEYTRA 316

Query: 120 A-ELKWD 125
           A E  W+
Sbjct: 317 ATEGTWE 323


>gi|317011285|gb|ADU85032.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori SouthAfrica7]
          Length = 341

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLIDEVIEMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKIY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335

Query: 121 ELKWD 125
               D
Sbjct: 336 VSFDD 340


>gi|312599293|gb|ADQ91316.1| hypothetical protein BpV2_149c [Bathycoccus sp. RCC1105 virus BpV2]
          Length = 387

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 68/128 (53%), Gaps = 13/128 (10%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H  F +++ N +K        K   +    ++ +A  +E  +  + +P   +G+N
Sbjct: 266 RDEGMHQEFAVELFNMLK-------NKPSGEIIEEIIRDAVTIEKEFITDALPCSLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ--- 118
           +    +Y++++A+R   Q+G + ++  T+NPF +M E I L  + NFFE RV +Y +   
Sbjct: 319 SSKMSEYIEYVADRLSKQVGHDKIWN-TKNPFDFM-ENISLDGKTNFFEKRVGDYGKMDE 376

Query: 119 -GAELKWD 125
               +++D
Sbjct: 377 DTTSIEFD 384


>gi|51891459|ref|YP_074150.1| ribonucleoside-diphosphate reductase beta subunit [Symbiobacterium
           thermophilum IAM 14863]
 gi|51855148|dbj|BAD39306.1| ribonucleoside-diphosphate reductase beta subunit [Symbiobacterium
           thermophilum IAM 14863]
          Length = 346

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 1/125 (0%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+    +++N ++ E P L+T +     R M+ +A   E+A+A   +     GL+
Sbjct: 220 RDEITHVAVFQNILNGLRQERPQLFTPQLDADLRAMIRQAAEHEMAWAAYCVGNRIQGLS 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQGA 120
               + Y++ +A++R   +G EPL+    NP  W+    +L   + +FFETRVT Y +  
Sbjct: 280 GEVLQGYVKHLADQRARALGFEPLYGNHPNPIKWVESFSNLNQTKADFFETRVTNYAKST 339

Query: 121 ELKWD 125
            +  D
Sbjct: 340 NIDLD 344


>gi|307565004|ref|ZP_07627521.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           amnii CRIS 21A-A]
 gi|307346317|gb|EFN91637.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           amnii CRIS 21A-A]
          Length = 347

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T E       M+ E    EIA+    +     GL 
Sbjct: 219 RDENTHLWLFRNIIVELKQEEPDLFTPEKVAVYEEMMREGVRQEIAWGQYVIGNDVQGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE-NP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y++++ N R   +G + LF+  +  P    W+++  +    + +FFE + T Y 
Sbjct: 279 QQMVYDYIRYLGNLRWKSLGFDYLFEDNQAEPADMQWVAQYSNANMVKTDFFEAKSTAYA 338

Query: 118 QGAELKWD 125
           +   L  D
Sbjct: 339 KSTALIDD 346


>gi|215401441|ref|YP_002332744.1| RR2b [Spodoptera litura nucleopolyhedrovirus II]
 gi|209483982|gb|ACI47415.1| RR2b [Spodoptera litura nucleopolyhedrovirus II]
          Length = 313

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 8/123 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH NF     N    +   + T         M  EA  +E+ +  E +P+  VG+N
Sbjct: 191 RDEGLHTNFACLYYNTRVDQKLDVPT------VSDMFAEAVAIEMEFFAEALPESLVGMN 244

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    +Y++F+A+R   Q+    ++ +TENPF +M+  I L+ + NFFE RV EY++   
Sbjct: 245 AEMMRKYIEFVADRLLVQLKYPKIY-HTENPFEFMN-NISLEGKTNFFEKRVGEYKRFGA 302

Query: 122 LKW 124
            + 
Sbjct: 303 GED 305


>gi|187932511|ref|YP_001884520.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           botulinum B str. Eklund 17B]
 gi|187720664|gb|ACD21885.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum B str. Eklund 17B]
          Length = 344

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 42/126 (33%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ ENP  +T + + + R M+H     EI + H  +     G+N
Sbjct: 218 RDENTHLWLFRNIIKELQSENPESFTADLKNELREMMHIGVENEILWGHYVIGDKIQGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
               E Y++++ N+R  +IGLEPLF  Y ENP  W+  V +    + +FFE + T Y + 
Sbjct: 278 KKLIEDYIKYLGNKRLKEIGLEPLFSGYEENPATWVDVVANSNSVKTDFFEAKSTAYAKV 337

Query: 120 AELKWD 125
           + L  D
Sbjct: 338 STLIDD 343


>gi|134301991|ref|YP_001121960.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|134049768|gb|ABO46839.1| biofunctional glutaredoxin 3 protein/Ribonucleoside-diphosphate
           reductase beta subunit [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 410

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDES+H+     +      ENP++   EF+++   M  +A  LE  +       G   G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 338

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398

Query: 120 A-ELKWD 125
                WD
Sbjct: 399 GLTGSWD 405


>gi|118497575|ref|YP_898625.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. novicida
           U112]
 gi|195536272|ref|ZP_03079279.1| ribonucleoside-diphosphate reductase, beta subunit domain
           [Francisella tularensis subsp. novicida FTE]
 gi|208779374|ref|ZP_03246720.1| ribonucleoside-diphosphate reductase, beta subunit domain
           [Francisella novicida FTG]
 gi|254372936|ref|ZP_04988425.1| hypothetical protein FTCG_00507 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|118423481|gb|ABK89871.1| bifunctional protein: glutaredoxin 3 /ribonucleotide reductase beta
           subunit [Francisella novicida U112]
 gi|151570663|gb|EDN36317.1| hypothetical protein FTCG_00507 [Francisella novicida GA99-3549]
 gi|194372749|gb|EDX27460.1| ribonucleoside-diphosphate reductase, beta subunit domain
           [Francisella tularensis subsp. novicida FTE]
 gi|208745174|gb|EDZ91472.1| ribonucleoside-diphosphate reductase, beta subunit domain
           [Francisella novicida FTG]
 gi|332678274|gb|AEE87403.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Francisella cf. novicida Fx1]
          Length = 410

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDES+H+     +      ENP++   EF+++   M  +A  LE  +       G   G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDKFIELAYELGTIEG 338

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398

Query: 120 A-ELKWD 125
                WD
Sbjct: 399 GLTGSWD 405


>gi|302521843|ref|ZP_07274185.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. SPB78]
 gi|302430738|gb|EFL02554.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. SPB78]
          Length = 345

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 38/126 (30%), Positives = 73/126 (57%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+  + + + + ML  A   E+ +A +    G  G+N
Sbjct: 219 RDETMHMSFAFDVVDTVRKEEPELFDDKLEAEVKEMLAGAVDAELQFARDLCGDGLPGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
             S  +Y+Q +A++R  ++G  P++  + NPF +M E+  +++  NFFE R + YQ    
Sbjct: 279 TESMREYLQCVADQRLVRLGFSPVY-GSSNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 336

Query: 120 AELKWD 125
             + +D
Sbjct: 337 GSVSFD 342


>gi|225873704|ref|YP_002755163.1| ribonucleoside-diphosphate reductase, beta subunit [Acidobacterium
           capsulatum ATCC 51196]
 gi|225791613|gb|ACO31703.1| ribonucleoside-diphosphate reductase, beta subunit [Acidobacterium
           capsulatum ATCC 51196]
          Length = 340

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 2/122 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES HL F  +V+N ++ + P LW  + +     MLHEA   E  +A + +  G  GL+
Sbjct: 214 RDESCHLEFAFEVVNVVRSQEPDLWDAQLEADIVEMLHEAVDAETQFAEDLLSGGVAGLS 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY+ ++A+ R  ++G+ P F   +NPF +M E+ D+++  NFFE RV+ YQ    
Sbjct: 274 VRDMRQYLGYVADSRLQRLGIAPAF-GVKNPFSFM-ELQDVQELTNFFERRVSAYQTAVA 331

Query: 122 LK 123
            +
Sbjct: 332 GE 333


>gi|56707665|ref|YP_169561.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670136|ref|YP_666693.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           FSC198]
 gi|187931834|ref|YP_001891819.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|224456732|ref|ZP_03665205.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254370173|ref|ZP_04986179.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874478|ref|ZP_05247188.1| nrdB, biofunctional protein, glutaredoxin 3
           protein/ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|56604157|emb|CAG45165.1| Biofunctional protein, glutaredoxin 3
           protein/Ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. tularensis SCHU
           S4]
 gi|110320469|emb|CAL08548.1| Biofunctional protein, glutaredoxin 3
           protein/Ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151568417|gb|EDN34071.1| hypothetical protein FTBG_01287 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|187712743|gb|ACD31040.1| bifunctional protein: glutaredoxin 3/ribonucleotide reductase beta
           subunit [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|254840477|gb|EET18913.1| nrdB, biofunctional protein, glutaredoxin 3
           protein/ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282158827|gb|ADA78218.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 410

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDES+H+     +      ENP++   EF+++   M  +A  LE  +       G   G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 338

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398

Query: 120 A-ELKWD 125
                WD
Sbjct: 399 GLTGSWD 405


>gi|318060206|ref|ZP_07978929.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SA3_actG]
 gi|318077113|ref|ZP_07984445.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SA3_actF]
 gi|333024515|ref|ZP_08452579.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptomyces sp. Tu6071]
 gi|332744367|gb|EGJ74808.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptomyces sp. Tu6071]
          Length = 345

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 38/126 (30%), Positives = 73/126 (57%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+  + + + + ML  A   E+ +A +    G  G+N
Sbjct: 219 RDETMHMSFAFDVVDTVRKEEPELFDDKLEAEVKEMLAGAVDAELQFARDLCGDGLPGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
             S  +Y+Q +A++R  ++G  P++  + NPF +M E+  +++  NFFE R + YQ    
Sbjct: 279 TESMREYLQCVADQRLVRLGFSPVY-GSSNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 336

Query: 120 AELKWD 125
             + +D
Sbjct: 337 GSVSFD 342


>gi|254374389|ref|ZP_04989871.1| glutaredoxin [Francisella novicida GA99-3548]
 gi|151572109|gb|EDN37763.1| glutaredoxin [Francisella novicida GA99-3548]
          Length = 410

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDES+H+     +      ENP++   EF+++   M  +A  LE  +       G   G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDKFIELAYELGTIEG 338

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398

Query: 120 A-ELKWD 125
                WD
Sbjct: 399 GLTGSWD 405


>gi|314055235|ref|YP_004063573.1| ribonucleoside-diphosphate reductase small subunit-possible host
           origin [Ostreococcus tauri virus 2]
 gi|313575126|emb|CBI70139.1| ribonucleoside-diphosphate reductase small subunit-possible host
           origin [Ostreococcus tauri virus 2]
          Length = 408

 Score =  141 bits (357), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 33/124 (26%), Positives = 65/124 (52%), Gaps = 12/124 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F +++   ++        +   +    ++ EA  +E  +  + +P   +G+N
Sbjct: 287 RDEGLHQEFAVELFKTLR-------NRPTTETIHAIVKEAVEIEKGFILDALPCNLIGMN 339

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    +Y++++++R   Q+G+ P++   +NPF +M E I L  + NFFE RV +Y    +
Sbjct: 340 SEKMSEYIEYVSDRLLKQVGVPPIWN-AKNPFDFM-ENISLDGKTNFFEKRVGDY---GK 394

Query: 122 LKWD 125
           L  D
Sbjct: 395 LDDD 398


>gi|254369307|ref|ZP_04985319.1| hypothetical protein FTAG_00272 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122257|gb|EDO66397.1| hypothetical protein FTAG_00272 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 410

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDES+H+     +      ENP++   EF+++   M  +A  LE  +       G   G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 338

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398

Query: 120 A-ELKWD 125
                WD
Sbjct: 399 GLTGSWD 405


>gi|73666936|ref|YP_302952.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia canis
           str. Jake]
 gi|72394077|gb|AAZ68354.1| Ribonucleoside-diphosphate reductase [Ehrlichia canis str. Jake]
          Length = 324

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH    I + N    EN  +W    + +          LE  + +     G   G
Sbjct: 192 VRDETLHTESIIRLFNTFVQENYEIWDDSLKHELYEACKIIVSLEDEFINLAFACGDVEG 251

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L+A   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +  NFFE RVTEY + 
Sbjct: 252 LSAKEVKKYIRYIANRRLLQLNLEPIYDANKNPLLWLDEILNGVEHTNFFENRVTEYARA 311

Query: 120 A-ELKWD 125
           A E  W+
Sbjct: 312 ATEGTWE 318


>gi|89256330|ref|YP_513692.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314778|ref|YP_763501.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156502403|ref|YP_001428469.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010840|ref|ZP_02275771.1| ribonucleotide-diphosphate reductase beta subunit [Francisella
           tularensis subsp. holarctica FSC200]
 gi|254367665|ref|ZP_04983686.1| biofunctional protein: glutaredoxin 3
           protein-ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. holarctica 257]
 gi|290952877|ref|ZP_06557498.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295313922|ref|ZP_06804487.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           URFT1]
 gi|89144161|emb|CAJ79423.1| Biofunctional protein, glutaredoxin 3
           protein/Ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. holarctica LVS]
 gi|115129677|gb|ABI82864.1| ribonucleoside-diphosphate reductase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134253476|gb|EBA52570.1| biofunctional protein: glutaredoxin 3
           protein-ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. holarctica 257]
 gi|156253006|gb|ABU61512.1| bifunctional glutaredoxin /ribonucleoside-diphosphate reductase
           beta subunit [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 410

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDES+H+     +      ENP++   EF+++   M  +A  LE  +       G   G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 338

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398

Query: 120 A-ELKWD 125
                WD
Sbjct: 399 GLTGSWD 405


>gi|288928561|ref|ZP_06422408.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
           oral taxon 317 str. F0108]
 gi|288331395|gb|EFC69979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
           oral taxon 317 str. F0108]
          Length = 348

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I+++K E P  +T E  +    M+ E    EIA+    +     GLN
Sbjct: 220 RDENTHLWLFRNIIHEMKKEEPEYFTPEKVKVYEEMMREGVRQEIAWGQYVIGDEVQGLN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
           A     Y++++ N R   +G   L +   E P    W+++  +    + +FFE + T Y 
Sbjct: 280 AQMVNDYIRYLGNMRWRSLGFGNLLEDNIEEPENMRWVAQYANANMVKTDFFEAKSTAYA 339

Query: 118 QGAELKWD 125
           +   ++ D
Sbjct: 340 KSTAIEDD 347


>gi|311898297|dbj|BAJ30705.1| putative ribonucleoside-diphosphate reductase subunit beta
           [Kitasatospora setae KM-6054]
          Length = 339

 Score =  141 bits (356), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 41/126 (32%), Positives = 75/126 (59%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H++F   V++ ++ E P L+  +  ++   ML EA   E+ +A +   +G  G+N
Sbjct: 213 RDESMHMDFAFSVVDTVREEEPDLFDDKMARQVTEMLEEAVEAELQFARDLCGEGLPGMN 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
             S  +Y+Q +A++R  ++GL P+   + NPF +M E+ ++++  NFFE RV+ YQ    
Sbjct: 273 TESMREYLQAVADQRLARLGL-PIRYGSTNPFGFM-ELQNVQELTNFFERRVSAYQIAVE 330

Query: 120 AELKWD 125
             + +D
Sbjct: 331 GSVSFD 336


>gi|304439119|ref|ZP_07399038.1| ribonucleotide-diphosphate reductase beta subunit [Peptoniphilus
           duerdenii ATCC BAA-1640]
 gi|304372478|gb|EFM26065.1| ribonucleotide-diphosphate reductase beta subunit [Peptoniphilus
           duerdenii ATCC BAA-1640]
          Length = 347

 Score =  141 bits (356), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I  +K E P L+T+E  ++ R +L      EIA+    +     GL 
Sbjct: 219 RDENTHLWLFRSIILDLKKEQPELFTEEKVEEYRALLKYGVEEEIAWGKYVIGDDIQGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLK-KEKNFFETRVTEYQ 117
           +   E Y++++ N R   +G EPL++  +       W+++  D+   + +FFE +VT Y 
Sbjct: 279 SKMVEDYIKYLGNLRATNLGFEPLYEGYDKEVESMKWVTQYADINLLKTDFFEAKVTAYS 338

Query: 118 QGAELKWD 125
           + A ++ D
Sbjct: 339 KSAIIEDD 346


>gi|257792030|ref|YP_003182636.1| ribonucleotide-diphosphate reductase subunit beta [Eggerthella
           lenta DSM 2243]
 gi|317488666|ref|ZP_07947206.1| ribonucleotide reductase [Eggerthella sp. 1_3_56FAA]
 gi|257475927|gb|ACV56247.1| Ribonucleoside-diphosphate reductase [Eggerthella lenta DSM 2243]
 gi|316912225|gb|EFV33794.1| ribonucleotide reductase [Eggerthella sp. 1_3_56FAA]
          Length = 347

 Score =  141 bits (356), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ ++K E P L+  E  ++ R M+ E    EI + H  +     GLN
Sbjct: 219 RDENTHLWLFRNILLELKEEEPELFAPELVEEYRAMIKEGCEQEIRWGHYAIGDDVAGLN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y+Q++ N RC Q+G EPL++  E       W+S+  +    + +FFE R T Y 
Sbjct: 279 KQMVTDYIQYLGNLRCAQLGFEPLYEGHEREPESMSWVSQFSNANMIKTDFFEARSTAYA 338

Query: 118 QGAELKWD 125
           + + L  D
Sbjct: 339 KSSALVDD 346


>gi|57339646|gb|AAW49810.1| hypothetical protein FTT0532 [synthetic construct]
          Length = 445

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDES+H+     +      ENP++   EF+++   M  +A  LE  +       G   G
Sbjct: 305 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 364

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 365 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 424

Query: 120 A-ELKWD 125
                WD
Sbjct: 425 GLTGSWD 431


>gi|189184364|ref|YP_001938149.1| ribonucleotide-diphosphate reductase subunit beta [Orientia
           tsutsugamushi str. Ikeda]
 gi|189181135|dbj|BAG40915.1| ribonucleoside-diphosphate reductase beta chain [Orientia
           tsutsugamushi str. Ikeda]
          Length = 359

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH N  I +      E P +WT++ + +           E A+       G   G
Sbjct: 204 VRDETLHTNSIITLFKTFIQEYPEVWTEQLKSRIYEACCTIIHFEDAFIDLAFEVGGVEG 263

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A   ++Y+++IA+RR  Q+GL+  +   +NP  W+ ++++  +  NFFE RVTEY + 
Sbjct: 264 LEARDVKKYIRYIADRRLLQLGLKENYLIEQNPLTWLDQILNGVEHTNFFENRVTEYTRS 323

Query: 120 A-ELKWD 125
           A    WD
Sbjct: 324 ATTGSWD 330


>gi|317014473|gb|ADU81909.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Gambia94/24]
          Length = 341

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKIY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335

Query: 121 ELKWD 125
               D
Sbjct: 336 VSFDD 340


>gi|311696539|gb|ADP99412.1| ribonucleotide-diphosphate reductase beta subunit [marine bacterium
           HP15]
          Length = 352

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 3/124 (2%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H +FG+ V+NQI  E    +     +  R M  E+   E AYA   +    +G 
Sbjct: 232 LRDEAMHFSFGLKVVNQIVEEENITFDP---KAVREMWDESEAAEKAYADYILRDPILGY 288

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A    +  +F+ANRR   +GLE  F   +N  PW+ E   L+KEKNFFETRV EYQ GA
Sbjct: 289 SAEYHSEQFRFVANRRARTVGLEEPFPGAKNVSPWLDEQATLRKEKNFFETRVIEYQTGA 348

Query: 121 ELKW 124
           +L+W
Sbjct: 349 QLEW 352


>gi|288801822|ref|ZP_06407264.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           melaninogenica D18]
 gi|302344783|ref|YP_003813136.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           melaninogenica ATCC 25845]
 gi|288335864|gb|EFC74297.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           melaninogenica D18]
 gi|302149273|gb|ADK95535.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           melaninogenica ATCC 25845]
          Length = 348

 Score =  140 bits (355), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I ++K E P ++T E  +    M+ E    EIA+    +     GLN
Sbjct: 220 RDENTHLWLFRSIILELKKEEPDMFTPEKIKVYEDMMREGVRQEIAWGQYVIGNDVQGLN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
           A     Y++++ N R   +G   L+    + P    W+ +  +    + +FFE + T Y 
Sbjct: 280 AQMVSDYIRYLGNLRWSGLGFGFLYDDNQKEPENMKWVGQYSNANMVKTDFFEAKSTAYA 339

Query: 118 QGAELKWD 125
           +   L  D
Sbjct: 340 KSTALIDD 347


>gi|47208564|emb|CAF96041.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 352

 Score =  140 bits (355), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 37/150 (24%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEI--------------- 46
           RDE LH  F   + + +         K  + + + ++ +A  +E                
Sbjct: 199 RDEGLHCTFACLLYSYLVK-------KPSEDRVKDIITKAVSIEQVGGSYRSMDGNKPNR 251

Query: 47  -------------AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF 93
                         +  E +P   +G+N    +QY++F+A+R    +GL  ++   ENPF
Sbjct: 252 EVLIKDATCFCLQEFLTEALPVDLIGMNRCLMKQYIEFVADRLFADLGLAKMYN-AENPF 310

Query: 94  PWMSEVIDLKKEKNFFETRVTEYQQGAELK 123
            +M E I L+ + NFFE RV EYQ+   + 
Sbjct: 311 DFM-EAISLEGKTNFFEKRVAEYQRFGIMS 339


>gi|296271635|ref|YP_003654266.1| ribonucleoside-diphosphate reductase [Arcobacter nitrofigilis DSM
           7299]
 gi|296095810|gb|ADG91760.1| Ribonucleoside-diphosphate reductase [Arcobacter nitrofigilis DSM
           7299]
          Length = 339

 Score =  140 bits (355), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN  + E P L+T E + K R M  +A  LE A+         +G  
Sbjct: 215 RDEVTHLLLFQNMINSTRKERPDLFTPELEVKVRAMFRKAVELEAAWGAYITQGQILGFT 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
                QY+Q++A++R   +G +P +   ++P PW+        +  NFFE  V  Y +G+
Sbjct: 275 DGIITQYIQYLADKRLDAVGYKPEYN-VKHPIPWVDGYSSFNDQRTNFFEGNVVNYSKGS 333

Query: 121 ELKWD 125
            + +D
Sbjct: 334 -IDFD 337


>gi|308184827|ref|YP_003928960.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori SJM180]
 gi|308060747|gb|ADO02643.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori SJM180]
          Length = 341

 Score =  140 bits (355), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E+++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEVSWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335

Query: 121 ELKWD 125
               D
Sbjct: 336 VSFDD 340


>gi|229827460|ref|ZP_04453529.1| hypothetical protein GCWU000182_02849 [Abiotrophia defectiva ATCC
           49176]
 gi|229788398|gb|EEP24512.1| hypothetical protein GCWU000182_02849 [Abiotrophia defectiva ATCC
           49176]
          Length = 354

 Score =  140 bits (355), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++  ENP ++T E + + R M+   TL EI +         +G+N
Sbjct: 226 RDEITHLVLFQNIIRELMKENPEIFTDELKGELREMVKVGTLNEIEWGQYVTNNEILGIN 285

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
               E+Y+++++N R   IGL   F + TENP  W+    +L   + +FFE +VT Y + 
Sbjct: 286 NELIERYIKYLSNLRLRAIGLPVWFPEITENPMAWIESFSNLNATKTDFFEAKVTNYTKA 345

Query: 120 AELKWD 125
           A   +D
Sbjct: 346 AAFDFD 351


>gi|315586979|gb|ADU41360.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter
           pylori 35A]
          Length = 341

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335

Query: 121 ELKWD 125
               D
Sbjct: 336 VSFDD 340


>gi|302386033|ref|YP_003821855.1| ribonucleotide reductase [Clostridium saccharolyticum WM1]
 gi|302196661|gb|ADL04232.1| ribonucleotide reductase [Clostridium saccharolyticum WM1]
          Length = 368

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ E P L+++E  +  RTM+ E    EIA+    +     GL 
Sbjct: 240 RDENTHLWLFRNIILELEKEEPKLFSRERIEVYRTMIKEGCEQEIAWGCYAIGDEVPGLT 299

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y+ ++ N RC  +G   +++ + + P    W+++  +    + +FFE + T Y 
Sbjct: 300 KEMITDYIMYLGNLRCASLGWGRIYEGHDKEPESMSWVNQFSNANLIKTDFFEAKSTAYA 359

Query: 118 QGAELKWD 125
           + + L  D
Sbjct: 360 KSSALLDD 367


>gi|120556760|ref|YP_961111.1| ribonucleoside-diphosphate reductase [Marinobacter aquaeolei VT8]
 gi|120326609|gb|ABM20924.1| Ribonucleoside-diphosphate reductase [Marinobacter aquaeolei VT8]
          Length = 352

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 3/124 (2%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H +FG+ V+NQI  E          +  R M  E+   E+AYA+  +    +G 
Sbjct: 232 LRDEAMHFSFGLKVVNQILEEEKITLDP---KAVREMWDESEAAEMAYANYVLRDPILGY 288

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A    +  +F+ANRR   +GLE  F   +N  PW+ E   L+KEKNFFETRV EYQ GA
Sbjct: 289 SAEYHSEQFRFVANRRARTVGLEEPFPGAKNVSPWLDEQATLRKEKNFFETRVIEYQTGA 348

Query: 121 ELKW 124
           +L+W
Sbjct: 349 QLEW 352


>gi|148284015|ref|YP_001248105.1| ribonucleotide-diphosphate reductase subunit beta [Orientia
           tsutsugamushi str. Boryong]
 gi|146739454|emb|CAM79093.1| ribonucleoside-diphosphate reductase beta chain [Orientia
           tsutsugamushi str. Boryong]
          Length = 329

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH N  I +      E P +WT++ + +           E A+       G   G
Sbjct: 189 VRDETLHTNSIITLFKTFIQEYPEVWTEQLKSRIYEACCTIIHFEDAFIDLAFEVGGVEG 248

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A   ++Y+++IA+RR  Q+GL+  +   +NP  W+ ++++  +  NFFE RVTEY + 
Sbjct: 249 LEARDVKKYIRYIADRRLLQLGLKENYLIEQNPLTWLDQILNGVEHTNFFENRVTEYTRS 308

Query: 120 A-ELKWD 125
           A    WD
Sbjct: 309 ATTGSWD 315


>gi|58617056|ref|YP_196255.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
           ruminantium str. Gardel]
 gi|58416668|emb|CAI27781.1| Ribonucleoside-diphosphate reductase beta chain [Ehrlichia
           ruminantium str. Gardel]
          Length = 329

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 42/127 (33%), Positives = 69/127 (54%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH    I + N    EN  +W  + +++          LE  + +     G   G
Sbjct: 197 VRDETLHTESIIRLFNTFIQENYEIWDGDLKKELYEACSVIVTLEDEFINLAFACGDVEG 256

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L+A   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +  NFFE RVTEY + 
Sbjct: 257 LSAQEVKEYIRYIANRRLIQLNLEPIYSANKNPLLWLDEILNGVEHTNFFENRVTEYTRA 316

Query: 120 A-ELKWD 125
           A E  W+
Sbjct: 317 ATEGTWE 323


>gi|254779643|ref|YP_003057749.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori B38]
 gi|254001555|emb|CAX29573.1| Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide
           reductase small subunit) [Helicobacter pylori B38]
          Length = 341

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335

Query: 121 ELKWD 125
               D
Sbjct: 336 VSFDD 340


>gi|332184137|gb|AEE26391.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Francisella cf. novicida 3523]
          Length = 410

 Score =  140 bits (354), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDES+H+     +      ENP++   +F+++   M  +A  LE  +       G   G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNQFKKEIYLMASKAVELEDKFIELAYELGTIEG 338

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398

Query: 120 A-ELKWD 125
                WD
Sbjct: 399 GLTGSWD 405


>gi|15612081|ref|NP_223733.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori J99]
 gi|11387046|sp|Q9ZKC3|RIR2_HELPJ RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|4155613|gb|AAD06604.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 BETA CHAIN [Helicobacter
           pylori J99]
 gi|307637755|gb|ADN80205.1| Ribonucleotide reductase of classIa beta subunit [Helicobacter
           pylori 908]
 gi|325996356|gb|ADZ51761.1| Ribonucleotide reductase of class Ia beta subunit [Helicobacter
           pylori 2018]
 gi|325997944|gb|ADZ50152.1| Ribonucleosidase diphosphate reductase beta subunit [Helicobacter
           pylori 2017]
          Length = 341

 Score =  140 bits (354), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335

Query: 121 ELKWD 125
               D
Sbjct: 336 VSFDD 340


>gi|269866693|ref|XP_002652360.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220062665|gb|EED41696.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 211

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   I  +               ++ EA  +E  +  E++P   +G+N
Sbjct: 89  RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 139

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A+R    +G + ++  + NPF +M E I L+ + NFFE R   YQ+G
Sbjct: 140 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 195


>gi|313768358|ref|YP_004062038.1| hypothetical protein MpV1_155c [Micromonas sp. RCC1109 virus MpV1]
 gi|312599054|gb|ADQ91078.1| hypothetical protein MpV1_155c [Micromonas sp. RCC1109 virus MpV1]
          Length = 388

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 34/124 (27%), Positives = 66/124 (53%), Gaps = 12/124 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F +++   ++        K   +   +++ EA  +E  +  + +P   +G+N
Sbjct: 267 RDEGLHQEFAVELFKLLR-------NKPSTETIHSIVKEAVEIEKNFILDALPCNLIGMN 319

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    +Y++++++R   Q+G  P++  ++NPF +M E I L  + NFFE RV +Y    +
Sbjct: 320 SEKMSEYIEYVSDRLLKQVGQPPIWN-SKNPFDFM-ENISLDGKTNFFEKRVGDY---GK 374

Query: 122 LKWD 125
           L  D
Sbjct: 375 LDDD 378


>gi|332297025|ref|YP_004438947.1| ribonucleotide reductase [Treponema brennaborense DSM 12168]
 gi|332180128|gb|AEE15816.1| ribonucleotide reductase [Treponema brennaborense DSM 12168]
          Length = 346

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P ++T+E       ML E    EI +    +     GL 
Sbjct: 218 RDENTHLWLFKNIILELKKERPDMFTEEKVASYAEMLKEGVRQEIEWGEYVIGDDIPGLT 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKY-TENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y+ ++ N R   +   PL+      P    W+S   +    + +FFE R T Y 
Sbjct: 278 RKMVRDYITYLGNLRWTNLDFPPLYPGFDTEPEDMAWVSAYSNANMVKTDFFEARSTAYA 337

Query: 118 QGAELKWD 125
           +   L  D
Sbjct: 338 KSTALVDD 345


>gi|269865627|ref|XP_002651990.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063361|gb|EED42066.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 290

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   I  +               ++ EA  +E  +  E++P   +G+N
Sbjct: 168 RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 218

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A+R    +G + ++  + NPF +M E I L+ + NFFE R T YQ+G
Sbjct: 219 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERRETNYQKG 274


>gi|114568952|ref|YP_755632.1| ribonucleotide-diphosphate reductase subunit beta [Maricaulis maris
           MCS10]
 gi|114339414|gb|ABI64694.1| Ribonucleoside-diphosphate reductase [Maricaulis maris MCS10]
          Length = 345

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 2/122 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDESLH    I + +    E   L T+E +            LE  +       G   G
Sbjct: 197 IRDESLHCEGMIKLFHAFAEETGAL-TQEVKDDITECCRTVVGLEDKFIDLAFEAGDVEG 255

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     + Y+++IA+ R  Q+GL  ++   E+P PW+SE+++  +  NFFE R TEY +G
Sbjct: 256 MTPDDIKTYIRYIADWRLGQLGLPKIYGVKEHPLPWLSEILNGVEHANFFEARATEYSKG 315

Query: 120 AE 121
           A 
Sbjct: 316 AT 317


>gi|94495782|ref|ZP_01302361.1| ribonucleotide reductase beta subunit [Sphingomonas sp. SKA58]
 gi|94424474|gb|EAT09496.1| ribonucleotide reductase beta subunit [Sphingomonas sp. SKA58]
          Length = 350

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 2/122 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH    + + +    E   L T   +     M  +   +E A+       G   G
Sbjct: 189 VRDETLHCEGIVRLFHAFVKERDCL-TASVKDDIMDMCQKTVRIEDAFVDLVFEMGPVPG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     ++Y+++IA+ R  Q+GL+P++   E+P PW++ +++  +  NFFETR TEY + 
Sbjct: 248 MTPKDIKKYVRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANFFETRSTEYSKA 307

Query: 120 AE 121
           A 
Sbjct: 308 AT 309


>gi|271967540|ref|YP_003341736.1| ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM
           43021]
 gi|270510715|gb|ACZ88993.1| Ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM
           43021]
          Length = 331

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 39/126 (30%), Positives = 70/126 (55%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F   V++ ++ E P L+  +   +   M+ EA   E+A+A +    G  G+N
Sbjct: 205 RDESMHMEFAFSVVDTVRAEEPDLFDDKLGAQVTQMIEEAVEAELAFAADLCGDGMSGMN 264

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
                QY++++A++R  ++     +  T NPF +M E+ D+++  NFFE RV+ YQ    
Sbjct: 265 VEQMRQYLEYVADQRLVRLRFPVRY-GTANPFAFM-ELQDVQELANFFERRVSAYQVAVE 322

Query: 120 AELKWD 125
             + +D
Sbjct: 323 GNVSFD 328


>gi|309775830|ref|ZP_07670824.1| ribonucleoside-diphosphate reductase, beta subunit
           [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916368|gb|EFP62114.1| ribonucleoside-diphosphate reductase, beta subunit
           [Erysipelotrichaceae bacterium 3_1_53]
          Length = 347

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E PHL+T+E  Q+ + ML      EI +    +     GL 
Sbjct: 219 RDENTHLWLFRSMILELQKEEPHLFTEELIQEYKDMLRHGVEEEIRWGEYVIGNNIEGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y+ ++ N R + +G   L++  E       W+S   +    + +FFE R + Y 
Sbjct: 279 MEMVSDYIHYLGNLRSNSLGFGSLYEGFESEPKSMEWVSMYANANLIKTDFFEARSSAYA 338

Query: 118 QGAELKWD 125
           + + L  D
Sbjct: 339 KSSALVDD 346


>gi|145596896|ref|YP_001161193.1| ribonucleoside-diphosphate reductase [Salinispora tropica CNB-440]
 gi|145306233|gb|ABP56815.1| Ribonucleoside-diphosphate reductase [Salinispora tropica CNB-440]
          Length = 350

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 42/126 (33%), Positives = 77/126 (61%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F  DV++ ++ E P L+  + +++ + M+ EA   E+ +A + + +G  GL+
Sbjct: 224 RDESMHMAFAFDVVDTVRAEEPDLFDADLERQVKEMVAEAVDCEVQFAEDLLEQGVSGLS 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
                +Y+Q +A+RR   +G+ P++    NPF +M E+ D+++  NFFE RV+ YQ G  
Sbjct: 284 LADMREYLQHVADRRLVTLGIAPMYGSA-NPFAFM-ELQDVQELSNFFERRVSAYQMGVS 341

Query: 120 AELKWD 125
             + +D
Sbjct: 342 GSVTFD 347


>gi|288817346|ref|YP_003431693.1| ribonucleotide reductase beta subunit [Hydrogenobacter thermophilus
           TK-6]
 gi|288786745|dbj|BAI68492.1| ribonucleotide reductase beta subunit [Hydrogenobacter thermophilus
           TK-6]
 gi|308750953|gb|ADO44436.1| ribonucleotide reductase [Hydrogenobacter thermophilus TK-6]
          Length = 342

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+    ++I  IK ENP L+T E ++        AT  EI +         +G+N
Sbjct: 218 RDELTHVTLFRNIIQTIKQENPELFTPELEKWVYEFFKYATDAEIKWGQYVTQNQILGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
               ++Y++++AN R  Q+G +PL+ + TENP  W+ +   +   + +FF+ +   Y + 
Sbjct: 278 NTLIDRYIKYLANLRLTQLGYKPLYPEITENPMKWIDQFRTINDTKTDFFQAKPQTYAKR 337

Query: 120 AELKW 124
           +ELKW
Sbjct: 338 SELKW 342


>gi|319936387|ref|ZP_08010803.1| ribonucleotide-diphosphate reductase subunit beta [Coprobacillus
           sp. 29_1]
 gi|319808502|gb|EFW05054.1| ribonucleotide-diphosphate reductase subunit beta [Coprobacillus
           sp. 29_1]
          Length = 346

 Score =  140 bits (354), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ E P L+T +  +  R M+      EIA+    +     GL 
Sbjct: 218 RDENTHLWLFRNMILELQKEEPDLFTPDKIEVYRDMMKRGVEEEIAWGQYVLGDRIEGLT 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y+ ++ N R   +  EPLF+          W+S   +    + +FFE R + Y 
Sbjct: 278 MKMVSDYIHYLGNFRAQALNFEPLFEDYMQEPESMKWVSIYSNANDIKTDFFEARSSAYA 337

Query: 118 QGAELKWD 125
           + + L+ D
Sbjct: 338 KSSALEDD 345


>gi|317012862|gb|ADU83470.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Lithuania75]
          Length = 341

 Score =  140 bits (354), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335

Query: 121 ELKWD 125
               D
Sbjct: 336 VSFDD 340


>gi|254492407|ref|ZP_05105579.1| ribonucleoside-diphosphate reductase, beta subunit [Methylophaga
           thiooxidans DMS010]
 gi|224462299|gb|EEF78576.1| ribonucleoside-diphosphate reductase, beta subunit [Methylophaga
           thiooxydans DMS010]
          Length = 383

 Score =  140 bits (353), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 50/125 (40%), Positives = 65/125 (52%), Gaps = 3/125 (2%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDE +H +FGI V  QI  E          +K + M  EA   E  YA   +    +G 
Sbjct: 262 MRDEVMHASFGIRVCKQIMKEENITLDP---KKVQQMFEEADAAEETYAGYILRDPILGY 318

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +        ++ ANRR  Q+G E  F   E   PW+ E  +++KEKNFFET+VTEYQ G 
Sbjct: 319 SKEVHHGQFRYTANRRAKQLGFEEPFPGAEATLPWLDEQANMRKEKNFFETKVTEYQTGG 378

Query: 121 ELKWD 125
            LKWD
Sbjct: 379 GLKWD 383


>gi|118474076|ref|YP_891239.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           fetus subsp. fetus 82-40]
 gi|118413302|gb|ABK81722.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           fetus subsp. fetus 82-40]
          Length = 340

 Score =  140 bits (353), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+T E + K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFTSEVEAKIYEMFKKAGDLEIEWGKYITGNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ + R   IGL+ L+   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDDRLTSIGLKKLYN-AKHPIKWVDDFAKFNDQKSNFFESKVTNYSKGS 334

Query: 121 ELKWD 125
            L +D
Sbjct: 335 -LTFD 338


>gi|307295356|ref|ZP_07575195.1| Ribonucleoside-diphosphate reductase [Sphingobium chlorophenolicum
           L-1]
 gi|306878859|gb|EFN10078.1| Ribonucleoside-diphosphate reductase [Sphingobium chlorophenolicum
           L-1]
          Length = 351

 Score =  140 bits (353), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 2/122 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH    I + +    E   L T   +     M  +   +E A+       G   G
Sbjct: 189 VRDETLHCEGIIRLFHAFVKERDCL-TASVKDDIMDMCQKTVRIEDAFIDLVFEMGPVPG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     ++Y+++IA+ R  Q+GL+P++   E+P PW++ +++  +  NFFETR TEY + 
Sbjct: 248 MTPKDIKKYVRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANFFETRATEYSKA 307

Query: 120 AE 121
           A 
Sbjct: 308 AT 309


>gi|109947017|ref|YP_664245.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           acinonychis str. Sheeba]
 gi|109714238|emb|CAJ99246.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter
           acinonychis str. Sheeba]
          Length = 341

 Score =  140 bits (353), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLIDEVIEMFKKAVKIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKIY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335

Query: 121 ELKWD 125
               D
Sbjct: 336 VSFDD 340


>gi|315635423|ref|ZP_07890689.1| ribonucleotide-diphosphate reductase beta subunit [Arcobacter
           butzleri JV22]
 gi|315480181|gb|EFU70848.1| ribonucleotide-diphosphate reductase beta subunit [Arcobacter
           butzleri JV22]
          Length = 339

 Score =  140 bits (353), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+T+E ++  R M  +A  LE ++         +G  
Sbjct: 215 RDEVTHLLLFQNMINSVRKERPDLFTQELEETVRAMFRKAVDLEASWGAYITQGQILGFT 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
                QY++++A+RR   +G +  +   ++P PW+        +  NFFE  V  Y +G+
Sbjct: 275 DGIIRQYIEYLADRRLEAVGYKAEY-GVKHPIPWVDGYASFNDQRTNFFEGNVVNYSKGS 333

Query: 121 ELKWD 125
            + +D
Sbjct: 334 -IDFD 337


>gi|313900116|ref|ZP_07833616.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
           HGF2]
 gi|312955168|gb|EFR36836.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
           HGF2]
          Length = 347

 Score =  140 bits (353), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L+T+E  ++ + ML      EI +    +     GL 
Sbjct: 219 RDENTHLWLFRSMILELQKEEPQLFTEELIEEYKDMLRHGVEEEIRWGEYVIGNHIEGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y+ ++ N R + +G   L+   EN      W+S   +    + +FFE R + Y 
Sbjct: 279 MEMVSDYIHYLGNLRSNSLGFGSLYDGFENEPKSMEWVSMYANANLIKTDFFEARSSAYA 338

Query: 118 QGAELKWD 125
           + + L  D
Sbjct: 339 KSSALVDD 346


>gi|229816571|ref|ZP_04446870.1| hypothetical protein COLINT_03629 [Collinsella intestinalis DSM
           13280]
 gi|229807906|gb|EEP43709.1| hypothetical protein COLINT_03629 [Collinsella intestinalis DSM
           13280]
          Length = 352

 Score =  140 bits (353), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L++ E     R ML E    EIA+    +     GL 
Sbjct: 224 RDENTHLWLFRSIILELQKEEPQLFSNENVTMLREMLEEGVRQEIAWGRYVLGDAIPGLT 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
               E Y++++ N R   +G   L++ Y   P    W+S+  +    + +FFE + T Y 
Sbjct: 284 GDMVEGYIKYLGNLRWSSLGFGQLYEGYRTEPADMAWVSQYSNANMVKTDFFEAKSTAYA 343

Query: 118 QGAELKWD 125
           +   L  D
Sbjct: 344 KSTALVDD 351


>gi|165969130|ref|YP_001651030.1| ribonucleotide reductase small subunit 2 [Orgyia leucostigma NPV]
 gi|164663626|gb|ABY65846.1| ribonucleotide reductase small subunit 2 [Orgyia leucostigma NPV]
          Length = 339

 Score =  140 bits (353), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 6/123 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH NF     N+   E   + + E       M  EA  +E  +    +P   +G+N
Sbjct: 215 RDEGLHTNFACLYYNEYIDERDKMSSAE----ILDMFVEAVNIEKEFFTSALPCDLLGMN 270

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           + +  +Y++F+A+R   ++     F  T NPF +M+  I L+ + NFFE RV EY++   
Sbjct: 271 SRAMCEYIEFVADRLLTELQQPKHFN-TPNPFNFMN-NISLEGKTNFFERRVGEYKRFGA 328

Query: 122 LKW 124
              
Sbjct: 329 GAD 331


>gi|188527870|ref|YP_001910557.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Shi470]
 gi|188144110|gb|ACD48527.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Shi470]
 gi|308063873|gb|ADO05760.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Sat464]
          Length = 341

 Score =  140 bits (353), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335

Query: 121 ELKWD 125
               D
Sbjct: 336 VSFDD 340


>gi|296282225|ref|ZP_06860223.1| ribonucleotide-diphosphate reductase subunit beta [Citromicrobium
           bathyomarinum JL354]
          Length = 354

 Score =  140 bits (353), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 2/122 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDESLH    I + ++   E    +TK  ++    +  ++  LE  +       G   G
Sbjct: 189 VRDESLHCEGIIRLFHEFVRER-DCYTKAVKEDIIDICQKSVRLEDNFIDLAFEMGPVSG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           + A   ++Y+++IA+ R  Q+GL+P++   E+P PW++ +++  +  NFFE R TEY +G
Sbjct: 248 MTAKEIKKYIRYIADWRLGQLGLQPIYMIDEHPLPWLTPLLNGVEHANFFEQRATEYSKG 307

Query: 120 AE 121
           A 
Sbjct: 308 AT 309


>gi|317009697|gb|ADU80277.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori India7]
          Length = 341

 Score =  140 bits (353), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  +         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEALWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335

Query: 121 ELKWD 125
               D
Sbjct: 336 VSFDD 340


>gi|56551339|ref|YP_162178.1| ribonucleotide-diphosphate reductase subunit beta [Zymomonas
           mobilis subsp. mobilis ZM4]
 gi|241760992|ref|ZP_04759081.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|260753042|ref|YP_003225935.1| ribonucleotide-diphosphate reductase subunit beta [Zymomonas
           mobilis subsp. mobilis NCIMB 11163]
 gi|56542913|gb|AAV89067.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241374611|gb|EER64072.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|258552405|gb|ACV75351.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 345

 Score =  140 bits (353), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 2/122 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDESLH    I + +    E   L TK+ +     +      +E A+       G   G
Sbjct: 189 VRDESLHCEGIIRLFHTFCQERQCL-TKQVKDDILNICQRTVRIEDAFIDLVFEMGPVEG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     ++Y+++IA+ R  Q+GL P++   E+P PW++ +++  +  NFFETR TEY + 
Sbjct: 248 MTPKEIKKYIRYIADWRLGQLGLSPIYMIEEHPLPWLTPLLNGVEHANFFETRSTEYSKA 307

Query: 120 AE 121
           A 
Sbjct: 308 AT 309


>gi|208434985|ref|YP_002266651.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter
           pylori G27]
 gi|208432914|gb|ACI27785.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter
           pylori G27]
          Length = 341

 Score =  139 bits (352), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  +         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEALWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335

Query: 121 ELKWD 125
               D
Sbjct: 336 VSFDD 340


>gi|228861726|ref|YP_002854746.1| Rr2 [Euproctis pseudoconspersa nucleopolyhedrovirus]
 gi|226425174|gb|ACO53586.1| Rr2 [Euproctis pseudoconspersa nucleopolyhedrovirus]
          Length = 339

 Score =  139 bits (352), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 6/123 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH NF     N+   E      K   ++   M  EA  +E  +    +P   +G+N
Sbjct: 215 RDEGLHTNFACLYYNEYIPE----HDKLSSERILDMFIEAVEIEKEFFKTALPCSLLGMN 270

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y++F+A+R    +     F    NPF +M+  I ++ + NFFE RV EY++   
Sbjct: 271 TESMCRYIEFVADRLLVDLNQPKHF-MASNPFNFMT-NISMEGKTNFFERRVGEYRRFGA 328

Query: 122 LKW 124
            + 
Sbjct: 329 GQD 331


>gi|291303011|ref|YP_003514289.1| Ribonucleoside-diphosphate reductase [Stackebrandtia nassauensis
           DSM 44728]
 gi|290572231|gb|ADD45196.1| Ribonucleoside-diphosphate reductase [Stackebrandtia nassauensis
           DSM 44728]
          Length = 338

 Score =  139 bits (352), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 37/124 (29%), Positives = 69/124 (55%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H+NF   V++ ++ E P L+  E  +    M+ EA   E+ +A +   +G  G+ 
Sbjct: 212 RDESCHMNFAFSVVDVVRNEEPELFDDELTEAVTRMIEEAVAAELQFARDLCGEGMPGMT 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               + Y++++A++R  ++G+   +  ++NPF +M+ + D+++  NFFE R T YQ    
Sbjct: 272 VNDMKSYLEYVADQRLTRLGMPVRY-GSKNPFGFMA-LQDVQELTNFFERRPTAYQVAVG 329

Query: 122 LKWD 125
              D
Sbjct: 330 GTVD 333


>gi|325268390|ref|ZP_08135022.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella
           multiformis DSM 16608]
 gi|324989244|gb|EGC21195.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella
           multiformis DSM 16608]
          Length = 348

 Score =  139 bits (352), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I ++K E P ++T +  +    M+ E    EIA+    +     GLN
Sbjct: 220 RDENTHLWLFRSIILELKKEEPDMFTPDRIKVYEDMMREGVRQEIAWGQYVIGNDVQGLN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y++++ N R   +G   L+    + P    W+ +  +    + +FFE + T Y 
Sbjct: 280 EQMVSDYIRYLGNLRWSGLGFGFLYDDNRKEPENMKWVGQYSNANMVKTDFFEAKSTAYA 339

Query: 118 QGAELKWD 125
           +   L  D
Sbjct: 340 KSTALADD 347


>gi|217032591|ref|ZP_03438080.1| hypothetical protein HPB128_159g17 [Helicobacter pylori B128]
 gi|298735909|ref|YP_003728434.1| ribonucleoside-diphosphate reductase subunit beta [Helicobacter
           pylori B8]
 gi|216945727|gb|EEC24352.1| hypothetical protein HPB128_159g17 [Helicobacter pylori B128]
 gi|298355098|emb|CBI65970.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter
           pylori B8]
          Length = 341

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  +         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEALWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335

Query: 121 ELKWD 125
               D
Sbjct: 336 VSFDD 340


>gi|149375674|ref|ZP_01893443.1| Ribonucleotide reductase, beta subunit [Marinobacter algicola
           DG893]
 gi|149360076|gb|EDM48531.1| Ribonucleotide reductase, beta subunit [Marinobacter algicola
           DG893]
          Length = 352

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 3/124 (2%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H +FG+ V+NQI  E          +  R M  E+   E AYA+  +    +G 
Sbjct: 232 LRDEAMHFSFGLKVVNQILEEENITLDP---KAVRDMWDESEAAETAYANYILRDPILGY 288

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A    +  +F+ANRR   +GLE  F   +N  PW+ E   L+KEKNFFETRV EYQ GA
Sbjct: 289 SAQYHSEQFRFVANRRARTVGLEEPFPGAKNVSPWLDEQATLRKEKNFFETRVIEYQTGA 348

Query: 121 ELKW 124
           +L+W
Sbjct: 349 QLEW 352


>gi|297380266|gb|ADI35153.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori v225d]
 gi|308062365|gb|ADO04253.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Cuz20]
 gi|317180823|dbj|BAJ58609.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori F32]
 gi|332673890|gb|AEE70707.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter
           pylori 83]
          Length = 341

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335

Query: 121 ELKWD 125
               D
Sbjct: 336 VSFDD 340


>gi|317178607|dbj|BAJ56395.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori F30]
          Length = 341

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335

Query: 121 ELKWD 125
               D
Sbjct: 336 VSFDD 340


>gi|261838422|gb|ACX98188.1| ribonucleoside-diphosphate reductase 1 beta subunit [Helicobacter
           pylori 51]
          Length = 341

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335

Query: 121 ELKWD 125
               D
Sbjct: 336 VSFDD 340


>gi|115378653|ref|ZP_01465803.1| ribonucleoside-diphosphate reductase, beta subunit [Stigmatella
           aurantiaca DW4/3-1]
 gi|115364319|gb|EAU63404.1| ribonucleoside-diphosphate reductase, beta subunit [Stigmatella
           aurantiaca DW4/3-1]
          Length = 288

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 2/118 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H+ F  + I   + E P L+    Q     M+ EA   E  +A + +  G  GL+
Sbjct: 158 RDESTHMAFAFEAIRVARQEEPDLFDARMQADVVAMMREAVECETLFAQDLLSGGVAGLS 217

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++++A++R   +GL P+F+  +N  P+M  + D+++  NFFE RV+ YQ  
Sbjct: 218 VQEMRQYLEYVADQRLTMLGLAPVFR-VKNSLPFMD-LQDVQELTNFFERRVSAYQVA 273


>gi|308183194|ref|YP_003927321.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori PeCan4]
 gi|308065379|gb|ADO07271.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori PeCan4]
          Length = 341

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335

Query: 121 ELKWD 125
               D
Sbjct: 336 VSFDD 340


>gi|269865926|ref|XP_002652096.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063168|gb|EED41960.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 330

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   I  +               ++ EA  +E  +  E++P   +G+N
Sbjct: 219 RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 269

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A+R    +G + ++  + NPF +M E I L+ + NFFE R   YQ+G
Sbjct: 270 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 325


>gi|269864946|ref|XP_002651751.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|269865852|ref|XP_002652068.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|269866233|ref|XP_002652201.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220062966|gb|EED41855.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063214|gb|EED41988.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063944|gb|EED42305.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 226

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   I  +               ++ EA  +E  +  E++P   +G+N
Sbjct: 104 RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 154

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A+R    +G + ++  + NPF +M E I L+ + NFFE R   YQ+G
Sbjct: 155 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 210


>gi|210135249|ref|YP_002301688.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori P12]
 gi|210133217|gb|ACJ08208.1| ribonucleoside-diphosphate reductase 1 beta subunit [Helicobacter
           pylori P12]
          Length = 341

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335

Query: 121 ELKWD 125
               D
Sbjct: 336 VSFDD 340


>gi|9634266|ref|NP_037805.1| ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera
           exigua MNPV]
 gi|6960505|gb|AAF33575.1|AF169823_45 ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera
           exigua MNPV]
          Length = 313

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 8/123 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH NF     N    +     T         M  EA  +E+ +  E +P+  VG+N
Sbjct: 191 RDEGLHTNFACLYYNTRVDQKLDAPT------VNDMFSEAVAIEMEFFAEALPESLVGMN 244

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    +Y++F+A+R   Q+    ++ YTENPF +M+  I L+ + NFFE RV EY++   
Sbjct: 245 ANMMRKYIEFVADRLLVQLKYPKMY-YTENPFEFMN-NISLEGKTNFFEKRVGEYKRFGA 302

Query: 122 LKW 124
            + 
Sbjct: 303 GED 305


>gi|108763495|ref|YP_633213.1| ribonucleoside-diphosphate reductase subunit beta [Myxococcus
           xanthus DK 1622]
 gi|108467375|gb|ABF92560.1| ribonucleoside-diphosphate reductase, beta subunit [Myxococcus
           xanthus DK 1622]
          Length = 349

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 38/118 (32%), Positives = 66/118 (55%), Gaps = 2/118 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H+ F  + I   + E P L+  + ++    ML EA   E  +A + +  G +GL+
Sbjct: 219 RDESAHMAFAFESIQVARKEEPDLFDAQMERDVVAMLREAVECETQFAQDLLSGGVMGLS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                 Y++++A++R   +G+ P+F  T+NP  +M  + D+++  NFFE RV+ YQ  
Sbjct: 279 VQDMRGYLEYVADQRLQMLGMTPVF-GTKNPLHFMD-LQDVQELTNFFERRVSSYQVA 334


>gi|225568010|ref|ZP_03777035.1| hypothetical protein CLOHYLEM_04083 [Clostridium hylemonae DSM
           15053]
 gi|225163184|gb|EEG75803.1| hypothetical protein CLOHYLEM_04083 [Clostridium hylemonae DSM
           15053]
          Length = 355

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     ++ ++K E P L+  E  +  R M+ E    EI + H  +     GL 
Sbjct: 227 RDENTHLWLFRSMLQELKKEEPQLFAAEDIKMYRQMIREGCEQEIRWGHYVIGDKIQGLT 286

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y++++ N RC  +G E +++          W+ +  +    + +FFE + T Y 
Sbjct: 287 KDMITSYIRYLGNLRCTGLGFERIYEGYDTIPESMRWVEQYSNANLIKTDFFEAKSTAYA 346

Query: 118 QGAELKWD 125
           + + L  D
Sbjct: 347 KSSALVDD 354


>gi|313844096|ref|YP_004061759.1| hypothetical protein OlV1_126 [Ostreococcus lucimarinus virus OlV1]
 gi|312599481|gb|ADQ91503.1| hypothetical protein OlV1_126 [Ostreococcus lucimarinus virus OlV1]
          Length = 408

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 34/117 (29%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F +++   ++I       K   +   +++ EA  +E  +  + +P   +G+N
Sbjct: 287 RDEGLHQEFAVELFKLLRI-------KPTTETIHSIVKEAVEIEKGFILDALPCALIGMN 339

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           +    +Y++++++R   QIG+ P++  ++NPF +M E I L  + NFFE RV +Y +
Sbjct: 340 SEKMSEYIEYVSDRLLKQIGVPPIWN-SKNPFDFM-ENISLDGKTNFFEKRVGDYGK 394


>gi|325859841|ref|ZP_08172971.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           denticola CRIS 18C-A]
 gi|325482767|gb|EGC85770.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           denticola CRIS 18C-A]
          Length = 348

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I ++K E P ++T +  +    M+ E    EIA+    +     GLN
Sbjct: 220 RDENTHLWLFRSIILELKKEEPDMFTPDRIKVYEDMMREGVRQEIAWGQYVIGNDVQGLN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y++++ N R   +G   L+    + P    W+ +  +    + +FFE + T Y 
Sbjct: 280 EQMVSDYIRYLGNLRWSGLGFGFLYDDNRKEPENMKWVGQYSNANMVKTDFFEAKSTAYA 339

Query: 118 QGAELKWD 125
           +   L  D
Sbjct: 340 KSTALVDD 347


>gi|217034470|ref|ZP_03439882.1| hypothetical protein HP9810_890g15 [Helicobacter pylori 98-10]
 gi|216943072|gb|EEC22549.1| hypothetical protein HP9810_890g15 [Helicobacter pylori 98-10]
 gi|317177841|dbj|BAJ55630.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori F16]
          Length = 341

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  +         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIESLWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335

Query: 121 ELKWD 125
               D
Sbjct: 336 VSFDD 340


>gi|261839822|gb|ACX99587.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori 52]
          Length = 341

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  +         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335

Query: 121 ELKWD 125
               D
Sbjct: 336 VSFDD 340


>gi|108563454|ref|YP_627770.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori HPAG1]
 gi|107837227|gb|ABF85096.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter
           pylori HPAG1]
          Length = 341

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  +         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335

Query: 121 ELKWD 125
               D
Sbjct: 336 VSFDD 340


>gi|330814259|ref|YP_004358498.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487354|gb|AEA81759.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Candidatus Pelagibacter sp. IMCC9063]
          Length = 345

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 1/122 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH N  I + N    ENP L     +++           E A+       G   G
Sbjct: 212 VRDETLHCNSMIKIFNTFCDENPGLLDDSLKKEIYEACSTIIEHEDAFIDLAFEMGDIEG 271

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A   ++Y+++IANRR  Q+ L  L++  ENP  W+ ++++  +  NFFE R TEY + 
Sbjct: 272 LKAEEVKKYIRWIANRRLAQLRLNDLYEVKENPLTWLDDMLNGVEHMNFFEGRATEYSKA 331

Query: 120 AE 121
           + 
Sbjct: 332 ST 333


>gi|322378346|ref|ZP_08052803.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           suis HS1]
 gi|322379688|ref|ZP_08054002.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           suis HS5]
 gi|321147887|gb|EFX42473.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           suis HS5]
 gi|321149232|gb|EFX43675.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           suis HS1]
          Length = 342

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL+   ++IN ++ E   L++ E   +   M  +A  LE A+         + L+
Sbjct: 218 RDELTHLHLFQNMINTLRKERSDLFSPELIAEVNEMFKQAVDLESAWGAYITQGEMLDLS 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
                 Y +++A+ R   +GL  L+  ++NP  W+ +  +      NFFE +V+ Y +G+
Sbjct: 278 PQILRTYTEYLADTRLAVVGLPKLYN-SQNPIKWVDQFANFNSHRSNFFEAKVSNYSKGS 336


>gi|157736292|ref|YP_001488975.1| ribonucleotide-diphosphate reductase subunit beta [Arcobacter
           butzleri RM4018]
 gi|157698146|gb|ABV66306.1| ribonucleoside-diphosphate reductase, beta chain [Arcobacter
           butzleri RM4018]
          Length = 339

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+T E ++  R M  +A  LE ++         +G  
Sbjct: 215 RDEVTHLLLFQNMINSVRKERPDLFTSELEETVRAMFRKAVDLEASWGAYITQGQILGFT 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
                QY++++A+RR   +G +  +   ++P PW+        +  NFFE  V  Y +G+
Sbjct: 275 DGIIRQYIEYLADRRLEAVGYKAEY-GVKHPIPWVDGYASFNDQRTNFFEGNVVNYSKGS 333

Query: 121 ELKWD 125
            + +D
Sbjct: 334 -IDFD 337


>gi|207092116|ref|ZP_03239903.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori HPKX_438_AG0C1]
          Length = 341

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  +         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335

Query: 121 ELKWD 125
               D
Sbjct: 336 VSFDD 340


>gi|15644992|ref|NP_207162.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori 26695]
 gi|2500210|sp|P55983|RIR2_HELPY RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2313466|gb|AAD07432.1| ribonucleoside diphosphate reductase, beta subunit (nrdB)
           [Helicobacter pylori 26695]
          Length = 341

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  +         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335

Query: 121 ELKWD 125
               D
Sbjct: 336 VSFDD 340


>gi|103487260|ref|YP_616821.1| ribonucleotide-diphosphate reductase subunit beta [Sphingopyxis
           alaskensis RB2256]
 gi|98977337|gb|ABF53488.1| Ribonucleoside-diphosphate reductase [Sphingopyxis alaskensis
           RB2256]
          Length = 354

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 2/122 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDESLH    I + +    E   L TK  ++       +   LE A+      +G   G
Sbjct: 189 IRDESLHCEGIIKLFHAFTKERGCL-TKAVKEDIIDTCQKTVRLEDAFIDLAFEQGPVPG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     ++Y+++IA+ R  Q+G +P++   E+P PW++ +++  +  NFFETR TEY +G
Sbjct: 248 MTPKEIKRYIRYIADWRLGQLGFQPIYMIDEHPLPWLAPLLNGVEHANFFETRATEYSKG 307

Query: 120 AE 121
           A 
Sbjct: 308 AT 309


>gi|317182342|dbj|BAJ60126.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori F57]
          Length = 341

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  +         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335

Query: 121 ELKWD 125
               D
Sbjct: 336 VSFDD 340


>gi|322510876|gb|ADX06189.1| putative ribonucleotide reductase small subunit [Organic Lake
           phycodnavirus 2]
          Length = 324

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 39/116 (33%), Positives = 71/116 (61%), Gaps = 9/116 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+LH  F + + N+++        K  ++K R ++ EA  +E  +  + +P   +G+N
Sbjct: 201 RDEALHTEFAVYLYNRLEK-------KLNKKKVREIIEEAVTIEKEFIVDALPCRMIGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
           +    QY++F+A+R   Q+G + ++  T NPF +M E+I L+++ NFFE+RV+EY 
Sbjct: 254 SELMTQYIEFVADRLMMQLGCDVIY-ATNNPFDFM-ELISLEQKTNFFESRVSEYS 307


>gi|225712968|gb|ACO12330.1| Ribonucleoside-diphosphate reductase small chain [Lepeophtheirus
           salmonis]
          Length = 335

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H +F   + +       HL  K   +    ++ E   +E  +  +++P G +G+N
Sbjct: 209 RDEGSHTDFACLLYS-------HLENKLDPKYVLQIIKEGVEIEKEFVADSLPVGLIGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           A   + Y++F+A+     + +E  + +T+NPF +M   I +  + NFF+ RV+EYQ+
Sbjct: 262 AKMMKNYIEFVADNLLENLNIEK-YYHTKNPFNFMD-NISMTGKTNFFDKRVSEYQR 316


>gi|269864629|ref|XP_002651641.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220064151|gb|EED42415.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 277

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   I  +               ++ EA  +E  +  E++P   +G+N
Sbjct: 155 RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 205

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A+R    +G + ++  + NPF +M E I L+ + NFFE R   YQ+G
Sbjct: 206 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 261


>gi|310823070|ref|YP_003955428.1| ribonucleoside-diphosphate reductase subunit beta [Stigmatella
           aurantiaca DW4/3-1]
 gi|309396142|gb|ADO73601.1| Ribonucleoside-diphosphate reductase, beta subunit [Stigmatella
           aurantiaca DW4/3-1]
          Length = 336

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 2/118 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H+ F  + I   + E P L+    Q     M+ EA   E  +A + +  G  GL+
Sbjct: 206 RDESTHMAFAFEAIRVARQEEPDLFDARMQADVVAMMREAVECETLFAQDLLSGGVAGLS 265

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++++A++R   +GL P+F+  +N  P+M  + D+++  NFFE RV+ YQ  
Sbjct: 266 VQEMRQYLEYVADQRLTMLGLAPVFR-VKNSLPFMD-LQDVQELTNFFERRVSAYQVA 321


>gi|42523460|ref|NP_968840.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio
           bacteriovorus HD100]
 gi|39575666|emb|CAE79833.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio
           bacteriovorus HD100]
          Length = 336

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 42/126 (33%), Positives = 74/126 (58%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F I+V+   + E P L+ ++ +     ML +A   E+ +AH+ +  G  GL+
Sbjct: 210 RDESMHMAFAIEVVKTARKEEPELFNQQMEDMVVQMLEDAIECEMEFAHDVLNLGVAGLS 269

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
           A    QY+++ A++R   + + P +   +NPF +M E+ D+++  NFFE RV+ YQ G  
Sbjct: 270 AKDMRQYLEYCADQRLESLNIAPRYN-VKNPFIFM-ELQDMQELANFFERRVSAYQTGVS 327

Query: 120 AELKWD 125
             + +D
Sbjct: 328 GAVAFD 333


>gi|167648664|ref|YP_001686327.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter sp.
           K31]
 gi|167351094|gb|ABZ73829.1| Ribonucleoside-diphosphate reductase [Caulobacter sp. K31]
          Length = 346

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 2/122 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDESLH    I + +    E     T E             ++E A+       G   G
Sbjct: 197 IRDESLHCEGIIKLYHAFNAETK-CVTPEVAADIVECCKSVVIMEDAFIDLAFEAGEIQG 255

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     +QY++FIA+ R  Q+ L  ++   ENP PW+  ++   +  NFFE R TEY + 
Sbjct: 256 MTPHDIKQYIRFIADWRLRQLHLPEVYGIKENPLPWLQSLLSGVEHANFFEARATEYSKA 315

Query: 120 AE 121
           A 
Sbjct: 316 AT 317


>gi|299472857|emb|CBN80426.1| EsV-1-128 [Ectocarpus siliculosus]
          Length = 419

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH    + +   ++ + P       Q++   +   A  +E  +    +P   +G++
Sbjct: 294 RDEGLHATASVLIYKHLRNKLP-------QERVHEIFEHAVSVECEFISSALPVALIGIS 346

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y++F+A+   +Q+G + ++    NPF WM  +I L+ + NFFE RV EY +   
Sbjct: 347 EKSMTEYIKFVADYWLNQLGYDKVYNCA-NPFEWMD-MISLQGKTNFFENRVAEYSKPGV 404

Query: 122 L 122
           L
Sbjct: 405 L 405


>gi|73979723|ref|XP_856346.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase M2 chain
           (Ribonucleotide reductase small chain) isoform 3 [Canis
           familiaris]
          Length = 381

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 22/122 (18%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 269 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIIINAVRIEQEFLTEALPVKLIGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+                 ENPF +M E I L+ + NFFE RV EYQ+   
Sbjct: 322 CTLMKQYIEFVFR--------------VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 366

Query: 122 LK 123
           + 
Sbjct: 367 MS 368


>gi|269863618|ref|XP_002651286.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220064807|gb|EED42770.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 332

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   I  +               ++ EA  +E  +  E++P   +G+N
Sbjct: 219 RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 269

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A+R    +G + ++  + NPF +M E I L+ + NFFE R   YQ+G
Sbjct: 270 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 325


>gi|153875510|ref|ZP_02003277.1| ribonucleotide-diphosphate reductase beta subunit [Beggiatoa sp.
           PS]
 gi|152068026|gb|EDN66723.1| ribonucleotide-diphosphate reductase beta subunit [Beggiatoa sp.
           PS]
          Length = 374

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 57/125 (45%), Positives = 81/125 (64%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVGL 60
           RDE+LH + G+ +I QI  EN  LW    Q++SR ++ EA  LE  YAH +MP+ G VGL
Sbjct: 251 RDENLHSSNGLWLIKQIIQENHELWDSTMQERSRAIVSEAVKLETDYAHASMPEGGIVGL 310

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
              +  ++  F+A+  C  +G++PLF+  E+P PW+SE  +L  E NFFE RV EYQ G+
Sbjct: 311 PVKTYIKFSHFVADNICKNLGIKPLFRVREHPMPWISEY-ELNHEVNFFEGRVREYQTGS 369

Query: 121 ELKWD 125
           +L WD
Sbjct: 370 QLTWD 374


>gi|289425969|ref|ZP_06427716.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes SK187]
 gi|289153512|gb|EFD02226.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes SK187]
 gi|313763766|gb|EFS35130.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL013PA1]
 gi|313802998|gb|EFS44206.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL110PA2]
 gi|313816916|gb|EFS54630.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL059PA1]
 gi|313829718|gb|EFS67432.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL063PA2]
 gi|313839374|gb|EFS77088.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL086PA1]
 gi|314916474|gb|EFS80305.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL005PA4]
 gi|314932316|gb|EFS96147.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL067PA1]
 gi|314956590|gb|EFT00842.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL027PA1]
 gi|314959472|gb|EFT03574.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL002PA1]
 gi|314964864|gb|EFT08964.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL082PA1]
 gi|314968630|gb|EFT12728.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL037PA1]
 gi|315079174|gb|EFT51177.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL053PA2]
 gi|315100241|gb|EFT72217.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL059PA2]
 gi|315102565|gb|EFT74541.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL046PA1]
 gi|315109517|gb|EFT81493.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL030PA2]
 gi|327455890|gb|EGF02545.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL087PA3]
 gi|327458042|gb|EGF04697.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL083PA2]
 gi|328757204|gb|EGF70820.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL087PA1]
 gi|328757585|gb|EGF71201.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL025PA2]
          Length = 328

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 1/120 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +P+G +G+
Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGILGM 263

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA     Y++++A+RR  ++G EP ++   NP  WM+   D  +  NFFE   T Y+  A
Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEYRVA-NPAKWMATANDTLQVVNFFEATNTSYEVNA 322


>gi|314918862|gb|EFS82693.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL050PA1]
 gi|314921071|gb|EFS84902.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL050PA3]
          Length = 328

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 1/120 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +P+G +G+
Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGILGM 263

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA     Y++++A+RR  ++G EP ++   NP  WM+   D  +  NFFE   T Y+  A
Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEYRVA-NPAKWMATANDTLQVVNFFEATNTSYEVNA 322


>gi|294013210|ref|YP_003546670.1| ribonucleoside-diphosphate reductase beta chain [Sphingobium
           japonicum UT26S]
 gi|292676540|dbj|BAI98058.1| ribonucleoside-diphosphate reductase beta chain [Sphingobium
           japonicum UT26S]
          Length = 351

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 2/122 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH    + + +    E   L T   +     M  +   +E A+       G   G
Sbjct: 189 VRDETLHCEGIVRLFHAFVKERDCL-TASVKDDIMDMCQKTVRIEDAFVDLVFEMGPVPG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     ++Y+++IA+ R  Q+GL+P++   E+P PW++ +++  +  NFFETR TEY + 
Sbjct: 248 MTPKDIKKYVRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANFFETRATEYSKA 307

Query: 120 AE 121
           A 
Sbjct: 308 AT 309


>gi|167756571|ref|ZP_02428698.1| hypothetical protein CLORAM_02108 [Clostridium ramosum DSM 1402]
 gi|237733862|ref|ZP_04564343.1| ribonucleotide-diphosphate reductase subunit beta [Mollicutes
           bacterium D7]
 gi|167702746|gb|EDS17325.1| hypothetical protein CLORAM_02108 [Clostridium ramosum DSM 1402]
 gi|229382943|gb|EEO33034.1| ribonucleotide-diphosphate reductase subunit beta [Coprobacillus
           sp. D7]
          Length = 346

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ E P L+T E  +  R ML      EIA+    +     GL 
Sbjct: 218 RDENTHLWLFRNMIIELQKEEPTLFTPEKIEVYRNMLKRGVEEEIAWGQYVLGNRIEGLT 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y+ ++ N R   +  EPL++  E       W+S   +    + +FFE + T Y 
Sbjct: 278 MDMVSDYIHYLGNLRAFSLNFEPLYEGFETEPEAMKWVSIYSNANNIKTDFFEAKSTAYA 337

Query: 118 QGAELKWD 125
           + + ++ D
Sbjct: 338 KSSAIEDD 345


>gi|167627842|ref|YP_001678342.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597843|gb|ABZ87841.1| Ribonucleoside-diphosphate reductase [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
          Length = 410

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDES+H+     +      ENP++   +F+++   M  +A  LE  +       G   G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNQFKKEIYLMASKAVELEDKFIDLAYEIGTIEG 338

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A   ++Y++ I +RR +Q+GL  ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 339 LKADEVKEYIRHITDRRLNQLGLNEIYNIDKNPLTWLEWILNGADHTNFFENRVTEYEVA 398

Query: 120 A-ELKWD 125
                WD
Sbjct: 399 GLTGNWD 405


>gi|155370749|ref|YP_001426283.1| hypothetical protein FR483_N651L [Paramecium bursaria Chlorella
           virus FR483]
 gi|155124069|gb|ABT15936.1| hypothetical protein FR483_N651L [Paramecium bursaria Chlorella
           virus FR483]
          Length = 348

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  FG  + ++++        K    + + ++ EA   E  +  E +P   +G+N
Sbjct: 224 RDEGLHQQFGELLYSKLE-------NKLSLAQVKAIVEEAVANEKEFICEAIPCRMIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G    +  T NPF +M E+I L+ + NFFE RV+EYQ+   
Sbjct: 277 SELMGQYLEFVADRIFVALGHPKQYNAT-NPFDFM-ELISLEGKSNFFERRVSEYQRPGV 334

Query: 122 LK 123
           + 
Sbjct: 335 MN 336


>gi|13242599|ref|NP_077613.1| EsV-1-128 [Ectocarpus siliculosus virus 1]
 gi|13177402|gb|AAK14546.1|AF204951_128 EsV-1-128 [Ectocarpus siliculosus virus 1]
          Length = 419

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH    + +   +K   P       +++   +   A  +E  +    +P   +G++
Sbjct: 294 RDEGLHATASVLIYKHLKNRLP-------RERVHEIFKHAVSVECEFISSALPVALIGIS 346

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y++F+A+   +Q+G + ++    NPF WM  +I L+ + NFFE RV EY +   
Sbjct: 347 EKSMTEYIKFVADYWLNQLGYDKVYNCA-NPFEWMD-MISLQGKTNFFENRVAEYSKPGV 404

Query: 122 L 122
           L
Sbjct: 405 L 405


>gi|85710107|ref|ZP_01041172.1| ribonucleotide reductase beta subunit [Erythrobacter sp. NAP1]
 gi|85688817|gb|EAQ28821.1| ribonucleotide reductase beta subunit [Erythrobacter sp. NAP1]
          Length = 346

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 2/122 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH    I + +    E   L TK  ++    +  +   LE A+       G   G
Sbjct: 189 VRDETLHCEGIIKMFHTFCEERDCL-TKAVKEDIIDICQKTVRLEDAFIDLAFEMGPVEG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           + A   ++Y+++IA+ R  Q+ L+P++   E+P PW+S +++  +  NFFE R TEY +G
Sbjct: 248 MTAKDIKKYIRYIADWRLGQLNLQPIYMIDEHPLPWLSPLLNGVEHANFFEARATEYSKG 307

Query: 120 AE 121
           A 
Sbjct: 308 AT 309


>gi|50843560|ref|YP_056787.1| ribonucleotide-diphosphate reductase subunit beta
           [Propionibacterium acnes KPA171202]
 gi|282854887|ref|ZP_06264221.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes J139]
 gi|289427904|ref|ZP_06429608.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes J165]
 gi|295131638|ref|YP_003582301.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes SK137]
 gi|50841162|gb|AAT83829.1| ribonucleoside-diphosphate reductase beta chain [Propionibacterium
           acnes KPA171202]
 gi|282582033|gb|EFB87416.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes J139]
 gi|289158787|gb|EFD06987.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes J165]
 gi|291376691|gb|ADE00546.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes SK137]
 gi|313771782|gb|EFS37748.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL074PA1]
 gi|313808408|gb|EFS46875.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL087PA2]
 gi|313810605|gb|EFS48319.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL083PA1]
 gi|313813765|gb|EFS51479.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL025PA1]
 gi|313818171|gb|EFS55885.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL046PA2]
 gi|313821029|gb|EFS58743.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL036PA1]
 gi|313823899|gb|EFS61613.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL036PA2]
 gi|313827161|gb|EFS64875.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL063PA1]
 gi|313831646|gb|EFS69360.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL007PA1]
 gi|313834800|gb|EFS72514.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL056PA1]
 gi|314924366|gb|EFS88197.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL001PA1]
 gi|314927054|gb|EFS90885.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL036PA3]
 gi|314961874|gb|EFT05975.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL002PA2]
 gi|314965892|gb|EFT09991.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL082PA2]
 gi|314974996|gb|EFT19091.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL053PA1]
 gi|314977908|gb|EFT22002.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL045PA1]
 gi|314979603|gb|EFT23697.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL072PA2]
 gi|314981613|gb|EFT25706.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL110PA3]
 gi|314984684|gb|EFT28776.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL005PA1]
 gi|314988338|gb|EFT32429.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL005PA2]
 gi|314990428|gb|EFT34519.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL005PA3]
 gi|315082361|gb|EFT54337.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL078PA1]
 gi|315083809|gb|EFT55785.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL027PA2]
 gi|315087306|gb|EFT59282.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL002PA3]
 gi|315089724|gb|EFT61700.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL072PA1]
 gi|315092253|gb|EFT64229.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL110PA4]
 gi|315094826|gb|EFT66802.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL060PA1]
 gi|315095599|gb|EFT67575.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL038PA1]
 gi|315104692|gb|EFT76668.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL050PA2]
 gi|315107754|gb|EFT79730.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL030PA1]
 gi|327326613|gb|EGE68401.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL096PA3]
 gi|327332877|gb|EGE74609.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL096PA2]
 gi|327335278|gb|EGE76988.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL097PA1]
 gi|327447704|gb|EGE94358.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL043PA2]
 gi|327448579|gb|EGE95233.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL043PA1]
 gi|327449568|gb|EGE96222.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL013PA2]
 gi|328757395|gb|EGF71011.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL020PA1]
 gi|328762002|gb|EGF75508.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL099PA1]
 gi|332676502|gb|AEE73318.1| ribonucleoside-diphosphate reductase subunit beta
           [Propionibacterium acnes 266]
          Length = 328

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 1/120 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +P+G +G+
Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGILGM 263

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA     Y++++A+RR  ++G EP ++   NP  WM+   D  +  NFFE   T Y+  A
Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEYRVV-NPAKWMATANDTLQVVNFFEATNTSYEVNA 322


>gi|241668401|ref|ZP_04755979.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876934|ref|ZP_05249644.1| glutaredoxin 3/ribonucleotide reductase beta subunit [Francisella
           philomiragia subsp. philomiragia ATCC 25015]
 gi|254842955|gb|EET21369.1| glutaredoxin 3/ribonucleotide reductase beta subunit [Francisella
           philomiragia subsp. philomiragia ATCC 25015]
          Length = 410

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDES+H+     +      ENP++   +F+++   M  +A  LE  +       G   G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNQFKKEIYLMASKAVELEDKFIDLAYEIGTIEG 338

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A   ++Y++ I +RR +Q+GL  ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 339 LKADEVKEYIRHITDRRLNQLGLNEIYNIDKNPLTWLEWILNGADHTNFFENRVTEYEVA 398

Query: 120 A-ELKWD 125
                WD
Sbjct: 399 GLTGNWD 405


>gi|118443949|ref|YP_878438.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           novyi NT]
 gi|118134405|gb|ABK61449.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           novyi NT]
          Length = 342

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K ENP ++T+   ++ R M+      EI +         +G+N
Sbjct: 214 RDEITHLILFQNIIKELKNENPDIFTESIMEEFRMMMKMGVEHEIKWGQYVTNNEILGIN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
               E+Y+++++N R + IGLE L+ + TE+P  W+     L   + +FFE +VT Y + 
Sbjct: 274 DNLIEKYIKYLSNLRLNAIGLEVLYPEITEHPMEWIENFSKLNNTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|327328671|gb|EGE70431.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL103PA1]
          Length = 328

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 1/120 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +P+G +G+
Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGILGM 263

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA     Y++++A+RR  ++G EP ++   NP  WM+   D  +  NFFE   T Y+  A
Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEYRIV-NPAKWMATANDTLQVVNFFEATNTSYEVNA 322


>gi|313768143|ref|YP_004061574.1| hypothetical protein BpV1_144c [Bathycoccus sp. RCC1105 virus BpV1]
 gi|312599750|gb|ADQ91771.1| hypothetical protein BpV1_144c [Bathycoccus sp. RCC1105 virus BpV1]
          Length = 387

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 34/117 (29%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H  F +++ N +K        K  Q     ++ +A  +E  +  + +P   +G+N
Sbjct: 266 RDEGMHQEFAVELFNMLK-------NKPSQNTIEEIIRDAVSIEKEFITDALPCSLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           +    +Y++++A+R   Q+G   ++  T+NPF +M E I L  + NFFE RV +Y +
Sbjct: 319 SGKMSEYIEYVADRLSKQVGHNKIWN-TKNPFDFM-ENISLDGKTNFFEKRVGDYGK 373


>gi|256825983|ref|YP_003149943.1| ribonucleotide reductase subunit beta [Kytococcus sedentarius DSM
           20547]
 gi|256689376|gb|ACV07178.1| ribonucleotide reductase, beta subunit [Kytococcus sedentarius DSM
           20547]
          Length = 365

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 43/126 (34%), Positives = 72/126 (57%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F  +V+  ++ E P L+  E   + R ML EA   E  +A + +  G  GL+
Sbjct: 239 RDESMHMAFAFEVVETVRSEEPDLFDAEMAGQVRQMLMEAVDAEAQFAEDLLGMGVAGLS 298

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
                 Y++ +A+RR  Q+G+  ++  T+NP  +M E+ D+++  NFFE RV+ YQ G  
Sbjct: 299 VADMRAYLENVADRRAVQLGMPEIY-GTKNPLAFM-ELQDVQELSNFFERRVSAYQVGVE 356

Query: 120 AELKWD 125
             + +D
Sbjct: 357 GSVSFD 362


>gi|302381236|ref|YP_003817059.1| ribonucleoside-diphosphate reductase [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302191864|gb|ADK99435.1| Ribonucleoside-diphosphate reductase [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 348

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 2/122 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH +  I + +    E   + TK               LE  +       G + G
Sbjct: 200 VRDESLHCDGIIKLYHAFNKETG-VVTKAVADDIVQCCETVVGLEDKFIDLAFEAGEING 258

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     +QY++FIA+ R  Q+ L  L+   ENP PW+  ++   +  NFFE R TEY + 
Sbjct: 259 MTPEDIKQYIRFIADWRLRQLKLPELYGVKENPLPWLQSLLSGVEHANFFEARATEYSKA 318

Query: 120 AE 121
           A 
Sbjct: 319 AT 320


>gi|254293199|ref|YP_003059222.1| ribonucleotide-diphosphate reductase subunit beta [Hirschia baltica
           ATCC 49814]
 gi|254041730|gb|ACT58525.1| Ribonucleoside-diphosphate reductase [Hirschia baltica ATCC 49814]
          Length = 345

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 3/126 (2%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDESLH    + + +    E   L TK  +            LE  +       G   G
Sbjct: 198 VRDESLHCEGMMKMFHTYAEETGAL-TKTVKDDITDCCQTVVKLEDKFIDLAFEAGEVEG 256

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     + Y+++IA+ R  Q+ L+P++   E+P PW++E+++  +  NFFE R TEY +G
Sbjct: 257 MTPEDIKNYIRYIADWRLKQLKLDPVYGVDEHPIPWLTEILNGVEHANFFEARATEYSKG 316

Query: 120 A-ELKW 124
           A    W
Sbjct: 317 ATAGDW 322


>gi|50955339|ref|YP_062627.1| ribonucleotide-diphosphate reductase subunit beta [Leifsonia xyli
           subsp. xyli str. CTCB07]
 gi|50951821|gb|AAT89522.1| ribonucleoside-diphosphate reductase, beta chain [Leifsonia xyli
           subsp. xyli str. CTCB07]
          Length = 329

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 47/124 (37%), Positives = 73/124 (58%), Gaps = 4/124 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FGI++I  +  ENP L T EF  + + M+ +A  +E  Y  + +P G +GL
Sbjct: 205 VRDESLHLKFGINLILTVLEENPDLQTPEFAAEIKQMILDAVEMEEQYNRDLLPGGILGL 264

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY---Q 117
           NA    QY++++A+RR  ++G E  +K + NP  WM+   D  +  NFFE+  T Y    
Sbjct: 265 NANYINQYVKYLADRRLEELGFEAEYKVS-NPAKWMATANDTLELVNFFESTNTSYESNA 323

Query: 118 QGAE 121
           + + 
Sbjct: 324 KASS 327


>gi|327312835|ref|YP_004328272.1| ribonucleoside-diphosphate reductase subunit beta [Prevotella
           denticola F0289]
 gi|326946303|gb|AEA22188.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           denticola F0289]
          Length = 348

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I ++K E P ++T +  +    M+ E    EIA+    +     GLN
Sbjct: 220 RDENTHLWLFRSIILELKKEEPDMFTSDKIKVYEDMMREGVRQEIAWGQYVIGNDVQGLN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y++++ N R   +G   L+    + P    W+ +  +    + +FFE + T Y 
Sbjct: 280 EQMVSDYIRYLGNLRWSGLGFGFLYDDNRKEPENMKWVGQYSNANMVKTDFFEAKSTAYA 339

Query: 118 QGAELKWD 125
           +   L  D
Sbjct: 340 KSTALVDD 347


>gi|269864962|ref|XP_002651756.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|269866721|ref|XP_002652369.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220062645|gb|EED41686.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063933|gb|EED42300.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 135

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   I  +               ++ EA  +E  +  E++P   +G+N
Sbjct: 13  RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 63

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A+R    +G + ++  + NPF +M E I L+ + NFFE R   YQ+G
Sbjct: 64  CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 119


>gi|15613065|ref|NP_241368.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus
           halodurans C-125]
 gi|14195134|sp|Q9KFH7|RIR2_BACHD RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|10173115|dbj|BAB04221.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus
           halodurans C-125]
          Length = 345

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 2/122 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH+    ++  ++ +E P L T+E +   +T L +A  LE  +    +     G+N
Sbjct: 217 RDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLMKAADLEKDWFRYIIGDKIPGIN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
               E Y+ FIAN+R  Q+G+E  +   + NP  W+    D+   + +FFE +  +Y + 
Sbjct: 277 PEDMETYISFIANKRAVQLGMEKPYPEIKHNPMKWIRAYEDVNSGKSDFFEQKSRQYAKV 336

Query: 120 AE 121
           + 
Sbjct: 337 SA 338


>gi|85375147|ref|YP_459209.1| ribonucleotide-diphosphate reductase subunit beta [Erythrobacter
           litoralis HTCC2594]
 gi|84788230|gb|ABC64412.1| ribonucleotide reductase beta subunit [Erythrobacter litoralis
           HTCC2594]
          Length = 356

 Score =  137 bits (347), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDESLH    + + ++   E    +TK  ++    +  ++  LE  +       G   G
Sbjct: 189 VRDESLHCEGIVRLFHEFVRER-DCYTKAVKEDIIDICQKSVRLEDNFIDLAFEMGPVSG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     ++Y+++IA+ R  Q+GL+P++   ++P PW++ +++  +  NFFE R TEY +G
Sbjct: 248 MTPKEIKKYIRYIADWRLGQLGLQPIYMVDDHPLPWLAPLLNGVEHANFFEQRATEYSKG 307

Query: 120 AE 121
           A 
Sbjct: 308 AT 309


>gi|254418345|ref|ZP_05032069.1| ribonucleoside-diphosphate reductase, beta subunit [Brevundimonas
           sp. BAL3]
 gi|196184522|gb|EDX79498.1| ribonucleoside-diphosphate reductase, beta subunit [Brevundimonas
           sp. BAL3]
          Length = 349

 Score =  137 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 2/122 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDESLH    I + +    E     TK               +E  +       G   G
Sbjct: 201 VRDESLHCEGIIKLYHAFNKETG-AVTKAVADDIVDCCKTVVNMEDRFIDLAFEMGSVQG 259

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     +QY++FIA+ R  Q+ L  ++   ENP PW+  ++   +  NFFE R TEY + 
Sbjct: 260 MTPEDIKQYIRFIADWRLRQLKLPEVYGVKENPLPWLQSLLSGVEHANFFEARATEYSKA 319

Query: 120 AE 121
           A 
Sbjct: 320 AT 321


>gi|255658865|ref|ZP_05404274.1| ribonucleoside-diphosphate reductase, beta subunit [Mitsuokella
           multacida DSM 20544]
 gi|260849270|gb|EEX69277.1| ribonucleoside-diphosphate reductase, beta subunit [Mitsuokella
           multacida DSM 20544]
          Length = 347

 Score =  137 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++  ++ E P L+T E ++  R M+ E    EIA+    +     GLN
Sbjct: 219 RDENTHLWLFRNILRDLRAEEPDLFTPEREEMMREMIREGVRQEIAWGKYAIGNEVEGLN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKY-TENP--FPWMSEVIDLK-KEKNFFETRVTEYQ 117
               E Y+ ++ N R   IGL  L++   E P    W+S+  +    + +F E R T Y 
Sbjct: 279 EKMIEDYVHYLGNARAESIGLGTLYEGFEEEPSSMRWVSQYANPNFIKTDFIEGRSTAYA 338

Query: 118 QGAELKWD 125
           +   L  D
Sbjct: 339 KSTALVDD 346


>gi|155122339|gb|ABT14207.1| hypothetical protein MT325_M653L [Paramecium bursaria chlorella
           virus MT325]
          Length = 326

 Score =  137 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  FG  + ++++        K    + + ++ EA   E  +  E +P   +G+N
Sbjct: 202 RDEGLHQQFGELLYSKLE-------NKLSLAQVKAIVEEAVANEKEFICEAIPCRMIGMN 254

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G    +  T NPF +M E+I L+ + NFFE RV+EYQ+   
Sbjct: 255 SELMGQYLEFVADRIFVALGHPKQYNAT-NPFDFM-ELISLEGKSNFFERRVSEYQRPGV 312

Query: 122 LK 123
           + 
Sbjct: 313 MN 314


>gi|298207002|ref|YP_003715181.1| probable ribonucleoside-diphosphate reductase small chain
           [Croceibacter atlanticus HTCC2559]
 gi|83849636|gb|EAP87504.1| probable ribonucleoside-diphosphate reductase small chain
           [Croceibacter atlanticus HTCC2559]
          Length = 325

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 37/124 (29%), Positives = 68/124 (54%), Gaps = 8/124 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F + +       N HL  K  +++ R ++ +A  +E  +  E++P   +G+N
Sbjct: 198 RDEGMHCDFAVHL------HNKHLVNKVSKERIREIIVDALNIEREFITESLPASLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+ +R   ++  E  +  T NPF +M  +I L+ + NFFE RV +YQ+   
Sbjct: 252 SNLMTQYLEFVTDRLLLELECEKEYN-TANPFDFMD-MISLQGKTNFFEKRVGDYQKAGV 309

Query: 122 LKWD 125
           +  D
Sbjct: 310 MDQD 313


>gi|148273612|ref|YP_001223173.1| ribonucleotide-diphosphate reductase subunit beta [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
 gi|170782700|ref|YP_001711034.1| ribonucleotide-diphosphate reductase subunit beta [Clavibacter
           michiganensis subsp. sepedonicus]
 gi|147831542|emb|CAN02508.1| putative ribonucleoside-diphosphate reductase beta subunit
           [Clavibacter michiganensis subsp. michiganensis NCPPB
           382]
 gi|169157270|emb|CAQ02455.1| ribonucleoside-diphosphate reductase beta subunit [Clavibacter
           michiganensis subsp. sepedonicus]
          Length = 331

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 48/121 (39%), Positives = 74/121 (61%), Gaps = 1/121 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FGI++I  +  ENP L T+EF  + + M+ +A  +E  Y  + +P G +GL
Sbjct: 206 VRDESLHLKFGINLILTVLEENPDLQTEEFAAEIKQMILDAVEMEEQYNRDLLPNGILGL 265

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    QY++++A+RR  ++G E  +K + NP  WM+   D  +  NFFE+  T Y+  A
Sbjct: 266 NANYINQYVKYLADRRLEELGFEAEYKVS-NPAKWMATANDTLQLVNFFESTNTSYESNA 324

Query: 121 E 121
            
Sbjct: 325 S 325


>gi|333030473|ref|ZP_08458534.1| ribonucleotide reductase [Bacteroides coprosuis DSM 18011]
 gi|332741070|gb|EGJ71552.1| ribonucleotide reductase [Bacteroides coprosuis DSM 18011]
          Length = 347

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L+T E   + R M+ E    E+A+    + +   GL 
Sbjct: 219 RDENTHLWLFQSIILELRKEEPQLFTVEAIAEFRAMIKEGAEQEMAWGEYVIEEEIEGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-EKNFFETRVTEYQ 117
                 Y++++AN RC  +G E L+   E+      W+++  +    + +FFE + + Y 
Sbjct: 279 QEMVSDYIKYLANLRCENLGFEILYPGYEDEPASMSWVAQYSNANMIKTDFFEAKPSAYA 338

Query: 118 QGAELKWD 125
           +   +  D
Sbjct: 339 KSTSIIDD 346


>gi|299144102|ref|ZP_07037182.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
           sp. oral taxon 386 str. F0131]
 gi|298518587|gb|EFI42326.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
           sp. oral taxon 386 str. F0131]
          Length = 346

 Score =  137 bits (346), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E   L+T+E   + + ML E    EI +    +     G+ 
Sbjct: 218 RDENTHLWLFRNIIQELKKEEVELFTEERINEYKCMLMEGVRQEIEWGQYVIGDNIQGIT 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
           A   + Y++++ N R   IG   LF       N   W+SE  +  + + +FFE +V+ Y 
Sbjct: 278 AQMVKDYIEYLGNLRSRSIGFGNLFDRNIEEPNSMKWVSEYSNPNEIKTDFFEGKVSAYS 337

Query: 118 QGAELKWD 125
           + +  + D
Sbjct: 338 KSSVFEDD 345


>gi|160947324|ref|ZP_02094491.1| hypothetical protein PEPMIC_01258 [Parvimonas micra ATCC 33270]
 gi|158446458|gb|EDP23453.1| hypothetical protein PEPMIC_01258 [Parvimonas micra ATCC 33270]
          Length = 349

 Score =  137 bits (345), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     ++ +++ E P L+T+E     + M+      EIA+    + +   GL 
Sbjct: 218 RDENTHLWLFKKMLLELQNEEPELFTEEKVAVYKDMIKTGVEQEIAWGKYVLGENIPGLT 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
               E Y++++ N R   +    L+  Y E P    W+SE  D    + +FFE + + Y 
Sbjct: 278 IQMVEDYIKYLGNLRSTALNFGKLYDGYDEEPESMKWVSEYSDPNAIKTDFFEAKPSAYS 337

Query: 118 QGAELKWD 125
           + + +  D
Sbjct: 338 KSSVIDDD 345


>gi|306819883|ref|ZP_07453537.1| ribonucleotide-diphosphate reductase beta subunit [Eubacterium
           yurii subsp. margaretiae ATCC 43715]
 gi|304552130|gb|EFM40067.1| ribonucleotide-diphosphate reductase beta subunit [Eubacterium
           yurii subsp. margaretiae ATCC 43715]
          Length = 347

 Score =  137 bits (345), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 66/128 (51%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     ++ ++K E  H++T+E     R M+ +    EI +A   +     GL+
Sbjct: 219 RDENTHLWLFRSILLELKKEEAHIFTQENINLFRNMIKQGVEEEIRWAKYAIGDNIQGLS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
               E Y++++ N RC  +G + +++ Y + P    W+SE  D    + +FFE +V+ Y 
Sbjct: 279 MSMIEDYLKYLGNLRCKGLGFDNIYEGYEKEPESMSWVSEYSDPNAIKTDFFEAKVSAYA 338

Query: 118 QGAELKWD 125
           +   ++ D
Sbjct: 339 KSTVIEDD 346


>gi|187778605|ref|ZP_02995078.1| hypothetical protein CLOSPO_02200 [Clostridium sporogenes ATCC
           15579]
 gi|187772230|gb|EDU36032.1| hypothetical protein CLOSPO_02200 [Clostridium sporogenes ATCC
           15579]
          Length = 342

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 38/126 (30%), Positives = 70/126 (55%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K ENP+++T+E +++ R M+      EI +         +GLN
Sbjct: 214 RDEVTHLVLFQNIIKELKSENPNIFTEELEEEFREMMRMGVEHEIKWGQYVTNNEILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
               ++Y+++++N R   IGL+PL+ +  ++P  W+     L   + +FFE +VT Y + 
Sbjct: 274 DELIDKYIKYLSNLRLTAIGLKPLYPEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AVFDFD 339


>gi|11544904|emb|CAC17630.1| class I ribonucleotide-diphosphate reductase small subunit chain
           [Streptomyces jumonjinensis]
          Length = 322

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 38/111 (34%), Positives = 67/111 (60%), Gaps = 2/111 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ +  +    G  G+N
Sbjct: 213 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLQEAVEAELQFGSDLCGDGLPGMN 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 112
             S  +Y+Q +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R
Sbjct: 273 TESMREYLQCVADQRLTRLGFAPVY-GSENPFSFM-ELQGVQELTNFFERR 321


>gi|317122809|ref|YP_004102812.1| ribonucleoside-diphosphate reductase [Thermaerobacter marianensis
           DSM 12885]
 gi|315592789|gb|ADU52085.1| Ribonucleoside-diphosphate reductase [Thermaerobacter marianensis
           DSM 12885]
          Length = 336

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 43/121 (35%), Positives = 72/121 (59%), Gaps = 1/121 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DESLHL+FGI +I  +  E+P L T EF ++ + ++  A  LE  Y    +P+  +G+
Sbjct: 214 LKDESLHLSFGIHLITTLLEEHPELMTPEFAREVKGLILRAVELERDYNRALLPRPILGV 273

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A     Y++++ +RR  ++GL P F  T NP  WM+  +D+ +  NFFE R   Y+  A
Sbjct: 274 SADYLNAYIEYVTDRRLDELGLGPHF-GTPNPAQWMATEVDVPEIVNFFEARNIHYEVAA 332

Query: 121 E 121
           +
Sbjct: 333 D 333


>gi|197103810|ref|YP_002129187.1| ribonucleoside-diphosphate reductase, beta subunit
           [Phenylobacterium zucineum HLK1]
 gi|196477230|gb|ACG76758.1| ribonucleoside-diphosphate reductase, beta subunit
           [Phenylobacterium zucineum HLK1]
          Length = 350

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 2/122 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDESLH    I + +    E     T+               LE  +       G   G
Sbjct: 201 VRDESLHCEGIIKLYHAFNKETG-AVTQAVADDIVDCCKTVVGLEDKFIDLAFEAGEVQG 259

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     +QY++FIA+ R  Q+ L  ++   ENP PW+  ++   +  NFFE R TEY + 
Sbjct: 260 MTPDDIKQYIRFIADWRLKQLHLPQVYGIKENPLPWLQSMLSGVEHANFFEARATEYSKA 319

Query: 120 AE 121
           A 
Sbjct: 320 AT 321


>gi|295691241|ref|YP_003594934.1| Ribonucleoside-diphosphate reductase [Caulobacter segnis ATCC
           21756]
 gi|295433144|gb|ADG12316.1| Ribonucleoside-diphosphate reductase [Caulobacter segnis ATCC
           21756]
          Length = 346

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 2/122 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDESLH +  I + +    E     TK               LE  +       G   G
Sbjct: 198 IRDESLHCDGIIKLYHAFNKETG-AVTKAVADDIVDCCKHVVGLEDKFIDLAFEAGEIQG 256

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     + Y++FIA+ R  Q+ L  ++   ENP PW+  ++   +  NFFE R TEY + 
Sbjct: 257 MTPDDIKSYIRFIADWRLRQLQLPEVYGVKENPLPWLQSLLSGVEHANFFEARATEYSKA 316

Query: 120 AE 121
           A 
Sbjct: 317 AT 318


>gi|38683666|gb|AAR26843.1| FirrV-1-A19 [Feldmannia irregularis virus a]
          Length = 342

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH    + + N +K   P             +  +A  LE  +  E++P   +G+N
Sbjct: 217 RDEGLHAEGSVMIYNHLKHRLP-------VAVVHDIFTDAVALEKEFIRESLPVSLIGIN 269

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A +   Y++++++    ++G   LF  T+NPF WM+ +I ++ + NFFE RV EY +   
Sbjct: 270 ADTMSSYIEYVSDFWIQRLGYPKLF-GTKNPFEWMT-MIGMEGKSNFFEGRVAEYAKAGS 327

Query: 122 LK 123
           + 
Sbjct: 328 MT 329


>gi|313793687|gb|EFS41718.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL110PA1]
 gi|327456018|gb|EGF02673.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL092PA1]
          Length = 328

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 43/120 (35%), Positives = 69/120 (57%), Gaps = 1/120 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +P+G  G+
Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGIRGM 263

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA     Y++++A+RR  ++G EP ++   NP  WM+   D  +  NFFE   T Y+  A
Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEYRVA-NPAKWMATANDTLQVVNFFEATNTSYEVNA 322


>gi|148554425|ref|YP_001262007.1| ribonucleotide-diphosphate reductase subunit beta [Sphingomonas
           wittichii RW1]
 gi|148499615|gb|ABQ67869.1| Ribonucleoside-diphosphate reductase [Sphingomonas wittichii RW1]
          Length = 350

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 2/122 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDE+LH    + + +    E   L T   +     M  +   +E A+       G V G
Sbjct: 189 IRDETLHCEGIVRLFHAFVKERDCL-TASVKDDILDMCQKTVRIEDAFIDLVFEMGPVNG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     ++Y+++IA+ R  Q+GL+P++   ++P PW++ +++  +  NFFETR TEY + 
Sbjct: 248 MTPKDIKKYVRYIADWRLGQLGLKPIYMIEDHPLPWLAPLLNGVEHANFFETRATEYSKA 307

Query: 120 AE 121
           A 
Sbjct: 308 AT 309


>gi|296082342|emb|CBI21347.3| unnamed protein product [Vitis vinifera]
          Length = 227

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 36/111 (32%), Positives = 64/111 (57%), Gaps = 6/111 (5%)

Query: 17  QIKIENPH----LWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFI 72
           QI IEN H    L  K  +++ + ++ ++  +E  +  + +P   VG+N+    QY++F+
Sbjct: 102 QIAIENIHSEILLRNKLSEERVKAIVADSVDIEREFVCDALPCALVGMNSALMSQYIEFV 161

Query: 73  ANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAELK 123
           A+R    +G   ++  + NPF WM E+I L+ + NFFE RV EYQ+ + + 
Sbjct: 162 ADRLLGALGYGKMYNVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKASVMS 210


>gi|229495919|ref|ZP_04389645.1| ribonucleoside-diphosphate reductase, beta subunit [Porphyromonas
           endodontalis ATCC 35406]
 gi|229317232|gb|EEN83139.1| ribonucleoside-diphosphate reductase, beta subunit [Porphyromonas
           endodontalis ATCC 35406]
          Length = 346

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L+T E + +   M+ E  L EIA+    +     GL 
Sbjct: 218 RDENTHLWLFRSMILELRREQPELFTPEREAEFLEMIREGALQEIAWGKYVIGDEIEGLT 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-EKNFFETRVTEYQ 117
           +     Y+ ++AN R   +GL  +F   E       W+S+  +    + +FFE + + Y 
Sbjct: 278 SQMVSDYIMYLANLRSANLGLGVIFPGHEEEPASMSWVSQYSNSNLIKTDFFEAKPSAYA 337

Query: 118 QGAELKWD 125
           + A ++ D
Sbjct: 338 KSASIEDD 345


>gi|255323570|ref|ZP_05364700.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           showae RM3277]
 gi|255299284|gb|EET78571.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           showae RM3277]
          Length = 340

 Score =  136 bits (344), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+T E + K   M   A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRTERPDLFTPETEAKIYDMFERAGELEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               EQY++++ ++R   IGL+  +    +P  W+ +      +K NFFE +VT Y +G+
Sbjct: 276 DDIIEQYIRYLIDQRLVAIGLKRRYN-VPHPIKWVDDFAKFNDQKSNFFEAKVTNYSKGS 334

Query: 121 ELKWD 125
            + +D
Sbjct: 335 -ISFD 338


>gi|22788780|ref|NP_690492.1| Rr2 [Heliothis zea virus 1]
 gi|22671540|gb|AAN04367.1|AF451898_72 Rr2 [Heliothis zea virus 1]
          Length = 333

 Score =  136 bits (344), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 32/120 (26%), Positives = 65/120 (54%), Gaps = 6/120 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F I +        P   + +  +K   ++ +A  +E  +  E++P   +G+N
Sbjct: 205 RDEGLHCDFAILLFRNYL--RPECRSSD--EKVINIVTDAVRIEQEFLTESLPVSMIGMN 260

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                +Y++F+A+R  +++    ++   +NPF +M+  I L+ + NFFE +V+EY++   
Sbjct: 261 CKLMCEYIEFVADRLLYELIGRKIYN-AKNPFDFMTS-ISLEGKTNFFEKKVSEYKRYGV 318


>gi|149185037|ref|ZP_01863354.1| ribonucleotide reductase beta subunit [Erythrobacter sp. SD-21]
 gi|148831148|gb|EDL49582.1| ribonucleotide reductase beta subunit [Erythrobacter sp. SD-21]
          Length = 352

 Score =  136 bits (344), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 2/122 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDESLH    I + ++   E   L TK  ++    +  +   LE  +       G   G
Sbjct: 189 IRDESLHCEGIIRMFHEFVRERDCL-TKAVKEDIIDICQKTVRLEDNFIDLAFEMGPVSG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     ++Y+++IA+ R  Q+ L+P++   ++P PW++ +I+  +  NFFE R TEY +G
Sbjct: 248 MTPKDIKKYIRYIADWRLGQLNLDPIYMVDDHPLPWLAPLINGVEHANFFEQRATEYSKG 307

Query: 120 AE 121
           A 
Sbjct: 308 AT 309


>gi|162452149|ref|YP_001614516.1| ribonucleotide-diphosphate reductase [Sorangium cellulosum 'So ce
           56']
 gi|161162731|emb|CAN94036.1| Ribonucleotide-diphosphate reductase [Sorangium cellulosum 'So ce
           56']
          Length = 339

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 2/122 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H+ F  +V++  + E P L+     +    M+ EA   E  +A + +  G  G++
Sbjct: 213 RDESAHMRFAFEVVSTARREEPELFDAGLARSILDMMDEAIACEARFAEDLLGAGVAGMS 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    +Y++F A++R   +G+   +   +NPF +M  + D+++  NFFE RV+ YQ G  
Sbjct: 273 ARDVRRYLEFCADQRLATLGMPKRY-GAKNPFSFMD-LQDVQEVTNFFERRVSAYQVGVS 330

Query: 122 LK 123
            +
Sbjct: 331 GE 332


>gi|118197598|ref|YP_874310.1| ribonucleotide reductase small subunit [Ecotropis obliqua NPV]
 gi|113472593|gb|ABI35800.1| ribonucleotide reductase small subunit [Ecotropis obliqua NPV]
          Length = 341

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 6/123 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F     N        +  K   Q+  +M  EA  +E  +    +P   +G+N
Sbjct: 217 RDEGLHTDFACMYYNNYIP----INEKLSPQQILSMFIEAVDIEKEFFTTALPCYLLGIN 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    +Y++F+A+R   ++     F  T NPF +M+  I L+ + NFFE RV EY++   
Sbjct: 273 ATEMCKYIEFVADRLLVELRQPKHFN-TPNPFNFMT-NISLEGKTNFFERRVGEYKRFGA 330

Query: 122 LKW 124
            + 
Sbjct: 331 GQD 333


>gi|157164305|ref|YP_001467763.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           concisus 13826]
 gi|112800348|gb|EAT97692.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           concisus 13826]
          Length = 340

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+T E + K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFTPETEAKIYDMFEKAGNLEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               EQY+ ++ ++R   IGL+  +    +P  W+ +      +K NFFE +VT Y +G+
Sbjct: 276 DDIIEQYIHYLIDQRLVAIGLKRKYNVA-HPIKWVDDFAKFNDQKSNFFEAKVTNYSKGS 334

Query: 121 ELKWD 125
            + +D
Sbjct: 335 -ISFD 338


>gi|168186576|ref|ZP_02621211.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum C str. Eklund]
 gi|169295422|gb|EDS77555.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum C str. Eklund]
          Length = 342

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K EN  ++T+   ++ R M+      EI +         +G+N
Sbjct: 214 RDEITHLILFQNIIKELKNENLDIFTESIIEEFRMMMKTGVEHEIKWGQYVTNNEILGIN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
               E+Y+++++N R + IGLE L+ + TE+P  W+     L   + +FFE +VT Y + 
Sbjct: 274 NNLIEKYIKYLSNLRLNAIGLEVLYPEITEHPMEWIENFSKLNNTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|329888543|ref|ZP_08267141.1| ribonucleotide reductase, small chain family protein [Brevundimonas
           diminuta ATCC 11568]
 gi|328847099|gb|EGF96661.1| ribonucleotide reductase, small chain family protein [Brevundimonas
           diminuta ATCC 11568]
          Length = 348

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 2/122 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    I + +    E     TK               +E  +       G V G
Sbjct: 201 VRDESLHCEGIIKLYHAFNKETG-AVTKAVADDIVDCCKTVIEMEDKFIDLAFEMGPVNG 259

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     + Y++FIA+ R  Q+ L  ++  TENP PW+  ++   +  NFFE R TEY + 
Sbjct: 260 MTPDDIKAYIRFIADWRLRQLHLPEVYGVTENPLPWLQALLSGVEHANFFEARATEYSKA 319

Query: 120 AE 121
           A 
Sbjct: 320 AT 321


>gi|163955147|ref|YP_001648251.1| hypothetical protein OsV5_174r [Ostreococcus virus OsV5]
 gi|163638596|gb|ABY27955.1| hypothetical protein OsV5_174r [Ostreococcus virus OsV5]
          Length = 322

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 33/124 (26%), Positives = 64/124 (51%), Gaps = 12/124 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F +++   ++        +        ++ EA  +E  +  + +P   +G+N
Sbjct: 201 RDEGLHQEFAVELFKTLR-------NRPGVDTIHAIVREAVEIEKGFILDALPCNLIGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    +Y++++++R   QIG+  ++  ++NPF +M E I L  + NFFE RV +Y    +
Sbjct: 254 SEKMSEYIEYVSDRLLKQIGVPTIWN-SKNPFDFM-ENISLDGKTNFFEKRVGDY---GK 308

Query: 122 LKWD 125
           L  D
Sbjct: 309 LDDD 312


>gi|268678691|ref|YP_003303122.1| ribonucleoside-diphosphate reductase [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268616722|gb|ACZ11087.1| Ribonucleoside-diphosphate reductase [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 340

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN  K E P L+T   + K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINTTKKERPDLFTDALKAKVYEMFQKAGDLEIEWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120
               E Y+ ++ + R   +G + L+    +P  W+ +       + NFFE  V+ Y +G+
Sbjct: 276 DDIIETYIHYLVDDRLTAVGFDKLYN-ASHPIKWVDDFSKFNDQKTNFFEGNVSNYSKGS 334

Query: 121 ELKWD 125
            L +D
Sbjct: 335 -LSFD 338


>gi|87198296|ref|YP_495553.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium
           aromaticivorans DSM 12444]
 gi|87133977|gb|ABD24719.1| Ribonucleoside-diphosphate reductase [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 351

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 2/122 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDESLH      + +    E   L TK  ++       +   LE A+      +G   G
Sbjct: 189 VRDESLHCEGITRLFHAFVKERGCL-TKAVKEDIIDCCQKTVRLEDAFIDLAFEQGPVPG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           ++A   ++Y+++IA+ R  Q+GL  ++   ++P PW++ +++  +  NFFETR TEY + 
Sbjct: 248 MSAKEIKRYIRYIADWRLSQLGLPAIYMIEDHPLPWLAPLLNGVEHANFFETRATEYSKA 307

Query: 120 AE 121
           A 
Sbjct: 308 AT 309


>gi|16124515|ref|NP_419079.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter
           crescentus CB15]
 gi|221233200|ref|YP_002515636.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter
           crescentus NA1000]
 gi|13421393|gb|AAK22247.1| ribonucleoside-diphosphate reductase, beta subunit [Caulobacter
           crescentus CB15]
 gi|220962372|gb|ACL93728.1| ribonucleoside-diphosphate reductase beta chain [Caulobacter
           crescentus NA1000]
          Length = 347

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 2/122 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDESLH +  I + +    E     TK               +E  +       G   G
Sbjct: 198 IRDESLHCDGIIKLYHAFNKETG-AVTKAVADDIVDCCKTVVGMEDNFIDLAFEAGDIQG 256

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     + Y++F+A+ R  Q+ L  ++   ENP PW+  ++   +  NFFE R TEY + 
Sbjct: 257 MTPDDIKAYIRFVADWRLRQLHLPEVYGVKENPLPWLQSLLSGVEHANFFEARATEYSKA 316

Query: 120 AE 121
           A 
Sbjct: 317 AT 318


>gi|290343623|ref|YP_003494990.1| hypothetical protein OTV1_151 [Ostreococcus tauri virus 1]
 gi|260161038|emb|CAY39739.1| hypothetical protein OTV1_151 [Ostreococcus tauri virus 1]
          Length = 389

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 33/124 (26%), Positives = 64/124 (51%), Gaps = 12/124 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F +++   ++        +        ++ EA  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHQEFAVELFKTLR-------NRPGVDTIHAIVREAVDIEKGFILDALPCNLIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    +Y++++++R   QIG+  ++  ++NPF +M E I L  + NFFE RV +Y    +
Sbjct: 321 SEKMSEYIEYVSDRLLKQIGVPTIWN-SKNPFDFM-ENISLDGKTNFFEKRVGDY---GK 375

Query: 122 LKWD 125
           L  D
Sbjct: 376 LDDD 379


>gi|289548460|ref|YP_003473448.1| ribonucleoside-diphosphate reductase [Thermocrinis albus DSM 14484]
 gi|289182077|gb|ADC89321.1| Ribonucleoside-diphosphate reductase [Thermocrinis albus DSM 14484]
          Length = 342

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H++   ++I  +K ENP L+T E ++  +     A   EI +         +G+N
Sbjct: 218 RDELTHVSLFRNIILTLKKENPELFTPEMEKWVKEFFRYAASEEIKWGQYVTRNQILGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
               ++Y++++AN R  QIG EP+F   TENP  W+     +   + +FF+ +   Y + 
Sbjct: 278 DQLIDRYIKYLANLRLTQIGYEPVFPDVTENPMKWIDTFRTINDTKTDFFQAKPQTYAKR 337

Query: 120 AELKW 124
           +ELKW
Sbjct: 338 SELKW 342


>gi|313887688|ref|ZP_07821370.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
           harei ACS-146-V-Sch2b]
 gi|312846297|gb|EFR33676.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
           harei ACS-146-V-Sch2b]
          Length = 346

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I ++K E P ++T E  +K + ML +    EIA+    +     GLN
Sbjct: 218 RDENTHLWLFRSIILEMKKEEPEIFTDENIEKYKEMLKKGVEEEIAWGKYVIGDEIKGLN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
               E Y+ ++ N R   +G   LF           W+SE  D  + + +FFE R + Y 
Sbjct: 278 EKMIEDYIMYLGNLRSRNLGFGNLFDENIDEPESMKWVSEYSDPNQIKTDFFEARPSAYS 337

Query: 118 QGAELKWD 125
           + + ++ D
Sbjct: 338 KSSVIEDD 345


>gi|254449372|ref|ZP_05062814.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium HTCC5015]
 gi|198261018|gb|EDY85321.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium HTCC5015]
          Length = 404

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 50/124 (40%), Positives = 65/124 (52%), Gaps = 3/124 (2%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDE +H +FG+ V  QI  E          +  R M  E    E  YA   +    +G 
Sbjct: 284 MRDEVMHASFGLRVARQIMREENIQPDP---KAMREMWDECEAAEEGYARYLLRDPILGY 340

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A       +FIANRR +++ LE  F   EN  PW+ E  +++KEKNFFETRVTEYQ G 
Sbjct: 341 SAEDHVNQFRFIANRRANKLSLEEPFPGAENALPWLDEQANMRKEKNFFETRVTEYQVGG 400

Query: 121 ELKW 124
            L W
Sbjct: 401 GLTW 404


>gi|332185556|ref|ZP_08387304.1| ribonucleotide reductase, small chain family protein [Sphingomonas
           sp. S17]
 gi|332014534|gb|EGI56591.1| ribonucleotide reductase, small chain family protein [Sphingomonas
           sp. S17]
          Length = 351

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 2/122 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    I + +    E   L TK  +            LE  +       G V G
Sbjct: 189 VRDESLHCEGIIQLFHAFTKERQCL-TKAVKDDIADQCQTTVRLEDNFIDLAFEMGPVNG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           + A   ++Y+++IA+ R  Q+GL+P++   E+P PW++ +++  +  NFFETR TEY + 
Sbjct: 248 MTAKDIKKYIRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANFFETRATEYSKA 307

Query: 120 AE 121
           A 
Sbjct: 308 AT 309


>gi|223039245|ref|ZP_03609535.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           rectus RM3267]
 gi|222879606|gb|EEF14697.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           rectus RM3267]
          Length = 340

 Score =  135 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+T E + K   M   A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRTERPDLFTSEMEAKIYDMFKRAGELEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               EQY++++ ++R   IGL+  +    +P  W+ +      +K NFFE +VT Y +G+
Sbjct: 276 DDIIEQYIRYLIDQRLVAIGLKRRYD-ARHPIKWVDDFAKFNDQKSNFFEAKVTNYSKGS 334

Query: 121 ELKWD 125
            + +D
Sbjct: 335 -ISFD 338


>gi|315497476|ref|YP_004086280.1| ribonucleoside-diphosphate reductase [Asticcacaulis excentricus CB
           48]
 gi|315415488|gb|ADU12129.1| Ribonucleoside-diphosphate reductase [Asticcacaulis excentricus CB
           48]
          Length = 350

 Score =  135 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 2/122 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDESLH    I + +    E     TK               LE  +   +   G   G
Sbjct: 200 VRDESLHCEGIIKLYHAFNKETG-AVTKAVADDIVDCCKTVVSLEDKFIDLSFEMGPVEG 258

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     +QY+++IA+ R  Q+ L  +F   ENP PW+  ++   +  NFFE R TEY + 
Sbjct: 259 MTPDDIKQYIRYIADWRLRQLELPEVFGVQENPLPWLQVLLSGVEHANFFEARATEYSKA 318

Query: 120 AE 121
           A 
Sbjct: 319 AT 320


>gi|329847182|ref|ZP_08262210.1| ribonucleotide reductase, small chain family protein [Asticcacaulis
           biprosthecum C19]
 gi|328842245|gb|EGF91814.1| ribonucleotide reductase, small chain family protein [Asticcacaulis
           biprosthecum C19]
          Length = 352

 Score =  135 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 3/123 (2%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDESLH    I + +    E   L TK  Q            +E  +       G   G
Sbjct: 200 VRDESLHCEGIIKLYHAFAKETKAL-TKSVQDDIIDCCKTVVTMEDKFIDLAFEMGPVQG 258

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           +     + Y+++IA+ R  Q+ L  ++    ENP PW+  ++   +  NFFE R TEY +
Sbjct: 259 MTPDDIKAYIRYIADWRLRQLNLPEVYGGVKENPLPWLQVLLSGVEHANFFEARATEYSK 318

Query: 119 GAE 121
            A 
Sbjct: 319 AAT 321


>gi|281204152|gb|EFA78348.1| ribonucleotide reductase-related protein [Polysphondylium pallidum
           PN500]
          Length = 323

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 9/120 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F   + ++       L  K   +   +++ +A   E  +  +++P   +G+N
Sbjct: 199 RDEGLHCQFACLLYSK-------LVNKLDAKTIESIIRDAVDCEKEFITQSLPVDLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                +Y++F+A+     +G + ++  T NPF WM E+I +    NFFE R T Y     
Sbjct: 252 NRLMSEYIEFVADHLIVALGYKKIYN-TANPFDWM-ELISIDTRTNFFEHRNTSYTIPGV 309


>gi|326386063|ref|ZP_08207687.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326209288|gb|EGD60081.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 351

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 2/122 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH      +      E     TK  ++       +   LE A+      +G   G
Sbjct: 189 VRDETLHCEGITRLFQAFVQER-DCMTKAVREDIIDCCQKTVRLEDAFIDLAFEQGPVPG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           ++A   ++Y+++IA+ R  Q+G +P++   E+P PW++ +++  +  NFFETR TEY + 
Sbjct: 248 MSAKEIKRYIRYIADWRLGQLGFQPIYMIEEHPLPWLTPLLNGVEHANFFETRATEYSKA 307

Query: 120 AE 121
           A 
Sbjct: 308 AT 309


>gi|188588149|ref|YP_001919720.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           botulinum E3 str. Alaska E43]
 gi|251778737|ref|ZP_04821657.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|188498430|gb|ACD51566.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum E3 str. Alaska E43]
 gi|243083052|gb|EES48942.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 344

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ ENP  +T + + + + M+      EI + H  +     G+N
Sbjct: 218 RDENTHLWLFRNIIKELQSENPESFTTDLKNELKEMMRIGVENEILWGHYVIGDKIQGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
               E Y++++ N+R  +IGL  LF+   ENP  W+  V +    + +FFE + T Y + 
Sbjct: 278 KKLIEDYIKYLGNKRLKEIGLGMLFEGFEENPATWVDVVANSNSVKTDFFEAKSTAYAKV 337

Query: 120 AELKWD 125
           + L  D
Sbjct: 338 STLIDD 343


>gi|149916691|ref|ZP_01905193.1| putative ribonucleoside-diphosphate reductase beta chain
           [Plesiocystis pacifica SIR-1]
 gi|149822408|gb|EDM81797.1| putative ribonucleoside-diphosphate reductase beta chain
           [Plesiocystis pacifica SIR-1]
          Length = 356

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H+ F   VI+ ++ + P L+  E +     M+ EA   E+A+A + +  G  GL 
Sbjct: 230 RDESAHMAFAFSVIDVVRDQEPELFDAELEAAVVEMIEEAVACEVAFAEDLLGLGVAGLT 289

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                 Y+++ A++R  ++G+   +  + NP  +M E+ D+ +  NFFE RV+ YQ G  
Sbjct: 290 VADLRAYLEYCADQRLQRLGMATRY-GSTNPLSFM-ELQDIPELANFFERRVSAYQHGVS 347

Query: 122 LKWD 125
              D
Sbjct: 348 GTID 351


>gi|11544907|emb|CAC17632.1| class I ribonucleotide-diphosphate reductase small chain
           [Streptomyces microflavus]
          Length = 321

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/111 (33%), Positives = 68/111 (61%), Gaps = 2/111 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+    Q++   ML EA   E+ +  +   +G  G+N
Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPELFDDALQEQVTAMLKEAVEAELQFGRDLCGEGLPGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 112
             S  +Y+Q +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R
Sbjct: 272 TESMREYLQCVADQRLTRLGFAPVY-GSENPFAFM-ELQGVQELTNFFERR 320


>gi|313903043|ref|ZP_07836438.1| Ribonucleoside-diphosphate reductase [Thermaerobacter subterraneus
           DSM 13965]
 gi|313466767|gb|EFR62286.1| Ribonucleoside-diphosphate reductase [Thermaerobacter subterraneus
           DSM 13965]
          Length = 336

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 42/121 (34%), Positives = 71/121 (58%), Gaps = 1/121 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DESLHL+FGI +I  +  E+P L T  F ++ + ++  A  LE  Y    +P+  +G+
Sbjct: 214 LKDESLHLSFGIHLITALLEEHPELMTPAFAREVKGLILRAVELERDYNRALLPRPILGV 273

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A     Y++++ +RR  ++GL P F  T NP  WM+  +D+ +  NFFE R   Y+  A
Sbjct: 274 SADYLNAYVEYVTDRRLDELGLGPHF-GTPNPAKWMATEVDVPEIVNFFEARNIHYEVAA 332

Query: 121 E 121
           +
Sbjct: 333 D 333


>gi|73974200|ref|XP_858061.1| PREDICTED: similar to ribonucleotide reductase M2 B (TP53
           inducible) isoform 3 [Canis familiaris]
          Length = 338

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 22/121 (18%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++  A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++F+                 ENPF +M E I L+ + NFFE RV EYQ+ A 
Sbjct: 279 CVLMKQYIEFVFQ--------------AENPFDFM-ENISLEGKTNFFEKRVAEYQRFAV 323

Query: 122 L 122
           +
Sbjct: 324 M 324


>gi|57505748|ref|ZP_00371674.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           upsaliensis RM3195]
 gi|57016021|gb|EAL52809.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           upsaliensis RM3195]
          Length = 340

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+ ++   K  +M   A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFNEQNIDKIYSMFKRAGELEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   I L+ ++   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLIAINLDKIYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334

Query: 121 ELKWD 125
            + +D
Sbjct: 335 -ISFD 338


>gi|197322443|ref|YP_002154716.1| putative ribonucleotide reductase small subunit [Feldmannia species
           virus]
 gi|197130510|gb|ACH46846.1| putative ribonucleotide reductase small subunit [Feldmannia species
           virus]
          Length = 342

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH    + + N +K   P             +  +AT +E  +  E +P   +G+N
Sbjct: 217 RDEGLHAEGSVMIYNHLKHRLP-------VAVVHDIFGQATTIEKEFIREALPVSLIGIN 269

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A +   Y+++I++    ++G   LF  ++NPF WM+ +I ++ + NFFE RV EY +   
Sbjct: 270 AGTMSTYIEYISDFWLEKLGYPKLFN-SKNPFEWMT-MIGMEGKSNFFEGRVAEYSKAGS 327

Query: 122 LK 123
           + 
Sbjct: 328 MT 329


>gi|119360103|gb|ABL66780.1| At5g40942 [Arabidopsis thaliana]
          Length = 231

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 6/111 (5%)

Query: 17  QIKIENPH----LWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFI 72
           QI IEN H    L TK  + + + ++ +A  +E  +  + +    VG+N     QY++F+
Sbjct: 103 QIAIENIHSEILLRTKFDEDRLKAIVCDAVEIEREFVCDALSCALVGMNRELMSQYIEFV 162

Query: 73  ANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAELK 123
           A+R    +G   ++  T NPF WM E+I L+ + NFFE RV EYQ+ + + 
Sbjct: 163 ADRLLAALGCGKVYGVT-NPFDWM-ELISLQGKTNFFEKRVGEYQKASVMS 211


>gi|169824933|ref|YP_001692544.1| ribonucleotide-diphosphate reductase subunit beta [Finegoldia magna
           ATCC 29328]
 gi|167831738|dbj|BAG08654.1| ribonucleoside-diphosphate reductase beta subunit [Finegoldia magna
           ATCC 29328]
          Length = 354

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I  +K E P L+T+E   + + M+ +    EI +A   + +   GL+
Sbjct: 226 RDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGAEAEIEWAKYVIGEKIQGLS 285

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKY--TENP-FPWMSEVIDLKK-EKNFFETRVTEYQ 117
               E Y++++ N R   +G   ++     E P   W+SE  D  K + +FFE + + Y 
Sbjct: 286 IKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIKTDFFEAKPSAYS 345

Query: 118 QGAELKWD 125
           + A ++ D
Sbjct: 346 KSAIIEDD 353


>gi|283955349|ref|ZP_06372848.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 414]
 gi|283793109|gb|EFC31879.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 414]
          Length = 340

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+  E   K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   I L+ L+   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334

Query: 121 ELKWD 125
            + +D
Sbjct: 335 -ISFD 338


>gi|86149605|ref|ZP_01067835.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|86151167|ref|ZP_01069382.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|86153704|ref|ZP_01071907.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|88597173|ref|ZP_01100408.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|121613260|ref|YP_999944.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|157414529|ref|YP_001481785.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni 81116]
 gi|167004901|ref|ZP_02270659.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|218561895|ref|YP_002343674.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|283955655|ref|ZP_06373148.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 1336]
 gi|315123818|ref|YP_004065822.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           jejuni subsp. jejuni ICDCCJ07001]
 gi|85839873|gb|EAQ57132.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|85841514|gb|EAQ58761.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|85842665|gb|EAQ59877.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|87250215|gb|EAQ73173.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|88190234|gb|EAQ94208.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|112359601|emb|CAL34386.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|157385493|gb|ABV51808.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni 81116]
 gi|283792880|gb|EFC31656.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 1336]
 gi|284925507|gb|ADC27859.1| ribonucleoside-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni IA3902]
 gi|307747171|gb|ADN90441.1| Ribonucleoside-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni M1]
 gi|315017540|gb|ADT65633.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           jejuni subsp. jejuni ICDCCJ07001]
 gi|315928159|gb|EFV07477.1| ribonucleotide reductase, small chain family protein [Campylobacter
           jejuni subsp. jejuni DFVF1099]
 gi|315932030|gb|EFV10983.1| ribonucleotide reductase, small chain family protein [Campylobacter
           jejuni subsp. jejuni 327]
          Length = 340

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+  E   K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   I L+ L+   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334

Query: 121 ELKWD 125
            + +D
Sbjct: 335 -ISFD 338


>gi|205356539|ref|ZP_03223302.1| ribonucleoside diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|205345544|gb|EDZ32184.1| ribonucleoside diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni CG8421]
          Length = 340

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+  E   K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   I L+ L+   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334

Query: 121 ELKWD 125
            + +D
Sbjct: 335 -ISFD 338


>gi|154174558|ref|YP_001409201.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           curvus 525.92]
 gi|112803525|gb|EAU00869.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           curvus 525.92]
          Length = 340

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T E ++K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRAERSDLFTPEMEEKIYDMFEKAGNLEIKWGRYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   IGL+  +   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLVAIGLKRKYN-AKHPIKWVDDFAKFNDQKSNFFESKVTNYSKGS 334

Query: 121 ELKWD 125
            L +D
Sbjct: 335 -LSFD 338


>gi|310831442|ref|YP_003970085.1| putative ribonucleoside-diphosphate reductase small subunit
           [Cafeteria roenbergensis virus BV-PW1]
 gi|309386626|gb|ADO67486.1| putative ribonucleoside-diphosphate reductase small subunit
           [Cafeteria roenbergensis virus BV-PW1]
          Length = 326

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 9/118 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H ++ I + + ++        K  Q+K + M  +A   E  +  E++P   +G+N
Sbjct: 201 RDEGMHCDYSIMLYHMLQ-------NKLSQEKIQQMFKDAVETERIFICESLPCSLLGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           A   EQY++F+A++   ++G   +FK  +NPF WM E I ++ + NFFE R T+YQ+ 
Sbjct: 254 ADLMEQYIKFVADQLIIKLGYNKIFK-VDNPFTWM-EAISIEGKTNFFEHRPTQYQRA 309


>gi|19074323|ref|NP_585829.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon
           cuniculi GB-M1]
 gi|51701822|sp|Q8SRR2|RIR2_ENCCU RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|19068965|emb|CAD25433.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon
           cuniculi GB-M1]
          Length = 325

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F   +   +K +           + + ++ +A  +E  +  E++P   +G+N
Sbjct: 202 RDEGLHCEFACLLHYHLKKK---------CNRIKEVVMDAVEIEKKFLSESLPVNLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                +Y++F+A+R    +G E ++  T NPF +M E I L  + NFF+ R ++YQ+ 
Sbjct: 253 CNLMCRYIEFVADRLLENLGEERVYNAT-NPFDFM-ENISLVGKTNFFDKRESQYQKA 308


>gi|57237291|ref|YP_178304.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni RM1221]
 gi|148926379|ref|ZP_01810063.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|57166095|gb|AAW34874.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni RM1221]
 gi|145844771|gb|EDK21876.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|315057661|gb|ADT71990.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Campylobacter jejuni subsp. jejuni S3]
          Length = 340

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+  E   K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   I L+ L+   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334

Query: 121 ELKWD 125
            + +D
Sbjct: 335 -ISFD 338


>gi|57168357|ref|ZP_00367491.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           coli RM2228]
 gi|305432773|ref|ZP_07401932.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           coli JV20]
 gi|57020165|gb|EAL56839.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           coli RM2228]
 gi|304444170|gb|EFM36824.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           coli JV20]
          Length = 340

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+ +    K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFNENNINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   I L+ ++   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLVAINLDKIYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334

Query: 121 ELKWD 125
            + +D
Sbjct: 335 -ISFD 338


>gi|293401949|ref|ZP_06646089.1| ribonucleoside-diphosphate reductase, beta subunit
           [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291304607|gb|EFE45856.1| ribonucleoside-diphosphate reductase, beta subunit
           [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 347

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L+T    ++ + ML      EI +    +     GL 
Sbjct: 219 RDENTHLWLFRSMILELQKEEPQLFTPALVEEYKDMLRYGVEEEIRWGSYVIGNDIEGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
                +Y+ ++ N R   +G   L++ Y + P    W+S   +    + +FFE R + Y 
Sbjct: 279 MQMVREYIYYLGNLRSTSLGFGTLYEGYEKEPASMEWVSMYANANLIKTDFFEARSSAYA 338

Query: 118 QGAELKWD 125
           + + L  D
Sbjct: 339 KSSALVDD 346


>gi|303234233|ref|ZP_07320879.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
           magna BVS033A4]
 gi|302494774|gb|EFL54534.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
           magna BVS033A4]
          Length = 347

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I  +K E P L+T+E   + + M+ +    EI +A   + +   GL+
Sbjct: 219 RDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGAEAEIEWAKYVIGEKIQGLS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKY--TENP-FPWMSEVIDLKK-EKNFFETRVTEYQ 117
               E Y++++ N R   +G   ++     E P   W+SE  D  K + +FFE + + Y 
Sbjct: 279 IKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIKTDFFEAKPSAYS 338

Query: 118 QGAELKWD 125
           + A ++ D
Sbjct: 339 KSAIIEDD 346


>gi|302379704|ref|ZP_07268189.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
           magna ACS-171-V-Col3]
 gi|302312611|gb|EFK94607.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
           magna ACS-171-V-Col3]
          Length = 347

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I  +K E P L+T+E   + + M+ +    EI +A   + +   GL+
Sbjct: 219 RDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGAEAEIEWAKYVIGEKIQGLS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKY--TENP-FPWMSEVIDLKK-EKNFFETRVTEYQ 117
               E Y++++ N R   +G   ++     E P   W+SE  D  K + +FFE + + Y 
Sbjct: 279 IKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIKTDFFEAKPSAYS 338

Query: 118 QGAELKWD 125
           + A ++ D
Sbjct: 339 KSAIIEDD 346


>gi|194319980|pdb|2VUX|A Chain A, Human Ribonucleotide Reductase, Subunit M2 B
 gi|194319981|pdb|2VUX|B Chain B, Human Ribonucleotide Reductase, Subunit M2 B
          Length = 326

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 9/106 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 230 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 282

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + N
Sbjct: 283 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTN 326


>gi|126664354|ref|ZP_01735338.1| Ribonucleotide reductase, beta subunit [Marinobacter sp. ELB17]
 gi|126630680|gb|EBA01294.1| Ribonucleotide reductase, beta subunit [Marinobacter sp. ELB17]
          Length = 352

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 47/124 (37%), Positives = 70/124 (56%), Gaps = 3/124 (2%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H +FG+ V+NQI  E    +     +  R M  E+   E  YA+  +    +G 
Sbjct: 232 LRDEAMHFSFGLKVVNQILEEENISFDP---KAVRDMWDESEAAESDYANYILRDPILGY 288

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A    +  +F+ANRR   + L   F   +N  PW+ E   ++KEKNFFETRV EYQ GA
Sbjct: 289 SAEYHIEQFRFVANRRARTVNLPEPFPGAKNVSPWLEEQATMRKEKNFFETRVIEYQTGA 348

Query: 121 ELKW 124
           +L+W
Sbjct: 349 QLEW 352


>gi|237749822|ref|ZP_04580302.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           bilis ATCC 43879]
 gi|229374572|gb|EEO24963.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           bilis ATCC 43879]
          Length = 351

 Score =  134 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 2/119 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL     +I   + E P L+T+  Q +   M  +A  LE ++         +GL 
Sbjct: 226 RDEITHLTIFQQMIISTRKERPDLFTQALQDEVMEMFRQAVDLESSWGEYITQGQILGLT 285

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQG 119
           A    QY++++A++R   +    L+  T+NP  W+ E ++   +  NFFE +V  Y +G
Sbjct: 286 AKIIRQYIEYLADKRLKAVDYPILYN-TQNPIQWVDEQVNFNNQRTNFFEAKVRNYTRG 343


>gi|154149104|ref|YP_001405803.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           hominis ATCC BAA-381]
 gi|153805113|gb|ABS52120.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           hominis ATCC BAA-381]
          Length = 340

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+  +   K   M  +A  LEI +         +GL 
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFNDKNIAKIYEMFEKAGELEIKWGKYITQNQIMGLT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ + R   IGL   +    +P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DEIIEEYIHYLVDNRLSAIGLNKKYN-ARHPIKWVDDFAKFNDQKSNFFESKVTNYSKGS 334

Query: 121 ELKWD 125
            L +D
Sbjct: 335 -LNFD 338


>gi|190572323|ref|YP_001970168.1| putative ribonucleotide diphosphate reductase, small chain
           [Stenotrophomonas maltophilia K279a]
 gi|190010245|emb|CAQ43853.1| putative ribonucleotide diphosphate reductase, small chain
           [Stenotrophomonas maltophilia K279a]
          Length = 339

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 42/126 (33%), Positives = 72/126 (57%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H+ F  + +  ++ E P L+ +E +Q+   ML EA   E+ +A + +  G  G++
Sbjct: 213 RDESAHMEFAFESVRVVREEEPDLFDEEMKQQVYDMLAEAIECEVQFAEDVLSGGVAGIS 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
                QY+Q  A++   ++G+E  +    NP P+M E+ D+++  NFFE RV+ YQ G  
Sbjct: 273 TRDMRQYLQHCADQHFAKLGMEKKYN-VRNPLPFM-ELQDVQELTNFFERRVSAYQVGVQ 330

Query: 120 AELKWD 125
            E+ +D
Sbjct: 331 GEVAFD 336


>gi|153952438|ref|YP_001397460.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. doylei 269.97]
 gi|152939884|gb|ABS44625.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. doylei 269.97]
          Length = 340

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN +  E P L+  E   K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVHKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   I L+ L+   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334

Query: 121 ELKWD 125
            + +D
Sbjct: 335 -ISFD 338


>gi|28493649|ref|NP_787810.1| ribonucleotide-diphosphate reductase subunit beta [Tropheryma
           whipplei str. Twist]
 gi|28572842|ref|NP_789622.1| ribonucleotide-diphosphate reductase subunit beta [Tropheryma
           whipplei TW08/27]
 gi|28410975|emb|CAD67360.1| ribonucleotide-diphosphate reductase small chain [Tropheryma
           whipplei TW08/27]
 gi|28476691|gb|AAO44779.1| ribonucleotide reductase beta chain [Tropheryma whipplei str.
           Twist]
          Length = 327

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 46/116 (39%), Positives = 69/116 (59%), Gaps = 1/116 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FGI++I  +  ENP L T +F  + R M+     +E  Y H+ +P G +GL
Sbjct: 205 VRDESLHLKFGINLILTVLEENPDLQTSDFADEIRGMIIAGVEMEEEYNHDLLPNGILGL 264

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
           N+    QY++++A+RR  ++G +P +  T NP  WM+   D  +  NFFE   T Y
Sbjct: 265 NSGYINQYVKYLADRRLEELGFDPEYNVT-NPAKWMATANDTFELVNFFEAINTSY 319


>gi|304321610|ref|YP_003855253.1| ribonucleoside-diphosphate reductase subunit beta [Parvularcula
           bermudensis HTCC2503]
 gi|303300512|gb|ADM10111.1| ribonucleoside-diphosphate reductase, beta subunit [Parvularcula
           bermudensis HTCC2503]
          Length = 340

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 3/126 (2%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDESLH    + + ++   E   L T                LE  +       G   G
Sbjct: 197 IRDESLHCEGMVRLFHEFARETGAL-TPAVADDIVDCCKTVVDLEDKFIELAFEAGEVEG 255

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     + Y++ IA+ R  Q+GL P+F    +P PW+ E+++  +  NFFE R TEY +G
Sbjct: 256 MTPDDIKAYIRHIADWRLSQLGLPPVFAADNHPLPWLREILNGVEHANFFEARATEYSKG 315

Query: 120 AE-LKW 124
           A   +W
Sbjct: 316 ATRGEW 321


>gi|254521240|ref|ZP_05133295.1| ribonucleoside-diphosphate reductase, beta subunit
           [Stenotrophomonas sp. SKA14]
 gi|219718831|gb|EED37356.1| ribonucleoside-diphosphate reductase, beta subunit
           [Stenotrophomonas sp. SKA14]
          Length = 339

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 42/126 (33%), Positives = 71/126 (56%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H+ F  + +  ++ E P L+  E +Q+   ML EA   E+ +A + +  G  G++
Sbjct: 213 RDESAHMEFAFESVRVVREEEPDLFDDEMKQQVYDMLAEAIECEVQFAEDVLSGGVAGIS 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
                QY+Q  A++   ++G+E  +    NP P+M E+ D+++  NFFE RV+ YQ G  
Sbjct: 273 TRDMRQYLQHCADQHFAKLGMEKKYN-VRNPLPFM-ELQDVQELTNFFERRVSAYQVGVQ 330

Query: 120 AELKWD 125
            E+ +D
Sbjct: 331 GEVAFD 336


>gi|315637824|ref|ZP_07893014.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           upsaliensis JV21]
 gi|315482065|gb|EFU72679.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           upsaliensis JV21]
          Length = 340

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+ ++   K  +M   A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFNEQNIDKIYSMFKRAGELEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   I L+ ++   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLIAINLDRIYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334

Query: 121 ELKWD 125
            + +D
Sbjct: 335 -ISFD 338


>gi|297587320|ref|ZP_06945965.1| ribonucleotide-diphosphate reductase beta subunit [Finegoldia magna
           ATCC 53516]
 gi|297575301|gb|EFH94020.1| ribonucleotide-diphosphate reductase beta subunit [Finegoldia magna
           ATCC 53516]
          Length = 354

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I  +K E P L+T+E   + + M+ + +  EI +A   + +   GL+
Sbjct: 226 RDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGSEAEIEWAKYVIGEKIQGLS 285

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKY--TENP-FPWMSEVIDLKK-EKNFFETRVTEYQ 117
               E Y++++ N R   +G   ++     E P   W+SE  D  K + +FFE + + Y 
Sbjct: 286 IKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIKTDFFEAKPSAYS 345

Query: 118 QGAELKWD 125
           + A ++ D
Sbjct: 346 KSAIIEDD 353


>gi|62866936|gb|AAY17359.1| ribonucleotide reductase small subunit [Haemonchus contortus]
          Length = 374

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 9/121 (7%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DE +H    +  I  IK        K  Q++   ++ +A  +E  +  E++P   +G+N 
Sbjct: 250 DEGVHAISHVCCIQHIK-------NKLSQERIYYIIRDAVAIEQEFLSESLPVDMIGMNC 302

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122
               QY++++A+    ++G E + K ++NPF +M E I +  + NFFE +V+EYQ+   L
Sbjct: 303 RLMCQYIEYVADHLLVELGCEKICK-SKNPFDFM-ENISIDGKTNFFEKKVSEYQRPGVL 360

Query: 123 K 123
            
Sbjct: 361 S 361


>gi|160915703|ref|ZP_02077911.1| hypothetical protein EUBDOL_01712 [Eubacterium dolichum DSM 3991]
 gi|158432179|gb|EDP10468.1| hypothetical protein EUBDOL_01712 [Eubacterium dolichum DSM 3991]
          Length = 353

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     ++ ++K E P L+T E  +  + ML      E+ +A   + +   GL 
Sbjct: 225 RDENTHLWLFRSILLELKKEEPQLFTPEHIEIYKGMLKHGVEEEVKWAEYVLGERMEGLT 284

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLK-KEKNFFETRVTEYQ 117
                 Y+ ++ N R + +G   L+  Y + P    W+S   +    + +FFE + T Y 
Sbjct: 285 MEMVADYIHYLGNLRSNALGFGSLYDGYEKEPASMEWVSMYSNANIIKTDFFEAKSTAYA 344

Query: 118 QGAELKWD 125
           + + L  D
Sbjct: 345 KSSALVDD 352


>gi|83859670|ref|ZP_00953190.1| ribonucleotide-diphosphate reductase beta subunit [Oceanicaulis
           alexandrii HTCC2633]
 gi|83852029|gb|EAP89883.1| ribonucleotide-diphosphate reductase beta subunit [Oceanicaulis
           alexandrii HTCC2633]
          Length = 348

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 3/126 (2%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDESLH    + + +    E   L TK  +            LE  +       G   G
Sbjct: 197 VRDESLHCEGMMKLFHTFAEETGAL-TKGVKDDIADCCKTVVSLEDKFIELAFEAGEVEG 255

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     + Y+++IA+ R  Q+ L  ++   E+P PW++E+++  +  NFFE R TEY +G
Sbjct: 256 MTPEDIKNYIRYIADWRMKQLKLPTIYGVEEHPIPWLTEILNGVEHANFFEARATEYSKG 315

Query: 120 A-ELKW 124
           A +  W
Sbjct: 316 ATQGDW 321


>gi|158430770|pdb|2RCC|A Chain A, Crystal Structure Of Putative Class I Ribonucleotide
           Reductase (Np_241368.1) From Bacillus Halodurans At 1.90
           A Resolution
 gi|158430771|pdb|2RCC|B Chain B, Crystal Structure Of Putative Class I Ribonucleotide
           Reductase (Np_241368.1) From Bacillus Halodurans At 1.90
           A Resolution
 gi|158430772|pdb|2RCC|C Chain C, Crystal Structure Of Putative Class I Ribonucleotide
           Reductase (Np_241368.1) From Bacillus Halodurans At 1.90
           A Resolution
          Length = 346

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 2/122 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH+    ++  ++ +E P L T+E +   +T L +A  LE  +    +     G+N
Sbjct: 218 RDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLXKAADLEKDWFRYIIGDKIPGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
               E Y+ FIAN+R  Q+G E  +   + NP  W+    D+   + +FFE +  +Y + 
Sbjct: 278 PEDXETYISFIANKRAVQLGXEKPYPEIKHNPXKWIRAYEDVNSGKSDFFEQKSRQYAKV 337

Query: 120 AE 121
           + 
Sbjct: 338 SA 339


>gi|320107274|ref|YP_004182864.1| Ribonucleoside-diphosphate reductase [Terriglobus saanensis SP1PR4]
 gi|319925795|gb|ADV82870.1| Ribonucleoside-diphosphate reductase [Terriglobus saanensis SP1PR4]
          Length = 346

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/118 (33%), Positives = 67/118 (56%), Gaps = 2/118 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES HL F  +V+  ++ + P LW  E +++   M+ EA   E  +A + +  G  GL+
Sbjct: 220 RDESAHLEFAFEVVQVVRAQEPDLWDTELERQVVVMMEEAIDAEAQFAEDLLSGGVAGLS 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY+ ++A+ R  ++G+   F   +NPF +M E+ D+++  NFFE RV+ YQ  
Sbjct: 280 VRDMRQYLGYVADSRLERLGIGAHFN-AKNPFSFM-ELQDVQELTNFFERRVSAYQTA 335


>gi|238023979|ref|YP_002908211.1| Ribonucleotide reductase subunit beta [Burkholderia glumae BGR1]
 gi|237878644|gb|ACR30976.1| Ribonucleotide reductase, beta subunit [Burkholderia glumae BGR1]
          Length = 337

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 52/124 (41%), Positives = 66/124 (53%), Gaps = 3/124 (2%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDE LH  FGI VI Q+  E  HL         + +  EA   E AYA   +    +G 
Sbjct: 216 MRDEVLHCGFGIRVIRQLLEEE-HLRLDPH--AVQQIWEEAEAAERAYAQYILRDPILGY 272

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A    +  +FIANRR  Q+ +   F    N  PW+ E  +L+KEKNFFETRVT+YQ G 
Sbjct: 273 SAELHCEQFRFIANRRATQLSMPAPFPGATNALPWLDEQANLRKEKNFFETRVTDYQSGG 332

Query: 121 ELKW 124
            L W
Sbjct: 333 ALDW 336


>gi|291239432|ref|XP_002739627.1| PREDICTED: hCG23833-like [Saccoglossus kowalevskii]
          Length = 309

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F   +  +IK   P         K R ++ E   +E  +    + K  +G+N
Sbjct: 190 RDEGLHCTFACTMYGKIKPRLPD-------TKVRKIVLEGCEVEKLFVKHALRKPLLGMN 242

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           +   E Y+ F+ +     +G E  F    NPFP+M   I ++ + NFFE RVTEY +
Sbjct: 243 SHLMETYVNFVTDNLLTDLGYEKEF-GVNNPFPFMD-NISMQGKTNFFERRVTEYTR 297


>gi|222824493|ref|YP_002576067.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           lari RM2100]
 gi|222539714|gb|ACM64815.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           lari RM2100]
          Length = 340

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+      K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERADLFNDTNVSKIYDMFKKAGELEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   I L+ ++   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLIAINLDKIYN-VKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334

Query: 121 ELKWD 125
            L +D
Sbjct: 335 -LSFD 338


>gi|221633388|ref|YP_002522613.1| ribonucleotide-diphosphate reductase subunit beta [Thermomicrobium
           roseum DSM 5159]
 gi|221156578|gb|ACM05705.1| ribonucleoside-diphosphate reductase, beta subunit [Thermomicrobium
           roseum DSM 5159]
          Length = 328

 Score =  131 bits (330), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/121 (36%), Positives = 70/121 (57%), Gaps = 1/121 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DESLHL+FGI +I  I  E+P + +  F ++ R ++  A  LE AY    +P+  +GL
Sbjct: 207 LKDESLHLSFGIHLITTILEEHPEIMSAAFGRQLRELILRAVELEEAYNRAVLPEPLIGL 266

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A    +Y+++IA+RR  ++GL   F    NP  WM   +D+ +  NFFE R   Y+ G 
Sbjct: 267 DADVLNRYVRYIADRRLEELGLPIAF-GEPNPLRWMVAQVDMPEIVNFFEARNIHYEVGR 325

Query: 121 E 121
            
Sbjct: 326 A 326


>gi|56555145|gb|AAV98100.1| RR2 protein [Shrimp white spot syndrome virus]
          Length = 328

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 8/111 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   ++ +  ++ P       +++   ++ EA  +E  +   ++P   VG+N
Sbjct: 226 RDEGLHRDFACMLLKKGFVDTP------SRERILEIVTEAVRIEQEFLTVSLPVKLVGMN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 112
                QY++F+A++   ++GLE  +  T NPFP+M   I L+ + NFFE R
Sbjct: 280 CKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMD-NISLENKTNFFEKR 328


>gi|297736972|emb|CBI26173.3| unnamed protein product [Vitis vinifera]
          Length = 312

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 9/102 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P        QK   ++HEA  +E  +  E +P   +G+N
Sbjct: 171 RDEGLHCDFACLLYSLLQKQLPW-------QKVHHIVHEAVEIETQFVCEALPCALIGMN 223

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK 103
           A    QY++F+A+R    +G E  +   ENPF WM E I L+
Sbjct: 224 ATLMSQYIKFVADRLLVALGYERKYN-VENPFDWM-EFISLQ 263


>gi|163781846|ref|ZP_02176846.1| ribonucleotide reductase beta chain [Hydrogenivirga sp. 128-5-R1-1]
 gi|159883066|gb|EDP76570.1| ribonucleotide reductase beta chain [Hydrogenivirga sp. 128-5-R1-1]
          Length = 350

 Score =  130 bits (329), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+    ++I  ++ E P L++ E ++        A   EI +         +G+N
Sbjct: 226 RDELTHVTLFRNMILNLQKEQPELFSPEIKKWIAEYFRYAIDQEIKWGQYVTQDQILGIN 285

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
               ++Y++++ N R  QIGLEPL+ + TENP  W+ +   +   + +FF+ +   Y + 
Sbjct: 286 NQLIDRYIKYLGNLRITQIGLEPLYPEITENPMKWIDDFRKINNTKTDFFQRKPQTYAKA 345

Query: 120 AELKW 124
            ELKW
Sbjct: 346 NELKW 350


>gi|317062933|ref|ZP_07927418.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           ulcerans ATCC 49185]
 gi|313688609|gb|EFS25444.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           ulcerans ATCC 49185]
          Length = 353

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 36/130 (27%), Positives = 67/130 (51%), Gaps = 9/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +I+ ENP  +  E   +  +M  +A   EI + +  +    +G+ 
Sbjct: 225 RDELSHVVIFQHLLKEIRNENPDFFNDE---EIYSMFRKAVEQEINWTNHIIGNQILGIT 281

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK----EKNFFETRVTEY 116
             + EQY +++AN R   IGL+P+++   +NP+  +++  D +     + NFFE  VT Y
Sbjct: 282 EETTEQYTKWLANERLRSIGLKPIYEGFNKNPYKHLTKFADTEGEGNVKANFFEGTVTSY 341

Query: 117 QQGAELK-WD 125
              + +  WD
Sbjct: 342 NMSSSIDGWD 351


>gi|15606660|ref|NP_214040.1| ribonucleotide reductase beta chain [Aquifex aeolicus VF5]
 gi|18202109|sp|O67475|RIR2_AQUAE RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit;
           Contains: RecName: Full=Aae nrdB intein; AltName:
           Full=Aae RIR2 intein
 gi|2983879|gb|AAC07431.1| ribonucleotide reductase beta chain [Aquifex aeolicus VF5]
          Length = 696

 Score =  130 bits (327), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 7   HLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCE 66
           H+    ++IN ++ ENP L+T E ++        A   EI +         +G+N    E
Sbjct: 577 HVTLFRNIINTLRKENPELFTPEIEKWIVEYFKYAVNEEIKWGQYVTQNQILGINDVLIE 636

Query: 67  QYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGAELKW 124
           +Y++++ N R  QIG +P++ + TENP  W+ E   +   + +FF+ +   Y +  ELKW
Sbjct: 637 RYIKYLGNLRITQIGFDPIYPEVTENPLKWIDEFRKINNTKTDFFQAKPQTYSKANELKW 696


>gi|319942042|ref|ZP_08016361.1| ribonucleoside-diphosphate reductase subunit beta [Sutterella
           wadsworthensis 3_1_45B]
 gi|319804426|gb|EFW01304.1| ribonucleoside-diphosphate reductase subunit beta [Sutterella
           wadsworthensis 3_1_45B]
          Length = 344

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 2/119 (1%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LN 61
           DE+LH      +  +   ENP LWT E + K   +      LE  +         +  L 
Sbjct: 213 DETLHTESMTKIFREYITENPELWTDELKAKIYGIAEVMVDLEDKFIDLAFGVSEMKRLT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                 Y+++IA+RR   +GL+ +FK T NP PW+  ++      NFFE RV +Y +GA
Sbjct: 273 REDVRSYIRYIADRRLMGLGLKGIFKSTTNPLPWVDAML-GVTHTNFFENRVVDYAKGA 330


>gi|313836278|gb|EFS73992.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL037PA2]
 gi|314928743|gb|EFS92574.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL044PA1]
 gi|314971220|gb|EFT15318.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL037PA3]
 gi|328906508|gb|EGG26283.1| ribonucleotide-diphosphate reductase subunit beta
           [Propionibacterium sp. P08]
          Length = 324

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 45/120 (37%), Positives = 71/120 (59%), Gaps = 5/120 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +P+G  G+
Sbjct: 204 VRDESLHLKFGMNLILTVLEENPDIATDEFAVEIHDMILKGVEMEAQYNRDMLPRGIPGM 263

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA     Y++++A+RR  ++GLEP + +  NP  WM+   D  +  NFFET  T Y+  A
Sbjct: 264 NA----DYVKYLADRRLEELGLEPEY-HVANPAKWMATANDTLQLVNFFETTNTSYEVNA 318


>gi|257468678|ref|ZP_05632772.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           ulcerans ATCC 49185]
          Length = 348

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 36/130 (27%), Positives = 67/130 (51%), Gaps = 9/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +I+ ENP  +  E   +  +M  +A   EI + +  +    +G+ 
Sbjct: 220 RDELSHVVIFQHLLKEIRNENPDFFNDE---EIYSMFRKAVEQEINWTNHIIGNQILGIT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK----EKNFFETRVTEY 116
             + EQY +++AN R   IGL+P+++   +NP+  +++  D +     + NFFE  VT Y
Sbjct: 277 EETTEQYTKWLANERLRSIGLKPIYEGFNKNPYKHLTKFADTEGEGNVKANFFEGTVTSY 336

Query: 117 QQGAELK-WD 125
              + +  WD
Sbjct: 337 NMSSSIDGWD 346


>gi|253582918|ref|ZP_04860136.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           varium ATCC 27725]
 gi|251835124|gb|EES63667.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           varium ATCC 27725]
          Length = 348

 Score =  129 bits (326), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 9/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +I+ ENP  +  E   +   M  +A   EI + +  +    +G+ 
Sbjct: 220 RDELSHVVIFQHLLKEIRNENPDFFNDE---EIYDMFRKAVEQEINWTNHIIGNQILGIT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK----EKNFFETRVTEY 116
             + EQY +++AN R   IGL+P++    +NP+  +++  D +     + NFFE  VT Y
Sbjct: 277 EETTEQYTKWLANERLRSIGLKPIYDGFNKNPYKHLTKFADTEGEGNVKANFFEGTVTSY 336

Query: 117 QQGAELK-WD 125
              + +  WD
Sbjct: 337 NMSSSIDGWD 346


>gi|323487827|ref|ZP_08093085.1| ribonucleotide-diphosphate reductase subunit beta [Planococcus
           donghaensis MPA1U2]
 gi|323398561|gb|EGA91349.1| ribonucleotide-diphosphate reductase subunit beta [Planococcus
           donghaensis MPA1U2]
          Length = 348

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 6/124 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F    I  +  ENP L T E  Q   T + +A  LE  +A   +     GL+
Sbjct: 220 RDEMQHAYFIAQFIRIMLTENPELHTDENIQYIYTTIDKAVQLEKEWAQYIL-ADIEGLD 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM----SEVIDLKKEKNFFETRVTEYQ 117
                +Y++++AN+R  Q+GL+ L++   NP PW+     ++++   + +FFE +   Y 
Sbjct: 279 LVEFGEYVEYLANKRLRQLGLDNLYEERSNPMPWIQVFGDDMMN-DTKSDFFEQKSRTYT 337

Query: 118 QGAE 121
           + ++
Sbjct: 338 KVSQ 341


>gi|303389600|ref|XP_003073032.1| ribonucleoside-diphosphate reductase small subunit [Encephalitozoon
           intestinalis ATCC 50506]
 gi|303302176|gb|ADM11672.1| ribonucleoside-diphosphate reductase small subunit [Encephalitozoon
           intestinalis ATCC 50506]
          Length = 326

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 61/118 (51%), Gaps = 10/118 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F   +  +          K+  ++ + ++ +A  +E  +  E++P   +G+N
Sbjct: 202 RDEGLHCEFACLLHRRYL--------KQKCKRVKEVVMDAVEVEKRFLSESLPVDLIGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                +Y++F+A+     +  E ++ +T NPF +M E I L  + NFF+ R ++YQ+ 
Sbjct: 254 CQLMCKYIEFVADTLLENLEEEKIY-HTPNPFDFM-ENISLVGKTNFFDKRESQYQKA 309


>gi|328950373|ref|YP_004367708.1| Ribonucleoside-diphosphate reductase [Marinithermus hydrothermalis
           DSM 14884]
 gi|328450697|gb|AEB11598.1| Ribonucleoside-diphosphate reductase [Marinithermus hydrothermalis
           DSM 14884]
          Length = 332

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 43/119 (36%), Positives = 70/119 (58%), Gaps = 1/119 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DESLHL+FG+ +I     E   + T    ++ R ++ EA  LE AY    +P+  +GL
Sbjct: 211 LKDESLHLSFGLHLITGFLEEYSEVMTPRLAREVRGLILEAVQLERAYNQALLPRPILGL 270

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +A +   Y++++A+RR  ++GLE  F  T NP  WM+  +D+ +  NFFE   T Y+ G
Sbjct: 271 SAETLNAYVEYVADRRLEELGLEAAF-GTPNPAKWMATEVDVPEIVNFFEAVNTSYEVG 328


>gi|257458932|ref|ZP_05624052.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           gracilis RM3268]
 gi|257443636|gb|EEV18759.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           gracilis RM3268]
          Length = 340

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+ K    K   M   A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERADLFNKRNVDKIYEMFETAGNLEIDWGKYITDNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   IGLE  +   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLLAIGLEKRYD-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334

Query: 121 ELKWD 125
            L +D
Sbjct: 335 -LSFD 338


>gi|224372455|ref|YP_002606827.1| ribonucleotide-diphosphate reductase subunit beta [Nautilia
           profundicola AmH]
 gi|223589410|gb|ACM93146.1| ribonucleoside-diphosphate reductase, beta subunit [Nautilia
           profundicola AmH]
          Length = 346

 Score =  128 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 3/122 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H     ++  +IK E P L+T E  +  + ML+ A  LE  +         +G++
Sbjct: 219 RDEVTHTLLFANIFKEIKKEFPDLFTPEVIKNIKDMLYAAYELERDWGWYITNDEILGMS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKK-EKNFFETRVTEYQQ 118
               +++ Q++AN+R   +GL+ LF     +NP  W        + + NFFE  V  Y +
Sbjct: 279 KELIDRFTQYLANKRAQAMGLDLLFPEVGLKNPISWFDGFSSFNEQKTNFFEGNVVNYSK 338

Query: 119 GA 120
           G+
Sbjct: 339 GS 340


>gi|288554979|ref|YP_003426914.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           pseudofirmus OF4]
 gi|288546139|gb|ADC50022.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus
           pseudofirmus OF4]
          Length = 344

 Score =  128 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 2/122 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH+    +V  ++  E+P L  +E +   +  L  A  LE+ + +  + +   G+ 
Sbjct: 216 RDEQLHVYLFTNVFKELLEEHPELNNREMESFVKQSLTTAVELELKWYNYIIGEQIEGVT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
           +     Y++FIAN+R  Q+G + +F ++  N F W+    D+   + +FFE +  +Y + 
Sbjct: 276 SDEMGSYLKFIANKRAKQLGYDHIFPEHRTNVFKWIKAYEDVNAAKSDFFEQKSRQYAKV 335

Query: 120 AE 121
           + 
Sbjct: 336 SS 337


>gi|269105083|ref|ZP_06157778.1| ribonucleotide reductase 2 [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268160718|gb|EEZ39216.1| ribonucleotide reductase 2 [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 310

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 10/126 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +         K  QQ+   +  EA  +E  +  E +P   +G+N
Sbjct: 190 RDEGLHFSFSALLFKTLGQG------KVTQQEFEEICREAVSIEKEFVTEALPVDLIGMN 243

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
           A    QY++  A+      G +P+F Y +NPF +M  ++D++ + NFFE RVTEY++   
Sbjct: 244 AELMCQYIEHTADVIAGLFGFDPIF-YAKNPFDYM-RLLDMEGKTNFFEKRVTEYKRPQD 301

Query: 120 AELKWD 125
            +L +D
Sbjct: 302 RQLSFD 307


>gi|323143005|ref|ZP_08077711.1| ribonucleoside-diphosphate reductase, beta subunit [Succinatimonas
           hippei YIT 12066]
 gi|322417199|gb|EFY07827.1| ribonucleoside-diphosphate reductase, beta subunit [Succinatimonas
           hippei YIT 12066]
          Length = 331

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 3/124 (2%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGLN 61
           DE+LH    I +  +   +NP LW  + +    ++  +   LE ++            L 
Sbjct: 201 DETLHTESMIKLFREYIEQNPQLWNDDLKSTIYSIAEKMVELEDSFIDLAFGVNQMQKLA 260

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA- 120
               ++Y++FIA+RR   +G++ +F   +NP PW+  ++      NFFE RV +Y +GA 
Sbjct: 261 KEDVKKYIRFIADRRLSAMGMKAIFNEKKNPLPWVDAML-GVTHTNFFENRVVDYAKGAL 319

Query: 121 ELKW 124
              W
Sbjct: 320 SGDW 323


>gi|149194868|ref|ZP_01871962.1| ribonucleotide-diphosphate [Caminibacter mediatlanticus TB-2]
 gi|149135027|gb|EDM23509.1| ribonucleotide-diphosphate [Caminibacter mediatlanticus TB-2]
          Length = 346

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 3/122 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H     ++  +IK E P L+T E  +  + ML+ A  LE  +         +GL+
Sbjct: 219 RDEVTHTLLFANIFKEIKKEFPDLFTPEVIRNIKDMLYAAYELERDWGFYITNDEILGLS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK--YTENPFPWMSEVIDLKK-EKNFFETRVTEYQQ 118
               +++ +++AN+R H +GLE LF     +NP  W        + + NFFE  V  Y +
Sbjct: 279 KELIDRFTKYLANKRAHAMGLELLFPEIGLKNPISWFDSFSSFNEQKTNFFEGNVVNYSK 338

Query: 119 GA 120
           G+
Sbjct: 339 GS 340


>gi|269963257|ref|ZP_06177590.1| hypothetical protein VME_39740 [Vibrio harveyi 1DA3]
 gi|269832005|gb|EEZ86131.1| hypothetical protein VME_39740 [Vibrio harveyi 1DA3]
          Length = 310

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 10/126 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +         K  QQ+   +  EA  +E  +  E +P   +G+N
Sbjct: 190 RDEGLHFSFSALLFKTLGQG------KVTQQEFEEICREAVSIEKEFVTEALPVDLIGMN 243

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
           A    QY++  A+      G  P+F   ENPF +M  ++D++ + NFFE RVTEY++   
Sbjct: 244 AELMCQYIEHTADVIAGLFGFTPIF-GAENPFDYM-RLLDMEGKTNFFEKRVTEYKRPQD 301

Query: 120 AELKWD 125
            +L +D
Sbjct: 302 RQLSFD 307


>gi|488081|gb|AAA56996.1| ribonucleoside-diphosphate reductase small subunit [Drosophila
           melanogaster]
          Length = 214

 Score =  127 bits (319), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 56/104 (53%), Gaps = 9/104 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +         HL  +  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 120 RDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMN 172

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE 105
                QY++F+A+R   ++G+  ++  T+NPF +M E+I L  +
Sbjct: 173 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGK 214


>gi|330998673|ref|ZP_08322403.1| ribonucleoside-diphosphate reductase, beta subunit [Parasutterella
           excrementihominis YIT 11859]
 gi|329576534|gb|EGG58042.1| ribonucleoside-diphosphate reductase, beta subunit [Parasutterella
           excrementihominis YIT 11859]
          Length = 327

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 5/126 (3%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV---G 59
           DE+LH    I +  +  IENP LWT   +++   +  +   LE A+         +    
Sbjct: 193 DETLHTESMIRLFREYIIENPELWTDSLKKRIYDIAEKMIELEDAFIDLAFGVNDMSKQN 252

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L+    + Y+++I +RR   +G++ +FK   NP PW+  ++      NFFE RV +Y +G
Sbjct: 253 LSPADVKAYIRWICDRRLAAMGMKEIFKVNVNPLPWVDSML-GVTHTNFFENRVVDYAKG 311

Query: 120 A-ELKW 124
           A    W
Sbjct: 312 ALSGSW 317


>gi|194363985|ref|YP_002026595.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
           R551-3]
 gi|194346789|gb|ACF49912.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
           R551-3]
          Length = 339

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/126 (32%), Positives = 70/126 (55%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H++F  + ++ I+ E P L+  + +Q    ML EA   E+ +A + +  G  G++
Sbjct: 213 RDESAHMDFAFECVDVIREEEPDLFDDKMKQDVYDMLAEAIECEVQFAEDVLSGGVAGIS 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
                QY+Q  A+   H++G+E  +    NP  +M E+ D+++  NFFE R + YQ G  
Sbjct: 273 TRDMRQYLQHCADNHFHRLGMERKYN-VRNPLSFM-ELQDVQELTNFFERRASAYQVGVQ 330

Query: 120 AELKWD 125
            E+ +D
Sbjct: 331 GEVAFD 336


>gi|303258316|ref|ZP_07344319.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderiales
           bacterium 1_1_47]
 gi|302858762|gb|EFL81850.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderiales
           bacterium 1_1_47]
          Length = 328

 Score =  125 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 5/126 (3%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV---G 59
           DE+LH    I +  +  IENP LWT   +++   +  +   LE A+         +    
Sbjct: 194 DETLHTESMIRLFREYIIENPELWTDSLKKRIYDIAEKMIELEDAFIDLAFGVNDMSKQN 253

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L+    + Y+++I +RR   +G++ +FK   NP PW+  ++      NFFE RV +Y +G
Sbjct: 254 LSPADVKAYIRWICDRRLAAMGMKEIFKVNVNPLPWVDSML-GVTHTNFFENRVVDYAKG 312

Query: 120 A-ELKW 124
           A    W
Sbjct: 313 ALSGSW 318


>gi|163801385|ref|ZP_02195284.1| ribonucleoside-diphosphate reductase 1, beta subunit [Vibrio sp.
           AND4]
 gi|159174874|gb|EDP59674.1| ribonucleoside-diphosphate reductase 1, beta subunit [Vibrio sp.
           AND4]
          Length = 310

 Score =  125 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 10/126 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +         K  QQ+   +  EA  +E  +  E +P   +G+N
Sbjct: 190 RDEGLHFSFSALLFKTLGQG------KVTQQEFEEICREAVSIEKEFVTEALPVDLIGMN 243

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
           A    QY++  A+      G  P F  +ENPF +M  ++D++ + NFFE RVTEY++   
Sbjct: 244 AELMCQYIEHTADVIADLFGFNPAF-GSENPFDYM-RLLDMEGKTNFFEKRVTEYKRPQD 301

Query: 120 AELKWD 125
            +L +D
Sbjct: 302 RQLSFD 307


>gi|50288235|ref|XP_446546.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525854|emb|CAG59473.1| unnamed protein product [Candida glabrata]
          Length = 335

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RD   + +F   +         HL TK   +    ++ EA  +E A+   +MP   +G++
Sbjct: 202 RDRGFYADFACLLF-------AHLKTKPNPKIIEQIITEAVEIEKAHYRNSMPIEKLGMD 254

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
               +QY++ +A++     G E  +  T NPFP+M E   +  + NFFE +V++YQ+ + 
Sbjct: 255 LKEIDQYIESVADKLLVSFGNEKFYNAT-NPFPFMEEATSI-GKTNFFEKKVSDYQKASA 312

Query: 122 LK 123
             
Sbjct: 313 TS 314


>gi|167461830|ref|ZP_02326919.1| ribonucleoside-diphosphate reductase beta subunit [Paenibacillus
           larvae subsp. larvae BRL-230010]
 gi|322383591|ref|ZP_08057349.1| ribonucleotide-diphosphate reductase subunit beta-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
 gi|321152059|gb|EFX44995.1| ribonucleotide-diphosphate reductase subunit beta-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
          Length = 343

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 4/123 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ H  F  +V   +  + P L T E  Q     + +A  LE  +AH  +     G++
Sbjct: 215 RDEAQHAYFFGEVFKLLLTDFPELNTSERIQYVYDTIDQAVKLEEKWAHYVL-NQIDGID 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID---LKKEKNFFETRVTEYQQ 118
                +Y++FIAN+R   +GL+P ++  +N  PW+    D    + + +FFE +   Y +
Sbjct: 274 LDDFSRYIRFIANKRLKTMGLQPAYEGVDNCMPWIRPFSDEALNQTKTDFFEAKSRTYAK 333

Query: 119 GAE 121
            ++
Sbjct: 334 VSD 336


>gi|332971065|gb|EGK10035.1| ribonucleotide-diphosphate reductase beta subunit [Desmospora sp.
           8437]
          Length = 342

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 2/122 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH+   + +  ++  E P L T+E +         A  LEI +    +   F G+ 
Sbjct: 214 RDEQLHVRLFVQIYRELLEEIPELNTEENRNFVTESFRRAAELEIRWGETVLGDRFDGIR 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
                 Y++F+AN+R H++G E  F  Y +NP  W+    D+   +++FFE +  +Y + 
Sbjct: 274 PDELRAYIRFMANKRAHELGAERPFAGYRKNPMRWVIAYQDVNRGKQDFFEGKSRQYSKV 333

Query: 120 AE 121
           + 
Sbjct: 334 SS 335


>gi|254796877|ref|YP_003081714.1| ribonucleoside-diphosphate reductase, beta subunit [Neorickettsia
           risticii str. Illinois]
 gi|254590113|gb|ACT69475.1| ribonucleoside-diphosphate reductase, beta subunit [Neorickettsia
           risticii str. Illinois]
          Length = 286

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 3/127 (2%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH N    +     +EN     K  + + R +       E A+       G   G
Sbjct: 153 VRDETLHSNSITKLFRTFLLENDIDKLK-LEAEIREICDAMVHHEDAFIDLAFEMGDVEG 211

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A   ++Y+++IAN R  Q+G   +++   NP  W+  V++  +  NFFE + TEY + 
Sbjct: 212 LKASEVKEYIRYIANLRLKQLGFSEIYEQKVNPLLWLEAVLNTVEHTNFFENKATEYSKA 271

Query: 120 AE-LKWD 125
           A    WD
Sbjct: 272 ATKGTWD 278


>gi|322510501|gb|ADX05815.1| putative ribonucleotide reductase small subunit [Organic Lake
           phycodnavirus 1]
          Length = 324

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 37/116 (31%), Positives = 71/116 (61%), Gaps = 9/116 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+LH  F + + ++++ +      +E  +       EA ++E  +  E++P   +G+N
Sbjct: 201 RDEALHTEFAVHLFHKLEKKINKKKIREIIE-------EAVVIEKEFIVESLPCRLIGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
           +    QY++++A+R   Q+G E +++ T NPF +M E+I L+++ NFFE+RV+EY 
Sbjct: 254 SDLMTQYIEYVADRLMIQLGCEEIYR-TNNPFDFM-ELISLEQKTNFFESRVSEYS 307


>gi|295401051|ref|ZP_06811025.1| Ribonucleoside-diphosphate reductase [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312112173|ref|YP_003990489.1| ribonucleotide reductase [Geobacillus sp. Y4.1MC1]
 gi|294976844|gb|EFG52448.1| Ribonucleoside-diphosphate reductase [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311217274|gb|ADP75878.1| ribonucleotide reductase [Geobacillus sp. Y4.1MC1]
          Length = 346

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 2/119 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H++    +  ++  E P   T E  +  +    +A  LEI +A+  +     G++
Sbjct: 218 RDEHIHVDLFAKIFKEVLSEYPEYNTPELAEFVQATFTKAAELEIEWANYIIGNDIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQ 118
                 Y++F AN R HQ+G E  F  Y  NP  W+    ++   + +FFE +  +Y +
Sbjct: 278 MHDLSAYIKFYANVRAHQLGFERPFAGYRTNPLRWIKAYEEVDLGKSDFFEQKSRQYTK 336


>gi|253574542|ref|ZP_04851883.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           sp. oral taxon 786 str. D14]
 gi|251846247|gb|EES74254.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           sp. oral taxon 786 str. D14]
          Length = 343

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 5/124 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ H  F  +V  Q+ I+ P L TKE    +   +  A  LE  +AH T+ K   G++
Sbjct: 214 RDENQHCYFFAEVFKQLLIDYPELNTKENIDYAYRTIDRAVELETNWAHYTL-KNVPGID 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LK-KEKNFFETRVTEYQ 117
                 Y+++IAN+R   +GLE  +   + N  PW+    D  L   + +FFE +   Y 
Sbjct: 273 LNELSDYIKYIANKRLTLMGLEKAYAGVDINCMPWIKPFSDEALNATKTDFFEAKSRNYG 332

Query: 118 QGAE 121
           +  +
Sbjct: 333 KVGD 336


>gi|329922162|ref|ZP_08277907.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           sp. HGF5]
 gi|328942352|gb|EGG38619.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           sp. HGF5]
          Length = 370

 Score =  123 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 5/124 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ H  F  +V  Q+  + P L TKE        +  A  LE  +AH T+     G++
Sbjct: 241 RDENQHCYFFAEVFKQLLKDFPELNTKENIDYLYRTIDRAVELETNWAHYTLSN-VRGID 299

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LK-KEKNFFETRVTEYQ 117
                 Y+++IANRR   +GLE  ++  + N  PW+    D  L   + +FFE +   Y 
Sbjct: 300 LNELSDYIKYIANRRITMMGLEKAYEGVDVNCMPWIKPFSDEALNATKTDFFEAKSRNYG 359

Query: 118 QGAE 121
           +  +
Sbjct: 360 KVGD 363


>gi|319655055|ref|ZP_08009124.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           2_A_57_CT2]
 gi|317393250|gb|EFV74019.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           2_A_57_CT2]
          Length = 345

 Score =  123 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 2/119 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H++  + +  +I  ENP L T E  +  +     A  LEI +A + +     G+ 
Sbjct: 217 RDEQIHVDLFVKIFKEILQENPELNTNELSKFVQETFKRAAELEIEWARDVIGSKTEGIL 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLK-KEKNFFETRVTEYQQ 118
               E Y++F AN RC+Q+G E  F+ Y  NP  W+     +   + +FFE +  +Y +
Sbjct: 277 LSDVEAYIKFYANIRCNQLGYERPFEGYRTNPLRWIVAYEQVDHGKSDFFEQKSRQYTK 335


>gi|257467364|ref|ZP_05631675.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315918494|ref|ZP_07914734.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|313692369|gb|EFS29204.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 344

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 9/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I +IK ENP+ + +E   + R M   A   EI +    +    +G+ 
Sbjct: 216 RDELSHVVLFQKIIREIKAENPNFFQEE---EIRMMFQTAVEQEILWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK----EKNFFETRVTEY 116
             + E Y +++AN R   IGL P++   T+NP+  +    D +     + NFFE  VT Y
Sbjct: 273 TETTEAYTKWLANERLRTIGLAPMYDGFTKNPYKHLERFADTEGDGNVKSNFFEGTVTSY 332

Query: 117 QQGAELK-WD 125
              + +  WD
Sbjct: 333 NMSSSIDGWD 342


>gi|257453171|ref|ZP_05618470.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp.
           3_1_5R]
 gi|317059706|ref|ZP_07924191.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 3_1_5R]
 gi|313685382|gb|EFS22217.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 3_1_5R]
          Length = 344

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 9/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I +IK ENP+ + +E   + R M   A   EI +    +    +G+ 
Sbjct: 216 RDELSHVVLFQKIIREIKAENPNFFQEE---EIRMMFQTAVEQEILWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK----EKNFFETRVTEY 116
             + E Y +++AN R   IGL P++   T+NP+  +    D +     + NFFE  VT Y
Sbjct: 273 TETTEAYTKWLANERLRTIGLAPMYDGFTKNPYKHLERFADTEGDGNVKSNFFEGTVTSY 332

Query: 117 QQGAELK-WD 125
              + +  WD
Sbjct: 333 NMSSSIDGWD 342


>gi|239826135|ref|YP_002948759.1| ribonucleoside-diphosphate reductase [Geobacillus sp. WCH70]
 gi|239806428|gb|ACS23493.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. WCH70]
          Length = 346

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 2/119 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H++    +  ++  E P   T E  Q  R    +A  LEI +A+  +     G++
Sbjct: 218 RDEHIHVDLFAKIFKEVLNEYPEYNTPELAQFVRETFIKAAKLEIEWANYIIGNDIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQ 118
                 Y++F AN R HQ+G +  F  Y  NP  W+    ++   + +FFE +  +Y +
Sbjct: 278 MHDLSAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGKSDFFEQKSRQYTK 336


>gi|261404531|ref|YP_003240772.1| Ribonucleoside-diphosphate reductase [Paenibacillus sp. Y412MC10]
 gi|261280994|gb|ACX62965.1| Ribonucleoside-diphosphate reductase [Paenibacillus sp. Y412MC10]
          Length = 343

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 5/124 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ H  F  +V  Q+  + P L TKE        +  A  LE  +AH T+     G++
Sbjct: 214 RDENQHCYFFAEVFKQLLKDFPELNTKENIDYLYRTIDRAVELETNWAHYTLSN-VRGID 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LK-KEKNFFETRVTEYQ 117
                 Y+++IANRR   +GLE  ++  + N  PW+    D  L   + +FFE +   Y 
Sbjct: 273 LNELSDYIKYIANRRITMMGLEKAYEGVDVNCMPWIKPFSDEALNATKTDFFEAKSRNYG 332

Query: 118 QGAE 121
           +  +
Sbjct: 333 KVGD 336


>gi|88608725|ref|YP_506404.1| ribonucleotide-diphosphate reductase subunit beta [Neorickettsia
           sennetsu str. Miyayama]
 gi|88600894|gb|ABD46362.1| ribonucleoside-diphosphate reductase, beta subunit [Neorickettsia
           sennetsu str. Miyayama]
          Length = 322

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 3/127 (2%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDE+LH N    +     +EN     K  + + R + +     E A+       G   G
Sbjct: 189 VRDETLHSNSITKLFRTFLLENNIDKFK-LEAEIREICNAMVHHEDAFIDLAFEMGDVEG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L A   ++Y+++IAN R  Q+G   +++   NP  W+  V++  +  NFFE + TEY + 
Sbjct: 248 LKASEVKEYIRYIANLRLKQLGFSEIYEQKVNPLLWLEAVLNTVEHTNFFENKATEYSKA 307

Query: 120 AE-LKWD 125
           A    WD
Sbjct: 308 ATKGTWD 314


>gi|118500933|gb|ABK97635.1| ribonucleoside diphosphate reductase beta subunit [Allochromatium
           vinosum DSM 180]
          Length = 280

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 54/81 (66%), Positives = 65/81 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLWT +F+Q+   M+ EA  LE  YAH+TMP+G +GL
Sbjct: 200 LRDESMHMNFGIDVINQIKIENPHLWTPDFRQELVGMIREAVELEARYAHDTMPRGVLGL 259

Query: 61  NAPSCEQYMQFIANRRCHQIG 81
           NA   E Y+ FIANRRC QIG
Sbjct: 260 NAQMFEDYLHFIANRRCAQIG 280


>gi|308067265|ref|YP_003868870.1| ribonucleoside-diphosphate reductase beta subunit (ribonucleotide
           reductase small subunit) [Paenibacillus polymyxa E681]
 gi|305856544|gb|ADM68332.1| Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide
           reductase small subunit) [Paenibacillus polymyxa E681]
          Length = 343

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 5/124 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ H  F  +V  Q+  + P L TKE       M++ A  LE  +AH T+ K   G++
Sbjct: 214 RDENQHCYFFAEVFKQLLSDFPELNTKENTDYVYRMINRAVELETNWAHYTL-KEVRGID 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LK-KEKNFFETRVTEYQ 117
                 Y++++AN R   +G++  ++  + N  PW+    D  L   + +FFE +   Y 
Sbjct: 273 LNELSDYIKYMANMRLRLLGMDKAYEGVDVNCMPWIKPFSDEALNATKTDFFEAKSRNYG 332

Query: 118 QGAE 121
           +  +
Sbjct: 333 KVGD 336


>gi|310639978|ref|YP_003944736.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           polymyxa SC2]
 gi|309244928|gb|ADO54495.1| Ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           polymyxa SC2]
          Length = 343

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 5/124 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ H  F  +V  Q+  + P L TKE       M++ A  LE  +AH T+ K   G++
Sbjct: 214 RDENQHCYFFAEVFKQLLADFPELNTKENMDYVYRMINRAVELETNWAHYTL-KEVRGID 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LK-KEKNFFETRVTEYQ 117
                 Y++++AN R   +G++  ++  + N  PW+    D  L   + +FFE +   Y 
Sbjct: 273 LNELSDYIKYMANMRLRLLGMDKAYEGVDINSMPWIKPFSDEALNATKTDFFEAKSRNYG 332

Query: 118 QGAE 121
           +  +
Sbjct: 333 KVGD 336


>gi|237738278|ref|ZP_04568759.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           mortiferum ATCC 9817]
 gi|229420158|gb|EEO35205.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           mortiferum ATCC 9817]
          Length = 348

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 9/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I +++ ENP+ + +        M  +A   EI++ +  +    +G+ 
Sbjct: 220 RDELSHVVIFQQMIKEVQNENPNFFDENI---IYEMFEKAVEQEISWTNHIIGGNILGIT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
             + E Y +++AN R   IGL+PL++ Y +NP+  +    D +     + NFFE  VT Y
Sbjct: 277 EKTTESYTKWLANERLKSIGLQPLYEGYEKNPYKHLERFADTEGEGNVKANFFEGTVTSY 336

Query: 117 QQGAELK-WD 125
              + ++ WD
Sbjct: 337 NMSSSVEGWD 346


>gi|282598964|ref|YP_003358881.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Deftia phage phiW-14]
 gi|257219034|gb|ACV50049.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Deftia phage phiW-14]
          Length = 346

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 3/125 (2%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE +H+     +  ++  E+P L T E +++   +       E  +      K  + +
Sbjct: 205 LRDEGIHVEGSSLLYRKVMGEHPWLMTDEHKKQVYDLARAVVAAEDLFLDLAFKKYQLTM 264

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK---NFFETRVTEYQ 117
                + Y++++ NRR  Q+G + +F+    P PW+ E++     K   NFFETRV  YQ
Sbjct: 265 TKDESKAYVRYMMNRRLLQLGHKAIFEVQGIPCPWIEEILGGAGGKRDSNFFETRVDNYQ 324

Query: 118 QGAEL 122
               L
Sbjct: 325 ASGAL 329


>gi|23100542|ref|NP_694009.1| ribonucleotide-diphosphate reductase subunit beta [Oceanobacillus
           iheyensis HTE831]
 gi|22778775|dbj|BAC15043.1| ribonucleoside-diphosphate reductase beta subunit [Oceanobacillus
           iheyensis HTE831]
          Length = 347

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++      ENP     EF         ++  LEI ++H  +     G++
Sbjct: 219 RDELEHGRFITELFRATLEENPSHNNAEFIDWIYDRFQQSVELEIEWSHYVL-NKLEGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDL--KKEKNFFETRVTEYQQ 118
               + Y+++ AN+    +GLE L+  + ENP  W+   +D     + +FFE +  +Y +
Sbjct: 278 MDDMDGYIKYRANKMLRMMGLEELYPQHVENPMKWVRAYVDNFDGTKTDFFEQKSRQYTK 337

Query: 119 GAELK 123
            ++L 
Sbjct: 338 TSDLN 342


>gi|56419447|ref|YP_146765.1| ribonucleoside-diphosphate reductase subunit beta [Geobacillus
           kaustophilus HTA426]
 gi|56379289|dbj|BAD75197.1| ribonucleoside-diphosphate reductase beta subunit [Geobacillus
           kaustophilus HTA426]
          Length = 346

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H++    +  ++  E P   T E     R    +A  LEI +A E +     G++
Sbjct: 218 RDEHIHVDLFAKIFKEVLNEYPEYRTPELADFVRNTFMKAAELEIEWAREIIGNDIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQ 118
               E Y++F AN R HQ+G +  F  Y  NP  W+    ++   + +FFE +  +Y +
Sbjct: 278 LADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGKSDFFEQKPRQYTK 336


>gi|261419130|ref|YP_003252812.1| ribonucleoside-diphosphate reductase [Geobacillus sp. Y412MC61]
 gi|319765947|ref|YP_004131448.1| ribonucleotide reductase [Geobacillus sp. Y412MC52]
 gi|261375587|gb|ACX78330.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. Y412MC61]
 gi|317110813|gb|ADU93305.1| ribonucleotide reductase [Geobacillus sp. Y412MC52]
          Length = 346

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H++    +  ++  E P   T E     R    +A  LEI +A E +     G++
Sbjct: 218 RDEHIHVDLFAKIFKEVLNEYPEYRTPELSDFVRETFTKAAELEIEWAGEIIGNDIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQ 118
               E Y++F AN R HQ+G +  F  Y  NP  W+    ++   + +FFE +  +Y +
Sbjct: 278 LADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGKSDFFEQKPRQYTK 336


>gi|297530897|ref|YP_003672172.1| ribonucleotide reductase [Geobacillus sp. C56-T3]
 gi|297254149|gb|ADI27595.1| ribonucleotide reductase [Geobacillus sp. C56-T3]
          Length = 346

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H++    +  ++  E P   T E     R    +A  LEI +A E +     G++
Sbjct: 218 RDEHIHVDLFAKIFKEVLNEYPEYRTPELSDFVRETFTKAAELEIEWAGEIIGNDIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQ 118
               E Y++F AN R HQ+G +  F  Y  NP  W+    ++   + +FFE +  +Y +
Sbjct: 278 LADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGKSDFFEQKPRQYTK 336


>gi|167462363|ref|ZP_02327452.1| ribonucleoside-diphosphate reductase beta subunit [Paenibacillus
           larvae subsp. larvae BRL-230010]
          Length = 343

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 68/122 (55%), Gaps = 2/122 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H+     +  ++  ENP L  +E  +  R    +A  LEIA++   +   F G+ 
Sbjct: 215 RDEEIHVRLFTQIFRELIAENPELDNEETHEFVRQTFRKAAELEIAWSEYIIGDRFDGVT 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEV-IDLKKEKNFFETRVTEYQQG 119
           +   ++Y++F+AN+R +++G+E  F+ +  N   W+     +   + +FFE+RVT+Y + 
Sbjct: 275 SRDLDKYVRFMANKRVNELGIERPFEGHRRNNLRWIKAYEENDAGKTDFFESRVTQYVKV 334

Query: 120 AE 121
           ++
Sbjct: 335 SD 336


>gi|157325080|ref|YP_001468505.1| gp125 [Listeria phage A511]
 gi|66732769|gb|AAY53360.1| gp57 [Listeria phage P100]
 gi|66733088|gb|AAY52906.1| gp125 [Listeria phage A511]
          Length = 343

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  ENP L T E           A  LE A++ E +  G  G++
Sbjct: 215 RDELAHSKFISELIRAIVGENPELQTDELNDYVYASFRHAVELEQAWSSEVLQ-GIEGID 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                 Y+++ AN+    +GL+P++  +TEN   W+    D   + + +FFE R + Y++
Sbjct: 274 VEEMLDYVKYRANKMLGMLGLQPMYQGHTENSMTWIKAYADNFTETKTDFFEMRNSSYKK 333


>gi|83592781|ref|YP_426533.1| ribonucleotide-diphosphate reductase subunit beta [Rhodospirillum
           rubrum ATCC 11170]
 gi|83575695|gb|ABC22246.1| Ribonucleoside-diphosphate reductase [Rhodospirillum rubrum ATCC
           11170]
          Length = 358

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 14/138 (10%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDESLH    I + ++   E   L TK  +     +      LE  +       G   G
Sbjct: 206 VRDESLHCQGIIRLFHEWNRETGAL-TKPVRDDILDVATTMVGLEEKFVDLAFELGAIEG 264

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKY-----------TENPFPWMSEVIDLKKEKNF 108
           + A   + Y++++A+ R  Q+ L  L+ +             +P PW+ E+++  +  NF
Sbjct: 265 MRAEDIKSYVRYVADWRLTQLKLPILYGHFRETEAGYEQLRPHPLPWLVEILNGVEHANF 324

Query: 109 FETRVTEYQQGA-ELKWD 125
           FE R TEY + A +  WD
Sbjct: 325 FEQRSTEYSKAATQGAWD 342


>gi|109287926|ref|YP_654620.1| hypothetical protein MIV048L [Invertebrate iridescent virus 3]
 gi|123878658|sp|Q197B2|RIR2_IIV3 RecName: Full=Probable ribonucleoside-diphosphate reductase small
           subunit 048L; AltName: Full=Ribonucleotide reductase
           small subunit
 gi|106073549|gb|ABF82078.1| hypothetical protein MIV048L [Aedes taeniorhynchus iridescent
           virus]
          Length = 376

 Score =  120 bits (303), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 2/120 (1%)

Query: 3   DESLHLNFGIDVINQIKIENP-HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60
           DE+ H N  +++ + + +EN  H+     + + R    +   LE  +       G    L
Sbjct: 250 DETHHTNSMMELFSTLVVENKSHIRLGVLEARVRDTARKIVQLEDGFIDLAFSMGEMRQL 309

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A   + Y+++I NRR   +G  PL+   ENP PW+ ++++     NFFE + TEY + +
Sbjct: 310 TADDVKSYIRYITNRRLQTMGYLPLYSVVENPLPWVEDLLNAPSHTNFFENKPTEYAKAS 369


>gi|294501621|ref|YP_003565321.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           megaterium QM B1551]
 gi|295706969|ref|YP_003600044.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           megaterium DSM 319]
 gi|294351558|gb|ADE71887.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           megaterium QM B1551]
 gi|294804628|gb|ADF41694.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           megaterium DSM 319]
          Length = 347

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 4/124 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH+     +  ++  ENP   T+E +        EA  LEI +A   + + F G+ 
Sbjct: 217 RDEQLHVGLFEKIFKEVLNENPAYRTEELETFVVETFQEAARLEIEWAESVIGEKFDGIT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEP-LFKYT--ENPFPWMSEVIDLK-KEKNFFETRVTEYQ 117
               +QY++++AN+RC+Q+G     F     ENP  W+    ++   + +FFE +  +Y 
Sbjct: 277 MKELQQYIEYMANKRCNQLGFGRAAFPEAPIENPLRWIIAYQEVDLGKTDFFEQKSRQYT 336

Query: 118 QGAE 121
           + ++
Sbjct: 337 KASD 340


>gi|237678830|emb|CAQ57557.1| NrdB protein [Bradyrhizobium elkanii]
          Length = 360

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 14/138 (10%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDESLH    I + ++   E     T+  +     +      LE  +       G   G
Sbjct: 212 VRDESLHCEGIIKLFHEWNRETG-AVTRSVRDDIVDVAKTMVKLEENFVDLAFGLGKIEG 270

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----------NPFPWMSEVIDLKKEKNF 108
           +       Y++++A+ R  Q+ + P+F + E           +P PW+ E+++  +  NF
Sbjct: 271 MRPEQIHTYVRYVADWRLTQLRIAPVFGFFEAKEGGFTQLKAHPLPWLVEILNGVEHANF 330

Query: 109 FETRVTEYQQGAE-LKWD 125
           FE R TEY + A    WD
Sbjct: 331 FEQRATEYSKAASRGSWD 348


>gi|229542075|ref|ZP_04431135.1| Ribonucleoside-diphosphate reductase [Bacillus coagulans 36D1]
 gi|229326495|gb|EEN92170.1| Ribonucleoside-diphosphate reductase [Bacillus coagulans 36D1]
          Length = 347

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  +  E+P L T  F         E+  LE  ++   +     G++
Sbjct: 219 RDELEHGRFISELIRAVLSEHPELNTPAFSDWVYARFRESVDLETEWSEYVLQD-VEGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDL--KKEKNFFETRVTEYQQ 118
                 ++++ AN+    IGL  L+ ++ ENP  W+    D     + +FFE +   Y +
Sbjct: 278 LEEMAGFIKYRANKMLRMIGLSELYPEHVENPMKWIRAYADNFDATKTDFFEQKSRSYTK 337

Query: 119 GAELK 123
            ++L 
Sbjct: 338 VSDLN 342


>gi|315304277|ref|ZP_07874626.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           ivanovii FSL F6-596]
 gi|313627356|gb|EFR96140.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           ivanovii FSL F6-596]
          Length = 349

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T E  + +      A  LE  ++ E M  G  G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTDELVEYTHEAFRHAVELETEWSEEVMQ-GIEGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                 Y+++ AN+    +G+  L+  ++EN   W+    D   + + +FFE R + Y++
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSENTMTWIKAYADNFTETKTDFFEMRNSSYKK 339


>gi|313622843|gb|EFR93161.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           innocua FSL J1-023]
          Length = 349

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++ E +  G  G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHDAFRHAVELETEWSEEVLQ-GIEGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                 Y+++ AN+    +G+  L+  +++N   W+    D   + + +FFE R + Y++
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339


>gi|310830452|ref|YP_003965553.1| Ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           polymyxa SC2]
 gi|309249919|gb|ADO59485.1| Ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           polymyxa SC2]
          Length = 342

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 5/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ H  F  ++  Q+ I+ P L T++ +      + EA   E  +A   +  G  G++
Sbjct: 214 RDENQHCYFFAELYKQLLIDFPQLNTEQNKTFVYNFMDEAVRHETEWAEYVL-DGIEGID 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID---LKKEKNFFETRVTEYQQ 118
                 Y++ IAN R   +GL   ++   N  PW+    D        + FE +   Y +
Sbjct: 273 LDEFRGYIRHIANNRLRLMGLPAAYEGVSNTMPWIRPFSDEALNDTLTDQFEAKPRTYTK 332

Query: 119 GAE-LKWD 125
            ++   WD
Sbjct: 333 ASQDNDWD 340


>gi|16801322|ref|NP_471590.1| ribonucleotide-diphosphate reductase subunit beta [Listeria innocua
           Clip11262]
 gi|16414770|emb|CAC97486.1| lin2258 [Listeria innocua Clip11262]
          Length = 349

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++ E +  G  G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHDAFRHAVELETEWSEEVLQ-GIEGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                 Y+++ AN+    +G+  L+  +++N   W+    D   + + +FFE R + Y++
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339


>gi|291461082|ref|ZP_06026838.2| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           periodonticum ATCC 33693]
 gi|291379059|gb|EFE86577.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           periodonticum ATCC 33693]
          Length = 348

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 8/127 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P  ++ E      +M   A   EI +    +    +G+ 
Sbjct: 220 RDELSHVVLFRSIVKEIKNDYPEFFSAET---IYSMFKTAVEQEINWTEHIIGNRVLGIT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
           + + E Y +++AN R   +GLEPL+  + +NP+  +    D +     + NFFE  VT Y
Sbjct: 277 SQTTEAYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 336

Query: 117 QQGAELK 123
              + + 
Sbjct: 337 NMSSSID 343


>gi|270000178|gb|ACZ57936.1| m015L [Myxoma virus]
          Length = 103

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 29/92 (31%), Positives = 55/92 (59%), Gaps = 2/92 (2%)

Query: 31  QQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90
           +++  +++ EA ++E  +  E +P   +G+N     QY++F+A+R   ++G   +F    
Sbjct: 1   EERVASIIKEAVVIEQRFLTEALPVRLIGMNCELMCQYIEFVADRLIAELGYSKIF-SAT 59

Query: 91  NPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122
           NPF +M E I L+ + NFFE RV++YQ+   +
Sbjct: 60  NPFDFM-ENISLEGKTNFFEKRVSDYQRMGVV 90


>gi|317130866|ref|YP_004097148.1| ribonucleotide reductase [Bacillus cellulosilyticus DSM 2522]
 gi|315475814|gb|ADU32417.1| ribonucleotide reductase [Bacillus cellulosilyticus DSM 2522]
          Length = 345

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 63/122 (51%), Gaps = 2/122 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+    ++  ++  E P L +++  +  +    +   LEI +A   +     G++
Sbjct: 217 RDEQHHVYLFANIFKELMHEYPELNSEKTHRFVQETFKKGAELEINWAKYIIGDQMEGID 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
               E Y++F+AN+R +++G+E  F+ Y  NP  W+    D+   + +FFE +  +Y + 
Sbjct: 277 IGDLEAYIKFMANKRVNELGVERPFEGYRNNPMRWIKIYEDVNSGKTDFFEQKSRQYTKV 336

Query: 120 AE 121
           ++
Sbjct: 337 SD 338


>gi|237738722|ref|ZP_04569203.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 2_1_31]
 gi|229423825|gb|EEO38872.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 2_1_31]
          Length = 344

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 8/127 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P  ++ E      +M   A   EI +    +    +G+ 
Sbjct: 216 RDELSHVVLFRSIVKEIKNDYPEFFSAET---IYSMFKTAVEQEINWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
           + + E Y +++AN R   +GLEPL+  + +NP+  +    D +     + NFFE  VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332

Query: 117 QQGAELK 123
              + + 
Sbjct: 333 NMSSSID 339


>gi|46908387|ref|YP_014776.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|47091823|ref|ZP_00229618.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes str. 4b H7858]
 gi|226224761|ref|YP_002758868.1| ribonucleoside-diphosphate reductase, subunit beta [Listeria
           monocytogenes Clip81459]
 gi|254825283|ref|ZP_05230284.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL J1-194]
 gi|254853280|ref|ZP_05242628.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL R2-503]
 gi|254931734|ref|ZP_05265093.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes HPB2262]
 gi|255519998|ref|ZP_05387235.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL J1-175]
 gi|300764038|ref|ZP_07074034.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes FSL N1-017]
 gi|46881658|gb|AAT04953.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|47019834|gb|EAL10572.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes str. 4b H7858]
 gi|225877223|emb|CAS05937.1| Putative ribonucleoside-diphosphate reductase, subunit beta
           [Listeria monocytogenes serotype 4b str. CLIP 80459]
 gi|258606640|gb|EEW19248.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL R2-503]
 gi|293583289|gb|EFF95321.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes HPB2262]
 gi|293594529|gb|EFG02290.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL J1-194]
 gi|300515379|gb|EFK42430.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes FSL N1-017]
 gi|313617790|gb|EFR90013.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           innocua FSL S4-378]
 gi|328465961|gb|EGF37142.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 1816]
 gi|328472177|gb|EGF43048.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 220]
 gi|332312605|gb|EGJ25700.1| Ribonucleoside-diphosphate reductase [Listeria monocytogenes str.
           Scott A]
          Length = 349

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++ E +  G  G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHDAFRHAVELETEWSEEVLQ-GIEGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                 Y+++ AN+    +G+  L+  +++N   W+    D   + + +FFE R + Y++
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339


>gi|149182583|ref|ZP_01861054.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           SG-1]
 gi|148849719|gb|EDL63898.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           SG-1]
          Length = 345

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 2/122 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH+     +  ++  ENP   T E +         A  LEI +  + +     GL 
Sbjct: 217 RDEQLHVGLFEKIYKEVLHENPEYDTAELKVFGTQAFKRAAELEIEWGEQIIGNKIDGLL 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
               E Y++F+AN+R  Q+G +  F+ Y  NP  W+    ++   + +FFE +  +Y + 
Sbjct: 277 MSDLEAYIKFMANKRAEQMGFQAPFEGYRTNPLRWIVAYQEVDLGKTDFFEQKSRQYTKT 336

Query: 120 AE 121
           ++
Sbjct: 337 SD 338


>gi|17567153|ref|NP_508269.1| hypothetical protein F19G12.2 [Caenorhabditis elegans]
 gi|10864352|gb|AAG24065.1| Hypothetical protein F19G12.2 [Caenorhabditis elegans]
          Length = 668

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 32/113 (28%), Positives = 60/113 (53%), Gaps = 8/113 (7%)

Query: 6   LHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSC 65
           LH N      N  +        K  + +   +++E+ L+E  +  E++P   +G+N    
Sbjct: 546 LHPNCFFSTFNLQRRR------KPAESRITEIINESVLVEQDFVRESLPTNLIGMNQHMM 599

Query: 66  EQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
            +Y++F+A+    ++G    +  T+NPF +M E I ++ + NFFE RV+EYQ+
Sbjct: 600 CKYVEFVADLLLEELGYSKRYN-TKNPFDFM-ENISIEGKTNFFEKRVSEYQR 650


>gi|27375117|ref|NP_766646.1| ribonucleotide-diphosphate reductase subunit beta [Bradyrhizobium
           japonicum USDA 110]
 gi|27348253|dbj|BAC45271.1| ribonucleoside-diphosphate reductase beta subunit [Bradyrhizobium
           japonicum USDA 110]
          Length = 360

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 14/138 (10%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
           +RDESLH    I + ++   E     T+  +     +      LE  +       G   G
Sbjct: 212 VRDESLHCEGIIKLFHEWHRETG-AVTRPVRDDIVDVAKTMVKLEENFVELAFGLGKIEG 270

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----------NPFPWMSEVIDLKKEKNF 108
           +       Y++++A+ R  Q+ + P+F + E           +P PW+ E+++  +  NF
Sbjct: 271 MLPEHIHAYVRYVADWRLAQLRIAPVFGFFEAKEGGFTQLKAHPLPWLVEILNGVEHANF 330

Query: 109 FETRVTEYQQGAE-LKWD 125
           FE R TEY + A    WD
Sbjct: 331 FEQRATEYSKAASRGSWD 348


>gi|328722535|ref|XP_001944897.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Acyrthosiphon pisum]
          Length = 345

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 9/113 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K        ++ +A  +E  +    +    VG++
Sbjct: 232 RDEGLHTDFACLLFK-------HLDQKPPLTVITHIICKAVTIEQYFLTNALLVKMVGMS 284

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVT 114
                +Y++F+A+R  +++G   +++ + NPFP+M  ++  + + N FE RV 
Sbjct: 285 CEKMAEYIEFVADRLLNELGCPAVYR-SSNPFPFMD-LLSQQGKTNGFEKRVR 335


>gi|294782021|ref|ZP_06747353.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 1_1_41FAA]
 gi|294481832|gb|EFG29601.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 1_1_41FAA]
          Length = 344

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 8/127 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P  ++ E      +M   A   EI +    +    +G+ 
Sbjct: 216 RDELSHVVLFRSIVKEIKNDYPEFFSAET---IYSMFKTAVEQEINWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
           + + E Y +++AN R   +GLEPL+  + +NP+  +    D +     + NFFE  VT Y
Sbjct: 273 SQTTEVYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332

Query: 117 QQGAELK 123
              + + 
Sbjct: 333 NMSSSID 339


>gi|89097912|ref|ZP_01170799.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           NRRL B-14911]
 gi|89087414|gb|EAR66528.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           NRRL B-14911]
          Length = 353

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH++  + +  +I  E P   TKE  + + +   EA  LEI +A   +     G+ 
Sbjct: 224 RDEQLHVDLFVKIFREILDEYPEQNTKELAEFAESTFREAAYLEIEWARSIIGDKISGIL 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
               E+Y++F AN R +Q+G    F+ +  NP  W+    ++   + +FFE +  +Y + 
Sbjct: 284 IGDVEEYIRFYANVRSNQLGFNRPFEGSRTNPLRWIKAYEEVDLGKSDFFEQKPRQYVKV 343

Query: 120 AELK 123
             + 
Sbjct: 344 NTVD 347


>gi|16804193|ref|NP_465678.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes EGD-e]
 gi|116873587|ref|YP_850368.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           welshimeri serovar 6b str. SLCC5334]
 gi|217963685|ref|YP_002349363.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes HCC23]
 gi|224500181|ref|ZP_03668530.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes Finland 1988]
 gi|224501047|ref|ZP_03669354.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL R2-561]
 gi|254826956|ref|ZP_05231643.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL N3-165]
 gi|254831409|ref|ZP_05236064.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 10403S]
 gi|255028522|ref|ZP_05300473.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes LO28]
 gi|284802601|ref|YP_003414466.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 08-5578]
 gi|284995743|ref|YP_003417511.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 08-5923]
 gi|290893101|ref|ZP_06556089.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL J2-071]
 gi|16411624|emb|CAD00232.1| lmo2154 [Listeria monocytogenes EGD-e]
 gi|116742465|emb|CAK21589.1| ribonucleoside-diphosphate reductase beta chain [Listeria
           welshimeri serovar 6b str. SLCC5334]
 gi|217332955|gb|ACK38749.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes HCC23]
 gi|258599337|gb|EEW12662.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL N3-165]
 gi|284058163|gb|ADB69104.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 08-5578]
 gi|284061210|gb|ADB72149.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 08-5923]
 gi|290557263|gb|EFD90789.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL J2-071]
 gi|307571740|emb|CAR84919.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes L99]
          Length = 349

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++ E +  G  G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWSEEVLQ-GIEGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                 Y+++ AN+    +G+  L+  +++N   W+    D   + + +FFE R + Y++
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339


>gi|47095728|ref|ZP_00233334.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes str. 1/2a F6854]
 gi|254899145|ref|ZP_05259069.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes J0161]
 gi|254912714|ref|ZP_05262726.1| ribonucleoside-diphosphate reductase [Listeria monocytogenes J2818]
 gi|254937041|ref|ZP_05268738.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes F6900]
 gi|47015871|gb|EAL06798.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes str. 1/2a F6854]
 gi|258609644|gb|EEW22252.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes F6900]
 gi|293590709|gb|EFF99043.1| ribonucleoside-diphosphate reductase [Listeria monocytogenes J2818]
          Length = 349

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++ E +  G  G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWSEEVLQ-GIEGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                 Y+++ AN+    +G+  L+  +++N   W+    D   + + +FFE R + Y++
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339


>gi|138894466|ref|YP_001124919.1| ribonucleoside-diphosphate reductase subunit beta [Geobacillus
           thermodenitrificans NG80-2]
 gi|196247935|ref|ZP_03146637.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. G11MC16]
 gi|134265979|gb|ABO66174.1| Ribonucleoside-diphosphate reductase beta subunit [Geobacillus
           thermodenitrificans NG80-2]
 gi|196212719|gb|EDY07476.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. G11MC16]
          Length = 344

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 2/119 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H++    +  ++  E P   T E    +R+   +A  LEI +A E +     G++
Sbjct: 216 RDEHIHVDLFAKIFKEVLNEYPEYRTPELADFARSTFMKAAELEIEWAGEIIGNDIDGID 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQ 118
               E Y++F AN R HQ+G +  F  Y  NP  W+    ++   + +FFE +  +Y +
Sbjct: 276 LADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGKSDFFEQKPRQYTK 334


>gi|315283233|ref|ZP_07871471.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           marthii FSL S4-120]
 gi|313613124|gb|EFR87028.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           marthii FSL S4-120]
          Length = 349

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T E  + +      A  LE  ++ E +  G  G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTDELVEYTHEAFRHAVELETEWSEEVLQ-GIEGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                 Y+++ AN+    +G+  L+  +++N   W+    D   + + +FFE R + Y++
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339


>gi|255023762|ref|ZP_05295748.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL J1-208]
          Length = 284

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T E  + +      A  LE  ++ E +  G  G++
Sbjct: 156 RDELAHSKFISEVIRAILGENPELQTDELVEYTHDAFRHAVELETEWSEEVLQ-GIEGID 214

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                 Y+++ AN+    +G+  L+  +++N   W+    D   + + +FFE R + Y++
Sbjct: 215 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 274


>gi|255018022|ref|ZP_05290148.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL F2-515]
          Length = 267

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++ E +  G  G++
Sbjct: 139 RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWSEEVLQ-GIEGID 197

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                 Y+++ AN+    +G+  L+  +++N   W+    D   + + +FFE R + Y++
Sbjct: 198 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 257


>gi|256027986|ref|ZP_05441820.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp.
           D11]
          Length = 348

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 8/127 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EIA+    +    +G+ 
Sbjct: 220 RDELSHVVLFRSIVKEIKNDFPNFFSAET---VYSMFKTAVEQEIAWTEHIIGNRVLGIT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
           + + E Y +++AN R   +GLEPLF  + +NP+  +    D +     + NFFE  VT Y
Sbjct: 277 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 336

Query: 117 QQGAELK 123
              + + 
Sbjct: 337 NMSSSID 343


>gi|254303614|ref|ZP_04970972.1| ribonucleoside-diphosphate reductase [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
 gi|148323806|gb|EDK89056.1| ribonucleoside-diphosphate reductase [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
          Length = 344

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 8/127 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EIA+    +    +G+ 
Sbjct: 216 RDELSHVVLFRSMVKEIKNDFPNFFSAET---IYSMFKTAVEQEIAWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
           + + E Y +++AN R   +GLEPLF  + +NP+  +    D +     + NFFE  VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332

Query: 117 QQGAELK 123
              + + 
Sbjct: 333 NMSSSID 339


>gi|84998662|ref|XP_954052.1| ribonucleotide reductase R2 subunit or ribonucleoside-diphosphate
           reductase small chain [Theileria annulata]
 gi|65305050|emb|CAI73375.1| ribonucleotide reductase R2 subunit or ribonucleoside-diphosphate
           reductase small chain, putative [Theileria annulata]
          Length = 322

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 61/104 (58%), Gaps = 9/104 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +FG  + + +K + P        +  + ++ EA ++E +Y  +++P   +G+N
Sbjct: 224 RDEGLHADFGCFIYHNLKHKLPE-------EAVQQIIKEAVVVERSYICDSLPCDLIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE 105
           +    QY++F+A+R    +G+ P++  T NPF WM ++I ++ +
Sbjct: 277 SQLMTQYIEFVADRLLQSLGVRPVYNVT-NPFDWM-QLISVQVK 318


>gi|87311395|ref|ZP_01093515.1| ribonucleotide-diphosphate reductase beta subunit [Blastopirellula
           marina DSM 3645]
 gi|87285807|gb|EAQ77721.1| ribonucleotide-diphosphate reductase beta subunit [Blastopirellula
           marina DSM 3645]
          Length = 313

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/84 (48%), Positives = 57/84 (67%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP LWT EFQ +   ++ +A  LEI YA + +P G +GL
Sbjct: 229 LRDETVHLNFGIDLINGIKAENPDLWTAEFQAEIIDLIKQAVELEIEYAGDCLPNGILGL 288

Query: 61  NAPSCEQYMQFIANRRCHQIGLEP 84
           N      Y+ ++A+RR  +IGL  
Sbjct: 289 NRDLFRDYVHYVADRRVERIGLPK 312


>gi|289435502|ref|YP_003465374.1| ribonucleoside-diphosphate reductase beta chain [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
 gi|289171746|emb|CBH28292.1| ribonucleoside-diphosphate reductase beta chain [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
 gi|313632343|gb|EFR99385.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           seeligeri FSL N1-067]
 gi|313636848|gb|EFS02469.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           seeligeri FSL S4-171]
          Length = 349

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++ E +  G  G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVDLETEWSEEVLQ-GIEGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                 Y+++ AN+    +G+  L+  +++N   W+    D   + + +FFE R + Y++
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339


>gi|315644971|ref|ZP_07898099.1| Ribonucleoside-diphosphate reductase [Paenibacillus vortex V453]
 gi|315279682|gb|EFU42984.1| Ribonucleoside-diphosphate reductase [Paenibacillus vortex V453]
          Length = 343

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 5/124 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ H  F  +V  Q+  + P L ++E        +  A  LE  +AH T+     G++
Sbjct: 214 RDENQHCYFFAEVFKQLLKDFPELNSQENIDYLYRTIDRAVELETNWAHYTLSN-VRGID 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LK-KEKNFFETRVTEYQ 117
                 Y+++IANRR   +GLE  ++  + N  PW+    D  L   + +FFE +   Y 
Sbjct: 273 LNELGDYIKYIANRRITMMGLEKAYQGVDVNCMPWIKPFSDEALNATKTDFFEAKSRNYG 332

Query: 118 QGAE 121
           +  +
Sbjct: 333 KVGD 336


>gi|156564205|ref|YP_001429715.1| nrd beta subunit [Bacillus phage 0305phi8-36]
 gi|154622902|gb|ABS83782.1| nrd beta subunit [Bacillus phage 0305phi8-36]
          Length = 352

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 4/122 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F   +I ++  ENP L T+E  Q     L EA   E  +A E +     GL+
Sbjct: 224 RDEMQHAYFIGLLIRRLLTENPELNTQENAQYIVDSLKEAVATEKEWAGEIL-ADIEGLD 282

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK---EKNFFETRVTEYQQ 118
               + Y++++AN+R  Q+G++ +++   NP PW+    D      + + FE +  +Y  
Sbjct: 283 LEEFDHYIEYLANKRVRQLGMDNIYEERGNPMPWIQVFSDEMMEHTKTDQFENKSRDYSG 342

Query: 119 GA 120
             
Sbjct: 343 AT 344


>gi|289765931|ref|ZP_06525309.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. D11]
 gi|289717486|gb|EFD81498.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. D11]
          Length = 344

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 8/127 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EIA+    +    +G+ 
Sbjct: 216 RDELSHVVLFRSIVKEIKNDFPNFFSAET---VYSMFKTAVEQEIAWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
           + + E Y +++AN R   +GLEPLF  + +NP+  +    D +     + NFFE  VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332

Query: 117 QQGAELK 123
              + + 
Sbjct: 333 NMSSSID 339


>gi|260497963|ref|ZP_05816079.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_33]
 gi|260196471|gb|EEW94002.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_33]
          Length = 344

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 8/127 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EIA+    +    +G+ 
Sbjct: 216 RDELSHVVLFRSIVKEIKNDFPNFFSAET---VYSMFKTAVEQEIAWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
           + + E Y +++AN R   +GLEPLF  + +NP+  +    D +     + NFFE  VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332

Query: 117 QQGAELK 123
              + + 
Sbjct: 333 NMSSSID 339


>gi|239502693|ref|ZP_04662003.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB900]
          Length = 309

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 6/126 (4%)

Query: 2   RDE-SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE   HL+    +++ ++ EN  ++T+ F  K+  +   ++ +EI++      KG    
Sbjct: 187 RDEEGTHLDLFAHMLDTLRHENKDVFTQSFWNKALEVFLTSSEMEISWGKYIT-KGVT-- 243

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPL-FKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQ 118
           N  + E Y++ +AN R  QI    + +   +NPFPW+ +       EKNFFETRVT+Y+ 
Sbjct: 244 NPKAIEDYIKHLANLRAEQIQAPFVPYPGVKNPFPWVEQFSKPNTSEKNFFETRVTDYKV 303

Query: 119 GAELKW 124
           G  L W
Sbjct: 304 GGALVW 309


>gi|299822182|ref|ZP_07054068.1| ribonucleotide-diphosphate reductase subunit beta [Listeria grayi
           DSM 20601]
 gi|299815711|gb|EFI82949.1| ribonucleotide-diphosphate reductase subunit beta [Listeria grayi
           DSM 20601]
          Length = 349

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T E    +      A  LE  ++ E M +G  G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTDELVAYTHDAFRHAVELETIWSEEVM-EGIEGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                 Y+++ AN+    +G+  L+  ++EN   W+    D   + + +FFE R + Y++
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSENTMTWIKAYADNFTETKTDFFEMRNSSYKK 339


>gi|237742881|ref|ZP_04573362.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 4_1_13]
 gi|229430529|gb|EEO40741.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 4_1_13]
          Length = 344

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 8/127 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EI +    +    +G+ 
Sbjct: 216 RDELSHVVLFRSMVKEIKNDFPNFFSAET---IYSMFKTAVEQEITWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
           + + E Y +++AN R   +GLEPL+  + +NP+  +    D +     + NFFE  VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332

Query: 117 QQGAELK 123
              + + 
Sbjct: 333 NMSSSID 339


>gi|218249013|ref|YP_002374384.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8801]
 gi|218169491|gb|ACK68228.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8801]
          Length = 344

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I + +   PH        +   M   A   E  + +  +    +G+ 
Sbjct: 216 RDELSHVRLYQKLIPEARKVFPH-----SVDQIYDMFDRAVKYECQWTNHIVGNNILGIT 270

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK----EKNFFETRVT 114
             S EQY +++AN R   IGL+PL+    Y ++P+  +    D KK    + NFFE  VT
Sbjct: 271 EASTEQYTKYLANIRLRSIGLDPLYPDIKYNKSPYTHLERFSDTKKEAHTKANFFEATVT 330

Query: 115 EYQQGAELK-WD 125
            Y   + +  WD
Sbjct: 331 SYVMSSGITGWD 342


>gi|257062099|ref|YP_003139987.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8802]
 gi|256592265|gb|ACV03152.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8802]
          Length = 355

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I + +   PH        +   M   A   E  + +  +    +G+ 
Sbjct: 227 RDELSHVRLYQKLIPEARKVFPH-----SVDQIYDMFDRAVKYECQWTNHIVGNNILGIT 281

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK----EKNFFETRVT 114
             S EQY +++AN R   IGL+PL+    Y ++P+  +    D KK    + NFFE  VT
Sbjct: 282 EASTEQYTKYLANIRLRSIGLDPLYPDIKYNKSPYTHLERFSDTKKEAHTKANFFEATVT 341

Query: 115 EYQQGAELK-WD 125
            Y   + +  WD
Sbjct: 342 SYVMSSGITGWD 353


>gi|254523600|ref|ZP_05135655.1| ribonucleoside-diphosphate reductase, beta subunit
           [Stenotrophomonas sp. SKA14]
 gi|219721191|gb|EED39716.1| ribonucleoside-diphosphate reductase, beta subunit
           [Stenotrophomonas sp. SKA14]
          Length = 346

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  ENP L T E           A  LE  ++ E +  G  G++
Sbjct: 218 RDELAHTKFISELIRAIIGENPELQTNELTAYVHQAFEHAIELETQWSSEVL-DGIDGID 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L+   T+N  PW+    D   + + +FFE R   Y++
Sbjct: 277 VEEMTRYVKYRANKMAGMLGIERLYSDTTDNVMPWIKAYADNFTETKTDFFEMRNASYKK 336


>gi|209972895|ref|YP_002300342.1| gp4 [Bacillus phage SPO1]
 gi|209871215|gb|ACI90971.1| gp4 [Bacillus phage SPO1]
          Length = 346

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F   V+  +  E P L T+E       M+ EA  LEI Y+ + +     GL+
Sbjct: 218 RDEVAHAYFFSQVLRYLMAERPELHTEENVNFIYDMMQEAADLEIEYSQKIL-HDIPGLD 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM---SEVIDLKKEKNFFETRVTEYQQ 118
               E Y++ + NRR   +GL+ ++   EN  PWM    +  + + + + FE +   Y++
Sbjct: 277 LEELEGYIKSLCNRRLRGVGLDDIYAGVENSMPWMIAFDDGSNNQTKSDMFEQKSRNYKK 336


>gi|19703451|ref|NP_603013.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|19713529|gb|AAL94312.1| Ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 348

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 8/127 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EI +    +    +G+ 
Sbjct: 220 RDELSHVVLFRSMVKEIKNDFPNFFSAET---IYSMFKTAVEQEITWTEHIIGNRVLGIT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
           + + E Y +++AN R   +GLEPLF  + +NP+  +    D +     + NFFE  VT Y
Sbjct: 277 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 336

Query: 117 QQGAELK 123
              + + 
Sbjct: 337 NMSSSID 343


>gi|256846215|ref|ZP_05551673.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_36A2]
 gi|256719774|gb|EEU33329.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_36A2]
          Length = 344

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 8/127 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EI +    +    +G+ 
Sbjct: 216 RDELSHVVLFRSMVKEIKNDFPNFFSAET---IYSMFKTAVEQEITWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
           + + E Y +++AN R   +GLEPLF  + +NP+  +    D +     + NFFE  VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332

Query: 117 QQGAELK 123
              + + 
Sbjct: 333 NMSSSID 339


>gi|296329016|ref|ZP_06871523.1| ribonucleotide-diphosphate reductase beta subunit [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
 gi|296153909|gb|EFG94720.1| ribonucleotide-diphosphate reductase beta subunit [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
          Length = 348

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 8/127 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EI +    +    +G+ 
Sbjct: 220 RDELSHVVLFRSMVKEIKNDFPNFFSAET---IYSMFKTAVEQEITWTEHIIGNRVLGIT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
           + + E Y +++AN R   +GLEPLF  + +NP+  +    D +     + NFFE  VT Y
Sbjct: 277 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 336

Query: 117 QQGAELK 123
              + + 
Sbjct: 337 NMSSSID 343


>gi|294784669|ref|ZP_06749957.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_27]
 gi|294486383|gb|EFG33745.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_27]
          Length = 344

 Score =  117 bits (293), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 8/127 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EI +    +    +G+ 
Sbjct: 216 RDELSHVVLFRSMVKEIKNDFPNFFSAET---IYSMFKTAVEQEITWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
           + + E Y +++AN R   +GLEPLF  + +NP+  +    D +     + NFFE  VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332

Query: 117 QQGAELK 123
              + + 
Sbjct: 333 NMSSSID 339


>gi|237743586|ref|ZP_04574067.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 7_1]
 gi|229432617|gb|EEO42829.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 7_1]
          Length = 344

 Score =  117 bits (293), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 8/127 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EI +    +    +G+ 
Sbjct: 216 RDELSHVVLFRSMVKEIKNDFPNFFSAET---IYSMFKTAVEQEITWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
           + + E Y +++AN R   +GLEPLF  + +NP+  +    D +     + NFFE  VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332

Query: 117 QQGAELK 123
              + + 
Sbjct: 333 NMSSSID 339


>gi|319785673|ref|YP_004145148.1| ribonucleotide reductase [Pseudoxanthomonas suwonensis 11-1]
 gi|317464185|gb|ADV25917.1| ribonucleotide reductase [Pseudoxanthomonas suwonensis 11-1]
          Length = 354

 Score =  117 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 4/123 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T E           A  LE  +  E +  G  G++
Sbjct: 226 RDELAHTKFISEVIRAIVGENPELQTDELADYVHLAFRHAIELETQWTGEVL-DGIDGID 284

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L+ + T+N  PW+    D   + + +FFE R   Y++
Sbjct: 285 VDEMIRYVKYRANKMAGMLGIESLYTETTDNVMPWIRAYADNFTETKTDFFEMRNASYKK 344

Query: 119 GAE 121
              
Sbjct: 345 TNA 347


>gi|325294459|ref|YP_004280973.1| ribonucleotide reductase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325064907|gb|ADY72914.1| ribonucleotide reductase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 352

 Score =  117 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 7/129 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+      +  +  E    +    + K   M   A   E  ++ + +    +G+N
Sbjct: 224 RDELTHVILFEHFMKDLTDEEFKKYLP--KDKIYEMFKVAVNQEQRFSKKVIGNKILGMN 281

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK----EKNFFETRVTEYQ 117
             S E+Y  ++AN+R   +GL+P+F  T NP+  +  + D       + NFFE  VT Y 
Sbjct: 282 EKSIEEYTYYVANKRLKALGLDPIFPDTPNPYEHLERIADTGGEGNVKANFFEATVTSYN 341

Query: 118 QGAELK-WD 125
           Q + ++ WD
Sbjct: 342 QASAVEGWD 350


>gi|207345015|gb|EDZ71971.1| YGR180Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 224

 Score =  117 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RD   + +F   +         HL TK   +    ++ EA  +E  Y   ++P    G++
Sbjct: 97  RDRGAYTDFSCLLF-------AHLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMD 149

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S   Y++F+A+      G E  +    NPF +M +V     +  FFE +V++YQ+ ++
Sbjct: 150 LKSIHTYIEFVADGLLQGFGNEKYYNAV-NPFEFMEDVATA-GKTTFFEKKVSDYQKASD 207

Query: 122 LK 123
           + 
Sbjct: 208 MS 209


>gi|241589542|ref|YP_002979567.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D]
 gi|240868254|gb|ACS65913.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D]
          Length = 328

 Score =  117 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 45/79 (56%), Positives = 58/79 (73%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 233 LRDESLHCNFGIDLINQIKLENPHLWTAEFKVEITELFKQAVDLEYRYAEDTMPRGVLGL 292

Query: 61  NAPSCEQYMQFIANRRCHQ 79
           NA   + Y++FI NRRC  
Sbjct: 293 NASMFKGYLRFICNRRCRS 311


>gi|67921622|ref|ZP_00515140.1| Ribonucleoside-diphosphate reductase [Crocosphaera watsonii WH
           8501]
 gi|67856734|gb|EAM51975.1| Ribonucleoside-diphosphate reductase [Crocosphaera watsonii WH
           8501]
          Length = 321

 Score =  117 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I + +   PH       ++   M   A   E  + +  +    +G+ 
Sbjct: 193 RDELSHVRLYQKLIPEARKVFPH-----SVEQIYEMFDMAVNYECRWTNHIVGNNILGIT 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK----EKNFFETRVT 114
             S E+Y +++AN R   IGLEPL+    Y+++P+  +    D KK    + NFFE  VT
Sbjct: 248 ESSTEKYTKYLANIRLRSIGLEPLYPEPKYSKSPYTHLERFSDTKKAAHTKANFFEATVT 307

Query: 115 EYQQGAELK-WD 125
            Y   + L  WD
Sbjct: 308 SYVMSSGLTGWD 319


>gi|297582631|ref|YP_003698411.1| ribonucleoside-diphosphate reductase [Bacillus selenitireducens
           MLS10]
 gi|297141088|gb|ADH97845.1| Ribonucleoside-diphosphate reductase [Bacillus selenitireducens
           MLS10]
          Length = 347

 Score =  116 bits (292), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 4/123 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F    +  +  ++P L T+E  Q     +  A  LE  +A   +     G++
Sbjct: 219 RDEMQHAYFMSQFVRILLTDHPELNTRENVQYVYDAMASAAGLEQEWAAVIL-ADIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL---KKEKNFFETRVTEYQQ 118
                 Y++++ N+R  Q+GL  LF   +NP PW+    D    + + +FFE +   Y +
Sbjct: 278 LGEFNGYVEYLVNKRLRQLGLSNLFPERDNPMPWIHVFSDTMMNQTKSDFFEQKSRSYTK 337

Query: 119 GAE 121
              
Sbjct: 338 VTS 340


>gi|269861752|ref|XP_002650564.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220065950|gb|EED43491.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 106

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 2/86 (2%)

Query: 34  SRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF 93
              ++ EA  +E  +  E++P   +G+N     QY++F+A+R    +G + ++  + NPF
Sbjct: 7   IEDIVREAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPF 65

Query: 94  PWMSEVIDLKKEKNFFETRVTEYQQG 119
            +M E I L+ + NFFE R   YQ+G
Sbjct: 66  DFM-ENISLQGKTNFFERREANYQKG 90


>gi|323337480|gb|EGA78728.1| Rnr4p [Saccharomyces cerevisiae Vin13]
          Length = 328

 Score =  115 bits (290), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RD   + +F   +         HL TK   +    ++ EA  +E  Y   ++P    G++
Sbjct: 201 RDRGAYTDFSCLLF-------AHLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMD 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S   Y++F+A+      G E  +    NPF +M +V     +  FFE +V++YQ+ ++
Sbjct: 254 LKSIHTYIEFVADGLLQGFGNEKYYNAV-NPFEFMEDVATA-GKTTFFEKKVSDYQKASD 311

Query: 122 LK 123
           + 
Sbjct: 312 MS 313


>gi|194366071|ref|YP_002028681.1| ribonucleotide-diphosphate reductase subunit beta [Stenotrophomonas
           maltophilia R551-3]
 gi|194348875|gb|ACF51998.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
           R551-3]
          Length = 346

 Score =  115 bits (290), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 4/123 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  ENP L T E           A  LE  ++ E +  G  G++
Sbjct: 218 RDELAHTKFISELIRAIIGENPELQTNELTAYVHQSFEHAIELETQWSSEVL-DGIDGID 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L+   T+N  PW+    D   + + +FFE R   Y++
Sbjct: 277 VDEMVRYVKYRANKMAGMLGIERLYSDTTDNVMPWIKAYADNFTETKTDFFEMRNASYKK 336

Query: 119 GAE 121
              
Sbjct: 337 TNA 339


>gi|285016983|ref|YP_003374694.1| ribonucleotide-diphosphate reductase beta subunit protein
           [Xanthomonas albilineans GPE PC73]
 gi|283472201|emb|CBA14708.1| probable ribonucleotide-diphosphate reductase beta subunit protein
           [Xanthomonas albilineans]
          Length = 346

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  EN  L T E           A  LE  ++ E +  G  G++
Sbjct: 218 RDELAHTKFISELIRAIIGENAELQTNELTDYVHQAFEHAIRLETEWSSEVL-DGIEGID 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                QY+++ AN+    +G+E L+   ++N  PW+    D   + + +FFE R   Y++
Sbjct: 277 VDEMIQYVKYRANKMSGMLGIEKLYTGASDNVMPWIKAYADNFTETKTDFFEMRNASYKK 336


>gi|190574752|ref|YP_001972597.1| ribonucleotide-diphosphate reductase subunit beta [Stenotrophomonas
           maltophilia K279a]
 gi|190012674|emb|CAQ46302.1| putative ribonucleoside-diphosphate reductase beta chain
           [Stenotrophomonas maltophilia K279a]
          Length = 346

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  ENP L T E           A  LE  ++ E +  G  G++
Sbjct: 218 RDELAHTKFISELIRAIIGENPELQTNELTAYVHQSFEHAIELETQWSSEVL-DGIDGID 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L+   T+N  PW+    D   + + +FFE R   Y++
Sbjct: 277 VDEMVRYVKYRANKMAGMLGIERLYSDTTDNVMPWIKAYADNFTETKTDFFEMRNASYKK 336


>gi|159030376|emb|CAO91271.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 355

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I +     PH       ++   M   A   E  + +  +    +G+ 
Sbjct: 227 RDELSHVRLYQKLIPEAMAIFPH-----SVEQIYEMFDSAVKHECCWTNHIVGNDILGIT 281

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK----EKNFFETRVT 114
             S EQY +++AN R   IGLEPL+   KY ++P+  +    D KK    + NFFE  VT
Sbjct: 282 EYSTEQYTKYLANIRLKAIGLEPLYREEKYNKSPYNHLERFSDTKKEGHTKANFFEATVT 341

Query: 115 EYQQGAELK-WD 125
            Y   + L  WD
Sbjct: 342 SYVMSSGLTGWD 353


>gi|284929768|ref|YP_003422290.1| ribonucleotide reductase, subunit beta [cyanobacterium UCYN-A]
 gi|284810212|gb|ADB95909.1| ribonucleotide reductase, beta subunit [cyanobacterium UCYN-A]
          Length = 354

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I + +   PH       ++   M   A   E  + +  +    +G+ 
Sbjct: 226 RDELSHVRLYQKLIPEARKVFPH-----STEQIYEMFDTAVNHECRWTNHIVGSNILGIT 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK----EKNFFETRVT 114
             S EQY +++AN R   IGLEPL+   ++T++P+  +    D KK    + NFFE+ VT
Sbjct: 281 ESSTEQYTKYLANIRLRSIGLEPLYTGEEFTKSPYSHLERFSDTKKDGHTKANFFESTVT 340

Query: 115 EYQQGAELK-WD 125
            Y   + +  WD
Sbjct: 341 SYVMSSGVSGWD 352


>gi|313607545|gb|EFR83848.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes FSL F2-208]
          Length = 187

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++ E +  G  G++
Sbjct: 59  RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWSEEVLQ-GIEGID 117

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                 Y+++ AN+    +G+  L+  +++N   W+    D   + + +FFE R + Y++
Sbjct: 118 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 177


>gi|51830370|gb|AAU09736.1| YGR180C [Saccharomyces cerevisiae]
          Length = 345

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RD   + +F   +         HL TK   +    ++ EA  +E  Y   ++P    G++
Sbjct: 218 RDRGAYTDFSCLLF-------AHLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMD 270

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S   Y++F+A+      G E  +    NPF +M +V     +  FFE +V++YQ+ ++
Sbjct: 271 LKSIHTYIEFVADGLLQGFGNEKYYNAV-NPFEFMEDVATA-GKTTFFEKKVSDYQKASD 328

Query: 122 LK 123
           + 
Sbjct: 329 MS 330


>gi|151943458|gb|EDN61769.1| ribonucleotide reductase [Saccharomyces cerevisiae YJM789]
 gi|190406805|gb|EDV10072.1| ribonucleotide reductase [Saccharomyces cerevisiae RM11-1a]
 gi|256270921|gb|EEU06048.1| Rnr4p [Saccharomyces cerevisiae JAY291]
 gi|259146684|emb|CAY79941.1| Rnr4p [Saccharomyces cerevisiae EC1118]
 gi|323333575|gb|EGA74969.1| Rnr4p [Saccharomyces cerevisiae AWRI796]
 gi|323348450|gb|EGA82695.1| Rnr4p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 345

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RD   + +F   +         HL TK   +    ++ EA  +E  Y   ++P    G++
Sbjct: 218 RDRGAYTDFSCLLF-------AHLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMD 270

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S   Y++F+A+      G E  +    NPF +M +V     +  FFE +V++YQ+ ++
Sbjct: 271 LKSIHTYIEFVADGLLQGFGNEKYYNAV-NPFEFMEDVATA-GKTTFFEKKVSDYQKASD 328

Query: 122 LK 123
           + 
Sbjct: 329 MS 330


>gi|6321619|ref|NP_011696.1| Rnr4p [Saccharomyces cerevisiae S288c]
 gi|1710402|sp|P49723|RIR4_YEAST RecName: Full=Ribonucleoside-diphosphate reductase small chain 2;
           AltName: Full=Ribonucleotide reductase R2 subunit 2;
           AltName: Full=Ribonucleotide reductase small subunit 2
 gi|15826570|pdb|1JK0|B Chain B, Ribonucleotide Reductase Y2y4 Heterodimer
 gi|52695527|pdb|1SMS|A Chain A, Structure Of The Ribonucleotide Reductase Rnr4 Homodimer
           From Saccharomyces Cerevisiae
 gi|52695528|pdb|1SMS|B Chain B, Structure Of The Ribonucleotide Reductase Rnr4 Homodimer
           From Saccharomyces Cerevisiae
 gi|915546|gb|AAB72236.1| Rnr4p [Saccharomyces cerevisiae]
 gi|1323319|emb|CAA97206.1| RNR4 [Saccharomyces cerevisiae]
 gi|285812375|tpg|DAA08275.1| TPA: Rnr4p [Saccharomyces cerevisiae S288c]
 gi|323304781|gb|EGA58540.1| Rnr4p [Saccharomyces cerevisiae FostersB]
 gi|323308943|gb|EGA62174.1| Rnr4p [Saccharomyces cerevisiae FostersO]
          Length = 345

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RD   + +F   +         HL TK   +    ++ EA  +E  Y   ++P    G++
Sbjct: 218 RDRGAYTDFSCLLF-------AHLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMD 270

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S   Y++F+A+      G E  +    NPF +M +V     +  FFE +V++YQ+ ++
Sbjct: 271 LKSIHTYIEFVADGLLQGFGNEKYYNAV-NPFEFMEDVATA-GKTTFFEKKVSDYQKASD 328

Query: 122 LK 123
           + 
Sbjct: 329 MS 330


>gi|115691069|ref|XP_001203692.1| PREDICTED: similar to ribonuleotide reductase small subunit,
           partial [Strongylocentrotus purpuratus]
 gi|115735426|ref|XP_798682.2| PREDICTED: similar to ribonuleotide reductase small subunit,
           partial [Strongylocentrotus purpuratus]
          Length = 258

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 31/122 (25%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL       + + ++ +A  LE  Y  E +P   +G+N
Sbjct: 165 RDEGLHCDFACLLFS-------HLNHPTPVSRIQEIIRDAVRLEEEYLSEALPVALIGMN 217

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY+QF+A+R   ++                        + NFFE RV EYQ+   
Sbjct: 218 ARLMCQYIQFVADRLLMEL------------------------KSNFFEKRVGEYQKMNV 253

Query: 122 LK 123
           + 
Sbjct: 254 MT 255


>gi|126654703|ref|ZP_01726237.1| hypothetical protein CY0110_09717 [Cyanothece sp. CCY0110]
 gi|126623438|gb|EAZ94142.1| hypothetical protein CY0110_09717 [Cyanothece sp. CCY0110]
          Length = 352

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I + +   PH       ++   M   A   E  + +  +    +G+ 
Sbjct: 224 RDELSHVRLYQKLIPEARKVFPH-----SVEQIYEMFDMAVNYECRWTNHIVGNNILGIT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK----EKNFFETRVT 114
             S E+Y +++AN R   IGLEPL+    Y ++P+  +    D KK    + NFFE  VT
Sbjct: 279 ESSTEKYTKYLANIRLRSIGLEPLYPEPKYNKSPYTHLERFSDTKKEAHTKANFFEATVT 338

Query: 115 EYQQGAELK-WD 125
            Y   + +  WD
Sbjct: 339 SYVMSSGVTGWD 350


>gi|56692684|ref|YP_164142.1| ribonucleoside-diphosphate reductase beta subunit [Singapore
           grouper iridovirus]
 gi|42517396|gb|AAS18062.1| ribonucleoside-diphosphate reductase beta subunit [Singapore
           grouper iridovirus]
          Length = 384

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 5/129 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP--KGFV 58
           +RDE++H+     +   +  E P L T++  +  +     A  LE A+            
Sbjct: 253 VRDENIHVEGVSRLFETLCAEYPWLMTEKLVRDCKKDAERAAELEFAFIDLAFSYCPALD 312

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEKNFFETRVTEY 116
           GL   S + Y+ ++ N R   +GL  L      ENP PW+  +I+     NFFE  VTEY
Sbjct: 313 GLTPSSVKNYVLYVINLRASHMGLPKLMASAPSENPLPWVKWLIEGADLTNFFENHVTEY 372

Query: 117 QQGA-ELKW 124
           + G     W
Sbjct: 373 ETGGLTGSW 381


>gi|218442220|ref|YP_002380549.1| ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 7424]
 gi|218174948|gb|ACK73681.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 7424]
          Length = 355

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I +     PH       ++   M   A   E  + +  +    +G+ 
Sbjct: 227 RDELSHVRLYQRIIVEAMETFPH-----SVEQIYEMFDTAVQHECRWTNHIVGDNILGIT 281

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK----EKNFFETRVT 114
             S EQY +++AN R + IGL+PL++   Y ++P+  +    D KK    + NFFE  VT
Sbjct: 282 ESSTEQYTKYLANHRLNTIGLKPLYEDEKYKKSPYSHLERFSDTKKDAHTKANFFEATVT 341

Query: 115 EYQQGAELK-WD 125
            Y   + +  WD
Sbjct: 342 SYVMSSGVTGWD 353


>gi|56418235|gb|AAV91049.1| ribonucleotide reductase beta subunit [Grouper iridovirus]
          Length = 384

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 5/129 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP--KGFV 58
           +RDE++H+     +   +  E P L T++  +  +     A  LE A+            
Sbjct: 253 VRDENIHVEGVSRLFETLCAEYPWLMTEKLVRDCKKDAERAAELEFAFIDLAFSYCPALD 312

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEKNFFETRVTEY 116
           GL   S + Y+ ++ N R   +GL  L      ENP PW+  +I+     NFFE  VTEY
Sbjct: 313 GLTPSSVKNYVLYVINLRASHMGLPKLMASAPSENPLPWVKWLIEGADLTNFFENHVTEY 372

Query: 117 QQGA-ELKW 124
           + G     W
Sbjct: 373 ETGGLTGSW 381


>gi|257462865|ref|ZP_05627271.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp.
           D12]
          Length = 348

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 9/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I +IK EN + +    +++ R M   A   EI +    +    +G+ 
Sbjct: 220 RDELSHVVLFQKIIREIKAENHNFF---EEEEIRAMFRTAVEQEILWTEHIIGNRILGIT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK----EKNFFETRVTEY 116
             + E Y +++AN R   IGL P+++  T+NP+  +    D +     + NFFE  VT Y
Sbjct: 277 TETTEAYTKWLANERLRTIGLAPMYEEFTKNPYKHLERFADTEGDGNVKSNFFEGTVTSY 336

Query: 117 QQGAELK-WD 125
              + +  WD
Sbjct: 337 NMSSSIDGWD 346


>gi|239993885|ref|ZP_04714409.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas
           macleodii ATCC 27126]
          Length = 376

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 5/105 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL+    ++N      ++P +    +E ++++R +   A   E  +A      G 
Sbjct: 237 RDENLHLSSTQHILNLWAKGKDDPEMAQIAEECKEEARAIFMNAVEQEKQWADYLFQNGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101
            +GLN     QY+++IAN+R   IGL+  F+ + NP PWM+  ++
Sbjct: 297 MIGLNKEILCQYVEYIANQRMSAIGLDTPFEISSNPLPWMNNYLN 341


>gi|172036555|ref|YP_001803056.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp.
           ATCC 51142]
 gi|171698009|gb|ACB50990.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp.
           ATCC 51142]
          Length = 352

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I + +   PH       ++   M   A   E  + +  +    +G+ 
Sbjct: 224 RDELSHVRLYQKLIPEARKVFPH-----SVEQIYEMFDMAVNYECRWTNHIVGNNILGIT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK----EKNFFETRVT 114
             S E+Y +++AN R   IGLEPL+    Y ++P+  +    D KK    + NFFE  VT
Sbjct: 279 ESSTEKYTKYLANIRLRSIGLEPLYPEPKYNKSPYTHLERFSDTKKEAHTKANFFEATVT 338

Query: 115 EYQQGAELK-WD 125
            Y   + +  WD
Sbjct: 339 SYVMSSGVTGWD 350


>gi|71276518|ref|ZP_00652793.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Dixon]
 gi|71900741|ref|ZP_00682863.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1]
 gi|170729741|ref|YP_001775174.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
           fastidiosa M12]
 gi|71162695|gb|EAO12422.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Dixon]
 gi|71729511|gb|EAO31620.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1]
 gi|167964534|gb|ACA11544.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa M12]
          Length = 349

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T             A  LE  +  E +  G  G++
Sbjct: 221 RDELAHTKFISEVIRAIVGENPELQTDALTDYVHQAFAHAIELETQWTGEVL-NGIDGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L+ + T+N  PW+    D   + + +FFE R   Y++
Sbjct: 280 VEEMIRYVKYRANKMAGMLGIETLYTETTDNVMPWIRAYADNFTETKTDFFEMRNASYKK 339


>gi|119485472|ref|ZP_01619800.1| hypothetical protein L8106_10031 [Lyngbya sp. PCC 8106]
 gi|119457228|gb|EAW38354.1| hypothetical protein L8106_10031 [Lyngbya sp. PCC 8106]
          Length = 359

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I +     PH       ++   M   A   E  + +  + +  +G+ 
Sbjct: 231 RDELSHVRLYQKLIPEAMQTFPH-----SVEQIYEMFDTAVQHECRWTNHIVGRNILGIT 285

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK----EKNFFETRVT 114
             S EQY +++AN R   IGL+PL+   +Y+++P+  +    D KK    + NFFE  VT
Sbjct: 286 ETSTEQYTKYLANARLRSIGLKPLYTDPRYSKSPYTHLERFSDTKKEAHTKANFFEASVT 345

Query: 115 EYQQGAEL-KWD 125
            Y   + +  WD
Sbjct: 346 SYVMSSGVGGWD 357


>gi|317060491|ref|ZP_07924976.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. D12]
 gi|313686167|gb|EFS23002.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. D12]
          Length = 344

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 9/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I +IK EN + +    +++ R M   A   EI +    +    +G+ 
Sbjct: 216 RDELSHVVLFQKIIREIKAENHNFF---EEEEIRAMFRTAVEQEILWTEHIIGNRILGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK----EKNFFETRVTEY 116
             + E Y +++AN R   IGL P+++  T+NP+  +    D +     + NFFE  VT Y
Sbjct: 273 TETTEAYTKWLANERLRTIGLAPMYEEFTKNPYKHLERFADTEGDGNVKSNFFEGTVTSY 332

Query: 117 QQGAELK-WD 125
              + +  WD
Sbjct: 333 NMSSSIDGWD 342


>gi|269866968|ref|XP_002652448.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220062479|gb|EED41609.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 100

 Score =  113 bits (285), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 2/86 (2%)

Query: 34  SRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF 93
            + ++ EA  +E  +  E++P   +G+N     QY++F+A+R    +G + ++  + NPF
Sbjct: 1   MKDIVREAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPF 59

Query: 94  PWMSEVIDLKKEKNFFETRVTEYQQG 119
            +M E I L+ + NFFE R   YQ+G
Sbjct: 60  DFM-ENISLQGKTNFFERREANYQKG 84


>gi|166367085|ref|YP_001659358.1| ribonucleoside-diphosphate reductase beta chain [Microcystis
           aeruginosa NIES-843]
 gi|166089458|dbj|BAG04166.1| ribonucleoside-diphosphate reductase beta chain [Microcystis
           aeruginosa NIES-843]
          Length = 283

 Score =  113 bits (285), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I +      H       ++   M   A   E  + +  +    +G+ 
Sbjct: 155 RDELSHVRLYQKLIPEAMATFSH-----SVEQIYEMFDTAVKHECRWTNHIVGNDILGIT 209

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK----EKNFFETRVT 114
             S EQY +++AN R   IGLEPL+   KY ++P+  +    D KK    + NFFE  VT
Sbjct: 210 EYSTEQYTKYLANIRLKAIGLEPLYREEKYNKSPYNHLERFSDTKKEGHTKANFFEATVT 269

Query: 115 EYQQGAELK-WD 125
            Y   + L  WD
Sbjct: 270 SYVMSSGLTGWD 281


>gi|332708567|ref|ZP_08428541.1| ribonucleotide reductase, beta subunit [Lyngbya majuscula 3L]
 gi|332352664|gb|EGJ32230.1| ribonucleotide reductase, beta subunit [Lyngbya majuscula 3L]
          Length = 344

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I       P+       ++   M   A   E  + +  +    +G+ 
Sbjct: 216 RDELSHVRLYQKLIPMAMDVFPY-----SSEQIYEMFATAVEHECRWTNHIVGNDILGIT 270

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK----EKNFFETRVT 114
             S E Y +++AN R   IGL+PL+    Y ++P+  +    D KK    + NFFE  VT
Sbjct: 271 ERSTEHYTKYLANIRLRSIGLDPLYKGENYQKSPYSHLERFSDTKKDAHTKANFFEASVT 330

Query: 115 EYQQGAELK-WD 125
            Y   + +  WD
Sbjct: 331 SYVMSSGVSGWD 342


>gi|319790519|ref|YP_004152152.1| ribonucleotide reductase [Thermovibrio ammonificans HB-1]
 gi|317115021|gb|ADU97511.1| ribonucleotide reductase [Thermovibrio ammonificans HB-1]
          Length = 352

 Score =  113 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 7/129 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+      +  +  E    +    + K   M   A   E  ++ + +    +G+N
Sbjct: 224 RDELTHVILFEHFMKDLTDEGFKKY--LTKDKIYDMFRIAVDQEQRFSKKVIGNKILGMN 281

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK----EKNFFETRVTEYQ 117
             S E Y  +IAN+R   +GLEP+F    NP+  +  + D       + NFFE  VT Y 
Sbjct: 282 EQSIEDYTFYIANKRLKALGLEPIFPDRGNPYEHLERIADTGGEANVKANFFEATVTSYN 341

Query: 118 QGAELK-WD 125
           Q   ++ WD
Sbjct: 342 QANAVEGWD 350


>gi|228861279|ref|YP_002854302.1| ribonucleotide reductase small subunit [Soft-shelled turtle
           iridovirus]
 gi|45550045|gb|AAS67856.1| ribonucleotide reductase small subunit [Rana grylio virus 9506]
 gi|194307559|gb|ACF42289.1| ribonucleotide reductase small subunit [Soft-shelled turtle
           iridovirus]
          Length = 387

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 5/129 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK--GFV 58
           +RDE++H+     +   +  E P + TK+  +  +        LE A+      +     
Sbjct: 252 VRDENIHVEGVSKLFETLNSEYPWVVTKDLIELFKEDAERVAELEEAFVDLAFQECGPVC 311

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDLKKEKNFFETRVTEY 116
           GL     + Y+ ++ N R   +GL  L +      P PW+  +ID     NFFE  VTEY
Sbjct: 312 GLEPKQVKDYVLYVINLRAANMGLPKLIERAPEACPIPWVKWLIDGADLTNFFENHVTEY 371

Query: 117 QQGA-ELKW 124
           + G     W
Sbjct: 372 ETGGLTGSW 380


>gi|15837799|ref|NP_298487.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
           fastidiosa 9a5c]
 gi|28198393|ref|NP_778707.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
           fastidiosa Temecula1]
 gi|9106169|gb|AAF84007.1|AE003954_4 ribonucleoside-diphosphate reductase beta chain [Xylella fastidiosa
           9a5c]
 gi|28056463|gb|AAO28356.1| ribonucleoside-diphosphate reductase beta chain [Xylella fastidiosa
           Temecula1]
          Length = 346

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T             A  LE  +  E +  G  G++
Sbjct: 218 RDELAHTKFISEVIRAIVGENPELQTDALTDYVHQAFAHAIELETQWTGEVL-DGIDGID 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G++ L+ + T+N  PW+    D   + + +FFE R   Y++
Sbjct: 277 VEEMIRYVKYRANKMAGMLGIQTLYTETTDNVMPWIRAYADNFTETKTDFFEMRNASYKK 336


>gi|307151334|ref|YP_003886718.1| ribonucleotide reductase [Cyanothece sp. PCC 7822]
 gi|306981562|gb|ADN13443.1| ribonucleotide reductase [Cyanothece sp. PCC 7822]
          Length = 355

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I +     PH   K        M   A   E  + +  +    +G+ 
Sbjct: 227 RDELSHVRLYQKIIAEAMQTFPHSVDK-----VYEMFDTAVHHECRWTNHIVGDNILGIT 281

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK----EKNFFETRVT 114
             S EQY +++AN R   IGL+PL+   KY ++P+  +    D KK    + NFFE  VT
Sbjct: 282 ESSTEQYTKYLANIRLKAIGLKPLYADEKYQKSPYSHLERFSDTKKDAHTKANFFEATVT 341

Query: 115 EYQQGAELK-WD 125
            Y   + +  WD
Sbjct: 342 SYVMSSGVTGWD 353


>gi|49237365|ref|YP_031646.1| ribonucleoside diphosphate reductase beta subunit-like protein
           [Frog virus 3]
 gi|47060183|gb|AAT09727.1| ribonucleoside diphosphate reductase beta subunit-like protein
           [Frog virus 3]
          Length = 387

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 5/129 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK--GFV 58
           +RDE++H+     +   +  E P + TK+  +  +        LE A+      +     
Sbjct: 252 VRDENIHVEGVSKLFETLNSEYPWVVTKDLIELFKEDAERVAELEEAFVDLAFQECGPVC 311

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDLKKEKNFFETRVTEY 116
           GL     + Y+ ++ N R   +GL  L +      P PW+  +ID     NFFE  VTEY
Sbjct: 312 GLEPKQVKDYVLYVINLRAANMGLPKLIERAPEACPIPWVKWLIDGADLTNFFENHVTEY 371

Query: 117 QQGA-ELKW 124
           + G     W
Sbjct: 372 ETGGLTGSW 380


>gi|71901120|ref|ZP_00683227.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1]
 gi|182681036|ref|YP_001829196.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
           fastidiosa M23]
 gi|71729125|gb|EAO31249.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1]
 gi|182631146|gb|ACB91922.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa M23]
 gi|307579504|gb|ADN63473.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
           fastidiosa subsp. fastidiosa GB514]
          Length = 349

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T             A  LE  +  E +  G  G++
Sbjct: 221 RDELAHTKFISEVIRAIVGENPELQTDALTDYVHQAFAHAIELETQWTGEVL-DGIDGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G++ L+ + T+N  PW+    D   + + +FFE R   Y++
Sbjct: 280 VEEMIRYVKYRANKMAGMLGIQTLYTETTDNVMPWIRAYADNFTETKTDFFEMRNASYKK 339


>gi|51869996|ref|YP_073549.1| Ribonucleotide reductase [Lymphocystis disease virus - isolate
           China]
 gi|51858204|gb|AAU10888.1| Ribonucleotide reductase [Lymphocystis disease virus - isolate
           China]
          Length = 374

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 40/126 (31%), Positives = 58/126 (46%), Gaps = 3/126 (2%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVG 59
           +RDE++H+     +   I  E P + TK+F +   T+  E   LE A+            
Sbjct: 250 IRDENVHVEGLCKLFKTIVSEYPFILTKDFYKAVETLQQEVLKLETAFVDLVFIEDKLKN 309

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L       Y+++I  RR  Q+GL       +NP  W+S +I  +   NFFE RVTEY  G
Sbjct: 310 LKRVDVINYVKYILQRRTVQLGLSNKTDL-QNPILWVSWLISGRDVTNFFENRVTEYDVG 368

Query: 120 A-ELKW 124
             E  W
Sbjct: 369 GLEGDW 374


>gi|122921307|pdb|2O1Z|A Chain A, Plasmodium Vivax Ribonucleotide Reductase Subunit R2
           (Pv086155)
 gi|122921308|pdb|2O1Z|B Chain B, Plasmodium Vivax Ribonucleotide Reductase Subunit R2
           (Pv086155)
          Length = 311

 Score =  113 bits (283), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 52/96 (54%), Gaps = 8/96 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P        +  + ++ EA  +E ++  E++P   +G+N
Sbjct: 223 RDEGLHTDFNCLIYSLLENKLPE-------EVVQNIVKEAVEVERSFICESLPCDLIGMN 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
           +    QY++F+A+R    +G   +F + +NPF WM 
Sbjct: 276 SRLMSQYIEFVADRLLECLGSPKIF-HAKNPFNWMD 310


>gi|269468252|gb|EEZ79942.1| ribonucleotide-diphosphate reductase subunit beta [uncultured SUP05
           cluster bacterium]
          Length = 319

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    KE + +   M  EA   E  +A      G 
Sbjct: 177 RDEALHLTGTQHMLNLMRDGKDDPDMEKIAKECENEVIQMFKEACEQEKDWAEYLFRDGS 236

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKNF-FETRVT 114
            +GLNA   +QY+++I N R + +GL+P+F ++  NP PW++  +D    +    ET +T
Sbjct: 237 MIGLNADILKQYLEYITNVRMNALGLKPIFDEHVTNPLPWINSWLDSDNVQVAPQETEIT 296

Query: 115 EYQQGA 120
            Y   A
Sbjct: 297 SYLVSA 302


>gi|332141553|ref|YP_004427291.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas
           macleodii str. 'Deep ecotype']
 gi|327551575|gb|AEA98293.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas
           macleodii str. 'Deep ecotype']
          Length = 376

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 5/105 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL+    ++N      ++P +    +E ++++R +   A   E  +A      G 
Sbjct: 237 RDENLHLSSTQHILNLWAKGKDDPEMAQIAQECKEEARAIFMNAVEQEKEWADYLFKTGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101
            +GLN     QY+++IAN+R   IGL+  F  + NP PWM+  ++
Sbjct: 297 MIGLNKEILCQYVEYIANQRMSAIGLDTPFDISSNPLPWMNNYLN 341


>gi|294955280|ref|XP_002788462.1| ribonucleoside-diphosphate reductase small chain, putative
           [Perkinsus marinus ATCC 50983]
 gi|239903931|gb|EER20258.1| ribonucleoside-diphosphate reductase small chain, putative
           [Perkinsus marinus ATCC 50983]
          Length = 157

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 2/74 (2%)

Query: 41  ATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
           A  +E  +  + +P G +G+NA    +Y++F+A+R    +G   ++    NPF WM+ +I
Sbjct: 38  AVNVEREFITDALPVGLIGMNAELMGRYIEFVADRLLVALGYAKIYNSA-NPFDWMT-MI 95

Query: 101 DLKKEKNFFETRVT 114
            L+ + NFFE RV 
Sbjct: 96  SLQGKTNFFEKRVG 109


>gi|71033209|ref|XP_766246.1| ribonucleotide-diphosphate reductase small subunit [Theileria parva
           strain Muguga]
 gi|68353203|gb|EAN33963.1| ribonucleotide-diphosphate reductase small subunit, putative
           [Theileria parva]
          Length = 308

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 60/112 (53%), Gaps = 19/112 (16%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +FG  + + +K + P        +  + ++ EA ++E +Y  +++P   +G+N
Sbjct: 201 RDEGLHADFGCFIYHNLKHKLPE-------EAVQQIIKEAVVVERSYICDSLPCDLIGMN 253

Query: 62  A----------PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK 103
           +              QY++F+A+R    +G+ P++  T NPF WM ++I ++
Sbjct: 254 SRKKILTHCLIELMTQYIEFVADRLLQALGVRPVYNVT-NPFDWM-QLISVQ 303


>gi|16332312|ref|NP_443040.1| hypothetical protein slr0591 [Synechocystis sp. PCC 6803]
 gi|1653942|dbj|BAA18852.1| slr0591 [Synechocystis sp. PCC 6803]
          Length = 355

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I +      H        +   M  +A   E  + +  +    +G+ 
Sbjct: 227 RDELSHVRLYQKLIPEAMQVFTH-----STDQIYEMFDKAVEFECRWTNHIVGNNILGIT 281

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK----EKNFFETRVT 114
             S EQY +++AN R   IGL+PL+   +Y ++P+  +    D KK    + NFFE  VT
Sbjct: 282 ESSTEQYTKYLANSRLRAIGLDPLYTDARYGKSPYTHLERFSDTKKEAHTKANFFEATVT 341

Query: 115 EYQQGAELK-WD 125
            Y   + +  WD
Sbjct: 342 SYVMSSGVSGWD 353


>gi|78486104|ref|YP_392029.1| ribonucleotide-diphosphate reductase subunit beta [Thiomicrospira
           crunogena XCL-2]
 gi|78364390|gb|ABB42355.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Thiomicrospira crunogena XCL-2]
          Length = 377

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL+    +IN +    ++P +    KE ++K   +  EA   E  +A      G 
Sbjct: 238 RDEALHLSGTQHLINILSEGKDDPEMMEIAKENEEKVYEIFREAAEQEKEWADYLFKDGS 297

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
            +GLNA   + Y+++I N R   I L P+F+   NP PWM+  +
Sbjct: 298 MIGLNASILKDYVEYITNTRIKAIKLNPIFENKSNPLPWMNNWL 341


>gi|78049716|ref|YP_365891.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
 gi|78038146|emb|CAJ25891.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
          Length = 347

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  EN  L   E           A  LE  +  E +  G  G++
Sbjct: 219 RDELAHTKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L++   +N  PW+    D   + + +FFE R   Y++
Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337


>gi|70921511|ref|XP_734071.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56506464|emb|CAH78308.1| hypothetical protein PC000956.02.0 [Plasmodium chabaudi chabaudi]
          Length = 87

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 25/75 (33%), Positives = 46/75 (61%), Gaps = 2/75 (2%)

Query: 48  YAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107
           +   ++P   +G+N+    QY++F+A+R    +G   +F +++NPF WM  +I L+ + N
Sbjct: 1   FLVWSLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKVF-HSKNPFSWMD-LISLQGKTN 58

Query: 108 FFETRVTEYQQGAEL 122
           FFE RV +YQ+   +
Sbjct: 59  FFEKRVADYQKSGVM 73


>gi|170077010|ref|YP_001733648.1| ribonucleoside-diphosphate reductase, beta subunit [Synechococcus
           sp. PCC 7002]
 gi|169884679|gb|ACA98392.1| ribonucleoside-diphosphate reductase, beta subunit [Synechococcus
           sp. PCC 7002]
          Length = 352

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I +      H            M+  A   E  + +  +    +G+ 
Sbjct: 224 RDELSHVRLFQKLIPEAMATFDH-----SVDHIYEMVERAVQYECQWTNHIVGNDILGIT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK----EKNFFETRVT 114
             S E Y +++AN R   IGLEPL+K   Y ++P+  +    D KK    + NFFE  VT
Sbjct: 279 EQSTEIYTKYLANIRLQAIGLEPLYKGDQYKKSPYRHLERFSDTKKEGNTKANFFEAGVT 338

Query: 115 EYQQGAELK-WD 125
            Y   + +  WD
Sbjct: 339 SYVMSSGITGWD 350


>gi|195953600|ref|YP_002121890.1| Ribonucleoside-diphosphate reductase [Hydrogenobaculum sp. Y04AAS1]
 gi|195933212|gb|ACG57912.1| Ribonucleoside-diphosphate reductase [Hydrogenobaculum sp. Y04AAS1]
          Length = 319

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 34/113 (30%), Positives = 65/113 (57%), Gaps = 4/113 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DE+ HL FGI ++N++  +       +++ K R ++ EA  +E  YA   MP+  +GL
Sbjct: 209 LKDETRHLAFGIYLLNELLKDK---NKNDYKDKFRVLMEEAVDIETEYARVAMPEKIIGL 265

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 113
           +  +   Y++++A+RR   +G + ++   +NP  W++   DL    NFFE +V
Sbjct: 266 SFETYTSYVKYLADRRMRSLGFDAIY-GQKNPMKWLTTQTDLPDLTNFFEAKV 317


>gi|332993182|gb|AEF03237.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas sp.
           SN2]
          Length = 376

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 5/105 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL+    ++N      ++P +    ++ ++++R +   A   E  +A      G 
Sbjct: 237 RDENLHLSSTQHILNLWARSKDDPEMAQIAQDCKEEARAIFMNAVEQEKEWADYLFKTGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101
            +GLN      Y+++IAN+R   IGL+  F+ + NP PWM+  ++
Sbjct: 297 MIGLNKEILCSYVEYIANQRMTAIGLDAPFEISSNPLPWMNNYLN 341


>gi|326560494|gb|EGE10876.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 7169]
 gi|326570427|gb|EGE20467.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis BC8]
 gi|326575699|gb|EGE25622.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis CO72]
 gi|326577166|gb|EGE27060.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis O35E]
          Length = 376

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +IN ++   ++P +    +  Q+++  +   A   E A+A+     G 
Sbjct: 237 RDEALHLNGTQHMINLMRQGRDDPDMVAIAEACQEEAIEIFKSAAEQEKAWANYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY++FI N R   IGL  +F+   NP PW++  +     +    ET +T 
Sbjct: 297 MIGLNRDILCQYIEFITNTRMSAIGLPAIFETKTNPIPWINAWLSSDNVQVAPQETEITT 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|296113118|ref|YP_003627056.1| ribonucleoside-diphosphate reductase 1 subunit beta [Moraxella
           catarrhalis RH4]
 gi|295920812|gb|ADG61163.1| ribonucleoside-diphosphate reductase 1 subunit beta [Moraxella
           catarrhalis RH4]
          Length = 380

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +IN ++   ++P +    +  Q+++  +   A   E A+A+     G 
Sbjct: 241 RDEALHLNGTQHMINLMRQGRDDPDMVAIAEACQEEAIEIFKSAAEQEKAWANYLFKDGS 300

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY++FI N R   IGL  +F+   NP PW++  +     +    ET +T 
Sbjct: 301 MIGLNRDILCQYIEFITNTRMSAIGLPAIFETKTNPIPWINAWLSSDNVQVAPQETEITT 360

Query: 116 Y 116
           Y
Sbjct: 361 Y 361


>gi|326560111|gb|EGE10501.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 46P47B1]
 gi|326564174|gb|EGE14410.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 12P80B1]
 gi|326573404|gb|EGE23372.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 101P30B1]
          Length = 376

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +IN ++   ++P +    +  Q+++  +   A   E A+A+     G 
Sbjct: 237 RDEALHLNGTQHMINLMRQGRDDPDMVAIAEACQEEAIEIFKSAAEQEKAWANYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY++FI N R   IGL  +F+   NP PW++  +     +    ET +T 
Sbjct: 297 MIGLNRDILCQYIEFITNTRMSAIGLPAIFETKTNPIPWINAWLSSDNVQVAPQETEITT 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|330949821|gb|EGH50081.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae Cit 7]
          Length = 65

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 42/65 (64%), Positives = 48/65 (73%)

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N    E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 1   NGAGMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 60

Query: 121 ELKWD 125
            L WD
Sbjct: 61  ALSWD 65


>gi|71280050|ref|YP_269047.1| ribonucleotide-diphosphate reductase subunit beta [Colwellia
           psychrerythraea 34H]
 gi|71145790|gb|AAZ26263.1| ribonucleotide reductase, beta subunit [Colwellia psychrerythraea
           34H]
          Length = 376

 Score =  110 bits (277), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N  +   ++P +   ++E + +   +  +    E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNNWRSGKDDPEMKIISEELRDEGLQIFLDVVEQEKEWAQYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
            +GLNA    QY+++I+N+R   IG    F    NP PWM+  +
Sbjct: 297 MIGLNADILNQYIEYISNQRLTAIGFGAPFDIKSNPLPWMNAYL 340


>gi|225734460|gb|ACO25228.1| hypothetical protein [Epizootic haematopoietic necrosis virus]
          Length = 387

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 5/129 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK--GFV 58
           +RDE++H+     +   +  E P +  ++  +  +        LE A+      +     
Sbjct: 252 VRDENMHVEGVSKLFETLNSEYPWVVNEDLIELFKEDAERVAELEEAFVDLAFQECGPVC 311

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDLKKEKNFFETRVTEY 116
           GL     + Y+ ++ N R   +GL  L +      P PW+  +ID     NFFE  VTEY
Sbjct: 312 GLEPKQVKDYVLYVINLRASNMGLPRLIERAPEACPIPWVKWLIDGADLTNFFENHVTEY 371

Query: 117 QQGA-ELKW 124
           + G     W
Sbjct: 372 ETGGLTGSW 380


>gi|45686047|ref|YP_003810.1| unknown [Ambystoma tigrinum virus]
 gi|37722471|gb|AAP33216.1| unknown [Ambystoma tigrinum stebbensi virus]
          Length = 387

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 5/129 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK--GFV 58
           +RDE++H+     +   +  E P + T++  +  +        LE A+      +     
Sbjct: 252 VRDENIHVEGVSKLFETLNSEYPWVVTEDLIELFKEDAERVAELEEAFVDLAFQECGPVC 311

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDLKKEKNFFETRVTEY 116
           GL     + Y+ ++ N R   +GL  L +      P PW+  +ID     NFFE  VTEY
Sbjct: 312 GLEPKQVKDYVLYVINLRASNMGLPRLIERAPEACPIPWVKWLIDGADLTNFFENHVTEY 371

Query: 117 QQGA-ELKW 124
           + G     W
Sbjct: 372 ETGGLTGSW 380


>gi|13358428|ref|NP_078636.1| Ribonucleotide reductase small subunit [Lymphocystis disease virus
           1]
          Length = 378

 Score =  110 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 3/119 (2%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK--GFV 58
           +RDE++H+     +      E   + T+EF    R +  E   LE  +            
Sbjct: 251 IRDENIHVEGLCKLFKTFISEYSFILTEEFFSAVRKIQAEVLQLETDFIILLFTNITEIK 310

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNFFETRVTEY 116
           GL       Y+++I  RR  Q+GL    +    NP  W+S +I  +   NFFE RVTEY
Sbjct: 311 GLTKLCMINYVKYILQRRTEQLGLLESTEVLLTNPIDWISWLIAGRNITNFFENRVTEY 369


>gi|326565416|gb|EGE15593.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 103P14B1]
          Length = 376

 Score =  110 bits (276), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +IN ++   ++P +    +  Q+++  +   A   E A+A+     G 
Sbjct: 237 RDEALHLNGTQHMINLMRQGRDDPDMVAIAEACQEEAIEIFKSAAEQEKAWANYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY++FI N R   IGL  +F+   NP PW++  +     +    ET +T 
Sbjct: 297 MIGLNRDILCQYIEFITNTRMSAIGLPAIFETKTNPIPWINAWLSSDNVQVAPQETEITT 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|170587050|ref|XP_001898292.1| ribonucleotide reductase 2 [Brugia malayi]
 gi|158594687|gb|EDP33271.1| ribonucleotide reductase 2, putative [Brugia malayi]
          Length = 288

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 62/133 (46%), Gaps = 15/133 (11%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEF-------------QQKSRTMLHEATLLEIAYAH 50
           E++H      +I+    +      ++F              +K  +M +     +  Y  
Sbjct: 145 ENIHSEMYSKMIDTYIRDQKQKKFRKFCVTLCFLEINLSNYKKFTSMFNACIDAKQEYLT 204

Query: 51  ETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFE 110
           E +P   +G+N     QY++++A+    ++    ++ +++NPF +M E I ++ + NFFE
Sbjct: 205 EALPVDLIGINCKLMCQYIEYVADHLLTELHCAKIY-HSDNPFDFM-ERISIEAKTNFFE 262

Query: 111 TRVTEYQQGAELK 123
            RV+EYQ+   L 
Sbjct: 263 KRVSEYQKAGVLS 275


>gi|21244791|ref|NP_644373.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           axonopodis pv. citri str. 306]
 gi|325927516|ref|ZP_08188754.1| ribonucleotide reductase, beta subunit [Xanthomonas perforans
           91-118]
 gi|21110489|gb|AAM38909.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           axonopodis pv. citri str. 306]
 gi|325542109|gb|EGD13613.1| ribonucleotide reductase, beta subunit [Xanthomonas perforans
           91-118]
          Length = 347

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  EN  L   E           A  LE  +  E +  G  G++
Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L++   +N  PW+    D   + + +FFE R   Y++
Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337


>gi|188578920|ref|YP_001915849.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           oryzae pv. oryzae PXO99A]
 gi|188523372|gb|ACD61317.1| ribonucleoside-diphosphate reductase, beta subunit [Xanthomonas
           oryzae pv. oryzae PXO99A]
          Length = 347

 Score =  110 bits (275), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  EN  L   E           A  LE  +  E +  G  G++
Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L++   +N  PW+    D   + + +FFE R   Y++
Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337


>gi|58580098|ref|YP_199114.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           oryzae pv. oryzae KACC10331]
 gi|84622097|ref|YP_449469.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           oryzae pv. oryzae MAFF 311018]
 gi|58424692|gb|AAW73729.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas oryzae
           pv. oryzae KACC10331]
 gi|84366037|dbj|BAE67195.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas oryzae
           pv. oryzae MAFF 311018]
          Length = 347

 Score =  110 bits (275), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  EN  L   E           A  LE  +  E +  G  G++
Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L++   +N  PW+    D   + + +FFE R   Y++
Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337


>gi|229916488|ref|YP_002885134.1| ribonucleotide-diphosphate reductase subunit beta [Exiguobacterium
           sp. AT1b]
 gi|229467917|gb|ACQ69689.1| Ribonucleoside-diphosphate reductase [Exiguobacterium sp. AT1b]
          Length = 346

 Score =  110 bits (275), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 6/125 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLW-TKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE  H  F   ++  +  ENP +    +F Q     + EA  LEI +    + +   GL
Sbjct: 216 RDEMQHSYFISQLLRAVLTENPKIDENGQFSQFVYDTMAEAVDLEIEWCEYVL-RDLDGL 274

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID--LK-KEKNFFETRVTEY 116
           +      Y++++AN+R   IGL  L++   E+  PW+    D  L   + +FFE +   Y
Sbjct: 275 DVSEMRDYVKYLANKRLRVIGLNDLYEGFDEDVMPWIRAYSDDSLNATKSDFFEQKSRSY 334

Query: 117 QQGAE 121
            +  +
Sbjct: 335 AKVTD 339


>gi|166710317|ref|ZP_02241524.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           oryzae pv. oryzicola BLS256]
          Length = 347

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  EN  L   E           A  LE  +  E +  G  G++
Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAINLETQWTAEVL-DGIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L++   +N  PW+    D   + + +FFE R   Y++
Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337


>gi|225850104|ref|YP_002730338.1| ribonucleoside-diphosphate reductase, beta subunit [Persephonella
           marina EX-H1]
 gi|225645787|gb|ACO03973.1| ribonucleoside-diphosphate reductase, beta subunit [Persephonella
           marina EX-H1]
          Length = 329

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 3/116 (2%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKE-FQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60
           DESLHL  GI+ I  I  ENP +   E F +  +  + +A  LE+ Y           G+
Sbjct: 212 DESLHLQNGIEAILTIVEENPEIVDDEKFVENIKETIIDAVELELNYLKTKFGGTTIFGV 271

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
           +    E+YM++IA+RR  ++G +P FK  +NP  ++ +  D+KK  NFFE   TEY
Sbjct: 272 SYKELEKYMKYIADRRLEELGFDPQFKIDQNPLKFL-QKEDVKKLTNFFEVSSTEY 326


>gi|300723737|ref|YP_003713044.1| ribonucleoside-diphosphate reductase 1 subunit beta [Xenorhabdus
           nematophila ATCC 19061]
 gi|297630261|emb|CBJ90912.1| ribonucleoside-diphosphate reductase 1, beta subunit [Xenorhabdus
           nematophila ATCC 19061]
          Length = 376

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    KE +QK   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAKECEQKCYDLFVDAAEQEKEWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLKLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|18656506|gb|AAL77807.1|AF389451_14 ribonucleoside-diphosphate reductase beta subunit [Tiger frog
           virus]
          Length = 387

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 5/129 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK--GFV 58
           +RDE++H+     +   +  E P + TK+  +  +        LE A+      +     
Sbjct: 252 VRDENIHVEGVSKLFETLNSEYPWVVTKDIIELFKEDAERVAELEEAFVDLAFQECGPVC 311

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDLKKEKNFFETRVTEY 116
            L     + Y+ ++ N R   +GL  L +      P PW+  +ID     NFFE  VTEY
Sbjct: 312 ELEPKQVKDYVLYVINLRAANMGLPKLIERAPEACPIPWVKWLIDGADLTNFFENHVTEY 371

Query: 117 QQGA-ELKW 124
           + G     W
Sbjct: 372 ETGGLTGSW 380


>gi|326796346|ref|YP_004314166.1| ribonucleoside-diphosphate reductase [Marinomonas mediterranea
           MMB-1]
 gi|326547110|gb|ADZ92330.1| Ribonucleoside-diphosphate reductase [Marinomonas mediterranea
           MMB-1]
          Length = 377

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E +Q+   +  EA   E  +A      G 
Sbjct: 238 RDEALHLTGTQHMLNLMTSGKDDPEMAIIAQECRQEITDIFIEAAQQEKEWAKYLFKDGS 297

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLNA    QY+++I+N R   +GLEP F+   NP PW++  ++    +    E  ++ 
Sbjct: 298 MIGLNAEILGQYVEYISNVRMQAVGLEPAFETKSNPIPWINAWLVSDNVQVAPQEAEISS 357

Query: 116 Y 116
           Y
Sbjct: 358 Y 358


>gi|172058301|ref|YP_001814761.1| ribonucleotide-diphosphate reductase subunit beta [Exiguobacterium
           sibiricum 255-15]
 gi|171990822|gb|ACB61744.1| Ribonucleoside-diphosphate reductase [Exiguobacterium sibiricum
           255-15]
          Length = 347

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 6/125 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE  H  F   ++  +  E+P +     F +        A  LEI ++   + +   GL
Sbjct: 217 RDELQHSYFISQLLRAVLTEHPDIDADGSFTKFVYATFERAVDLEIEWSEYVL-RDLDGL 275

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK---EKNFFETRVTEY 116
           +      Y++++AN+R   IGL+ L++ + E+  PW+    D      + +FFE +   Y
Sbjct: 276 DVSEMRDYVKYLANKRLRVIGLDDLYEGHDEDVMPWIRAYSDDSMNATKSDFFEQKSRSY 335

Query: 117 QQGAE 121
            +  +
Sbjct: 336 AKVTD 340


>gi|289664735|ref|ZP_06486316.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. vasculorum NCPPB702]
          Length = 349

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  EN  L   E           A  LE  +  E +  G  G++
Sbjct: 221 RDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETVWTAEVL-DGIDGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L++   +N  PW+    D   + + +FFE R   Y++
Sbjct: 280 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 339


>gi|295098106|emb|CBK87196.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 420

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 281 RDEALHLTGTQHMLNLLRSGADDPEMAAIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 340

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 341 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 400

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 401 YLVGQIDSEVNTD 413


>gi|297724673|ref|NP_001174700.1| Os06g0257450 [Oryza sativa Japonica Group]
 gi|255676900|dbj|BAH93428.1| Os06g0257450 [Oryza sativa Japonica Group]
          Length = 162

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 2/64 (3%)

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +N     QY++F+A+R    +G + ++    NPF WM E+I L+ + NFFE RV +YQ+ 
Sbjct: 83  MNGDLMSQYIEFVADRLLMALGCKKMYNVA-NPFDWM-ELISLQGKTNFFEKRVGDYQKA 140

Query: 120 AELK 123
           + + 
Sbjct: 141 SVMS 144


>gi|289670858|ref|ZP_06491933.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. musacearum NCPPB4381]
          Length = 349

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  EN  L   +           A  LE  +  E +  G  G++
Sbjct: 221 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L++   +N  PW+    D   + + +FFE R   Y++
Sbjct: 280 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 339


>gi|294625675|ref|ZP_06704297.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 11122]
 gi|294664800|ref|ZP_06730124.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 10535]
 gi|292600044|gb|EFF44159.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 11122]
 gi|292605431|gb|EFF48758.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 10535]
          Length = 347

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  EN  L   +           A  LE  +  E +  G  G++
Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L++   +N  PW+    D   + + +FFE R   Y++
Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337


>gi|288549884|ref|ZP_06390831.1| ribonucleoside-diphosphate reductase, beta subunit [Enterobacter
           cancerogenus ATCC 35316]
 gi|288317051|gb|EFC55989.1| ribonucleoside-diphosphate reductase, beta subunit [Enterobacter
           cancerogenus ATCC 35316]
          Length = 420

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 281 RDEALHLTGTQHMLNLLRSGTDDPEMAAIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 340

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 341 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 400

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 401 YLVGQIDSEVNTD 413


>gi|326784480|ref|YP_004325029.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM7]
 gi|310004513|gb|ADO98905.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM7]
          Length = 388

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 8/127 (6%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDES HL     ++       ++P +    +E Q+    M       E A+A+    +G 
Sbjct: 247 RDESQHLVLTQQILKNWTEGKDDPEMKEIAEEEQETVEQMFKACVDEEKAWANYLFKEGS 306

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEKNF-FETRV 113
            +GLN      Y+++IANRR   IGL+P++      NP PW    ++ K ++N   ET +
Sbjct: 307 MIGLNERLLHNYVEWIANRRMKAIGLKPIYDQPLRNNPLPWTEHWLNSKGQQNAPQETEI 366

Query: 114 TEYQQGA 120
             Y  G 
Sbjct: 367 ESYVVGG 373


>gi|213609160|ref|ZP_03368986.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-2068]
          Length = 144

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 5   RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 64

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 65  MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 124

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 125 YLVGQIDSEVDTD 137


>gi|163784572|ref|ZP_02179421.1| ribonucleotide-diphosphate [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880158|gb|EDP73813.1| ribonucleotide-diphosphate [Hydrogenivirga sp. 128-5-R1-1]
          Length = 139

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 3/116 (2%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60
           DESLHL  GI+ I  I  ENP +    +F +  R  + +A  LE+ Y           G+
Sbjct: 22  DESLHLQNGIEAILTIIEENPEIVDDIKFVENIRDTIIDAVELELNYLKTKFGGTTIFGV 81

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
           +    E YM++IA+RR  ++G +P F   +NP  ++ +  D+KK  NFFE   TEY
Sbjct: 82  SYKELEMYMKYIADRRLEELGFDPQFNIQQNPLKFL-QKEDVKKLTNFFEVSSTEY 136


>gi|148244629|ref|YP_001219323.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Vesicomyosocius okutanii HA]
 gi|146326456|dbj|BAF61599.1| ribonucleoside-diphosphate reductase beta subunit [Candidatus
           Vesicomyosocius okutanii HA]
          Length = 378

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 6/125 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    KE +++  TM  EA   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLMSDGKDDPDMKKIAKECEKEVITMFKEACEQEKDWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
            +GLNA   +QY+++I N R   + L P+F    NP PW++  +D    +    ET +T 
Sbjct: 297 MIGLNAKMLKQYLEYITNVRMKALNLSPVFDECINPLPWINHWLDSDNVQVAPQETEITS 356

Query: 116 YQQGA 120
           Y   A
Sbjct: 357 YLVSA 361


>gi|61806369|ref|YP_214728.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM4]
 gi|61563913|gb|AAX46968.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM4]
          Length = 387

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVINQIKI-ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           RDES HL     ++ +    ++P +    KE +   + M       E A+A     +G  
Sbjct: 247 RDESQHLVITQQILKKWADGDDPEMQEIAKEEKSFVKDMFRNTVNEEKAWADYLFKEGSM 306

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEKNF-FETRVT 114
           +GLNA     Y+++IANRR   IGL+P++      NP PW    ++ K ++N   ET + 
Sbjct: 307 IGLNARLLNNYVEWIANRRMKAIGLDPIYDQPLRNNPLPWTEHWLNSKGQQNAPQETEIE 366

Query: 115 EYQQGA 120
            Y  G 
Sbjct: 367 SYVIGG 372


>gi|161502570|ref|YP_001569682.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. arizonae serovar 62:z4,z23:-- str.
           RSK2980]
 gi|160863917|gb|ABX20540.1| hypothetical protein SARI_00614 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 376

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMADIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQIDSEVDTD 369


>gi|90412217|ref|ZP_01220223.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           profundum 3TCK]
 gi|90326941|gb|EAS43326.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           profundum 3TCK]
          Length = 377

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+   +  EA   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLLRGRHDDPEMADIAQECQQECFEIFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL+  +    +NP PW++  + 
Sbjct: 297 MIGLNKEILCQYVEYITNLRMKAVGLDQAYPGANQNPIPWINSWLS 342


>gi|225849393|ref|YP_002729557.1| ribonucleoside-diphosphate reductase subunit beta
           [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644764|gb|ACN99814.1| ribonucleoside-diphosphate reductase, beta subunit
           [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 326

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 3/116 (2%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60
           DESLHL  GI+ I  +  ENP +     F +  R  + +A  LE+ Y           G+
Sbjct: 209 DESLHLQNGIEAILTMVEENPEIVDDYNFVENIRQSIIDAVELELNYLKTKFGGTTIFGV 268

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
           +    E+YM++IA+RR  ++G +P F   +NP  ++ +  D+KK  NFFE   TEY
Sbjct: 269 SYNELERYMKYIADRRLVELGFDPQFGIDQNPLKFL-QKEDVKKLTNFFEVSSTEY 323


>gi|331642864|ref|ZP_08343999.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H736]
 gi|331039662|gb|EGI11882.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H736]
          Length = 449

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 310 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 369

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 370 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 429

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 430 YLVGQIDSEVDTD 442


>gi|213021870|ref|ZP_03336317.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 277

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 138 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 197

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 198 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 257

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 258 YLVGQIDSEVDTD 270


>gi|290473788|ref|YP_003466662.1| ribonucleoside-diphosphate reductase 1 subunit beta [Xenorhabdus
           bovienii SS-2004]
 gi|289173095|emb|CBJ79868.1| ribonucleoside-diphosphate reductase 1, beta subunit [Xenorhabdus
           bovienii SS-2004]
          Length = 376

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIARECEQQCYDLFVQAAEQEKEWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLKLPFEARSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|188996383|ref|YP_001930634.1| Ribonucleoside-diphosphate reductase [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931450|gb|ACD66080.1| Ribonucleoside-diphosphate reductase [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 326

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 3/116 (2%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAYAHETMPKG-FVGL 60
           DESLHL  GI+ I  +  ENP +    +F +  R  + +A  LE+ Y           G+
Sbjct: 209 DESLHLQNGIEAILTMVEENPEIVDDYQFVENIRQSIIDAVELELNYLKTKFGGTTIFGV 268

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
           +    E+YM++IA+RR  ++G +P F   +NP  ++ +  D+KK  NFFE   TEY
Sbjct: 269 SYGELERYMKYIADRRLIELGFDPQFGIDQNPLKFL-QKEDVKKLTNFFEVSSTEY 323


>gi|157879968|pdb|1RNR|A Chain A, Autocatalytic Generation Of Dopa In The Engineered Protein
           R2 F208y From Escherichia Coli Ribonucleotide Reductase
           And Crystal Structure Of The Dopa-208 Protein
 gi|157879969|pdb|1RNR|B Chain B, Autocatalytic Generation Of Dopa In The Engineered Protein
           R2 F208y From Escherichia Coli Ribonucleotide Reductase
           And Crystal Structure Of The Dopa-208 Protein
          Length = 375

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F    NP PW++  ++    +    E  V+ 
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 356 YLVGQIDSEVDTD 368


>gi|257454213|ref|ZP_05619483.1| ribonucleoside-diphosphate reductase, beta subunit [Enhydrobacter
           aerosaccus SK60]
 gi|257448386|gb|EEV23359.1| ribonucleoside-diphosphate reductase, beta subunit [Enhydrobacter
           aerosaccus SK60]
          Length = 377

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 10/134 (7%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +IN  Q   ++P +    ++ QQ++  +  +A   E A+A      G 
Sbjct: 237 RDEALHLNGTQHMINLMQWGKDDPDMVEIAQDCQQQAIEIFKDAAEQEKAWAKYLFKNGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS-EVIDLKKEKNFFETRVT 114
            +GLN     QY+++I N R   IGL P+F   + NP PW++  +     +    E+ +T
Sbjct: 297 MIGLNENILVQYVEYITNLRMDAIGLPPIFAAIKNNPIPWINAWLSSDNVQVAPQESEIT 356

Query: 115 EY---QQGAELKWD 125
            Y   Q  AEL  D
Sbjct: 357 SYLVGQIDAELSDD 370


>gi|163803511|ref|ZP_02197381.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp. AND4]
 gi|159172687|gb|EDP57538.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp. AND4]
          Length = 377

 Score =  107 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDESLHLN    +IN ++            +E +Q+   +  EA   E  +A      G 
Sbjct: 237 RDESLHLNGTQHMINLLRNGQDDFIFMQIAEEVKQECFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   + + T NP PW++  + 
Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPKAYPEATTNPIPWINAWLS 342


>gi|494379|pdb|1MRR|A Chain A, Substitution Of Manganese For Iron In Ribonucleotide
           Reductase From Escherichia Coli. Spectroscopic And
           Crystallographic Characterization
 gi|494380|pdb|1MRR|B Chain B, Substitution Of Manganese For Iron In Ribonucleotide
           Reductase From Escherichia Coli. Spectroscopic And
           Crystallographic Characterization
 gi|494553|pdb|1RIB|A Chain A, Structure And Function Of The Escherichia Coli
           Ribonucleotide Reductase Protein R2
 gi|494554|pdb|1RIB|B Chain B, Structure And Function Of The Escherichia Coli
           Ribonucleotide Reductase Protein R2
          Length = 375

 Score =  107 bits (268), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F    NP PW++  ++    +    E  V+ 
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 356 YLVGQIDSEVDTD 368


>gi|325919223|ref|ZP_08181270.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC
           19865]
 gi|325923021|ref|ZP_08184721.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC
           19865]
 gi|325546491|gb|EGD17645.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC
           19865]
 gi|325550297|gb|EGD21104.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC
           19865]
          Length = 347

 Score =  107 bits (268), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  EN  L   +           A  LE  +  E +  G  G++
Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWTAEVL-DGIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L++   +N  PW+    D   + + +FFE R   Y++
Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337


>gi|226327851|ref|ZP_03803369.1| hypothetical protein PROPEN_01732 [Proteus penneri ATCC 35198]
 gi|225203555|gb|EEG85909.1| hypothetical protein PROPEN_01732 [Proteus penneri ATCC 35198]
          Length = 376

 Score =  107 bits (268), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  EA   E  +A     +G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAEECEQECYDLFVEAAEQEKEWAEYLFSEGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  FK   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLKLPFKARSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +++  D
Sbjct: 357 YLVGQIDSQVDTD 369


>gi|42543283|pdb|1PIY|A Chain A, Ribonucleotide Reductase R2 Soaked With Ferrous Ion At
           Neutral Ph
 gi|42543284|pdb|1PIY|B Chain B, Ribonucleotide Reductase R2 Soaked With Ferrous Ion At
           Neutral Ph
 gi|42543506|pdb|1R65|A Chain A, Crystal Structure Of Ferrous Soaked Ribonucleotide
           Reductase R2 Subunit (Wildtype) At Ph 5 From E. Coli
 gi|42543507|pdb|1R65|B Chain B, Crystal Structure Of Ferrous Soaked Ribonucleotide
           Reductase R2 Subunit (Wildtype) At Ph 5 From E. Coli
          Length = 375

 Score =  107 bits (268), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F    NP PW++  ++    +    E  V+ 
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 356 YLVGQIDSEVDTD 368


>gi|113200701|ref|YP_717864.1| ribonucleotide reductase subunit B [Synechococcus phage syn9]
 gi|76574600|gb|ABA47165.1| ribonucleotide reductase subunit B [Synechococcus phage syn9]
          Length = 387

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVINQIKI-ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           RDE+ HL    +++N+ +  ++P +    KE +     M       E  +A      G  
Sbjct: 247 RDENQHLVITQNILNKWREGDDPEMAIIAKEEEVNVVDMFKRTVNEEKRWADYLFKDGSM 306

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEKNF-FETRVT 114
           +GLN      Y+++IANRR   IGL+P++      NP PW    ++ K ++N   ET + 
Sbjct: 307 IGLNDRLLHNYVEWIANRRMKAIGLKPIYDIPAKNNPLPWTEHWLNSKGQQNAPQETEIE 366

Query: 115 EYQQGA 120
            Y  G 
Sbjct: 367 SYVVGG 372


>gi|33358114|pdb|1PIM|A Chain A, Dithionite Reduced E. Coli Ribonucleotide Reductase R2
           Subunit, D84e Mutant
 gi|33358115|pdb|1PIM|B Chain B, Dithionite Reduced E. Coli Ribonucleotide Reductase R2
           Subunit, D84e Mutant
 gi|33358116|pdb|1PIU|A Chain A, Oxidized Ribonucleotide Reductase R2-D84e Mutant
           Containing Oxo-Bridged Diferric Cluster
 gi|33358117|pdb|1PIU|B Chain B, Oxidized Ribonucleotide Reductase R2-D84e Mutant
           Containing Oxo-Bridged Diferric Cluster
 gi|42543285|pdb|1PIZ|A Chain A, Ribonucleotide Reductase R2 D84e Mutant Soaked With
           Ferrous Ions At Neutral Ph
 gi|42543286|pdb|1PIZ|B Chain B, Ribonucleotide Reductase R2 D84e Mutant Soaked With
           Ferrous Ions At Neutral Ph
          Length = 375

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F    NP PW++  ++    +    E  V+ 
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 356 YLVGQIDSEVDTD 368


>gi|331653669|ref|ZP_08354670.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M718]
 gi|331048518|gb|EGI20594.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M718]
          Length = 449

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 310 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 369

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 370 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 429

Query: 116 Y 116
           Y
Sbjct: 430 Y 430


>gi|110806205|ref|YP_689725.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri 5 str. 8401]
 gi|110615753|gb|ABF04420.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           flexneri 5 str. 8401]
 gi|281601680|gb|ADA74664.1| putative ribonucleotide reductase, beta subunit [Shigella flexneri
           2002017]
          Length = 453

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 314 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 373

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 374 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 433

Query: 116 Y 116
           Y
Sbjct: 434 Y 434


>gi|42543287|pdb|1PJ0|A Chain A, Ribonucleotide Reductase R2-D84eW48F MUTANT SOAKED WITH
           Ferrous Ions At Neutral Ph
 gi|42543288|pdb|1PJ0|B Chain B, Ribonucleotide Reductase R2-D84eW48F MUTANT SOAKED WITH
           Ferrous Ions At Neutral Ph
 gi|42543289|pdb|1PJ1|A Chain A, Ribonucleotide Reductase R2-D84eW48F SOAKED WITH FERROUS
           Ions At Ph 5
 gi|42543290|pdb|1PJ1|B Chain B, Ribonucleotide Reductase R2-D84eW48F SOAKED WITH FERROUS
           Ions At Ph 5
          Length = 375

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F    NP PW++  ++    +    E  V+ 
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 356 YLVGQIDSEVDTD 368


>gi|325914792|ref|ZP_08177129.1| ribonucleotide reductase, beta subunit [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325538985|gb|EGD10644.1| ribonucleotide reductase, beta subunit [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 349

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  EN  L   +           A  LE  +  E +  G  G++
Sbjct: 221 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWTAEVL-DGIDGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L++   +N  PW+    D   + + +FFE R   Y++
Sbjct: 280 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 339


>gi|66770372|ref|YP_245134.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. campestris str. 8004]
 gi|188993572|ref|YP_001905582.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. campestris str. B100]
 gi|66575704|gb|AAY51114.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           campestris pv. campestris str. 8004]
 gi|167735332|emb|CAP53546.1| Ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           campestris pv. campestris]
          Length = 347

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  EN  L   +           A  LE  +  E +  G  G++
Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWTAEVL-DGIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L++   +N  PW+    D   + + +FFE R   Y++
Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337


>gi|37526941|ref|NP_930285.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|36786374|emb|CAE15427.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotide
           reductase 1) (B2 protein) (R2 protein) [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 376

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    KE +Q+   +  +A   E  +A     +G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAKECEQQCYDLFVQAAEQEKEWADYLFSEGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLKLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|54309624|ref|YP_130644.1| ribonucleotide-diphosphate reductase subunit beta [Photobacterium
           profundum SS9]
 gi|46914062|emb|CAG20842.1| putative ribonucleoside-diphosphate reductase,beta subunit
           [Photobacterium profundum SS9]
          Length = 377

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+   +  EA   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLLRGRHDDPEMADIAQECQQECFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101
            +GLN     QY+++I N R   +GLE  +    +NP PW++  + 
Sbjct: 297 MIGLNKEILCQYVEYITNLRMKAVGLEQAYPGANQNPIPWINSWLS 342


>gi|87120532|ref|ZP_01076426.1| ribonucleotide-diphosphate reductase beta subunit [Marinomonas sp.
           MED121]
 gi|86164175|gb|EAQ65446.1| ribonucleotide-diphosphate reductase beta subunit [Marinomonas sp.
           MED121]
          Length = 377

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    KE + ++  +  EA   E  +A      G 
Sbjct: 238 RDEALHLTGTQHILNLMASGKDDPEMEDIAKECEDEAYQIFFEAAEQEKEWASYLFKDGS 297

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLNA    QY+++I N R   IGL P F+   NP PW++  ++    +    E  ++ 
Sbjct: 298 MIGLNAQILGQYVEYITNIRMQAIGLLPTFETKHNPIPWINAWLVSDNVQVAPQEAEISS 357

Query: 116 Y 116
           Y
Sbjct: 358 Y 358


>gi|227328222|ref|ZP_03832246.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 376

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFQTRTNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQIDSEISDD 369


>gi|56412825|ref|YP_149900.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|197361758|ref|YP_002141394.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
 gi|56127082|gb|AAV76588.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|197093234|emb|CAR58679.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
          Length = 376

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQIDSEVDTD 369


>gi|326783480|ref|YP_004324017.1| ribonucleotide reductase A subunit [Synechococcus phage Syn19]
 gi|310004983|gb|ADO99373.1| ribonucleotide reductase A subunit [Synechococcus phage Syn19]
          Length = 388

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVINQIKI-ENPH--LWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           RDES HL    +++ +    ++P   L  +E Q     M       E A+A+     G  
Sbjct: 248 RDESQHLVITQNILRKWSEGDDPEMKLIAQEEQSYVTEMFKRTVEEEKAWANYLFRDGSL 307

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEKNF-FETRVT 114
           +GLN      Y+++IANRR   +G++P++      NP PW    ++ K ++N   ET + 
Sbjct: 308 IGLNDRLLYNYVEWIANRRMKAVGIKPIYDIPAKNNPLPWTEHWLNSKGQQNAPQETEIE 367

Query: 115 EYQQGA 120
            Y  G 
Sbjct: 368 SYVVGG 373


>gi|311278798|ref|YP_003941029.1| Ribonucleoside-diphosphate reductase [Enterobacter cloacae SCF1]
 gi|308747993|gb|ADO47745.1| Ribonucleoside-diphosphate reductase [Enterobacter cloacae SCF1]
          Length = 376

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|253687496|ref|YP_003016686.1| ribonucleotide reductase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251754074|gb|ACT12150.1| ribonucleotide reductase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 376

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFQTRTNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQIDSEISDD 369


>gi|21233407|ref|NP_639324.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
 gi|21115247|gb|AAM43206.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
          Length = 347

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  EN  L   +           A  LE  +  E +  G  G++
Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWTAEVL-DGIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L++   +N  PW+    D   + + +FFE R   Y++
Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337


>gi|109898789|ref|YP_662044.1| ribonucleotide-diphosphate reductase subunit beta
           [Pseudoalteromonas atlantica T6c]
 gi|109701070|gb|ABG40990.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Pseudoalteromonas atlantica T6c]
          Length = 376

 Score =  107 bits (267), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 5/105 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N      ++P +     E+++++  +  +A   E  +A      G 
Sbjct: 237 RDENLHLTSTQHILNLWAKGKDDPEMAEIALEYKEEATNIFLDAVNQEKEWAEYLFQNGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101
            +GLN     QY++FIAN R   IGL+  F    NP PWM+  ++
Sbjct: 297 MIGLNKDILCQYVEFIANHRMSAIGLDQPFDIKNNPLPWMNNYLN 341


>gi|227114436|ref|ZP_03828092.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 376

 Score =  107 bits (267), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFQTRTNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQIDSEISDD 369


>gi|94499220|ref|ZP_01305758.1| ribonucleotide-diphosphate reductase beta subunit [Oceanobacter sp.
           RED65]
 gi|94428852|gb|EAT13824.1| ribonucleotide-diphosphate reductase beta subunit [Oceanobacter sp.
           RED65]
          Length = 376

 Score =  107 bits (267), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 6/125 (4%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++    +  ++P +     E +++   +  EA   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMMQIWALGKDDPEMGEIANECKKQVIEIFREAAQQEKDWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N+R   IGL+ +F+  +NP PW++  ++    +    E  ++ 
Sbjct: 297 MIGLNKDILCQYVEYITNQRLGAIGLDNIFETRQNPIPWINAWLVSDNVQVAPQEAEISS 356

Query: 116 YQQGA 120
           Y  GA
Sbjct: 357 YLVGA 361


>gi|332306884|ref|YP_004434735.1| Ribonucleoside-diphosphate reductase [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332174213|gb|AEE23467.1| Ribonucleoside-diphosphate reductase [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 376

 Score =  107 bits (267), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 5/105 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N      ++P +     E++Q++  +  +A   E  +A      G 
Sbjct: 237 RDENLHLTSTQHILNLWAKGKDDPEMAEIAIEYKQQATDIFLDAVNQEKEWAEYLFQNGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101
            +GLN     QY++FIAN R   IGL   F    NP PWM+  ++
Sbjct: 297 MIGLNKDILCQYVEFIANHRMSAIGLGQPFDIKNNPLPWMNNYLN 341


>gi|261822457|ref|YP_003260563.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           wasabiae WPP163]
 gi|261606470|gb|ACX88956.1| ribonucleotide reductase [Pectobacterium wasabiae WPP163]
          Length = 376

 Score =  107 bits (267), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFQTRTNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQIDSEISDD 369


>gi|205353394|ref|YP_002227195.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|205273175|emb|CAR38137.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|326628485|gb|EGE34828.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 9]
          Length = 376

 Score =  107 bits (267), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQIDSEVDTD 369


>gi|89092731|ref|ZP_01165684.1| ribonucleotide-diphosphate reductase beta subunit [Oceanospirillum
           sp. MED92]
 gi|89083243|gb|EAR62462.1| ribonucleotide-diphosphate reductase beta subunit [Oceanospirillum
           sp. MED92]
          Length = 376

 Score =  107 bits (267), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P      KE +Q    +  EA   E  +A     +G 
Sbjct: 237 RDEALHLTGTQHMLNIMASGADDPDYKDIAKECEQDVYNIFKEAAQQEKDWAQYLFREGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLNA     Y+++I N R   + LE +F   +NP PWM+  ++    +    E  ++ 
Sbjct: 297 MIGLNAQILSDYVEYITNVRMKALNLEEIFPARQNPLPWMNAWLVSDNVQVAPQEAEISS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|326783875|ref|YP_004324269.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM7]
 gi|310003887|gb|ADO98282.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM7]
          Length = 388

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVI-NQIKIENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           RDE+ HL    +++ N +  ++P +     E +     M   A   E  +A      G  
Sbjct: 248 RDENQHLVLTQNILKNWMNGDDPEMKQIADEERNNVIGMFRNAVEEEKEWAEYLFSGGSM 307

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEKNF-FETRVT 114
           +GLN     QY+++IAN+R   +G +P++      NP PW    I  K  +    ET V 
Sbjct: 308 IGLNDKLLNQYVEWIANKRMKALGFDPIYDQPLRNNPLPWTQHWISSKGLQVAPQETEVE 367

Query: 115 EYQQGA 120
            Y  G 
Sbjct: 368 SYVVGG 373


>gi|16765605|ref|NP_461220.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|62180851|ref|YP_217268.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161613001|ref|YP_001586966.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Paratyphi B str. SPB7]
 gi|167549728|ref|ZP_02343487.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|167992612|ref|ZP_02573709.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|168237293|ref|ZP_02662351.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|168242393|ref|ZP_02667325.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168261709|ref|ZP_02683682.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|168466025|ref|ZP_02699895.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|168817991|ref|ZP_02829991.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|194442577|ref|YP_002041539.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194449379|ref|YP_002046332.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194735273|ref|YP_002115349.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197247637|ref|YP_002147234.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197262505|ref|ZP_03162579.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|198242288|ref|YP_002216347.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|200387602|ref|ZP_03214214.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204929071|ref|ZP_03220214.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|207857697|ref|YP_002244348.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|213161593|ref|ZP_03347303.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|224583238|ref|YP_002637036.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|1172945|sp|P37427|RIR2_SALTY RecName: Full=Ribonucleoside-diphosphate reductase 1 subunit beta;
           AltName: Full=Protein B2; AltName: Full=Protein R2;
           AltName: Full=Ribonucleotide reductase 1
 gi|510349|emb|CAA51453.1| nrdB [Salmonella enterica subsp. enterica serovar Typhimurium]
 gi|16420817|gb|AAL21179.1| ribonucleoside-diphosphate reductase 1, beta subunit [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|62128484|gb|AAX66187.1| ribonucleoside-diphosphate reductase 1, beta subunit [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161362365|gb|ABX66133.1| hypothetical protein SPAB_00707 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401240|gb|ACF61462.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194407683|gb|ACF67902.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194710775|gb|ACF89996.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|195631367|gb|EDX49927.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|197211340|gb|ACH48737.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197240760|gb|EDY23380.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197289678|gb|EDY29041.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|197936804|gb|ACH74137.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|199604700|gb|EDZ03245.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204321615|gb|EDZ06814.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205325266|gb|EDZ13105.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205329222|gb|EDZ15986.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|205338588|gb|EDZ25352.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|205344845|gb|EDZ31609.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|205349363|gb|EDZ35994.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|206709500|emb|CAR33844.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|224467765|gb|ACN45595.1| ribonucleotide-diphosphate reductase beta subunit [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|261247486|emb|CBG25313.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267994368|gb|ACY89253.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           14028S]
 gi|301158836|emb|CBW18349.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
 gi|312913268|dbj|BAJ37242.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|320086715|emb|CBY96487.1| ribonucleoside diphosphage reductase 1, beta subunit, B2
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
 gi|321223022|gb|EFX48093.1| Ribonucleotide reductase of class Ia aerobic, beta subunit
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
 gi|322617030|gb|EFY13936.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315996572]
 gi|322617664|gb|EFY14563.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-1]
 gi|322624706|gb|EFY21535.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-3]
 gi|322630255|gb|EFY27025.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-4]
 gi|322634436|gb|EFY31169.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-1]
 gi|322639146|gb|EFY35838.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-2]
 gi|322640143|gb|EFY36809.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 531954]
 gi|322645769|gb|EFY42293.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322651544|gb|EFY47919.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           OH_2009072675]
 gi|322656105|gb|EFY52404.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322659457|gb|EFY55704.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 19N]
 gi|322665919|gb|EFY62102.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           81038-01]
 gi|322669843|gb|EFY65984.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MD_MDA09249507]
 gi|322673828|gb|EFY69925.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 414877]
 gi|322678586|gb|EFY74642.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 366867]
 gi|322683618|gb|EFY79632.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 413180]
 gi|322687694|gb|EFY83664.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 446600]
 gi|322715327|gb|EFZ06898.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Choleraesuis str. A50]
 gi|323130608|gb|ADX18038.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str. 4/74]
 gi|323196209|gb|EFZ81366.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           609458-1]
 gi|323198377|gb|EFZ83479.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           556150-1]
 gi|323204185|gb|EFZ89196.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 609460]
 gi|323208571|gb|EFZ93510.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           507440-20]
 gi|323212337|gb|EFZ97160.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 556152]
 gi|323218256|gb|EGA02966.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB101509-0077]
 gi|323222986|gb|EGA07335.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB102109-0047]
 gi|323227421|gb|EGA11586.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB110209-0055]
 gi|323232251|gb|EGA16354.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB111609-0052]
 gi|323235716|gb|EGA19800.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009083312]
 gi|323241124|gb|EGA25160.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009085258]
 gi|323244866|gb|EGA28868.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315731156]
 gi|323248577|gb|EGA32508.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2009159199]
 gi|323251597|gb|EGA35465.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008282]
 gi|323255474|gb|EGA39237.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008283]
 gi|323263076|gb|EGA46622.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008284]
 gi|323268136|gb|EGA51613.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008285]
 gi|323270771|gb|EGA54209.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008287]
 gi|326624097|gb|EGE30442.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
 gi|332989211|gb|AEF08194.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str. UK-1]
          Length = 376

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQIDSEVDTD 369


>gi|227356095|ref|ZP_03840485.1| ribonucleoside-diphosphate reductase 1, beta subunit [Proteus
           mirabilis ATCC 29906]
 gi|227163740|gb|EEI48652.1| ribonucleoside-diphosphate reductase 1, beta subunit [Proteus
           mirabilis ATCC 29906]
          Length = 376

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E +Q+   +  EA   E  +A     +G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEQECYDLFVEAAEQEKEWAEYLFSEGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  FK   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLKLPFKARSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +++  D
Sbjct: 357 YLVGQIDSQVDTD 369


>gi|168229641|ref|ZP_02654699.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|194471700|ref|ZP_03077684.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|238913487|ref|ZP_04657324.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Tennessee str.
           CDC07-0191]
 gi|194458064|gb|EDX46903.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|205335835|gb|EDZ22599.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
          Length = 376

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQIDSEVDTD 369


>gi|326782198|ref|YP_004322599.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM1]
 gi|310004405|gb|ADO98798.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM1]
          Length = 395

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLW---TKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           RDES HL     +I + +  +        +E +     M   A   E A+A      G  
Sbjct: 255 RDESQHLVLTQQIIKKWQDGDDEEMVRIAEEEKSNVLKMFKNAVEEEKAWASYLFKNGSM 314

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE--NPFPWMSEVIDLKKEKNF-FETRVT 114
           +GLN     QY++F ANRR   IGL+P++  +   NP PW    ++ K ++N   ET + 
Sbjct: 315 IGLNEKLLGQYVEFTANRRMKAIGLDPIYDISPRNNPLPWTQYWLNSKGQQNAPQETEIE 374

Query: 115 EYQQGA 120
            Y  G 
Sbjct: 375 SYVIGG 380


>gi|326783148|ref|YP_004323545.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM2]
 gi|310005566|gb|ADO99954.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM2]
          Length = 394

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLW---TKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           RDES HL     +I + +  +        +E +     M   A   E A+A      G  
Sbjct: 254 RDESQHLVLTQQIIKKWQDGDDEEMVRIAEEEKPNVLKMFQNAVEEEKAWAQYLFKNGSM 313

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE--NPFPWMSEVIDLKKEKNF-FETRVT 114
           +GLN     QY++F ANRR   IGL+P++  +   NP PW    ++ K ++N   ET + 
Sbjct: 314 IGLNEKLLGQYVEFTANRRMKAIGLDPIYDISPRNNPLPWTQYWLNSKGQQNAPQETEIE 373

Query: 115 EYQQGA 120
            Y  G 
Sbjct: 374 SYVIGG 379


>gi|213646443|ref|ZP_03376496.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. J185]
 gi|289824706|ref|ZP_06544205.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
          Length = 240

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 101 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 160

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 161 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 220

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 221 YLVGQIDSEVDTD 233


>gi|16761204|ref|NP_456821.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. CT18]
 gi|29141101|ref|NP_804443.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|25285831|pir||AD0791 ribonucleoside-diphosphate reductase (EC 1.17.4.1) - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16503503|emb|CAD07510.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Typhi]
 gi|29136727|gb|AAO68292.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
          Length = 376

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQIDSEVDTD 369


>gi|324020907|gb|EGB90126.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 117-3]
          Length = 420

 Score =  106 bits (266), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 281 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 340

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 341 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 400

Query: 116 Y 116
           Y
Sbjct: 401 Y 401


>gi|152997008|ref|YP_001341843.1| ribonucleotide-diphosphate reductase subunit beta [Marinomonas sp.
           MWYL1]
 gi|150837932|gb|ABR71908.1| Ribonucleoside-diphosphate reductase [Marinomonas sp. MWYL1]
          Length = 377

 Score =  106 bits (266), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +     E Q + R +  EA   E  +A      G 
Sbjct: 238 RDEALHLTGTQHMLNLMASGKDDPEMAVIAAECQDEVRQIFIEAAEQEKEWATYLFKDGS 297

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLNA    QY+++I N R   +GLE  F    NP PW++  ++    +    E  ++ 
Sbjct: 298 MIGLNAQILGQYVEYITNVRMQAVGLETCFATKHNPIPWINAWLVSDNVQVAPQEAEISS 357

Query: 116 Y 116
           Y
Sbjct: 358 Y 358


>gi|197285594|ref|YP_002151466.1| ribonucleotide-diphosphate reductase subunit beta [Proteus
           mirabilis HI4320]
 gi|194683081|emb|CAR43612.1| ribonucleoside-diphosphate reductase 1, beta subunit [Proteus
           mirabilis HI4320]
          Length = 376

 Score =  106 bits (266), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E +Q+   +  EA   E  +A     +G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEQECYDLFVEAAEQEKEWAEYLFSEGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  FK   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLKLPFKARSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +++  D
Sbjct: 357 YLVGQIDSQVDTD 369


>gi|290508492|ref|ZP_06547863.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella sp.
           1_1_55]
 gi|289777886|gb|EFD85883.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella sp.
           1_1_55]
          Length = 405

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +   A   E  +A      G 
Sbjct: 266 RDEALHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVLAAQQEKEWADYLFRDGS 325

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 326 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 385

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 386 YLVGQIDSEVDAD 398


>gi|90581239|ref|ZP_01237037.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio angustum
           S14]
 gi|90437610|gb|EAS62803.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio angustum
           S14]
          Length = 377

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E +Q+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLLRNGHDDPEMAEIAAECEQECFDIFKAAAEQEKEWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL P +   T+NP PW++  + 
Sbjct: 297 MIGLNKQILCQYVEYITNLRMVAVGLRPAYDGATQNPIPWINSWLS 342


>gi|260772919|ref|ZP_05881835.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           metschnikovii CIP 69.14]
 gi|260612058|gb|EEX37261.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           metschnikovii CIP 69.14]
          Length = 377

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++            +E +Q+   +  EA   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMINLLRNGLDDFTFLQIAEECKQQCFDLFKEAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID 101
            +GLN     QY+++I N R   +GLEP +   T NP PW++  + 
Sbjct: 297 MIGLNRDILCQYVEYITNIRMQAVGLEPAYPKATSNPIPWINAWLS 342


>gi|326782458|ref|YP_004322858.1| ribonucleotide reductase A subunit [Synechococcus phage S-ShM2]
 gi|310003406|gb|ADO97803.1| ribonucleotide reductase A subunit [Synechococcus phage S-ShM2]
          Length = 386

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVINQIKI-ENPHLWTKEFQQK--SRTMLHEATLLEIAYAHETMPKG-F 57
           RDES HL    +++   +  ++P +     +++     M  +    E A+A      G  
Sbjct: 246 RDESQHLVITQNILKNWRDGDDPEMQQIALEEEENVIKMFAKTVDEEKAWAEYLFKDGSM 305

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114
           +GLN     QY+++IANRR   IGL+P++      NP PW    ++ K ++N   ET + 
Sbjct: 306 IGLNDRLLSQYVEWIANRRMKAIGLKPMYNVPAKSNPLPWTEHWLNSKGQQNAPQETEIE 365

Query: 115 EYQQGA 120
            Y  G 
Sbjct: 366 SYVIGG 371


>gi|238895770|ref|YP_002920506.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella
           pneumoniae NTUH-K2044]
 gi|238548088|dbj|BAH64439.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 396

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +   A   E  +A      G 
Sbjct: 257 RDEALHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVLAAQQEKEWADYLFRDGS 316

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 317 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 376

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 377 YLVGQIDSEVDAD 389


>gi|170019452|ref|YP_001724406.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           ATCC 8739]
 gi|187775748|ref|ZP_02798054.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4196]
 gi|188024880|ref|ZP_02774660.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4113]
 gi|189010171|ref|ZP_02805091.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4076]
 gi|189402101|ref|ZP_02779989.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4401]
 gi|189403050|ref|ZP_02792862.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4486]
 gi|189404930|ref|ZP_02812148.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC869]
 gi|189405663|ref|ZP_02823406.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC508]
 gi|208806716|ref|ZP_03249053.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4206]
 gi|208812585|ref|ZP_03253914.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4045]
 gi|208820390|ref|ZP_03260710.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4042]
 gi|209398142|ref|YP_002271641.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4115]
 gi|293415528|ref|ZP_06658171.1| ribonucleoside-diphosphate reductase [Escherichia coli B185]
 gi|300948933|ref|ZP_07162994.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 116-1]
 gi|300958921|ref|ZP_07171024.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 175-1]
 gi|307138893|ref|ZP_07498249.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           H736]
 gi|169754380|gb|ACA77079.1| Ribonucleoside-diphosphate reductase [Escherichia coli ATCC 8739]
 gi|187771218|gb|EDU35062.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4196]
 gi|188016038|gb|EDU54160.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4113]
 gi|189002108|gb|EDU71094.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4076]
 gi|189357709|gb|EDU76128.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4401]
 gi|189362845|gb|EDU81264.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4486]
 gi|189372811|gb|EDU91227.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC869]
 gi|189378868|gb|EDU97284.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC508]
 gi|208726517|gb|EDZ76118.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4206]
 gi|208733862|gb|EDZ82549.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4045]
 gi|208740513|gb|EDZ88195.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4042]
 gi|209159542|gb|ACI36975.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4115]
 gi|291433176|gb|EFF06155.1| ribonucleoside-diphosphate reductase [Escherichia coli B185]
 gi|300314424|gb|EFJ64208.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 175-1]
 gi|300451587|gb|EFK15207.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 116-1]
 gi|315136867|dbj|BAJ44026.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           DH1]
 gi|320192144|gb|EFW66789.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. EC1212]
 gi|320641061|gb|EFX10540.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. G5101]
 gi|320646450|gb|EFX15369.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H- str. 493-89]
 gi|320651547|gb|EFX19927.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H- str. H 2687]
 gi|320657299|gb|EFX25101.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O55:H7 str. 3256-97 TW 07815]
 gi|320667818|gb|EFX34726.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. LSU-61]
 gi|323936632|gb|EGB32918.1| ribonucleotide reductase [Escherichia coli E1520]
 gi|323941071|gb|EGB37258.1| ribonucleotide reductase [Escherichia coli E482]
 gi|326344044|gb|EGD67805.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. 1044]
          Length = 389

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 369

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 370 YLVGQIDSEVDTD 382


>gi|332278613|ref|ZP_08391026.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9]
 gi|332100965|gb|EGJ04311.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9]
          Length = 420

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 281 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 340

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 341 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 400

Query: 116 Y 116
           Y
Sbjct: 401 Y 401


>gi|307171465|gb|EFN63309.1| Ribonucleoside-diphosphate reductase subunit M2 [Camponotus
           floridanus]
          Length = 343

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 41/84 (48%), Gaps = 7/84 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  K   ++ ++++ +A  +E  +  + +P   +G+N
Sbjct: 243 RDEGLHCDFACLMFK-------HIVQKPSFERVKSIIMDAVEIEQEFLTQALPVQLIGMN 295

Query: 62  APSCEQYMQFIANRRCHQIGLEPL 85
                 Y++F+A+R    +G E +
Sbjct: 296 CTLMCSYIEFVADRLFVALGFEKV 319


>gi|118602534|ref|YP_903749.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Ruthia magnifica str. Cm (Calyptogena magnifica)]
 gi|118567473|gb|ABL02278.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Candidatus Ruthia magnifica str. Cm (Calyptogena
           magnifica)]
          Length = 378

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 6/125 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +      L     +KE Q +  TM  EA   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMSSGKDDLDMQKISKECQDEVITMFREACEQEKDWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
            +GLNA   +QY+++I N R   + L  +F    NP PW++  +D    +    ET +T 
Sbjct: 297 MIGLNAQILKQYLEYITNVRMKALNLSLIFDECTNPLPWINHWLDSDNVQVAPQETEITS 356

Query: 116 YQQGA 120
           Y   A
Sbjct: 357 YLVSA 361


>gi|324112772|gb|EGC06748.1| ribonucleotide reductase [Escherichia fergusonii B253]
          Length = 389

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 369

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 370 YLVGQIDSEVDTD 382


>gi|330829606|ref|YP_004392558.1| ribonucleoside diphosphate reductase 1 subunit beta, ferritin-like
           protein [Aeromonas veronii B565]
 gi|328804742|gb|AEB49941.1| Ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Aeromonas veronii B565]
          Length = 393

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 7/122 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E +Q    +  EA + E  +A      G 
Sbjct: 253 RDEALHLTGTQHMLNLMRTGQDDPEMAEIAAECEQACFEIFKEAAIQEKEWAEYLFQDGS 312

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS-EVIDLKKEKNFFETRVT 114
            +GLN     QY+++I N R   +GL+P F  T+ NP PW++  +     +    E  V+
Sbjct: 313 MIGLNKDILCQYVEYITNLRMSAVGLQPAFAGTKQNPIPWINTWLSSDNVQVAPQEVEVS 372

Query: 115 EY 116
            Y
Sbjct: 373 SY 374


>gi|291283479|ref|YP_003500297.1| Ribonucleoside-diphosphate reductase 1, beta subunit, B2
           [Escherichia coli O55:H7 str. CB9615]
 gi|290763352|gb|ADD57313.1| Ribonucleoside-diphosphate reductase 1, beta subunit, B2
           [Escherichia coli O55:H7 str. CB9615]
          Length = 389

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 369

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 370 YLVGQIDSEVDTD 382


>gi|268591162|ref|ZP_06125383.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rettgeri DSM 1131]
 gi|291313388|gb|EFE53841.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rettgeri DSM 1131]
          Length = 378

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E +Q+   +  +A   E  +A     +G 
Sbjct: 239 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEQECYDLFVQAAEQEKEWADYLFSEGS 298

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 299 MIGLNKDILCQYVEYITNIRMQAVGLKLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 358

Query: 116 Y---QQGAELKWD 125
           Y   Q  +++  D
Sbjct: 359 YLVGQIDSQVDTD 371


>gi|304414248|ref|ZP_07395616.1| ribonucleotide reductase beta subunit [Candidatus Regiella
           insecticola LSR1]
 gi|304283462|gb|EFL91858.1| ribonucleotide reductase beta subunit [Candidatus Regiella
           insecticola LSR1]
          Length = 381

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 5/105 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++   ++P +    KE Q     +  +A   E  +A      G 
Sbjct: 242 RDEALHLTGTQHIINLMREGTDDPEMAEIAKECQNNCFELFKKAAEQEKEWATYLFRDGS 301

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   FK   NP PW++  + 
Sbjct: 302 MIGLNKDILCQYIEYITNIRMQAVGLALPFKIRSNPIPWINAWLS 346


>gi|189403970|ref|ZP_02786340.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4501]
 gi|217327202|ref|ZP_03443285.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. TW14588]
 gi|301026864|ref|ZP_07190263.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 196-1]
 gi|301647674|ref|ZP_07247468.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 146-1]
 gi|189368305|gb|EDU86721.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4501]
 gi|217319569|gb|EEC27994.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. TW14588]
 gi|260448673|gb|ACX39095.1| Ribonucleoside-diphosphate reductase [Escherichia coli DH1]
 gi|299879524|gb|EFI87735.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 196-1]
 gi|301074204|gb|EFK89010.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 146-1]
 gi|326339582|gb|EGD63393.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. 1125]
          Length = 393

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 254 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 313

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 314 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 373

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 374 YLVGQIDSEVDTD 386


>gi|40889712|pdb|1RSR|A Chain A, Azide Complex Of The Diferrous F208a Mutant R2 Subunit Of
           Ribonucleotide Reductase
 gi|40889713|pdb|1RSR|B Chain B, Azide Complex Of The Diferrous F208a Mutant R2 Subunit Of
           Ribonucleotide Reductase
          Length = 375

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 356 YLVGQIDSEVDTD 368


>gi|304445703|pdb|2XOF|A Chain A, Ribonucleotide Reductase Y122no2y Modified R2 Subunit Of
           E. Coli
 gi|304445704|pdb|2XOF|B Chain B, Ribonucleotide Reductase Y122no2y Modified R2 Subunit Of
           E. Coli
          Length = 375

 Score =  105 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 356 YLVGQIDSEVDTD 368


>gi|93005945|ref|YP_580382.1| ribonucleotide-diphosphate reductase subunit beta [Psychrobacter
           cryohalolentis K5]
 gi|92393623|gb|ABE74898.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Psychrobacter cryohalolentis K5]
          Length = 377

 Score =  105 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 7/122 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++I  ++P +    KE  ++S  +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLMRIGRDDPEMVDIAKECYEESIEIFRKAAEQEKEWAGYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS-EVIDLKKEKNFFETRVT 114
            +GLN     QY+++I N R   +GL   F  ++ NP PW++  +     +    ET ++
Sbjct: 297 MIGLNKDILCQYIEYITNLRMEAVGLPVAFPNSKSNPIPWINTWLSSDNVQVAPQETEIS 356

Query: 115 EY 116
            Y
Sbjct: 357 SY 358


>gi|61680624|pdb|1YFD|A Chain A, Crystal Structure Of The Y122h Mutant Of Ribonucleotide
           Reductase R2 Protein From E. Coli
 gi|61680625|pdb|1YFD|B Chain B, Crystal Structure Of The Y122h Mutant Of Ribonucleotide
           Reductase R2 Protein From E. Coli
          Length = 375

 Score =  105 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 356 YLVGQIDSEVDTD 368


>gi|331663742|ref|ZP_08364652.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA143]
 gi|323977567|gb|EGB72653.1| ribonucleotide reductase [Escherichia coli TW10509]
 gi|331059541|gb|EGI31518.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA143]
          Length = 389

 Score =  105 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 369

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 370 YLVGQIDSEVDTD 382


>gi|326567429|gb|EGE17544.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis BC1]
          Length = 361

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 5/122 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FV 58
           RDE+LHLN    ++  +  E+      T+  + +   +   A   E A+       G  +
Sbjct: 225 RDEALHLNGTQHILTLLVKEHEDYQTITQTCKDEIYDIFESAYEQERAWIDYLFKDGSMI 284

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTEYQ 117
           GLN     QY+Q+I + R   IGLEP+F  T+NP PW++  +     +    ET +T Y 
Sbjct: 285 GLNKEILTQYLQYITDIRMSAIGLEPVFN-TKNPIPWINNWLSSDNVQVAPQETEITSYV 343

Query: 118 QG 119
            G
Sbjct: 344 VG 345


>gi|1942079|pdb|1XIK|A Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain
 gi|1942080|pdb|1XIK|B Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain
 gi|15825694|pdb|1JPR|A Chain A, Mn Substituted Ribonucleotide Reductase R2 From E. Coli
           Oxidized By Nitric Oxide
 gi|15825695|pdb|1JPR|B Chain B, Mn Substituted Ribonucleotide Reductase R2 From E. Coli
           Oxidized By Nitric Oxide
 gi|15826771|pdb|1JQC|A Chain A, Mn Substituted Ribonucleotide Reductase R2 From E. Coli
           Oxidized By Hydrogen Peroxide And Hydroxylamine
 gi|15826772|pdb|1JQC|B Chain B, Mn Substituted Ribonucleotide Reductase R2 From E. Coli
           Oxidized By Hydrogen Peroxide And Hydroxylamine
 gi|29726528|pdb|1MXR|A Chain A, High Resolution Structure Of Ribonucleotide Reductase R2
           From E. Coli In Its Oxidised (Met) Form
 gi|29726529|pdb|1MXR|B Chain B, High Resolution Structure Of Ribonucleotide Reductase R2
           From E. Coli In Its Oxidised (Met) Form
          Length = 375

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 356 YLVGQIDSEVDTD 368


>gi|326564074|gb|EGE14316.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 103P14B1]
 gi|326570555|gb|EGE20595.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis BC8]
 gi|326573198|gb|EGE23167.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis CO72]
          Length = 361

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 5/122 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FV 58
           RDE+LHLN    ++  +  E+      T+  + +   +   A   E A+       G  +
Sbjct: 225 RDEALHLNGTQHILTLLVKEHEDYQTITQTCKDEIYDIFESAYEQERAWIDYLFKDGSMI 284

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTEYQ 117
           GLN     QY+Q+I + R   IGLEP+F  T+NP PW++  +     +    ET +T Y 
Sbjct: 285 GLNKEILTQYLQYITDIRMSAIGLEPVFN-TKNPIPWINNWLSSDNVQVAPQETEITSYV 343

Query: 118 QG 119
            G
Sbjct: 344 VG 345


>gi|300897697|ref|ZP_07116095.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 198-1]
 gi|301022393|ref|ZP_07186277.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 69-1]
 gi|331683911|ref|ZP_08384507.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H299]
 gi|300358575|gb|EFJ74445.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 198-1]
 gi|300397543|gb|EFJ81081.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 69-1]
 gi|323967677|gb|EGB63089.1| ribonucleotide reductase [Escherichia coli M863]
 gi|331078863|gb|EGI50065.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H299]
          Length = 393

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 254 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 313

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 314 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 373

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 374 YLVGQIDSEVDTD 386


>gi|161617990|ref|YP_001595470.1| ribonucleotide reductase beta subunit [Enterobacteria phage
           phiEcoM-GJ1]
 gi|150416409|gb|ABR68787.1| ribonucleotide reductase beta subunit [Enterobacteria phage
           phiEcoM-GJ1]
          Length = 372

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 5/105 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +     E +Q+ + +  +A   E  +A      G 
Sbjct: 233 RDEALHLTGTQHMLNLLASGKDDPEMGEIAAECRQECQKLFEDAAQQEKDWADYLFKDGS 292

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101
            +GLN      Y+++I N R   +GL+  FK   NP PW++  ++
Sbjct: 293 MIGLNKQILCGYVEYITNIRMQAVGLDAPFKGATNPIPWINAWLN 337


>gi|320175005|gb|EFW50120.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           dysenteriae CDC 74-1112]
          Length = 376

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQIDSEVDTD 369


>gi|157144813|ref|YP_001452132.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter
           koseri ATCC BAA-895]
 gi|157082018|gb|ABV11696.1| hypothetical protein CKO_00540 [Citrobacter koseri ATCC BAA-895]
          Length = 376

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  I++P +    +E +Q    +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGIDDPEMAEIAEESKQACYDLFVQAAQQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GLE  F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLELPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQIDSEVDTD 369


>gi|15802782|ref|NP_288809.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 EDL933]
 gi|15832372|ref|NP_311145.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. Sakai]
 gi|16130170|ref|NP_416738.1| ribonucleoside-diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. MG1655]
 gi|82544520|ref|YP_408467.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
           Sb227]
 gi|82777644|ref|YP_403993.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           dysenteriae Sd197]
 gi|89109052|ref|AP_002832.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli str. K-12 substr. W3110]
 gi|157161718|ref|YP_001459036.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           HS]
 gi|170081853|ref|YP_001731173.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. DH10B]
 gi|187731010|ref|YP_001881065.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
           CDC 3083-94]
 gi|188495860|ref|ZP_03003130.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 53638]
 gi|195935609|ref|ZP_03080991.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. EC4024]
 gi|218548311|ref|YP_002382102.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia
           fergusonii ATCC 35469]
 gi|218705765|ref|YP_002413284.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           UMN026]
 gi|238901409|ref|YP_002927205.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli BW2952]
 gi|254794126|ref|YP_003078963.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. TW14359]
 gi|256022083|ref|ZP_05435948.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           4_1_40B]
 gi|261223312|ref|ZP_05937593.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261259138|ref|ZP_05951671.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. FRIK966]
 gi|293405702|ref|ZP_06649694.1| nrdB [Escherichia coli FVEC1412]
 gi|293410599|ref|ZP_06654175.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
 gi|298381383|ref|ZP_06990982.1| nrdB [Escherichia coli FVEC1302]
 gi|309785072|ref|ZP_07679705.1| ribonucleoside-diphosphate reductase 1, subunit beta [Shigella
           dysenteriae 1617]
 gi|312973510|ref|ZP_07787682.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 1827-70]
 gi|57014104|sp|P69924|RIR2_ECOLI RecName: Full=Ribonucleoside-diphosphate reductase 1 subunit beta;
           AltName: Full=Protein B2; AltName: Full=Protein R2;
           AltName: Full=Ribonucleotide reductase 1
 gi|57014105|sp|P69925|RIR2_ECO57 RecName: Full=Ribonucleoside-diphosphate reductase 1 subunit beta;
           AltName: Full=Protein B2; AltName: Full=Protein R2;
           AltName: Full=Ribonucleotide reductase 1
 gi|12516573|gb|AAG57364.1|AE005456_1 ribonucleoside diphosphage reductase 1, beta subunit, B2
           [Escherichia coli O157:H7 str. EDL933]
 gi|146967|gb|AAA24224.1| ribonucleoside diphosphate reductase B2 subunit precursor
           [Escherichia coli]
 gi|1788567|gb|AAC75295.1| ribonucleoside-diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. MG1655]
 gi|1799582|dbj|BAA16054.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli str. K12 substr. W3110]
 gi|13362587|dbj|BAB36541.1| ribonucleoside-diphosphate reductase 1 beta subunit [Escherichia
           coli O157:H7 str. Sakai]
 gi|81241792|gb|ABB62502.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           dysenteriae Sd197]
 gi|81245931|gb|ABB66639.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           boydii Sb227]
 gi|157067398|gb|ABV06653.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli HS]
 gi|169889688|gb|ACB03395.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. DH10B]
 gi|187428002|gb|ACD07276.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella boydii
           CDC 3083-94]
 gi|188491059|gb|EDU66162.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 53638]
 gi|218355852|emb|CAQ88465.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia fergusonii ATCC 35469]
 gi|218432862|emb|CAR13756.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli UMN026]
 gi|238863475|gb|ACR65473.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli BW2952]
 gi|254593526|gb|ACT72887.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli O157:H7 str. TW14359]
 gi|284922226|emb|CBG35308.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
           042]
 gi|291427910|gb|EFF00937.1| nrdB [Escherichia coli FVEC1412]
 gi|291471067|gb|EFF13551.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
 gi|298278825|gb|EFI20339.1| nrdB [Escherichia coli FVEC1302]
 gi|308927442|gb|EFP72916.1| ribonucleoside-diphosphate reductase 1, subunit beta [Shigella
           dysenteriae 1617]
 gi|309702545|emb|CBJ01872.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
           ETEC H10407]
 gi|310332105|gb|EFP99340.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 1827-70]
 gi|315615496|gb|EFU96128.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 3431]
 gi|320184866|gb|EFW59654.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri CDC 796-83]
 gi|320663001|gb|EFX30318.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O55:H7 str. USDA 5905]
 gi|327252504|gb|EGE64163.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli STEC_7v]
 gi|332094036|gb|EGI99088.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           boydii 3594-74]
 gi|332344015|gb|AEE57349.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli UMNK88]
          Length = 376

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQIDSEVDTD 369


>gi|317048919|ref|YP_004116567.1| ribonucleoside-diphosphate reductase [Pantoea sp. At-9b]
 gi|316950536|gb|ADU70011.1| Ribonucleoside-diphosphate reductase [Pantoea sp. At-9b]
          Length = 376

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E + +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRTGEDDPEMKEIAAECRDECYDLFKKAAEQEKEWAEYLFSGGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW+ S ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLDLPFQTRSNPIPWINSWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|117624429|ref|YP_853342.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           APEC O1]
 gi|237704711|ref|ZP_04535192.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           3_2_53FAA]
 gi|115513553|gb|ABJ01628.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
           APEC O1]
 gi|226901077|gb|EEH87336.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           3_2_53FAA]
 gi|323952030|gb|EGB47904.1| ribonucleotide reductase [Escherichia coli H252]
 gi|323956004|gb|EGB51757.1| ribonucleotide reductase [Escherichia coli H263]
          Length = 420

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 281 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 340

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 341 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 400

Query: 116 Y 116
           Y
Sbjct: 401 Y 401


>gi|193068232|ref|ZP_03049196.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E110019]
 gi|300903617|ref|ZP_07121535.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 84-1]
 gi|300926340|ref|ZP_07142140.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 182-1]
 gi|301328725|ref|ZP_07221778.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 78-1]
 gi|30041924|gb|AAP17650.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           flexneri 2a str. 2457T]
 gi|56383622|gb|AAN43832.2| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           flexneri 2a str. 301]
 gi|192958511|gb|EDV88950.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E110019]
 gi|300404353|gb|EFJ87891.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 84-1]
 gi|300417617|gb|EFK00928.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 182-1]
 gi|300844873|gb|EFK72633.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 78-1]
 gi|315255170|gb|EFU35138.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 85-1]
          Length = 389

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 369

Query: 116 Y 116
           Y
Sbjct: 370 Y 370


>gi|71065825|ref|YP_264552.1| ribonucleotide-diphosphate reductase subunit beta [Psychrobacter
           arcticus 273-4]
 gi|71038810|gb|AAZ19118.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Psychrobacter arcticus 273-4]
          Length = 377

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 7/122 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++I  ++P +    KE  ++S  +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLMRIGRDDPEMVDIAKECYEESIEIFRKAAEQEKEWAGYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS-EVIDLKKEKNFFETRVT 114
            +GLN     QY+++I N R   +GL   F  ++ NP PW++  +     +    ET ++
Sbjct: 297 MIGLNKDILCQYIEYITNLRMEAVGLPVAFPKSKSNPIPWINTWLSSDNVQVAPQETEIS 356

Query: 115 EY 116
            Y
Sbjct: 357 SY 358


>gi|300936793|ref|ZP_07151685.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 21-1]
 gi|300458078|gb|EFK21571.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 21-1]
          Length = 405

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 266 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 325

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 326 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 385

Query: 116 Y 116
           Y
Sbjct: 386 Y 386


>gi|145298925|ref|YP_001141766.1| ribonucleotide-diphosphate reductase subunit beta [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142851697|gb|ABO90018.1| ribonucleoside-diphosphate reductase, beta subunit [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 377

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 7/122 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +   + E +Q    +  EA + E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRTGQDDPEMAEISAECEQACFEIFKEAAIQEKEWAEYLFQDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS-EVIDLKKEKNFFETRVT 114
            +GLN     QY+++I N R + +GL+P F   + NP PW++  +     +    E  V+
Sbjct: 297 MIGLNKDILCQYVEYITNLRMNAVGLQPAFAGAKQNPIPWINTWLSSDNVQVAPQEVEVS 356

Query: 115 EY 116
            Y
Sbjct: 357 SY 358


>gi|194427189|ref|ZP_03059740.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B171]
 gi|194436109|ref|ZP_03068211.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 101-1]
 gi|300918603|ref|ZP_07135191.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 115-1]
 gi|300931418|ref|ZP_07146747.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 187-1]
 gi|301303305|ref|ZP_07209430.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 124-1]
 gi|194414810|gb|EDX31081.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B171]
 gi|194424837|gb|EDX40822.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 101-1]
 gi|300414255|gb|EFJ97565.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 115-1]
 gi|300460788|gb|EFK24281.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 187-1]
 gi|300841479|gb|EFK69239.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 124-1]
 gi|323961541|gb|EGB57149.1| ribonucleotide reductase [Escherichia coli H489]
 gi|323973062|gb|EGB68256.1| ribonucleotide reductase [Escherichia coli TA007]
          Length = 393

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 254 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 313

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 314 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 373

Query: 116 Y 116
           Y
Sbjct: 374 Y 374


>gi|42543295|pdb|1PM2|A Chain A, Crystal Structure Of Manganese Substituted R2-D84e (D84e
           Mutant Of The R2 Subunit Of E. Coli Ribonucleotide
           Reductase)
 gi|42543296|pdb|1PM2|B Chain B, Crystal Structure Of Manganese Substituted R2-D84e (D84e
           Mutant Of The R2 Subunit Of E. Coli Ribonucleotide
           Reductase)
          Length = 339

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
            +GLN     QY+++I N R   +GL+  F    NP PW++  +
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWINTWL 339


>gi|331658316|ref|ZP_08359278.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA206]
 gi|307626227|gb|ADN70531.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           UM146]
 gi|331056564|gb|EGI28573.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA206]
          Length = 389

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 369

Query: 116 Y 116
           Y
Sbjct: 370 Y 370


>gi|229505158|ref|ZP_04394668.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae BX 330286]
 gi|229511170|ref|ZP_04400649.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae B33]
 gi|229515628|ref|ZP_04405087.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae TMA 21]
 gi|229518289|ref|ZP_04407733.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae RC9]
 gi|229521368|ref|ZP_04410787.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae TM 11079-80]
 gi|229525854|ref|ZP_04415259.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae bv. albensis VL426]
 gi|229529665|ref|ZP_04419055.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae 12129(1)]
 gi|229608178|ref|YP_002878826.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio cholerae
           MJ-1236]
 gi|229333439|gb|EEN98925.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae 12129(1)]
 gi|229339435|gb|EEO04452.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae bv. albensis VL426]
 gi|229341466|gb|EEO06469.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae TM 11079-80]
 gi|229345004|gb|EEO09978.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae RC9]
 gi|229347397|gb|EEO12357.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae TMA 21]
 gi|229351135|gb|EEO16076.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae B33]
 gi|229357381|gb|EEO22298.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae BX 330286]
 gi|229370833|gb|ACQ61256.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae MJ-1236]
          Length = 381

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++            +E +Q+S  +  EA   E  +A      G 
Sbjct: 241 RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAEYLFKDGS 300

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID 101
            +GLN     QY+++I N R   +GLEP +   T NP PW++  + 
Sbjct: 301 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWINAWLS 346


>gi|332093862|gb|EGI98916.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           boydii 5216-82]
          Length = 376

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|262402402|ref|ZP_06078963.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           sp. RC586]
 gi|262351184|gb|EEZ00317.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           sp. RC586]
          Length = 360

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++            +E +Q+S  +  EA   E  +A      G 
Sbjct: 220 RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAAYLFKDGS 279

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID 101
            +GLN     QY+++I N R   +GLEP +   T NP PW++  + 
Sbjct: 280 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPTATTNPIPWINAWLS 325


>gi|170682190|ref|YP_001744431.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           SMS-3-5]
 gi|170519908|gb|ACB18086.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli SMS-3-5]
 gi|315285847|gb|EFU45287.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 110-3]
 gi|315298059|gb|EFU57328.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 16-3]
          Length = 393

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 254 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 313

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 314 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 373

Query: 116 Y 116
           Y
Sbjct: 374 Y 374


>gi|161582009|ref|NP_230900.2| ribonucleotide-diphosphate reductase subunit beta [Vibrio cholerae
           O1 biovar El Tor str. N16961]
 gi|255745652|ref|ZP_05419600.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholera CIRS 101]
 gi|262159072|ref|ZP_06030184.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae INDRE 91/1]
 gi|262169430|ref|ZP_06037122.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae RC27]
 gi|262191406|ref|ZP_06049594.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae CT 5369-93]
 gi|255736727|gb|EET92124.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholera CIRS 101]
 gi|262022243|gb|EEY40952.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae RC27]
 gi|262029257|gb|EEY47909.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae INDRE 91/1]
 gi|262032695|gb|EEY51245.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae CT 5369-93]
 gi|327483944|gb|AEA78351.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Vibrio cholerae LMA3894-4]
          Length = 377

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++            +E +Q+S  +  EA   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID 101
            +GLN     QY+++I N R   +GLEP +   T NP PW++  + 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWINAWLS 342


>gi|121590730|ref|ZP_01678061.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           2740-80]
 gi|147674333|ref|YP_001216820.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio cholerae
           O395]
 gi|153212320|ref|ZP_01948108.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           1587]
 gi|153801907|ref|ZP_01956493.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MZO-3]
 gi|153823603|ref|ZP_01976270.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           B33]
 gi|153827294|ref|ZP_01979961.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MZO-2]
 gi|153829732|ref|ZP_01982399.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           623-39]
 gi|227081427|ref|YP_002809978.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           M66-2]
 gi|254291706|ref|ZP_04962493.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           AM-19226]
 gi|254848379|ref|ZP_05237729.1| ribonucleoside-diphosphate reductase [Vibrio cholerae MO10]
 gi|297578847|ref|ZP_06940775.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio cholerae
           RC385]
 gi|298498653|ref|ZP_07008460.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MAK 757]
 gi|9655738|gb|AAF94414.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           O1 biovar El Tor str. N16961]
 gi|121547411|gb|EAX57522.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           2740-80]
 gi|124116698|gb|EAY35518.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           1587]
 gi|124122552|gb|EAY41295.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MZO-3]
 gi|126518882|gb|EAZ76105.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           B33]
 gi|146316216|gb|ABQ20755.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           O395]
 gi|148874766|gb|EDL72901.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           623-39]
 gi|149738785|gb|EDM53127.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MZO-2]
 gi|150422390|gb|EDN14350.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           AM-19226]
 gi|227009315|gb|ACP05527.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           M66-2]
 gi|227013172|gb|ACP09382.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           O395]
 gi|254844084|gb|EET22498.1| ribonucleoside-diphosphate reductase [Vibrio cholerae MO10]
 gi|297536441|gb|EFH75274.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio cholerae
           RC385]
 gi|297542986|gb|EFH79036.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MAK 757]
          Length = 389

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++            +E +Q+S  +  EA   E  +A      G 
Sbjct: 249 RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAEYLFKDGS 308

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID 101
            +GLN     QY+++I N R   +GLEP +   T NP PW++  + 
Sbjct: 309 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWINAWLS 354


>gi|297265423|ref|XP_001091447.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Macaca
           mulatta]
          Length = 704

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 2/66 (3%)

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
           +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ
Sbjct: 628 IGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQ 685

Query: 118 QGAELK 123
           +   + 
Sbjct: 686 RMGVMS 691


>gi|259907948|ref|YP_002648304.1| ribonucleotide-diphosphate reductase subunit beta [Erwinia
           pyrifoliae Ep1/96]
 gi|224963570|emb|CAX55060.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           pyrifoliae Ep1/96]
 gi|283477829|emb|CAY73745.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           pyrifoliae DSM 12163]
 gi|310768143|gb|ADP13093.1| ribonucleotide-diphosphate reductase subunit beta [Erwinia sp.
           Ejp617]
          Length = 376

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    KE +Q+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAKECRQECYDLFVLAAEQEKEWAEYLFSGGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R + +GL+  FK   NP PW+ S ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYIEYITNIRMNAVGLDLPFKTRSNPIPWINSWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|188533366|ref|YP_001907163.1| ribonucleotide-diphosphate reductase subunit beta [Erwinia
           tasmaniensis Et1/99]
 gi|188028408|emb|CAO96269.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           tasmaniensis Et1/99]
          Length = 376

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    KE +Q+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAKECRQECYDLFVLAAEQEKEWAEYLFSGGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R + +GL+  FK   NP PW+ S ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYIEYITNIRMNAVGLDLPFKTRSNPIPWINSWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|218690398|ref|YP_002398610.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           ED1a]
 gi|218427962|emb|CAR08882.2| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli ED1a]
          Length = 376

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|26248623|ref|NP_754663.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           CFT073]
 gi|74312755|ref|YP_311174.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sonnei
           Ss046]
 gi|91211528|ref|YP_541514.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           UTI89]
 gi|110642443|ref|YP_670173.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           536]
 gi|157157492|ref|YP_001463584.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           E24377A]
 gi|161485800|ref|NP_708125.3| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri 2a str. 301]
 gi|161486465|ref|NP_837840.2| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri 2a str. 2457T]
 gi|191166513|ref|ZP_03028343.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B7A]
 gi|191170278|ref|ZP_03031832.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli F11]
 gi|194433322|ref|ZP_03065602.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella
           dysenteriae 1012]
 gi|209919687|ref|YP_002293771.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           SE11]
 gi|215487452|ref|YP_002329883.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O127:H6 str. E2348/69]
 gi|218554798|ref|YP_002387711.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           IAI1]
 gi|218559152|ref|YP_002392065.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           S88]
 gi|218695841|ref|YP_002403508.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           55989]
 gi|218700706|ref|YP_002408335.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           IAI39]
 gi|227887293|ref|ZP_04005098.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 83972]
 gi|253772842|ref|YP_003035673.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254162246|ref|YP_003045354.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           B str. REL606]
 gi|256017603|ref|ZP_05431468.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9]
 gi|260844831|ref|YP_003222609.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O103:H2 str. 12009]
 gi|260856285|ref|YP_003230176.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O26:H11 str. 11368]
 gi|260868965|ref|YP_003235367.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O111:H- str. 11128]
 gi|293446578|ref|ZP_06663000.1| ribonucleoside-diphosphate reductase [Escherichia coli B088]
 gi|300818165|ref|ZP_07098377.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 107-1]
 gi|300822109|ref|ZP_07102251.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 119-7]
 gi|300981251|ref|ZP_07175428.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 200-1]
 gi|300983269|ref|ZP_07176508.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 45-1]
 gi|301048988|ref|ZP_07195975.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 185-1]
 gi|306814652|ref|ZP_07448814.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           NC101]
 gi|307311198|ref|ZP_07590842.1| ribonucleotide reductase [Escherichia coli W]
 gi|309793115|ref|ZP_07687543.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 145-7]
 gi|331647890|ref|ZP_08348982.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M605]
 gi|331668939|ref|ZP_08369787.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA271]
 gi|331678186|ref|ZP_08378861.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H591]
 gi|26109028|gb|AAN81231.1|AE016763_190 Ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
           CFT073]
 gi|73856232|gb|AAZ88939.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           sonnei Ss046]
 gi|91073102|gb|ABE07983.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
           UTI89]
 gi|110344035|gb|ABG70272.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
           536]
 gi|157079522|gb|ABV19230.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E24377A]
 gi|190903473|gb|EDV63192.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B7A]
 gi|190909794|gb|EDV69379.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli F11]
 gi|194418416|gb|EDX34505.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella
           dysenteriae 1012]
 gi|209912946|dbj|BAG78020.1| ribonucleoside diphosphate reductase beta subunit [Escherichia coli
           SE11]
 gi|215265524|emb|CAS09927.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli O127:H6 str. E2348/69]
 gi|218352573|emb|CAU98352.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli 55989]
 gi|218361566|emb|CAQ99157.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli IAI1]
 gi|218365921|emb|CAR03663.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli S88]
 gi|218370692|emb|CAR18503.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli IAI39]
 gi|222033996|emb|CAP76737.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli LF82]
 gi|227835643|gb|EEJ46109.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 83972]
 gi|242377869|emb|CAQ32637.1| nrdB, subunit of B2 protein and GDP reductase [multifunctional]
           [Escherichia coli BL21(DE3)]
 gi|253323886|gb|ACT28488.1| ribonucleotide reductase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253974147|gb|ACT39818.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
           B str. REL606]
 gi|253978314|gb|ACT43984.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
           BL21(DE3)]
 gi|257754934|dbj|BAI26436.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O26:H11 str. 11368]
 gi|257759978|dbj|BAI31475.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O103:H2 str. 12009]
 gi|257765321|dbj|BAI36816.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O111:H- str. 11128]
 gi|281179326|dbj|BAI55656.1| ribonucleoside diphosphate reductase beta subunit [Escherichia coli
           SE15]
 gi|291323408|gb|EFE62836.1| ribonucleoside-diphosphate reductase [Escherichia coli B088]
 gi|294490302|gb|ADE89058.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli IHE3034]
 gi|300299180|gb|EFJ55565.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 185-1]
 gi|300307615|gb|EFJ62135.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 200-1]
 gi|300408603|gb|EFJ92141.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 45-1]
 gi|300525239|gb|EFK46308.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 119-7]
 gi|300529309|gb|EFK50371.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 107-1]
 gi|305852046|gb|EFM52498.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           NC101]
 gi|306908704|gb|EFN39201.1| ribonucleotide reductase [Escherichia coli W]
 gi|307554301|gb|ADN47076.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli ABU 83972]
 gi|308123401|gb|EFO60663.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 145-7]
 gi|312946856|gb|ADR27683.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O83:H1 str. NRG 857C]
 gi|313651060|gb|EFS15459.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           flexneri 2a str. 2457T]
 gi|315061535|gb|ADT75862.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli W]
 gi|315292180|gb|EFU51532.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 153-1]
 gi|320178793|gb|EFW53756.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
           ATCC 9905]
 gi|320196104|gb|EFW70728.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           WV_060327]
 gi|320199830|gb|EFW74419.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           EC4100B]
 gi|323156512|gb|EFZ42666.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli EPECa14]
 gi|323161696|gb|EFZ47579.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli E128010]
 gi|323168602|gb|EFZ54282.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           sonnei 53G]
 gi|323171914|gb|EFZ57558.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli LT-68]
 gi|323176838|gb|EFZ62428.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 1180]
 gi|323184146|gb|EFZ69523.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 1357]
 gi|323188037|gb|EFZ73332.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli RN587/1]
 gi|323377884|gb|ADX50152.1| Ribonucleoside-diphosphate reductase [Escherichia coli KO11]
 gi|324006608|gb|EGB75827.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 57-2]
 gi|324013118|gb|EGB82337.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 60-1]
 gi|324117882|gb|EGC11781.1| ribonucleotide reductase [Escherichia coli E1167]
 gi|325496725|gb|EGC94584.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia
           fergusonii ECD227]
 gi|330912066|gb|EGH40576.1| ribonucleotide reductase of class 1a (aerobic), beta subunit
           [Escherichia coli AA86]
 gi|331043614|gb|EGI15752.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M605]
 gi|331064133|gb|EGI36044.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA271]
 gi|331074646|gb|EGI45966.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H591]
 gi|332096162|gb|EGJ01165.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           dysenteriae 155-74]
 gi|332754883|gb|EGJ85248.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           flexneri 4343-70]
 gi|332755286|gb|EGJ85650.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           flexneri K-671]
 gi|332756386|gb|EGJ86737.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           flexneri 2747-71]
 gi|332766056|gb|EGJ96266.1| nrdB [Shigella flexneri 2930-71]
 gi|333001382|gb|EGK20950.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           flexneri VA-6]
 gi|333002603|gb|EGK22163.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           flexneri K-272]
 gi|333016476|gb|EGK35807.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           flexneri K-304]
 gi|333016745|gb|EGK36073.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           flexneri K-227]
          Length = 376

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|312967536|ref|ZP_07781751.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 2362-75]
 gi|312287733|gb|EFR15638.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 2362-75]
          Length = 359

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 220 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 279

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 280 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 339

Query: 116 Y 116
           Y
Sbjct: 340 Y 340


>gi|170767354|ref|ZP_02901807.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           albertii TW07627]
 gi|170123688|gb|EDS92619.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           albertii TW07627]
          Length = 376

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|323945045|gb|EGB41110.1| nrdB protein [Escherichia coli H120]
 gi|333002093|gb|EGK21659.1| ribonucleoside-diphosphate reductase 1 subunit beta domain protein
           [Shigella flexneri K-218]
          Length = 178

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 39  RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 98

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 99  MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 158

Query: 116 Y 116
           Y
Sbjct: 159 Y 159


>gi|284009345|emb|CBA76525.1| ribonucleoside-diphosphate reductase 1, beta subunit [Arsenophonus
           nasoniae]
          Length = 378

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    KE ++    +  +A   E  +A      G 
Sbjct: 239 RDEALHLTGTQHMLNLMRSGQDDPEMAIIAKECEEACYRLFVQAAEQEKEWAEYLFSGGS 298

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 299 MIGLNKDILCQYIEYITNIRMQAVGLKLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 358

Query: 116 Y 116
           Y
Sbjct: 359 Y 359


>gi|332974193|gb|EGK11127.1| ribonucleotide-diphosphate reductase beta subunit [Psychrobacter
           sp. 1501(2011)]
          Length = 377

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 7/122 (5%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN +    ++P +    ++ +++S  +  +A   E  +A      G 
Sbjct: 237 RDEALHLTSTQHMINILASGKDDPEMAEIAEDCREESIEIFRKAAEQEKEWAGYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS-EVIDLKKEKNFFETRVT 114
            +GLN     QY+++I N R   +GL  +F  ++ NP PW++  +     +    ET ++
Sbjct: 297 MIGLNKDILCQYVEYITNLRMEAVGLPSIFPDSKSNPIPWINTWLSSDNVQVAPQETEIS 356

Query: 115 EY 116
            Y
Sbjct: 357 SY 358


>gi|326782536|ref|YP_004323092.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM1]
 gi|310002750|gb|ADO97149.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM1]
          Length = 386

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVINQIKI-ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           RDES HL    +++ + K  ++P +    KE Q     M       E  +A     +G  
Sbjct: 246 RDESQHLVITQNILRKWKEGDDPEMAVIAKEEQPFVAEMFKRTVNEEKMWADYLFKQGSM 305

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEKNF-FETRVT 114
           +GLN      Y+++IANRR   IGL+P+F      NP PW    ++ K ++N   ET + 
Sbjct: 306 IGLNDRLLHNYVEWIANRRMKAIGLDPIFDVPAKNNPLPWTEHWLNSKGQQNAPQETEIE 365

Query: 115 EYQQGA 120
            Y  G 
Sbjct: 366 SYVVGG 371


>gi|242238482|ref|YP_002986663.1| ribonucleotide-diphosphate reductase subunit beta [Dickeya dadantii
           Ech703]
 gi|242130539|gb|ACS84841.1| ribonucleotide reductase [Dickeya dadantii Ech703]
          Length = 376

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGQDDPEMAKVAEECQQQCYDLFVMAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFETRTNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|50120137|ref|YP_049304.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           atrosepticum SCRI1043]
 gi|49610663|emb|CAG74108.1| ribonucleoside-diphosphate reductase 1 beta chain [Pectobacterium
           atrosepticum SCRI1043]
          Length = 376

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQGVGLSLPFQTRTNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQIDSEISDD 369


>gi|297521777|ref|ZP_06940163.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           OP50]
          Length = 174

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 35  RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 94

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 95  MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 154

Query: 116 Y 116
           Y
Sbjct: 155 Y 155


>gi|238761950|ref|ZP_04622923.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           kristensenii ATCC 33638]
 gi|238699678|gb|EEP92422.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           kristensenii ATCC 33638]
          Length = 400

 Score =  105 bits (262), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 261 RDEALHLTGTQHIINLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 320

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F    NP PW+ S ++    +    E  V+ 
Sbjct: 321 MIGLNKEILCQYVEYITNIRMQAVGLGVPFNTRTNPIPWINSWLVSDNVQVAPQEVEVSS 380

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 381 YLVGQIDSEISAD 393


>gi|283832326|ref|ZP_06352067.1| ribonucleoside-diphosphate reductase, beta subunit [Citrobacter
           youngae ATCC 29220]
 gi|291071973|gb|EFE10082.1| ribonucleoside-diphosphate reductase, beta subunit [Citrobacter
           youngae ATCC 29220]
          Length = 376

 Score =  105 bits (262), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A L E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAALQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQIDSEVDTD 369


>gi|417659|sp|P32209|RIR2_SWPVK RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|347472|gb|AAC37857.1| ribonucleotide reductase [Swinepox virus]
          Length = 274

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 7/83 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++   +++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSKEVITSIIIDAVNIEKEFLTVAIPVDLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEP 84
                QY++F+A+R   ++G E 
Sbjct: 248 CCLMSQYIEFVADRLLTELGCEK 270


>gi|261211025|ref|ZP_05925315.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           sp. RC341]
 gi|260840000|gb|EEX66600.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           sp. RC341]
          Length = 360

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++            +E +Q+S  +  EA   E  +A      G 
Sbjct: 220 RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAAYLFKDGS 279

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID 101
            +GLN     QY+++I N R   +GLEP +   T NP PW++  + 
Sbjct: 280 MIGLNRDILCQYVEYITNIRMQAVGLEPAYPTATTNPIPWINAWLS 325


>gi|269102947|ref|ZP_06155644.1| ribonucleotide reductase of class Ia (aerobic) beta subunit
           [Photobacterium damselae subsp. damselae CIP 102761]
 gi|268162845|gb|EEZ41341.1| ribonucleotide reductase of class Ia (aerobic) beta subunit
           [Photobacterium damselae subsp. damselae CIP 102761]
          Length = 377

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    KE + +   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLLRNGHDDPEMAEIAKESEAECFDIFKRAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101
            +GLN     QY+++I N R + +GLE  +   T+NP PW++  + 
Sbjct: 297 MIGLNKDILCQYVEYITNLRMNAVGLEHAYTGATQNPIPWINSWLS 342


>gi|326781924|ref|YP_004322326.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM2]
 gi|310003114|gb|ADO97512.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM2]
          Length = 397

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVINQI-KIENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           RDE+ HL    +++N+  + ++P +    KE ++ +      A   E  +A      G  
Sbjct: 257 RDENQHLAITQNILNKWAQGDDPEMKQIMKEEEEWTYKAFDNAVNEEKRWADYLFKDGSM 316

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEKNF-FETRVT 114
           +GLN    +QY++++ANRR   IGL+P +      NP PW    I  K  +    ET V 
Sbjct: 317 IGLNDKLLQQYVEWVANRRLKAIGLKPQYDIAASANPLPWTQHWISSKGLQVAPQETEVE 376

Query: 115 EYQQGA 120
            Y  G 
Sbjct: 377 SYVVGG 382


>gi|331035505|gb|AEC53062.1| ribonucleotide reductase subunit B [Synechococcus phage S-CRM01]
          Length = 381

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKS---RTMLHEATLLEIAYAHETMPKG-F 57
           RDE+ HL    ++IN  +  +     K + ++     ++   A   E A+A      G  
Sbjct: 241 RDENQHLFLTQNIINNWRNNDDPEMKKIYNEEIDHTTSLFEAAVDQEKAWAQYLFKTGSM 300

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114
           +GL+      Y+++IANRR   IG++P+++     NP PWM   +  K  +N   ET + 
Sbjct: 301 IGLSEKLLCNYVEWIANRRMKAIGIKPIYEIPANSNPLPWMDHWLKSKGVQNAPQETEIE 360

Query: 115 EYQQGA 120
            Y  G 
Sbjct: 361 SYIVGG 366


>gi|221134587|ref|ZP_03560892.1| ribonucleotide-diphosphate reductase subunit beta [Glaciecola sp.
           HTCC2999]
          Length = 376

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 5/105 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     V+N      ++P +    KE +Q++R +   A   E  +A      G 
Sbjct: 237 RDENLHLTSTQHVLNLWAKGKDDPEMAEIAKECEQEARDIFLNAVQQEKEWAAFLFNNGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101
            +GLN      Y+++IAN+R   IGL   F  + NP PWM+  ++
Sbjct: 297 MIGLNEEILCSYVEYIANQRMAAIGLGQPFDVSSNPLPWMNNYLN 341


>gi|292488819|ref|YP_003531706.1| ribonucleoside-diphosphate reductase 1 subunit beta [Erwinia
           amylovora CFBP1430]
 gi|292899970|ref|YP_003539339.1| ribonucleoside-diphosphate reductase 1 subunit beta [Erwinia
           amylovora ATCC 49946]
 gi|291199818|emb|CBJ46941.1| ribonucleoside-diphosphate reductase 1 beta subunit [Erwinia
           amylovora ATCC 49946]
 gi|291554253|emb|CBA21550.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           amylovora CFBP1430]
 gi|312172977|emb|CBX81232.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           amylovora ATCC BAA-2158]
          Length = 376

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    KE +Q+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAKECRQECYDLFVLAAEQEKEWAEYLFSGGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R + +GL+  FK   NP PW+ S ++    +    E  V+ 
Sbjct: 297 MIGLNKDILWQYIEYITNIRMNAVGLDLPFKTRSNPIPWINSWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|88801048|ref|ZP_01116596.1| ribonucleotide-diphosphate reductase beta subunit [Reinekea sp.
           MED297]
 gi|88776187|gb|EAR07414.1| ribonucleotide-diphosphate reductase beta subunit [Reinekea sp.
           MED297]
          Length = 369

 Score =  104 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 5/105 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL+    ++ Q     ++P +     E Q   R +  +A   E A+A+     G 
Sbjct: 230 RDEALHLSGTEFILRQWLHGGDDPQMQIVADEEQATIRQIFEDAAEQEKAWANYLFNDGS 289

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101
            +GLNA    QY++++ ++R   + L P++   +NP PWM   + 
Sbjct: 290 MIGLNAEILHQYIEYLTDQRLDALSLSPIYGRRDNPLPWMDNWVS 334


>gi|120598753|ref|YP_963327.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp.
           W3-18-1]
 gi|146293170|ref|YP_001183594.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           putrefaciens CN-32]
 gi|120558846|gb|ABM24773.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella sp. W3-18-1]
 gi|145564860|gb|ABP75795.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella putrefaciens CN-32]
 gi|319426318|gb|ADV54392.1| ribonucleotide reductase [Shewanella putrefaciens 200]
          Length = 376

 Score =  104 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    ++N ++   ++P +     + QQ++  +  +A   E  +A      G 
Sbjct: 237 RDEALHLNSTQHILNIMQGGKDDPEMGEIAAQCQQEAYDLFLKAAEQEKEWAKYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
            +GLN     QY++FI N+R   + L   +  + NP PWM   +
Sbjct: 297 MIGLNEQILCQYVEFITNQRMKSVNLPQPYPESTNPLPWMKNWL 340


>gi|283786035|ref|YP_003365900.1| ribonucleoside-diphosphate reductase 1 beta chain [Citrobacter
           rodentium ICC168]
 gi|282949489|emb|CBG89102.1| ribonucleoside-diphosphate reductase 1 beta chain [Citrobacter
           rodentium ICC168]
          Length = 376

 Score =  104 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A L E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAALQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQIDSEVDTD 369


>gi|183599610|ref|ZP_02961103.1| hypothetical protein PROSTU_03095 [Providencia stuartii ATCC 25827]
 gi|188021860|gb|EDU59900.1| hypothetical protein PROSTU_03095 [Providencia stuartii ATCC 25827]
          Length = 378

 Score =  104 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E + +   +  +A   E  +A     +G 
Sbjct: 239 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEDECYKLFVDAAEQEKEWAEYLFSEGS 298

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 299 MIGLNKDILCQYVEYITNIRMQAVGLKLPFEARSNPIPWINAWLVSDNVQVAPQEVEVSS 358

Query: 116 Y 116
           Y
Sbjct: 359 Y 359


>gi|251790602|ref|YP_003005323.1| ribonucleotide-diphosphate reductase subunit beta [Dickeya zeae
           Ech1591]
 gi|247539223|gb|ACT07844.1| ribonucleotide reductase [Dickeya zeae Ech1591]
          Length = 376

 Score =  104 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRAGQDDPEMAQVAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFETRTNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQIDSEINTD 369


>gi|237732274|ref|ZP_04562755.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter sp.
           30_2]
 gi|226907813|gb|EEH93731.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter sp.
           30_2]
          Length = 376

 Score =  104 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A L E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAALQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|238797463|ref|ZP_04640962.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           mollaretii ATCC 43969]
 gi|238718734|gb|EEQ10551.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           mollaretii ATCC 43969]
          Length = 376

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHIINLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F    NP PW+ S ++    +    E  V+ 
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGVPFNTRTNPIPWINSWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQIDSEISAD 369


>gi|253989035|ref|YP_003040391.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|211638141|emb|CAR66767.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotid
           reductase 1) (b2 protein) (r2 protein) [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253780485|emb|CAQ83647.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotid
           reductase 1) (b2 protein) (r2 protein) [Photorhabdus
           asymbiotica]
          Length = 376

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E +Q+   +  +A   E  +A     +G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIANECEQQCYDLFVQAAEQEKEWADYLFSEGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNRDILCQYVEYITNIRMQAVGLKLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|152971181|ref|YP_001336290.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206577425|ref|YP_002237361.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella
           pneumoniae 342]
 gi|262043285|ref|ZP_06016416.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288934289|ref|YP_003438348.1| ribonucleotide reductase [Klebsiella variicola At-22]
 gi|330000612|ref|ZP_08303755.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
 gi|150956030|gb|ABR78060.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206566483|gb|ACI08259.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella
           pneumoniae 342]
 gi|259039384|gb|EEW40524.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288889018|gb|ADC57336.1| ribonucleotide reductase [Klebsiella variicola At-22]
 gi|328537954|gb|EGF64133.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
          Length = 376

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVLAAQQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQIDSEVDAD 369


>gi|261253084|ref|ZP_05945657.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           orientalis CIP 102891]
 gi|260936475|gb|EEX92464.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           orientalis CIP 102891]
          Length = 377

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++            +E +Q+   +  EA   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   + + T NP PW++  + 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGAAYPEATSNPIPWINAWLS 342


>gi|255026984|ref|ZP_05298970.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL J2-003]
          Length = 336

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 4/110 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++ E +  G  G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWSEEVLQ-GIEGID 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNF 108
                 Y+++ AN+    +G+  L+  +++N   W+    D   + + +F
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDF 329


>gi|61806080|ref|YP_214440.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM2]
 gi|61374589|gb|AAX44586.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM2]
 gi|265525292|gb|ACY76089.1| NrdB [Prochlorococcus phage P-SSM2]
          Length = 384

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVINQIKI-ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           RDE+ HL    +++N  +  ++P +    KE +Q +  M  +    E  +A      G  
Sbjct: 244 RDENQHLAITQNILNNWRKGDDPEMVEIMKEEEQWTYQMFEKCVNEEKMWAEYLFKDGSM 303

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEKNF-FETRVT 114
           +GLN     QY++++ANRR   IG++P++      NP PW    I  K  +    ET V 
Sbjct: 304 IGLNDKLLHQYVEWVANRRMRSIGMKPVYDIAAKNNPLPWTEHWISSKGLQVAPQETEVE 363

Query: 115 EYQQGA 120
            Y  G 
Sbjct: 364 SYIVGG 369


>gi|296103863|ref|YP_003614009.1| ribonucleotide-diphosphate reductase beta subunit [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295058322|gb|ADF63060.1| ribonucleotide-diphosphate reductase beta subunit [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 376

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVLAAQQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|282600304|ref|ZP_05973774.2| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rustigianii DSM 4541]
 gi|282565783|gb|EFB71318.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rustigianii DSM 4541]
          Length = 380

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E +++   +  +A   E  +A     +G 
Sbjct: 241 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEEQCYQLFVDAAEQEKEWAEYLFSEGS 300

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 301 MIGLNKEILCQYVEYITNIRMQAVGLKLPFEARSNPIPWINAWLVSDNVQVAPQEVEVSS 360

Query: 116 Y 116
           Y
Sbjct: 361 Y 361


>gi|89074073|ref|ZP_01160574.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           sp. SKA34]
 gi|89050211|gb|EAR55722.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           sp. SKA34]
          Length = 377

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E +Q    +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLLRNGHDDPEMVEIATECEQDCFDLFKAAAEQEKEWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL P ++  T+NP PW++  + 
Sbjct: 297 MIGLNKQILCQYVEYITNLRMVAVGLRPAYEGATQNPIPWINSWLS 342


>gi|153819185|ref|ZP_01971852.1| ribonucleoside-diphosphate reductase 1 subunit beta [Vibrio
           cholerae NCTC 8457]
 gi|126510271|gb|EAZ72865.1| ribonucleoside-diphosphate reductase 1 subunit beta [Vibrio
           cholerae NCTC 8457]
          Length = 171

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++            +E +Q+S  +  EA   E  +A      G 
Sbjct: 31  RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAEYLFKDGS 90

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID 101
            +GLN     QY+++I N R   +GLEP +     NP PW++  + 
Sbjct: 91  MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWINAWLS 136


>gi|330445621|ref|ZP_08309273.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328489812|dbj|GAA03770.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 377

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E +Q+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLLRTGQDDPEMAEIAVECEQECFDIFKSAAEQEKDWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL P ++  T+NP PW++  + 
Sbjct: 297 MIGLNKQILCQYVEYITNLRMSAVGLRPAYEGATQNPIPWINSWLS 342


>gi|157375444|ref|YP_001474044.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           sediminis HAW-EB3]
 gi|157317818|gb|ABV36916.1| Ribonucleoside-diphosphate reductase [Shewanella sediminis HAW-EB3]
          Length = 376

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL+    ++       ++P +    +E ++  R +  +    E  +A      G 
Sbjct: 237 RDEALHLSGTQHILKLWANGNDDPEMVEVCQELREAGRQVFLDVVEQEKEWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI-DLKKEKNFFETRVTE 115
            +GLNA   +QY+++I+N R   IG E  F    NP PW++  +     +    E+ +T 
Sbjct: 297 MIGLNAEILKQYIEYISNNRMEAIGYEAPFAIKNNPLPWINTYLVSDNVQVAPQESEITS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  A +  D
Sbjct: 357 YLVGQVDATVSDD 369


>gi|262274472|ref|ZP_06052283.1| ribonucleotide reductase of class Ia (aerobic) beta subunit
           [Grimontia hollisae CIP 101886]
 gi|262221035|gb|EEY72349.1| ribonucleotide reductase of class Ia (aerobic) beta subunit
           [Grimontia hollisae CIP 101886]
          Length = 360

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    KE +Q    +   A   E  +A      G 
Sbjct: 220 RDEALHLTSTQHMLNILRSGDDDPEMAEIAKECEQVCFDLFKNAAEQEKEWAEYLFKDGS 279

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL+P ++   +NP PW++  + 
Sbjct: 280 MIGLNKDILCQYVEYITNLRMAAVGLKPAYQGANQNPIPWINAWLS 325


>gi|212638239|ref|YP_002314759.1| ribonucleotide-diphosphate reductase subunit beta [Anoxybacillus
           flavithermus WK1]
 gi|212559719|gb|ACJ32774.1| Ribonucleotide reductase, beta subunit [Anoxybacillus flavithermus
           WK1]
          Length = 345

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 54/125 (43%), Gaps = 5/125 (4%)

Query: 3   DESLHLNFGIDVINQIKIENPHLW-TKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           DE  H  F   ++  +  ENP +     F       + EA   E  ++   + +   G++
Sbjct: 217 DELCHSYFISQLVRAVLWENPQIDENGAFSAWIYDYIDEAIRYETEWSRFVL-RDIDGID 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK---KEKNFFETRVTEYQQ 118
               E+Y++++ N+R   +GL+  +   EN  PW+    D      + +FFE R   Y +
Sbjct: 276 VIEMEKYIEYLGNKRLRMLGLDDRYDADENSMPWIRVFSDENVNLGKTDFFEARPRSYTK 335

Query: 119 GAELK 123
             ++ 
Sbjct: 336 TTDVN 340


>gi|271499642|ref|YP_003332667.1| ribonucleotide reductase [Dickeya dadantii Ech586]
 gi|270343197|gb|ACZ75962.1| ribonucleotide reductase [Dickeya dadantii Ech586]
          Length = 376

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRAGQDDPEMAQIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFETRTNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQIDSEINTD 369


>gi|3891582|pdb|1AV8|A Chain A, Ribonucleotide Reductase R2 Subunit From E. Coli
 gi|3891583|pdb|1AV8|B Chain B, Ribonucleotide Reductase R2 Subunit From E. Coli
          Length = 340

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
            +GLN     QY+++I N R   +GL+  F+   NP PW++  +
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWL 339


>gi|323497713|ref|ZP_08102728.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           sinaloensis DSM 21326]
 gi|323317189|gb|EGA70185.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           sinaloensis DSM 21326]
          Length = 377

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++            +E +Q+   +  EA   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   + + T NP PW++  + 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGAAYPEATSNPIPWINAWLS 342


>gi|255928974|ref|YP_003097286.1| ribonucleotide reductase B subunit [Synechococcus phage S-RSM4]
 gi|255705260|emb|CAR63249.1| ribonucleotide reductase B subunit [Synechococcus phage S-RSM4]
          Length = 394

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVINQIKI-ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           RDES H+    +++N+ K  ++P +    KE ++    M  +    E  +A      G  
Sbjct: 254 RDESQHMTITQNILNKWKEGDDPEMVQIAKEEEENVYDMFRQCVEEEKLWAEYLFKDGSI 313

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEKNF-FETRVT 114
           +GLN     +Y+++ ANRR   IGL+ +F    + NP PW    +  K  +    ET V 
Sbjct: 314 IGLNDKLLSKYVEWTANRRLKSIGLKAIFDTPVSNNPLPWTEHWLSSKGMQVAPQETEVE 373

Query: 115 EYQQGA 120
            Y  G+
Sbjct: 374 SYLIGS 379


>gi|258624428|ref|ZP_05719375.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus
           VM603]
 gi|258583275|gb|EEW08077.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus
           VM603]
          Length = 381

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++            +E +Q+S  +  +A   E  +A      G 
Sbjct: 241 RDEALHLTGTQHMINILRNGMDDFTFLQVAEECKQESFDLFKQAAEQEKEWASYLFKDGS 300

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101
            +GLN     QY+++I N R   +GLEP +     NP PW++  + 
Sbjct: 301 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAAVNNPIPWINAWLS 346


>gi|1941986|pdb|1PFR|A Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain
 gi|1941987|pdb|1PFR|B Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain
          Length = 340

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
            +GLN     QY+++I N R   +GL+  F+   NP PW++  +
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWL 339


>gi|3891570|pdb|2AV8|A Chain A, Y122f Mutant Of Ribonucleotide Reductase From Escherichia
           Coli
 gi|3891571|pdb|2AV8|B Chain B, Y122f Mutant Of Ribonucleotide Reductase From Escherichia
           Coli
          Length = 340

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
            +GLN     QY+++I N R   +GL+  F+   NP PW++  +
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWL 339


>gi|262171721|ref|ZP_06039399.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           mimicus MB-451]
 gi|261892797|gb|EEY38783.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           mimicus MB-451]
          Length = 377

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++            +E +Q+S  +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMINILRNGMDDFTFLQVAEECKQESFDLFKQAAEQEKEWASYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101
            +GLN     QY+++I N R   +GLEP +     NP PW++  + 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAAVNNPIPWINAWLS 342


>gi|221105497|ref|XP_002169241.1| PREDICTED: similar to ribonucleoside-diphosphate reductase small
           chain [Hydra magnipapillata]
          Length = 363

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 11/119 (9%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DE +H  FG  +   I         +   ++   ++ EA  +  ++  + +    +G+N 
Sbjct: 237 DEGMHTIFGCVIYTFIIY-------RLSFEEICELMKEAVEICKSFTKDAICVDMIGMNV 289

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENP--FPWMSEVIDLKKEKNFFETRVTEYQQG 119
                Y++++A+R    +G E +F  T+ P  F +M  +  L K+ NFFE R TEYQ+ 
Sbjct: 290 ELMYNYIEYVADRLMVYLGYEKIF-MTKIPDQFQFMDTIGFLNKD-NFFERRATEYQKA 346


>gi|308049658|ref|YP_003913224.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Ferrimonas balearica DSM 9799]
 gi|307631848|gb|ADN76150.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Ferrimonas balearica DSM 9799]
          Length = 378

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 37/104 (35%), Positives = 49/104 (47%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE LHL     +IN +    ++P +     E   +S  +   A   E A+A      G 
Sbjct: 239 RDEQLHLVGTQHMINLMADGRDDPEMAEIAIECHSESIEIFRRAAEQEKAWASYLFKDGS 298

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
            +GLN    E Y++FI N R   IGL PLF    NP PWMS  +
Sbjct: 299 MLGLNKQIIEDYVEFITNERMAGIGLPPLFDKRSNPLPWMSTWL 342


>gi|258620211|ref|ZP_05715250.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus
           VM573]
 gi|258587569|gb|EEW12279.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus
           VM573]
          Length = 381

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++            +E +Q+S  +  +A   E  +A      G 
Sbjct: 241 RDEALHLTGTQHMINILRNGMDDFTFLQVAEECKQESFDLFKQAAEQEKEWASYLFKDGS 300

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101
            +GLN     QY+++I N R   +GLEP +     NP PW++  + 
Sbjct: 301 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAAVNNPIPWINAWLS 346


>gi|262165506|ref|ZP_06033243.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           mimicus VM223]
 gi|262025222|gb|EEY43890.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           mimicus VM223]
          Length = 377

 Score =  103 bits (259), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++            +E +Q+S  +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMINILRNGMDDFTFLQVAEECKQESFDLFKQAAEQEKEWASYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101
            +GLN     QY+++I N R   +GLEP +     NP PW++  + 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAAVNNPIPWINAWLS 342


>gi|146312444|ref|YP_001177518.1| ribonucleotide-diphosphate reductase subunit beta [Enterobacter sp.
           638]
 gi|145319320|gb|ABP61467.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Enterobacter sp. 638]
          Length = 376

 Score =  103 bits (259), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    +E +Q+   +   A L E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVLAALQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GLE  FK   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLELPFKTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|83754022|pdb|2ALX|A Chain A, Ribonucleotide Reductase R2 From Escherichia Coli In Space
           Group P6(1)22
          Length = 340

 Score =  103 bits (259), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
            +GLN     QY+++I N R   +GL+  F+   NP PW++  +
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWL 340


>gi|242012701|ref|XP_002427066.1| Ribonucleoside-diphosphate reductase M2 subunit, putative
           [Pediculus humanus corporis]
 gi|212511324|gb|EEB14328.1| Ribonucleoside-diphosphate reductase M2 subunit, putative
           [Pediculus humanus corporis]
          Length = 304

 Score =  103 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 42/84 (50%), Gaps = 7/84 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         ++  K  + +   ++ +A  +E  +  E +P   +G+N
Sbjct: 226 RDEGLHCDFACLMFK-------YVVQKPTEDEICDIIKDAVAIEQEFLTEALPVNLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPL 85
               ++Y++F+A+R   ++G + +
Sbjct: 279 CSLMKKYIEFVADRLLVELGCKKV 302


>gi|117619492|ref|YP_856857.1| ribonucleotide-diphosphate reductase subunit beta [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117560899|gb|ABK37847.1| ribonucleoside-diphosphate reductase, beta subunit [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 377

 Score =  103 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 7/122 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E +Q    +  EA + E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGQDDPEMAEIAAECEQACFELFKEAAIQEKEWAEYLFQDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS-EVIDLKKEKNFFETRVT 114
            +GLN     QY+++I N R + +GL+P F   + NP PW++  +     +    E  V+
Sbjct: 297 MIGLNKDILCQYVEYITNLRMNAVGLQPAFAGAKQNPIPWINTWLSSDNVQVAPQEVEVS 356

Query: 115 EY 116
            Y
Sbjct: 357 SY 358


>gi|156975012|ref|YP_001445919.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio harveyi
           ATCC BAA-1116]
 gi|156526606|gb|ABU71692.1| hypothetical protein VIBHAR_02734 [Vibrio harveyi ATCC BAA-1116]
          Length = 377

 Score =  103 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +IN ++            +E +Q+   +  EA   E  +A      G 
Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFLFMQIAEEEKQECFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   + + T NP PW++  + 
Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATSNPIPWINAWLS 342


>gi|85711601|ref|ZP_01042658.1| ribonucleotide-diphosphate reductase beta subunit [Idiomarina
           baltica OS145]
 gi|85694461|gb|EAQ32402.1| ribonucleotide-diphosphate reductase beta subunit [Idiomarina
           baltica OS145]
          Length = 377

 Score =  103 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 6/105 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE++HL     +IN  +   ++P +    +E   ++  +   A   E  +AH     G 
Sbjct: 237 RDENVHLTSTQHMINLWQDGEDDPEMAEIAEELADEAYEIFMTAVKQEKQWAHYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVI 100
            +GLN     QY+++IAN R   IG +  F +   NP PWM++ +
Sbjct: 297 MIGLNESMLCQYVEYIANLRMQAIGYDAPFPEQRSNPLPWMNKYL 341


>gi|307129979|ref|YP_003881995.1| Ribonucleotide reductase of class Ia (aerobic), subunit beta
           [Dickeya dadantii 3937]
 gi|306527508|gb|ADM97438.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Dickeya dadantii 3937]
          Length = 376

 Score =  103 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRAGQDDPEMAKIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFETRTNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|329298015|ref|ZP_08255351.1| ribonucleotide-diphosphate reductase subunit beta [Plautia stali
           symbiont]
          Length = 376

 Score =  103 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E + +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRTGEDDPEMKEIAAECRDECFDLFKKAAEQEKEWAEYLFSGGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW+ S ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLDLPFQTRSNPIPWINSWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|269862698|ref|XP_002650940.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220065381|gb|EED43116.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 332

 Score =  103 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 10/96 (10%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   I  +               ++ EA  +E  +  E++P   +G+N
Sbjct: 247 RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 297

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
                QY++F+A+R    +G + ++  +  PF +M 
Sbjct: 298 CKLMCQYIEFVADRLLFALGEKKIYNVST-PFDFME 332


>gi|260778827|ref|ZP_05887719.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260604991|gb|EEX31286.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 377

 Score =  103 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++            +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKDAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL+  + + T NP PW++  + 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDAAYPEATSNPIPWINAWLS 342


>gi|153835812|ref|ZP_01988479.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio harveyi
           HY01]
 gi|148867435|gb|EDL66832.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio harveyi
           HY01]
          Length = 377

 Score =  103 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +IN ++            +E +Q+   +  EA   E  +A      G 
Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFSFMQIAEEAKQECFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   + + T NP PW++  + 
Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATSNPIPWINAWLS 342


>gi|323494790|ref|ZP_08099889.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           brasiliensis LMG 20546]
 gi|323310983|gb|EGA64148.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           brasiliensis LMG 20546]
          Length = 377

 Score =  103 bits (258), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++            +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKDAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL+  + + T NP PW++  + 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDAAYPEATSNPIPWINAWLS 342


>gi|260598671|ref|YP_003211242.1| ribonucleotide-diphosphate reductase subunit beta [Cronobacter
           turicensis z3032]
 gi|260217848|emb|CBA32365.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Cronobacter
           turicensis z3032]
          Length = 376

 Score =  103 bits (258), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGEDDPEMAIIAEECKQECYDLFVLAAQQEKEWAEYLFQGGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  FK   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFKTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|156933156|ref|YP_001437072.1| ribonucleotide-diphosphate reductase subunit beta [Cronobacter
           sakazakii ATCC BAA-894]
 gi|156531410|gb|ABU76236.1| hypothetical protein ESA_00966 [Cronobacter sakazakii ATCC BAA-894]
          Length = 376

 Score =  103 bits (258), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGEDDPEMAAIAEECKQECYDLFVLAAQQEKEWAEYLFQGGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  FK   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFKTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|149190928|ref|ZP_01869191.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio shilonii
           AK1]
 gi|148835283|gb|EDL52257.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio shilonii
           AK1]
          Length = 377

 Score =  103 bits (258), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++            +E +Q    +  EA   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQDCFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101
            +GLN     QY+++I+N R   +GL+  + + T NP PW++  + 
Sbjct: 297 MIGLNKDILCQYVEYISNVRMQAVGLDAAYPEATSNPIPWINAWLS 342


>gi|27366311|ref|NP_761839.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           vulnificus CMCP6]
 gi|37679427|ref|NP_934036.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           vulnificus YJ016]
 gi|320156821|ref|YP_004189200.1| ribonucleotide reductase of class Ia (aerobic), subunit beta
           [Vibrio vulnificus MO6-24/O]
 gi|27362512|gb|AAO11366.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Vibrio vulnificus CMCP6]
 gi|37198171|dbj|BAC94007.1| ribonucleotide reductase, beta subunit [Vibrio vulnificus YJ016]
 gi|319932133|gb|ADV86997.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Vibrio vulnificus MO6-24/O]
          Length = 377

 Score =  103 bits (258), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +IN ++            +E +Q+   +  EA   E  +A      G 
Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFSFMQIAEEAKQQCFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   +   T NP PW++  + 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPVAYPNATSNPIPWINAWLS 342


>gi|327394563|dbj|BAK11985.1| ribonucleoside-diphosphate reductase 1 beta subunit NrdB [Pantoea
           ananatis AJ13355]
          Length = 376

 Score =  103 bits (258), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E +++   +  +A L E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRTGEDDPEMKEIAAECREECFELFKKAALQEKEWAEYLFSGGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLDLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|56460472|ref|YP_155753.1| ribonucleotide-diphosphate reductase subunit beta [Idiomarina
           loihiensis L2TR]
 gi|56179482|gb|AAV82204.1| Ribonucleotide reductase, beta subunit [Idiomarina loihiensis L2TR]
          Length = 377

 Score =  103 bits (258), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 6/105 (5%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE++HL     ++N  Q   ++P +    +E +  +  +   A   E  +AH     G 
Sbjct: 237 RDENVHLTSTQHILNLWQYGEDDPEMKEIAEELRDDAYEIFMTAVKQEKQWAHYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVI 100
            +GLN     QY+++IAN R   IG +  F+    NP PWM++ +
Sbjct: 297 MIGLNESMLCQYVEYIANLRMQAIGFDAPFENQRSNPLPWMNKYL 341


>gi|148978906|ref|ZP_01815226.1| ribonucleotide-diphosphate reductase beta subunit [Vibrionales
           bacterium SWAT-3]
 gi|145962104|gb|EDK27390.1| ribonucleotide-diphosphate reductase beta subunit [Vibrionales
           bacterium SWAT-3]
          Length = 377

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++            +E +Q+   +  EA   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFAFMQIAEECKQECFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   + + T NP PW++  + 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGTAYPEATSNPIPWINAWLS 342


>gi|332162349|ref|YP_004298926.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|318606422|emb|CBY27920.1| ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Yersinia enterocolitica subsp. palearctica Y11]
 gi|325666579|gb|ADZ43223.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330864218|emb|CBX74276.1| ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           enterocolitica W22703]
          Length = 376

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F    NP PW+ S ++    +    E  V+ 
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGVPFNTRTNPIPWINSWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQIDSEVSAD 369


>gi|291618170|ref|YP_003520912.1| NrdB [Pantoea ananatis LMG 20103]
 gi|291153200|gb|ADD77784.1| NrdB [Pantoea ananatis LMG 20103]
          Length = 387

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E +++   +  +A L E  +A      G 
Sbjct: 248 RDEALHLTGTQHMLNLLRTGEDDPEMKEIAAECREECFELFKKAALQEKEWAEYLFSGGS 307

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 308 MIGLNKDILCQYIEYITNIRMQAVGLDLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 367

Query: 116 Y 116
           Y
Sbjct: 368 Y 368


>gi|28898709|ref|NP_798314.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|153839553|ref|ZP_01992220.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AQ3810]
 gi|260363692|ref|ZP_05776476.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus K5030]
 gi|260879741|ref|ZP_05892096.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AN-5034]
 gi|260898785|ref|ZP_05907226.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus Peru-466]
 gi|260901598|ref|ZP_05909993.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AQ4037]
 gi|28806927|dbj|BAC60198.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|149746934|gb|EDM57922.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AQ3810]
 gi|308086689|gb|EFO36384.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus Peru-466]
 gi|308093260|gb|EFO42955.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AN-5034]
 gi|308108691|gb|EFO46231.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AQ4037]
 gi|308113401|gb|EFO50941.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus K5030]
          Length = 377

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +IN ++            +E +Q    +  EA   E  +A      G 
Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFSFMQIAEEAKQDCFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   + + T NP PW++  + 
Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATTNPIPWINAWLS 342


>gi|312885176|ref|ZP_07744856.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309367189|gb|EFP94761.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 377

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++            +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKDAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL+  + + T NP PW++  + 
Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLDAAYPEATSNPIPWINAWLS 342


>gi|91227184|ref|ZP_01261643.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           alginolyticus 12G01]
 gi|262393879|ref|YP_003285733.1| ribonucleotide reductase of class Ia (aerobic) subunit beta [Vibrio
           sp. Ex25]
 gi|269967067|ref|ZP_06181135.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           alginolyticus 40B]
 gi|91188712|gb|EAS75000.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           alginolyticus 12G01]
 gi|262337473|gb|ACY51268.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           sp. Ex25]
 gi|269828326|gb|EEZ82592.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           alginolyticus 40B]
          Length = 377

 Score =  103 bits (257), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +IN ++            +E +Q    +  EA   E  +A      G 
Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFTFMQIAEEAKQDCFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   + + T NP PW++  + 
Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATTNPIPWINAWLS 342


>gi|84386981|ref|ZP_00990005.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           splendidus 12B01]
 gi|86148466|ref|ZP_01066756.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp.
           MED222]
 gi|218709927|ref|YP_002417548.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           splendidus LGP32]
 gi|84378271|gb|EAP95130.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           splendidus 12B01]
 gi|85833763|gb|EAQ51931.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp.
           MED222]
 gi|218322946|emb|CAV19123.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           splendidus LGP32]
          Length = 377

 Score =  103 bits (257), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++            +E +Q+   +  EA   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFEFMQIAEECKQECFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   + + T NP PW++  + 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGTAYPEATSNPIPWINAWLS 342


>gi|328474726|gb|EGF45531.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           parahaemolyticus 10329]
          Length = 377

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +IN ++            +E +Q    +  EA   E  +A      G 
Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFSFMQIAEEAKQDCFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   + + T NP PW++  + 
Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATTNPIPWINAWLS 342


>gi|326782933|ref|YP_004323331.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-RSM4]
 gi|310004192|gb|ADO98586.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-RSM4]
          Length = 388

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVI-NQIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           RDES HL    +++ N  K ++  +    KE +     M       E  +A+    +G  
Sbjct: 248 RDESQHLVITQNILKNWAKGDDSEMAEIAKEEKPFVVDMFKRTVEEEKTWANYLFREGSM 307

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEKNF-FETRVT 114
           +GLN      Y+++IANRR   IGL+P+F      NP PW    ++ K ++N   ET + 
Sbjct: 308 IGLNDRLLHNYVEWIANRRMKAIGLDPVFDQVARNNPLPWTQHWLNSKGQQNAPQETEIE 367

Query: 115 EYQQGA 120
            Y  G 
Sbjct: 368 SYVVGG 373


>gi|260768282|ref|ZP_05877216.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           furnissii CIP 102972]
 gi|260616312|gb|EEX41497.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           furnissii CIP 102972]
 gi|315179989|gb|ADT86903.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio furnissii
           NCTC 11218]
          Length = 377

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN ++            +E +Q+   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMINLLRNGMDDFEFLQIAEECKQECFDLFKQAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL+  +   T NP PW++  + 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDAAYPSATTNPIPWINAWLS 342


>gi|291570484|dbj|BAI92756.1| ribonucleoside-diphosphate reductase beta chain [Arthrospira
           platensis NIES-39]
          Length = 123

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 13/126 (10%)

Query: 8   LNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQ 67
           +     +I +     PH      Q +   M   A   E  + +  +    +G+   S EQ
Sbjct: 1   MRLFQKIIPEAMAIFPH-----SQDRIYEMFDAAVQHECRWTNHIVGNNILGITEHSTEQ 55

Query: 68  YMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK----EKNFFETRVTEYQQGA 120
           Y +++AN R   IGLE L+   KY ++P+  +    D KK    + NFFE  VT Y   +
Sbjct: 56  YTKYLANIRLRSIGLESLYSDPKYQKSPYTHLERFSDTKKEAHTKANFFEASVTSYVMSS 115

Query: 121 ELK-WD 125
            +  WD
Sbjct: 116 GVSGWD 121


>gi|193062401|ref|ZP_03043496.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E22]
 gi|192932067|gb|EDV84666.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E22]
          Length = 393

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E + +   +  +A   E  +A      G 
Sbjct: 254 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKLECYDLFVQAAQQEKDWADYLFRDGS 313

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 314 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 373

Query: 116 Y 116
           Y
Sbjct: 374 Y 374


>gi|123441721|ref|YP_001005705.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122088682|emb|CAL11484.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 376

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F    NP PW+ S ++    +    E  V+ 
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGIPFNTRTNPIPWINSWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQIDSEVSAD 369


>gi|326783253|ref|YP_004323801.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn33]
 gi|310005200|gb|ADO99589.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn33]
          Length = 296

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVINQIKI-ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           RDES HL    +++N+ +  ++P +    KE Q    +M   A   E  +A      G  
Sbjct: 156 RDESQHLVLTQNILNKWRDGDDPEMDIIAKEEQSWVMSMFQRAVDEEKMWAEYLFKNGSM 215

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEKNF-FETRVT 114
           +GLN      Y+++IANRR   I ++P+F      NP PW    ++ K ++N   ET + 
Sbjct: 216 IGLNERLLHNYVEWIANRRMKAICIKPMFDIPAKNNPLPWTEHWLNSKGQQNAPQETEIE 275

Query: 115 EYQQGA 120
            Y  G 
Sbjct: 276 SYVIGG 281


>gi|163748931|ref|ZP_02156182.1| ribonucleotide-diphosphate reductase beta subunit [Shewanella
           benthica KT99]
 gi|161331307|gb|EDQ02195.1| ribonucleotide-diphosphate reductase beta subunit [Shewanella
           benthica KT99]
          Length = 376

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    ++  ++  +++P +    +E +Q +  +  +A   E  +A      G 
Sbjct: 237 RDEALHLNSTQHILKIMRAGVDDPEMGEIAEECEQLAYDIFVKAAEQEKEWAQYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
            +GLN     QY+++I N R   + L P +    NP PWM   +
Sbjct: 297 MIGLNEAILCQYVEYITNERMKSVNLTPHYDEITNPLPWMKNWL 340


>gi|12642668|gb|AAK00340.1| ribonucleotide reductase small subunit [Bovine herpesvirus 2]
          Length = 313

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 7/119 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N     +P    K    + R +  EA  +EIA+    MP+    L+
Sbjct: 192 RDEAVHTTASCCIYNNYIGAHP----KPPPTRVRQLFLEAVDIEIAFIRAKMPRDGQVLS 247

Query: 62  A---PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
                S E Y++F A+R    IG +PLF        +   ++   K  NFFE R T Y 
Sbjct: 248 ESAVASIENYVRFSADRLLCLIGDQPLFNAPPPDANFPLRLMSTDKHTNFFECRSTAYA 306


>gi|300717619|ref|YP_003742422.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           billingiae Eb661]
 gi|299063455|emb|CAX60575.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           billingiae Eb661]
          Length = 376

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E +Q+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGEDDPEMAEIARESRQECYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R H +GL+  FK   NP PW+ S ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYIEYITNIRMHAVGLDLPFKTRSNPIPWINSWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|170726650|ref|YP_001760676.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           woodyi ATCC 51908]
 gi|169811997|gb|ACA86581.1| Ribonucleoside-diphosphate reductase [Shewanella woodyi ATCC 51908]
          Length = 376

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +I  ++   ++P +    KE +Q++  +  +A   E  +A      G 
Sbjct: 237 RDEALHLNSTQHIIKLMQAGKDDPEMGEIAKECEQQAYDIFVKAAEQEKEWARYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
            +GLN     QY+++I N R   + L+  +    NP PWM   +
Sbjct: 297 MIGLNEQILCQYVEYITNERMKSVNLDLPYAQITNPLPWMKTWL 340


>gi|301156451|emb|CBW15922.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Haemophilus parainfluenzae T3T1]
          Length = 376

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQEKEWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F    NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFGARSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|152979144|ref|YP_001344773.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           succinogenes 130Z]
 gi|150840867|gb|ABR74838.1| Ribonucleoside-diphosphate reductase [Actinobacillus succinogenes
           130Z]
          Length = 376

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E A+A      G 
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFEARSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|325578589|ref|ZP_08148689.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           parainfluenzae ATCC 33392]
 gi|325159825|gb|EGC71955.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           parainfluenzae ATCC 33392]
          Length = 376

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQEKEWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F    NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFGARSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|238751211|ref|ZP_04612705.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           rohdei ATCC 43380]
 gi|238710485|gb|EEQ02709.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           rohdei ATCC 43380]
          Length = 399

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E  +A      G 
Sbjct: 260 RDEALHLTGTQHILNLMRSGEDDPEMAEIAVECQQQCYDLFVLAAEQEKEWAEYLFRDGS 319

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   FK   NP PW+ S ++    +    E  V+ 
Sbjct: 320 MIGLNKEILCQYVEYITNIRMQAVGLGTPFKTRTNPIPWINSWLVSDNVQVAPQEVEVSS 379

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 380 YLVGQIDSEISAD 392


>gi|254493923|ref|ZP_05107094.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae 1291]
 gi|260440303|ref|ZP_05794119.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae DGI2]
 gi|268594982|ref|ZP_06129149.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae 35/02]
 gi|268596639|ref|ZP_06130806.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae FA19]
 gi|268599210|ref|ZP_06133377.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae MS11]
 gi|268601557|ref|ZP_06135724.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID18]
 gi|268603896|ref|ZP_06138063.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID1]
 gi|268682359|ref|ZP_06149221.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID332]
 gi|268684517|ref|ZP_06151379.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae
           SK-92-679]
 gi|268686827|ref|ZP_06153689.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|291043595|ref|ZP_06569311.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae DGI2]
 gi|293398906|ref|ZP_06643071.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           gonorrhoeae F62]
 gi|59717937|gb|AAW89342.1| putative ribonucleoside diphosphate reductase I beta chain
           [Neisseria gonorrhoeae FA 1090]
 gi|226512963|gb|EEH62308.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae 1291]
 gi|268548371|gb|EEZ43789.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae 35/02]
 gi|268550427|gb|EEZ45446.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae FA19]
 gi|268583341|gb|EEZ48017.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae MS11]
 gi|268585688|gb|EEZ50364.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID18]
 gi|268588027|gb|EEZ52703.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID1]
 gi|268622643|gb|EEZ55043.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID332]
 gi|268624801|gb|EEZ57201.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae
           SK-92-679]
 gi|268627111|gb|EEZ59511.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|291012058|gb|EFE04047.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae DGI2]
 gi|291610320|gb|EFF39430.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           gonorrhoeae F62]
          Length = 384

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +     E Q +   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 349


>gi|161572976|ref|YP_207754.2| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae FA 1090]
 gi|194098862|ref|YP_002001926.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae NCCP11945]
 gi|239999147|ref|ZP_04719071.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae 35/02]
 gi|240013945|ref|ZP_04720858.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae DGI18]
 gi|240016387|ref|ZP_04722927.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae FA6140]
 gi|240080506|ref|ZP_04725049.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae FA19]
 gi|240113126|ref|ZP_04727616.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae MS11]
 gi|240115882|ref|ZP_04729944.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae PID18]
 gi|240118180|ref|ZP_04732242.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae PID1]
 gi|240121514|ref|ZP_04734476.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae PID24-1]
 gi|240123728|ref|ZP_04736684.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae PID332]
 gi|240125919|ref|ZP_04738805.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae SK-92-679]
 gi|240128431|ref|ZP_04741092.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae SK-93-1035]
 gi|193934152|gb|ACF29976.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae NCCP11945]
          Length = 377

 Score =  102 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +     E Q +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 342


>gi|149197800|ref|ZP_01874849.1| ribonucleotide-diphosphate reductase beta subunit [Lentisphaera
           araneosa HTCC2155]
 gi|149139021|gb|EDM27425.1| ribonucleotide-diphosphate reductase beta subunit [Lentisphaera
           araneosa HTCC2155]
          Length = 376

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 5/105 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +I   +   ++P +     E + +   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQQMIQIFREGKDDPEMAEIAAECEGQVYQIFSSAAEQEKEWAKFLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101
            +GLNA     Y+++I N R    G + +F  T+NP PWM+  + 
Sbjct: 297 MIGLNADILGDYVEYITNVRLKASGYKNVFPTTQNPLPWMNSWLS 341


>gi|149911236|ref|ZP_01899859.1| ribonucleotide-diphosphate reductase beta subunit [Moritella sp.
           PE36]
 gi|149805690|gb|EDM65689.1| ribonucleotide-diphosphate reductase beta subunit [Moritella sp.
           PE36]
          Length = 376

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +   + E  Q+++ +  +A   E  +A      G 
Sbjct: 237 RDEALHLTSTQHILNLMADGKDDPEMQEISIECFQETQKIFTDAAQQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN      Y+++I N R   +GL   F+   NP PW++  +I    +    E+ ++ 
Sbjct: 297 MIGLNKDILSDYIEYITNTRMAAVGLPKAFEVKSNPLPWINAWLISDNVQVAPQESEISS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|238785708|ref|ZP_04629683.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           bercovieri ATCC 43970]
 gi|238713393|gb|EEQ05430.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           bercovieri ATCC 43970]
          Length = 376

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E Q +   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLMRSGEDDPEMAEIAEECQSQCYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F    NP PW+ S ++    +    E  V+ 
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGVPFNTRSNPIPWINSWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQIDSEISAD 369


>gi|309379219|emb|CBX22176.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 384

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    +E Q++   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDPEMAEIAEELQEECFKLFKKAAEQEKEWAAYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 349


>gi|217973230|ref|YP_002357981.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           baltica OS223]
 gi|304408853|ref|ZP_07390474.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS183]
 gi|307302856|ref|ZP_07582611.1| Ribonucleoside-diphosphate reductase [Shewanella baltica BA175]
 gi|217498365|gb|ACK46558.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS223]
 gi|304352674|gb|EFM17071.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS183]
 gi|306913216|gb|EFN43638.1| Ribonucleoside-diphosphate reductase [Shewanella baltica BA175]
 gi|315267707|gb|ADT94560.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS678]
          Length = 376

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +++ ++   ++P +     E QQ++  +  +A   E  +A      G 
Sbjct: 237 RDEALHLNSTQHILSIMQGGKDDPEMGEIAAECQQEAFDLFFKAAEQEKEWAKYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
            +GLN     QY++FI N+R   + L   +    NP PWM   +
Sbjct: 297 MIGLNEQILCQYVEFITNQRMKSVNLPQPYPEITNPLPWMKNWL 340


>gi|153000811|ref|YP_001366492.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           baltica OS185]
 gi|160875520|ref|YP_001554836.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           baltica OS195]
 gi|151365429|gb|ABS08429.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS185]
 gi|160861042|gb|ABX49576.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS195]
          Length = 386

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +++ ++   ++P +     E QQ++  +  +A   E  +A      G 
Sbjct: 247 RDEALHLNSTQHILSIMQGGKDDPEMGEIAAECQQEAFDLFFKAAEQEKEWAKYLFKDGS 306

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
            +GLN     QY++FI N+R   + L   +    NP PWM   +
Sbjct: 307 MIGLNEQILCQYVEFITNQRMKSVNLPQPYPEITNPLPWMKNWL 350


>gi|269139684|ref|YP_003296385.1| ribonucleotide reductase, beta subunit [Edwardsiella tarda EIB202]
 gi|267985345|gb|ACY85174.1| ribonucleotide reductase, beta subunit [Edwardsiella tarda EIB202]
 gi|304559553|gb|ADM42217.1| Ribonucleotide reductase of class Ia, beta subunit [Edwardsiella
           tarda FL6-60]
          Length = 376

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E + +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLMRSGQDDPEMAEIAAECEDQCYDLFVQAAQQEKEWAGYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNRDILCQYVEYITNIRMQAVGLSLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|308187586|ref|YP_003931717.1| ribonucleoside-diphosphate reductase 1 beta chain [Pantoea vagans
           C9-1]
 gi|308058096|gb|ADO10268.1| ribonucleoside-diphosphate reductase 1 beta chain [Pantoea vagans
           C9-1]
          Length = 376

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E +++   +  +A L E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGEDDPEMKEIAAECREECFELFKKAALQEKEWAEYLFSGGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW+ S ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLDLPFQTRSNPIPWINSWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|304398198|ref|ZP_07380072.1| ribonucleotide reductase [Pantoea sp. aB]
 gi|304354064|gb|EFM18437.1| ribonucleotide reductase [Pantoea sp. aB]
          Length = 376

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E +++   +  +A L E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLLRSGEDDPEMKEIAAECREECFELFKKAALQEKEWAEYLFSGGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW+ S ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLDLPFQTRSNPIPWINSWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|238788616|ref|ZP_04632408.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           frederiksenii ATCC 33641]
 gi|238723211|gb|EEQ14859.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           frederiksenii ATCC 33641]
          Length = 383

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 244 RDEALHLTGTQHILNLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F    NP PW+ S ++    +    E  V+ 
Sbjct: 304 MIGLNKEILCQYVEYITNIRMQAVGLGIPFNTRTNPIPWINSWLVSDNVQVAPQEVEVSS 363

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 364 YLVGQIDSEVSAD 376


>gi|254230294|ref|ZP_04923683.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio sp.
           Ex25]
 gi|151937191|gb|EDN56060.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio sp.
           Ex25]
          Length = 242

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +IN ++            +E +Q    +  EA   E  +A      G 
Sbjct: 102 RDEALHLNGTQHMINLLRNGQDDFTFMQIAEEAKQDCFDLFKEAAEQEKEWAEYLFKDGS 161

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   + + T NP PW++  + 
Sbjct: 162 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATTNPIPWINAWLS 207


>gi|332290530|ref|YP_004421382.1| ribonucleotide-diphosphate reductase subunit beta [Gallibacterium
           anatis UMN179]
 gi|330433426|gb|AEC18485.1| ribonucleotide-diphosphate reductase subunit beta [Gallibacterium
           anatis UMN179]
          Length = 376

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E QQ++  +   A   E  +A+     G 
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECQQEAYDLFVAAAEQEKEWANYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F    NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFTTRSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|326784253|ref|YP_004324793.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM5]
 gi|310003484|gb|ADO97880.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM5]
          Length = 388

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVINQIKI-ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           RDES HL    +++ + K  ++P +    KE +   + M       E  +A     +G  
Sbjct: 248 RDESQHLVITQNILRKWKEGDDPEMKEIAKEEKGWVQHMFERTVNEEKVWADYLFKQGSM 307

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEKNF-FETRVT 114
           +GLN      Y+++IANRR   IGL+P+F      NP PW    ++ K ++N   ET + 
Sbjct: 308 IGLNDRLLHNYVEWIANRRMKSIGLDPMFDIPAKNNPLPWTEHWLNSKGQQNAPQETEIE 367

Query: 115 EYQQGA 120
            Y  G 
Sbjct: 368 SYVVGG 373


>gi|238753722|ref|ZP_04615083.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           ruckeri ATCC 29473]
 gi|238707958|gb|EEQ00315.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           ruckeri ATCC 29473]
          Length = 376

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLMRSGEDDPEMAEIAVECQQQCYDLFVLAAEQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   FK   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGTPFKTRTNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQIDSEISAD 369


>gi|332534563|ref|ZP_08410398.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035983|gb|EGI72462.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 376

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL+    ++N ++   ++P +     + + ++  M  +A   E  +A      G 
Sbjct: 237 RDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCRDEAIKMFVDAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   IGL   F+   NP PW+ S ++    +    E  ++ 
Sbjct: 297 MIGLNKHILCQYVEYITNARMTAIGLPAQFENNSNPIPWINSWLVSDNVQVAPQEAEISS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|269963956|ref|ZP_06178265.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio harveyi
           1DA3]
 gi|269831299|gb|EEZ85449.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio harveyi
           1DA3]
          Length = 377

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +IN ++            +E +Q    +  EA   E  +A      G 
Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFTFMQIAEEAKQDCFDLFKEAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   + + T NP PW++  + 
Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPMAYPEATSNPIPWINAWLS 342


>gi|315126539|ref|YP_004068542.1| ribonucleotide-diphosphate reductase subunit beta
           [Pseudoalteromonas sp. SM9913]
 gi|315015053|gb|ADT68391.1| ribonucleotide-diphosphate reductase subunit beta
           [Pseudoalteromonas sp. SM9913]
          Length = 376

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL+    ++N ++   ++P +     + ++++  M  +A   E  +A      G 
Sbjct: 237 RDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCREEAIKMFVDAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   IGL   F    NP PW+ S ++    +    E  ++ 
Sbjct: 297 MIGLNKHILCQYVEYITNARMTAIGLPAQFDNNSNPIPWINSWLVSDNVQVAPQEAEISS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|113970253|ref|YP_734046.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp.
           MR-4]
 gi|114047558|ref|YP_738108.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp.
           MR-7]
 gi|113884937|gb|ABI38989.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella sp. MR-4]
 gi|113889000|gb|ABI43051.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella sp. MR-7]
          Length = 376

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDV--INQIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +  I Q   ++P +     E QQ++  +  +A   E  +A      G 
Sbjct: 237 RDEALHLNSTQHILTIMQAGKDDPEMGEIAAECQQEAYNLFLKAAEQEKEWAKYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
            +GLN     QY+++I N+R   + L   +    NP PWM   +
Sbjct: 297 MIGLNEQILCQYVEYITNQRMKSVNLPQPYAEQSNPLPWMKNWL 340


>gi|212635281|ref|YP_002311806.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           piezotolerans WP3]
 gi|212556765|gb|ACJ29219.1| Ribonucleoside-diphosphate reductase, beta subunit [Shewanella
           piezotolerans WP3]
          Length = 376

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    ++       ++P +    KE +Q +  +  +A   E  +A      G 
Sbjct: 237 RDEALHLNSTQHILKIMHAGKDDPEMAEIAKECEQTAIDIFVKAAEQEKEWAKYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
            +GLN     QY+++I N R   + LE  +    NP PWM   +
Sbjct: 297 MIGLNEQILCQYVEYITNERMKAVNLESPYAEQSNPLPWMKNWL 340


>gi|237747538|ref|ZP_04578018.1| ribonucleotide-diphosphate reductase subunit beta [Oxalobacter
           formigenes OXCC13]
 gi|229378900|gb|EEO28991.1| ribonucleotide-diphosphate reductase subunit beta [Oxalobacter
           formigenes OXCC13]
          Length = 376

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    KE +++S  +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMGSGEDDPDMAEIAKECREQSIDLFVRAAEQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +G+   F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNRDILCQYVEYITNTRMQAVGMPLPFEIRSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|21959884|gb|AAM86526.1|AE013899_3 ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Yersinia
           pestis KIM 10]
 gi|45435621|gb|AAS61179.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Microtus str. 91001]
          Length = 391

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +++  ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 252 RDEALHLTGTQHILNLMRLGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 311

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F    NP PW+ S ++    +    E  V+ 
Sbjct: 312 MIGLNKEILCQYVEYITNIRMQAVGLGIPFSTRTNPIPWINSWLVSDNVQVAPQEVEVSS 371

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 372 YLVGQIDSEVSAD 384


>gi|148825799|ref|YP_001290552.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae PittEE]
 gi|148715959|gb|ABQ98169.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae PittEE]
          Length = 376

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E A+A      G 
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|113461104|ref|YP_719172.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           somnus 129PT]
 gi|170717681|ref|YP_001784756.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           somnus 2336]
 gi|112823147|gb|ABI25236.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Haemophilus somnus 129PT]
 gi|168825810|gb|ACA31181.1| Ribonucleoside-diphosphate reductase [Haemophilus somnus 2336]
          Length = 376

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYELFVAAAEQEKEWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|261493906|ref|ZP_05990416.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
 gi|261495801|ref|ZP_05992236.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261308535|gb|EEY09803.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261310439|gb|EEY11632.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
          Length = 376

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N      ++P +    +E +Q++  +   A   E A+A      G 
Sbjct: 237 RDEALHLTGTQHILNIMTYGNDDPEMAEIARECRQEAYELFLSAAEQEKAWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   FK   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNRDILVQYIEYITNIRMQAVGLPLPFKARSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|145633337|ref|ZP_01789068.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           influenzae 3655]
 gi|144986183|gb|EDJ92773.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           influenzae 3655]
          Length = 376

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E A+A      G 
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|119472403|ref|ZP_01614521.1| ribonucleotide-diphosphate reductase beta subunit [Alteromonadales
           bacterium TW-7]
 gi|119444925|gb|EAW26223.1| ribonucleotide-diphosphate reductase beta subunit [Alteromonadales
           bacterium TW-7]
          Length = 376

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL+    ++N ++   ++P +     + + ++  M  +A   E  +A      G 
Sbjct: 237 RDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCRDEAIKMFVQAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   IGL   F+   NP PW+ S ++    +    E  ++ 
Sbjct: 297 MIGLNKHILCQYVEYITNARMTAIGLPAQFENNSNPIPWINSWLVSDNVQVAPQEAEISS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|114563305|ref|YP_750818.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           frigidimarina NCIMB 400]
 gi|114334598|gb|ABI71980.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella frigidimarina NCIMB 400]
          Length = 376

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    ++  ++   ++P +     E +Q++  +  +A   E  +A      G 
Sbjct: 237 RDEALHLNSTQHILALMQGGKDDPEMGEIAAECKQEAYDLFVKAAEQEKEWAKYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
            +GLN     QY++FI N+R   + L   +    NP PWM   +
Sbjct: 297 MIGLNEQILCQYVEFITNQRMKSVHLPQPYDEQSNPLPWMKNWL 340


>gi|261400675|ref|ZP_05986800.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           lactamica ATCC 23970]
 gi|269209585|gb|EEZ76040.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           lactamica ATCC 23970]
          Length = 377

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +     E Q +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTSTQHMLNLMRSGVDDPEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 342


>gi|51595597|ref|YP_069788.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis IP 32953]
 gi|108806924|ref|YP_650840.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Antiqua]
 gi|108812924|ref|YP_648691.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Nepal516]
 gi|145599749|ref|YP_001163825.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Pestoides F]
 gi|149366796|ref|ZP_01888830.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           CA88-4125]
 gi|153950490|ref|YP_001401734.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis IP 31758]
 gi|161484771|ref|NP_670275.2| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           KIM 10]
 gi|161511422|ref|NP_992302.2| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           biovar Microtus str. 91001]
 gi|162418296|ref|YP_001605847.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Angola]
 gi|165924721|ref|ZP_02220553.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165938305|ref|ZP_02226863.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166009974|ref|ZP_02230872.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166211802|ref|ZP_02237837.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167400353|ref|ZP_02305866.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167419574|ref|ZP_02311327.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167424117|ref|ZP_02315870.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167470792|ref|ZP_02335496.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           FV-1]
 gi|170025073|ref|YP_001721578.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis YPIII]
 gi|186894660|ref|YP_001871772.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis PB1/+]
 gi|218928372|ref|YP_002346247.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           CO92]
 gi|229841157|ref|ZP_04461316.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229843262|ref|ZP_04463408.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229894122|ref|ZP_04509308.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           Pestoides A]
 gi|229903354|ref|ZP_04518467.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           Nepal516]
 gi|270487164|ref|ZP_06204238.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           KIM D27]
 gi|294503227|ref|YP_003567289.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           Z176003]
 gi|51588879|emb|CAH20493.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia
           pseudotuberculosis IP 32953]
 gi|108776572|gb|ABG19091.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Yersinia pestis Nepal516]
 gi|108778837|gb|ABG12895.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Yersinia pestis Antiqua]
 gi|115346983|emb|CAL19874.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           CO92]
 gi|145211445|gb|ABP40852.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Yersinia pestis Pestoides F]
 gi|149291170|gb|EDM41245.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           CA88-4125]
 gi|152961985|gb|ABS49446.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia
           pseudotuberculosis IP 31758]
 gi|162351111|gb|ABX85059.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           Angola]
 gi|165913683|gb|EDR32302.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165923781|gb|EDR40913.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165991370|gb|EDR43671.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166207573|gb|EDR52053.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166962315|gb|EDR58336.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167050302|gb|EDR61710.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167056966|gb|EDR66729.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169751607|gb|ACA69125.1| Ribonucleoside-diphosphate reductase [Yersinia pseudotuberculosis
           YPIII]
 gi|186697686|gb|ACC88315.1| ribonucleotide reductase [Yersinia pseudotuberculosis PB1/+]
 gi|229679124|gb|EEO75227.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           Nepal516]
 gi|229689609|gb|EEO81670.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229697523|gb|EEO87570.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229704007|gb|EEO91020.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           Pestoides A]
 gi|262361266|gb|ACY57987.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           D106004]
 gi|262365197|gb|ACY61754.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           D182038]
 gi|270335668|gb|EFA46445.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           KIM D27]
 gi|294353686|gb|ADE64027.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           Z176003]
 gi|320015945|gb|ADV99516.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 376

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +++  ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLMRLGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F    NP PW+ S ++    +    E  V+ 
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGIPFSTRTNPIPWINSWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQIDSEVSAD 369


>gi|119774862|ref|YP_927602.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           amazonensis SB2B]
 gi|119767362|gb|ABL99932.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella amazonensis SB2B]
          Length = 391

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    ++N ++   ++  +     E QQ++  +   A   E  +A      G 
Sbjct: 252 RDEALHLNSTQHILNIMQGGKDDAEMAEIAIECQQEAYDLFLRAAEQEKEWAKYLFKDGS 311

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
            +GLN     QY+++I N+R   + L   +  + NP PWM   +
Sbjct: 312 MIGLNEQILCQYVEYITNQRMKSVNLPLPYPESTNPLPWMKNWL 355


>gi|126658748|ref|ZP_01729893.1| hypothetical protein CY0110_32340 [Cyanothece sp. CCY0110]
 gi|126620010|gb|EAZ90734.1| hypothetical protein CY0110_32340 [Cyanothece sp. CCY0110]
          Length = 347

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 9/127 (7%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DE  H++    +I +   +  +      + +   + H     EI + +       +G++ 
Sbjct: 222 DELTHVSLYQKLITEATTKFSY-----SEDEITELFHTTVEREIEWTNHIFDGQILGVSK 276

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENP---FPWMSEVIDLKKEKNFFETRVTEYQQG 119
            S E Y +++AN R   IG+  ++   ENP     W       K +  FFET VT Y Q 
Sbjct: 277 ASTEAYTKYLANLRLKAIGIPAIYPKIENPYAHLDWADFKGIGKSKAAFFETEVTGYAQP 336

Query: 120 AELK-WD 125
             +K WD
Sbjct: 337 TAVKGWD 343


>gi|88859281|ref|ZP_01133921.1| ribonucleotide-diphosphate reductase beta subunit
           [Pseudoalteromonas tunicata D2]
 gi|88818298|gb|EAR28113.1| ribonucleotide-diphosphate reductase beta subunit
           [Pseudoalteromonas tunicata D2]
          Length = 376

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL+    ++N ++   ++P +     + +++S  M   A   E  +A      G 
Sbjct: 237 RDEALHLSGTQHMLNIMQDGQDDPEMAIVAAQLREESIEMFRTAAQQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F  T NP PW+ S ++    +    E  ++ 
Sbjct: 297 MIGLNKDILCQYVEYITNVRMSAVGLPQQFSITSNPIPWINSWLVSDNVQVAPQEAEISS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|16273547|ref|NP_439802.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae Rd KW20]
 gi|68250262|ref|YP_249374.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 86-028NP]
 gi|145629252|ref|ZP_01785051.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 22.1-21]
 gi|145631490|ref|ZP_01787259.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae R3021]
 gi|145639184|ref|ZP_01794791.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae PittII]
 gi|145641092|ref|ZP_01796673.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae R3021]
 gi|260581255|ref|ZP_05849073.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus
           influenzae RdAW]
 gi|260582634|ref|ZP_05850423.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus
           influenzae NT127]
 gi|319776092|ref|YP_004138580.1| ribonucleoside-diphosphate reductase subunit beta [Haemophilus
           influenzae F3047]
 gi|319896901|ref|YP_004135096.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus
           influenzae F3031]
 gi|329123256|ref|ZP_08251824.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           aegyptius ATCC 11116]
 gi|1172943|sp|P43755|RIR2_HAEIN RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|1574510|gb|AAC23306.1| ribonucleoside diphosphate reductase, beta chain (nrdB)
           [Haemophilus influenzae Rd KW20]
 gi|68058461|gb|AAX88714.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus
           influenzae 86-028NP]
 gi|144978755|gb|EDJ88478.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 22.1-21]
 gi|144982920|gb|EDJ90433.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae R3021]
 gi|145271746|gb|EDK11656.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae PittII]
 gi|145274253|gb|EDK14118.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 22.4-21]
 gi|260092082|gb|EEW76027.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus
           influenzae RdAW]
 gi|260094306|gb|EEW78205.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus
           influenzae NT127]
 gi|301170418|emb|CBW30024.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Haemophilus influenzae 10810]
 gi|309750762|gb|ADO80746.1| Ribonucleoside diphosphate reductase 1, beta subunit [Haemophilus
           influenzae R2866]
 gi|309972945|gb|ADO96146.1| Ribonucleoside diphosphate reductase 1, beta subunit [Haemophilus
           influenzae R2846]
 gi|317432405|emb|CBY80760.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus
           influenzae F3031]
 gi|317450683|emb|CBY86903.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus
           influenzae F3047]
 gi|327471465|gb|EGF16913.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           aegyptius ATCC 11116]
          Length = 376

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E A+A      G 
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|238920521|ref|YP_002934036.1| ribonucleotide-diphosphate reductase subunit beta [Edwardsiella
           ictaluri 93-146]
 gi|238870090|gb|ACR69801.1| ribonucleoside-diphosphate reductase, beta subunit, putative
           [Edwardsiella ictaluri 93-146]
          Length = 376

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E   +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLMRAGQDDPEMAEIATECASQCYDLFVQAAQQEKEWAGYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNRDILCQYVEYITNIRMQAVGLPLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|317164437|gb|ADV07978.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae TCDC-NG08107]
          Length = 377

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +     E Q +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLSAGFEGANQNPIPWINAWLS 342


>gi|59711808|ref|YP_204584.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio fischeri
           ES114]
 gi|197336251|ref|YP_002156001.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio fischeri
           MJ11]
 gi|59479909|gb|AAW85696.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Vibrio fischeri ES114]
 gi|197317741|gb|ACH67188.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio fischeri
           MJ11]
          Length = 377

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDESLHL     ++N ++   ++P       E +Q+   +   A   E  +A+     G 
Sbjct: 237 RDESLHLTSTQHMLNLLRTGQDDPEFVEIAAECEQECFDLFKAAAEQEKQWANYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   ++  T+NP PW++  + 
Sbjct: 297 MIGLNKDILCQYVEYITNLRMKAVGLNSAYEGATQNPIPWINSWLS 342


>gi|116326775|ref|YP_803312.1| hypothetical protein TNAV2c_gp089 [Trichoplusia ni ascovirus 2c]
 gi|102231783|gb|ABF70606.1| hypothetical protein [Trichoplusia ni ascovirus 2c]
          Length = 269

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 8/92 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N       ++  K    +   +L EA ++E  +  + +P   +G+N
Sbjct: 172 RDEGLHTDFACLMYN-------YVVQKPPNSRVIEILKEAVVIEKDFLTDALPVRLLGMN 224

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPF 93
                QY++F+A+R  +++  E  +   +NP 
Sbjct: 225 CDLMSQYIEFVADRLLYELIGEKYYN-AKNPI 255


>gi|254361270|ref|ZP_04977413.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           PHL213]
 gi|153092766|gb|EDN73809.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           PHL213]
          Length = 376

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N      ++P +    +E +Q++  +   A   E A+A      G 
Sbjct: 237 RDEALHLTGTQHILNIMAYGNDDPEMAEIARECRQEAYELFLSAAEQEKAWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   FK   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNRDILVQYIEYITNIRMQAVGLPLPFKARSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|329119976|ref|ZP_08248648.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           bacilliformis ATCC BAA-1200]
 gi|327463889|gb|EGF10203.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           bacilliformis ATCC BAA-1200]
          Length = 384

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTSTQHMLNLMRAGADDPEMAEIAVELQDECFKLFKKAAEQEKEWAAYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL+P F  + +NP PW++  + 
Sbjct: 304 MIGLNKDILCQYVEYITNHRMIAVGLDPAFPASNQNPIPWINAWLS 349


>gi|76875271|emb|CAI86492.1| ribonucleoside-diphosphate reductase 1, beta subunit
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 359

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL+    ++N ++   ++P +     + + ++  M  +A   E  +A      G 
Sbjct: 220 RDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCRDEAIKMFVDAAEQEKEWAEYLFKDGS 279

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   IG    FK   NP PW+ S ++    +    E  ++ 
Sbjct: 280 MIGLNKHILCQYVEYITNARMTAIGFPAQFKNNSNPIPWINSWLVSDNVQVAPQEAEISS 339

Query: 116 Y 116
           Y
Sbjct: 340 Y 340


>gi|317492553|ref|ZP_07950980.1| ribonucleotide reductase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919303|gb|EFV40635.1| ribonucleotide reductase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 376

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E +Q+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLMRSGQDDPEMAEVAVECEQQCYDLFVLAAEQEKEWADYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLKLPFQTRSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|15602584|ref|NP_245656.1| ribonucleotide-diphosphate reductase subunit beta [Pasteurella
           multocida subsp. multocida str. Pm70]
 gi|12721013|gb|AAK02803.1| NrdB [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 376

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNIMASGQDDPEMAEIVEECKQEAYDLFVAAAEQEKEWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|313668429|ref|YP_004048713.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           lactamica ST-640]
 gi|313005891|emb|CBN87347.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           lactamica 020-06]
          Length = 377

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +     E Q +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFRLFKKAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 342


>gi|52425023|ref|YP_088160.1| ribonucleotide-diphosphate reductase subunit beta [Mannheimia
           succiniciproducens MBEL55E]
 gi|52307075|gb|AAU37575.1| NrdF protein [Mannheimia succiniciproducens MBEL55E]
          Length = 376

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E A+A      G 
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQEKAWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
            +GLN     QY+++I N R   +GL   F+   NP PW++  +
Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWINAWL 340


>gi|58532963|ref|YP_195186.1| ribonucleotide reductase A subunit [Synechococcus phage S-PM2]
 gi|58331430|emb|CAF34216.1| ribonucleotide reductase A subunit [Synechococcus phage S-PM2]
          Length = 394

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVINQIKI-ENPHLWTKEFQQK--SRTMLHEATLLEIAYAHETMPKG-F 57
           RDES H+    ++IN+ K  ++P +     Q++     M  +    EI +A      G  
Sbjct: 254 RDESQHMTITQNIINKWKAGDDPDMVEIAKQEENNVYDMFKKCVEEEIIWADYLFRDGSM 313

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114
           +GLNA   ++Y+++ ANRR   IG++ +F    + NP PW    +  K  +    ET V 
Sbjct: 314 IGLNAKLLQKYVEWTANRRMKAIGMKQIFDVPLSNNPLPWTEHWLSSKGLQVAPQETEVE 373

Query: 115 EYQQGA 120
            Y  G 
Sbjct: 374 SYVIGG 379


>gi|85059563|ref|YP_455265.1| ribonucleotide-diphosphate reductase subunit beta [Sodalis
           glossinidius str. 'morsitans']
 gi|84780083|dbj|BAE74860.1| ribonucleoside-diphosphate reductase 1 beta subunit [Sodalis
           glossinidius str. 'morsitans']
          Length = 376

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E QQ+S  +   A   E  +A      G 
Sbjct: 237 RDEALHLTSTQHMLNLMRSGEDDPEMAEIARECQQESYDLFLLAAQQEKEWASYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F    NP PW+ S ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQSVGLDLPFATRSNPIPWINSWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|320538993|ref|ZP_08038668.1| putative ribonucleoside diphosphate reductase 1, beta subunit,
           ferritin-like protein [Serratia symbiotica str. Tucson]
 gi|320030926|gb|EFW12930.1| putative ribonucleoside diphosphate reductase 1, beta subunit,
           ferritin-like protein [Serratia symbiotica str. Tucson]
          Length = 376

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGADDPEMAEIAVECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I+N R   +GLE  FK   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYISNIRMQAVGLELPFKTRSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|269213593|ref|ZP_05982340.2| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           cinerea ATCC 14685]
 gi|269146056|gb|EEZ72474.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           cinerea ATCC 14685]
          Length = 377

 Score =  100 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++P +    +E Q++   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTSTQHMLNLMRSGVDDPEMAEIAEELQEECFKLFKKAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPIGFEGANQNPIPWINAWLS 342


>gi|162139926|ref|YP_339935.2| ribonucleotide-diphosphate reductase subunit beta
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 376

 Score =  100 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL+    ++N ++   ++P +     + + ++  M  +A   E  +A      G 
Sbjct: 237 RDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCRDEAIKMFVDAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   IG    FK   NP PW+ S ++    +    E  ++ 
Sbjct: 297 MIGLNKHILCQYVEYITNARMTAIGFPAQFKNNSNPIPWINSWLVSDNVQVAPQEAEISS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|51557509|ref|YP_068343.1| ribonucleotide reductase subunit 2 [Suid herpesvirus 1]
 gi|1710400|sp|P50645|RIR2_SUHVK RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|437737|emb|CAA50977.1| ribonucleotide reductase [Suid herpesvirus 1]
 gi|525265|emb|CAA56776.1| ribonucleotid reductase, small subunit [Suid herpesvirus 1]
 gi|40253968|tpg|DAA02163.1| TPA_exp: small subunit of ribonucleotide reductase [Suid
           herpesvirus 1]
 gi|1090510|prf||2019240B ribonucleotide reductase:SUBUNIT=small
          Length = 303

 Score =  100 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 4/115 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H +    + N    + P    +  + +   +  EA  +E  +     P+  + L+
Sbjct: 185 RDEAIHTSASCCIYNNYLGDAP----RPDEARIHQLFAEAVEIECEFLRARAPRDSLLLD 240

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
            P+   Y+++ A+R    IG  PLF        +   ++  +K  NFFE R T Y
Sbjct: 241 LPAIISYVRYSADRLLQAIGASPLFGAPAPAADFPMALMVAEKHTNFFERRSTNY 295


>gi|326784150|ref|YP_004324543.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn1]
 gi|310004882|gb|ADO99273.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn1]
          Length = 395

 Score =  100 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 7/126 (5%)

Query: 2   RDESLHLNFGIDVINQIKI-ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           RDES H+    +++N+ K  ++P +    +E ++    M ++    E+ +A      G  
Sbjct: 255 RDESQHMTITQNILNKWKQGDDPDMVEIAQEEEKNVYEMFNKCVEEEVIWADYLFRDGSM 314

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEKNF-FETRVT 114
           +GLNA   ++Y+++ ANRR   IGL+P F    + NP PW    +  +  +    ET V 
Sbjct: 315 IGLNAKLLQKYVEWTANRRMKSIGLKPTFDAPLSNNPLPWTEHWLSSRGLQVAPQETEVE 374

Query: 115 EYQQGA 120
            Y  G 
Sbjct: 375 SYVIGG 380


>gi|261364564|ref|ZP_05977447.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           mucosa ATCC 25996]
 gi|288567131|gb|EFC88691.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           mucosa ATCC 25996]
          Length = 384

 Score =  100 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTSTQHMLNLMRAGSDDPEMAEIAVELQDECFELFKKAAEQEKEWAAYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   F+  T+NP PW++  + 
Sbjct: 304 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLS 349


>gi|4389291|pdb|1BIQ|A Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain Mutant
           E238a
          Length = 375

 Score =  100 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RD +LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDAALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 356 YLVGQIDSEVDTD 368


>gi|294140834|ref|YP_003556812.1| ribonucleoside-diphosphate reductase subunit beta [Shewanella
           violacea DSS12]
 gi|293327303|dbj|BAJ02034.1| ribonucleoside-diphosphate reductase, beta subunit [Shewanella
           violacea DSS12]
          Length = 376

 Score =  100 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    ++  ++   ++P +    KE +Q +  +  +A   E  +A      G 
Sbjct: 237 RDEALHLNSTQHILKIMRAGADDPEMGEIAKECEQLAYDIFVKAAEQEKEWAQYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
            +GLN     QY+++I N R   + L   +    NP PWM   +
Sbjct: 297 MIGLNQAILCQYVEYITNERMKSVNLPCHYDEITNPLPWMKNWL 340


>gi|293392273|ref|ZP_06636607.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290952807|gb|EFE02926.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 376

 Score =  100 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAKIAEECKQEAYDLFLAAAEQEKDWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|238760194|ref|ZP_04621340.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           aldovae ATCC 35236]
 gi|238701573|gb|EEP94144.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           aldovae ATCC 35236]
          Length = 376

 Score =  100 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLMRAGEDDPEMAEIAIECQQQCYDLFVLAAEQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F    NP PW+ S ++    +    E  V+ 
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGIPFATRTNPIPWINSWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQIDSEISAD 369


>gi|319638203|ref|ZP_07992966.1| ribonucleoside diphosphate reductase subunit I beta [Neisseria
           mucosa C102]
 gi|317400476|gb|EFV81134.1| ribonucleoside diphosphate reductase subunit I beta [Neisseria
           mucosa C102]
          Length = 384

 Score =  100 bits (250), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTSTQHMLNLMRAGADDPEMAEIANELQDECFNLFKKAAEQEKEWAAYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   F+  T+NP PW++  + 
Sbjct: 304 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLS 349


>gi|4389292|pdb|1BIQ|B Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain Mutant
           E238a
 gi|40889714|pdb|1RSV|A Chain A, Azide Complex Of The Diferrous E238a Mutant R2 Subunit Of
           Ribonucleotide Reductase
 gi|40889715|pdb|1RSV|B Chain B, Azide Complex Of The Diferrous E238a Mutant R2 Subunit Of
           Ribonucleotide Reductase
          Length = 375

 Score =  100 bits (250), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RD +LHL     ++N ++   ++P +    +E +Q+   +  +A   E  +A      G 
Sbjct: 236 RDAALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 356 YLVGQIDSEVDTD 368


>gi|167623961|ref|YP_001674255.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           halifaxensis HAW-EB4]
 gi|167353983|gb|ABZ76596.1| Ribonucleoside-diphosphate reductase [Shewanella halifaxensis
           HAW-EB4]
          Length = 376

 Score =  100 bits (250), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    ++  ++   ++P +    KE +Q +  +  +A   E  +A      G 
Sbjct: 237 RDEALHLNSTQHILKIMQGGKDDPEMAEIAKECEQTAIDIFVKAAEQEKEWAKYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
            +GLN     QY+++I N R   +     +    NP PWM   ++    +    E  V+ 
Sbjct: 297 MIGLNETILCQYVEYITNERMKSVNFASPYAEQTNPLPWMKNWLESDSVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  + +  D
Sbjct: 357 YLVGQIDSSIDDD 369


>gi|157371509|ref|YP_001479498.1| ribonucleotide-diphosphate reductase subunit beta [Serratia
           proteamaculans 568]
 gi|157323273|gb|ABV42370.1| Ribonucleoside-diphosphate reductase [Serratia proteamaculans 568]
          Length = 376

 Score =  100 bits (250), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGADDPEMAEIAVECQQQCYDLFVLAAEQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F    NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGLPFATRSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|261867684|ref|YP_003255606.1| ribonucleotide-diphosphate reductase subunit beta [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413016|gb|ACX82387.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 376

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQEKDWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|294637129|ref|ZP_06715438.1| ribonucleoside-diphosphate reductase, beta subunit [Edwardsiella
           tarda ATCC 23685]
 gi|291089663|gb|EFE22224.1| ribonucleoside-diphosphate reductase, beta subunit [Edwardsiella
           tarda ATCC 23685]
          Length = 376

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E + +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLMRSGQDDPEMAEIAAECETQCYDLFVQAAQQEKDWASYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNRDILCQYVEYITNIRMQAVGLSLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|284799957|ref|ZP_05985309.2| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           subflava NJ9703]
 gi|284796454|gb|EFC51801.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           subflava NJ9703]
          Length = 377

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTSTQHMLNLMRAGADDPEMAEIANELQDECFNLFKKAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   F+  T+NP PW++  + 
Sbjct: 297 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLS 342


>gi|260913913|ref|ZP_05920387.1| ribonucleoside-diphosphate reductase [Pasteurella dagmatis ATCC
           43325]
 gi|260632000|gb|EEX50177.1| ribonucleoside-diphosphate reductase [Pasteurella dagmatis ATCC
           43325]
          Length = 376

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNIMASGQDDPEMAEIVEECKQEAYDLFVAAAEQEKEWASYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|145634465|ref|ZP_01790175.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           influenzae PittAA]
 gi|229845068|ref|ZP_04465204.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 6P18H1]
 gi|229846892|ref|ZP_04466999.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 7P49H1]
 gi|145268445|gb|EDK08439.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           influenzae PittAA]
 gi|229810381|gb|EEP46100.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 7P49H1]
 gi|229812040|gb|EEP47733.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 6P18H1]
          Length = 376

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +      L      +E +Q++  +   A   E A+A      G 
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDLEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|9629745|ref|NP_045237.1| ribonucleotide reductase subunit 2 [Equid herpesvirus 4]
 gi|2605963|gb|AAC59535.1| 20 [Equid herpesvirus 4]
          Length = 320

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 4/116 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H N    + N         + K    +   +  EA  +E  +     PK    L+
Sbjct: 202 RDEAIHTNASCCIYNNYLGG----FEKPAPTRIYALFSEAVNIECEFLLSHAPKSTHLLD 257

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
             +   Y+++ A+R   +IGL PLF   + P  +    + ++K  NFFE R T Y 
Sbjct: 258 IEAIICYVRYSADRLLGEIGLSPLFNAPKPPPSFPLAFMTVEKHTNFFERRSTAYS 313


>gi|225075859|ref|ZP_03719058.1| hypothetical protein NEIFLAOT_00882 [Neisseria flavescens
           NRL30031/H210]
 gi|224952805|gb|EEG34014.1| hypothetical protein NEIFLAOT_00882 [Neisseria flavescens
           NRL30031/H210]
          Length = 388

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E  +A      G 
Sbjct: 248 RDEALHLTSTQHMLNLMRAGADDPEMAEIANELQDECFNLFKKAAEQEKEWAAYLFKDGS 307

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   F+  T+NP PW++  + 
Sbjct: 308 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLS 353


>gi|270262779|ref|ZP_06191050.1| ribonucleoside-diphosphate reductase 1 subunit beta [Serratia
           odorifera 4Rx13]
 gi|270043463|gb|EFA16556.1| ribonucleoside-diphosphate reductase 1 subunit beta [Serratia
           odorifera 4Rx13]
          Length = 359

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E  +A      G 
Sbjct: 220 RDEALHLTGTQHILNLMRSGADDPEMAEIAVECQQQCYDLFVLAAQQEKEWAEYLFRDGS 279

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F+   NP PW++  ++    +    E  V+ 
Sbjct: 280 MIGLNKDILCQYVEYITNIRMQAVGLGLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 339

Query: 116 Y 116
           Y
Sbjct: 340 Y 340


>gi|126174279|ref|YP_001050428.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           baltica OS155]
 gi|125997484|gb|ABN61559.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella baltica OS155]
          Length = 376

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +++ ++   ++P +     E QQ++  +  +A   E  +A      G 
Sbjct: 237 RDEALHLNSTQHILSIMQGGKDDPEMGEIAAECQQEAFDLFFKAAEQEKEWAKYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
            +GLN     QY++FI N+R   + L   +    NP PWM   +
Sbjct: 297 MIGLNEQILCQYVEFITNQRMKSVNLPQPYLEITNPLPWMKNWL 340


>gi|251792451|ref|YP_003007177.1| ribonucleotide-diphosphate reductase subunit beta [Aggregatibacter
           aphrophilus NJ8700]
 gi|315634378|ref|ZP_07889665.1| ribonucleotide-diphosphate reductase beta subunit [Aggregatibacter
           segnis ATCC 33393]
 gi|247533844|gb|ACS97090.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           aphrophilus NJ8700]
 gi|315476968|gb|EFU67713.1| ribonucleotide-diphosphate reductase beta subunit [Aggregatibacter
           segnis ATCC 33393]
          Length = 376

 Score =  100 bits (249), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQEKDWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F+   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|293395206|ref|ZP_06639492.1| ribonucleoside-diphosphate reductase [Serratia odorifera DSM 4582]
 gi|291422383|gb|EFE95626.1| ribonucleoside-diphosphate reductase [Serratia odorifera DSM 4582]
          Length = 376

 Score =  100 bits (249), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGADDPEMAEIAVECQQQCYDLFVLAAQQEKEWAEYLFSGGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   FK   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGAPFKTRSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQIDSEINAD 369


>gi|148653376|ref|YP_001280469.1| ribonucleotide-diphosphate reductase subunit beta [Psychrobacter
           sp. PRwf-1]
 gi|148572460|gb|ABQ94519.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Psychrobacter sp. PRwf-1]
          Length = 377

 Score =  100 bits (249), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 7/122 (5%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +IN +    ++P +   + +   +S  +  +A   E  +A      G 
Sbjct: 237 RDEALHLTSTQHMINIMASGKDDPEMAEISAQCHNESIEIFRKAAEQEKEWAGYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS-EVIDLKKEKNFFETRVT 114
            +GLN     QY+++I N R   +GL  +F  ++ NP PW++  +     +    ET ++
Sbjct: 297 MIGLNKDILCQYVEYITNLRMEAVGLPGIFPESKSNPIPWINTWLSSDNVQVAPQETEIS 356

Query: 115 EY 116
            Y
Sbjct: 357 SY 358


>gi|117920413|ref|YP_869605.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp.
           ANA-3]
 gi|117612745|gb|ABK48199.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella sp. ANA-3]
          Length = 391

 Score =  100 bits (249), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDV--INQIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +  I Q   ++P +     E QQ++  +  +A   E  +A      G 
Sbjct: 252 RDEALHLNSTQHILTIMQGGKDDPEMAEIAAECQQEAYNLFLKAAEQEKEWAKYLFKDGS 311

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
            +GLN     QY+++I N+R   + L   +    NP PWM   +
Sbjct: 312 MIGLNEQILCQYVEYITNQRMKSVNLPLPYAELSNPLPWMKNWL 355


>gi|24373963|ref|NP_718006.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           oneidensis MR-1]
 gi|24348405|gb|AAN55450.1|AE015682_5 ribonucleoside-diphosphate reductase, beta subunit [Shewanella
           oneidensis MR-1]
          Length = 376

 Score =  100 bits (249), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDV--INQIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    +  I Q   ++P +     E QQ++  +  +A   E  +A      G 
Sbjct: 237 RDEALHLNSTQHILTIMQGGKDDPEMGEIAIECQQEAYNLFLKAAEQEKEWAKYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
            +GLN     QY+++I N+R   + L   +    NP PWM   +
Sbjct: 297 MIGLNEQILCQYVEYITNQRMKSVNLPQPYAEQTNPLPWMKNWL 340


>gi|298368555|ref|ZP_06979873.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sp.
           oral taxon 014 str. F0314]
 gi|298282558|gb|EFI24045.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sp.
           oral taxon 014 str. F0314]
          Length = 384

 Score =  100 bits (249), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTSTQHMLNLMRAGADDPEMAEIAVELQDECFKLFKKAAEQEKEWAAYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   F+  T+NP PW++  + 
Sbjct: 304 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLS 349


>gi|255065945|ref|ZP_05317800.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sicca
           ATCC 29256]
 gi|255049856|gb|EET45320.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sicca
           ATCC 29256]
          Length = 377

 Score =  100 bits (249), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTSTQHMLNLMRAGSDDPEMAEIAVELQDECFKLFKKAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   F+  T+NP PW++  + 
Sbjct: 297 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLS 342


>gi|91775577|ref|YP_545333.1| ribonucleotide-diphosphate reductase subunit beta [Methylobacillus
           flagellatus KT]
 gi|91709564|gb|ABE49492.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Methylobacillus flagellatus KT]
          Length = 377

 Score =  100 bits (249), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 6/105 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P       E Q +   M   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNIMRSGQDDPEFAGIASELQDECFEMFKRAAEQEKKWADYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVI 100
            +GLN     QY+++I N R   +GL   F   + NP PW++  +
Sbjct: 297 MIGLNRDILCQYVEYITNNRMASVGLSAAFPNAKNNPIPWINTWL 341


>gi|119944866|ref|YP_942546.1| ribonucleotide-diphosphate reductase subunit beta [Psychromonas
           ingrahamii 37]
 gi|119863470|gb|ABM02947.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Psychromonas ingrahamii 37]
          Length = 381

 Score =  100 bits (249), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    ++N      ++P +     E   + R +  +A   E  +A      G 
Sbjct: 242 RDEALHLNSTQQILNLWADGKDDPEMAEIAIECFAEGREIFLQAAQQEKDWAKYLFKDGS 301

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++IAN R   IG  P F+   NP PW+ + ++    +    ET ++ 
Sbjct: 302 MIGLNEQILSQYVEYIANLRMQAIGYAPEFEVKSNPIPWINNWLVSDNVQVAPQETEISS 361

Query: 116 Y 116
           Y
Sbjct: 362 Y 362


>gi|241760495|ref|ZP_04758588.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           flavescens SK114]
 gi|241318999|gb|EER55501.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           flavescens SK114]
          Length = 377

 Score =  100 bits (249), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTSTQHMLNLMRAGADDPEMAEIAVELQDECFKLFKKAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   F+  T+NP PW++  + 
Sbjct: 297 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLS 342


>gi|297250515|ref|ZP_06864465.2| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           polysaccharea ATCC 43768]
 gi|296838835|gb|EFH22773.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           polysaccharea ATCC 43768]
          Length = 377

 Score = 99.7 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 342


>gi|91793308|ref|YP_562959.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           denitrificans OS217]
 gi|91715310|gb|ABE55236.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella denitrificans OS217]
          Length = 376

 Score = 99.7 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    ++  ++   ++P +     E QQ++  + ++A   E  +A      G 
Sbjct: 237 RDEALHLNSTQHILALMQGGKDDPEMAEIAIECQQQAYDLFYKAAEQEKEWAKYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
            +GLN     QY+++I N+R   + L   +    NP PWM   +
Sbjct: 297 MIGLNEQILCQYVEYITNQRMKSVHLPQPYAEISNPLPWMKNWL 340


>gi|7226528|gb|AAF41664.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis MC58]
 gi|254670476|emb|CBA06168.1| ribonucleoside-diphosphate reductase beta chain [Neisseria
           meningitidis alpha153]
          Length = 384

 Score = 99.7 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 349


>gi|238794995|ref|ZP_04638591.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           intermedia ATCC 29909]
 gi|238725698|gb|EEQ17256.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           intermedia ATCC 29909]
          Length = 376

 Score = 99.7 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLMRSGEDDPEMAEIAIECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL   F    NP PW+ S ++    +    E  V+ 
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGVPFATRTNPIPWINSWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQIDSEVSAD 369


>gi|161353784|ref|NP_274308.2| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           meningitidis MC58]
 gi|304387414|ref|ZP_07369605.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           meningitidis ATCC 13091]
 gi|304338507|gb|EFM04626.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           meningitidis ATCC 13091]
 gi|316984078|gb|EFV63056.1| ribonucleoside-diphosphate reductase 1 subunit beta [Neisseria
           meningitidis H44/76]
 gi|325134468|gb|EGC57113.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M13399]
 gi|325140485|gb|EGC63006.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis CU385]
 gi|325144569|gb|EGC66868.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M01-240013]
 gi|325200084|gb|ADY95539.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis H44/76]
 gi|325204292|gb|ADY99745.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M01-240355]
 gi|325205936|gb|ADZ01389.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M04-240196]
          Length = 377

 Score = 99.7 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 342


>gi|319410557|emb|CBY90925.1| ribonucleoside-diphosphate reductase beta subunit (ribonucleotide
           reductase) [Neisseria meningitidis WUE 2594]
 gi|325208250|gb|ADZ03702.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis NZ-05/33]
          Length = 384

 Score = 99.7 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 349


>gi|1710396|sp|P50644|RIR2_EHV4 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|515833|emb|CAA53101.1| ribonucleoside-diphosphate reductase [Equid herpesvirus 4]
          Length = 320

 Score = 99.7 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 4/116 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H N    + N         + K    +   +  EA  +E  +     PK    L+
Sbjct: 202 RDEAIHTNASCCIYNNYLGG----FEKPAPTRIYALFSEAVNIECEFLLSHAPKSSHLLD 257

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
             +   Y+++ A+R   +IGL PLF   + P  +    + ++K  NFFE R T Y 
Sbjct: 258 IEAIICYVRYSADRLLGEIGLSPLFNAPKPPPSFPLAFMTVEKHTNFFERRSTAYS 313


>gi|124487872|gb|ABN12019.1| putative ribonucleotide reductase R2 subunit [Maconellicoccus
           hirsutus]
          Length = 249

 Score = 99.7 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 44/94 (46%), Gaps = 8/94 (8%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63
           ESL+ +F   +  +       L  +   ++   ++ EA ++E  ++ + +P   +G++  
Sbjct: 127 ESLYTDFACLLFKR-------LVQRPSVEEITEIIREAVIIEQEFSTKGLPVSLIGMDCE 179

Query: 64  SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
               Y++F+A+R    +    +F    NPF +M 
Sbjct: 180 LMTTYIEFVADRLLQALNCPKVF-GVPNPFGFME 212


>gi|218768312|ref|YP_002342824.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           meningitidis Z2491]
 gi|121052320|emb|CAM08650.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           meningitidis Z2491]
 gi|261392428|emb|CAX49973.1| ribonucleoside-diphosphate reductase beta subunit (ribonucleotide
           reductase) [Neisseria meningitidis 8013]
          Length = 377

 Score = 99.7 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 342


>gi|127512873|ref|YP_001094070.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           loihica PV-4]
 gi|126638168|gb|ABO23811.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella loihica PV-4]
          Length = 376

 Score = 99.7 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    ++  ++   ++P +    KE +Q +  +  +A   E  +A      G 
Sbjct: 237 RDEALHLNSTQHILKLMQGGKDDPEMAEIAKECEQTAIDIFVKAAEQEKEWAKYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
            +GLN     QY+++I N R   + L   +    NP PWM   +
Sbjct: 297 MIGLNEQILCQYVEYITNERMKSVNLVSPYADQSNPLPWMKNWL 340


>gi|161870162|ref|YP_001599332.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           meningitidis 053442]
 gi|161595715|gb|ABX73375.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           meningitidis 053442]
          Length = 384

 Score = 99.7 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 349


>gi|330949820|gb|EGH50080.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae Cit 7]
          Length = 359

 Score = 99.3 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/69 (59%), Positives = 54/69 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKKEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYM 69
           NA   E Y+
Sbjct: 351 NAAMMEDYL 359


>gi|308389409|gb|ADO31729.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           meningitidis alpha710]
          Length = 384

 Score = 99.3 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 349


>gi|254805092|ref|YP_003083313.1| ribonucleoside-diphosphate reductase beta chain [Neisseria
           meningitidis alpha14]
 gi|254668634|emb|CBA06257.1| ribonucleoside-diphosphate reductase beta chain [Neisseria
           meningitidis alpha14]
          Length = 384

 Score = 99.3 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 349


>gi|121635003|ref|YP_975248.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           meningitidis FAM18]
 gi|120866709|emb|CAM10461.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           meningitidis FAM18]
 gi|325128288|gb|EGC51172.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis N1568]
 gi|325130346|gb|EGC53112.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis OX99.30304]
 gi|325132508|gb|EGC55201.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M6190]
 gi|325136206|gb|EGC58814.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M0579]
 gi|325138282|gb|EGC60851.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis ES14902]
 gi|325142424|gb|EGC64828.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis 961-5945]
 gi|325198443|gb|ADY93899.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis G2136]
 gi|325201998|gb|ADY97452.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M01-240149]
          Length = 377

 Score = 99.3 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 342


>gi|157961884|ref|YP_001501918.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           pealeana ATCC 700345]
 gi|157846884|gb|ABV87383.1| Ribonucleoside-diphosphate reductase [Shewanella pealeana ATCC
           700345]
          Length = 376

 Score = 99.3 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    ++       ++P +    KE +Q +  +  +A   E  +A      G 
Sbjct: 237 RDEALHLNSTQHILKIMHAGKDDPEMAEIAKECEQTAIDIFIKAAEQEKEWAKYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
            +GLN     QY+++I N R   +     +    NP PWM   +
Sbjct: 297 MIGLNETILCQYVEYITNERMKAVNFASPYAEQTNPLPWMKNWL 340


>gi|209695249|ref|YP_002263178.1| ribonucleotide-diphosphate reductase subunit beta [Aliivibrio
           salmonicida LFI1238]
 gi|208009201|emb|CAQ79455.1| ribonucleoside-diphosphate reductase 1 beta chain [Aliivibrio
           salmonicida LFI1238]
          Length = 377

 Score = 99.3 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P       E +Q    +   A   E  +A+     G 
Sbjct: 237 RDEALHLTSTQHMVNLLRTGQDDPEFVEIAAECEQDCFDLFKAAAEQEKEWANYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   +   T+NP PW++  + 
Sbjct: 297 MIGLNKDILCQYVEYITNLRMKAVGLSGAYDGATQNPIPWINSWLS 342


>gi|221316490|ref|ZP_03598295.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. NCIB 3610]
          Length = 347

 Score = 99.3 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 6/129 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F   ++  I  + P L T+EF +       E   LE  +  + + K    ++
Sbjct: 218 RDEMKHSYFQTILVRDILTQYPELNTEEFSEFVYDFFTELVQLEREFCED-LYKNTPDID 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEV--IDLKK-EKNFFETRVTEYQQ 118
               ++Y+ + AN     +GL+ +F   +NP PW++     +L   +++FFE +   Y +
Sbjct: 277 IEEVKEYIGYRANLILDNLGLDQIFSAKKNPMPWITAFDPDNLNNTKRDFFEDKEVNYGK 336

Query: 119 GAEL--KWD 125
             E    WD
Sbjct: 337 ANEQKNDWD 345


>gi|323650974|ref|YP_004243617.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. natto]
 gi|323461614|dbj|BAJ77030.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. natto]
          Length = 347

 Score = 99.3 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 4/127 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F   ++  I  + P L T+EF +       E   LE  +  + + K    ++
Sbjct: 218 RDEMKHSYFQTILVRDILTQYPELNTEEFSEFVYDFFTELVQLEREFCED-LYKNTPDID 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEV--IDLKK-EKNFFETRVTEYQQ 118
               ++Y+ + AN     +GL+ +F   +NP PW++     +L   +++FFE +   Y +
Sbjct: 277 IEEVKEYIGYRANLILDNLGLDQIFAAKKNPMPWITAFDPDNLNNTKRDFFEDKEVNYGK 336

Query: 119 GAELKWD 125
             E K D
Sbjct: 337 ANEQKND 343


>gi|12084869|ref|NP_073334.1| ribonucleotide reductase subunit 2 [Meleagrid herpesvirus 1]
 gi|11095873|gb|AAG30080.1|AF282130_43 UL40 ribonucleotide reductase small subunit [Meleagrid herpesvirus
           1]
 gi|12025152|gb|AAG45778.1|AF291866_45 UL40 ribonucleotide reductase, small subunit [Meleagrid herpesvirus
           1]
          Length = 355

 Score = 99.3 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 7/124 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+     +             K    +  T+  EA  LE  +     P+    +N
Sbjct: 238 RDEAIHVEASCCIFKNYLAGP-----KPTTARIHTLFKEAVRLECEFLRTAAPRTSNIIN 292

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             +   Y+++ A+R    + + P++   + P  +   ++      NFFE R T Y     
Sbjct: 293 IDAICSYVRYSADRLLRALDILPIYDEPKPPADFPLVLMSAASNTNFFERRNTAY--SGS 350

Query: 122 LKWD 125
           +  D
Sbjct: 351 VSND 354


>gi|10834911|ref|NP_066872.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 3]
 gi|5102912|dbj|BAA78729.1| UL40 protein [Marek's disease virus serotype 2 MDV2]
 gi|5689312|dbj|BAA82936.1| UL40 product homolog [Marek's disease virus serotype 2 MDV2]
 gi|10800005|dbj|BAB16550.1| UL40 protein [Gallid herpesvirus 3]
          Length = 353

 Score = 99.0 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 7/124 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+     +       N     K    + + +  EA  LE A+     P+    L+
Sbjct: 236 RDEAIHVEASCCIFKNYIAGN-----KPSTARIQALFSEAVDLECAFLRAAAPRDSRLLD 290

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S   Y+++ A+R    + + P++        +   ++      NFFE R T Y     
Sbjct: 291 IGSICSYVRYSADRLLRMLDVPPIYGEPSPAADFPLSLMSASNNTNFFERRSTAY--SGS 348

Query: 122 LKWD 125
           +  D
Sbjct: 349 VSND 352


>gi|209523562|ref|ZP_03272116.1| ribonucleoside-diphosphate reductase beta chain [Arthrospira maxima
           CS-328]
 gi|209495967|gb|EDZ96268.1| ribonucleoside-diphosphate reductase beta chain [Arthrospira maxima
           CS-328]
          Length = 112

 Score = 99.0 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 8/103 (7%)

Query: 31  QQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---K 87
           Q +   M   A   E  + +  +    +G+   S EQY +++AN R   IGLE L+   K
Sbjct: 8   QDRIYEMFDAAVQHECRWTNHIVGNNILGITEHSTEQYTKYLANIRLRSIGLESLYSDPK 67

Query: 88  YTENPFPWMSEVIDLKK----EKNFFETRVTEYQQGAELK-WD 125
           Y ++P+  +    D KK    + NFFE  VT Y   + +  WD
Sbjct: 68  YQKSPYTHLERFSDTKKEAHTKANFFEASVTSYVMSSGVSGWD 110


>gi|33519930|ref|NP_878762.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Blochmannia floridanus]
 gi|33504276|emb|CAD83168.1| ribonucleoside-diphosphate reductase 1 beta chain [Candidatus
           Blochmannia floridanus]
          Length = 376

 Score = 99.0 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 5/105 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLWTKEF--QQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDESLHLN    ++N ++   ++P +       Q++S  +   A   E  +AH     G 
Sbjct: 237 RDESLHLNATQHILNLMRSGSDDPEMVDISLICQEESYNLFLMAAEQEKTWAHYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101
            +GLN     QY+++I N R   IGL+  F    N  PW++  + 
Sbjct: 297 MIGLNKEILCQYIEYITNIRMQAIGLKTPFNTKTNSIPWINAWLS 341


>gi|225023977|ref|ZP_03713169.1| hypothetical protein EIKCOROL_00844 [Eikenella corrodens ATCC
           23834]
 gi|224943002|gb|EEG24211.1| hypothetical protein EIKCOROL_00844 [Eikenella corrodens ATCC
           23834]
          Length = 384

 Score = 99.0 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E +     +  +A   E  +A      G 
Sbjct: 244 RDEALHLTSTQHMLNLMRSGTDDPEMAEIAAELENDCFELFKKAAEQEKEWAEYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   F   T+NP PW++  + 
Sbjct: 304 MIGLNKDILCQYVEYITNHRMMAVGLNAAFPAATQNPIPWINAWLS 349


>gi|125745092|ref|YP_001033969.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 2]
 gi|327488446|sp|Q77MS0|RIR2_GAHVM RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|7673151|gb|AAF66775.1|AF147806_39 ribonucleotide reductase small subunit [Gallid herpesvirus 2]
 gi|10180745|gb|AAG14233.1|AF243438_48 UL40 ribonucleotide reductase small subunit-like protein [Gallid
           herpesvirus 2]
 gi|104304005|gb|ABF72280.1| HSV-1 UL40-like protein [Gallid herpesvirus 2]
 gi|148806369|gb|ABR13125.1| UL40 [Gallid herpesvirus 2]
 gi|194346388|gb|ACF49570.1| UL40 [synthetic construct]
 gi|194750382|gb|ACF94859.1| UL40 [Gallid herpesvirus 2]
 gi|237626230|gb|ACR02753.1| UL40 [synthetic construct]
 gi|237626404|gb|ACR02926.1| UL40 [synthetic construct]
          Length = 343

 Score = 98.6 bits (245), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 50/124 (40%), Gaps = 7/124 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+     +          +  K    + + +  EA  +E A+     P+    L+
Sbjct: 226 RDEAIHVEASCCIFKNYL-----MGPKPSIGRVQELFKEAVQIECAFLRTAAPRNSQLLD 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             +   Y+++ A+R   ++ + P++   +    +   ++      NFFE R T Y     
Sbjct: 281 VEAICSYVRYSADRLLKELDMPPIYNEPKPTADFPLALMTASNNTNFFERRNTAY--SGS 338

Query: 122 LKWD 125
           +  D
Sbjct: 339 VSND 342


>gi|71892252|ref|YP_277986.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Blochmannia pennsylvanicus str. BPEN]
 gi|71796358|gb|AAZ41109.1| ribonucleoside-diphosphate reductase 1, beta subunit [Candidatus
           Blochmannia pennsylvanicus str. BPEN]
          Length = 376

 Score = 98.6 bits (245), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 5/105 (4%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    ++N ++   ++P +     E QQ+S  +   A   E  +A+     G 
Sbjct: 237 RDEALHLNATQHILNLMRSGSDDPEMADISTECQQESYALFLMAAEQEKNWANYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101
            +GLN     QY+++I N R   IGL   F    N  PW++  + 
Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAIGLRTPFNIKSNVIPWINSWLS 341


>gi|190150315|ref|YP_001968840.1| ribonucleoside-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|303253584|ref|ZP_07339722.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307245900|ref|ZP_07527985.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307247988|ref|ZP_07530018.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307254872|ref|ZP_07536697.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307259315|ref|ZP_07541044.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|307263658|ref|ZP_07545269.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|189915446|gb|ACE61698.1| ribonucleoside-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302647504|gb|EFL77722.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306853260|gb|EFM85480.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306855503|gb|EFM87676.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306862169|gb|EFM94138.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306866682|gb|EFM98541.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306871035|gb|EFN02768.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 376

 Score = 98.6 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE LHL    +++N I    ++P +    +E +Q++  +   A   E  +A      G 
Sbjct: 237 RDEYLHLTGTQNMLNIIASGQDDPEMAEIAEECKQEAYDLFVAAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     +Y+++I N R   +GL   F  + NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNEDILVKYVEYITNIRMQAVGLPRPFAASSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|126208467|ref|YP_001053692.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae L20]
 gi|165976419|ref|YP_001652012.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|303251074|ref|ZP_07337260.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307250239|ref|ZP_07532194.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|307252630|ref|ZP_07534523.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307261475|ref|ZP_07543145.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|126097259|gb|ABN74087.1| ribonucleoside-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|165876520|gb|ABY69568.1| ribonucleoside-diphosphate reductase, beta chain [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|302650084|gb|EFL80254.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306857725|gb|EFM89826.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306859875|gb|EFM91895.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306868827|gb|EFN00634.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 376

 Score = 98.2 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE LHL    +++N I    ++P +    +E +Q++  +   A   E  +A      G 
Sbjct: 237 RDEYLHLTGTQNMLNIIASGQDDPEMAEIAEECKQEAYDLFVAAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     +Y+++I N R   +GL   F  + NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNEDILVKYVEYITNIRMQAVGLPRPFAASSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|307257037|ref|ZP_07538813.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306864521|gb|EFM96428.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 376

 Score = 98.2 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE LHL    +++N I    ++P +    +E +Q++  +   A   E  +A      G 
Sbjct: 237 RDEYLHLTGTQNMLNIIASGQDDPEMAEIAEECKQEAYDLFVAAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     +Y+++I N R   +GL   F    NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNEDILVKYVEYITNIRMQAVGLPRPFATASNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|237808189|ref|YP_002892629.1| ribonucleotide-diphosphate reductase subunit beta [Tolumonas
           auensis DSM 9187]
 gi|237500450|gb|ACQ93043.1| ribonucleotide reductase [Tolumonas auensis DSM 9187]
          Length = 377

 Score = 98.2 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +    +E   +   +  +A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHMLNILREGNDDPEMAEIARELHDECFALFKKAAEQEKEWASYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101
            +GLN     QY++FI N R   +GL   F    +NP PW++  ++
Sbjct: 297 MLGLNKDILCQYVEFITNVRMQGVGLPLAFDADRQNPLPWINTWLN 342


>gi|322832009|ref|YP_004212036.1| Ribonucleoside-diphosphate reductase [Rahnella sp. Y9602]
 gi|321167210|gb|ADW72909.1| Ribonucleoside-diphosphate reductase [Rahnella sp. Y9602]
          Length = 376

 Score = 98.2 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL      +N ++   ++P +     E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHALNLLRSGQDDPEMAEIALECQQECHDLFVLAAQQEKDWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  FK   NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDAPFKTRSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|269865122|ref|XP_002651812.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063829|gb|EED42244.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 336

 Score = 98.2 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 9/94 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   I  +               ++ EA  +E  +  E++P   +G+N
Sbjct: 219 RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 269

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 95
                QY++F+A+R    +G   ++ +  +   W
Sbjct: 270 CKLMCQYIEFVADRLLFALGERKIYTFLTHSISW 303


>gi|332974578|gb|EGK11498.1| ribonucleotide-diphosphate reductase beta subunit [Kingella kingae
           ATCC 23330]
          Length = 384

 Score = 98.2 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++     L       E Q +   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTSTQHMLNLMRSGVDDLDMAEIAAELQDECFELFKKAAEQEKEWAAYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL+  F   T+NP PW++  + 
Sbjct: 304 MIGLNKDILCQYVEYITNHRMLAVGLQAAFPQATQNPIPWINAWLS 349


>gi|315930891|gb|EFV09876.1| ribonucleotide reductase, small chain family protein [Campylobacter
           jejuni subsp. jejuni 305]
          Length = 305

 Score = 98.2 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+  E   K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENP 92
               E+Y+ ++ ++R   I L+ L+   ++P
Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHP 305


>gi|193206379|ref|NP_500944.2| hypothetical protein F58F9.1 [Caenorhabditis elegans]
          Length = 581

 Score = 98.2 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 46/82 (56%), Gaps = 2/82 (2%)

Query: 28  KEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK 87
           K  + +   +++E+ L+E  +  E++P   +G+N     +Y++F+A+    ++G    + 
Sbjct: 502 KPAESRITEIINESVLVEQDFVRESLPTNLIGMNQHMMCKYVEFVADLLLEELGYSKRYN 561

Query: 88  YTENPFPWMSEVIDLKKEKNFF 109
            T+N F +M E I ++ + NFF
Sbjct: 562 -TKNLFDFM-ENISIEGKTNFF 581


>gi|172054963|ref|YP_001806290.1| ribonucleoside-diphosphate reductase subunit beta [Cyanothece sp.
           ATCC 51142]
 gi|171701244|gb|ACB54224.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp.
           ATCC 51142]
          Length = 347

 Score = 97.8 bits (243), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 9/127 (7%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DE  H++    +I + K +  +      + +   +       EI + +       +G++ 
Sbjct: 222 DELTHVSLYQKLITEAKTKFSY-----SEDEITELFVNTVEKEIEWTNHIFDGQILGVSE 276

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENP---FPWMSEVIDLKKEKNFFETRVTEYQQG 119
            S E Y +++AN R   IG+  ++   ENP     W       K +  FFET VT Y Q 
Sbjct: 277 ASTEAYTKYLANLRLKAIGISAIYPEVENPYAHLDWADFKGIGKSKAAFFETEVTGYAQP 336

Query: 120 AELK-WD 125
             +K W+
Sbjct: 337 TAVKGWE 343


>gi|216905873|ref|YP_002333501.1| ribonucleotide reductase subunit 2 [Equid herpesvirus 9]
 gi|216410027|dbj|BAH02445.1| small subunit of ribonucleotide reductase [Equid herpesvirus 9]
          Length = 321

 Score = 97.8 bits (243), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 4/116 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N         + K   ++   +  EA  +E  +     P+    L+
Sbjct: 203 RDEAIHTRASCCIYNNYLGG----FEKPEPKRIYELFSEAVNIECEFLLSHAPQNSHLLD 258

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
                 Y+++ A+R   +IGL PLF   +    +    + ++K  NFFE R T Y 
Sbjct: 259 IGEIISYVRYSADRLLGEIGLSPLFNAPKPSTSFPLAFMTVEKHTNFFERRSTAYS 314


>gi|703073|gb|AAA80557.1| ribonucleotide reductase small subunit [Gallid herpesvirus 2]
          Length = 354

 Score = 97.8 bits (243), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 7/124 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+     +             K    +  T+  EA  +E  +     P+    +N
Sbjct: 237 RDEAIHVEASCCIFKNYLAGP-----KPTTARIHTLFKEAVTVECEFLRTAAPRTSNIIN 291

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             +   Y+++ A+R    + + P++   + P  +   ++      NFFE R T Y     
Sbjct: 292 IDAICSYVRYSADRLLRALDILPIYDEPKPPADFPLVLMSAASNTNFFERRNTAY--SGS 349

Query: 122 LKWD 125
           +  D
Sbjct: 350 VSND 353


>gi|41387638|gb|AAS01682.1| ribonucleotide reductase small subunit [Gallid herpesvirus 2]
          Length = 343

 Score = 97.8 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 49/124 (39%), Gaps = 7/124 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+     +          +  K    + + +  EA  +E A+     P     L+
Sbjct: 226 RDEAIHVEASCCIFKNYL-----MGPKPSIGRVQELFKEAVQIECAFLRTAAPHNSQLLD 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             +   Y+++ A+R   ++ + P++   +    +   ++      NFFE R T Y     
Sbjct: 281 VEAICSYVRYSADRLLKELDMPPIYNEPKPTADFPLALMTASNNTNFFERRNTAY--SGS 338

Query: 122 LKWD 125
           +  D
Sbjct: 339 VSND 342


>gi|215275538|sp|P0C8I0|RIR2_ASFK5 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 327

 Score = 97.4 bits (242), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG---FV 58
           RDE +H +F   +I+      P       ++    +L EA  L   +      K      
Sbjct: 196 RDEGMHCSFACFLISNYLNNIPE------EKIIHKILKEAVELVDEFISYAFDKARGSVP 249

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE-VIDLKKEKNFFETRVTEYQ 117
           G +     QY+++  +  C  +  + ++K  ENPFP M++  ++  ++ NFFE R T+YQ
Sbjct: 250 GFSKEMLFQYIRYFTDNLCFMLQCKSIYK-VENPFPQMTKFFLNEVEKTNFFELRPTQYQ 308


>gi|322514736|ref|ZP_08067762.1| ribonucleotide-diphosphate reductase beta subunit [Actinobacillus
           ureae ATCC 25976]
 gi|322119331|gb|EFX91447.1| ribonucleotide-diphosphate reductase beta subunit [Actinobacillus
           ureae ATCC 25976]
          Length = 376

 Score = 97.4 bits (242), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE LHL    +++N +    ++P +    +E +Q++  +   A   E  +A      G 
Sbjct: 237 RDEYLHLTGTQNMLNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     +Y+++I N R   +GL   F  + NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNEDILVKYVEYITNIRMQAVGLPRPFATSSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|312162814|ref|YP_003933799.1| ribonucleotide reductase subunit 2 [Saimiriine herpesvirus 1]
 gi|308096447|gb|ADO13787.1| ribonucleotide reductase subunit 2 [Saimiriine herpesvirus 1]
          Length = 338

 Score = 97.4 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 7/119 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N      P    K    +   +  EA  +EI + H   P+    L+
Sbjct: 217 RDEAIHTTASCYIYNNYLTGYP----KPSTDRIHYLFREAVEIEIRFIHSQAPRDSHILD 272

Query: 62  APSCEQ---YMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
           A +  Q   Y+ F A+R    I L PLF        +   ++  +K  NFFE+R T Y 
Sbjct: 273 AAALRQIDNYVHFCADRLLKMIKLPPLFDAPAPDCSFPLALMFTEKHTNFFESRSTAYA 331


>gi|254672337|emb|CBA05511.1| ribonucleoside-diphosphate reductase beta chain [Neisseria
           meningitidis alpha275]
          Length = 345

 Score = 97.4 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 6/102 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMS 97
            +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 345


>gi|90409249|ref|ZP_01217354.1| ribonucleotide-diphosphate reductase beta subunit [Psychromonas sp.
           CNPT3]
 gi|90309647|gb|EAS37827.1| ribonucleotide-diphosphate reductase beta subunit [Psychromonas sp.
           CNPT3]
          Length = 381

 Score = 97.4 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHLN    ++N      ++P +     E   K R +   A   E  +A      G 
Sbjct: 242 RDEALHLNSTQQILNIWADGKDDPEMAEIAIECHAKGRDIFLTAAAQEKEWAAYLFKDGS 301

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I+N R   IG E  F+   NP PW++  +I    +    E  ++ 
Sbjct: 302 MIGLNEVILCQYVEYISNVRMQAIGYEAPFEIKNNPIPWINHWLISDNVQVAPQEAEISS 361

Query: 116 Y 116
           Y
Sbjct: 362 Y 362


>gi|238021387|ref|ZP_04601813.1| hypothetical protein GCWU000324_01286 [Kingella oralis ATCC 51147]
 gi|237868367|gb|EEP69373.1| hypothetical protein GCWU000324_01286 [Kingella oralis ATCC 51147]
          Length = 384

 Score = 97.0 bits (241), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   E         E Q +   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTSTQHMLNLMRGGAEGAEWAEIAAELQNECFELFKKAAEQEKEWAEYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL+P F+  T+NP PW++  + 
Sbjct: 304 MIGLNKDILCQYVEYITNARMLAVGLQPAFEKATQNPIPWINTWLS 349


>gi|296316020|ref|YP_003662484.1| ribonucleotide reductase subunit 2 [Bovine herpesvirus 5]
 gi|40456143|gb|AAR86121.1| UL40 ribonucleotide reductase small subunit [Bovine herpesvirus 5]
          Length = 315

 Score = 97.0 bits (241), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 6/123 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N           +    + R +  EA  +E  +     P+G   L+
Sbjct: 198 RDEAVHTTASCCIFNNYLGGE-----RPPPDRVRKLFREAVEIEREFIWSRAPRGSHILD 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             +   Y+++ A+R    I L PLF        +   ++  +K  NFFE R T Y  G  
Sbjct: 253 VEAISAYVEYSADRLLAAIHLPPLFGTPPPGTDFPLALMTAEKHTNFFERRSTTY-TGTV 311

Query: 122 LKW 124
           +  
Sbjct: 312 IND 314


>gi|50313261|ref|YP_053065.1| ribonucleotide reductase subunit 2 [Equid herpesvirus 1]
 gi|132625|sp|P28847|RIR2_EHV1B RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|42795147|gb|AAS45904.1| small subunit of ribonucleotide reductase [Equid herpesvirus 1]
 gi|49617004|gb|AAT67277.1| ribonucleotide reductase RR2 [Equid herpesvirus 1]
          Length = 321

 Score = 96.6 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 4/116 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N         + K   ++   +  EA  +E  +     P+    L+
Sbjct: 203 RDEAIHTRASCCIYNNYLGG----FEKPEPKRIYELFSEAVNIECEFLLSHAPQYSHLLD 258

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
             +   Y+++ A+R   +IGL PLF   +    +    + ++K  NFFE R T Y 
Sbjct: 259 IGAIISYVRYSADRLLGEIGLSPLFNAPKPSPSFPLAFMTVEKHTNFFERRSTAYS 314


>gi|294788520|ref|ZP_06753762.1| ribonucleoside-diphosphate reductase, beta subunit [Simonsiella
           muelleri ATCC 29453]
 gi|294483397|gb|EFG31082.1| ribonucleoside-diphosphate reductase, beta subunit [Simonsiella
           muelleri ATCC 29453]
          Length = 384

 Score = 96.3 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E   +   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTSTQHMLNLMRNGTDDPEMAEIAAELHDECVALFKKAAAQEKEWAAYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   F    +NP PW++  + 
Sbjct: 304 MIGLNKDILGQYVEYITNLRMSAVGLPQAFPKALQNPIPWINAWLS 349


>gi|15616797|ref|NP_240009.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. APS (Acyrthosiphon pisum)]
 gi|219681552|ref|YP_002467937.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera
           aphidicola str. 5A (Acyrthosiphon pisum)]
 gi|219682108|ref|YP_002468492.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera
           aphidicola str. Tuc7 (Acyrthosiphon pisum)]
 gi|257471235|ref|ZP_05635234.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. LSR1 (Acyrthosiphon pisum)]
 gi|11134533|sp|P57275|RIR2_BUCAI RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|25285834|pir||G84950 ribonucleoside-diphosphate reductase (EC 1.17.4.1) nrdB [imported]
           - Buchnera sp. (strain APS)
 gi|10038860|dbj|BAB12895.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera
           aphidicola str. APS (Acyrthosiphon pisum)]
 gi|219621841|gb|ACL29997.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera
           aphidicola str. Tuc7 (Acyrthosiphon pisum)]
 gi|219624395|gb|ACL30550.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera
           aphidicola str. 5A (Acyrthosiphon pisum)]
 gi|311087074|gb|ADP67154.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. JF99 (Acyrthosiphon pisum)]
          Length = 376

 Score = 95.9 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDVINQI----KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +      EN      E ++++  +   A   E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNLLSNIKNNENMEDVVLECKEEAINIFISAAQQEKKWASYLFKSGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
            +GLN     QY+++I N R H IG +  FK   NP PW+++ +
Sbjct: 297 MLGLNKDILCQYIEYITNIRMHAIGFKMPFKKQSNPIPWINDWL 340


>gi|311085920|gb|ADP66002.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. LL01 (Acyrthosiphon pisum)]
 gi|311086491|gb|ADP66572.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. TLW03 (Acyrthosiphon pisum)]
 gi|311087626|gb|ADP67705.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. JF98 (Acyrthosiphon pisum)]
          Length = 359

 Score = 95.9 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDVINQI----KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +      EN      E ++++  +   A   E  +A      G 
Sbjct: 220 RDEALHLTGTQHILNLLSNIKNNENMEDVVLECKEEAINIFISAAQQEKKWASYLFKSGS 279

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
            +GLN     QY+++I N R H IG +  FK   NP PW+++ +
Sbjct: 280 MLGLNKDILCQYIEYITNIRMHAIGFKMPFKKQSNPIPWINDWL 323


>gi|15079087|ref|NP_149839.1| 376L [Invertebrate iridescent virus 6]
 gi|82012049|sp|Q91FE8|RIR2_IIV6 RecName: Full=Probable ribonucleoside-diphosphate reductase small
           subunit 376L; AltName: Full=Ribonucleotide reductase
           small subunit
 gi|15042456|gb|AAK82236.1|AF303741_377 376L [Invertebrate iridescent virus 6]
          Length = 360

 Score = 95.9 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 55/148 (37%), Gaps = 26/148 (17%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTK----EFQQKSRTMLHEATLLEIAYAHETMPK--- 55
           DE+ H    I++      EN            Q+    +  E   LE A+      K   
Sbjct: 205 DETQHTEGMIELFKVFVEENKTGDQPIRPSVLQETVYKIAKEMVGLEEAFIDLVFKKYKD 264

Query: 56  ---------------GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMS 97
                           F GL     + Y+++IA+RR + +G + +F    Y  NP P + 
Sbjct: 265 EPINDDNDLETKDNKDFFGLTPQRLKAYIKYIADRRLNLMGYKSIFNLEPYPTNPLPELE 324

Query: 98  EVIDLKKEKNFFETRVTEYQ-QGAELKW 124
            +I+     NFFE R T+Y     +  W
Sbjct: 325 IMINAPTHTNFFENRSTDYANVSTKGTW 352


>gi|132618|sp|P26713|RIR2_ASFM2 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 327

 Score = 95.1 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG---FV 58
           RDE +H +F   +I+      P       ++    +L EA  L   + +    K      
Sbjct: 196 RDEGMHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFINYAFDKARGRVP 249

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE-VIDLKKEKNFFETRVTEYQ 117
           G +     QY+++  +  C  +  + ++    NPFP M++  ++  ++ NFFE R T+YQ
Sbjct: 250 GFSKEMLFQYIRYFTDNLCFMMQCKSIYN-VGNPFPQMTKFFLNEVEKTNFFELRPTQYQ 308


>gi|238897538|ref|YP_002923217.1| ribonucleoside-diphosphate reductase 1, beta subunit [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|229465295|gb|ACQ67069.1| ribonucleoside-diphosphate reductase 1, beta subunit [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 376

 Score = 94.7 bits (235), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     +++ ++   ++P +    +E QQ+   +   A   E  +A      G 
Sbjct: 237 RDEALHLMGTQHMLDLMRSGKDDPEMADIAQECQQECSDLFLLAAQQEKEWAAYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY++++ N R   + L+  F    NP PW+ S ++    +    E  V+ 
Sbjct: 297 MIGLNQDILCQYIEYMTNIRMQAVKLDAPFSIRTNPIPWINSWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|27904669|ref|NP_777795.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. Bp (Baizongia pistaciae)]
 gi|38605263|sp|Q89AS5|RIR2_BUCBP RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|27904066|gb|AAO26900.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera
           aphidicola str. Bp (Baizongia pistaciae)]
          Length = 376

 Score = 94.7 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENP----HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +  +         +KE  ++   +    +  E  +A      G 
Sbjct: 237 RDEALHLTSTQHILNILHNDKNNEGMSDISKECYEECYHLFIRVSDQEKIWAKYLFQNGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   IGL   FK   NP PW+ S +I    +    E  V+ 
Sbjct: 297 MLGLNQEILSQYIEYITNIRMKAIGLPSPFKILSNPIPWINSWLISDNVQVAPQEISVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|319779630|ref|YP_004130543.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Taylorella equigenitalis MCE9]
 gi|317109654|gb|ADU92400.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Taylorella equigenitalis MCE9]
          Length = 377

 Score = 94.7 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 6/105 (5%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +    ++P +     E + +   +   A   E A+A      G 
Sbjct: 237 RDEALHLTSTQHMLNIMSSGADDPEMAHIASELKNQCFELFKSAAEQEKAWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVI 100
            +GLN     QY+++I N R   +GLE  F  ++ NP PW++  +
Sbjct: 297 MIGLNKEILIQYVEYITNIRMSAVGLEEAFPQSKQNPIPWINTWL 341


>gi|325268103|ref|ZP_08134749.1| ribonucleotide-diphosphate reductase beta subunit [Kingella
           denitrificans ATCC 33394]
 gi|324980488|gb|EGC16154.1| ribonucleotide-diphosphate reductase beta subunit [Kingella
           denitrificans ATCC 33394]
          Length = 384

 Score = 94.7 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 6/106 (5%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   E        ++ QQ+   +  +A   E  +A      G 
Sbjct: 244 RDEALHLTSTQHMLNLMRGGSEGTEWAQIAQDLQQECFDLFVKAAEQEKEWASYLFKDGS 303

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   F   T+NP PW++  + 
Sbjct: 304 MIGLNKDILCQYVEYITNHRMLAVGLPVAFPKSTQNPIPWINAWLS 349


>gi|325103985|ref|YP_004273639.1| ribonucleotide reductase [Pedobacter saltans DSM 12145]
 gi|324972833|gb|ADY51817.1| ribonucleotide reductase [Pedobacter saltans DSM 12145]
          Length = 324

 Score = 94.7 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LN 61
           DE LH N GI +IN+IK E P    +  +Q+   ++ E+  +E          G +  +N
Sbjct: 194 DEQLHANAGIYIINKIKEEFPEYIDEAVEQEIYDIVTESINIEDEILGWIFENGDLEHIN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                 +M++  +    QIG + L+  +E   +P  W  E I      +FF  R  EY +
Sbjct: 254 RRDLLNFMKYRIDVSLQQIGFKKLYNVSETEYSPMVWFEEEIFANSLDDFFAKRPVEYTK 313


>gi|311977695|ref|YP_003986815.1| ribonucleoside-diphosphate reductase small chain [Acanthamoeba
           polyphaga mimivirus]
 gi|77416594|sp|Q7T6Y9|RIR2_MIMIV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|55664859|gb|AAQ09571.2| ribonucleotide reductase small subunit [Acanthamoeba polyphaga
           mimivirus]
 gi|308204332|gb|ADO18133.1| ribonucleoside-diphosphate reductase small chain [Acanthamoeba
           polyphaga mimivirus]
          Length = 417

 Score = 94.3 bits (234), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 57/118 (48%), Gaps = 9/118 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ H+     + +        L  +  +     ++ EA  +E  + ++++P   +G+N
Sbjct: 295 RDENKHVELACIMYSL-------LNNRLKESVVYQIIDEAIEIEEEFINDSLPCKLLGMN 347

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +    QY++++A+R    +G    F   +NPF +M + ID+  + NFFE R   Y   
Sbjct: 348 SELMSQYIKYVADRLLVDLGYRKKFN-VDNPFEYMKK-IDVFVKANFFEKRNDAYSNA 403


>gi|33152746|ref|NP_874099.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           ducreyi 35000HP]
 gi|33148970|gb|AAP96488.1| ribonucleoside-diphosphate reductase, beta chain [Haemophilus
           ducreyi 35000HP]
          Length = 376

 Score = 94.3 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE LHL     ++N I    ++P +     E QQ++  +   A   E  +A      G 
Sbjct: 237 RDEYLHLAGTQQMLNIIASGQDDPEMAEIAIECQQEAYDLFVAAAEQEKEWAEYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     +Y+++I N R   +GL   F    NP PW++  ++    +    E  V+ 
Sbjct: 297 MIGLNKEILVKYVEYITNIRMQSVGLPLPFATQSNPIPWINAWLVSDNVQVAPQEVEVSS 356

Query: 116 Y 116
           Y
Sbjct: 357 Y 357


>gi|162849254|emb|CAN10143.1| Ribonucleotide reductase small subunit [African swine fever virus
           Benin 97/1]
          Length = 327

 Score = 94.3 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG---FV 58
           RDE +H +F   +I+      P       ++    +L EA  L   + +    K      
Sbjct: 196 RDEGMHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFINYAFDKARGRVP 249

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE-VIDLKKEKNFFETRVTEYQ 117
           G +     QY+++  +  C  +  + ++K   NPFP M++  ++  ++ NFFE R T+YQ
Sbjct: 250 GFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEKTNFFELRPTQYQ 308


>gi|162849427|emb|CAN10392.1| Ribonucleotide reductase small subunit [African swine fever virus
           OURT 88/3]
 gi|291289488|emb|CBH29145.1| BA71V-F334L [African swine fever virus E75]
 gi|303398729|emb|CBW46710.1| F334L [African swine fever virus Georgia 2007/1]
          Length = 334

 Score = 93.9 bits (233), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG---FV 58
           RDE +H +F   +I+      P       ++    +L EA  L   + +    K      
Sbjct: 203 RDEGMHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFINYAFDKARGRVP 256

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE-VIDLKKEKNFFETRVTEYQ 117
           G +     QY+++  +  C  +  + ++K   NPFP M++  ++  ++ NFFE R T+YQ
Sbjct: 257 GFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEKTNFFELRPTQYQ 315


>gi|332292139|ref|YP_004430748.1| ATP-cone domain protein [Krokinobacter diaphorus 4H-3-7-5]
 gi|332170225|gb|AEE19480.1| ATP-cone domain protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 425

 Score = 93.9 bits (233), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 4/122 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62
           E +H +FGID+I  IK ENP  +  E     + M  EA   E          G +  L  
Sbjct: 296 EQIHGDFGIDIIKIIKAENPEWFDAEHSATVQEMCKEAFKAESNIVDWIFEAGELDFLPK 355

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQG 119
               ++++   N+    IG+EP+F+  E       W  + I   K  +FF  R   Y + 
Sbjct: 356 ALVNEFIKDRFNKSLTSIGIEPVFEVDETLLKDAEWFDDEIIGTKHGDFFVKRSVNYTKR 415

Query: 120 AE 121
           A+
Sbjct: 416 AQ 417


>gi|30984468|ref|NP_851900.1| ribonucleotide reductase subunit 2 [Macacine herpesvirus 1]
 gi|28804676|dbj|BAC58080.1| ribonucleotide reductase small subunit [Cercopithecine herpesvirus
           1]
 gi|30844282|gb|AAP41458.1| small subunit of ribonucleotide reductase [Macacine herpesvirus 1]
          Length = 338

 Score = 93.6 bits (232), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 7/119 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N     +     K   ++   +  EA  +EI +     P     L+
Sbjct: 217 RDEAVHTTASCYIYNNYLGGHR----KPTAERVYRLFREAVDIEIGFIRSQAPANSRVLD 272

Query: 62  A---PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
           A    + E Y++F A+R    I ++PLF        +   ++  +K  NFFE R T Y 
Sbjct: 273 AAALDAIENYVRFSADRLLVLIKMKPLFGAPAPAPSFPLSLMSTEKHTNFFECRSTAYA 331


>gi|270339459|ref|YP_003331539.1| ribonucleotide reductase subunit 2 [Felid herpesvirus 1]
 gi|254940175|gb|ACT88318.1| ribonucleotide reductase subunit 2 [Felid herpesvirus 1]
          Length = 331

 Score = 93.2 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 6/117 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N           K   ++  ++  EA  LE  +     P+    LN
Sbjct: 213 RDEAIHTTASCCIYNNYLPAQI----KPSTERIHSLFREAVELECEFISTCAPRCSNLLN 268

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
                 Y+++ A+R    I + P+F     +P  +    + ++K  NFFE   T Y 
Sbjct: 269 VADICNYVRYSADRLLGIIKVAPIFNVPPPHP-DFPLAFMVIEKHTNFFERHSTTYS 324


>gi|212712302|ref|ZP_03320430.1| hypothetical protein PROVALCAL_03388 [Providencia alcalifaciens DSM
           30120]
 gi|212685048|gb|EEB44576.1| hypothetical protein PROVALCAL_03388 [Providencia alcalifaciens DSM
           30120]
          Length = 380

 Score = 93.2 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPH----LWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++             E +++   +  +A   E  +A     +G 
Sbjct: 241 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEEECYRLFVDAAEQEKEWAEYLFSEGS 300

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 301 MIGLNKDILCQYVEYITNIRMQAVGLKLPFEARSNPIPWINAWLVSDNVQVAPQEVEVSS 360

Query: 116 Y 116
           Y
Sbjct: 361 Y 361


>gi|3183695|emb|CAA07027.1| ribonucleotide reductase small subunit [Felid herpesvirus 1]
          Length = 331

 Score = 93.2 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 12/120 (10%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N           K   ++  ++  EA  LE  +     P+    LN
Sbjct: 213 RDEAIHTTASCCIYNNYLPAQI----KPSTERIHSLFREAVELECEFISTCAPRCSNLLN 268

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---N-PFPWMSEVIDLKKEKNFFETRVTEYQ 117
                 Y+++ A+R    I + P+F       N P  +M     ++K  NFFE   T Y 
Sbjct: 269 VADICNYVRYSADRLLGIIKVAPIFNVPPPHPNFPLAFMV----IEKHTNFFEKHSTTYS 324


>gi|326536452|ref|YP_004300883.1| NrdB aerobic ribonucleoside diphosphate reductase small subunit
           [Aeromonas phage 65]
 gi|312262798|gb|ADQ53054.1| NrdB aerobic ribonucleoside diphosphate reductase small subunit
           [Aeromonas phage 65]
          Length = 376

 Score = 92.8 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 5/105 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKGF 57
           RDE+LHL     +I++ +   ++P +    K  + K+ ++  E    E  +A   M    
Sbjct: 237 RDENLHLKATQTIISRWQTGKDDPEMVEIAKRLEGKAVSIFEEVVAQEKEWAEYLMGDKS 296

Query: 58  V-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101
           + GLN      Y++++A+ R    GL   +   +NP PW+++ ++
Sbjct: 297 LNGLNRDVLCNYIEYLADNRMRSAGLPSSYAKRKNPLPWVTKWLN 341


>gi|9628152|ref|NP_042738.1| ribonucleotide reductase small subunit [African swine fever virus]
 gi|1172939|sp|P42492|RIR2_ASFB7 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|780414|gb|AAA65274.1| ribonucleotide reductase small subunit [African swine fever virus]
 gi|1097433|prf||2113434AT ribonucleotide reductase:SUBUNIT=small
          Length = 334

 Score = 92.4 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG---FV 58
           RDE +H +F   +I+      P       ++    +L EA  L   + +    K      
Sbjct: 203 RDEGVHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFINYAFDKARGRVP 256

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE-VIDLKKEKNFFETRVTEYQ 117
           G +     QY+++  +  C  +  + ++K   NPFP M++  ++  ++ NFFE R T+YQ
Sbjct: 257 GFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEKTNFFELRPTQYQ 315


>gi|59912|emb|CAA24930.1| unnamed protein product [Human herpesvirus 2]
          Length = 337

 Score = 92.4 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N    +      K    +   +  EA  +EI +     P     L+
Sbjct: 216 RDEAVHTTASCYIYNNYLGD----HAKPEAARVYRLFREAVDIEIGFIRSQAPTDSSILS 271

Query: 62  A---PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                + E Y++F A+R    I ++PL+        +   ++   K  NFFE R T Y  
Sbjct: 272 PGALAAIENYVRFSADRLLGLIHMQPLYSAPAPDASFPLSLMSTDKHTNFFECRSTSYA- 330

Query: 119 GAELKW 124
           GA +  
Sbjct: 331 GAVVND 336


>gi|215275539|sp|P0C8I1|RIR2_ASFP4 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 327

 Score = 92.4 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG---FV 58
           RDE +H +F   +I+      P       ++    +L EA  L   + +    K      
Sbjct: 196 RDEGVHCSFACFLISNYVYNIPE------ERIIHKILKEAVELVDEFINYAFDKARGRVP 249

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE-VIDLKKEKNFFETRVTEYQ 117
           G +     QY+++  +  C  +  + ++K   NPFP M++  ++  ++ NFFE R T+YQ
Sbjct: 250 GFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEKTNFFELRPTQYQ 308


>gi|83722609|ref|YP_443887.1| ribonucleotide reductase subunit 2 [Papiine herpesvirus 2]
 gi|75905762|gb|ABA29294.1| UL40 [Papiine herpesvirus 2]
          Length = 339

 Score = 92.4 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 7/119 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N     +     K   ++   +  EA  +EI +     P     L+
Sbjct: 218 RDEAVHTTASCYIYNNYLAGHR----KPEPERVYRLFREAVEIEIGFIRSQAPADSRILD 273

Query: 62  APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
           A +    E Y++F A+R    I ++PLF        +   ++  +K  NFFE R T Y 
Sbjct: 274 AAALAAIENYVRFSADRLLALIEMKPLFGAPAPAPSFPLNLMSTEKHTNFFERRSTAYA 332


>gi|70937204|ref|XP_739440.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56516443|emb|CAH87750.1| hypothetical protein PC302623.00.0 [Plasmodium chabaudi chabaudi]
          Length = 72

 Score = 92.0 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 2/60 (3%)

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122
               QY++F+A+R    +G   +F +++NPF WM  +I L+ + NFFE RV +YQ+   +
Sbjct: 1   RLMSQYIEFVADRLLECLGCSKVF-HSKNPFSWMD-LISLQGKTNFFEKRVADYQKSGVM 58


>gi|215275540|sp|P0C8I2|RIR2_ASFWA RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 327

 Score = 92.0 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG---FV 58
           RDE +H +F   +I+      P       ++    +L EA  L   +      K      
Sbjct: 196 RDEGVHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFISYAFDKARGRVP 249

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE-VIDLKKEKNFFETRVTEYQ 117
           G +     QY+++  +  C  +  + ++K   NPFP M++  ++  ++ NFFE R T+YQ
Sbjct: 250 GFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEKTNFFELRPTQYQ 308


>gi|56694763|ref|YP_164483.1| ribonucleotide reductase subunit 2 [Cercopithecine herpesvirus 2]
 gi|52843315|gb|AAU88106.1| small subunit of ribonucleotide reductase [Cercopithecine
           herpesvirus 2]
          Length = 325

 Score = 92.0 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 7/119 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N           K   ++   +  EA  +EI +     P     L+
Sbjct: 204 RDEAVHTTASCYIYNNYLAG----HHKPEPERVYRLFREAVEIEIGFIRSQAPADSRILD 259

Query: 62  APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
           A +    E Y++F A+R    I ++PLF        +   ++  +K  NFFE R T Y 
Sbjct: 260 AAALAAIENYVRFSADRLLALIRMKPLFGAPAPAPSFPLSLMSTEKHTNFFECRSTAYA 318


>gi|21672460|ref|NP_660527.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. Sg (Schizaphis graminum)]
 gi|25091143|sp|Q8K9W4|RIR2_BUCAP RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|21623075|gb|AAM67738.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera
           aphidicola str. Sg (Schizaphis graminum)]
          Length = 376

 Score = 91.6 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 5/105 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTK----EFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N +  E  +   K    E ++++  +   A+  E  +A      G 
Sbjct: 237 RDEALHLTGTQHILNILNNEKNNENMKNTVLECREEAIKIFISASEQEKKWAKYLFQDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101
            +GLN     QY+++I N R H IG +  F+ T NP PW++  ++
Sbjct: 297 MLGLNKDILCQYIEYITNIRMHAIGFKMPFEKTSNPIPWINSWLN 341


>gi|38638230|ref|NP_944413.1| ribonucleotide reductase subunit 2 [Psittacid herpesvirus 1]
 gi|81987371|sp|Q6UDJ1|RIR2_PSHV1 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|34500236|gb|AAQ73719.1| unknown [Psittacid herpesvirus 1]
          Length = 313

 Score = 91.6 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 4/116 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N     +P    K   ++   +  EA  +E  +     PK    ++
Sbjct: 195 RDETIHTTASCCIYNNWLKGHP----KPSVKRIHQLFKEAVEIECDFLVARAPKAARLID 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
             + + +++F ANR    IG+  ++        +   ++ L+K  NFFE R T Y 
Sbjct: 251 IDAIQSFVRFTANRWLSMIGVPTIYDDPAPDPTFPLALMSLEKNVNFFEHRSTAYS 306


>gi|319760602|ref|YP_004124540.1| ribonucleoside-diphosphate reductase 1 subunit beta [Candidatus
           Blochmannia vafer str. BVAF]
 gi|318039316|gb|ADV33866.1| ribonucleoside-diphosphate reductase 1 subunit beta [Candidatus
           Blochmannia vafer str. BVAF]
          Length = 376

 Score = 91.6 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLWTKEF--QQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDESLHL+    ++N ++   ++P +       Q +S  +   A   E  +AH     G 
Sbjct: 237 RDESLHLSATQHILNLMQSGADDPEMAEISLMYQSESYNLFLMAAEQEKMWAHYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   IGL+  F    N  PW+ S ++    +    E   + 
Sbjct: 297 MIGLNKEILCQYIEYITNIRMQAIGLKAPFHIKANVIPWINSWLVSDNVQVAPQEVESSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q   ++  D
Sbjct: 357 YLVGQINTQINDD 369


>gi|94676795|ref|YP_588829.1| ribonucleotide-diphosphate reductase subunit beta [Baumannia
           cicadellinicola str. Hc (Homalodisca coagulata)]
 gi|94219945|gb|ABF14104.1| ribonucleoside-diphosphate reductase, beta subunit [Baumannia
           cicadellinicola str. Hc (Homalodisca coagulata)]
          Length = 376

 Score = 91.2 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 9/133 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLWTK--EFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL     ++N ++   ++P +     E Q  S  +   A   E  +A      G 
Sbjct: 237 RDEALHLAGTQHMLNLMRLGKDDPEMADIALECQHDSYHLFLXAANQEKDWASYLFRDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   + L+  F    NP PW+ S ++    +    E  V+ 
Sbjct: 297 MIGLNEEILCQYIEYITNIRMQAVLLDLPFATRSNPIPWINSWLVSDNVQVAPQEVEVSS 356

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 357 YLVGQINSEVNSD 369


>gi|307107666|gb|EFN55908.1| hypothetical protein CHLNCDRAFT_57791 [Chlorella variabilis]
          Length = 849

 Score = 90.9 bits (225), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 7/96 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H+     + + ++       +K    +++ ++ EA   E A+    +P    GL 
Sbjct: 756 RDEGVHVESAGVMYSLLR-------SKLTDSQAQGIVGEAVEAERAFVCGQLPLEATGLE 808

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
           A + E+Y+Q++ +R    +G  PL++   NP PW+ 
Sbjct: 809 AGAMEEYLQYVGDRLLGALGHAPLYRVAANPLPWLE 844


>gi|9629310|ref|NP_044510.1| ribonucleotide reductase subunit 2 [Human herpesvirus 2]
 gi|61231410|sp|P69520|RIR2_HHV23 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase 38 kDa subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|61231418|sp|P69521|RIR2_HHV2H RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           Short=R2; AltName: Full=Ribonucleotide reductase 38 kDa
           subunit; AltName: Full=Ribonucleotide reductase small
           subunit
 gi|330200|gb|AAA45807.1| 38K protein [Human herpesvirus 2]
 gi|1869863|emb|CAB06726.1| ribonucleotide reductase small subunit [Human herpesvirus 2]
 gi|224613173|dbj|BAH24264.1| ribonucleotide reductase small subunit [Human herpesvirus 2]
 gi|224613175|dbj|BAH24265.1| ribonucleotide reductase small subunit [Human herpesvirus 2]
          Length = 337

 Score = 90.9 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N           K    +   +  EA  +EI +     P     L+
Sbjct: 216 RDEAVHTTASCYIYNNYLGG----HAKPEAARVYRLFREAVDIEIGFIRSQAPTDSSILS 271

Query: 62  A---PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                + E Y++F A+R    I ++PL+        +   ++   K  NFFE R T Y  
Sbjct: 272 PGALAAIENYVRFSADRLLGLIHMQPLYSAPAPDASFPLSLMSTDKHTNFFECRSTSYA- 330

Query: 119 GAELKW 124
           GA +  
Sbjct: 331 GAVVND 336


>gi|290766061|gb|ADD60039.1| ribonucleotide reductase subunit 2 [Human herpesvirus 1]
          Length = 340

 Score = 90.9 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N           K    +   +  +A  +EI +     P     L+
Sbjct: 219 RDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 274

Query: 62  APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
             +    E Y++F A+R    I ++PLF        +   ++   K  NFFE R T Y  
Sbjct: 275 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA- 333

Query: 119 GAELKW 124
           GA +  
Sbjct: 334 GAVVND 339


>gi|222478371|gb|ACM62263.1| ribonucleotide reductase subunit 2 [Human herpesvirus 1]
          Length = 340

 Score = 90.9 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N           K    +   +  +A  +EI +     P     L+
Sbjct: 219 RDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 274

Query: 62  APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
             +    E Y++F A+R    I ++PLF        +   ++   K  NFFE R T Y  
Sbjct: 275 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA- 333

Query: 119 GAELKW 124
           GA +  
Sbjct: 334 GAVVND 339


>gi|222475861|ref|YP_002564382.1| ribonucleotide reductase [Halorubrum lacusprofundi ATCC 49239]
 gi|222454232|gb|ACM58496.1| ribonucleotide reductase [Halorubrum lacusprofundi ATCC 49239]
          Length = 336

 Score = 90.9 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 58/122 (47%), Gaps = 4/122 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62
           E +H  FG+++++ I+ ENP L+  EF+ + R     A   E+        +G +  L  
Sbjct: 207 EQIHGLFGVELVDTIREENPGLFDDEFEAEIREACRRAYEAEMGMLDWIFGEGELQFLPR 266

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQG 119
               ++++   N+    +G+ P+F+  ++      W  E I + K+ +FF  R T Y + 
Sbjct: 267 EYVNEFLKDRFNQSLENVGVYPMFETDDDLLDETRWFDEDIMMTKDNDFFSKRSTTYNKH 326

Query: 120 AE 121
            +
Sbjct: 327 TQ 328


>gi|9625893|ref|NP_040141.1| ribonucleotide reductase subunit 2 [Human herpesvirus 3]
 gi|132630|sp|P09247|RIR2_VZVD RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           Short=R2; AltName: Full=Ribonucleotide reductase small
           subunit
 gi|259645448|sp|Q4JQV7|RIR2_VZVO RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           Short=R2; AltName: Full=Ribonucleotide reductase small
           subunit
 gi|60007|emb|CAA27901.1| ribonucleotide reductase (small subunit) [Human herpesvirus 3
           strain Dumas]
 gi|46981429|gb|AAT07700.1| ribonucleotide reductase small subunit [Human herpesvirus 3]
 gi|46981500|gb|AAT07776.1| ribonucleotide reductase small subunit [Human herpesvirus 3]
 gi|66865986|gb|AAY57634.1| ORF18 [Human herpesvirus 3]
 gi|66866058|gb|AAY57705.1| ORF18 [Human herpesvirus 3]
 gi|83721826|emb|CAI44861.1| ribonucleotide reductase small subunit [Human herpesvirus 3]
 gi|90992817|gb|ABE03036.1| ribonucleotide reductase small subunit [Human herpesvirus 3]
 gi|91980319|gb|ABE67126.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94481816|gb|ABF21518.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94481890|gb|ABF21591.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94481964|gb|ABF21664.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94482038|gb|ABF21737.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94482112|gb|ABF21810.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94482186|gb|ABF21883.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94482260|gb|ABF21956.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94482334|gb|ABF22029.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94482408|gb|ABF22102.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94482482|gb|ABF22175.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94482556|gb|ABF22248.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|111184743|gb|ABH08451.1| ribonucleotide reductase small subunit [Human herpesvirus 3]
 gi|157965778|gb|ABW06924.1| ribonucleotide reductase small subunit [Human herpesvirus 3]
          Length = 306

 Score = 90.5 bits (224), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 7/116 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H +    + N    E P +       +   +  EA  +E A+     PK  + +N
Sbjct: 191 RDEAIHTSASCCIYNNYVPEKPAI------TRIHQLFSEAVEIECAFLKSHAPKTRL-VN 243

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
             +  QY++F A+R    I +  LF        +    +   K  NFFE   T Y 
Sbjct: 244 VDAITQYVKFSADRLLSAINVPKLFNTPPPDSDFPLAFMIADKNTNFFERHSTSYA 299


>gi|1172944|sp|P06474|RIR2_HHV1K RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase 38 kDa subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|807641|gb|AAA66436.1| unknown protein [Human herpesvirus 1]
          Length = 340

 Score = 90.5 bits (224), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N           K    +   +  +A  +EI +     P     L+
Sbjct: 219 RDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 274

Query: 62  APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
             +    E Y++F A+R    I ++PLF        +   ++   K  NFFE R T Y  
Sbjct: 275 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA- 333

Query: 119 GAELKW 124
           GA +  
Sbjct: 334 GAVVND 339


>gi|114318828|gb|ABI63502.1| UL40 [Human herpesvirus 1]
 gi|290766139|gb|ADD60116.1| ribonucleotide reductase subunit 2 [Human herpesvirus 1]
          Length = 340

 Score = 90.5 bits (224), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N           K    +   +  +A  +EI +     P     L+
Sbjct: 219 RDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 274

Query: 62  APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
             +    E Y++F A+R    I ++PLF        +   ++   K  NFFE R T Y  
Sbjct: 275 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA- 333

Query: 119 GAELKW 124
           GA +  
Sbjct: 334 GAVVND 339


>gi|9629421|ref|NP_044642.1| ribonucleotide reductase subunit 2 [Human herpesvirus 1]
 gi|132622|sp|P10224|RIR2_HHV11 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           Short=R2; AltName: Full=Ribonucleotide reductase 38 kDa
           subunit; AltName: Full=Ribonucleotide reductase small
           subunit; Flags: Precursor
 gi|59540|emb|CAA32303.1| ribonucleotide reductase small subunit [Human herpesvirus 1]
          Length = 340

 Score = 90.5 bits (224), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N           K    +   +  +A  +EI +     P     L+
Sbjct: 219 RDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 274

Query: 62  APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
             +    E Y++F A+R    I ++PLF        +   ++   K  NFFE R T Y  
Sbjct: 275 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA- 333

Query: 119 GAELKW 124
           GA +  
Sbjct: 334 GAVVND 339


>gi|207108882|ref|ZP_03243044.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori HPKX_438_CA4C1]
          Length = 79

 Score = 90.1 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 2/78 (2%)

Query: 49  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KN 107
                    +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  N
Sbjct: 2   GDYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSN 60

Query: 108 FFETRVTEYQQGAELKWD 125
           FFE RV+ Y +G+    D
Sbjct: 61  FFEARVSNYAKGSVSFDD 78


>gi|163786628|ref|ZP_02181076.1| ribonucleoside-diphosphate reductase , beta subunit 1
           [Flavobacteriales bacterium ALC-1]
 gi|159878488|gb|EDP72544.1| ribonucleoside-diphosphate reductase , beta subunit 1
           [Flavobacteriales bacterium ALC-1]
          Length = 429

 Score = 89.7 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 4/119 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62
           E++H +FGID+I  IK ENP  +  E  +  R +  EA   E          G +  L  
Sbjct: 300 ENIHGDFGIDIIKIIKAENPTWFDAEHNEIVRELCREAFASESELVDWIFEAGELEFLPK 359

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQQ 118
               ++++   N     IG+E +F   E       W  + I   K  +FF  R   Y +
Sbjct: 360 DVINEFLKNRFNNSLESIGIEKVFDVDETLLTQTEWFDDEIIGTKHGDFFVKRSINYSK 418


>gi|30960813|gb|AAP39214.1| UL40 [Human herpesvirus 1]
 gi|30960819|gb|AAP39218.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score = 89.7 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 7/119 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N           K   ++   +  +A  +EI +     P     L+
Sbjct: 186 RDEAVHTTASCYIYNNYLGG----HAKPPPERVYGLFRQAVEIEIGFIRSQAPTDSHILS 241

Query: 62  APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
             +    E Y++F A+R    I ++PLF        +   ++   K  NFFE R T Y 
Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA 300


>gi|30960831|gb|AAP39226.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score = 89.7 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 7/119 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N           K   ++   +  +A  +EI +     P     L+
Sbjct: 186 RDEAVHTTASCYIYNNYLGG----HAKPPPERVYGLFRQAVEIEIGFIRSQAPTDSHILS 241

Query: 62  APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
             +    E Y++F A+R    I ++PLF        +   ++   K  NFFE R T Y 
Sbjct: 242 PAALVAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA 300


>gi|159146681|gb|ABW90785.1| ribonucleotide reductase subunit 2 [Leporid herpesvirus 4]
          Length = 316

 Score = 89.7 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 7/119 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG---FV 58
           RDE++H      + N    +      K   ++ + +   A  +EIA+     P       
Sbjct: 195 RDEAVHTTASCCLYNNYLGQY----AKPPSERIKQLFSNAVEIEIAFIKAKAPANSRILD 250

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
           G    + E Y++F A+R    IG   LF        +   ++  +K  NFFE R T Y 
Sbjct: 251 GAAIAAIESYVRFSADRLLKLIGEPALFDEPPPNDGFPLRLMSTEKHTNFFECRSTAYA 309


>gi|221783|dbj|BAA00748.1| UL40 [Human herpesvirus 2]
          Length = 262

 Score = 89.3 bits (221), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 7/119 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N           K    +   +  EA  +EI +     P     L+
Sbjct: 141 RDEAVHTTASCYIYNNYLGG----HAKPEAARVYRLFREAVDIEIGFIRSQAPTDSSILS 196

Query: 62  A---PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
                + E Y++F A+R    I ++PL+        +   ++   K  NFFE R T Y 
Sbjct: 197 PGALAAIENYVRFSADRLLGLIHMQPLYSAPAPDASFPLSLMSTDKHTNFFECRSTSYA 255


>gi|301750612|gb|ADK88940.1| ribonucleotide reductase subunit 2 [Leporid herpesvirus 4]
          Length = 316

 Score = 89.3 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 7/119 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG---FV 58
           RDE++H      + N    +      K   ++ + +   A  +EIA+     P       
Sbjct: 195 RDEAVHTTASCCLYNNYLGQY----AKPPSERIKQLFSNAVEIEIAFIKAKAPANSRILD 250

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
           G    + E Y++F A+R    IG   LF        +   ++  +K  NFFE R T Y 
Sbjct: 251 GAAIAAIESYVRFSADRLLKLIGEPALFDEPPPNDGFPLRLMSTEKHTNFFECRSTAYA 309


>gi|22550280|gb|AAN01603.1| ribonucleotide reductase small subunit [Human herpesvirus 2 strain
           G]
          Length = 342

 Score = 89.3 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 12/129 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N           K    +   +  EA  +EI +     P     L+
Sbjct: 219 RDEAVHTTASCYIYNNYLGG----HAKPEAARVYRLFREAVDIEIGFIRSQAPTDSSILS 274

Query: 62  A---PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTE 115
                + E Y++F A+R    I ++PL+  +  P P   +   ++   K  NFFE R T 
Sbjct: 275 PGALAAIENYVRFSADRLLGLIHMQPLYSASA-PAPDASFPLSLMSTDKHTNFFECRSTS 333

Query: 116 YQQGAELKW 124
           Y  GA +  
Sbjct: 334 YA-GAVVND 341


>gi|30960231|gb|AAP38826.1| UL40 [Human herpesvirus 1]
 gi|30960234|gb|AAP38828.1| UL40 [Human herpesvirus 1]
 gi|30960237|gb|AAP38830.1| UL40 [Human herpesvirus 1]
 gi|30960240|gb|AAP38832.1| UL40 [Human herpesvirus 1]
 gi|30960243|gb|AAP38834.1| UL40 [Human herpesvirus 1]
 gi|30960246|gb|AAP38836.1| UL40 [Human herpesvirus 1]
 gi|30960249|gb|AAP38838.1| UL40 [Human herpesvirus 1]
 gi|30960252|gb|AAP38840.1| UL40 [Human herpesvirus 1]
 gi|30960255|gb|AAP38842.1| UL40 [Human herpesvirus 1]
 gi|30960258|gb|AAP38844.1| UL40 [Human herpesvirus 1]
 gi|30960261|gb|AAP38846.1| UL40 [Human herpesvirus 1]
 gi|30960264|gb|AAP38848.1| UL40 [Human herpesvirus 1]
 gi|30960267|gb|AAP38850.1| UL40 [Human herpesvirus 1]
 gi|30960270|gb|AAP38852.1| UL40 [Human herpesvirus 1]
 gi|30960273|gb|AAP38854.1| UL40 [Human herpesvirus 1]
 gi|30960276|gb|AAP38856.1| UL40 [Human herpesvirus 1]
 gi|30960279|gb|AAP38858.1| UL40 [Human herpesvirus 1]
 gi|30960282|gb|AAP38860.1| UL40 [Human herpesvirus 1]
 gi|30960285|gb|AAP38862.1| UL40 [Human herpesvirus 1]
 gi|30960288|gb|AAP38864.1| UL40 [Human herpesvirus 1]
 gi|30960291|gb|AAP38866.1| UL40 [Human herpesvirus 1]
 gi|30960294|gb|AAP38868.1| UL40 [Human herpesvirus 1]
 gi|30960297|gb|AAP38870.1| UL40 [Human herpesvirus 1]
 gi|30960300|gb|AAP38872.1| UL40 [Human herpesvirus 1]
 gi|30960303|gb|AAP38874.1| UL40 [Human herpesvirus 1]
 gi|30960306|gb|AAP38876.1| UL40 [Human herpesvirus 1]
 gi|30960309|gb|AAP38878.1| UL40 [Human herpesvirus 1]
 gi|30960312|gb|AAP38880.1| UL40 [Human herpesvirus 1]
 gi|30960315|gb|AAP38882.1| UL40 [Human herpesvirus 1]
 gi|30960318|gb|AAP38884.1| UL40 [Human herpesvirus 1]
 gi|30960321|gb|AAP38886.1| UL40 [Human herpesvirus 1]
 gi|30960324|gb|AAP38888.1| UL40 [Human herpesvirus 1]
 gi|30960327|gb|AAP38890.1| UL40 [Human herpesvirus 1]
 gi|30960330|gb|AAP38892.1| UL40 [Human herpesvirus 1]
 gi|30960333|gb|AAP38894.1| UL40 [Human herpesvirus 1]
 gi|30960336|gb|AAP38896.1| UL40 [Human herpesvirus 1]
 gi|30960339|gb|AAP38898.1| UL40 [Human herpesvirus 1]
 gi|30960342|gb|AAP38900.1| UL40 [Human herpesvirus 1]
 gi|30960345|gb|AAP38902.1| UL40 [Human herpesvirus 1]
 gi|30960348|gb|AAP38904.1| UL40 [Human herpesvirus 1]
 gi|30960351|gb|AAP38906.1| UL40 [Human herpesvirus 1]
 gi|30960354|gb|AAP38908.1| UL40 [Human herpesvirus 1]
 gi|30960357|gb|AAP38910.1| UL40 [Human herpesvirus 1]
 gi|30960360|gb|AAP38912.1| UL40 [Human herpesvirus 1]
 gi|30960363|gb|AAP38914.1| UL40 [Human herpesvirus 1]
 gi|30960366|gb|AAP38916.1| UL40 [Human herpesvirus 1]
 gi|30960369|gb|AAP38918.1| UL40 [Human herpesvirus 1]
 gi|30960372|gb|AAP38920.1| UL40 [Human herpesvirus 1]
 gi|30960375|gb|AAP38922.1| UL40 [Human herpesvirus 1]
 gi|30960378|gb|AAP38924.1| UL40 [Human herpesvirus 1]
 gi|30960381|gb|AAP38926.1| UL40 [Human herpesvirus 1]
 gi|30960384|gb|AAP38928.1| UL40 [Human herpesvirus 1]
 gi|30960387|gb|AAP38930.1| UL40 [Human herpesvirus 1]
 gi|30960390|gb|AAP38932.1| UL40 [Human herpesvirus 1]
 gi|30960393|gb|AAP38934.1| UL40 [Human herpesvirus 1]
 gi|30960396|gb|AAP38936.1| UL40 [Human herpesvirus 1]
 gi|30960399|gb|AAP38938.1| UL40 [Human herpesvirus 1]
 gi|30960402|gb|AAP38940.1| UL40 [Human herpesvirus 1]
 gi|30960405|gb|AAP38942.1| UL40 [Human herpesvirus 1]
 gi|30960408|gb|AAP38944.1| UL40 [Human herpesvirus 1]
 gi|30960411|gb|AAP38946.1| UL40 [Human herpesvirus 1]
 gi|30960414|gb|AAP38948.1| UL40 [Human herpesvirus 1]
 gi|30960417|gb|AAP38950.1| UL40 [Human herpesvirus 1]
 gi|30960432|gb|AAP38960.1| UL40 [Human herpesvirus 1]
 gi|30960435|gb|AAP38962.1| UL40 [Human herpesvirus 1]
 gi|30960438|gb|AAP38964.1| UL40 [Human herpesvirus 1]
 gi|30960441|gb|AAP38966.1| UL40 [Human herpesvirus 1]
 gi|30960444|gb|AAP38968.1| UL40 [Human herpesvirus 1]
 gi|30960447|gb|AAP38970.1| UL40 [Human herpesvirus 1]
 gi|30960450|gb|AAP38972.1| UL40 [Human herpesvirus 1]
 gi|30960453|gb|AAP38974.1| UL40 [Human herpesvirus 1]
 gi|30960456|gb|AAP38976.1| UL40 [Human herpesvirus 1]
 gi|30960459|gb|AAP38978.1| UL40 [Human herpesvirus 1]
 gi|30960462|gb|AAP38980.1| UL40 [Human herpesvirus 1]
 gi|30960471|gb|AAP38986.1| UL40 [Human herpesvirus 1]
 gi|30960474|gb|AAP38988.1| UL40 [Human herpesvirus 1]
 gi|30960477|gb|AAP38990.1| UL40 [Human herpesvirus 1]
 gi|30960480|gb|AAP38992.1| UL40 [Human herpesvirus 1]
 gi|30960483|gb|AAP38994.1| UL40 [Human herpesvirus 1]
 gi|30960486|gb|AAP38996.1| UL40 [Human herpesvirus 1]
 gi|30960489|gb|AAP38998.1| UL40 [Human herpesvirus 1]
 gi|30960495|gb|AAP39002.1| UL40 [Human herpesvirus 1]
 gi|30960498|gb|AAP39004.1| UL40 [Human herpesvirus 1]
 gi|30960501|gb|AAP39006.1| UL40 [Human herpesvirus 1]
 gi|30960504|gb|AAP39008.1| UL40 [Human herpesvirus 1]
 gi|30960507|gb|AAP39010.1| UL40 [Human herpesvirus 1]
 gi|30960510|gb|AAP39012.1| UL40 [Human herpesvirus 1]
 gi|30960513|gb|AAP39014.1| UL40 [Human herpesvirus 1]
 gi|30960516|gb|AAP39016.1| UL40 [Human herpesvirus 1]
 gi|30960519|gb|AAP39018.1| UL40 [Human herpesvirus 1]
 gi|30960522|gb|AAP39020.1| UL40 [Human herpesvirus 1]
 gi|30960528|gb|AAP39024.1| UL40 [Human herpesvirus 1]
 gi|30960531|gb|AAP39026.1| UL40 [Human herpesvirus 1]
 gi|30960534|gb|AAP39028.1| UL40 [Human herpesvirus 1]
 gi|30960537|gb|AAP39030.1| UL40 [Human herpesvirus 1]
 gi|30960540|gb|AAP39032.1| UL40 [Human herpesvirus 1]
 gi|30960543|gb|AAP39034.1| UL40 [Human herpesvirus 1]
 gi|30960546|gb|AAP39036.1| UL40 [Human herpesvirus 1]
 gi|30960549|gb|AAP39038.1| UL40 [Human herpesvirus 1]
 gi|30960552|gb|AAP39040.1| UL40 [Human herpesvirus 1]
 gi|30960555|gb|AAP39042.1| UL40 [Human herpesvirus 1]
 gi|30960558|gb|AAP39044.1| UL40 [Human herpesvirus 1]
 gi|30960561|gb|AAP39046.1| UL40 [Human herpesvirus 1]
 gi|30960564|gb|AAP39048.1| UL40 [Human herpesvirus 1]
 gi|30960567|gb|AAP39050.1| UL40 [Human herpesvirus 1]
 gi|30960570|gb|AAP39052.1| UL40 [Human herpesvirus 1]
 gi|30960573|gb|AAP39054.1| UL40 [Human herpesvirus 1]
 gi|30960576|gb|AAP39056.1| UL40 [Human herpesvirus 1]
 gi|30960579|gb|AAP39058.1| UL40 [Human herpesvirus 1]
 gi|30960582|gb|AAP39060.1| UL40 [Human herpesvirus 1]
 gi|30960585|gb|AAP39062.1| UL40 [Human herpesvirus 1]
 gi|30960588|gb|AAP39064.1| UL40 [Human herpesvirus 1]
 gi|30960591|gb|AAP39066.1| UL40 [Human herpesvirus 1]
 gi|30960594|gb|AAP39068.1| UL40 [Human herpesvirus 1]
 gi|30960597|gb|AAP39070.1| UL40 [Human herpesvirus 1]
 gi|30960600|gb|AAP39072.1| UL40 [Human herpesvirus 1]
 gi|30960603|gb|AAP39074.1| UL40 [Human herpesvirus 1]
 gi|30960606|gb|AAP39076.1| UL40 [Human herpesvirus 1]
 gi|30960609|gb|AAP39078.1| UL40 [Human herpesvirus 1]
 gi|30960612|gb|AAP39080.1| UL40 [Human herpesvirus 1]
 gi|30960615|gb|AAP39082.1| UL40 [Human herpesvirus 1]
 gi|30960618|gb|AAP39084.1| UL40 [Human herpesvirus 1]
 gi|30960621|gb|AAP39086.1| UL40 [Human herpesvirus 1]
 gi|30960624|gb|AAP39088.1| UL40 [Human herpesvirus 1]
 gi|30960627|gb|AAP39090.1| UL40 [Human herpesvirus 1]
 gi|30960630|gb|AAP39092.1| UL40 [Human herpesvirus 1]
 gi|30960633|gb|AAP39094.1| UL40 [Human herpesvirus 1]
 gi|30960636|gb|AAP39096.1| UL40 [Human herpesvirus 1]
 gi|30960639|gb|AAP39098.1| UL40 [Human herpesvirus 1]
 gi|30960642|gb|AAP39100.1| UL40 [Human herpesvirus 1]
 gi|30960645|gb|AAP39102.1| UL40 [Human herpesvirus 1]
 gi|30960648|gb|AAP39104.1| UL40 [Human herpesvirus 1]
 gi|30960651|gb|AAP39106.1| UL40 [Human herpesvirus 1]
 gi|30960657|gb|AAP39110.1| UL40 [Human herpesvirus 1]
 gi|30960660|gb|AAP39112.1| UL40 [Human herpesvirus 1]
 gi|30960663|gb|AAP39114.1| UL40 [Human herpesvirus 1]
 gi|30960666|gb|AAP39116.1| UL40 [Human herpesvirus 1]
 gi|30960669|gb|AAP39118.1| UL40 [Human herpesvirus 1]
 gi|30960672|gb|AAP39120.1| UL40 [Human herpesvirus 1]
 gi|30960675|gb|AAP39122.1| UL40 [Human herpesvirus 1]
 gi|30960678|gb|AAP39124.1| UL40 [Human herpesvirus 1]
 gi|30960681|gb|AAP39126.1| UL40 [Human herpesvirus 1]
 gi|30960684|gb|AAP39128.1| UL40 [Human herpesvirus 1]
 gi|30960687|gb|AAP39130.1| UL40 [Human herpesvirus 1]
 gi|30960690|gb|AAP39132.1| UL40 [Human herpesvirus 1]
 gi|30960693|gb|AAP39134.1| UL40 [Human herpesvirus 1]
 gi|30960696|gb|AAP39136.1| UL40 [Human herpesvirus 1]
 gi|30960699|gb|AAP39138.1| UL40 [Human herpesvirus 1]
 gi|30960702|gb|AAP39140.1| UL40 [Human herpesvirus 1]
 gi|30960711|gb|AAP39146.1| UL40 [Human herpesvirus 1]
 gi|30960714|gb|AAP39148.1| UL40 [Human herpesvirus 1]
 gi|30960717|gb|AAP39150.1| UL40 [Human herpesvirus 1]
 gi|30960720|gb|AAP39152.1| UL40 [Human herpesvirus 1]
 gi|30960723|gb|AAP39154.1| UL40 [Human herpesvirus 1]
 gi|30960726|gb|AAP39156.1| UL40 [Human herpesvirus 1]
 gi|30960732|gb|AAP39160.1| UL40 [Human herpesvirus 1]
 gi|30960735|gb|AAP39162.1| UL40 [Human herpesvirus 1]
 gi|30960738|gb|AAP39164.1| UL40 [Human herpesvirus 1]
 gi|30960741|gb|AAP39166.1| UL40 [Human herpesvirus 1]
 gi|30960744|gb|AAP39168.1| UL40 [Human herpesvirus 1]
 gi|30960747|gb|AAP39170.1| UL40 [Human herpesvirus 1]
 gi|30960750|gb|AAP39172.1| UL40 [Human herpesvirus 1]
 gi|30960756|gb|AAP39176.1| UL40 [Human herpesvirus 1]
 gi|30960759|gb|AAP39178.1| UL40 [Human herpesvirus 1]
 gi|30960762|gb|AAP39180.1| UL40 [Human herpesvirus 1]
 gi|30960765|gb|AAP39182.1| UL40 [Human herpesvirus 1]
 gi|30960768|gb|AAP39184.1| UL40 [Human herpesvirus 1]
 gi|30960771|gb|AAP39186.1| UL40 [Human herpesvirus 1]
 gi|30960774|gb|AAP39188.1| UL40 [Human herpesvirus 1]
 gi|30960780|gb|AAP39192.1| UL40 [Human herpesvirus 1]
 gi|30960783|gb|AAP39194.1| UL40 [Human herpesvirus 1]
 gi|30960786|gb|AAP39196.1| UL40 [Human herpesvirus 1]
 gi|30960789|gb|AAP39198.1| UL40 [Human herpesvirus 1]
 gi|30960792|gb|AAP39200.1| UL40 [Human herpesvirus 1]
 gi|30960795|gb|AAP39202.1| UL40 [Human herpesvirus 1]
 gi|30960798|gb|AAP39204.1| UL40 [Human herpesvirus 1]
 gi|30960801|gb|AAP39206.1| UL40 [Human herpesvirus 1]
 gi|30960804|gb|AAP39208.1| UL40 [Human herpesvirus 1]
 gi|30960807|gb|AAP39210.1| UL40 [Human herpesvirus 1]
 gi|30960810|gb|AAP39212.1| UL40 [Human herpesvirus 1]
 gi|30960816|gb|AAP39216.1| UL40 [Human herpesvirus 1]
 gi|30960822|gb|AAP39220.1| UL40 [Human herpesvirus 1]
 gi|30960825|gb|AAP39222.1| UL40 [Human herpesvirus 1]
 gi|30960828|gb|AAP39224.1| UL40 [Human herpesvirus 1]
 gi|30960834|gb|AAP39228.1| UL40 [Human herpesvirus 1]
 gi|30960840|gb|AAP39232.1| UL40 [Human herpesvirus 1]
 gi|30960843|gb|AAP39234.1| UL40 [Human herpesvirus 1]
 gi|30960846|gb|AAP39236.1| UL40 [Human herpesvirus 1]
 gi|30960849|gb|AAP39238.1| UL40 [Human herpesvirus 1]
 gi|30960852|gb|AAP39240.1| UL40 [Human herpesvirus 1]
 gi|30960855|gb|AAP39242.1| UL40 [Human herpesvirus 1]
 gi|30960858|gb|AAP39244.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score = 88.9 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 7/119 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N           K    +   +  +A  +EI +     P     L+
Sbjct: 186 RDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241

Query: 62  APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
             +    E Y++F A+R    I ++PLF        +   ++   K  NFFE R T Y 
Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA 300


>gi|30960420|gb|AAP38952.1| UL40 [Human herpesvirus 1]
 gi|30960423|gb|AAP38954.1| UL40 [Human herpesvirus 1]
 gi|30960426|gb|AAP38956.1| UL40 [Human herpesvirus 1]
 gi|30960465|gb|AAP38982.1| UL40 [Human herpesvirus 1]
 gi|30960525|gb|AAP39022.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score = 88.9 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 7/119 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N           K    +   +  +A  +EI +     P     L+
Sbjct: 186 RDEAVHTTASCYIYNNYLSG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241

Query: 62  APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
             +    E Y++F A+R    I ++PLF        +   ++   K  NFFE R T Y 
Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA 300


>gi|30960429|gb|AAP38958.1| UL40 [Human herpesvirus 1]
 gi|30960468|gb|AAP38984.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score = 88.9 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 7/119 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N           K    +   +  +A  +EI +     P     L+
Sbjct: 186 RDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241

Query: 62  APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
             +    E Y++F A+R    I ++PLF        +   ++   K  NFFE R T Y 
Sbjct: 242 PAALVAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA 300


>gi|30960837|gb|AAP39230.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score = 88.9 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 7/119 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N           K    +   +  +A  +EI +     P     L+
Sbjct: 186 RDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241

Query: 62  APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
             +    E Y++F A+R    I ++PLF        +   ++   K  NFFE R T Y 
Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA 300


>gi|30960705|gb|AAP39142.1| UL40 [Human herpesvirus 1]
 gi|30960777|gb|AAP39190.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score = 88.9 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 7/119 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N           K    +   +  +A  +EI +     P     L+
Sbjct: 186 RDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241

Query: 62  APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
             +    E Y++F A+R    I ++PLF        +   ++   K  NFFE R T Y 
Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA 300


>gi|30960708|gb|AAP39144.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score = 88.9 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 7/119 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N           K    +   +  +A  +EI +     P     L+
Sbjct: 186 RDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241

Query: 62  APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
             +    E Y++F A+R    I ++PLF        +   ++   K  NFFE R T Y 
Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA 300


>gi|30960753|gb|AAP39174.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score = 88.9 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 7/119 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N           K    +   +  +A  +EI +     P     L+
Sbjct: 186 RDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241

Query: 62  APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
             +    E Y++F A+R    I ++PLF        +   ++   K  NFFE R T Y 
Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA 300


>gi|34419511|ref|NP_899524.1| aerobic ribonucleoside diphosphate reductase small subunit [Vibrio
           phage KVP40]
 gi|34333192|gb|AAQ64347.1| aerobic ribonucleoside diphosphate reductase small subunit [Vibrio
           phage KVP40]
          Length = 374

 Score = 88.9 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 5/105 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE LHL     +I+  +         E     Q ++  +  +    E  +AH    +G 
Sbjct: 235 RDEQLHLKGTQALISIWQNYKDDPEMAEISLRLQPEAEKIFMQVVDQEKEWAHSLFSQGT 294

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101
             GLNA    +Y++++A+ R   +GL   +   ++P PW+ + ++
Sbjct: 295 VPGLNAQILCEYVEYLADSRMRSVGLNSPYPRRKHPLPWIRKWLN 339


>gi|30960654|gb|AAP39108.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score = 88.9 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 7/119 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N           K    +   +  +A  +EI +     P     L+
Sbjct: 186 RDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241

Query: 62  APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
             +    E Y++F A+R    I ++PLF        +   ++   K  NFFE R T Y 
Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA 300


>gi|30960729|gb|AAP39158.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score = 88.9 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 7/119 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N           K    +   +  +A  +EI +     P     L+
Sbjct: 186 RDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241

Query: 62  APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
             +    E Y++F A+R    I ++PLF        +   ++   K  NFFE R T Y 
Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA 300


>gi|86140897|ref|ZP_01059456.1| ribonucleoside-diphosphate reductase, beta subunit 1
           [Leeuwenhoekiella blandensis MED217]
 gi|85832839|gb|EAQ51288.1| ribonucleoside-diphosphate reductase, beta subunit 1
           [Leeuwenhoekiella blandensis MED217]
          Length = 427

 Score = 88.9 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 4/122 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62
           E +H +FG+D+IN IK ENP  + +E     + M   +   E         KG +  L  
Sbjct: 298 EQIHGDFGVDIINIIKKENPEWFDEEHNNLIKEMCLNSFEAESKVVDWIFEKGELDFLPK 357

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQQG 119
               ++++   N+    IGLE LF   E       W  + I   K  +FF  R   Y + 
Sbjct: 358 AVINEFLKNRFNKSLEAIGLEKLFDIDEALLQETEWFDDEIIGTKHGDFFVKRSINYSKR 417

Query: 120 AE 121
            +
Sbjct: 418 TQ 419


>gi|255683173|ref|YP_003084381.1| UL40 [Duck enteritis virus]
 gi|158343199|gb|ABW35292.1| ribonucleotide reductase subunit 2 [Anatid herpesvirus 1]
 gi|208401182|gb|ACI26683.1| UL40 [Anatid herpesvirus 1]
 gi|254839988|gb|ACT83534.1| UL40 [Anatid herpesvirus 1]
          Length = 355

 Score = 88.9 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 5/123 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N+   +      K    +   +  EA  LE  +     P     ++
Sbjct: 237 RDETIHTKASCVIYNKHLQKYK----KPSTCRIYKLFSEAVKLECEFLRARAPSDSAIID 292

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             +   Y++F A+R    IGL PLF        +    +   ++ NFFE R T Y  G+ 
Sbjct: 293 TEAICSYVRFNADRLLSDIGLAPLFDEPPPKHDFPLAFMATSQQTNFFERRNTTYA-GSV 351

Query: 122 LKW 124
           L  
Sbjct: 352 LND 354


>gi|257373022|ref|YP_003175796.1| ribonucleotide reductase [Halomicrobium mukohataei DSM 12286]
 gi|257167746|gb|ACV49438.1| ribonucleotide reductase [Halomicrobium mukohataei DSM 12286]
          Length = 336

 Score = 88.6 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 4/122 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62
           E +H  FG++++  I+ ENP L+ ++F+++ +    +A   E+        +G +  L  
Sbjct: 207 EQIHGLFGVELVETIREENPDLFDEDFEEEVQAACQQAFEAEMKILDWIFGEGELEFLPR 266

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQG 119
              + +++   N+    +G+EP+F+  E+      W  E I + K+ +FF  R T Y + 
Sbjct: 267 AHVDAFLRDRFNQSLENVGVEPIFEPDEDLLEETRWFDEDIMMTKDNDFFSKRSTTYNKH 326

Query: 120 AE 121
           A+
Sbjct: 327 AQ 328


>gi|327198722|emb|CCA61423.1| unnamed protein product [Diadromus pulchellus ascovirus 4a]
          Length = 395

 Score = 88.2 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 17/133 (12%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKE-----------FQQKSRTMLHEATLLEIAYAHE 51
           DE+ H +  I +      EN                   +   + +  E   LE  + + 
Sbjct: 250 DETQHTDGMITLFKIFVDENTECRCNPILGCNCIRPDVLRDTVKKIALEMVRLEDEFINL 309

Query: 52  TMPKG-----FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKE 105
              +      F+ ++    +QY++FIAN+R   +  +  F + ++NP P    +I+    
Sbjct: 310 AYDEYADDEVFMNISKTKLKQYIRFIANKRMEAMRYDHPFPEASDNPLPEFEIMINAPIN 369

Query: 106 KNFFETRVTEYQQ 118
            NFFE R T+Y +
Sbjct: 370 TNFFENRSTDYAR 382


>gi|90407600|ref|ZP_01215781.1| ribonucleoside-diphosphate reductase beta chain [Psychromonas sp.
           CNPT3]
 gi|90311303|gb|EAS39407.1| ribonucleoside-diphosphate reductase beta chain [Psychromonas sp.
           CNPT3]
          Length = 424

 Score = 87.8 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 4/121 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62
           E LH NFGID+I  IK ENP  + +E+QQ  RT+  +A   E         +G +  +  
Sbjct: 295 EQLHGNFGIDLIQIIKQENPSWFNEEYQQSVRTLCLQAFKSESKIIDWIYAEGELDFIPK 354

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQQG 119
              +++++   N+    I +E +F+  E       W  + I   K  +FF  R   Y + 
Sbjct: 355 AQVKEFIKNRFNQSLQSIDIEKVFEIDEKLLEKTEWFDDEIIGTKHGDFFVKRSINYNKR 414

Query: 120 A 120
           +
Sbjct: 415 S 415


>gi|261868068|ref|YP_003255990.1| ribonucleoside-diphosphate reductase subunit beta [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|293389919|ref|ZP_06634253.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|261413400|gb|ACX82771.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|290950453|gb|EFE00572.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 329

 Score = 87.4 bits (216), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 4/119 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62
           E +H  FGI + + ++ E P L+T EF  + + +  +A   E A        G +  L+ 
Sbjct: 200 EEIHGRFGISLYHLLREEQPELFTDEFYAELKELAEQAFNAEKAILDWIFEDGELSFLSK 259

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQ 118
            + E Y+    N     +GLEP++  +        W    I   KE +FF  R T+Y +
Sbjct: 260 ATVENYIANRYNNSLVTLGLEPIYNISPAQLKETEWFDIEILSTKETDFFNKRSTDYSK 318


>gi|295134784|ref|YP_003585460.1| ribonucleotide reductase [Zunongwangia profunda SM-A87]
 gi|294982799|gb|ADF53264.1| ribonucleotide reductase [Zunongwangia profunda SM-A87]
          Length = 324

 Score = 87.0 bits (215), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 4/120 (3%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGLN 61
           DE +H N GI +INQI+ E P  + +E  +K   ++  +  +E          G    +N
Sbjct: 194 DEQIHANAGIYIINQIREEYPDYFNEEMTRKLTDVVTRSIEVEEEILDWIFENGQLENIN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQQ 118
             +   +M+F  +     IGL   +  T     P  W  E +      +FF  R  +Y +
Sbjct: 254 KKNLMDFMKFRLDDSLKSIGLPKQYNITAAEYQPMLWFEEEVFANSLDDFFARRPVDYTK 313


>gi|30960492|gb|AAP39000.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score = 87.0 bits (215), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 45/119 (37%), Gaps = 7/119 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      +             K    +   +  +A  +EI +     P     L+
Sbjct: 186 RDEAVHTTASCYIYTNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241

Query: 62  APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
             +    E Y++F A+R    I ++PLF        +   ++   K  NFFE R T Y 
Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA 300


>gi|82492124|gb|ABB77921.1| ribonucleotide reductase beta chain [Environmental halophage 1
           AAJ-2005]
          Length = 358

 Score = 86.6 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 4/122 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62
           E +H  FG +++  I+ ENP L+  +F  + +    +A   E       +  G +  L  
Sbjct: 229 EQIHGLFGQELVETIREENPDLFDDDFTDEIQDACQQAYEAESEILDWILEDGELDFLPR 288

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQG 119
              + +++   N+     G++P+F   E+      W  E I + KE +FF  R T Y + 
Sbjct: 289 EHIDAFLKDRFNQSLDNAGVDPVFDPDEDVVDETRWFDEDIMMTKENDFFSKRSTTYNKH 348

Query: 120 AE 121
            +
Sbjct: 349 TQ 350


>gi|13242410|ref|NP_077433.1| ribonucleotide reductase subunit 2 [Cercopithecine herpesvirus 9]
 gi|11036562|gb|AAG27191.1|AF275348_11 ribonucleotide reductase, small subunit [Cercopithecine herpesvirus
           9]
          Length = 311

 Score = 86.6 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 47/123 (38%), Gaps = 5/123 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H +    + N           K    +   +  EA  +E  +     PK    +N
Sbjct: 193 RDEAVHTSASCCIYNNYI----SYKEKPAIPRIHQLFMEAVNIECNFISAYAPKNQRIIN 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             +  QY+++ A+R    I +  LF        +    +  +K  NFFE   T Y  GA 
Sbjct: 249 IDAILQYVRYNADRLLSAINIPVLFNAPAPKADFPLAFMTAEKHTNFFERHSTAY-TGAV 307

Query: 122 LKW 124
           +  
Sbjct: 308 IND 310


>gi|149369595|ref|ZP_01889447.1| ribonucleoside-diphosphate reductase, beta subunit [unidentified
           eubacterium SCB49]
 gi|149357022|gb|EDM45577.1| ribonucleoside-diphosphate reductase, beta subunit [unidentified
           eubacterium SCB49]
          Length = 424

 Score = 86.6 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 4/122 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62
           E +H +FGID+I  +K E+P  +T E+ +  + +  +A   E+        +G +  L  
Sbjct: 295 EQIHGDFGIDLILILKDEHPEWFTPEYHENIKRLCLDAYEAEVDLVDWIFEEGELDFLPK 354

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQQG 119
               ++++   N+    IG+E +F   E       W  + I   K  +FF  R   Y + 
Sbjct: 355 TVINEFLKNRFNKSLESIGVEKVFDVDEALVIQTEWFDDEIIGTKHGDFFVKRSVNYSKR 414

Query: 120 AE 121
            +
Sbjct: 415 TQ 416


>gi|327198239|ref|YP_004306815.1| putative ribonucleotide reductase B subunit [Pseudomonas phage
           KPP10]
 gi|297591765|dbj|BAJ09185.1| putative ribonucleotide reductase B subunit [Pseudomonas phage
           KPP10]
          Length = 339

 Score = 86.2 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 2/124 (1%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GLN 61
           DE+ H+   I V+  ++ +          Q+ R ++ +    E+ Y      KG    L 
Sbjct: 202 DETDHVEKNIRVLKAMRKDLTPEENAILDQEIRYLIEDYREAEVKYLVLAFEKGPQHDLT 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                +Y+ ++   R  +  L    +  ENP PWM  +I+  +  NFFE +VT+Y   ++
Sbjct: 262 FEQTVEYIDYLCRLRLFECELLKEHQVGENPLPWMEWMINAARHDNFFEKKVTDYS-HSK 320

Query: 122 LKWD 125
           L  D
Sbjct: 321 LSGD 324


>gi|238695114|ref|YP_002922308.1| aerobic NDP reductase small subunit [Enterobacteria phage JSE]
 gi|220029250|gb|ACL78185.1| aerobic NDP reductase small subunit [Enterobacteria phage JSE]
          Length = 388

 Score = 86.2 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 47/111 (42%), Gaps = 5/111 (4%)

Query: 2   RDESLHLNFGIDVINQIK----IENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE LHL     +I Q +     +      +E + ++  +  +    E  +       G 
Sbjct: 248 RDEQLHLKGTQYIIRQWQTGVDGDEWKQIAEELEGEATKIFLDVVEQEKEWVDHLFAMGA 307

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107
              L+    + Y++++A+ R    GL+  F    +P PWM + ++  + +N
Sbjct: 308 IPNLSPEILKTYVEYLADSRMRAAGLKSPFSVRRHPLPWMRKWLNSDEVQN 358


>gi|157311531|ref|YP_001469574.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           Phi1]
 gi|149380735|gb|ABR24740.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           Phi1]
          Length = 386

 Score = 85.9 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 47/111 (42%), Gaps = 5/111 (4%)

Query: 2   RDESLHLNFGIDVINQIK----IENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE LHL     +I Q +     +      +E + ++  +  +    E  +       G 
Sbjct: 246 RDEQLHLKGTQYIIRQWQTGADGDEWKQIAEELEGEATKIFLDVVEQEKEWVDHLFAMGA 305

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107
              L+    + Y++++A+ R    GL+  F    +P PWM + ++  + +N
Sbjct: 306 IPNLSPEILKTYVEYLADSRMRAAGLKSPFSVRRHPLPWMRKWLNSDEVQN 356


>gi|33620698|ref|NP_891801.1| aerobic NDP reductase small subunit [Enterobacteria phage RB49]
 gi|33438568|gb|AAL15125.2| aerobic NDP reductase small subunit [Enterobacteria phage RB49]
          Length = 386

 Score = 85.9 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 47/111 (42%), Gaps = 5/111 (4%)

Query: 2   RDESLHLNFGIDVINQIK----IENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE LHL     +I Q +     +      +E + ++  +  +    E  +       G 
Sbjct: 246 RDEQLHLKGTQYIIRQWQTGVDGDEWKQIAEELEGEATKIFLDVVEQEKEWVDHLFAMGA 305

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107
              L+    + Y++++A+ R    GL+  F    +P PWM + ++  + +N
Sbjct: 306 IPNLSPEILKTYVEYLADSRMRAAGLKSPFSVRRHPLPWMRKWLNSDEVQN 356


>gi|76803441|ref|YP_327710.1| ribonucleoside-diphosphate reductase, beta subunit 1 [Natronomonas
           pharaonis DSM 2160]
 gi|76559256|emb|CAI50863.1| ribonucleoside-diphosphate reductase, beta subunit 1 [Natronomonas
           pharaonis DSM 2160]
          Length = 336

 Score = 85.9 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 60/122 (49%), Gaps = 4/122 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62
           E +H  FG++++  I+ ENP L+ ++F+++ +     A   E+        +G +  L  
Sbjct: 207 EQIHGLFGVELVETIREENPDLFDEDFEEEVQAACQRAFEAEMKILDWIFGEGELEFLPR 266

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQG 119
              + +++   N+    +G+EP+F+  +       W  E I + K+ +FF  R T Y + 
Sbjct: 267 THVDAFLRDRFNQSLENVGVEPIFEPDDGLLEETRWFDEDIMMTKDNDFFSKRSTTYNKH 326

Query: 120 AE 121
           A+
Sbjct: 327 AQ 328


>gi|323145837|gb|ADX32078.1| hypothetical protein [Pseudomonas phage P3_CHA]
 gi|323146023|gb|ADX32263.1| hypothetical protein [Pseudomonas phage PAK_P3]
          Length = 344

 Score = 85.9 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 2/124 (1%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GLN 61
           DE+ H+   I V+  ++ +          Q+ R ++ +    E+ Y      KG    L 
Sbjct: 207 DETDHVEKNIRVLKAMRKDLTPEENSILDQEIRYLIEDYREAEVKYLVLAFEKGPQHDLT 266

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                +Y+ ++   R  +  L    +  ENP PWM  +I+  +  NFFE +VT+Y   ++
Sbjct: 267 FEQTVEYIDYLCRLRLFECELLKEHQVGENPLPWMEWMINAARHDNFFEKKVTDYS-HSK 325

Query: 122 LKWD 125
           L  D
Sbjct: 326 LSGD 329


>gi|117530173|ref|YP_851016.1| ribonucleoside-diphosphate reductase beta subunit [Microcystis
           phage Ma-LMM01]
 gi|86990305|dbj|BAE79256.1| ribonucleoside-diphosphate reductase beta subunit [Microcystis
           phage Ma-LMM01]
 gi|117165785|dbj|BAF36093.1| ribonucleoside-diphosphate reductase beta subunit [Microcystis
           phage Ma-LMM01]
 gi|124270949|dbj|BAF45776.1| ribonucleoside-diphosphate reductase beta subunit [Cyanophage
           Ma-LMM02]
 gi|124270951|dbj|BAF45777.1| ribonucleoside-diphosphate reductase beta subunit [Cyanophage
           Ma-LMM03]
 gi|124270953|dbj|BAF45778.1| ribonucleoside-diphosphate reductase beta subunit [Cyanophage
           Ma-HPM05]
          Length = 348

 Score = 85.9 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 15/134 (11%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I     E   +W      +   +  +A   EI +    +  G  G+N
Sbjct: 218 RDEQTHLKLISNIIRTGLAEGTLMWD---TDEIIDLFRKAAEYEIEWGLH-IGLGVNGIN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKE-----KNFFETRV 113
           A + EQY +++ N R   IGL  +F+   Y+ NP+  +        E      NFFE+ V
Sbjct: 274 ATTIEQYAKYLCNIRARAIGLPTVFEGRQYSRNPYAHLERFAATTGEDSITRDNFFESGV 333

Query: 114 TEYQQGAEL--KWD 125
             Y+  A++   WD
Sbjct: 334 I-YRNPAKVVDGWD 346


>gi|190896442|gb|ACE96734.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896490|gb|ACE96758.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 213

 Score = 85.5 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 7/69 (10%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ EA  +E  +  +++P   VG+N
Sbjct: 152 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKEAVEIEREFVVDSLPCALVGMN 204

Query: 62  APSCEQYMQ 70
                QY++
Sbjct: 205 GELMSQYIE 213


>gi|190896432|gb|ACE96729.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896434|gb|ACE96730.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896436|gb|ACE96731.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896438|gb|ACE96732.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896440|gb|ACE96733.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896444|gb|ACE96735.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896446|gb|ACE96736.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896448|gb|ACE96737.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896450|gb|ACE96738.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896452|gb|ACE96739.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896454|gb|ACE96740.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896456|gb|ACE96741.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896458|gb|ACE96742.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896460|gb|ACE96743.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896462|gb|ACE96744.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896464|gb|ACE96745.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896466|gb|ACE96746.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896468|gb|ACE96747.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896470|gb|ACE96748.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896472|gb|ACE96749.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896474|gb|ACE96750.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896476|gb|ACE96751.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896478|gb|ACE96752.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896482|gb|ACE96754.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896484|gb|ACE96755.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896486|gb|ACE96756.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896488|gb|ACE96757.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896492|gb|ACE96759.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896494|gb|ACE96760.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896496|gb|ACE96761.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896498|gb|ACE96762.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896500|gb|ACE96763.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896502|gb|ACE96764.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896504|gb|ACE96765.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896506|gb|ACE96766.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 213

 Score = 85.5 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 7/69 (10%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ EA  +E  +  +++P   VG+N
Sbjct: 152 RDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKEAVEIEREFVVDSLPCALVGMN 204

Query: 62  APSCEQYMQ 70
                QY++
Sbjct: 205 GELMSQYIE 213


>gi|190896480|gb|ACE96753.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 213

 Score = 84.3 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 7/69 (10%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ EA  +E  +  +++P   VG+N
Sbjct: 152 RDEGLHCDFACLLYSLLRK-------KLGEERVKGIVKEAVEIEREFVVDSLPCALVGMN 204

Query: 62  APSCEQYMQ 70
                QY++
Sbjct: 205 GELMSQYIE 213


>gi|121730673|ref|ZP_01682814.1| ATP-dependent Zn proteases [Vibrio cholerae V52]
 gi|121627739|gb|EAX60372.1| ATP-dependent Zn proteases [Vibrio cholerae V52]
          Length = 129

 Score = 84.3 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 6/94 (6%)

Query: 14  VINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGLNAPSCEQY 68
           ++N ++            +E +Q+S  +  EA   E  +A      G  +GLN     QY
Sbjct: 1   MLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAEYLFKDGSMIGLNKDILCQY 60

Query: 69  MQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID 101
           +++I N R   +GLEP +     NP PW++  + 
Sbjct: 61  VEYITNIRMQAVGLEPAYPAATNNPIPWINAWLS 94


>gi|167957419|ref|ZP_02544493.1| ribonucleotide-diphosphate reductase subunit beta [candidate
           division TM7 single-cell isolate TM7c]
          Length = 277

 Score = 84.3 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 29/66 (43%), Positives = 40/66 (60%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+LHL FGI+++  I  ENP L   EF  + R ++ +A  LE AY  + +P G +GLN
Sbjct: 212 RDENLHLEFGINLLLTILHENPDLQDPEFADEIRNLILQAVELEEAYNRDMLPNGILGLN 271

Query: 62  APSCEQ 67
           A    Q
Sbjct: 272 ADYVNQ 277


>gi|294338336|emb|CBJ94375.1| Probable ribonucleotide reductase (small subunit) [Campylobacter
           phage CPt10]
          Length = 369

 Score = 84.3 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 5/108 (4%)

Query: 2   RDESLHLNFGIDVINQIK---IENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           RDE+LHL    ++I  +     E         +        EA   E  +      KG F
Sbjct: 226 RDENLHLAITQNLIKILSRSPEEGFINAWNSIKDNITDRYLEAADQEFKWIDYLFSKGAF 285

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK 104
           +G+     + Y++++ N+R   IG + +F  + +NP PW+   I+  K
Sbjct: 286 LGMTPELAKNYIKYLINKRLKAIGFKEVFAGFNKNPIPWVETYINYDK 333


>gi|294338139|emb|CBJ93977.1| Probable ribonucleotide reductase (small subunit) [Campylobacter
           phage CP220]
          Length = 369

 Score = 83.9 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 5/108 (4%)

Query: 2   RDESLHLNFGIDVINQIK---IENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           RDE+LHL    ++I  +     E         +        EA   E  +      KG F
Sbjct: 226 RDENLHLAITQNLIKILSRSPEEGFINAWNSIKDNITDRYLEAADQEFKWIDYLFSKGAF 285

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK 104
           +G+     + Y++++ N+R   IG + +F  + +NP PW+   I+  K
Sbjct: 286 LGMTPELAKNYIKYLINKRLKAIGFKEVFAGFNKNPIPWVETYINYDK 333


>gi|148688625|gb|EDL20572.1| mCG1032193 [Mus musculus]
          Length = 150

 Score = 83.9 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 7/68 (10%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G++
Sbjct: 65  RDEGLHWDFACLMFK-------HLAHKPSEQRVKEIITTAVRIEQEFLTEALPVKLIGMS 117

Query: 62  APSCEQYM 69
               +QY+
Sbjct: 118 CTLMKQYI 125


>gi|251792578|ref|YP_003007304.1| ribonucleoside-diphosphate reductase subunit beta [Aggregatibacter
           aphrophilus NJ8700]
 gi|247533971|gb|ACS97217.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           aphrophilus NJ8700]
          Length = 329

 Score = 83.5 bits (206), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 4/119 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62
           E +H  FGI + + ++ E P L+T  F  + + +  +A   E    +     G +  L+ 
Sbjct: 200 EEIHGRFGITLYSILREEQPELFTDAFFTELKELADQAFTAEKEILNWIFEDGELDFLSK 259

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQ 118
            + E Y+    N     +GLEP +           W    I   KE +FF  R T+Y +
Sbjct: 260 ATVENYIANRYNNSLQALGLEPAYNINPEQLKETEWFDIEILSTKETDFFNKRSTDYSK 318


>gi|295698298|ref|YP_003602953.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus
           Riesia pediculicola USDA]
 gi|291156973|gb|ADD79418.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus
           Riesia pediculicola USDA]
          Length = 375

 Score = 83.5 bits (206), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 6/121 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LH+     +IN ++   E+  +   +KE     + +    +  E  +A      G 
Sbjct: 236 RDEALHVTGTQHMINIMQSSKEDKEMIEISKECLMICQKIFLNVSDQEKRWADYLFSNGN 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
            +GLN    ++Y+ +I   R   IGL+       NP PW++  +     ++   ET V+ 
Sbjct: 296 LIGLNKKILKEYIDYITEVRMRAIGLKKDLIKKINPIPWINAWLSSDNIQSAPQETEVSS 355

Query: 116 Y 116
           Y
Sbjct: 356 Y 356


>gi|168702485|ref|ZP_02734762.1| ribonucleotide-diphosphate reductase small chain [Gemmata
           obscuriglobus UQM 2246]
          Length = 70

 Score = 83.5 bits (206), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 2/63 (3%)

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
             GL+      Y ++ A+RR   +G+ P+F  T+NPF +M  + D+++  NFFE RV+ Y
Sbjct: 1   MAGLSCRDLRSYPEYAADRRLESLGIAPVF-GTKNPFGFMD-LQDVQELTNFFERRVSAY 58

Query: 117 QQG 119
           Q G
Sbjct: 59  QLG 61


>gi|256422447|ref|YP_003123100.1| ribonucleotide reductase [Chitinophaga pinensis DSM 2588]
 gi|256037355|gb|ACU60899.1| ribonucleotide reductase [Chitinophaga pinensis DSM 2588]
          Length = 324

 Score = 83.2 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 4/120 (3%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGLN 61
           DE +H N GI +IN+I+ E P ++ +    +   ++ E+  +E         +G    ++
Sbjct: 194 DEQIHANAGIYLINKIREEYPEMFDEATITRVSNLVKESIEVESNILDWIFSEGKIDTVS 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                 +M++ A+    +I L  LF  +     P  W  E +      +FF  R  +Y +
Sbjct: 254 KEHLVNFMKYRADDSLKKINLPALFNISTEDNKPMLWFEEEVFANSLDDFFAKRPVDYTK 313


>gi|330004285|ref|ZP_08304843.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
 gi|328536657|gb|EGF62979.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
          Length = 380

 Score = 83.2 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 6/105 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LH      ++  ++     L  K+  ++        + +    E+ +A      G 
Sbjct: 239 RDEALHCEGTERMLRNMRNGREGLLWKQIAEEEEPFVYQTMLDVAEQEMRWADYLFKDGS 298

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVI 100
            +GLNA   +QY+++  N    ++ L PLF     +P PWM+  +
Sbjct: 299 MIGLNAKILKQYVKYRTNLAMKRLHLNPLFDDVTFDPLPWMNSWL 343


>gi|57790965|ref|YP_182369.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 1]
 gi|5918981|gb|AAD56212.1|AF168792_13 ribonucleotide reductase small subunit [Gallid herpesvirus 1]
          Length = 310

 Score = 82.8 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 48/116 (41%), Gaps = 4/116 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N    ++     K   ++   +  EA  +E  +     P+    ++
Sbjct: 192 RDEAVHTTASCRIYNNWLGDHK----KPSAKRIHQLFKEAIEIECNFLASRAPQASRLID 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
             + + ++++  +R    IG+  +F        +   ++ + K  NFFE R T Y 
Sbjct: 248 LEAIQSFVRYSGDRLLTAIGVPTIFDEPPPDPSFPLTLMSIDKNVNFFEHRSTAYN 303


>gi|329738368|gb|AEB97332.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 1]
          Length = 310

 Score = 82.8 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 48/116 (41%), Gaps = 4/116 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H      + N    ++     K   ++   +  EA  +E  +     P+    ++
Sbjct: 192 RDEAVHTTASCRIYNNWLGDHK----KPSAKRIHQLFKEAIEIECNFLASRAPQASRLID 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
             + + ++++  +R    IG+  +F        +   ++ + K  NFFE R T Y 
Sbjct: 248 LEAIQSFVRYSGDRLLTAIGVPTIFDEPPPDPSFPLTLMSIDKNVNFFEHRSTAYN 303


>gi|319957101|ref|YP_004168364.1| ribonucleoside-diphosphate reductase [Nitratifractor salsuginis DSM
           16511]
 gi|319419505|gb|ADV46615.1| Ribonucleoside-diphosphate reductase [Nitratifractor salsuginis DSM
           16511]
          Length = 337

 Score = 82.4 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 7/124 (5%)

Query: 2   RDE-SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
           RDE + HL    ++   I  EN          K+  M+ EA  +E+ Y    +     +G
Sbjct: 210 RDEINTHLPLFANIFKTIYKENKIP--ASIVDKAYEMIQEAVDIELEYGKYLLENYPIMG 267

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF--PWMSEVIDLKKE-KNFFETRVTEY 116
           L     E+ +   AN R ++IGLEP+F+ T   +    + + + +     NFFE+ V  Y
Sbjct: 268 LTDELMEKTVYNYANDRLNKIGLEPIFEETPQTYLQKLVEKHLKMNDVRSNFFESNVANY 327

Query: 117 QQGA 120
            + +
Sbjct: 328 AKNS 331


>gi|152991848|ref|YP_001357569.1| ribonucleoside-diphosphate reductase, beta subunit [Sulfurovum sp.
           NBC37-1]
 gi|151423709|dbj|BAF71212.1| ribonucleoside-diphosphate reductase, beta subunit [Sulfurovum sp.
           NBC37-1]
          Length = 337

 Score = 82.4 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 7/124 (5%)

Query: 2   RDE-SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
           RDE + HL    ++   I+ EN    +      +  M+ +A  +E+ Y H  + +   +G
Sbjct: 210 RDELNTHLPLFANIFKTIQKENNIATS--TIDAAYKMIQDAVKIELEYGHYLLDQFPIMG 267

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF--PWMSEVIDLKK-EKNFFETRVTEY 116
           +     EQ +   AN R  +IGL+P+F  +   +    +++ +++ + + NFFE+ V+ Y
Sbjct: 268 VTHELMEQTVYNYANDRLKKIGLDPIFDESATTYLQKLVTKHLEMNEVKSNFFESNVSNY 327

Query: 117 QQGA 120
            + +
Sbjct: 328 AKSS 331


>gi|90018206|gb|ABD83916.1| ribonucleotide reductase M2 polypeptide [Ictalurus punctatus]
          Length = 139

 Score = 82.0 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 7/66 (10%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +   ++++  A  +E  +  + +P   +G+N
Sbjct: 81  RDEGLHCDFACLMFK-------HLVNKPSEATVKSIIVNAVQIEQEFLTQALPVKLIGMN 133

Query: 62  APSCEQ 67
               +Q
Sbjct: 134 CDLMKQ 139


>gi|46143780|ref|ZP_00134247.2| COG0208: Ribonucleotide reductase, beta subunit [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 336

 Score = 81.6 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 5/90 (5%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE LHL    +++N I    ++P +    +E +Q++  +   A   E  +A      G 
Sbjct: 237 RDEYLHLTGTQNMLNIIASGQDDPEMAEIAEECKQEAYDLFVAAAEQEKEWAAYLFKDGS 296

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF 86
            +GLN     +Y+++I N R   +GL   F
Sbjct: 297 MIGLNEDILVKYVEYITNIRMQAVGLPRPF 326


>gi|319954718|ref|YP_004165985.1| ATP-cone domain protein [Cellulophaga algicola DSM 14237]
 gi|319423378|gb|ADV50487.1| ATP-cone domain protein [Cellulophaga algicola DSM 14237]
          Length = 424

 Score = 81.6 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 4/122 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62
           E +H +FGID+I  IK ENP  +  ++ +  + M  +A + E +       KG +  L  
Sbjct: 295 EQIHGDFGIDIIKIIKKENPDWFDADYHKTIQQMCKDAFIAESSVVDWIFEKGELDFLPK 354

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQQG 119
               ++++   N     IG+E +F+  E       W  + I   K  +FF  R   Y + 
Sbjct: 355 DVVNEFIKNRFNNSLESIGIEKIFEVNEELIAETEWFDDEIIGTKHGDFFVKRSINYSKR 414

Query: 120 AE 121
            +
Sbjct: 415 TQ 416


>gi|307244959|ref|ZP_07527056.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|306854124|gb|EFM86332.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
          Length = 325

 Score = 80.8 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 4/119 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62
           E +H  FGI +   ++ E+  L+T EF +  +T+  +A   E         +G +  ++ 
Sbjct: 196 EEIHGKFGIVLYEILREEHSELFTPEFFEDLKTLSSQAFEAECGILDWIFEEGDLSFISR 255

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQ 118
              E Y++   N     +GLEP +           W    I   KE +FF  R T+Y +
Sbjct: 256 EEVENYIRSRYNNSLMTLGLEPPYDVNPELLKETEWFDIEILSTKETDFFNKRSTDYSK 314


>gi|53728876|ref|ZP_00348266.1| COG0208: Ribonucleotide reductase, beta subunit [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126207635|ref|YP_001052860.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           pleuropneumoniae L20]
 gi|165975603|ref|YP_001651196.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|190149418|ref|YP_001967943.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|303249851|ref|ZP_07336055.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|303251971|ref|ZP_07338142.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307247133|ref|ZP_07529185.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
 gi|307249355|ref|ZP_07531349.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 4 str. M62]
 gi|307251676|ref|ZP_07533581.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|307253912|ref|ZP_07535764.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|307256172|ref|ZP_07537959.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 10 str. D13039]
 gi|307258366|ref|ZP_07540107.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 11 str. 56153]
 gi|307260605|ref|ZP_07542297.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
 gi|307262736|ref|ZP_07544363.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 13 str. N273]
 gi|126096427|gb|ABN73255.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|165875704|gb|ABY68752.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|189914549|gb|ACE60801.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302649401|gb|EFL79586.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|302651418|gb|EFL81570.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306856382|gb|EFM88533.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
 gi|306858649|gb|EFM90711.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 4 str. M62]
 gi|306860873|gb|EFM92881.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|306863116|gb|EFM95058.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|306865353|gb|EFM97249.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 10 str. D13039]
 gi|306867550|gb|EFM99397.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 11 str. 56153]
 gi|306869682|gb|EFN01467.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
 gi|306871881|gb|EFN03598.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 13 str. N273]
          Length = 325

 Score = 80.8 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 4/119 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62
           E +H  FGI +   ++ E+  L+T EF +  +T+  +A   E         +G +  ++ 
Sbjct: 196 EEIHGKFGIALYEILREEHSELFTPEFFEDLKTLSSQAFEAECGILDWIFEEGDLSFISR 255

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQ 118
              E Y++   N     +GLEP +           W    I   KE +FF  R T+Y +
Sbjct: 256 EEVENYIRSRYNNSLMTLGLEPPYDVNPELLKETEWFDIEILSTKETDFFNKRSTDYSK 314


>gi|294661479|ref|YP_003579932.1| NrdB ribonucleotide reductase B subunit [Klebsiella phage KP15]
 gi|292660640|gb|ADE34888.1| NrdB ribonucleotide reductase B subunit [Klebsiella phage KP15]
          Length = 402

 Score = 80.5 bits (198), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LH       I   Q+  ++P +   ++  ++++  +  E    E  +A      G 
Sbjct: 260 RDEALHQKGTQSKIRLWQMGKDDPEMVEISRRLKKEATAIFLEVYEQEKEWAEHLFSVGD 319

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
             G++  S   Y++ + ++R   +GL+  F    NP+PWM++ +
Sbjct: 320 VEGVSLKSTIAYIEHLTDQRMRAVGLDSPFTPIPNPYPWMNKWL 363


>gi|322515075|ref|ZP_08068083.1| ribonucleoside-diphosphate reductase beta subunit [Actinobacillus
           ureae ATCC 25976]
 gi|322118955|gb|EFX91132.1| ribonucleoside-diphosphate reductase beta subunit [Actinobacillus
           ureae ATCC 25976]
          Length = 326

 Score = 80.5 bits (198), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 4/119 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62
           E +H  FGI +   ++ E+  L+T EF ++ +T+  +A   E         +G +  ++ 
Sbjct: 197 EEIHGKFGIALYEILRDEHSELFTPEFFEELKTLSTQAFEAECGILDWIFEEGDLSFISR 256

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQ 118
            + E Y++   N     +GLEP +           W    I   KE +FF  R T+Y +
Sbjct: 257 EAVENYIRSRYNNSLMTLGLEPPYDVNPELLKETEWFDIEILSTKETDFFNKRSTDYSK 315


>gi|255535950|ref|YP_003096321.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Flavobacteriaceae bacterium 3519-10]
 gi|255342146|gb|ACU08259.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Flavobacteriaceae bacterium 3519-10]
          Length = 324

 Score = 80.5 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 4/120 (3%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGLN 61
           DE +H N GI +IN+I+ E P L T    +   T++  +  LE          G    ++
Sbjct: 194 DEQIHANAGIYLINKIREEQPDLLTDSDIEDIYTLVDHSIELEAEILDWIFEMGEIDNVS 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQQ 118
             +   +M++  +    +IG++  +  + +   P  W  E +      +FF  R  +Y +
Sbjct: 254 KENLLNFMKYRVDDSLKKIGMQTRYNVSGDEYRPMVWFEEEVFANSMDDFFAKRPVDYTK 313


>gi|293411957|ref|ZP_06654682.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
 gi|309797907|ref|ZP_07692288.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 145-7]
 gi|220980068|emb|CAP72260.1| Ribonucleoside-diphosphate reductase subunit beta [Escherichia coli
           LF82]
 gi|291469512|gb|EFF12001.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
 gi|308118515|gb|EFO55777.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 145-7]
 gi|323934216|gb|EGB30640.1| ribonucleotide reductase [Escherichia coli E1520]
          Length = 380

 Score = 80.1 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 6/105 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LH      +I  ++     L  KE            +      E+ +A      G 
Sbjct: 239 RDEALHCEGTERMIRFMRTGREGLLWKEIAADEENVIYDTMKSVAEQEMNWADYLFKDGS 298

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVI 100
            +GLNA   + Y+++  N   +++GL+ LF + T +P  WM++ +
Sbjct: 299 MIGLNADILKTYVKYRTNLAMNRLGLKALFPEVTTDPLVWMNKWL 343


>gi|325955614|ref|YP_004239274.1| ribonucleotide reductase [Weeksella virosa DSM 16922]
 gi|323438232|gb|ADX68696.1| ribonucleotide reductase [Weeksella virosa DSM 16922]
          Length = 324

 Score = 79.7 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 52/120 (43%), Gaps = 4/120 (3%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGLN 61
           DE +H N GI ++N+IK E P  +++E  Q+ + ++  +  +E         +G    + 
Sbjct: 194 DEQIHANAGIYIVNKIKEEFPDFFSEETIQEIKNVVTHSIEVESQILDWIFEQGEIETIK 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                 +M++  +    +IG   ++  T     P  W  E +      +FF  R  +Y +
Sbjct: 254 KKDLLNFMKYRVDESMLKIGFGKIYNITAEQYQPMVWFEEEVFANSLDDFFAKRPVDYTK 313


>gi|156847976|ref|XP_001646871.1| hypothetical protein Kpol_2002p84 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117552|gb|EDO19013.1| hypothetical protein Kpol_2002p84 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 351

 Score = 78.9 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 9/121 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RD  LH++F   +         HL  +   +  + ++ +A  +E     + +P   V L
Sbjct: 220 LRDRGLHVDFCCLMY-------AHLKNQIDSEIVQKIIVDAVEIEKKSLLKALPIIKVNL 272

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                 Q+++++A+      G E  +  T NP+ +M E + L    N     + + Q+ +
Sbjct: 273 KIDEMNQFIEYVADSILVAFGNEKHYNAT-NPYEFM-ENVVLPGNTNSLAKTIADAQKAS 330

Query: 121 E 121
           E
Sbjct: 331 E 331


>gi|9629834|ref|NP_045318.1| ribonucleotide reductase subunit 2 [Bovine herpesvirus 1]
 gi|266916|sp|Q01319|RIR2_BHV1C RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|330772|gb|AAA46063.1| ribonucleotide reductase small subunit [Bovine herpesvirus 1]
 gi|995642|emb|CAA90928.1| UL40 [Bovine herpesvirus 1]
 gi|1149578|emb|CAA88899.1| UL40 [Bovine herpesvirus 1]
 gi|2653307|emb|CAA06093.1| ribonucleotide reductase small subunit [Bovine herpesvirus type
           1.1]
          Length = 314

 Score = 78.9 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 46/127 (36%), Gaps = 15/127 (11%)

Query: 2   RDESLHLNFGIDVI-NQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG- 59
           RDE++H      +  N +  E P         +   +  EA       +         G 
Sbjct: 198 RDEAVHTAASCCIFDNYLGGERP------PPARIYELFREA----WKLSASLFGCAPRGS 247

Query: 60  --LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
             L+  +   Y+++ A+R    I L PLF        +   ++  +K  NFFE R T Y 
Sbjct: 248 HILDVEAISAYVEYSADRLLAAIQLPPLFGTPPPGTDFPLALMTAEKHTNFFERRSTNY- 306

Query: 118 QGAELKW 124
            G  +  
Sbjct: 307 TGTVIND 313


>gi|304373620|ref|YP_003858365.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB16]
 gi|299829576|gb|ADJ55369.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB16]
          Length = 391

 Score = 78.5 bits (193), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHLWTKEFQ--QKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LH       I   Q+  ++P +    FQ  +++  +  E    E  +A      G 
Sbjct: 249 RDEALHQKGTQSKIRLWQMGKDDPEMAEIAFQYEEEATQIFLEVYEQEKEWAEHLFSIGD 308

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
             G++  S   Y++ + ++R   +GL+  FK + NP+PWM++ +
Sbjct: 309 VDGVSLKSTIAYIEHLTDQRMRAVGLQSPFKPSPNPYPWMNKWL 352


>gi|312130784|ref|YP_003998124.1| ribonucleotide reductase [Leadbetterella byssophila DSM 17132]
 gi|311907330|gb|ADQ17771.1| ribonucleotide reductase [Leadbetterella byssophila DSM 17132]
          Length = 324

 Score = 78.5 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 4/120 (3%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LN 61
           DE +H N GI ++N I+ E P  +  E   +    + E+  +E         +G +  + 
Sbjct: 194 DEQIHANGGIYIVNTIRDEFPDFFDPETITQIEDTVRESIEVEERILDWIFSEGEIEIIK 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                 +M+F  +    +IG  PLF  +     P  W  E +      +FF  R  +Y +
Sbjct: 254 KKDLLNFMKFRIDDSMKKIGFSPLFHVSSADYQPIAWFEEEVFANSLDDFFAKRPVDYTK 313


>gi|66391516|ref|YP_239041.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB43]
 gi|62288604|gb|AAX78587.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB43]
          Length = 391

 Score = 78.5 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 5/104 (4%)

Query: 2   RDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LH       I   Q+  ++P +     ++++++  +  E    E  +A      G 
Sbjct: 249 RDEALHQKGTQSKIRLWQMGKDDPEMAEIAYQYEEEATQIFLEVYEQEKEWAEHLFSIGD 308

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
             G+   S   Y++ + ++R   +GL+  FK + NP+PWM++ +
Sbjct: 309 VDGVTLKSTIAYIEHLTDQRMRAVGLQSPFKPSPNPYPWMNKWL 352


>gi|167856024|ref|ZP_02478769.1| ribonucleotide-diphosphate reductase subunit alpha [Haemophilus
           parasuis 29755]
 gi|219871494|ref|YP_002475869.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           parasuis SH0165]
 gi|167852863|gb|EDS24132.1| ribonucleotide-diphosphate reductase subunit alpha [Haemophilus
           parasuis 29755]
 gi|219691698|gb|ACL32921.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           parasuis SH0165]
          Length = 325

 Score = 78.2 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 4/119 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62
           E +H  FGI +   +  E+  L+T EF ++ +T+  +A   E         +G +  ++ 
Sbjct: 196 EEIHGRFGIALYEILSDEHSELFTPEFFEELKTLSQQAFEAERGILDWIFEEGDLSFISR 255

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQ 118
            + E Y+    N     +GLEP +           W    I   KE +FF  R T+Y +
Sbjct: 256 KTVENYIMNRYNNSLSILGLEPPYDVDPELLKETEWFDIEIISTKETDFFNKRSTDYSK 314


>gi|45478633|ref|NP_995489.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           biovar Microtus str. 91001]
 gi|52788092|ref|YP_093920.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis]
 gi|145597234|ref|YP_001154698.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Pestoides F]
 gi|162417832|ref|YP_001604568.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Angola]
 gi|229896974|ref|ZP_04512133.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Yersinia pestis Pestoides A]
 gi|45357286|gb|AAS58680.1| putative ribonucleoside-diphosphate reductase beta subunit
           [Yersinia pestis biovar Microtus str. 91001]
 gi|52538021|emb|CAG27446.1| putative ribonucleoside-diphosphate reductase beta subunit
           [Yersinia pestis]
 gi|145213002|gb|ABP42407.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Yersinia pestis Pestoides F]
 gi|162350804|gb|ABX84753.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           Angola]
 gi|229700010|gb|EEO88050.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Yersinia pestis Pestoides A]
          Length = 380

 Score = 78.2 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 6/105 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTK----EFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LH      +I  ++     L  K    E +      + +    E+ +A      G 
Sbjct: 239 RDEALHCEGTERMIRFMRTGREGLMWKMIAAEEESFIYQTMMDVAGQEMRWADYLFKDGS 298

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVI 100
            +GLNA   + Y+++  N    ++GL PLF +  ++P  WM++ +
Sbjct: 299 MIGLNADILKSYVKYRTNLAMRRLGLRPLFPEIKDDPLVWMNKWL 343


>gi|326336655|ref|ZP_08202823.1| ribonucleoside-diphosphate reductase [Capnocytophaga sp. oral taxon
           338 str. F0234]
 gi|325691125|gb|EGD33096.1| ribonucleoside-diphosphate reductase [Capnocytophaga sp. oral taxon
           338 str. F0234]
          Length = 319

 Score = 77.8 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 5/120 (4%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LN 61
           DE +H N GI ++  I  ENP   TK  ++++   + E  LLE         +G +    
Sbjct: 190 DEQVHANAGIYILKTIFEENPEFRTKA-KEEATQFIREYILLEDKMLDWIFEEGELDFFT 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                 YM++  +    Q+ L   F  T     P  W  E + + +  +FF  R T Y +
Sbjct: 249 KKDLANYMRYRLDDALTQLDLGKPFGITAEEAKPMLWFEEEVFVNELDDFFAKRPTAYTK 308


>gi|327409820|ref|YP_004347240.1| ribonucleoside-diphosphate reductase small chain [Lausannevirus]
 gi|326784994|gb|AEA07128.1| ribonucleoside-diphosphate reductase small chain [Lausannevirus]
          Length = 319

 Score = 77.8 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 56/123 (45%), Gaps = 3/123 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+LH  F   + N   ++   ++ +  Q++   +L  A      +   ++    V ++
Sbjct: 191 RDEALHKKFAEVLYN-FLVDELKVFERVSQERCHEILTSAIEAVTDFIKYSLRLDNVNID 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A     YM+   +     +  E ++   EN   +M  +I L+ + NFFE  +T+Y +G +
Sbjct: 250 ADRMLGYMKRAVDDLATGLKYEKVYN-AENTLDYML-LIGLENKGNFFEGVITDYSKGMD 307

Query: 122 LKW 124
           +  
Sbjct: 308 MGD 310


>gi|257464834|ref|ZP_05629205.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           minor 202]
 gi|257450494|gb|EEV24537.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           minor 202]
          Length = 326

 Score = 77.8 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 4/119 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62
           E +H  FGI +   ++ E+  L+T  F ++ +T+ ++A   E         +G +  ++ 
Sbjct: 197 EEIHGKFGIALYEILRDEHSELFTPAFFEELQTLANQAFEAEKGILDWIFEEGDLSFISK 256

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQ 118
            +   Y++   N     +GLEP             W    I   KE +FF  R T+Y +
Sbjct: 257 ETVLNYIKSRYNNSLVTLGLEPPHNINPELLKETAWFDIEILSTKETDFFNKRSTDYSK 315


>gi|256820037|ref|YP_003141316.1| ribonucleotide reductase [Capnocytophaga ochracea DSM 7271]
 gi|315225453|ref|ZP_07867266.1| ribonucleoside-diphosphate reductase [Capnocytophaga ochracea
           F0287]
 gi|256581620|gb|ACU92755.1| ribonucleotide reductase [Capnocytophaga ochracea DSM 7271]
 gi|314944551|gb|EFS96587.1| ribonucleoside-diphosphate reductase [Capnocytophaga ochracea
           F0287]
          Length = 319

 Score = 77.0 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 5/120 (4%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LN 61
           DE LH N GI ++ +I  ENP +  K  ++ + T +     LE         +G +   +
Sbjct: 190 DEQLHANAGIYILKKIFEENPEMKAKA-EEDATTFIRSYITLEDKMLDWIFEQGELEFFS 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                 YM++  +    Q+GL   F  +     P  W  E +   +  +FF  R T Y +
Sbjct: 249 KKDLSNYMRYRLDDSLTQLGLGKPFGISGEEAKPMMWFEEEVFSNELDDFFAKRPTAYTK 308


>gi|240950330|ref|ZP_04754600.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           minor NM305]
 gi|240295141|gb|EER45960.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           minor NM305]
          Length = 326

 Score = 76.6 bits (188), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 4/119 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62
           E +H  FGI +   ++ E+  L+T  F ++ +T+  +A   E         +G +  ++ 
Sbjct: 197 EEIHGKFGIALYEILRDEHSELFTPAFFEELQTLASQAFEAEKGILDWIFEEGDLSFISK 256

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQ 118
            +   Y++   N     +GLEP             W    I   KE +FF  R T+Y +
Sbjct: 257 ETVLNYIKSRYNNSLVTLGLEPPHDINPELLKETAWFDIEILSTKETDFFNKRSTDYSK 315


>gi|254362523|ref|ZP_04978626.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica PHL213]
 gi|153094123|gb|EDN75022.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica PHL213]
          Length = 293

 Score = 76.6 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 4/119 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62
           E +H  FGI +   ++ E+  L+T EF +  +T+ ++A   E         +G +  +  
Sbjct: 164 EEIHGKFGIALYEILRDEHSELFTPEFFEDLQTLANQAFEAERGILDWIFEEGDLSFITK 223

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQ 118
            + E Y++   N     +GLEP             W    I   KE +FF  R T+Y +
Sbjct: 224 ATVENYIKNRYNNSLSILGLEPPHDIDPELLKETEWFDIEILSTKETDFFNKRSTDYSK 282


>gi|294505968|ref|YP_003570026.1| Ribonucleoside-diphosphate reductase beta subunit [Salinibacter
           ruber M8]
 gi|294342296|emb|CBH23074.1| Ribonucleoside-diphosphate reductase beta subunit [Salinibacter
           ruber M8]
          Length = 324

 Score = 76.6 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 4/119 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62
           E +H  FG++++N I+ E+P  +   F+Q+ R    EA   E          G +  L  
Sbjct: 195 EQIHGLFGVELMNIIREEHPEWFGPAFEQEVRAACEEAYDAEQKVLDWIFADGELDFLPR 254

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQQ 118
           P  + +++   N     + ++P+F+          W  E I L K  +FF  R T Y +
Sbjct: 255 PVVDAFLRDKFNESLKNVDVDPIFEVDPEHLGETRWFYEEILLTKGNDFFSKRSTSYSK 313


>gi|261494146|ref|ZP_05990649.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica serotype A2 str. BOVINE]
 gi|261310312|gb|EEY11512.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica serotype A2 str. BOVINE]
          Length = 325

 Score = 76.6 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 4/119 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62
           E +H  FGI +   ++ E+  L+T EF +  +T+ ++A   E         +G +  +  
Sbjct: 196 EEIHGKFGIALYEILRDEHSELFTPEFFEDLQTLANQAFEAERGILDWIFEEGDLSFITK 255

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQ 118
            + E Y++   N     +GLEP             W    I   KE +FF  R T+Y +
Sbjct: 256 ATVENYIKNRYNNSLSILGLEPPHDIDPELLKETEWFDIEILSTKETDFFNKRSTDYSK 314


>gi|228473186|ref|ZP_04057941.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
           gingivalis ATCC 33624]
 gi|228275336|gb|EEK14128.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
           gingivalis ATCC 33624]
          Length = 319

 Score = 76.2 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 5/120 (4%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LN 61
           DE +H N GI ++  I  ENP   TK  ++++   + E  LLE         +G +   +
Sbjct: 190 DEQVHANAGIYILKTIFDENPEFRTKA-KKEATEFIREYILLEDKMLDWIFEEGELEFFS 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                 YM++  +    Q+ L   F  T     P  W  E + + +  +FF  R T Y +
Sbjct: 249 KKDLANYMRYRLDDALTQLDLGKPFGITAEEAKPMLWFEEEVFVNELDDFFAKRPTAYTK 308


>gi|51518029|ref|YP_067954.1| BaRF1 [Macacine herpesvirus 4]
 gi|18025480|gb|AAK95424.1| BaRF1 [Macacine herpesvirus 4]
          Length = 302

 Score = 76.2 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 12/120 (10%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH      + N +         +   Q  + +   A  +E A+  E    G   ++
Sbjct: 186 RDELLHTRAASLLYNSMTA----PADRPGAQWIQELFRTAVEVETAFI-EARGWGVTLVD 240

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
             +  Q+++  A+R    IGL PL+      + P  +M+ +    K+ NFFE    +Y  
Sbjct: 241 VQAIRQFLEATADRILGDIGLPPLYGTPPPRDCPLTYMTSI----KQTNFFEQESADYTM 296


>gi|261885428|ref|ZP_06009467.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           fetus subsp. venerealis str. Azul-94]
          Length = 282

 Score = 76.2 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 30/66 (45%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+T E + K   M  +A  LEI +         +G  
Sbjct: 217 RDEITHLLLFQNMINSVRKERPDLFTSEVEAKIYEMFKKAGDLEIEWGKYITGNQIMGFT 276

Query: 62  APSCEQ 67
               E+
Sbjct: 277 DDIIEE 282


>gi|48696741|ref|YP_024565.1| ORF20 [Ostreid herpesvirus 1]
 gi|81986458|sp|Q6R7K3|RIR2_OSHVF RecName: Full=Ribonucleoside-diphosphate reductase small chain
 gi|41352405|gb|AAS00912.1| ORF20 [Ostreid herpesvirus 1]
          Length = 579

 Score = 76.2 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 58/122 (47%), Gaps = 13/122 (10%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+LH  F  +++         +  +   ++   +L EAT +E+ +A   +P+G   + 
Sbjct: 256 RDETLHFRFYAELLRL-------MPDRPSDERIAELLTEATEIELEFAEYVVPEGVKYIT 308

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE-----NPFPWMSEVIDLKKEKNFFETRVTEY 116
                Q+++   N+ C  + + P++   +     +P  +M+ +   +K  NFFE + TEY
Sbjct: 309 KDRLIQHVKANTNQVCEMLDINPIYFDQKGNVLLSPLLYMNTLESEQKI-NFFEGKATEY 367

Query: 117 QQ 118
             
Sbjct: 368 NT 369


>gi|300776394|ref|ZP_07086252.1| ribonucleoside-diphosphate reductase [Chryseobacterium gleum ATCC
           35910]
 gi|300501904|gb|EFK33044.1| ribonucleoside-diphosphate reductase [Chryseobacterium gleum ATCC
           35910]
          Length = 371

 Score = 75.5 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 4/120 (3%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGLN 61
           DE +H N GI +IN+I+ E P L T    +   T++ E+   E          G    ++
Sbjct: 241 DEQIHANAGIYLINKIREEQPDLLTDSDIEDIYTLVDESIAREGDILSWIFELGEIDNVS 300

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                 +M++  +    +I ++  +  T     P  W  E +      +FF  R  +Y +
Sbjct: 301 KEDLLNFMKYRVDDSLKKINMKTRYNITPEQYRPMVWFEEEVFANSLDDFFAKRPVDYTK 360


>gi|88801652|ref|ZP_01117180.1| ribonucleoside-diphosphate reductase, beta subunit [Polaribacter
           irgensii 23-P]
 gi|88782310|gb|EAR13487.1| ribonucleoside-diphosphate reductase, beta subunit [Polaribacter
           irgensii 23-P]
          Length = 424

 Score = 75.5 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 4/119 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62
           E +H +FGID+I  IK ENP  + ++     + M  EA + E         KG +  L  
Sbjct: 295 EQIHGDFGIDIIKIIKEENPDWFDEDHSLMVQEMCEEAFISESKIIDWIFEKGELDFLPK 354

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQQ 118
              +++++   N+    IG+  +F+          W  + I   K  +FF  R   Y +
Sbjct: 355 NVIKEFIKNRFNKSLGSIGIAKIFEIDATLLAQTDWFDDEIIGTKHGDFFVKRSINYSK 413


>gi|313206313|ref|YP_004045490.1| ribonucleotide reductase [Riemerella anatipestifer DSM 15868]
 gi|312445629|gb|ADQ81984.1| ribonucleotide reductase [Riemerella anatipestifer DSM 15868]
 gi|315023179|gb|EFT36190.1| ribonucleotide reductase [Riemerella anatipestifer RA-YM]
 gi|325336242|gb|ADZ12516.1| ribonucleoside-diphosphate reductase beta chain [Riemerella
           anatipestifer RA-GD]
          Length = 324

 Score = 75.5 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 4/120 (3%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LN 61
           DE +H N GI +IN+IK E P L  +E  +    ++  +  LE          G +  L+
Sbjct: 194 DEQIHANAGIYIINKIKEEQPELLQEEDIEAIYNIVKTSVELEAEILDWIFEMGDLDHLS 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                 +M++  +    +IG+  +F  TE    P  W  E +      +FF  R  +Y +
Sbjct: 254 KKQLLSFMKYRIDDSLKRIGMASMFNITEEEYKPMVWFEEEVFANSLDDFFAKRPVDYTK 313


>gi|312262463|gb|ADQ52758.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage PX29]
          Length = 376

 Score = 75.1 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 45/108 (41%), Gaps = 8/108 (7%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
           RDE LHL     +I   +   ++  +    +  + K+ ++  E    E  +A + +    
Sbjct: 234 RDEQLHLKGTQYLIRAWQNGDDDSEMVDIARRLESKAVSIFIEVAEQEKEWAKDLLGNVS 293

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVID 101
             GL+      Y+ ++   R   +GL    +     ++P PW+ + ++
Sbjct: 294 IPGLSLAEMIDYIDYLTGSRMRSVGLPVPDEVNVPIKHPLPWIRKWLN 341


>gi|18466786|ref|NP_569593.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. CT18]
 gi|16506102|emb|CAD09988.1| putative ribonucleoside-diphosphate reductase beta subunit
           [Salmonella enterica subsp. enterica serovar Typhi str.
           CT18]
          Length = 380

 Score = 75.1 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 6/105 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTK----EFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LH      +I  ++     L  K    E +      + +    E+ +A      G 
Sbjct: 239 RDEALHCEGTERMIRFMRTGREGLMWKMIAAEEESFIYQTMMDVAGQEMRWADYLFKDGS 298

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVI 100
            +GLNA   + Y+++  N    ++GL  LF +  ++P  WM++ +
Sbjct: 299 MIGLNADILKSYVKYRTNLAMRRLGLRQLFPEIKDDPLVWMNKWL 343


>gi|83814991|ref|YP_444284.1| ribonucleoside-diphosphate reductase, beta subunit [Salinibacter
           ruber DSM 13855]
 gi|83756385|gb|ABC44498.1| ribonucleoside-diphosphate reductase, beta subunit [Salinibacter
           ruber DSM 13855]
          Length = 324

 Score = 74.7 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 4/119 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62
           E +H  FG++++N I+ E+P  +   F+Q+ R    EA   E          G +  L  
Sbjct: 195 EQIHGLFGVELMNIIREEHPEWFGPAFEQEVRAACEEAYDAEQKVLDWIFADGELDFLPR 254

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQQ 118
           P  + +++   N     + ++P+F+          W  E + L K  +FF  R T Y +
Sbjct: 255 PVVDAFLRDKFNESLKNVDVDPIFEVDPEHLGETRWFYEEVLLTKGNDFFSKRSTSYSK 313


>gi|261496013|ref|ZP_05992423.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica serotype A2 str. OVINE]
 gi|261308263|gb|EEY09556.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica serotype A2 str. OVINE]
          Length = 325

 Score = 74.7 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 4/119 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62
           E +H  FGI +   ++ E+  L+T EF +  +T+ ++A   E         +G +  +  
Sbjct: 196 EEIHGKFGIALYEILRDEHSELFTPEFFEDLQTLANQAFEAERGILDWIFEEGDLSFITK 255

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQ 118
            + E Y++   N     +GLEP             W    I   KE +FF  R T+Y +
Sbjct: 256 ATVENYIKNRYNNSLSILGLEPPHDIDPEFLKETEWFDIEILSTKETDFFNKRSTDYSK 314


>gi|82503214|ref|YP_401656.1| BaRF1 [Human herpesvirus 4]
 gi|139424488|ref|YP_001129453.1| BaRF1 [Human herpesvirus 4 type 2]
 gi|238055355|sp|P0CAP6|RIR2_EBVB9 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase 38 kDa subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|238055356|sp|P0CAP7|RIR2_EBVA8 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase 38 kDa subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|238055357|sp|P0C701|RIR2_EBVG RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase 38 kDa subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|1334857|emb|CAA24843.1| unnamed protein product [Human herpesvirus 4]
 gi|23893602|emb|CAD53406.1| ribonucleoside-diphosphate reductase small chain [Human herpesvirus
           4]
 gi|64173256|gb|AAY41106.1| unknown [Human herpesvirus 4]
 gi|82703964|gb|ABB89233.1| BaRF1 [Human herpesvirus 4]
          Length = 302

 Score = 74.7 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 12/120 (10%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH      + N +  +      +      + +   A  +E A+  E   +G   ++
Sbjct: 186 RDELLHTRAASLLYNSMTAK----ADRPRATWIQELFRTAVEVETAFI-EARGEGVTLVD 240

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
             + +Q+++  A+R    IG  PL+      + P  +M+ +    K+ NFFE   ++Y  
Sbjct: 241 VRAIKQFLEATADRILGDIGQAPLYGTPPPKDCPLTYMTSI----KQTNFFEQESSDYTM 296


>gi|24943146|ref|NP_733908.1| ORF54 [Callitrichine herpesvirus 3]
 gi|13676697|gb|AAK38263.1|AF319782_57 ORF54 [callitrichine herpesvirus 3]
          Length = 302

 Score = 73.9 bits (181), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 43/119 (36%), Gaps = 10/119 (8%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
           RDE LH      + N +  K E P        +    +   A  +E  +  E   +G   
Sbjct: 186 RDELLHTTAATLLYNSMTSKSERPQ------SEWIEALFRRAVDVEYNFI-EARGRGVTN 238

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           ++      +++  A+R    +G+  ++     P       +   K  NFFE   +EY  
Sbjct: 239 IDLKGIRDFLEATADRILGDLGMTAIYDTRPPP-DCPLTYMTSVKHTNFFEQENSEYTM 296


>gi|32709437|gb|AAP86737.1| NrdB [Enterobacteria phage TuIa]
          Length = 391

 Score = 73.5 bits (180), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 7/107 (6%)

Query: 2   RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 57
           RDE LHL     +I Q++     +      KE +Q++  +  E    E  +A      G 
Sbjct: 248 RDEQLHLKGTQYIIRQLQSGTDGDEWVQIAKECEQEAVDIFMEVNSQEKEWAAHLFKDGT 307

Query: 58  -VGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101
             G+N  S   ++ ++   R  Q GL  P+    T++P+PW+ E ++
Sbjct: 308 CPGINTQSMCAFVDYLTVSRMKQCGLPCPITDAPTKHPYPWIREYLN 354


>gi|213962351|ref|ZP_03390614.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
           sputigena Capno]
 gi|213955017|gb|EEB66336.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
           sputigena Capno]
          Length = 319

 Score = 73.5 bits (180), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 5/120 (4%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL-N 61
           DE LH N GI ++ +I  E P + T   + ++   +    LLE         +G +   +
Sbjct: 190 DEQLHANAGIYILKKIFEERPEMKTIA-EHEATNFIRNYILLEDKMLDWIFEQGELEFFS 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                 YM++  +    Q+GL+  F  +     P  W  E +   +  +FF  R T Y +
Sbjct: 249 KKDLANYMRYRLDDSLTQLGLDKPFNISGDEAKPMMWFEEEVFSNELDDFFAKRPTAYTK 308


>gi|332878859|ref|ZP_08446574.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
           sp. oral taxon 329 str. F0087]
 gi|332683210|gb|EGJ56092.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
           sp. oral taxon 329 str. F0087]
          Length = 319

 Score = 73.5 bits (180), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 5/120 (4%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL-N 61
           DE LH N GI ++ +I  E P +  K  +  +   +    +LE         +G +    
Sbjct: 190 DEQLHANAGIYILKKIFEERPEMKAKA-EADATDFIRNYIVLEDKMLDWIFEQGELDFFG 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                 YM++  +    Q+GL   F  +     P  W  E +   +  +FF  R T Y +
Sbjct: 249 KKDLANYMRYRLDDSLTQLGLTKPFNISADEAKPMMWFEEEVFSNELDDFFAKRPTAYTK 308


>gi|146301802|ref|YP_001196393.1| ribonucleotide reductase [Flavobacterium johnsoniae UW101]
 gi|146156220|gb|ABQ07074.1| ribonucleotide reductase [Flavobacterium johnsoniae UW101]
          Length = 324

 Score = 73.5 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 48/120 (40%), Gaps = 4/120 (3%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGLN 61
           DE +H N GI +IN+I+ E P  + +E     R  + ++  +E         +G    + 
Sbjct: 194 DEQIHANGGIYIINKIREEFPDYFDEETLALVRETVKDSIAVESDILDWIFEEGEIESIK 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQ 118
                 +M+F  +    QI +  +F      +    W  E +      +FF  R  EY +
Sbjct: 254 KGDLVNFMKFRIDESLKQINIPVIFDVKVEDYKALAWFEEEVFANSLDDFFAKRPVEYTK 313


>gi|302321458|gb|ADL16651.1| RNR2 [Abalone herpesvirus Victoria/AUS/2007]
          Length = 642

 Score = 73.1 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 15/124 (12%)

Query: 1   MR-DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
           +R DE+LH +F   + N        +  +   +K + ++ +A  +EIA+A   + +    
Sbjct: 246 VRNDETLHGSFYAALHN-------IMPDRASPEKVKEIIVKAVEIEIAFAMSIVTEDLEH 298

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKY------TENPFPWMSEVIDLKKEKNFFETRV 113
           +N  S + +++  AN  C  +G+EP++          +P  +M+    L+K  NFFE R 
Sbjct: 299 INPSSMQLHIKATANLCCEFLGVEPIYFDRWTKLPVVSPLSYMNNYETLQKF-NFFEVRN 357

Query: 114 TEYQ 117
            +Y 
Sbjct: 358 MDYS 361


>gi|228861159|ref|YP_002854182.1| ribonucleotide reductase B subunit [Enterobacteria phage RB51]
 gi|227438833|gb|ACP31145.1| ribonucleotide reductase B subunit [Enterobacteria phage RB51]
          Length = 392

 Score = 73.1 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 7/107 (6%)

Query: 2   RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE LHL     +I Q+++    +      KE +Q++  +  E    E  +A      G 
Sbjct: 249 RDEQLHLKGTQYIIRQLQLGTDGDEWVKIAKECEQEAVDIFMEVNRQEKDWAVHLFKDGD 308

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101
             GLN  S   ++ ++   R  Q GL  P+     ++P+PW+ E ++
Sbjct: 309 VPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 355


>gi|32709431|gb|AAP86734.1| NrdB [Enterobacteria phage T2H]
          Length = 392

 Score = 73.1 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 7/107 (6%)

Query: 2   RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE LHL     +I Q+++    +      KE +Q++  +  E    E  +A      G 
Sbjct: 249 RDEQLHLKGTQYIIRQLQLGTDGDEWVKIAKECEQEAVDIFMEVNRQEKDWAVHLFKDGD 308

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101
             GLN  S   ++ ++   R  Q GL  P+     ++P+PW+ E ++
Sbjct: 309 VPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 355


>gi|330858746|ref|YP_004415121.1| putative ribonucleotide reductase B subunit [Shigella phage Shfl2]
 gi|327397680|gb|AEA73182.1| putative ribonucleotide reductase B subunit [Shigella phage Shfl2]
          Length = 389

 Score = 73.1 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 7/107 (6%)

Query: 2   RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE LHL     +I Q+++    +      +E +Q++  +  E    E  +A      G 
Sbjct: 246 RDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQEKDWAVHLFKDGD 305

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101
             GLN  S   ++ ++   R  Q GL  P+     ++P+PW+ E ++
Sbjct: 306 VPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 352


>gi|149408186|ref|YP_001294620.1| hypothetical protein ORF027 [Pseudomonas phage PA11]
          Length = 322

 Score = 72.8 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 48/130 (36%), Gaps = 9/130 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIE---NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           +RDE+LH   G  + N +K E            +       H     E         KG 
Sbjct: 191 VRDENLHCEGGAWLYNTLKQEIKSEGGYINPNLEYDLANCAHTIAEHEFRIVDMIFEKGE 250

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-PFPWMSEVIDLKKEKNFFETRVTE 115
             G+ A   + +++   N    Q+G+EP+F+ + N    W  + I+     +FF      
Sbjct: 251 MEGITAEQMKTFVKSRVNICLAQLGIEPVFEVSNNIVAEWFYDGINGVMFHDFFSGIGNS 310

Query: 116 YQQGAELKWD 125
           Y +     WD
Sbjct: 311 YNRS----WD 316


>gi|38639969|ref|NP_943924.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage Aeh1]
 gi|33414658|gb|AAQ17701.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage Aeh1]
          Length = 376

 Score = 72.8 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 45/108 (41%), Gaps = 8/108 (7%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
           RDE LHL     +I   +   ++  ++   K  + K+  +  E    E  +A + +    
Sbjct: 234 RDEQLHLKGTQYLIRAWQNAEDDSEMYEIAKRLEHKAVQIFLEVAEQEKEWARDLLGNVT 293

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVID 101
             GL+  S   Y+ ++   R    GL    +     ++P PW+ + ++
Sbjct: 294 IPGLSLSSMLDYIDYLTVSRMRSAGLPAPEELNIGMKHPLPWIRKWLN 341


>gi|326804582|ref|YP_004327453.1| Ribonucleotide-diphosphate reductase beta subunit [Salmonella phage
           Vi01]
 gi|301795232|emb|CBW37950.1| Ribonucleotide-diphosphate reductase beta subunit [Salmonella phage
           Vi01]
          Length = 367

 Score = 72.4 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 8/106 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPH--LWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FV 58
           RDE  HL      +N++ + +P   +  +E + +   M  +    E  +A+     G  +
Sbjct: 232 RDEQDHLILTQTFLNRLPLLDPDFGIIREELRGEMTQMYVDVVNQEKEWANYLFKDGSML 291

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVID 101
           GLNA    Q + ++A  R   IG    +      +NP PW++E +D
Sbjct: 292 GLNANILHQMVDWLATHRMGAIGHP--YPGQARKDNPVPWINEWLD 335


>gi|299779174|ref|YP_003734368.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           IME08]
 gi|298105903|gb|ADI55547.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           IME08]
          Length = 389

 Score = 72.4 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 7/107 (6%)

Query: 2   RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 57
           RDE LHL     +I Q+++    +      +E +Q++  +  E    E  +A      G 
Sbjct: 246 RDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQEKEWATHLFKDGT 305

Query: 58  -VGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101
             GLN  +   ++ ++   R  Q GL  P+    T +P+PW+ E ++
Sbjct: 306 CPGLNTQNMGAFVDYLTVSRMKQCGLPCPITDAPTRHPYPWIREYLN 352


>gi|116326446|ref|YP_803166.1| ribonucleotide reductase B subunit [Enterobacteria phage RB32]
 gi|32709425|gb|AAP86731.1| NrdB [Enterobacteria phage RB32]
 gi|115344039|gb|ABI95048.1| ribonucleotide reductase B subunit [Enterobacteria phage RB32]
          Length = 392

 Score = 72.4 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 7/107 (6%)

Query: 2   RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE LHL     +I Q++     +      +E +Q++  +  E    E  +A      G 
Sbjct: 249 RDEQLHLKGTQYIIRQLQSGTDGDEWVKIAQECEQEAVDIFMEVNRQEKDWAVHLFKDGD 308

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101
             GLN  S   ++ ++   R  Q GL  P+     ++P+PW+ E ++
Sbjct: 309 VPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 355


>gi|9632793|ref|NP_049841.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage T4]
 gi|1172940|sp|P11156|RIR2_BPT4 RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Protein B2; AltName: Full=Ribonucleotide
           reductase
 gi|5354417|gb|AAD42624.1|AF158101_211 NrdB aerobic NDP reductase, small subunit [Enterobacteria phage T4]
 gi|15342|emb|CAA27757.1| small subunit B2 [Enterobacteria phage T4]
 gi|299780589|gb|ADJ39951.1| aerobic NDP reductase small subunit [Enterobacteria phage T4T]
          Length = 388

 Score = 72.0 bits (176), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 7/107 (6%)

Query: 2   RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE LHL     +I Q++     +      +E +Q++  +  E    E  +A      G 
Sbjct: 245 RDEQLHLKGTQYIIRQLQSGTDGDEWVKIAQECEQEAVDIFMEVNRQEKDWAVHLFKDGD 304

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101
             GLN  S   ++ ++   R  Q GL  P+     ++P+PW+ E ++
Sbjct: 305 VPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 351


>gi|145637995|ref|ZP_01793631.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
          influenzae PittHH]
 gi|145268805|gb|EDK08772.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
          influenzae PittHH]
          Length = 115

 Score = 72.0 bits (176), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 5/77 (6%)

Query: 2  RDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
          RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E A+A      G 
Sbjct: 13 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGS 72

Query: 57 FVGLNAPSCEQYMQFIA 73
           +GLN     QY+++I 
Sbjct: 73 MIGLNRDILVQYVEYIT 89


>gi|32709433|gb|AAP86735.1| NrdB [Enterobacteria phage U5]
          Length = 391

 Score = 72.0 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 7/107 (6%)

Query: 2   RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE LHL     +I Q++     +      +E +Q++  +  E    E  +A      G 
Sbjct: 248 RDEQLHLKGTQYIIRQLQSGTDGDEWVKIAQECEQEAVDIFMEVNRQEKDWAVHLFKDGD 307

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101
             GLN  S   ++ ++   R  Q GL  P+     ++P+PW+ E ++
Sbjct: 308 VPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 354


>gi|161622513|ref|YP_001595352.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           JS98]
 gi|160213819|gb|ABX11158.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           JS98]
          Length = 379

 Score = 71.6 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 7/107 (6%)

Query: 2   RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 57
           RDE LHL     +I Q+++    +      +E +Q++  +  E    E  +A      G 
Sbjct: 236 RDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQEKEWAAHLFKDGT 295

Query: 58  -VGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101
             GLN  +   ++ ++   R  Q GL  P+    T +P+PW+ E ++
Sbjct: 296 CPGLNTQNMGAFVDYLTVSRMKQCGLPCPITDAPTRHPYPWIREYLN 342


>gi|67906414|gb|AAY82584.1| ribonucleotide reductase subunit 2 [Carassius carassius]
          Length = 246

 Score = 71.6 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 7/59 (11%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE LH +F   +         HL  K  ++  + ++  A  +E  +  + +P   +G+
Sbjct: 195 RDEGLHCDFACLMFK-------HLVNKPSEETVKKIIVNAVAIEQEFLTDALPVKLIGM 246


>gi|291290450|dbj|BAI83245.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage
           AR1]
          Length = 392

 Score = 71.6 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 7/107 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENP-HLWTK---EFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE LHL     +I Q++       W K   E +Q++  +  E    E  +A      G 
Sbjct: 249 RDEQLHLKGTQYIIRQLQSGTDGDQWVKIAQECEQEAVDIFMEVNRQEKDWAVHLFKDGD 308

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101
             GLN  S   ++ ++   R  Q GL  P+     ++P+PW+ E ++
Sbjct: 309 VPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 355


>gi|228861541|ref|YP_002854562.1| ribonucleotide reductase B subunit [Enterobacteria phage RB14]
 gi|227438557|gb|ACP30870.1| ribonucleotide reductase B subunit [Enterobacteria phage RB14]
          Length = 392

 Score = 71.6 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 7/107 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENP-HLWTK---EFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE LHL     +I Q++       W K   E +Q++  +  E    E  +A      G 
Sbjct: 249 RDEQLHLKGTQYIIRQLQSGTDGDQWVKIAQECEQEAVDIFMEVNRQEKDWAVHLFKDGD 308

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101
             GLN  S   ++ ++   R  Q GL  P+     ++P+PW+ E ++
Sbjct: 309 VPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 355


>gi|32709423|gb|AAP86730.1| NrdB [Enterobacteria phage RB27]
          Length = 392

 Score = 71.6 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 7/107 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENP-HLWTK---EFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE LHL     +I Q++       W K   E +Q++  +  E    E  +A      G 
Sbjct: 249 RDEQLHLKGTQYIIRQLQSGTDGDQWVKIAQECEQEAVDIFMEVNRQEKDWAVHLFKDGD 308

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101
             GLN  S   ++ ++   R  Q GL  P+     ++P+PW+ E ++
Sbjct: 309 VPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 355


>gi|238695377|ref|YP_002922570.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage
           JS10]
 gi|220029513|gb|ACL78447.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage
           JS10]
          Length = 379

 Score = 71.2 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 7/107 (6%)

Query: 2   RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 57
           RDE LHL     +I Q+++    +      +E +Q++  +  E    E  +A      G 
Sbjct: 236 RDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQEKEWAGHLFKDGT 295

Query: 58  -VGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101
             GLN  +   ++ ++   R  Q GL  P+    T +P+PW+ E ++
Sbjct: 296 CPGLNTQNMGAFVDYLTVSRMKQCGLPCPITDAPTRHPYPWIREYLN 342


>gi|310722637|ref|YP_003969460.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage phiAS5]
 gi|306021480|gb|ADM80014.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage phiAS5]
          Length = 376

 Score = 71.2 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 46/110 (41%), Gaps = 8/110 (7%)

Query: 2   RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETM-PKG 56
           RDE LHL      I   +   ++P +    K  + K+  +  +A   E  +A + +    
Sbjct: 234 RDEQLHLKGTQYQIRTWQNGEDDPEMVDIAKRLESKAVQIFLDAAEQEKEWARDLLSRVS 293

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLK 103
              L+  S   Y+ ++   R    GL    +    +++P PW+ + ++ +
Sbjct: 294 IPSLSLQSMLDYIDYLTASRMQSAGLPIPEELNVPSKHPLPWIRKWLNSE 343


>gi|18653874|ref|NP_570808.1| small ribonucleotide reductase [Macacine herpesvirus 5]
 gi|4494972|gb|AAD21394.1| small ribonucleotide reductase [Macaca mulatta rhadinovirus 17577]
          Length = 314

 Score = 71.2 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 41/119 (34%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH      + N +   +              +  EA  +E  +      +    +N
Sbjct: 199 RDELLHTRAASLLYNTMISRDES----PSVAYIHGLFREAVEIETLFIRSK-SRDVTMVN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
               EQ++Q  A+R    I + PLF     N  P        K   NFFE   +EY   
Sbjct: 254 VGDIEQFLQATADRILKSINIPPLFGARPPNACP--LSYTSAKSV-NFFERDNSEYVTS 309


>gi|46519447|gb|AAT00095.1| JM118 [Macaca fuscata rhadinovirus]
          Length = 314

 Score = 70.8 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 42/119 (35%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH      + N +   +              +  EA  +E  +      +G   +N
Sbjct: 199 RDELLHTRAAGLLYNTMISRDES----PSVAYIHGLFREAVEIETLFIRSK-SRGVTMVN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
               EQ++Q  A+R    I + PLF     N  P        K   NFFE   +EY   
Sbjct: 254 VGDIEQFLQATADRILKSINVPPLFGARPPNACP--LSYTSAKSV-NFFERDNSEYVTS 309


>gi|7330057|gb|AAF60046.1|AF210726_67 small ribonuclease reductase [Rhesus monkey rhadinovirus H26-95]
          Length = 304

 Score = 70.8 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 41/119 (34%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH      + N +   +              +  EA  +E  +      +    +N
Sbjct: 189 RDELLHTRAASLLYNTMISRDES----PSVAYIHGLFREAVEIETLFIRSK-SRDVTMVN 243

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
               EQ++Q  A+R    I + PLF     N  P        K   NFFE   +EY   
Sbjct: 244 VGDIEQFLQATADRILKSINIPPLFGARPPNACP--LSYTSAKSV-NFFERDNSEYVTS 299


>gi|37651592|ref|NP_932466.1| hypothetical protein 44RRORF111c [Aeromonas phage 44RR2.8t]
 gi|66391913|ref|YP_238838.1| hypothetical protein PHG31p109 [Aeromonas phage 31]
 gi|34732892|gb|AAQ81430.1| hypothetical protein 44RRORF111c [Aeromonas phage 44RR2.8t]
 gi|62114750|gb|AAX63598.1| hypothetical protein PHG31p109 [Aeromonas phage 31]
          Length = 323

 Score = 70.8 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 46/128 (35%), Gaps = 9/128 (7%)

Query: 3   DESLHLNFGIDVINQIKIE--NPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
           DE  H   G  +   +  E    H     ++ +     M H+    E         +   
Sbjct: 192 DEHHHSIGGAMLFRTLCREMMEHHKVDVREKLKDDIIAMAHQVYDHESGIIDLVFAEPID 251

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKNFFETRVTEYQ 117
           G+ A     +++   N     +G +P+F+   NP   W    I+ KK  +FF    +EY 
Sbjct: 252 GITADELRIFVKSRINLCLENLGYDPIFEIESNPIASWFYRTINAKKFHDFFTGSGSEYN 311

Query: 118 QGAELKWD 125
               + WD
Sbjct: 312 ----INWD 315


>gi|30348565|emb|CAC84357.1| RRsmall [Saimiriine herpesvirus 2]
          Length = 305

 Score = 70.4 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 45/127 (35%), Gaps = 14/127 (11%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +    + N +         +  +     +  EA  +E  +       G   +N
Sbjct: 189 RDEMLHTSAAALLYNTMTK----SSERPSEDWIYKLFREAVEVEFKFIA-AKGHGVSLVN 243

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKY--TEN-PFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                Q++Q  A+R    I L P++     EN P           K  NFFE   ++Y  
Sbjct: 244 VHEIRQFLQATADRILESINLNPIYGSLPPENCPL----AYTSSTKSVNFFERDNSDYT- 298

Query: 119 GAELKWD 125
              L  D
Sbjct: 299 -GTLTND 304


>gi|261599112|ref|YP_003257364.1| ribonucleotide-diphosphate reductase beta subunit [Blattabacterium
           sp. (Periplaneta americana) str. BPLAN]
 gi|261497769|gb|ACX84218.1| ribonucleotide-diphosphate reductase beta subunit [Blattabacterium
           sp. (Periplaneta americana) str. BPLAN]
          Length = 357

 Score = 70.1 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 50/129 (38%), Gaps = 8/129 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVG 59
           +RDESLH   G  +      EN  L  +  ++     +  A   E  +  +    +    
Sbjct: 192 VRDESLHSEAGCKIFRTFCEENKGLK-EIVERSVYHGVDLALKNEFVFIDKIFGGRDLCT 250

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYT----ENPFPWMSEVIDLKKEKNFFETRVTE 115
           +     + +M+  AN +  ++G    +       +N   W    I  +++ +FF+ R T 
Sbjct: 251 IKREELKNFMKDRANMKLRELGFFDSYHVDRRMLDN-MNWFYITISGEQQTDFFDNRETG 309

Query: 116 YQQGAELKW 124
           Y +  E  W
Sbjct: 310 YSKPNE-DW 317


>gi|258544274|ref|ZP_05704508.1| ribonucleoside-diphosphate reductase, beta subunit [Cardiobacterium
           hominis ATCC 15826]
 gi|258520512|gb|EEV89371.1| ribonucleoside-diphosphate reductase, beta subunit [Cardiobacterium
           hominis ATCC 15826]
          Length = 325

 Score = 69.7 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 47/119 (39%), Gaps = 4/119 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LNA 62
           E +H  FGI +   I+ E+P L+T +F  + + + + A   E          G +  +  
Sbjct: 196 EEIHGRFGIALYGIIRDEHPRLFTPDFYDELQQLANHALEAERGILRWIFEDGDLDFITL 255

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQQ 118
            + E Y+    N     +G+   +           W    I   KE +FF  R T+Y +
Sbjct: 256 DTVENYITNRYNNSLEILGINAPYLVDTKKLRETEWFDIEILSGKEGDFFYKRSTDYSK 314


>gi|148688624|gb|EDL20571.1| mCG140327 [Mus musculus]
          Length = 65

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%)

Query: 70  QFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAELK 123
           +F+A+    ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+   + 
Sbjct: 1   EFVADMLMLELGFNKIFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGVMS 52


>gi|9626016|ref|NP_040262.1| ribonucleotide reductase, small subunit [Saimiriine herpesvirus 2]
 gi|266917|sp|Q01038|RIR2_SHV21 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|66391|pir||WMBEP5 ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain -
           saimiriine herpesvirus 1 (strain 11)
 gi|60381|emb|CAA45683.1| ribonucleotide reductase, small subunit [Saimiriine herpesvirus 2]
 gi|330989|gb|AAA46136.1| ribonucleotide reductase small subunit [Saimiriine herpesvirus 2]
          Length = 305

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 45/127 (35%), Gaps = 14/127 (11%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +    + N +         +  +     +  EA  +E  +       G   +N
Sbjct: 189 RDEMLHTSAAALLYNTMTK----SSERPSEDWIYKLFREAVEVEFKFIA-AKGYGVSLVN 243

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKY--TEN-PFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                Q++Q  A+R    I L P++     EN P           K  NFFE   ++Y  
Sbjct: 244 VHEIRQFLQATADRILESINLNPIYGSLPPENCPL----AYTSSTKSVNFFERDNSDYT- 298

Query: 119 GAELKWD 125
              L  D
Sbjct: 299 -GTLTND 304


>gi|290992332|ref|XP_002678788.1| predicted protein [Naegleria gruberi]
 gi|284092402|gb|EFC46044.1| predicted protein [Naegleria gruberi]
          Length = 330

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 10/108 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H NF   + + +K       +K  Q    +++ EA  +E  +   ++P   + L+
Sbjct: 206 RDEEFHSNFLYSLYSNLK------HSKLPQTLVHSLVKEAVDIEKEFIT-SLPTELIELD 258

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 109
             S  QY++ +++      G E LF +TEN   W+ ++  L  +  FF
Sbjct: 259 RNSMYQYVEVVSDNILISFGYEKLF-HTENQCSWIQDM--LMNKSGFF 303


>gi|326800312|ref|YP_004318131.1| ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
 gi|326551076|gb|ADZ79461.1| Ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
          Length = 327

 Score = 68.9 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 60/127 (47%), Gaps = 17/127 (13%)

Query: 3   DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
           DES+H  F      D+  ++  +      +E ++K   +L      E+ Y  E      V
Sbjct: 197 DESIHGVFVGLLAQDIFRKLSNQ------EEVKKKVVDLLMLLYENELKYTEEIYTD--V 248

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEY 116
           GL A   ++Y+++ AN+    +G E LF+  E NP   +   ++L+  + +FF  + T Y
Sbjct: 249 GLTAE-VKEYVRYNANKALMNLGFEELFEVKEVNPI--VLNGLNLETTQHDFFSKKSTNY 305

Query: 117 QQGAELK 123
           ++  ++ 
Sbjct: 306 EKATQIS 312


>gi|282599256|ref|YP_003358568.1| NrdB ribonucleotide reductase subunit beta [Shigella phage
           phiSboM-AG3]
 gi|226973562|gb|ACO94315.1| NrdB ribonucleotide reductase subunit beta [Shigella phage
           phiSboM-AG3]
          Length = 367

 Score = 68.9 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 4/104 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENP--HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FV 58
           RDE  HL     ++N++   +P   +  +E + +   M  +    E  +A      G  +
Sbjct: 232 RDEQDHLILTQTLLNRLPGMDPDFEIIREELRGEMTQMFLDVGNQEKQWADYLFQDGSML 291

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVID 101
           GLNA      + ++   R   IG   P     E P PW++E ++
Sbjct: 292 GLNAKILHHMVDWLLTHRMGAIGHPYPGEPRKECPVPWINEWLN 335


>gi|284504289|ref|YP_003407004.1| ribonucleotide reductase small chain [Marseillevirus]
 gi|282935727|gb|ADB04042.1| ribonucleotide reductase small chain [Marseillevirus]
          Length = 280

 Score = 68.9 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 3/117 (2%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DE+LH  F   V   I ++    + +  Q++ + +L  A      + H+ +    V ++A
Sbjct: 154 DEALHQRFAEAVYRYI-VDVIKAFPRVSQERVQEILGSAIDAVSPFIHDCLRFKNVNIDA 212

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                YM+  A+     +G E  F  +++   +M  +I +  + NFFE  V +Y +G
Sbjct: 213 ERMIGYMKNAADGLAFSLGYEKFFN-SDSSLDYML-LIGMDNKTNFFEEVVADYAKG 267


>gi|109290088|ref|YP_656337.1| hypothetical protein PHG25ORF102c [Aeromonas phage 25]
 gi|104345761|gb|ABF72661.1| hypothetical protein PHG25ORF102c [Aeromonas phage 25]
          Length = 332

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 42/120 (35%), Gaps = 5/120 (4%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFV 58
           DE  H   G  +   +  E    + ++     +     M  +    E         +   
Sbjct: 201 DEHHHSIGGAMLFQTLCREMKEKYGEDVRAKLKNDIINMARQVFDHESGIIDLVFAEPID 260

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKNFFETRVTEYQ 117
           G+ A     +++   N     +G EP+F+   NP   W    I+ KK  +FF    +EY 
Sbjct: 261 GITADELRVFVKSRINLCLENLGYEPIFEIENNPIADWFYRTINAKKFHDFFTGSGSEYN 320


>gi|83642896|ref|YP_438184.1| ORF60 [Ovine herpesvirus 2]
 gi|61971010|gb|AAX58095.1| ORF60 [Ovine herpesvirus 2]
 gi|78127895|gb|ABB22279.1| ribonucleotide-reductase small subunit-like protein [Ovine
           herpesvirus 2]
          Length = 305

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 43/123 (34%), Gaps = 18/123 (14%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL- 60
           RDE LH      + N +  +      K  +     +  EA  +E  +       G VG  
Sbjct: 189 RDELLHTRAAALLYNTVIPQEG----KPSEAWIIDLFKEAVSIEDEFIRA--KSGEVGFV 242

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKEKN--FFETRVTE 115
           N     ++++  A+R  + IGL   F        P  +          KN  FFE   TE
Sbjct: 243 NVADIRRFLEATADRLLNSIGLPVHFKSEPPKSCPLTY------TGCIKNVSFFERESTE 296

Query: 116 YQQ 118
           Y  
Sbjct: 297 YST 299


>gi|311993225|ref|YP_004010091.1| aerobic NDP reductase, small subunit [Enterobacteria phage CC31]
 gi|284178063|gb|ADB81729.1| aerobic NDP reductase, small subunit [Enterobacteria phage CC31]
          Length = 379

 Score = 68.1 bits (166), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 7/107 (6%)

Query: 2   RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
           RDE LHL     +I Q+++    E      +E +Q++  +  E    E  +A       G
Sbjct: 236 RDEQLHLKGTQYIIRQLQLGTDGEEWVQIARECEQEAVDIFMEINRQEKEWAVHLWRDGG 295

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101
             GL+      ++ ++   R    GL  P+      +P PW+ E ++
Sbjct: 296 VPGLSVKILHDFIDYLTVSRMRSCGLPCPITDAPVRHPIPWIREYLN 342


>gi|9631250|ref|NP_048031.1| small subunit of ribonucleotide reductase [Ateline herpesvirus 3]
 gi|4019286|gb|AAC95584.1| small subunit of ribonucleotide reductase [Ateline herpesvirus 3]
          Length = 305

 Score = 68.1 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 43/118 (36%), Gaps = 12/118 (10%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +    + N +         +  ++    +  EA  +E  +    +  G   +N
Sbjct: 189 RDEMLHTSAAALLYNTMTK----PSERPPEKWIYELFREAVEVEFKFISAKV-HGVSHVN 243

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                Q++Q  A+R    I L P++        P           K  NFFE   ++Y
Sbjct: 244 VHEIRQFLQATADRILESINLNPIYHSVPPANCPL----VYTSSTKSVNFFERDNSDY 297


>gi|146329200|ref|YP_001209518.1| ribonucleotide reductase, beta subunit [Dichelobacter nodosus
           VCS1703A]
 gi|146232670|gb|ABQ13648.1| ribonucleotide reductase, beta subunit [Dichelobacter nodosus
           VCS1703A]
          Length = 325

 Score = 67.8 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 4/119 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGLNA 62
           E +H  FGI + + IK E+P L+T  F    +T+  +A   E    +     G    L  
Sbjct: 196 EEIHGRFGIALYHIIKEEHPDLFTDSFYHHLKTLADQALAAERGILNWIFENGDLPFLQQ 255

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQ 118
            + E Y+    N     +G+E  +   E       W    I   KE +FF  R T+Y +
Sbjct: 256 KTVENYIVNRYNNSLSVLGIESPYTVDEERLKETQWFDIEILSGKENDFFYKRSTDYSK 314


>gi|321496611|ref|YP_004207896.1| ribonucleotide reductase small subunit [Rodent herpesvirus Peru]
 gi|320332513|gb|ADW24401.1| ribonucleotide reductase small subunit [Rodent herpesvirus Peru]
 gi|320332596|gb|ADW24483.1| ribonucleotide reductase small subunit [Rodent herpesvirus Peru]
          Length = 307

 Score = 67.8 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 12/121 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH      + N +   +     K        +  EA  +EI +  E   +G   +N
Sbjct: 191 RDELLHTRAAALLYNTLVDPDR----KPPVHWIHNLFREAVDVEIRFIRER-GRGVTAVN 245

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                 +++  A+R   QI L  L+     +  P  + + V ++    NFFE   T+Y  
Sbjct: 246 IEDIISFLKATADRMLTQIKLPILYGELAPSGCPLAFNACVKNI----NFFEREGTDYSS 301

Query: 119 G 119
            
Sbjct: 302 S 302


>gi|9628063|ref|NP_042657.1| ribonucleotide reductase, small subunit [Equid herpesvirus 2]
 gi|82013696|sp|Q66662|RIR2_EHV2 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|695233|gb|AAC13848.1| ribonucleotide reductase, small subunit [Equid herpesvirus 2]
          Length = 305

 Score = 67.4 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 44/119 (36%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H      + N +  +      K   +    +  EA  +E  +      +G   +N
Sbjct: 189 RDEWVHTRAAALLFNTLVPDE----EKPSPEWIGALFREAVEVEYNFI-LAKGRGVSHVN 243

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENP-FPWMSEVIDLKKEKNFFETRVTEYQQG 119
                ++++  A+R    I + P++     P  P +       K  NFFE   ++Y   
Sbjct: 244 VADINRFLEATADRILKSINVGPVYGTQPPPNCPLV--YTGCLKNVNFFERESSDYTTA 300


>gi|227537625|ref|ZP_03967674.1| ribonucleoside-diphosphate reductase [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|300771015|ref|ZP_07080892.1| ribonucleotide-diphosphate reductase subunit beta [Sphingobacterium
           spiritivorum ATCC 33861]
 gi|227242511|gb|EEI92526.1| ribonucleoside-diphosphate reductase [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|300762288|gb|EFK59107.1| ribonucleotide-diphosphate reductase subunit beta [Sphingobacterium
           spiritivorum ATCC 33861]
          Length = 328

 Score = 67.4 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 21/128 (16%)

Query: 3   DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
           DES+H  F      D+  +I  +      +E + +  T+L+E    E+ Y  E      V
Sbjct: 198 DESIHGVFVGLIAQDIFRRIPNK------EEVKARFLTLLNELYENELKYTEEIY--TVV 249

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVT 114
           GL A   ++Y+++  N+    +G +P+F+  + NP      +  L  E    +FF  + T
Sbjct: 250 GLTAE-VKEYVRYNGNKALMNLGFDPIFEVKQVNPI----VLNGLNTETTQHDFFSKKST 304

Query: 115 EYQQGAEL 122
            Y++  E+
Sbjct: 305 NYEKATEI 312


>gi|310722361|ref|YP_003969185.1| hypothetical protein phiAS4_ORF0167 [Aeromonas phage phiAS4]
 gi|306021204|gb|ADM79739.1| hypothetical protein phiAS4_ORF0167 [Aeromonas phage phiAS4]
          Length = 332

 Score = 67.4 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 43/120 (35%), Gaps = 5/120 (4%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFV 58
           DE  H   G  +   +  E    + ++     +     M ++    E         +   
Sbjct: 201 DEHHHSIGGAMLFQTLCREMKEKYGEDVRAKLKNDIINMAYQVFDHESGIIDLVFAEPID 260

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKNFFETRVTEYQ 117
           G+ A     +++   N     +G EP+F+   NP   W    I+ KK  +FF    +EY 
Sbjct: 261 GITADELRVFVKSRINLCLENLGYEPIFEIENNPIADWFYRTINAKKFHDFFTGSGSEYN 320


>gi|225619347|ref|YP_002720573.1| ribonucleoside-diphosphate reductase subunit beta [Brachyspira
           hyodysenteriae WA1]
 gi|225214166|gb|ACN82900.1| ribonucleoside-diphosphate reductase, beta subunit [Brachyspira
           hyodysenteriae WA1]
          Length = 356

 Score = 67.4 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 10/132 (7%)

Query: 3   DE-SLHLNFGIDVINQIKIENPHLWTKEFQ-----QKSRTMLHEATLLEIAYAHETM-PK 55
           DE + H+  G +V+N ++ EN   +T  F+     + +R M       EI +A       
Sbjct: 225 DELNTHVPTGKNVMNILRKENEQGFTHLFKSGWFNETARAMAEFTVNEEIKWAKYLFDGY 284

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKE-KNFFETRV 113
              G+N+   E ++++ A  R   +G+E  +   + +   W +   D+ K+     ET  
Sbjct: 285 QVAGINSSVSEHFIKYWAGVRLRDLGVESPYNEKKSDVIDWFNSYRDINKQNAALQETTN 344

Query: 114 TEYQQGAELKWD 125
           T YQ+   LK D
Sbjct: 345 TSYQK-GALKND 355


>gi|311992967|ref|YP_004009834.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage
           Acj61]
 gi|295815256|gb|ADG36182.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage
           Acj61]
          Length = 377

 Score = 66.2 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 7/109 (6%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LH      +I +++   E P      +E ++++  +       E  +       G 
Sbjct: 232 RDENLHHQGTRYMIKRLQSGEEGPEWIKIAEECREEATNIFLATNEQEKEWCKYVYQSGA 291

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLE--PLFKYTENPFPWMSEVIDLK 103
             GL+      Y+ +    R +++GL+   +     NPFPW+++ +   
Sbjct: 292 PQGLSVGLVSDYIDYATVPRMNELGLDSSSIVAPKRNPFPWLTKFLKSN 340


>gi|323512793|gb|ADX88247.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2006_D]
 gi|323513021|gb|ADX88474.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2006_C]
 gi|323513246|gb|ADX88698.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2006_B]
 gi|323513473|gb|ADX88924.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2006_A]
 gi|323513704|gb|ADX89154.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2005_A]
          Length = 450

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 50/104 (48%), Gaps = 4/104 (3%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWT-KEFQQKSRTMLHEATLLEIAYAHETM--PKGFVG 59
           DE++H      +IN +  +   L T ++ +   + ++      E++++       +  VG
Sbjct: 231 DETIHTRMDEAIINILLGDEVWLKTFEDIKPDIKEIVDSVYKQELSWSEYIFSEGRSIVG 290

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDL 102
           LN    ++++Q+ +     ++G+E  F+    NP PWM   +D+
Sbjct: 291 LNTSLLKEWVQYKSQVVYKKLGIEQPFEDVINNPLPWMENWLDI 334


>gi|325171172|ref|YP_004251147.1| ribonucleoside diphosphate reductase, beta chain [Vibrio phage
           ICP1]
 gi|323512567|gb|ADX88022.1| ribonucleoside diphosphate reductase, beta chain [Vibrio phage
           ICP1]
 gi|323513935|gb|ADX89384.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2001_A]
 gi|323514163|gb|ADX89611.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2004_A]
          Length = 450

 Score = 65.4 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 50/104 (48%), Gaps = 4/104 (3%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWT-KEFQQKSRTMLHEATLLEIAYAHETM--PKGFVG 59
           DE++H      +IN +  +   L T ++ +   + ++      E++++       +  VG
Sbjct: 231 DETIHTRMDEAIINILLGDEVWLKTFEDIKPDIKEIVDSVYKQELSWSEYIFSEGRSIVG 290

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDL 102
           LN    ++++Q+ +     ++G+E  F+    NP PWM   +D+
Sbjct: 291 LNTSLLKEWVQYKSQVVYKKLGIEQPFEDVINNPLPWMENWLDI 334


>gi|213581345|ref|ZP_03363171.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-0664]
          Length = 90

 Score = 65.4 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 5/83 (6%)

Query: 48  YAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKE 105
           +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +
Sbjct: 1   WADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQ 60

Query: 106 KNFFETRVTEY---QQGAELKWD 125
               E  V+ Y   Q  +E+  D
Sbjct: 61  VAPQEVEVSSYLVGQIDSEVDTD 83


>gi|260889741|ref|ZP_05901004.1| ribonucleoside-diphosphate reductase, beta subunit [Leptotrichia
           hofstadii F0254]
 gi|260860347|gb|EEX74847.1| ribonucleoside-diphosphate reductase, beta subunit [Leptotrichia
           hofstadii F0254]
          Length = 335

 Score = 65.4 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 53/119 (44%), Gaps = 7/119 (5%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DES+H  F   +  ++          + + + + ++++    E  Y  E      +GL  
Sbjct: 200 DESIHGVFVGLLFQELYNSFSEEEKADMRAELKKLMYDLYENETRYTDEIYGD--LGLTG 257

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
              ++Y+++ AN+    +G E  F+    NP   +   ++++  + +FF  + T Y++ 
Sbjct: 258 D-VKEYIRYNANKALMNLGFEEEFEVKNVNPI--VLNGLNVETTQHDFFSKKSTNYEKA 313


>gi|10140982|ref|NP_065559.1| ribonucleotide-reductase, small subunit [Alcelaphine herpesvirus 1]
 gi|81984051|sp|O36410|RIR2_ALHV1 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2338023|gb|AAC58107.1| ribonucleotide-reductase, small subunit [Alcelaphine herpesvirus 1]
          Length = 305

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 43/121 (35%), Gaps = 16/121 (13%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH      + N +  +      +   +   ++  EA  +E A+      K    ++
Sbjct: 189 RDELLHTRAAALLYNTMIPKE----ERPSSEWVVSLFKEAVEIECAFIEAKT-KQVTFVS 243

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN--FFETRVTEY 116
                 +++  A+R  + I L   +K       P  +          KN  FFE   TEY
Sbjct: 244 MDDIRAFLEATADRLLNSIELPRYYKSDPPQSCPLTY------TGCIKNVSFFERESTEY 297

Query: 117 Q 117
            
Sbjct: 298 S 298


>gi|139472853|ref|YP_001129417.1| ORF60 [Human herpesvirus 8]
 gi|1718316|gb|AAC57145.1| ORF 60 [Human herpesvirus 8 type M]
 gi|2246534|gb|AAB62659.1| ORF 60 [Human herpesvirus 8]
 gi|87196889|gb|ABD28915.1| ORF60 [Human herpesvirus 8]
 gi|261853541|gb|ACY00463.1| ORF60 [Human herpesvirus 8]
 gi|312275208|gb|ADQ57945.1| core gene UL40 family protein [Human herpesvirus 8]
          Length = 305

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 12/120 (10%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH      + N +      +  K    + + +  EA  +EI +       G   +N
Sbjct: 189 RDELLHTKAASMLYNTMV----EIQEKPSHAEVQALFREAVNIEIRFIQ-AKAAGVTLVN 243

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                ++++  A+R    I + P+F        P  +        K  NFFE   ++Y  
Sbjct: 244 VVDIRRFLEATADRILRDIFVPPIFGTPPPEACPLSYTGSF----KAVNFFERDNSDYTT 299


>gi|297622357|ref|YP_003703791.1| ribonucleotide reductase [Truepera radiovictrix DSM 17093]
 gi|297163537|gb|ADI13248.1| ribonucleotide reductase [Truepera radiovictrix DSM 17093]
          Length = 324

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 45/119 (37%), Gaps = 4/119 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGLNA 62
           E +H  FG  ++  ++ E P  +   F  + R    +A   E A        G    L  
Sbjct: 193 EQIHGMFGYKLVETLRRERPEWFGAAFSARLRAACVDAERAERAILRWICEAGALPFLPL 252

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
              E +MQ   N     +G  PL++       P  W  E +   K+ +FF  R T Y +
Sbjct: 253 AQLEAFMQARFNGALVALGEAPLWEVDPALLAPTRWFEEELLSSKQVDFFHKRPTAYAK 311


>gi|149392653|gb|ABR26129.1| ribonucleoside-diphosphate reductase small chain [Oryza sativa
           Indica Group]
          Length = 233

 Score = 64.7 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 27/58 (46%), Gaps = 7/58 (12%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
           RDE LH +F   + + ++        K  + + + ++ +A  +E  +  + +P   VG
Sbjct: 183 RDEGLHCDFACLLYDLLRG-------KLDESRVQEIVADAVDIEREFVCDALPVALVG 233


>gi|257125877|ref|YP_003163991.1| ribonucleoside-diphosphate reductase [Leptotrichia buccalis
           C-1013-b]
 gi|257049816|gb|ACV39000.1| Ribonucleoside-diphosphate reductase [Leptotrichia buccalis
           C-1013-b]
          Length = 335

 Score = 64.7 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 54/119 (45%), Gaps = 7/119 (5%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DES+H  F   +  ++          + + + + ++++    E  Y  E      +GL  
Sbjct: 199 DESIHGVFVGLLFQELYNSFSEEEKADMRAELKKLMYDLYENETRYTDEIYGD--LGLT- 255

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
            + ++Y+++ AN+    +G E  F+    NP   +   ++++  + +FF  + T Y++ 
Sbjct: 256 GNVKEYIRYNANKALMNLGFEEEFEVKNVNPI--VLNGLNVETTQHDFFSKKSTNYEKA 312


>gi|262038309|ref|ZP_06011695.1| ribonucleoside-diphosphate reductase, beta subunit [Leptotrichia
           goodfellowii F0264]
 gi|261747660|gb|EEY35113.1| ribonucleoside-diphosphate reductase, beta subunit [Leptotrichia
           goodfellowii F0264]
          Length = 334

 Score = 63.9 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 56/119 (47%), Gaps = 7/119 (5%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DES+H  F   +  +I         +  +++ + ++H+    E  Y  E      VGL A
Sbjct: 199 DESIHGVFVGLLSQEIYATFSEEEKESVRKELKELMHDLYENEARYTDEVYGD--VGLTA 256

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
              ++Y+++ AN+    +G E  F+  + NP   +   ++++  + +FF  + T Y++ 
Sbjct: 257 D-VKEYIRYNANKALMNLGFEEEFEVKDVNPI--VLNGLNVETTQHDFFSKKSTNYEKA 312


>gi|255656920|ref|ZP_05402329.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-23m63]
 gi|296452239|ref|ZP_06893946.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           difficile NAP08]
 gi|296877591|ref|ZP_06901622.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           difficile NAP07]
 gi|296258926|gb|EFH05814.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           difficile NAP08]
 gi|296431442|gb|EFH17258.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           difficile NAP07]
          Length = 323

 Score = 63.1 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 7/121 (5%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH  +   +  +I      +  +  ++K  ++L+     EI Y +    +  +  
Sbjct: 196 LRDESLHGKYIGLLAQEIYDSFDKMDKEILEEKMYSILYRLMENEIEYTNIIYRESGL-- 253

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
                  ++++ ANR    +G E L+     NP   +   +  + +  +FF T+   YQ+
Sbjct: 254 -EKEVVNFLKYNANRALENLGFEKLYTVDAINPI--VLNGLSTETKTHDFFSTKGNGYQK 310

Query: 119 G 119
           G
Sbjct: 311 G 311


>gi|254976540|ref|ZP_05273012.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-66c26]
 gi|255093925|ref|ZP_05323403.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile CIP 107932]
 gi|255315677|ref|ZP_05357260.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-76w55]
 gi|255518338|ref|ZP_05386014.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-97b34]
 gi|255651455|ref|ZP_05398357.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-37x79]
 gi|260684515|ref|YP_003215800.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium
           difficile CD196]
 gi|260688173|ref|YP_003219307.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium
           difficile R20291]
 gi|260210678|emb|CBA65434.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile CD196]
 gi|260214190|emb|CBE06438.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile R20291]
          Length = 323

 Score = 63.1 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 7/121 (5%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH  +   +  +I      +  K  ++K  ++L+     EI Y +    +  +  
Sbjct: 196 LRDESLHGKYIGLLAQEIYDSFDKMDKKMLEEKMYSILYSLMENEIEYTNVIYRESGL-- 253

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
                  ++++ ANR    +G E L+     NP   +   +  + +  +FF T+   YQ+
Sbjct: 254 -EKEVVNFLKYNANRALENLGFEKLYTVDAINPI--VLNGLSTETKTHDFFSTKGNGYQK 310

Query: 119 G 119
           G
Sbjct: 311 G 311


>gi|47213107|emb|CAF89527.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 369

 Score = 62.7 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 89  TENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122
            ENPF +M E I L+ + NFFE RV EYQ+   +
Sbjct: 323 AENPFDFM-ENISLEGKTNFFEKRVGEYQRMGVM 355


>gi|314121808|ref|YP_004063927.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           vB_EcoM-VR7]
 gi|313151565|gb|ADR32621.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           vB_EcoM-VR7]
          Length = 392

 Score = 62.7 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 7/107 (6%)

Query: 2   RDESLHLNFGIDVINQIKIE-NPHLWTK---EFQQKSRTMLHEATLLEIAYAHETMPK-G 56
           RDE LHL     ++ Q++   +   W K   E + ++  +  E    E  +A       G
Sbjct: 249 RDEQLHLKGTQYILRQLQTGVDGDEWVKIAHECEAEAAAIFMEVNRQEKEWAVHLFKDGG 308

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGL--EPLFKYTENPFPWMSEVID 101
             GL+     +++ ++   R  Q GL  E + + T++P PW+ E ++
Sbjct: 309 LPGLSVEILNRFIDYLTVSRMKQCGLPCEIVLESTKHPIPWIREYLN 355


>gi|308814593|ref|YP_003934867.1| ribonucleotide reductase B subunit [Shigella phage SP18]
 gi|308206185|gb|ADO19584.1| ribonucleotide reductase B subunit [Shigella phage SP18]
          Length = 392

 Score = 62.7 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 7/107 (6%)

Query: 2   RDESLHLNFGIDVINQIKIE-NPHLWTK---EFQQKSRTMLHEATLLEIAYAHETMPK-G 56
           RDE LHL     ++ Q++   +   W K   E + ++  +  E    E  +A       G
Sbjct: 249 RDEQLHLKGTQYILRQLQTGVDGDEWVKIAHECEAEAAAIFMEVNRQEKEWAVHLFKDGG 308

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGL--EPLFKYTENPFPWMSEVID 101
             GL+     +++ ++   R  Q GL  E + + T++P PW+ E ++
Sbjct: 309 LPGLSVEILNRFIDYLTVSRMKQCGLPCEIVLESTKHPIPWIREYLN 355


>gi|228926484|ref|ZP_04089556.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228833308|gb|EEM78873.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
          Length = 322

 Score = 62.7 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 11/127 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AYA E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYAEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP      +  L+ +    +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304

Query: 117 QQGAELK 123
            +   ++
Sbjct: 305 VKATNVE 311


>gi|126700615|ref|YP_001089512.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium
           difficile 630]
 gi|255102106|ref|ZP_05331083.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-63q42]
 gi|255307975|ref|ZP_05352146.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile ATCC 43255]
 gi|115252052|emb|CAJ69888.1| Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide
           reductase small subunit) [Clostridium difficile]
          Length = 323

 Score = 62.4 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 7/121 (5%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH  +   +  +I      +  +  ++K  ++L+     EI Y +    +  +  
Sbjct: 196 LRDESLHGKYIGLLAQEIYDSFDKMDKEMLEEKMYSILYSLMENEIEYTNVIYRESGL-- 253

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
                  ++++ ANR    +G E L+     NP   +   +  + +  +FF T+   YQ+
Sbjct: 254 -EKEVVNFLKYNANRALENLGFEKLYTVDAINPI--VLNGLSTETKTHDFFSTKGNGYQK 310

Query: 119 G 119
           G
Sbjct: 311 G 311


>gi|229160405|ref|ZP_04288403.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           R309803]
 gi|228623129|gb|EEK79957.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           R309803]
          Length = 322

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  Q+  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQLFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP      +  L+ +    +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304

Query: 117 QQGAELK 123
            +   ++
Sbjct: 305 VKATNVE 311


>gi|47566242|ref|ZP_00237270.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           G9241]
 gi|47556795|gb|EAL15126.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           G9241]
          Length = 322

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 14/132 (10%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP      +  L+ +    +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304

Query: 117 QQGA---ELKWD 125
            +     +L  D
Sbjct: 305 VKATNVEKLSDD 316


>gi|229095937|ref|ZP_04226913.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-29]
 gi|229114891|ref|ZP_04244304.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock1-3]
 gi|228668583|gb|EEL24012.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock1-3]
 gi|228687447|gb|EEL41349.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-29]
          Length = 322

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 14/132 (10%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  Q+  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQLFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP      +  L+ +    +FF  +   Y
Sbjct: 250 -VDDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304

Query: 117 QQGA---ELKWD 125
            +     +L  D
Sbjct: 305 VKATNVEKLSDD 316


>gi|52143985|ref|YP_082843.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           E33L]
 gi|228984529|ref|ZP_04144706.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|229155020|ref|ZP_04283134.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 4342]
 gi|51977454|gb|AAU19004.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           E33L]
 gi|157955324|gb|ABW06037.1| NrdF [Bacillus thuringiensis serovar tochigiensis]
 gi|228628578|gb|EEK85291.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 4342]
 gi|228775232|gb|EEM23621.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 322

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 14/132 (10%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP      +  L+ +    +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304

Query: 117 QQGA---ELKWD 125
            +     +L  D
Sbjct: 305 VKATNVEKLSDD 316


>gi|229029125|ref|ZP_04185222.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH1271]
 gi|228732183|gb|EEL83068.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH1271]
          Length = 322

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 19/131 (14%)

Query: 1   MRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
           +RDES+H  F       +  ++  E+     +E Q++++ +L E   +E+AY  E     
Sbjct: 192 IRDESIHGVFVGILAQQLFTELSAED----QQEVQKETQELLMELYEIEMAYTEEIYTS- 246

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETR 112
            +GL      +++++ AN+    +GLEP F+  E NP      +  L+ +    +FF  +
Sbjct: 247 -IGL-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVK 300

Query: 113 VTEYQQGAELK 123
              Y +   ++
Sbjct: 301 GNGYVKATNVE 311


>gi|30261453|ref|NP_843830.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Ames]
 gi|47526645|ref|YP_017994.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49184287|ref|YP_027539.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Sterne]
 gi|49477196|ref|YP_035577.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|65318723|ref|ZP_00391682.1| COG0208: Ribonucleotide reductase, beta subunit [Bacillus anthracis
           str. A2012]
 gi|118476922|ref|YP_894073.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis str. Al Hakam]
 gi|165870361|ref|ZP_02215016.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0488]
 gi|167634337|ref|ZP_02392658.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0442]
 gi|167639338|ref|ZP_02397610.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0193]
 gi|170686782|ref|ZP_02878002.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0465]
 gi|170706310|ref|ZP_02896771.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0389]
 gi|177651561|ref|ZP_02934350.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0174]
 gi|190568085|ref|ZP_03020995.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis Tsiankovskii-I]
 gi|196035278|ref|ZP_03102683.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           W]
 gi|196046555|ref|ZP_03113780.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           03BB108]
 gi|218902561|ref|YP_002450395.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           AH820]
 gi|225863317|ref|YP_002748695.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           03BB102]
 gi|227815798|ref|YP_002815807.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. CDC 684]
 gi|228914025|ref|ZP_04077647.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228932735|ref|ZP_04095607.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228945050|ref|ZP_04107411.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|229090407|ref|ZP_04221650.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-42]
 gi|229120993|ref|ZP_04250235.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           95/8201]
 gi|229183646|ref|ZP_04310869.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BGSC 6E1]
 gi|229602752|ref|YP_002865867.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0248]
 gi|254682483|ref|ZP_05146344.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. CNEVA-9066]
 gi|254726146|ref|ZP_05187928.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. A1055]
 gi|254733899|ref|ZP_05191613.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Western North America USA6153]
 gi|254740411|ref|ZP_05198102.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Kruger B]
 gi|254753802|ref|ZP_05205837.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Vollum]
 gi|254758897|ref|ZP_05210924.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Australia 94]
 gi|301052993|ref|YP_003791204.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis CI]
 gi|30255307|gb|AAP25316.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. Ames]
 gi|47501793|gb|AAT30469.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49178214|gb|AAT53590.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. Sterne]
 gi|49328752|gb|AAT59398.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|72414680|emb|CAG28950.1| ribonucleoside-diphosphate reductase class Ib beta chain [Bacillus
           anthracis]
 gi|118416147|gb|ABK84566.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Bacillus thuringiensis str. Al Hakam]
 gi|157955314|gb|ABW06029.1| NrdF [Bacillus thuringiensis serovar finitimus]
 gi|164713856|gb|EDR19378.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0488]
 gi|167512777|gb|EDR88151.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0193]
 gi|167530225|gb|EDR92951.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0442]
 gi|170128844|gb|EDS97710.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0389]
 gi|170669305|gb|EDT20048.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0465]
 gi|172082839|gb|EDT67902.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0174]
 gi|190560819|gb|EDV14794.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis Tsiankovskii-I]
 gi|195991955|gb|EDX55918.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           W]
 gi|196022739|gb|EDX61421.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           03BB108]
 gi|218537212|gb|ACK89610.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           AH820]
 gi|225785957|gb|ACO26174.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           03BB102]
 gi|227004217|gb|ACP13960.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. CDC 684]
 gi|228599889|gb|EEK57486.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BGSC 6E1]
 gi|228662653|gb|EEL18251.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           95/8201]
 gi|228692990|gb|EEL46708.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-42]
 gi|228814719|gb|EEM60979.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228826940|gb|EEM72702.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228845630|gb|EEM90659.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|229267160|gb|ACQ48797.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0248]
 gi|300375162|gb|ADK04066.1| ribonucleotide-diphosphate reductase beta subunit [Bacillus cereus
           biovar anthracis str. CI]
 gi|324325470|gb|ADY20730.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 322

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP      +  L+ +    +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304

Query: 117 QQGAELK 123
            +   ++
Sbjct: 305 VKATNVE 311


>gi|229189534|ref|ZP_04316550.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 10876]
 gi|228593979|gb|EEK51782.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 10876]
          Length = 322

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAKEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP      +  L+ +    +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304

Query: 117 QQGAELK 123
            +   ++
Sbjct: 305 VKATNVE 311


>gi|164688728|ref|ZP_02212756.1| hypothetical protein CLOBAR_02375 [Clostridium bartlettii DSM
           16795]
 gi|164602204|gb|EDQ95669.1| hypothetical protein CLOBAR_02375 [Clostridium bartlettii DSM
           16795]
          Length = 327

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 7/121 (5%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH  +   +  +I  +      KE++ K   +       EI Y +        GL
Sbjct: 196 LRDESLHGKYIGLLAQEIFKDFSKEEQKEYKSKVMDVFDRLMENEINYTNTIYEG--TGL 253

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
            A     ++++ ANR    +G +   +    NP   +   +  + +  +FF T+   YQ+
Sbjct: 254 -ADEVINFLKYNANRAMENLGYDNRLEVDPVNPI--VLNGLSTETKTHDFFSTKGNGYQK 310

Query: 119 G 119
           G
Sbjct: 311 G 311


>gi|42780545|ref|NP_977792.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           ATCC 10987]
 gi|42736465|gb|AAS40400.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           ATCC 10987]
          Length = 322

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP      +  L+ +    +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304

Query: 117 QQGAELK 123
            +   ++
Sbjct: 305 VKATNVE 311


>gi|157955319|gb|ABW06033.1| NrdF [Bacillus thuringiensis serovar pakistani]
          Length = 322

 Score = 61.6 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSTEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP      +  L+ +    +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304

Query: 117 QQGAELK 123
            +   ++
Sbjct: 305 VKATNVE 311


>gi|218233288|ref|YP_002366135.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           B4264]
 gi|229149653|ref|ZP_04277884.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           m1550]
 gi|157955328|gb|ABW06040.1| NrdF [Bacillus thuringiensis serovar entomocidus]
 gi|157955388|gb|ABW06085.1| NrdF [Bacillus thuringiensis serovar subtoxicus]
 gi|157955409|gb|ABW06101.1| NrdF [Bacillus cereus]
 gi|218161245|gb|ACK61237.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           B4264]
 gi|228633863|gb|EEK90461.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           m1550]
          Length = 322

 Score = 61.6 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQDLLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP      +  L+ +    +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304

Query: 117 QQGAELK 123
            +   ++
Sbjct: 305 VKATNVE 311


>gi|157955332|gb|ABW06043.1| NrdF [Bacillus thuringiensis serovar galleriae]
 gi|157955344|gb|ABW06052.1| NrdF [Bacillus thuringiensis serovar tolworthi]
          Length = 322

 Score = 61.6 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSVEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP      +  L+ +    +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304

Query: 117 QQGAELK 123
            +   ++
Sbjct: 305 VKATNVE 311


>gi|157955376|gb|ABW06076.1| NrdF [Bacillus thuringiensis serovar morrisoni]
          Length = 322

 Score = 61.6 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP      +  L+ +    +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304

Query: 117 QQGAELK 123
            +   ++
Sbjct: 305 VKATNVE 311


>gi|228938567|ref|ZP_04101175.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228971446|ref|ZP_04132072.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228978059|ref|ZP_04138438.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis Bt407]
 gi|157955340|gb|ABW06049.1| NrdF [Bacillus thuringiensis serovar thuringiensis]
 gi|157955368|gb|ABW06070.1| NrdF [Bacillus thuringiensis serovar galechiae]
 gi|157955384|gb|ABW06082.1| NrdF [Bacillus thuringiensis serovar sotto]
 gi|228781720|gb|EEM29919.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis Bt407]
 gi|228788313|gb|EEM36266.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228821165|gb|EEM67182.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|326939076|gb|AEA14972.1| ribonucleotide-diphosphate reductase [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 322

 Score = 61.6 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP      +  L+ +    +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304

Query: 117 QQGAELK 123
            +   ++
Sbjct: 305 VKATNVE 311


>gi|229177859|ref|ZP_04305232.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           172560W]
 gi|228605650|gb|EEK63098.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           172560W]
          Length = 322

 Score = 61.6 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP      +  L+ +    +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304

Query: 117 QQGAELK 123
            +   ++
Sbjct: 305 VKATNVE 311


>gi|228907084|ref|ZP_04070948.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 200]
 gi|157955401|gb|ABW06095.1| NrdF [Bacillus thuringiensis serovar toumanoffi]
 gi|228852588|gb|EEM97378.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 200]
          Length = 322

 Score = 61.6 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP      +  L+ +    +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304

Query: 117 QQGAELK 123
            +   ++
Sbjct: 305 VKATNVE 311


>gi|75759355|ref|ZP_00739452.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|218896385|ref|YP_002444796.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           G9842]
 gi|228900033|ref|ZP_04064269.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 4222]
 gi|228920164|ref|ZP_04083513.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228964415|ref|ZP_04125529.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|74493187|gb|EAO56306.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|157955348|gb|ABW06055.1| NrdF [Bacillus thuringiensis serovar alesti]
 gi|157955356|gb|ABW06061.1| NrdF [Bacillus thuringiensis serovar dakota]
 gi|157955360|gb|ABW06064.1| NrdF [Bacillus thuringiensis serovar darmstadiensis]
 gi|157955364|gb|ABW06067.1| NrdF [Bacillus thuringiensis serovar dendrolimus]
 gi|157955380|gb|ABW06079.1| NrdF [Bacillus thuringiensis serovar ostriniae]
 gi|218545942|gb|ACK98336.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           G9842]
 gi|228795272|gb|EEM42764.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228839620|gb|EEM84912.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228859647|gb|EEN04071.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 4222]
          Length = 322

 Score = 61.6 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP      +  L+ +    +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304

Query: 117 QQGAELK 123
            +   ++
Sbjct: 305 VKATNVE 311


>gi|157955305|gb|ABW06022.1| NrdF [Bacillus thuringiensis serovar aizawai]
 gi|157955352|gb|ABW06058.1| NrdF [Bacillus thuringiensis serovar colmeri]
 gi|157955372|gb|ABW06073.1| NrdF [Bacillus thuringiensis serovar indiana]
 gi|157955405|gb|ABW06098.1| NrdF [Bacillus thuringiensis serovar wuhanensis]
          Length = 322

 Score = 61.6 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSVEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP      +  L+ +    +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304

Query: 117 QQGAELK 123
            +   ++
Sbjct: 305 VKATNVE 311


>gi|30019505|ref|NP_831136.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           ATCC 14579]
 gi|229043194|ref|ZP_04190917.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH676]
 gi|229078637|ref|ZP_04211194.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock4-2]
 gi|229108909|ref|ZP_04238513.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock1-15]
 gi|229126769|ref|ZP_04255781.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-Cer4]
 gi|229144056|ref|ZP_04272472.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-ST24]
 gi|296502033|ref|YP_003663733.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis BMB171]
 gi|29895049|gb|AAP08337.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 14579]
 gi|157955310|gb|ABW06026.1| NrdF [Bacillus thuringiensis serovar canadensis]
 gi|157955392|gb|ABW06088.1| NrdF [Bacillus thuringiensis serovar thompsoni]
 gi|157955396|gb|ABW06091.1| NrdF [Bacillus thuringiensis serovar tohokuensis]
 gi|228639453|gb|EEK95867.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-ST24]
 gi|228656709|gb|EEL12535.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-Cer4]
 gi|228674565|gb|EEL29805.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock1-15]
 gi|228704707|gb|EEL57136.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock4-2]
 gi|228726156|gb|EEL77390.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH676]
 gi|296323085|gb|ADH06013.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis BMB171]
          Length = 322

 Score = 61.6 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP      +  L+ +    +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304

Query: 117 QQGAELK 123
            +   ++
Sbjct: 305 VKATNVE 311


>gi|157955336|gb|ABW06046.1| NrdF [Bacillus thuringiensis serovar kurstaki]
          Length = 322

 Score = 61.6 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 11/127 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E + +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSVEEQQEVQKETQELLMELSEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP      +  L+ +    +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304

Query: 117 QQGAELK 123
            +   ++
Sbjct: 305 VKATNVE 311


>gi|229084444|ref|ZP_04216723.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-44]
 gi|228698872|gb|EEL51578.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-44]
          Length = 322

 Score = 61.2 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 14/132 (10%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTDEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP      +  L+ +    +FF  +   Y
Sbjct: 250 -VEEVNRFVRYNANKGLMNLGLEPRFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304

Query: 117 QQGA---ELKWD 125
            +     +L  D
Sbjct: 305 VKATNVEKLSDD 316


>gi|156096873|ref|XP_001614470.1| ribonucleotide reductase small subunit [Plasmodium vivax SaI-1]
 gi|148803344|gb|EDL44743.1| ribonucleotide reductase small subunit, putative [Plasmodium vivax]
          Length = 335

 Score = 61.2 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 8/94 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F +   N       HL  K   +        A  LE  ++ E +    + + 
Sbjct: 215 RDEYLHGDFSVMCCN-------HLNNKLKYESLLDYFKMAVELEYQFSMEMLELSVLKIK 267

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 95
               + +++++A+     +     F  ++ PF W
Sbjct: 268 KEQVKSFLEYLADTMLVNLKHPKYFN-SKYPFTW 300


>gi|163939261|ref|YP_001644145.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           weihenstephanensis KBAB4]
 gi|229010750|ref|ZP_04167947.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           DSM 2048]
 gi|229132251|ref|ZP_04261107.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-ST196]
 gi|229166287|ref|ZP_04294046.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH621]
 gi|163861458|gb|ABY42517.1| Ribonucleoside-diphosphate reductase [Bacillus weihenstephanensis
           KBAB4]
 gi|228617232|gb|EEK74298.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH621]
 gi|228651189|gb|EEL07168.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-ST196]
 gi|228750424|gb|EEM00253.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           DSM 2048]
          Length = 322

 Score = 61.2 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 19/131 (14%)

Query: 1   MRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
           +RDES+H  F       +  ++  E      +E Q +++ +L E   +E+AY  E     
Sbjct: 192 IRDESIHGVFVGILAQQIFTELSAEE----QQEVQTETQELLMELYEIELAYTEEIYTS- 246

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETR 112
            +GL      +++++ AN+    +GLEP F+  E NP      +  L+ +    +FF  +
Sbjct: 247 -IGL-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVK 300

Query: 113 VTEYQQGAELK 123
              Y +   ++
Sbjct: 301 GNGYVKATNVE 311


>gi|228990454|ref|ZP_04150419.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           pseudomycoides DSM 12442]
 gi|228996556|ref|ZP_04156195.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           Rock3-17]
 gi|229004206|ref|ZP_04162007.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           Rock1-4]
 gi|228757067|gb|EEM06311.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           Rock1-4]
 gi|228763188|gb|EEM12096.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           Rock3-17]
 gi|228768980|gb|EEM17578.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           pseudomycoides DSM 12442]
          Length = 322

 Score = 60.8 bits (147), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 11/127 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAEFSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP      +  L+ +    +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPRFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304

Query: 117 QQGAELK 123
            +   ++
Sbjct: 305 VKATNVE 311


>gi|213420352|ref|ZP_03353418.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 88

 Score = 60.8 bits (147), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 5/81 (6%)

Query: 50  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKN 107
                 G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +  
Sbjct: 1   DYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVA 60

Query: 108 FFETRVTEY---QQGAELKWD 125
             E  V+ Y   Q  +E+  D
Sbjct: 61  PQEVEVSSYLVGQIDSEVDTD 81


>gi|147800139|emb|CAN68817.1| hypothetical protein VITISV_036653 [Vitis vinifera]
          Length = 924

 Score = 60.8 bits (147), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 3/61 (4%)

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122
               +Y  +  +     +  E  +   ENPF WM E I L+   NFF+ R+ +YQ+ + +
Sbjct: 731 EDLYKYQSYKWDX-TVALXYERKYN-VENPFDWM-EFISLQGNANFFQRRMGDYQKASIM 787

Query: 123 K 123
            
Sbjct: 788 S 788


>gi|152974880|ref|YP_001374397.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           subsp. cytotoxis NVH 391-98]
 gi|152023632|gb|ABS21402.1| Ribonucleoside-diphosphate reductase [Bacillus cytotoxicus NVH
           391-98]
          Length = 322

 Score = 60.8 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 14/132 (10%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      ++ Q++++ +L E   +E AY  E      +GL
Sbjct: 192 IRDESIHGVFVGLLAQQIFAELSAEEQEDVQKETQDLLMELYEIETAYTEEIY--ASIGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP      +  L+ +    +FF  +   Y
Sbjct: 250 -VGEVNRFVRYNANKGLMNLGLEPRFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304

Query: 117 QQGA---ELKWD 125
            +     +L  D
Sbjct: 305 VKATNVEKLSDD 316


>gi|229057079|ref|ZP_04196471.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH603]
 gi|228720220|gb|EEL71799.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH603]
          Length = 322

 Score = 60.8 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 11/127 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  QI  E      +E Q +++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFTELSAKEQQEVQTETQELLMELYEIELAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP      +  L+ +    +FF  +   Y
Sbjct: 250 -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304

Query: 117 QQGAELK 123
            +   ++
Sbjct: 305 VKATNVE 311


>gi|301331892|gb|ADK70922.1| U27.5 [Elephant endotheliotropic herpesvirus 2]
          Length = 301

 Score = 60.8 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 47/118 (39%), Gaps = 12/118 (10%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H      +   +    P    +       ++  +   +E  + +  +  G   +N
Sbjct: 185 RDESIHTTAATKLY--LNYVTPE--NRPSYSFIYSLFSDVIRIEKEFINAKV-DGVGLIN 239

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKNFFETRVTEY 116
                  ++ +A++   +I ++PL+        P P    +  ++K   FFE R TEY
Sbjct: 240 KKVIFDTLEGVADQLLARINMQPLYATQIPNNCPLP----LSTIEKNVCFFEKRNTEY 293


>gi|269123322|ref|YP_003305899.1| Ribonucleoside-diphosphate reductase [Streptobacillus moniliformis
           DSM 12112]
 gi|268314648|gb|ACZ01022.1| Ribonucleoside-diphosphate reductase [Streptobacillus moniliformis
           DSM 12112]
          Length = 333

 Score = 60.4 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 55/118 (46%), Gaps = 7/118 (5%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DES+H  F   +  +I  E   +  +  +++   + +E    E+ +  E      VGL +
Sbjct: 199 DESIHGVFVGKLAQEIFEEMSFVEKESVKKEIMNLFYELYENELKFTDEIYSD--VGLTS 256

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
              ++Y+++  N+    +G +  F+  E N    +   ++++  + +FF  + T Y++
Sbjct: 257 E-VKEYIRYNGNKALMNLGFKEEFEIKEVNAI--VLNGLNVETTQHDFFSKKSTNYEK 311


>gi|258597037|ref|XP_001347439.2| ribonucleotide reductase small subunit, putative [Plasmodium
           falciparum 3D7]
 gi|254922415|gb|AAN35352.2| ribonucleotide reductase small subunit, putative [Plasmodium
           falciparum 3D7]
          Length = 335

 Score = 60.4 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 8/94 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F +   N       HL  K   +        A  LE  ++ E +    + + 
Sbjct: 215 RDEYLHGDFSVMCCN-------HLVNKLKYEHVLDYFKMAVDLEYQFSLEMLELNVLKIK 267

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 95
                 +++++ +     +     +  ++ PF W
Sbjct: 268 KEQVRAFLEYLTDTMLTNLKYPKHYN-SKYPFSW 300


>gi|229102053|ref|ZP_04232765.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-28]
 gi|228681373|gb|EEL35538.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-28]
          Length = 322

 Score = 60.4 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 14/132 (10%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  Q+  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 192 IRDESIHGVFVGILAQQLFAELSAEDQQEVQKETQVLLMELYEIEMAYTEEIYTS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK---NFFETRVTEY 116
                 +++++ AN+    +GLEP F+  E NP      +  L+ +    +FF  +   Y
Sbjct: 250 -VDDVNRFVRYNANKGLMNLGLEPKFEEEEINPI----VLNGLRTDTKNHDFFSVKGNGY 304

Query: 117 QQGA---ELKWD 125
            +     +L  D
Sbjct: 305 VKATNVEKLSDD 316


>gi|50404173|gb|AAT76849.1| ribonucleotide reductase small subunit [Plasmodium falciparum]
          Length = 324

 Score = 60.4 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 8/94 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F +   N       HL  K   +        A  LE  ++ E +    + + 
Sbjct: 204 RDEYLHGDFSVMCCN-------HLVNKLKYEHVLDYFKMAVDLEYQFSLEMLELNVLKIK 256

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 95
                 +++++ +     +     +  ++ PF W
Sbjct: 257 KEQVRAFLEYLTDTMLTNLKYPKHYN-SKYPFSW 289


>gi|221055321|ref|XP_002258799.1| Ribonucleotide reductase small subunit [Plasmodium knowlesi strain
           H]
 gi|193808869|emb|CAQ39572.1| Ribonucleotide reductase small subunit,putative [Plasmodium
           knowlesi strain H]
          Length = 335

 Score = 60.0 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 8/94 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F +   N       HL  K   ++       A  LE  +A E +    + + 
Sbjct: 215 RDEYLHGDFSVMCCN-------HLNNKLKYERLLDYFKMAVKLEYQFAIEMLDLSVLKIK 267

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 95
               + +++++A+     +     F  ++ PF W
Sbjct: 268 KEQVKSFLEYLADTMLVNLKHPKYFN-SKYPFTW 300


>gi|296086890|emb|CBI33063.3| unnamed protein product [Vitis vinifera]
          Length = 75

 Score = 60.0 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL 102
           +NA    QY++F+A+     IG E  +   ENPF WM E I L
Sbjct: 1   MNATLMSQYIKFVADHLLVAIGYERKYN-VENPFDWM-EFISL 41


>gi|213855386|ref|ZP_03383626.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. M223]
          Length = 80

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 4/73 (5%)

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 115
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 1   MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 60

Query: 116 Y---QQGAELKWD 125
           Y   Q  +E+  D
Sbjct: 61  YLVGQIDSEVDTD 73


>gi|326483608|gb|EGE07618.1| hypothetical protein TEQG_06532 [Trichophyton equinum CBS 127.97]
          Length = 317

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 22/53 (41%), Gaps = 7/53 (13%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP 54
           RDE LH +F   + +       HL  +        ++ EA  +E  +  + +P
Sbjct: 272 RDEGLHTDFACLLFS-------HLNYRPDPNAVEAIITEAVTIEQEFLTDALP 317


>gi|320450283|ref|YP_004202379.1| ribonucleoside-diphosphate reductase subunit beta [Thermus
           scotoductus SA-01]
 gi|320150452|gb|ADW21830.1| ribonucleoside-diphosphate reductase, subunit beta [Thermus
           scotoductus SA-01]
          Length = 323

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 48/123 (39%), Gaps = 12/123 (9%)

Query: 4   ESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLH-EATLLEIAYAHETMPKGFV 58
           E+LH  FG++++  ++ E P L    +T+E   +       E  LLE  +A         
Sbjct: 194 ENLHGLFGVELLRILREERPDLFGPSFTEEALDRVEAFFRTEEALLEWIFAR----GDTE 249

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTE 115
            +      +++++  N+     GL   F   +       W    +   KE +FF  R   
Sbjct: 250 AVRGEEVLEFLKWRYNQVLALHGLPAPFPVRKECLRDTEWFDLELLADKEVDFFNKRSVA 309

Query: 116 YQQ 118
           Y +
Sbjct: 310 YAR 312


>gi|332672470|ref|YP_004421714.1| Ribonucleotide reductase, small subunit [Campylobacter phage
           NCTC12673]
 gi|327493647|gb|AEA86506.1| Ribonucleotide reductase, small subunit [Campylobacter phage
           NCTC12673]
          Length = 378

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 42/93 (45%), Gaps = 5/93 (5%)

Query: 3   DESLHLNFGIDVINQIKIENP----HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-F 57
           DE +HL     ++  ++ E      HL+     +K+R +  +    E+ +A   +  G  
Sbjct: 222 DEDIHLVIFSFILKTLRSEQHQGFSHLFDDSLSRKARKIAKKVYQDELEWAKYLLSMGPI 281

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90
            GL   + + +++F  + R  + G +P++   +
Sbjct: 282 PGLTIENIDGFLKFFVDDRLKKCGFQPIWNAPK 314


>gi|311068263|ref|YP_003973186.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           atrophaeus 1942]
 gi|310868780|gb|ADP32255.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           atrophaeus 1942]
          Length = 328

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 60/129 (46%), Gaps = 9/129 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +   +  +I  + P     E ++ S  +L +    E+ Y  +      VGL
Sbjct: 195 LRDEAIHGVYIGLLAQEIYNKQPEEKKAELREFSIELLEQLYENELEYTEDLY--DQVGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
           +    ++++++ AN+    +G +  F+  E NP   +   ++ K +  +FF  +   Y++
Sbjct: 253 S-HDVKKFIRYNANKALMNLGFDSYFEEEEINPI--VLNGLNTKTKSHDFFSMKGNGYKK 309

Query: 119 GAE--LKWD 125
                +K D
Sbjct: 310 ATVEPIKDD 318


>gi|328912184|gb|AEB63780.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus
           amyloliquefaciens LL3]
          Length = 305

 Score = 58.1 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 55/123 (44%), Gaps = 7/123 (5%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE+LH  +   +  +I  +   +  KE  + +  +L +    E+ Y  +      VGL
Sbjct: 176 IRDEALHGVYTGLLAQEIYSKQTEIKKKELYKWTIDLLLDLYENELDYTTDLY--DPVGL 233

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
                ++++++ AN+  + +G +  F   E NP   +   +  K +  +FF  +   Y++
Sbjct: 234 T-HDVKKFIRYNANKALNNLGFDHYFHEEEINPV--VLNGLSTKTKSMDFFSQKGNSYRK 290

Query: 119 GAE 121
              
Sbjct: 291 ATA 293


>gi|299537049|ref|ZP_07050352.1| ribonucleoside-diphosphate reductase subunit beta [Lysinibacillus
           fusiformis ZC1]
 gi|298727290|gb|EFI67862.1| ribonucleoside-diphosphate reductase subunit beta [Lysinibacillus
           fusiformis ZC1]
          Length = 322

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 50/124 (40%), Gaps = 13/124 (10%)

Query: 1   MRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
           +RDES+H      F  ++  Q   E      +E       +L +    E+ Y  +   + 
Sbjct: 193 LRDESIHGVAVGFFAQNLFKQFSKE----KQEELHLWGYELLLDLYQNEMKYTDDIYAE- 247

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTE 115
             GL+      Y+++ AN+    +G E +F   E NP   M+ + +     +FF  +   
Sbjct: 248 -TGLSPE-VRAYVRYNANKALMNVGFEAMFPEEEVNPIV-MNGIRNEGSTYDFFSQKGAT 304

Query: 116 YQQG 119
           Y + 
Sbjct: 305 YAKA 308


>gi|325989612|ref|YP_004249311.1| ribonucleoside-diphosphate reductase beta chain [Mycoplasma suis
           KI3806]
 gi|323574697|emb|CBZ40353.1| Ribonucleoside-diphosphate reductase beta chain [Mycoplasma suis]
          Length = 330

 Score = 57.7 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 56/127 (44%), Gaps = 9/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVG 59
           +RDE++H  +  ++ +++         ++ +++  ++L E    EI Y  +   P   VG
Sbjct: 200 IRDEAIHGLYIGNLASKLFSTFDSEKQEKLKKQVYSLLEELMENEIEYTEKIYSPINLVG 259

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEY 116
                  Q++++ AN+    + LE  +  TE   NP  +       K   +FF T+   Y
Sbjct: 260 ----EVIQFLKYNANKALQNLDLEEKYDVTENDINPMIFNGLNTSTKNH-DFFSTKGNGY 314

Query: 117 QQGAELK 123
            +   ++
Sbjct: 315 IKTTHVE 321


>gi|16078802|ref|NP_389621.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221309618|ref|ZP_03591465.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221313941|ref|ZP_03595746.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. NCIB 3610]
 gi|221318864|ref|ZP_03600158.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. JH642]
 gi|221323136|ref|ZP_03604430.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. SMY]
 gi|321315508|ref|YP_004207795.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis BSn5]
 gi|1710395|sp|P50621|RIR2_BACSU RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|1154633|emb|CAA92811.1| NrdF [Bacillus subtilis subsp. subtilis str. 168]
 gi|2634123|emb|CAB13623.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|116733911|gb|ABK20014.1| ribonucleotide-diphosphate reductase beta [synthetic construct]
 gi|291484287|dbj|BAI85362.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. natto BEST195]
 gi|320021782|gb|ADV96768.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis BSn5]
          Length = 329

 Score = 57.7 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 61/129 (47%), Gaps = 9/129 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +   +  +I  +       E ++ +  +L++    E+ Y  +      VGL
Sbjct: 195 LRDEAIHGVYVGLLAQEIYNKQTEEKKAELREFAIDLLNQLYENELEYTEDLY--DQVGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
           +    ++++++ AN+    +G +P F+  + NP   +   ++ K +  +FF  +   Y++
Sbjct: 253 S-HDVKKFIRYNANKALMNLGFDPYFEEEDINPI--VLNGLNTKTKSHDFFSMKGNGYKK 309

Query: 119 GAE--LKWD 125
                LK D
Sbjct: 310 ATVEPLKDD 318


>gi|327440528|dbj|BAK16893.1| ribonucleotide reductase, beta subunit [Solibacillus silvestris
           StLB046]
          Length = 320

 Score = 57.7 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 15/132 (11%)

Query: 1   MRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
           +RDES+H      F  ++      E      +E        L +    E+ Y  +   + 
Sbjct: 193 LRDESIHGVAVGFFAQNIFKTFTEE----KQQELTLWGYEYLLDLYQNEMKYTDDLYAE- 247

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTE 115
             GL+    ++Y+++ AN+    +GL+ +F   E NP   M+ + +     +FF  + + 
Sbjct: 248 -TGLSPE-VKKYVRYNANKALMNLGLDTMFPDEEVNPVV-MNGISNTGSTYDFFSQKGST 304

Query: 116 Y--QQGAELKWD 125
           Y   + A +  D
Sbjct: 305 YAVAKVAPITDD 316


>gi|325973169|ref|YP_004250233.1| ribonucleoside-diphosphate reductase subunit beta [Mycoplasma suis
           str. Illinois]
 gi|323651771|gb|ADX97853.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma suis
           str. Illinois]
          Length = 330

 Score = 57.7 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 56/127 (44%), Gaps = 9/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVG 59
           +RDE++H  +  ++ +++         ++ +++  ++L E    EI Y  +   P   VG
Sbjct: 200 IRDEAIHGLYIGNLASKLFSTFDSEKQEKLKKQVYSLLEELMENEIEYTEKVYSPINLVG 259

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEY 116
                  Q++++ AN+    + LE  +  TE   NP  +       K   +FF T+   Y
Sbjct: 260 ----EVIQFLKYNANKALQNLDLEEKYDVTENDINPMIFNGLNTSTKNH-DFFSTKGNGY 314

Query: 117 QQGAELK 123
            +   ++
Sbjct: 315 IKTTHVE 321


>gi|169827410|ref|YP_001697568.1| ribonucleoside-diphosphate reductase subunit beta [Lysinibacillus
           sphaericus C3-41]
 gi|168991898|gb|ACA39438.1| Ribonucleoside-diphosphate reductase subunit beta [Lysinibacillus
           sphaericus C3-41]
          Length = 318

 Score = 57.7 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 13/124 (10%)

Query: 1   MRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
           +RDES+H      F  ++  Q   E      +  Q     +L +    E+ Y  +   + 
Sbjct: 189 LRDESIHGVAVGFFAQNLYKQFSKE----KQEALQLWGYELLLDLYQNEMKYTEDIYAE- 243

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTE 115
             GL+    + Y+++ AN+    +G E +F   E NP   M+ + +     +FF  +   
Sbjct: 244 -TGLSPE-VKAYVRYNANKALMNVGFEAMFPEEEVNPIV-MNGIRNEGSTYDFFSQKGAT 300

Query: 116 YQQG 119
           Y + 
Sbjct: 301 YAKA 304


>gi|294669616|ref|ZP_06734683.1| hypothetical protein NEIELOOT_01517 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308529|gb|EFE49772.1| hypothetical protein NEIELOOT_01517 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 81

 Score = 57.7 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 101
            +GLN     QY+++I N R   +GL   F+  T+NP PW++  + 
Sbjct: 1   MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLS 46


>gi|126650012|ref|ZP_01722245.1| ribonucleotide-diphosphate [Bacillus sp. B14905]
 gi|126593184|gb|EAZ87146.1| ribonucleotide-diphosphate [Bacillus sp. B14905]
          Length = 322

 Score = 57.7 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 13/124 (10%)

Query: 1   MRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
           +RDES+H      F  ++  Q   E      +  Q     +L +    E+ Y  +   + 
Sbjct: 193 LRDESIHGVAVGFFAQNLYKQFSKE----KQESLQLWGYELLLDLYQNEMKYTEDIYAE- 247

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTE 115
             GL+    + Y+++ AN+    +G E +F   E NP   M+ + +     +FF  +   
Sbjct: 248 -TGLSPE-VKAYVRYNANKALMNVGFEAMFPEEEVNPIV-MNGIRNEGSTYDFFSQKGAT 304

Query: 116 YQQG 119
           Y + 
Sbjct: 305 YAKA 308


>gi|269121363|ref|YP_003309540.1| ribonucleoside-diphosphate reductase [Sebaldella termitidis ATCC
           33386]
 gi|268615241|gb|ACZ09609.1| Ribonucleoside-diphosphate reductase [Sebaldella termitidis ATCC
           33386]
          Length = 331

 Score = 57.7 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 59/123 (47%), Gaps = 15/123 (12%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKS----RTMLHEATLLEIAYAHETMPKGFV 58
           DES+H  F    +  +  E    +T E QQ+     + +++     E+ Y  E   +  +
Sbjct: 197 DESIHGVF----VGLLAQEFFKKFTPEDQQRIEKNLKELMYVLYENELKYTDEVYTE--I 250

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEY 116
           GL+    ++Y+++ AN+    +G +  F+  E NP   +   ++++  + +FF  + T Y
Sbjct: 251 GLSGD-VKEYIRYNANKALMNLGFDEEFEVKEVNPI--VLNGLNVETTQHDFFSKKSTNY 307

Query: 117 QQG 119
           ++ 
Sbjct: 308 EKA 310


>gi|308172806|ref|YP_003919511.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           amyloliquefaciens DSM 7]
 gi|307605670|emb|CBI42041.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           amyloliquefaciens DSM 7]
          Length = 327

 Score = 57.4 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 53/125 (42%), Gaps = 11/125 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +   +  +I  +       E +  +  +L E    E+AY  +      VGL
Sbjct: 198 IRDEAIHGVYVGLLAQEIYGKQDPDVQLEMRDFAVELLTELYDNEVAYTEDLY--DAVGL 255

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK---NFFETRVTEY 116
                ++++++ AN+    +G +P F +   NP      +  L  +    +FF  +   Y
Sbjct: 256 T-HDVKRFLRYNANKALQNLGFDPYFEEERPNPI----VMNGLNTKTKSHDFFSQKGNGY 310

Query: 117 QQGAE 121
           ++   
Sbjct: 311 KKATV 315


>gi|70946075|ref|XP_742789.1| ribonucleotide reductase small subunit [Plasmodium chabaudi
           chabaudi]
 gi|56521965|emb|CAH76799.1| ribonucleotide reductase small subunit, putative [Plasmodium
           chabaudi chabaudi]
          Length = 211

 Score = 57.4 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 36/94 (38%), Gaps = 8/94 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE L  +F +   N       HL  K   +        A  LE  +  E +    + + 
Sbjct: 91  RDEYLQGDFSVMCCN-------HLNNKLKYENVLDYFKTAVDLEYNFCVEMLDFDSLKIT 143

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 95
               +Q++Q++A+     +     +  ++ PF W
Sbjct: 144 KDQVKQFLQYLADTMLVNLKYSKHYN-SKYPFTW 176


>gi|296330954|ref|ZP_06873429.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305674472|ref|YP_003866144.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. spizizenii str. W23]
 gi|296151959|gb|EFG92833.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305412716|gb|ADM37835.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. spizizenii str. W23]
          Length = 329

 Score = 57.4 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 60/129 (46%), Gaps = 9/129 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +   +  +I  +       E +  +  +L+E    E+ Y  +      VGL
Sbjct: 195 LRDEAIHGVYVGLLAQEIYNKQTEEKKAELRGFAIDLLNELYENELEYTEDLY--DQVGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
           +    ++++++ AN+    +G +P F+  + NP   +   ++ K +  +FF  +   Y++
Sbjct: 253 S-HDVKKFIRYNANKALMNLGFDPYFEEEDINPI--VLNGLNTKTKSHDFFSMKGNGYKK 309

Query: 119 GAE--LKWD 125
                LK D
Sbjct: 310 ATVEPLKDD 318


>gi|52080345|ref|YP_079136.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           licheniformis ATCC 14580]
 gi|52785724|ref|YP_091553.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           licheniformis ATCC 14580]
 gi|319645870|ref|ZP_08000100.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus sp.
           BT1B_CT2]
 gi|52003556|gb|AAU23498.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus
           licheniformis ATCC 14580]
 gi|52348226|gb|AAU40860.1| NrdF [Bacillus licheniformis ATCC 14580]
 gi|317391620|gb|EFV72417.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus sp.
           BT1B_CT2]
          Length = 325

 Score = 57.4 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 15/127 (11%)

Query: 1   MRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
           +RDE++H         ++ NQ   E       E    S  +L E    E+ Y  +     
Sbjct: 195 LRDEAIHGVYVGLLAQEIYNQQTPEKKE----ELYAFSIDLLKELYENELEYTEDLY--D 248

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVT 114
            VGL+    ++++++ AN+    +G E  F+  E NP   +   ++ K +  +FF  +  
Sbjct: 249 QVGLS-HDVKKFIRYNANKALMNLGFEAYFEEEEINPI--VLNGLNTKTKSHDFFSMKGN 305

Query: 115 EYQQGAE 121
            Y++   
Sbjct: 306 GYKKATV 312


>gi|251797995|ref|YP_003012726.1| ribonucleotide-diphosphate reductase subunit beta [Paenibacillus
           sp. JDR-2]
 gi|247545621|gb|ACT02640.1| Ribonucleoside-diphosphate reductase [Paenibacillus sp. JDR-2]
          Length = 318

 Score = 57.0 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 51/123 (41%), Gaps = 13/123 (10%)

Query: 1   MRDESLHL----NFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
           +RDES+H         ++ NQ   E       + +++   +L+     E+ Y        
Sbjct: 188 LRDESIHGLYVGVLAQELFNQFTPEE----QAQLKEEVFALLNTLYENEVVYTDNLY--S 241

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTE 115
            +GL     + Y+++ AN+    +G EP F     NP  + + +    K+ +FF  +   
Sbjct: 242 PIGL-QEDVKAYVRYNANKALMNLGFEPYFPEEPVNPIVF-NGISTHTKQHDFFSKKGNG 299

Query: 116 YQQ 118
           Y +
Sbjct: 300 YVR 302


>gi|229172094|ref|ZP_04299659.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           MM3]
 gi|228611437|gb|EEK68694.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           MM3]
          Length = 133

 Score = 57.0 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 5/124 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DES+H  F   +  Q+ +E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 3   VKDESIHGVFVGILAQQLFVELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 60

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                 +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  +   Y + 
Sbjct: 61  -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 118

Query: 120 AELK 123
             ++
Sbjct: 119 TNVE 122


>gi|82793227|ref|XP_727957.1| ribonucleotide reductase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23484058|gb|EAA19522.1| ribonucleotide reductase, putative [Plasmodium yoelii yoelii]
          Length = 373

 Score = 57.0 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 8/94 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE L  +F +   N       HL  K   +        A  LE  +  + +   F+ + 
Sbjct: 215 RDEYLQGDFSVMCCN-------HLNNKLRYENVLNYFKAAVELEYNFCVDMLDFDFLKIT 267

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 95
               +Q++Q++A+     +     +  ++ PF W
Sbjct: 268 KDQVKQFLQYLADTMLLNLKYPKHYN-SKYPFAW 300


>gi|196040733|ref|ZP_03108032.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           NVH0597-99]
 gi|206977638|ref|ZP_03238531.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           H3081.97]
 gi|217958931|ref|YP_002337479.1| ribonucleoside-diphosphate reductase, subunit beta [Bacillus cereus
           AH187]
 gi|222095088|ref|YP_002529148.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           Q1]
 gi|229138142|ref|ZP_04266740.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           BDRD-ST26]
 gi|229195652|ref|ZP_04322418.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           m1293]
 gi|196028523|gb|EDX67131.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           NVH0597-99]
 gi|206744211|gb|EDZ55625.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           H3081.97]
 gi|217064629|gb|ACJ78879.1| ribonucleoside-diphosphate reductase, subunit beta [Bacillus cereus
           AH187]
 gi|221239146|gb|ACM11856.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           Q1]
 gi|228587901|gb|EEK45953.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           m1293]
 gi|228645487|gb|EEL01721.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           BDRD-ST26]
          Length = 133

 Score = 56.6 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 5/124 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 3   VKDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 60

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                 +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  +   Y + 
Sbjct: 61  -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 118

Query: 120 AELK 123
             ++
Sbjct: 119 TNVE 122


>gi|317495971|ref|ZP_07954333.1| ribonucleotide reductase [Gemella moribillum M424]
 gi|316913875|gb|EFV35359.1| ribonucleotide reductase [Gemella moribillum M424]
          Length = 322

 Score = 56.6 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 49/123 (39%), Gaps = 15/123 (12%)

Query: 3   DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
           DE++H +F      ++   +  E      KE      T+L +    E+ Y  +   +  +
Sbjct: 195 DETIHGSFTGFDAQEIFKTLTPEEQEKANKEM----YTLLLDLYENELKYTKDIYGE--I 248

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEY 116
           GL     + Y+++ ANR    +G    F+  E NP   +   ++   +  +FF  +   Y
Sbjct: 249 GL-FEEVKDYVEYNANRALANLGYPGYFEDKEINPI--IENAMNTSTKNHDFFSVKGDGY 305

Query: 117 QQG 119
              
Sbjct: 306 VVS 308


>gi|154686152|ref|YP_001421313.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           amyloliquefaciens FZB42]
 gi|154352003|gb|ABS74082.1| NrdF [Bacillus amyloliquefaciens FZB42]
          Length = 329

 Score = 56.6 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 58/123 (47%), Gaps = 7/123 (5%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +   +  +I  +       E ++ +  +L++    E+ Y  +      VGL
Sbjct: 195 LRDEAIHGVYVGLLAQEIYNKQTEEKKAELREFAIDLLNQLYENELEYTEDLY--DQVGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
           +    ++++++ AN+    +G +P F+  + NP   +   ++ K +  +FF  +   Y++
Sbjct: 253 S-HDVKKFIRYNANKALMNLGFDPYFEEEDINPI--VLNGLNTKTKSHDFFSMKGNGYKK 309

Query: 119 GAE 121
              
Sbjct: 310 ATV 312


>gi|219681363|ref|YP_002456127.1| putative ribonucleoside diphosphate reductase beta chain [Erwinia
           phage phiEa21-4]
 gi|327198492|ref|YP_004327080.1| ribonucleoside diphosphate reductase beta chain [Erwinia phage
           phiEa104]
 gi|199580630|gb|ACH89017.1| putative ribonucleoside diphosphate reductase beta chain [Erwinia
           phage phiEa21-4]
 gi|311875188|emb|CBX44448.1| ribonucleoside diphosphate reductase beta chain [Erwinia phage
           phiEa104]
          Length = 365

 Score = 56.6 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 56/131 (42%), Gaps = 11/131 (8%)

Query: 3   DESLH--LNFGIDVINQIKIENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETM--PKG 56
           DE LH  ++F       I +++P  +   +  +   + +L E    E  +A       + 
Sbjct: 229 DEILHSKMDFAAL---DILLKDPVWFQSYQNCKGDVQRILDEVMENESNWADYIFSEGRS 285

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
            VGLN    ++++ + A      + L+  +    +NP P+M + +++  ++N   E   +
Sbjct: 286 VVGLNPTLLKEWVYYSAKPLYDFLNLDYNYPVVVKNPLPYMDKWMNIDSQQNANQEQDNS 345

Query: 115 EYQQGAELKWD 125
           +Y     +  D
Sbjct: 346 QYLLNTMVNDD 356


>gi|46401830|ref|YP_006922.1| putative aerobic ribonucleoside diphosphate reductase, small
           subunit [Enterobacteria phage T5]
 gi|45775008|gb|AAS77140.1| putative aerobic ribonucleoside diphosphate reductase, small
           subunit [Enterobacteria phage T5]
 gi|51512032|gb|AAU05231.1| ribonucleotide reductase beta subunit [Enterobacteria phage T5]
 gi|59897231|gb|AAX12026.1| ribonucleoside diphosphate reductase I beta chain [Enterobacteria
           phage T5]
          Length = 381

 Score = 56.6 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 4/104 (3%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVGLN 61
           DE+LH      +I  +  +       E   K+   L +    EI + H     +  +GLN
Sbjct: 238 DEALHTQMSKAIIQIMFQQFDKDLVDEAVAKAPAQLLKTLKTEIEWGHFIFKGRSLIGLN 297

Query: 62  APSCEQYMQFIANRRCHQIGLE---PLFKYTENPFPWMSEVIDL 102
           A   E+Y+ F+       IG+E    L   T+NP PW+   +D 
Sbjct: 298 AELLEEYLYFVGRNAFMHIGVEWPSHLPVITKNPIPWIMNWLDT 341


>gi|308173699|ref|YP_003920404.1| ribonucleoside-diphosphate reductase minor subunit [Bacillus
           amyloliquefaciens DSM 7]
 gi|307606563|emb|CBI42934.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus
           amyloliquefaciens DSM 7]
 gi|328553367|gb|AEB23859.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           amyloliquefaciens TA208]
 gi|328911843|gb|AEB63439.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus
           amyloliquefaciens LL3]
          Length = 329

 Score = 56.6 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 57/123 (46%), Gaps = 7/123 (5%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +   +  +I  +       E ++ +  +L E    E+ Y  +      VGL
Sbjct: 195 LRDEAIHGVYVGLLAQEIYNKQTEAKKAELREFAIELLEELYHNELEYTEDLY--DQVGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
           +    ++++++ AN+    +G +P F+  + NP   +   ++ K +  +FF  +   Y++
Sbjct: 253 S-HDVKKFIRYNANKALMNLGFDPYFEEEDINPI--VLNGLNTKTKSHDFFSMKGNGYKK 309

Query: 119 GAE 121
              
Sbjct: 310 ATV 312


>gi|228957728|ref|ZP_04119472.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|228801971|gb|EEM48844.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus
           thuringiensis serovar pakistani str. T13001]
          Length = 133

 Score = 56.6 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 5/124 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 3   VKDESIHGVFVGILAQQIFAELSTEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 60

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                 +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  +   Y + 
Sbjct: 61  -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 118

Query: 120 AELK 123
             ++
Sbjct: 119 TNVE 122


>gi|149277655|ref|ZP_01883795.1| ribonucleotide-diphosphate [Pedobacter sp. BAL39]
 gi|149231343|gb|EDM36722.1| ribonucleotide-diphosphate [Pedobacter sp. BAL39]
          Length = 327

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 17/123 (13%)

Query: 3   DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
           DES+H  F      DV  ++   NP     + + K   +L E    E+ Y  E   +  V
Sbjct: 197 DESIHGVFVGLLAQDVYKKLP--NPE----KCKAKLEALLMELYENELKYTDELYTE--V 248

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEY 116
           GL A   ++Y+++ AN+    +G E LF+    N    +   ++++  + +FF  + T Y
Sbjct: 249 GLTAE-VKEYVRYNANKAMMNLGFEELFEVKPINAI--VLNGLNVETTQHDFFSKKSTNY 305

Query: 117 QQG 119
           ++ 
Sbjct: 306 EKS 308


>gi|307244651|ref|ZP_07526755.1| ribonucleoside-diphosphate reductase, beta subunit
           [Peptostreptococcus stomatis DSM 17678]
 gi|306492032|gb|EFM64081.1| ribonucleoside-diphosphate reductase, beta subunit
           [Peptostreptococcus stomatis DSM 17678]
          Length = 328

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 7/121 (5%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH  +   +  +   E  +    E ++K  ++L E    E  Y         +  
Sbjct: 201 LRDESLHGKYIGLLAQEKFNEFHYDDKNELKEKVYSLLKELMENEEKYTKLLYEGSGL-- 258

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
                  ++++ AN     +G E  +K    N    +   +  + +  +FF T+   YQ+
Sbjct: 259 -EEQVINFLKYNANTALTNMGFEEFYKVEPVNAI--VLNGLSTETKTHDFFSTKGNGYQK 315

Query: 119 G 119
           G
Sbjct: 316 G 316


>gi|206968346|ref|ZP_03229302.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           AH1134]
 gi|228951834|ref|ZP_04113932.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|229069005|ref|ZP_04202298.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           F65185]
 gi|206737266|gb|EDZ54413.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           AH1134]
 gi|228714117|gb|EEL65999.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           F65185]
 gi|228807757|gb|EEM54278.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
          Length = 133

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 5/124 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 3   VKDESIHGVFVGILAQQIFAELSVEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 60

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                 +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  +   Y + 
Sbjct: 61  -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 118

Query: 120 AELK 123
             ++
Sbjct: 119 TNVE 122


>gi|56964873|ref|YP_176604.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus clausii
           KSM-K16]
 gi|56911116|dbj|BAD65643.1| ribonucleoside-diphosphate reductase beta chain [Bacillus clausii
           KSM-K16]
          Length = 334

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 57/123 (46%), Gaps = 7/123 (5%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +   +  +I  +      KE  Q +  +L E    E+ Y  +      VGL
Sbjct: 195 LRDEAIHGVYIGLLAQEIYNKQSPDTQKELHQFAIELLDELYKNELLYTEDLY--DQVGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
           +    ++++++ AN+    +G +P F+  + NP   +   ++ K +  +FF  +   Y++
Sbjct: 253 S-HDVKKFIRYNANKALMNLGFDPYFEDEDINPI--VLNGLNTKTKSHDFFSMKGNGYKK 309

Query: 119 GAE 121
              
Sbjct: 310 ATV 312


>gi|329767978|ref|ZP_08259489.1| ribonucleoside-diphosphate reductase [Gemella haemolysans M341]
 gi|328838463|gb|EGF88071.1| ribonucleoside-diphosphate reductase [Gemella haemolysans M341]
          Length = 322

 Score = 56.2 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 15/123 (12%)

Query: 3   DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
           DE++H +F      ++   +  E      KE       +L +    E+ Y  +      +
Sbjct: 195 DETIHGSFTGFDAQELFKTLTPEEQERAEKEM----YKLLLDLYENELKYTKDIY--DEI 248

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEY 116
           GL     + Y+++ ANR    +G    F+  E NP   +   ++   +  +FF  +   Y
Sbjct: 249 GL-YEDVKDYVEYNANRALANLGYPGYFEDKEINPI--IENAMNTNTKNHDFFSVKGDGY 305

Query: 117 QQG 119
              
Sbjct: 306 VVS 308


>gi|9630287|ref|NP_046714.1| hypothetical protein SPBc2p162 [Bacillus phage SPBc2]
 gi|50812253|ref|NP_389886.2| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|75090792|sp|O64174|BNRDF_BPSPC RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|81637506|sp|O30601|YOSP_BACSU RecName: Full=SPBc2 prophage-derived ribonucleoside-diphosphate
           reductase subunit beta; AltName: Full=Ribonucleotide
           reductase small subunit
 gi|2522310|gb|AAB92486.1| YojQ/S [Bacillus subtilis subsp. subtilis str. 168]
 gi|3025640|gb|AAC13135.1| unknown [Bacillus phage SPbeta]
 gi|32468776|emb|CAB13896.2| SPbeta phage ribonucleoside-diphosphate reductase, beta subunit
           [Bacillus subtilis subsp. subtilis str. 168]
          Length = 329

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 58/123 (47%), Gaps = 7/123 (5%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +   +  +I  +      KE    +  +L E    E+ Y  +      VGL
Sbjct: 195 IRDEAIHGVYVGLLAQEIYKKQTPQKQKELYAWALNLLQELYENELEYTEDVY--DQVGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
            AP  ++++++ AN+  + +G +  F+  + NP   +   ++ K +  +FF T+   Y++
Sbjct: 253 -APDVKKFIRYNANKALNNLGFDHWFEEEDVNPI--VINGLNTKTKSHDFFSTKGNGYKK 309

Query: 119 GAE 121
              
Sbjct: 310 ATV 312


>gi|182682906|ref|YP_001837030.1| putative aerobic ribonucleoside diphosphate reductase, small
           subunit [Enterobacteria phage EPS7]
 gi|182630618|gb|ACB97550.1| putative aerobic ribonucleoside diphosphate reductase, small
           subunit [Enterobacteria phage EPS7]
          Length = 381

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 12/108 (11%)

Query: 3   DESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGF 57
           DE+LH          +  Q   +   L  +   +    +L      EI + H     +  
Sbjct: 238 DEALHTQMSKAIIQIMFQQFDKD---LVDEALAKAPTQLLKT-LKTEIEWGHFIFKGRSL 293

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLE---PLFKYTENPFPWMSEVIDL 102
           +GLNA   E+Y+ F+       IG+E    L   T+NP PW+   +D 
Sbjct: 294 IGLNAELLEEYLYFVGRNAFMHIGVEWPSHLPVITKNPIPWIMNWLDT 341


>gi|27357032|gb|AAN86693.1| ribonucleotide reductase small subunit [Red sea bream iridovirus]
          Length = 48

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 26/48 (54%)

Query: 25 LWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFI 72
          +  K  Q  +  ++ +A  +E A+  E +    +G+N+ S + Y+QF+
Sbjct: 1  MANKPCQDDAHEIISDAVDIETAFFREALKTPLLGMNSDSMKLYIQFV 48


>gi|13095637|ref|NP_076552.1| ribonucleotide reductase small subunit [Bovine herpesvirus 4]
 gi|12802587|gb|AAK07979.1|AF318573_59 ribonucleotide reductase small subunit [Bovine herpesvirus 4]
          Length = 305

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 43/129 (33%), Gaps = 18/129 (13%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
           RDE LH      + N +    + PH+           +  EA  +E  +       G   
Sbjct: 189 RDELLHTRAAALLYNTMVSGADKPHML------WVHNLFKEAVEVEHEFI-LVKSSGVSA 241

Query: 60  LNAPSCEQYMQFIANRRCHQIGL---EPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
           +N      +++  A+R    I L          + P           K  NFFE   ++Y
Sbjct: 242 VNVDDIRSFLEATADRILKSINLPPIYGTPPPPKCPL----VYTGCVKNVNFFERDNSDY 297

Query: 117 QQGAELKWD 125
              + +K D
Sbjct: 298 T--SSIKDD 304


>gi|300870141|ref|YP_003785012.1| ribonucleotide-diphosphate reductase subunit beta [Brachyspira
           pilosicoli 95/1000]
 gi|300687840|gb|ADK30511.1| ribonucleotide-diphosphate reductase beta subunit [Brachyspira
           pilosicoli 95/1000]
          Length = 359

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 11/133 (8%)

Query: 3   DE-SLHLNFGIDVINQIKIENPHLWTKEFQ-----QKSRTMLHEATLLEIAYAHETM-PK 55
           DE + H+  G +VI  ++ +    + + F        ++ M       EI +A      K
Sbjct: 227 DELNTHVPTGKNVIGILRKDANQGFKELFDSGWYNDMAKEMTEFTVNEEIKWAKYLFDGK 286

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKE-KNFFETR 112
              G+N+   E ++++ A  R   +G+E  +  +   +   W +   D+ K+     ET 
Sbjct: 287 EVSGINSSVSEHFIKYWAGVRLKDLGVETEYLKEPKSDIIDWFNAYRDINKQNAALQETT 346

Query: 113 VTEYQQGAELKWD 125
            T YQ+   LK D
Sbjct: 347 NTSYQK-GALKND 358


>gi|293374706|ref|ZP_06621014.1| ribonucleoside-diphosphate reductase, beta subunit [Turicibacter
           sanguinis PC909]
 gi|325840602|ref|ZP_08167083.1| ribonucleoside-diphosphate reductase, beta subunit [Turicibacter
           sp. HGF1]
 gi|292646620|gb|EFF64622.1| ribonucleoside-diphosphate reductase, beta subunit [Turicibacter
           sanguinis PC909]
 gi|325490251|gb|EGC92584.1| ribonucleoside-diphosphate reductase, beta subunit [Turicibacter
           sp. HGF1]
          Length = 321

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 53/131 (40%), Gaps = 17/131 (12%)

Query: 1   MRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
           +RDE LH      F   +++    E       + +Q++  M+ E   +E+ Y+       
Sbjct: 191 LRDEKLHTVGVGFFAQQLLS----EFDESIQAKLKQQAVEMMQEIYEVEVEYSKVLYEN- 245

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETR 112
            + +       Y+Q+  N     + L PLF   E   NP   +   I  + +  +FF T+
Sbjct: 246 -LDM-IDDVVSYIQYNVNYALQCLNLNPLFDIVESDINPI--VLNGISTETKNHDFFSTK 301

Query: 113 VTEYQQGAELK 123
              Y +  +++
Sbjct: 302 GNGYIKTTKVE 312


>gi|45259565|dbj|BAD12265.1| p53-inducible ribonucleotide reductase small subunit 2 short form
           beta [Homo sapiens]
          Length = 66

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 2/46 (4%)

Query: 77  CHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122
              +  + +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A +
Sbjct: 9   AAGLDQDEVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFAVM 52


>gi|296127719|ref|YP_003634971.1| ribonucleotide reductase [Brachyspira murdochii DSM 12563]
 gi|296019535|gb|ADG72772.1| ribonucleotide reductase [Brachyspira murdochii DSM 12563]
          Length = 357

 Score = 55.4 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 11/133 (8%)

Query: 3   DE-SLHLNFGIDVINQIKIENPHLWTKEFQ-----QKSRTMLHEATLLEIAYAHETM-PK 55
           DE ++H+  G +++  ++ E    ++  F+       +R M       EI +A      K
Sbjct: 225 DELNVHVPTGKNLMTILRKEAHQGFSHLFKNGWFYDTARAMTEYTVNEEIKWAKYLFDGK 284

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENP--FPWMSEVIDLKKE-KNFFETR 112
              G+N+   E ++++ A  R   I +E  +   +      W +   D+ K+     ET 
Sbjct: 285 EVSGINSSVSEHFIKYWAGIRLKDIDVETEYLSEKKSDIIDWFNSYRDINKQNAALQETT 344

Query: 113 VTEYQQGAELKWD 125
            T YQ+   LK D
Sbjct: 345 NTSYQK-GALKND 356


>gi|9629622|ref|NP_044898.1| ribonucleotide reductase subunit 2 [Murid herpesvirus 4]
 gi|6625623|gb|AAF19324.1|AF105037_56 60 [murid herpesvirus 4]
 gi|1850859|emb|CAA70275.1| ribonucleotide reductase, small subunit [Murid herpesvirus 4]
 gi|2317992|gb|AAB66450.1| ribonucleotide reductase small [murid herpesvirus 4]
          Length = 305

 Score = 55.4 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 42/121 (34%), Gaps = 16/121 (13%)

Query: 3   DESLHLNFGIDVINQIK--IENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           DE LH      + N +    E P           + +  EA  +E ++      K    +
Sbjct: 190 DELLHTRAAAVLYNSLIPAKERPD------AAWIKRLFQEAVEVEYSFIA-AKSKNVTLV 242

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
                ++++Q   +R    IG+EP++        P           K  NFFE   T+Y 
Sbjct: 243 VPGEIKKFLQATCDRILQSIGVEPIYGSHAPVTCPLS----YNGCIKSVNFFEREGTDYS 298

Query: 118 Q 118
            
Sbjct: 299 T 299


>gi|68068657|ref|XP_676239.1| ribonucleotide reductase small subunit [Plasmodium berghei strain
           ANKA]
 gi|56495842|emb|CAH97095.1| ribonucleotide reductase small subunit, putative [Plasmodium
           berghei]
          Length = 299

 Score = 55.4 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 37/94 (39%), Gaps = 8/94 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE L  +F +   N       HL  K   +        A  LE  +  + +   F+ + 
Sbjct: 179 RDEYLQGDFSVMCCN-------HLNNKLKYESVLYYFKSAVELEYNFCVDMLDFNFLKIT 231

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 95
               +Q++Q++A+     +     F  ++ PF W
Sbjct: 232 KEQVKQFLQYLADTMLLNLKYPKHFN-SKYPFTW 264


>gi|154508355|ref|ZP_02043997.1| hypothetical protein ACTODO_00852 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797989|gb|EDN80409.1| hypothetical protein ACTODO_00852 [Actinomyces odontolyticus ATCC
           17982]
          Length = 425

 Score = 55.4 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 52/135 (38%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          E+      + +  + ++L+E    E  Y  +      +GL
Sbjct: 295 IRDEAVHGYYIGYKYQLAVNESSQERQDDLRDYTYSLLYELYENEEQYTEDLY--DPLGL 352

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 353 T-EDVKKFLRYNANKALMNLGYEALFPADATDVNPAILAALSPNADENH--DFFSGSGSS 409

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 410 YVMGEVVDTEDEDWD 424


>gi|289423472|ref|ZP_06425274.1| ribonucleoside-diphosphate reductase, beta subunit
           [Peptostreptococcus anaerobius 653-L]
 gi|289156106|gb|EFD04769.1| ribonucleoside-diphosphate reductase, beta subunit
           [Peptostreptococcus anaerobius 653-L]
          Length = 337

 Score = 55.0 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 47/121 (38%), Gaps = 7/121 (5%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH  +   +  +   E  +    E +     +L E    E  Y         +GL
Sbjct: 207 LRDESLHGKYIGLLAQEKLREFSYDDRNELKDAVYRLLKELMENEEKYTRMLYEG--LGL 264

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
                  ++++ AN     +G E  +K    N    +   +  + +  +FF T+   YQ+
Sbjct: 265 -EDQVINFLRYNANSALVNLGFEEFYKVEPVNAI--VLNGLSTETKTHDFFSTKGNGYQK 321

Query: 119 G 119
           G
Sbjct: 322 G 322


>gi|323495950|ref|ZP_08101016.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio
           sinaloensis DSM 21326]
 gi|323318985|gb|EGA71930.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio
           sinaloensis DSM 21326]
          Length = 323

 Score = 55.0 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 51/134 (38%), Gaps = 13/134 (9%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          E       + + ++ +++     +E  Y         VGL
Sbjct: 193 IRDEAIHGYYIGYKFQLAFNELSEQEQAKVKDEAYSLMFSLYEIESQYTESLY--DQVGL 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVI-DLKKEKNFFETRVTEY 116
                + ++ + AN+    +G EPLF       NP   M+ +  +  +  +FF    + Y
Sbjct: 251 T-EDVKHFLHYNANKALMNLGFEPLFPDELCQVNPAI-MAALSPNADENHDFFSGSGSSY 308

Query: 117 QQGAEL-----KWD 125
             G  +      WD
Sbjct: 309 VIGKAVATEDEDWD 322


>gi|326632980|ref|YP_004306569.1| putative aerobic ribonucleoside diphosphate reductase small subunit
           [Enterobacteria phage SPC35]
 gi|321272174|gb|ADW80066.1| putative aerobic ribonucleoside diphosphate reductase small subunit
           [Enterobacteria phage SPC35]
          Length = 381

 Score = 54.7 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 4/104 (3%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVGLN 61
           DE+LH      +I  +  +       E   K+   L +    EI + H     +  +GLN
Sbjct: 238 DEALHTQMSKAIIQIMFQQFDKDLVNEAVAKAPAQLLKTLKTEIEWGHFIFKGRSLIGLN 297

Query: 62  APSCEQYMQFIANRRCHQIGLE---PLFKYTENPFPWMSEVIDL 102
           A   E+Y+ F+       IG++    L   T+NP PW+   +D 
Sbjct: 298 AELLEEYLYFVGRNAFMHIGVKWPSHLPVITKNPIPWIMNWLDT 341


>gi|326536370|ref|YP_004300811.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage 133]
 gi|299483451|gb|ADJ19545.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage 133]
          Length = 382

 Score = 54.3 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 43/107 (40%), Gaps = 6/107 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LH      ++ Q+         +E     ++++  M  E    E A+A      G 
Sbjct: 235 RDENLHHQGTRYILQQMNKGIDGTEWREIALDCKEEAEAMFLEVRAQERAWATYVYRNGH 294

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDL 102
             GL      +++ +        +GL  P+ +   +P PW+++ +  
Sbjct: 295 PDGLTTDLVHEFIDYQLVPAMKNVGLNCPIERPKRHPLPWVNKYLMA 341


>gi|262285102|gb|ACY41130.1| ribonucleotide reductase subunit 2 [Wood mouse herpesvirus]
          Length = 305

 Score = 54.3 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 3   DESLHLNFGIDVINQIK--IENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           DE LH      + N +    E P           + +  EA  +E A+      K    +
Sbjct: 190 DELLHTRAAAVLYNTLIPAKERPD------PAWIKRLFQEAVEVEYAFIA-AKSKNVTLV 242

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
                ++++Q   +R    IG+  L+        P           K  NFFE   T+Y 
Sbjct: 243 VPGEIKRFLQATCDRILQSIGVGALYGSHAPVTCPLS----YNGCIKSVNFFEREGTDYS 298

Query: 118 Q 118
            
Sbjct: 299 T 299


>gi|289705575|ref|ZP_06501967.1| ribonucleoside-diphosphate reductase, beta subunit [Micrococcus
           luteus SK58]
 gi|289557804|gb|EFD51103.1| ribonucleoside-diphosphate reductase, beta subunit [Micrococcus
           luteus SK58]
          Length = 323

 Score = 54.3 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 11/133 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +     P    +E +  +  +L E    E+ Y H+      VGL
Sbjct: 193 IRDEAVHGYYIGYKYQRSIETLPEEKREELKAFTFELLFELYENEVEYTHDLY--DAVGL 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKN--FFETRVTEYQ 117
            A   ++++ + AN+    +G EP+F   T N  P +   +    ++N  FF    + Y 
Sbjct: 251 -AEDVKKFLHYNANKALMNLGYEPMFPAETTNVNPAILSALSPNSDENHDFFSGSGSSYV 309

Query: 118 QGAE-----LKWD 125
            G         WD
Sbjct: 310 IGKAENTEDEDWD 322


>gi|241888586|ref|ZP_04775893.1| ribonucleoside-diphosphate reductase, beta subunit [Gemella
           haemolysans ATCC 10379]
 gi|241864609|gb|EER68984.1| ribonucleoside-diphosphate reductase, beta subunit [Gemella
           haemolysans ATCC 10379]
          Length = 322

 Score = 54.3 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 48/123 (39%), Gaps = 15/123 (12%)

Query: 3   DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
           DE++H +F      +V   +  E      KE       +L +    E+ Y  +   +  +
Sbjct: 195 DETIHGSFTGFDAQEVFKTLTAEEQERAEKEM----YKLLLDLYENELVYTKDIYSE--I 248

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEY 116
           GL     + Y+++ ANR    +G    F+  E NP   +   ++   +  +FF  +   Y
Sbjct: 249 GL-YEEVKDYVEYNANRALANLGYPGYFEDKEINPI--IENAMNTNTKNHDFFSVKGDGY 305

Query: 117 QQG 119
              
Sbjct: 306 VVS 308


>gi|239917558|ref|YP_002957116.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Micrococcus luteus NCTC 2665]
 gi|281413955|ref|ZP_06245697.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Micrococcus luteus NCTC 2665]
 gi|239838765|gb|ACS30562.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Micrococcus luteus NCTC 2665]
          Length = 323

 Score = 54.3 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 11/133 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +     P    +E +  +  +L E    E+ Y H+      VGL
Sbjct: 193 IRDEAVHGYYIGYKYQRSIETLPEEKREELKAFTFELLFELYENEVEYTHDLY--DAVGL 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKN--FFETRVTEYQ 117
            A   ++++ + AN+    +G EP+F   T N  P +   +    ++N  FF    + Y 
Sbjct: 251 -AEDVKKFLHYNANKALMNLGYEPMFPAETTNVNPAILSALSPNSDENHDFFSGSGSSYV 309

Query: 118 QGAE-----LKWD 125
            G         WD
Sbjct: 310 IGKAENTEDEDWD 322


>gi|242069239|ref|XP_002449896.1| hypothetical protein SORBIDRAFT_05g025245 [Sorghum bicolor]
 gi|241935739|gb|EES08884.1| hypothetical protein SORBIDRAFT_05g025245 [Sorghum bicolor]
          Length = 79

 Score = 54.3 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 55  KGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE 105
              V +N     QY+ FIA+     +  + ++    NPF WM E+I L+ +
Sbjct: 27  NALVRMNGRLMSQYIGFIADYLLMALEHKKMYDVA-NPFDWM-ELISLQGK 75


>gi|254505962|ref|ZP_05118107.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus 16]
 gi|219551185|gb|EED28165.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus 16]
          Length = 323

 Score = 53.9 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 51/134 (38%), Gaps = 13/134 (9%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          E       + + ++ +++     +E  Y         VGL
Sbjct: 193 IRDEAIHGYYIGYKFQLAFNELSQQEQAKVKDEAYSLMFSLYEIESQYTESLY--DQVGL 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVI-DLKKEKNFFETRVTEY 116
                + ++ + AN+    +G EPLF       NP   M+ +  +  +  +FF    + Y
Sbjct: 251 T-EDVKHFLHYNANKALMNLGFEPLFPDELCQVNPAI-MAALSPNADENHDFFSGSGSSY 308

Query: 117 QQGAEL-----KWD 125
             G  +      WD
Sbjct: 309 VIGKAVATEDEDWD 322


>gi|315605404|ref|ZP_07880447.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces sp.
           oral taxon 180 str. F0310]
 gi|315312973|gb|EFU61047.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces sp.
           oral taxon 180 str. F0310]
          Length = 329

 Score = 53.9 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 54/133 (40%), Gaps = 11/133 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          E+      + +  + ++L+E    E  Y  +      +GL
Sbjct: 199 IRDEAVHGYYIGYKYQLAVNESSQERQDDLRDYTYSLLYELYENEEQYTEDLY--DPLGL 256

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKN--FFETRVTEYQ 117
                ++++++ AN+    +G E LF +   N  P +   +    ++N  FF    + Y 
Sbjct: 257 T-EDVKKFLRYNANKALMNLGYEALFPHDATNVNPAILAALSPNADENHDFFSGSGSSYV 315

Query: 118 QGAEL-----KWD 125
            G  +      WD
Sbjct: 316 MGEVVDTEDEDWD 328


>gi|169630485|ref|YP_001704134.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           abscessus ATCC 19977]
 gi|169242452|emb|CAM63480.1| Probable ribonucleoside-diphosphate reductase beta subunit
           [Mycobacterium abscessus]
          Length = 324

 Score = 53.5 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +           E ++ +  +L+E    E  Y  +      VGL
Sbjct: 194 IRDEAVHGYYIGYKFQRGLERVDEAKRAEIKEYTYDLLYELYENETDYTEDLY--DEVGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPREETDVNPAILSALSPNADENH--DFFSGSGSS 308

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 309 YVIGKAVNTEDEDWD 323


>gi|312883652|ref|ZP_07743377.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309368875|gb|EFP96402.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 323

 Score = 53.5 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 49/135 (36%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          E      ++ + K+ ++L     +E  Y         VGL
Sbjct: 193 IRDEAIHGYYIGYKFQLGYQELDEARQEQLKDKAYSLLLSLYDIECQYTESLY--DQVGL 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115
                + ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 251 T-EDVKHFLHYNANKALMNLGFEALFPQELCNVNPAIMAALSPNSDENH--DFFSGSGSS 307

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 308 YVIGKAVVTEDEDWD 322


>gi|156843271|ref|XP_001644704.1| hypothetical protein Kpol_1056p47 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115352|gb|EDO16846.1| hypothetical protein Kpol_1056p47 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 361

 Score = 53.5 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/95 (13%), Positives = 37/95 (38%), Gaps = 9/95 (9%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIA-YAHETMPKGFVG 59
           ++D  +H +F + + +++K                 ++ EA  +E+     +   K    
Sbjct: 233 LKDHIVHCDFQMSIYSELKKRLD-------PGIIERIVTEAVEIELETLEDDYFNKQLDK 285

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP 94
                 +  ++++ +R     G +  F ++ NP+ 
Sbjct: 286 ETKADIKNVIEYVGDRVLMGFGNQKHF-HSANPYD 319


>gi|157692410|ref|YP_001486872.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus pumilus
           SAFR-032]
 gi|194015081|ref|ZP_03053698.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           pumilus ATCC 7061]
 gi|157681168|gb|ABV62312.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus pumilus
           SAFR-032]
 gi|194014107|gb|EDW23672.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           pumilus ATCC 7061]
          Length = 326

 Score = 53.5 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 58/129 (44%), Gaps = 9/129 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +   +  +I  +      KE    S  +L+E    E+ Y  +   +  +  
Sbjct: 195 LRDEAIHGVYVGLLAQEIYNKQTPDVQKELYDFSIDLLNELYENELHYTEDIYDQVNL-- 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
            +   ++++++ AN+    +G  P F+  E NP   +   ++ K +  +FF  +   Y++
Sbjct: 253 -SHDVKKFIRYNANKALMNLGFAPYFEEEEINPI--VLNGLNTKTKSHDFFSMKGNGYKK 309

Query: 119 GAE--LKWD 125
                LK D
Sbjct: 310 ATVEPLKDD 318


>gi|120403054|ref|YP_952883.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           vanbaalenii PYR-1]
 gi|119955872|gb|ABM12877.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Mycobacterium vanbaalenii PYR-1]
          Length = 324

 Score = 53.5 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E+ Y  +      VGL
Sbjct: 194 IRDEAVHGYYIGYKFQKGLALESEATRQELKDYTYELLFELYDNEVEYTQDLY--DEVGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 308

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 309 YVIGKAVNTEDEDWD 323


>gi|37525251|ref|NP_928595.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|36784678|emb|CAE13578.1| ribonucleoside-diphosphate reductase 2 beta chain (ribonucleotide
           reductase 2) (R2f protein) [Photorhabdus luminescens
           subsp. laumondii TTO1]
          Length = 319

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 6/126 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      Q   ++  L  KE ++ + ++L E    EI Y  E      VG 
Sbjct: 189 IRDEAIHGYYIGYKFQQSLKKHSTLEQKEIKEFTFSLLLELYENEIKYTEELY--DIVGW 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVI--DLKKEKNFFETRVTEYQ 117
                ++++ + AN+    +G E LF     N  P +   +  +  +  +FF    + Y 
Sbjct: 247 T-EDIKKFLHYNANKALMNLGYETLFPPEITNVSPTILSALSPNANENHDFFSGSGSSYV 305

Query: 118 QGAELK 123
            G  + 
Sbjct: 306 IGKAVN 311


>gi|319645694|ref|ZP_07999925.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus sp.
           BT1B_CT2]
 gi|317392241|gb|EFV73037.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus sp.
           BT1B_CT2]
          Length = 330

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 57/129 (44%), Gaps = 9/129 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +   +  +I  +         +  + +++ E    EIAY  E      VGL
Sbjct: 198 IRDEAIHGVYVGLLAQEIYNKKDEGTQHRLEMFALSLIEELYRNEIAYTEELY--DQVGL 255

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
                ++++++  N+    +G  P F+  E NP   +   ++ K +  +FF  +   Y++
Sbjct: 256 T-HDVKKFIRYNGNKALSNLGFNPYFEEEEINPI--VLNGLNTKTKSHDFFSMKGNGYKK 312

Query: 119 GAE--LKWD 125
                LK D
Sbjct: 313 ATVEPLKDD 321


>gi|291295355|ref|YP_003506753.1| ribonucleoside-diphosphate reductase [Meiothermus ruber DSM 1279]
 gi|290470314|gb|ADD27733.1| Ribonucleoside-diphosphate reductase [Meiothermus ruber DSM 1279]
          Length = 429

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 13/125 (10%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +   +  ++    P    K  ++   +ML     LE  Y+   M    +GL
Sbjct: 195 IRDESIHGVYVGLLAQEVYAGLPEAQQKTAREGVYSMLEHLAGLEERYSR--MLYTPLGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK---NFFETRVT 114
              +   + ++ A++    +GLEP F  +    NP      +  L       +FF T+  
Sbjct: 253 T-EAVVTFSRYNADKALMNLGLEPYFGVSAEAVNP----VVLAGLSTHTKNHDFFSTKGN 307

Query: 115 EYQQG 119
            Y + 
Sbjct: 308 GYVKA 312


>gi|319408170|emb|CBI81823.1| ribonucleoside-diphosphate reductase beta chain [Bartonella
           schoenbuchensis R1]
          Length = 324

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 48/132 (36%), Gaps = 12/132 (9%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          +      +E +  +  ML +   +E  Y  +      +GL
Sbjct: 194 IRDEAVHGYYVGYKFQLGFAKLDEAKKQEIKDFAFNMLFDLYSIECKYTEDLY--DAIGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115
                + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKVFIHYNANKALMNLGFEPLFPPEVCRVNPAILAALSPNSDENH--DFFSGSGSS 308

Query: 116 YQ--QGAELKWD 125
           Y   +      D
Sbjct: 309 YVIGKAVATTDD 320


>gi|326333061|ref|ZP_08199312.1| ribonucleoside-diphosphate reductase, beta subunit [Nocardioidaceae
           bacterium Broad-1]
 gi|325949135|gb|EGD41224.1| ribonucleoside-diphosphate reductase, beta subunit [Nocardioidaceae
           bacterium Broad-1]
          Length = 334

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 52/131 (39%), Gaps = 18/131 (13%)

Query: 2   RDESLHLNFGIDVINQIKIEN-PHLWTKEFQQKSRTML------------HEATLLEIAY 48
           RDE+LH   G  + N    E    +   +F+ +   +             HEA ++E+ +
Sbjct: 199 RDENLHATGGAWLFNTTLDEYAATVPADKFEAERDDLFARVRGVAEHLYAHEARIVEMLF 258

Query: 49  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENP-FPWMSEVIDLKKEKN 107
           AH        G+     E +++   +     + +EPLF    NP   W    I+  +  +
Sbjct: 259 AH----GPITGIEQADLEAFVRSRIDMTLENMRMEPLFGVEPNPVAEWFYAGINGTQFHD 314

Query: 108 FFETRVTEYQQ 118
           FF+    EY +
Sbjct: 315 FFQVTGNEYNR 325


>gi|46255232|ref|YP_006144.1| ribonucleoside-diphosphate reductase beta chain [Thermus
           thermophilus HB27]
 gi|46198081|gb|AAS82491.1| ribonucleoside-diphosphate reductase beta chain [Thermus
           thermophilus HB27]
          Length = 324

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 48/119 (40%), Gaps = 4/119 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL-NA 62
           E++H  FG++++  ++ E+P    + FQ+++  +       E A        G   L   
Sbjct: 195 ENVHGLFGVELLRLLRTEHPEALGEGFQEEALRLAQGLFRAEEALLDWLFSAGEPALVGH 254

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQQ 118
               ++++   N+     GL P F   E       W +  +   KE +FF  R   Y +
Sbjct: 255 RETLEFLKGRYNQVLALHGLPPPFPVDEKALRDTEWFTLELLADKEVDFFNKRSVAYAR 313


>gi|15827930|ref|NP_302193.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           leprae TN]
 gi|221230407|ref|YP_002503823.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           leprae Br4923]
 gi|14195114|sp|Q9CBQ2|RIR2_MYCLE RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|13093483|emb|CAC30684.1| ribonucleotide reductase small subunit [Mycobacterium leprae]
 gi|219933514|emb|CAR71826.1| ribonucleotide reductase small subunit [Mycobacterium leprae
           Br4923]
          Length = 325

 Score = 52.7 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +  +        E ++ +  +L E    E+ Y  +   +  VGL
Sbjct: 195 IRDEAVHGYYIGYKFQRGLVLVDDARRAELKEYTYELLFELYDNEVEYTQDLYDR--VGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 253 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 309

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 310 YVIGKAVVTEDEDWD 324


>gi|69245952|ref|ZP_00603724.1| Ribonucleoside-diphosphate reductase [Enterococcus faecium DO]
 gi|227552561|ref|ZP_03982610.1| Ribonucleoside-diphosphate reductase [Enterococcus faecium TX1330]
 gi|257880353|ref|ZP_05660006.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,230,933]
 gi|257882206|ref|ZP_05661859.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,231,502]
 gi|257885400|ref|ZP_05665053.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,231,501]
 gi|257888211|ref|ZP_05667864.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,141,733]
 gi|257891012|ref|ZP_05670665.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,231,410]
 gi|257894265|ref|ZP_05673918.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,231,408]
 gi|257896901|ref|ZP_05676554.1| ribonucleoside-diphosphate reductase [Enterococcus faecium Com12]
 gi|257899642|ref|ZP_05679295.1| ribonucleoside-diphosphate reductase [Enterococcus faecium Com15]
 gi|258614695|ref|ZP_05712465.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecium DO]
 gi|260562343|ref|ZP_05832857.1| ribonucleoside-diphosphate reductase [Enterococcus faecium C68]
 gi|261209282|ref|ZP_05923674.1| ribonucleoside-diphosphate reductase [Enterococcus faecium TC 6]
 gi|289567001|ref|ZP_06447402.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium D344SRF]
 gi|293378468|ref|ZP_06624631.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium PC4.1]
 gi|293553988|ref|ZP_06674590.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1039]
 gi|293563177|ref|ZP_06677635.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1162]
 gi|293568383|ref|ZP_06679704.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1071]
 gi|293570828|ref|ZP_06681875.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E980]
 gi|294615274|ref|ZP_06695151.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1636]
 gi|294617336|ref|ZP_06696975.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1679]
 gi|294623134|ref|ZP_06702020.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium U0317]
 gi|314939361|ref|ZP_07846602.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133a04]
 gi|314941564|ref|ZP_07848449.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133C]
 gi|314949609|ref|ZP_07852933.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0082]
 gi|314953716|ref|ZP_07856591.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133A]
 gi|314992172|ref|ZP_07857616.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133B]
 gi|314997663|ref|ZP_07862593.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133a01]
 gi|68195482|gb|EAN09926.1| Ribonucleoside-diphosphate reductase [Enterococcus faecium DO]
 gi|227178310|gb|EEI59282.1| Ribonucleoside-diphosphate reductase [Enterococcus faecium TX1330]
 gi|257814581|gb|EEV43339.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,230,933]
 gi|257817864|gb|EEV45192.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,231,502]
 gi|257821256|gb|EEV48386.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,231,501]
 gi|257824265|gb|EEV51197.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,141,733]
 gi|257827372|gb|EEV53998.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,231,410]
 gi|257830644|gb|EEV57251.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,231,408]
 gi|257833466|gb|EEV59887.1| ribonucleoside-diphosphate reductase [Enterococcus faecium Com12]
 gi|257837554|gb|EEV62628.1| ribonucleoside-diphosphate reductase [Enterococcus faecium Com15]
 gi|260073267|gb|EEW61608.1| ribonucleoside-diphosphate reductase [Enterococcus faecium C68]
 gi|260076828|gb|EEW64563.1| ribonucleoside-diphosphate reductase [Enterococcus faecium TC 6]
 gi|289161202|gb|EFD09101.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium D344SRF]
 gi|291588904|gb|EFF20731.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1071]
 gi|291591871|gb|EFF23503.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1636]
 gi|291596409|gb|EFF27663.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1679]
 gi|291597503|gb|EFF28668.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium U0317]
 gi|291601845|gb|EFF32095.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1039]
 gi|291604868|gb|EFF34344.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1162]
 gi|291609096|gb|EFF38371.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E980]
 gi|292642797|gb|EFF60944.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium PC4.1]
 gi|313588298|gb|EFR67143.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133a01]
 gi|313593275|gb|EFR72120.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133B]
 gi|313594300|gb|EFR73145.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133A]
 gi|313599623|gb|EFR78466.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133C]
 gi|313641346|gb|EFS05926.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133a04]
 gi|313644033|gb|EFS08613.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0082]
          Length = 321

 Score = 52.7 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    +  +     +L+E    E  Y  E      +G 
Sbjct: 189 IRDESVHGTYIGYKFQLGFNELPEAEQETLKDWMYNLLYELYENEERYTEELY--DPIGW 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G++PLF  T    NP   M+ +       +FF
Sbjct: 247 T-EEVKTFLRYNANKALMNLGMDPLFPDTANDVNPIV-MNGISTGTSNHDFF 296


>gi|15842613|ref|NP_337650.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis CDC1551]
 gi|31794226|ref|NP_856719.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           bovis AF2122/97]
 gi|57117051|ref|YP_177921.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Rv]
 gi|121638932|ref|YP_979156.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           bovis BCG str. Pasteur 1173P2]
 gi|148662901|ref|YP_001284424.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Ra]
 gi|148824239|ref|YP_001288993.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis F11]
 gi|167969649|ref|ZP_02551926.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Ra]
 gi|215405040|ref|ZP_03417221.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|215412903|ref|ZP_03421607.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 94_M4241A]
 gi|215428496|ref|ZP_03426415.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T92]
 gi|215432000|ref|ZP_03429919.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|215447324|ref|ZP_03434076.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|218754813|ref|ZP_03533609.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis GM 1503]
 gi|219559083|ref|ZP_03538159.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T17]
 gi|224991424|ref|YP_002646113.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
           bovis BCG str. Tokyo 172]
 gi|253797854|ref|YP_003030855.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis KZN 1435]
 gi|254233678|ref|ZP_04927003.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
           [Mycobacterium tuberculosis C]
 gi|254365678|ref|ZP_04981723.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
           [Mycobacterium tuberculosis str. Haarlem]
 gi|254552123|ref|ZP_05142570.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|260188080|ref|ZP_05765554.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis CPHL_A]
 gi|260202186|ref|ZP_05769677.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis T46]
 gi|260206381|ref|ZP_05773872.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis K85]
 gi|289444611|ref|ZP_06434355.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           tuberculosis T46]
 gi|289448726|ref|ZP_06438470.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis CPHL_A]
 gi|289553161|ref|ZP_06442371.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis KZN 605]
 gi|289571250|ref|ZP_06451477.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis T17]
 gi|289575758|ref|ZP_06455985.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis K85]
 gi|289746856|ref|ZP_06506234.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|289751720|ref|ZP_06511098.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis T92]
 gi|289755164|ref|ZP_06514542.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|289759173|ref|ZP_06518551.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|289763226|ref|ZP_06522604.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
           [Mycobacterium tuberculosis GM 1503]
 gi|294993448|ref|ZP_06799139.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 210]
 gi|297635679|ref|ZP_06953459.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN 4207]
 gi|297732677|ref|ZP_06961795.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN R506]
 gi|298526518|ref|ZP_07013927.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 94_M4241A]
 gi|306777354|ref|ZP_07415691.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu001]
 gi|306781258|ref|ZP_07419595.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu002]
 gi|306785899|ref|ZP_07424221.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu003]
 gi|306790253|ref|ZP_07428575.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu004]
 gi|306794748|ref|ZP_07433050.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu005]
 gi|306798990|ref|ZP_07437292.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu006]
 gi|306804833|ref|ZP_07441501.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu008]
 gi|306809026|ref|ZP_07445694.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu007]
 gi|306969126|ref|ZP_07481787.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu009]
 gi|306973470|ref|ZP_07486131.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu010]
 gi|307081181|ref|ZP_07490351.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu011]
 gi|307085780|ref|ZP_07494893.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu012]
 gi|313660009|ref|ZP_07816889.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN V2475]
 gi|81671996|sp|Q50549|RIR2B_MYCTU RecName: Full=Ribonucleoside-diphosphate reductase subunit beta
           nrdF2; AltName: Full=Ribonucleoside-diphosphate
           reductase nrdF2; AltName: Full=Ribonucleotide reductase
           R2-2 small subunit
 gi|1395209|gb|AAB81406.1| ribonucleotide reductase R2-2 small subunit [Mycobacterium
           tuberculosis]
 gi|13882928|gb|AAK47464.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Mycobacterium tuberculosis CDC1551]
 gi|31619821|emb|CAD96761.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF2
           (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN)
           [Mycobacterium bovis AF2122/97]
 gi|41352780|emb|CAE55544.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF2
           (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN)
           [Mycobacterium tuberculosis H37Rv]
 gi|121494580|emb|CAL73061.1| Ribonucleoside-diphosphate reductase (beta chain) nrdF2
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124599207|gb|EAY58311.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
           [Mycobacterium tuberculosis C]
 gi|134151191|gb|EBA43236.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
           [Mycobacterium tuberculosis str. Haarlem]
 gi|148507053|gb|ABQ74862.1| ribonucleoside-diphosphate reductase subunit beta NrdF2
           [Mycobacterium tuberculosis H37Ra]
 gi|148722766|gb|ABR07391.1| ribonucleoside-diphosphate reductase beta subunit nrdF2
           [Mycobacterium tuberculosis F11]
 gi|224774539|dbj|BAH27345.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
           bovis BCG str. Tokyo 172]
 gi|253319357|gb|ACT23960.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis KZN 1435]
 gi|289417530|gb|EFD14770.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           tuberculosis T46]
 gi|289421684|gb|EFD18885.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis CPHL_A]
 gi|289437793|gb|EFD20286.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis KZN 605]
 gi|289540189|gb|EFD44767.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis K85]
 gi|289545004|gb|EFD48652.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis T17]
 gi|289687384|gb|EFD54872.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|289692307|gb|EFD59736.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis T92]
 gi|289695751|gb|EFD63180.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|289710732|gb|EFD74748.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
           [Mycobacterium tuberculosis GM 1503]
 gi|289714737|gb|EFD78749.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|298496312|gb|EFI31606.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 94_M4241A]
 gi|308214246|gb|EFO73645.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu001]
 gi|308325901|gb|EFP14752.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu002]
 gi|308329423|gb|EFP18274.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu003]
 gi|308333268|gb|EFP22119.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu004]
 gi|308336923|gb|EFP25774.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu005]
 gi|308340739|gb|EFP29590.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu006]
 gi|308344606|gb|EFP33457.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu007]
 gi|308348554|gb|EFP37405.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu008]
 gi|308353280|gb|EFP42131.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu009]
 gi|308357113|gb|EFP45964.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu010]
 gi|308361065|gb|EFP49916.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu011]
 gi|308364701|gb|EFP53552.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu012]
 gi|323718280|gb|EGB27458.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis CDC1551A]
 gi|326902729|gb|EGE49662.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis W-148]
 gi|328457631|gb|AEB03054.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis KZN 4207]
          Length = 324

 Score = 52.7 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +       +   E +  +  +L E    E+ Y  +      VGL
Sbjct: 194 IRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDLY--DEVGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 308

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 309 YVIGKAVVTEDDDWD 323


>gi|54026269|ref|YP_120511.1| ribonucleotide-diphosphate reductase subunit beta [Nocardia
           farcinica IFM 10152]
 gi|54017777|dbj|BAD59147.1| putative ribonucleoside-diphosphate reductase beta subunit
           [Nocardia farcinica IFM 10152]
          Length = 320

 Score = 52.7 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L+E    E+ Y  +      VGL
Sbjct: 190 IRDEAVHGYYIGYKYQRGLEQVSEAEREELKNYTFELLYELYENEVEYTQDLY--DEVGL 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                + ++++ AN+    +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 248 T-EDVKTFLRYNANKALMNLGYEGLFPADETRVNPAILSALSPNADENH--DFFSGSGSS 304

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 305 YVIGKAVNTEDEDWD 319


>gi|163842202|ref|YP_001626607.1| ribonucleotide-diphosphate reductase subunit beta [Renibacterium
           salmoninarum ATCC 33209]
 gi|162955678|gb|ABY25193.1| ribonucleoside-diphosphate reductase beta chain [Renibacterium
           salmoninarum ATCC 33209]
          Length = 325

 Score = 52.7 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 55/135 (40%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L+E    EI Y H+      VGL
Sbjct: 195 IRDEAVHGYYIGYKFQKGLEKVSEERREEIKAYTFDLLYELYENEIQYTHDLY--DAVGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   ++++ + AN+    +G E +F  T    NP     +S   D     +FF    + 
Sbjct: 253 -AEDVKKFLHYNANKALMNLGYEAMFPSTVTDVNPAILSALSPNADENH--DFFSGSGSS 309

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 310 YVIGKAVNTEDEDWD 324


>gi|213585578|ref|ZP_03367404.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-0664]
          Length = 189

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 4/53 (7%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAH 50
           RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E  +A 
Sbjct: 137 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWAD 189


>gi|183981661|ref|YP_001849952.1| ribonucleoside-diphosphate reductase (beta chain) NrdF2
           [Mycobacterium marinum M]
 gi|183174987|gb|ACC40097.1| ribonucleoside-diphosphate reductase (beta chain) NrdF2
           [Mycobacterium marinum M]
          Length = 324

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +           E +  +  +L E    E+ Y  +      VGL
Sbjct: 194 IRDEAVHGYYIGYKFQRGLAAADEARRTELKDYTYELLFELYDNEVEYTQDLY--DEVGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 308

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 309 YVIGKAVVTQDEDWD 323


>gi|118617484|ref|YP_905816.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           ulcerans Agy99]
 gi|118569594|gb|ABL04345.1| ribonucleoside-diphosphate reductase (beta chain) NrdF2
           [Mycobacterium ulcerans Agy99]
          Length = 324

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +           E +  +  +L E    E+ Y  +      VGL
Sbjct: 194 IRDEAVHGYYIGYKFQRGLAAADEARRTELKDYTYELLFELYDNEVEYTQDLY--DEVGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 308

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 309 YVIGKAVATQDEDWD 323


>gi|294998842|gb|ADF58156.1| ribonucleoside-diphosphate reductase beta subunit [Pseudomonas
           phage JG004]
          Length = 348

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 4/111 (3%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQ--QKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           DE LH     ++INQ   E     +++ +  +K R  +      E       +P G + G
Sbjct: 210 DEDLHGVVSAEIINQYYAEIGRPLSEDTRRVEKIRQAIDHVYAHECRIVDMAIPGGELNG 269

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKNFF 109
            +A + + ++++  N  C ++GLE  F+  + P   W        K  +FF
Sbjct: 270 ESAENYKAFVRYRLNVWCRRLGLEDHFENDDTPIKDWFEMNTYAYKMIDFF 320


>gi|326804460|ref|YP_004327264.1| ribonucleotide-diphosphate reductase beta subunit [Pseudomonas
           phage PAK_P1]
 gi|290873873|gb|ADD65076.1| ribonucleotide-diphosphate reductase beta subunit [Pseudomonas
           phage PAK_P1]
          Length = 348

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 4/111 (3%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQ--QKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           DE LH     ++INQ   E     +++ +  +K R  +      E       +P G + G
Sbjct: 210 DEDLHGVVSAEIINQYYAEIGRPLSEDTRRVEKIRQAIDHVYAHECRIVDMAIPGGELNG 269

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKNFF 109
            +A + + ++++  N  C ++GLE  F+  + P   W        K  +FF
Sbjct: 270 ESAENYKAFVRYRLNVWCRRLGLEDHFENDDTPIKDWFEMNTYAYKMIDFF 320


>gi|226312721|ref|YP_002772615.1| ribonucleotide-diphosphate reductase subunit beta [Brevibacillus
           brevis NBRC 100599]
 gi|226095669|dbj|BAH44111.1| ribonucleoside-diphosphate reductase beta chain [Brevibacillus
           brevis NBRC 100599]
          Length = 316

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 15/124 (12%)

Query: 1   MRDESLHL----NFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
           +RDES+H         +V   + +    +      ++   +LHE    E AY      + 
Sbjct: 188 VRDESIHGLYVGVLAQEVYQGLSV----VEQTAAIEELYALLHELQENEEAYTTSLYTE- 242

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVT 114
            +GL A     Y+++ AN+    +GL+PLF   E NP   +   I  + ++ +FF  +  
Sbjct: 243 -IGL-ADEVHAYVRYNANKALMNLGLDPLFPEEEVNPI--VLNGIRTQTKQHDFFSKKGN 298

Query: 115 EYQQ 118
            Y +
Sbjct: 299 GYVR 302


>gi|257865182|ref|ZP_05644835.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus
           EC30]
 gi|257871507|ref|ZP_05651160.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus
           EC10]
 gi|257874804|ref|ZP_05654457.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus
           EC20]
 gi|325571550|ref|ZP_08147050.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           casseliflavus ATCC 12755]
 gi|257799116|gb|EEV28168.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus
           EC30]
 gi|257805671|gb|EEV34493.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus
           EC10]
 gi|257808970|gb|EEV37790.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus
           EC20]
 gi|325156026|gb|EGC68222.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           casseliflavus ATCC 12755]
          Length = 321

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ +     +L+E    E  Y  E      +G 
Sbjct: 189 IRDESVHGTYIGYKFQLGFNELPEDEQQKLKDWMYDLLYELYENEERYTEELY--DEIGW 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 247 T-EEVKTFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 296


>gi|315149360|gb|EFT93376.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0012]
          Length = 321

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P     + +     +L+E    E  Y  E      +G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQDKLKDWMYNLLYELYENEERYTEELYDD--LGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G++PLF  T    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGMDPLFADTANDVNPIV-MNGISTGTSNHDFF 295


>gi|293193572|ref|ZP_06609842.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces
           odontolyticus F0309]
 gi|292819928|gb|EFF78930.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces
           odontolyticus F0309]
          Length = 320

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 53/135 (39%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          E+      + +  + ++L+E    E  Y  +      +GL
Sbjct: 190 IRDEAVHGYYIGYKYQLAVNESSQERQDDLRDYTYSLLYELYENEEQYTEDLY--DPLGL 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN--FFETRVTE 115
                ++++++ AN+    +G E LF       NP   +   +    ++N  FF    + 
Sbjct: 248 T-EDVKKFLRYNANKALMNLGYEALFPADATDVNPA--ILAALSPNADENHDFFSGSGSS 304

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 305 YVMGEVVDTEDEDWD 319


>gi|254820788|ref|ZP_05225789.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           intracellulare ATCC 13950]
          Length = 324

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E+ Y  +      VGL
Sbjct: 194 IRDEAVHGYYIGYKFQRGLALVDDARKQELKDYTYELLFELYDNEVEYTQDLY--DEVGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 308

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 309 YVIGKAVVTEDEDWD 323


>gi|29375101|ref|NP_814254.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis V583]
 gi|227519132|ref|ZP_03949181.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis TX0104]
 gi|227553836|ref|ZP_03983885.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis HH22]
 gi|229547642|ref|ZP_04436367.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis TX1322]
 gi|229548395|ref|ZP_04437120.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis ATCC 29200]
 gi|255971023|ref|ZP_05421609.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T1]
 gi|255973536|ref|ZP_05424122.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T2]
 gi|256617388|ref|ZP_05474234.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis ATCC
           4200]
 gi|256761391|ref|ZP_05501971.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T3]
 gi|256852443|ref|ZP_05557819.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis T8]
 gi|256957628|ref|ZP_05561799.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis DS5]
 gi|256959663|ref|ZP_05563834.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis Merz96]
 gi|256963238|ref|ZP_05567409.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis
           HIP11704]
 gi|257080134|ref|ZP_05574495.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis JH1]
 gi|257080866|ref|ZP_05575227.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis E1Sol]
 gi|257083550|ref|ZP_05577911.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis Fly1]
 gi|257085823|ref|ZP_05580184.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis D6]
 gi|257088966|ref|ZP_05583327.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis CH188]
 gi|257415187|ref|ZP_05592181.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis
           AR01/DG]
 gi|257418242|ref|ZP_05595236.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T11]
 gi|257420749|ref|ZP_05597739.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis X98]
 gi|293384855|ref|ZP_06630698.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis R712]
 gi|293389145|ref|ZP_06633612.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis S613]
 gi|294780704|ref|ZP_06746065.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis PC1.1]
 gi|300861776|ref|ZP_07107856.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TUSoD Ef11]
 gi|307272281|ref|ZP_07553541.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0855]
 gi|307275556|ref|ZP_07556697.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX2134]
 gi|307282794|ref|ZP_07562994.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0860]
 gi|307288831|ref|ZP_07568809.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0109]
 gi|307290616|ref|ZP_07570524.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0411]
 gi|312900212|ref|ZP_07759524.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0470]
 gi|312904832|ref|ZP_07763972.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0635]
 gi|312908153|ref|ZP_07767131.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis DAPTO 512]
 gi|312952106|ref|ZP_07770987.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0102]
 gi|312979089|ref|ZP_07790804.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis DAPTO 516]
 gi|29342560|gb|AAO80325.1| ribonucleoside-diphosphate reductase 2, beta subunit [Enterococcus
           faecalis V583]
 gi|227073409|gb|EEI11372.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis TX0104]
 gi|227177089|gb|EEI58061.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis HH22]
 gi|229306611|gb|EEN72607.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis ATCC 29200]
 gi|229307134|gb|EEN73121.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis TX1322]
 gi|255962041|gb|EET94517.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T1]
 gi|255966408|gb|EET97030.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T2]
 gi|256596915|gb|EEU16091.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis ATCC
           4200]
 gi|256682642|gb|EEU22337.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T3]
 gi|256712297|gb|EEU27329.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis T8]
 gi|256948124|gb|EEU64756.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis DS5]
 gi|256950159|gb|EEU66791.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis Merz96]
 gi|256953734|gb|EEU70366.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis
           HIP11704]
 gi|256988164|gb|EEU75466.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis JH1]
 gi|256988896|gb|EEU76198.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis E1Sol]
 gi|256991580|gb|EEU78882.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis Fly1]
 gi|256993853|gb|EEU81155.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis D6]
 gi|256997778|gb|EEU84298.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis CH188]
 gi|257157015|gb|EEU86975.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis
           ARO1/DG]
 gi|257160070|gb|EEU90030.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T11]
 gi|257162573|gb|EEU92533.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis X98]
 gi|291077859|gb|EFE15223.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis R712]
 gi|291081516|gb|EFE18479.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis S613]
 gi|294452314|gb|EFG20755.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis PC1.1]
 gi|295114163|emb|CBL32800.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Enterococcus sp. 7L76]
 gi|300848301|gb|EFK76058.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TUSoD Ef11]
 gi|306498330|gb|EFM67839.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0411]
 gi|306500300|gb|EFM69639.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0109]
 gi|306503650|gb|EFM72881.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0860]
 gi|306507661|gb|EFM76790.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX2134]
 gi|306511170|gb|EFM80180.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0855]
 gi|310625861|gb|EFQ09144.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis DAPTO 512]
 gi|310629888|gb|EFQ13171.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0102]
 gi|310631838|gb|EFQ15121.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0635]
 gi|311288123|gb|EFQ66679.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis DAPTO 516]
 gi|311292573|gb|EFQ71129.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0470]
 gi|315026267|gb|EFT38199.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX2137]
 gi|315028520|gb|EFT40452.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX4000]
 gi|315032246|gb|EFT44178.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0017]
 gi|315035532|gb|EFT47464.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0027]
 gi|315143982|gb|EFT87998.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX2141]
 gi|315146930|gb|EFT90946.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX4244]
 gi|315155004|gb|EFT99020.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0043]
 gi|315158779|gb|EFU02796.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0312]
 gi|315161036|gb|EFU05053.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0645]
 gi|315166222|gb|EFU10239.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX1302]
 gi|315167729|gb|EFU11746.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX1341]
 gi|315170811|gb|EFU14828.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX1342]
 gi|315173869|gb|EFU17886.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX1346]
 gi|315574921|gb|EFU87112.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0309B]
 gi|315576500|gb|EFU88691.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0630]
 gi|315582368|gb|EFU94559.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0309A]
 gi|327534208|gb|AEA93042.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis OG1RF]
          Length = 321

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P     + +     +L+E    E  Y  E      +G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQDKLKDWMYNLLYELYENEERYTEELYDD--LGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G++PLF  T    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGMDPLFADTANDVNPIV-MNGISTGTSNHDFF 295


>gi|326772780|ref|ZP_08232064.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces
           viscosus C505]
 gi|326637412|gb|EGE38314.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces
           viscosus C505]
          Length = 325

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 50/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          E+     +E +  +  +L E    E  Y  +      +GL
Sbjct: 195 IRDEAVHGYYIGYKYQLAVRESSPERQQELKDYTFDLLMELYDNEEQYTEDLY--DELGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 253 T-EDVKKFLRYNANKALMNLGYEALFPADAVDVNPAILASLSPNADENH--DFFSGSGSS 309

Query: 116 YQQGAE-----LKWD 125
           Y  G         WD
Sbjct: 310 YVMGTAEATQDEDWD 324


>gi|108798796|ref|YP_638993.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           sp. MCS]
 gi|119867913|ref|YP_937865.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           sp. KMS]
 gi|126434397|ref|YP_001070088.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           sp. JLS]
 gi|108769215|gb|ABG07937.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Mycobacterium sp. MCS]
 gi|119694002|gb|ABL91075.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Mycobacterium sp. KMS]
 gi|126234197|gb|ABN97597.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Mycobacterium sp. JLS]
          Length = 320

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +           E +  +  +L E    E+ Y  +      VGL
Sbjct: 190 IRDEAVHGYYIGYKFQKGLALQDPATQAELKDYTYELLFELYDNEVEYTQDLY--DSVGL 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 248 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 304

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 305 YVIGKAVVTEDEDWD 319


>gi|296171158|ref|ZP_06852606.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295894294|gb|EFG74049.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 324

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +           E +  +  +L E    E+ Y  +      VGL
Sbjct: 194 IRDEAVHGYYIGYKYQRGLALVDEAKRAELKDYTYELLFELYDNEVEYTQDLY--DEVGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 308

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 309 YVIGKAVVTEDEDWD 323


>gi|315153942|gb|EFT97958.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0031]
          Length = 321

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P     + +     +L+E    E  Y  E      +G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQDKLKDWMYNLLYELYENEERYTEELYDD--LGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G++PLF  T    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGMDPLFADTANDVNPIV-MNGISTGTSNHDFF 295


>gi|310816082|ref|YP_003964046.1| ribonucleoside-diphosphate reductase, beta subunit
           [Ketogulonicigenium vulgare Y25]
 gi|308754817|gb|ADO42746.1| ribonucleoside-diphosphate reductase, beta subunit
           [Ketogulonicigenium vulgare Y25]
          Length = 317

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 50/122 (40%), Gaps = 6/122 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DE++H  +            P    +E +  +  +L +   +E +YA +      +GL
Sbjct: 187 IKDEAVHGYYIGYKFQLGYALLPEAEKEELKGFAYDLLLQLYEIECSYAADLY--DGIGL 244

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
                +Q++ + AN+    +G +P+F       NP    +   D  +  +FF    + Y 
Sbjct: 245 T-EDVKQFLHYNANKSLMNLGFDPIFPDEITNFNPAVLAALAPDANENHDFFSGSGSSYV 303

Query: 118 QG 119
            G
Sbjct: 304 IG 305


>gi|307268568|ref|ZP_07549940.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX4248]
 gi|306515057|gb|EFM83600.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX4248]
          Length = 321

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P     + +     +L+E    E  Y  E      +G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQDKLKDWMYNLLYELYENEERYTEELYDD--LGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G++PLF  T    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGMDPLFADTANDVNPIV-MNGISTGTSNHDFF 295


>gi|315445193|ref|YP_004078072.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Mycobacterium sp. Spyr1]
 gi|315263496|gb|ADU00238.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Mycobacterium sp. Spyr1]
          Length = 320

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E+ Y  +      VGL
Sbjct: 190 IRDEAVHGYYIGYKFQKGLALADDATRQELKDYTYELLFELYDNEVEYTQDLY--DEVGL 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 248 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 304

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 305 YVIGKAVVTEDEDWD 319


>gi|145224865|ref|YP_001135543.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           gilvum PYR-GCK]
 gi|145217351|gb|ABP46755.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Mycobacterium gilvum PYR-GCK]
          Length = 320

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E+ Y  +      VGL
Sbjct: 190 IRDEAVHGYYIGYKFQKGLALADDATRQELKDYTYELLFELYDNEVEYTQDLY--DEVGL 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 248 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 304

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 305 YVIGKAVITEDEDWD 319


>gi|311993498|ref|YP_004010363.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage Acj9]
 gi|295917455|gb|ADG60126.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage Acj9]
          Length = 379

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 42/107 (39%), Gaps = 6/107 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LH      ++ Q+         +E     + ++  +  E    E A+A      G 
Sbjct: 231 RDENLHHQGTRYILQQMNKGIDGTEWREIALECKAEAEELFIEVRNQERAWASYVYRDGC 290

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDL 102
             GL       ++ +      + +GL  P+ +   +P PW+++ +  
Sbjct: 291 PPGLTVELVHDFIDYQLVPAMNNVGLTCPVQRPKRHPLPWVNKYLMA 337


>gi|320095222|ref|ZP_08026924.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces sp.
           oral taxon 178 str. F0338]
 gi|319977850|gb|EFW09491.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces sp.
           oral taxon 178 str. F0338]
          Length = 319

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 53/135 (39%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          E+      + +  + ++L+E    E  Y  +      +GL
Sbjct: 189 IRDEAVHGYYIGYKYQLAVGESTQERRDDLKDYTYSLLYELYENEEQYTEDLY--DPLGL 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF +     NP     +S   D     +FF    + 
Sbjct: 247 T-EDVKKFLRYNANKALMNLGYEALFPHDATDVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 304 YVMGEVVDTEDEDWD 318


>gi|219883069|ref|YP_002478233.1| Ribonucleoside-diphosphate reductase [Arthrobacter chlorophenolicus
           A6]
 gi|219862075|gb|ACL42416.1| Ribonucleoside-diphosphate reductase [Arthrobacter chlorophenolicus
           A6]
          Length = 326

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 57/135 (42%), Gaps = 13/135 (9%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DE++H  +      +   +      +E Q  +  +L E    E+ Y H+      VGL
Sbjct: 194 IKDEAVHGYYIGYKFQRGLEKETAERREELQAYAYELLDELYENEVQYTHDLY--DGVGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKN--FFETRVTEYQ 117
            A   ++++ + AN+    +GL+P+F +   N  P +   +    ++N  FF    + Y 
Sbjct: 252 -AEDVKKFLHYNANKALMNLGLDPVFAQDATNVNPAILSALSPNADENHDFFSGSGSSYI 310

Query: 118 QGAE-------LKWD 125
            G+          WD
Sbjct: 311 VGSSKAVSTLDGDWD 325


>gi|254776333|ref|ZP_05217849.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           avium subsp. avium ATCC 25291]
          Length = 320

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E+ Y  +      VGL
Sbjct: 190 IRDEAVHGYYIGYKYQRGLALVDDAKRQELKDYTYELLFELYDNEVEYTQDLY--DEVGL 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 248 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 304

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 305 YVIGKAVVTEDEDWD 319


>gi|304406354|ref|ZP_07388010.1| Ribonucleoside-diphosphate reductase [Paenibacillus curdlanolyticus
           YK9]
 gi|304344412|gb|EFM10250.1| Ribonucleoside-diphosphate reductase [Paenibacillus curdlanolyticus
           YK9]
          Length = 318

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 15/124 (12%)

Query: 1   MRDESLHL----NFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
           +RDES+H         +V   +  E       E   + R ++      E  Y  E     
Sbjct: 190 LRDESIHGLYVGVLAQEVYRDLTPEERG----EADTELRELIDRLHANEEVYTKELYSG- 244

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVT 114
            VGL A     Y+++  N+    +GL+P+F   E NP  +    I  + ++ +FF  +  
Sbjct: 245 -VGL-ADEVLTYVRYNCNKGLMNLGLDPIFPEEEINPIVF--NGISTRTKQHDFFSKKGN 300

Query: 115 EYQQ 118
            Y +
Sbjct: 301 GYVR 304


>gi|320531976|ref|ZP_08032874.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
           oral taxon 171 str. F0337]
 gi|320135808|gb|EFW27858.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
           oral taxon 171 str. F0337]
          Length = 324

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 50/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          E+     +E +  +  +L E    E  Y  +      +GL
Sbjct: 194 IRDEAVHGYYIGYKYQLAVRESSPERQQELKDYTFELLMELYDNEEQYTEDLY--DELGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPADAVDVNPAILASLSPNADENH--DFFSGSGSS 308

Query: 116 YQQGAE-----LKWD 125
           Y  G         WD
Sbjct: 309 YVMGTAEATQDEDWD 323


>gi|55978391|ref|YP_145447.1| ribonucleoside-diphosphate reductase, beta subunit [Thermus
           thermophilus HB8]
 gi|55773564|dbj|BAD72004.1| ribonucleoside-diphosphate reductase, beta subunit [Thermus
           thermophilus HB8]
          Length = 294

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 49/119 (41%), Gaps = 4/119 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL-NA 62
           E++H  FG++++  ++ E+P    + FQ+++  +       E A        G   L   
Sbjct: 165 ENVHGLFGVELLRLLRTEHPEALGEGFQEEALRLAQGLFRAEEALLDWLFSAGEPALVGH 224

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQQ 118
               ++++   N+     GL P+F   E       W +  +   KE +FF  R   Y +
Sbjct: 225 RETLEFLKGRYNQVLALHGLPPVFSVDEKALRDTEWFTLELLADKEVDFFNKRSVAYAR 283


>gi|328957625|ref|YP_004375011.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium
           sp. 17-4]
 gi|328673949|gb|AEB29995.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium
           sp. 17-4]
          Length = 320

 Score = 51.6 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 45/111 (40%), Gaps = 5/111 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          + P    +E +  +  +L +    E+ YA        +G 
Sbjct: 188 LRDESVHGTYIGYKFQIAFNQLPDDEKEEIKNWTYELLFKLYQNEVKYAEYLY--DEIGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  T N      M+ +       +FF
Sbjct: 246 T-ERVKVFLRYNANKALQNLGFDPLFPDTANDVDPVIMNGISTGTSNHDFF 295


>gi|325066257|ref|ZP_08124930.1| Ribonucleoside-diphosphate reductase [Actinomyces oris K20]
          Length = 324

 Score = 51.6 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 49/135 (36%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          E+      E +  +  +L E    E  Y  +      +GL
Sbjct: 194 IRDEAVHGYYIGYKYQLAVRESSPERQAELKDYTFELLMELYDNEEQYTEDLY--DELGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPADAVDVNPAILASLSPNADENH--DFFSGSGSS 308

Query: 116 YQQGAE-----LKWD 125
           Y  G         WD
Sbjct: 309 YVMGTAEATQDEDWD 323


>gi|239636654|ref|ZP_04677656.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           warneri L37603]
 gi|239598009|gb|EEQ80504.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           warneri L37603]
 gi|330683860|gb|EGG95634.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           epidermidis VCU121]
          Length = 324

 Score = 51.6 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 7/109 (6%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DES+H  F       ++ E      +   Q+   +L E    E++Y H       +GL A
Sbjct: 194 DESIHGVFTGLDAQSLRNELSESEKQRADQEMYKLLKELYDNEVSYTHLLYDD--IGL-A 250

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109
                Y+++  N+    +G EP F+  E NP   +   +D   +  +FF
Sbjct: 251 EDVLNYVKYNGNKALSNLGFEPYFEEREFNPI--IENALDTTTKNHDFF 297


>gi|27467432|ref|NP_764069.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis ATCC 12228]
 gi|57866341|ref|YP_187991.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis RP62A]
 gi|251810165|ref|ZP_04824638.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|282875687|ref|ZP_06284558.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           epidermidis SK135]
 gi|293368193|ref|ZP_06614822.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus
           epidermidis M23864:W2(grey)]
 gi|27314975|gb|AAO04111.1|AE016745_210 ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
           epidermidis ATCC 12228]
 gi|57636999|gb|AAW53787.1| ribonucleoside-diphosphate reductase 2, beta subunit
           [Staphylococcus epidermidis RP62A]
 gi|251806217|gb|EES58874.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|281295714|gb|EFA88237.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           epidermidis SK135]
 gi|291317616|gb|EFE58033.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus
           epidermidis M23864:W2(grey)]
 gi|329723280|gb|EGG59810.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           epidermidis VCU144]
 gi|329736749|gb|EGG73014.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           epidermidis VCU028]
 gi|329737954|gb|EGG74178.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           epidermidis VCU045]
          Length = 322

 Score = 51.6 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 7/109 (6%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DES+H  F       ++ E      ++  Q+   +L+E    E++Y H       +GL A
Sbjct: 194 DESIHGVFTGLDAQSLRNELSESEKQKADQEMYKLLNELYDNEVSYTHLLYDD--IGL-A 250

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109
                Y+++  N+    +G EP F+  E NP   +   +D   +  +FF
Sbjct: 251 EDVLNYVRYNGNKALSNLGFEPYFEEREFNPI--IENALDTSTKNHDFF 297


>gi|41409193|ref|NP_962029.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           avium subsp. paratuberculosis K-10]
 gi|41398013|gb|AAS05643.1| NrdG [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 324

 Score = 51.6 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E+ Y  +      VGL
Sbjct: 194 IRDEAVHGYYIGYKYQRGLALVDDAKRQELKDYTYELLFELYDNEVEYTQDLY--DEVGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 308

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 309 YVIGKAVVTEDEDWD 323


>gi|242372965|ref|ZP_04818539.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis M23864:W1]
 gi|242349291|gb|EES40892.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis M23864:W1]
          Length = 322

 Score = 51.6 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DES+H  F       ++ E      ++  Q+   +L+E    E++Y H       +GL  
Sbjct: 194 DESIHGVFTGLDAQSLRNELSESEKQKADQEMYKLLNELYDNEVSYTHLLYDD--IGLT- 250

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109
                Y+++  N+    +G EP F+  E NP   +   +D   +  +FF
Sbjct: 251 EDVLNYVRYNGNKALSNLGFEPYFEEREFNPI--IENALDTSTKNHDFF 297


>gi|118465359|ref|YP_883075.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           avium 104]
 gi|118166646|gb|ABK67543.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           avium 104]
          Length = 324

 Score = 51.6 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E+ Y  +      VGL
Sbjct: 194 IRDEAVHGYYIGYKYQRGLALVDDAKRQELKDYTYELLFELYDNEVEYTQDLY--DEVGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 308

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 309 YVIGKAVVTEDEDWD 323


>gi|242242101|ref|ZP_04796546.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis W23144]
 gi|242234414|gb|EES36726.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis W23144]
 gi|319401190|gb|EFV89405.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus
           epidermidis FRI909]
          Length = 322

 Score = 51.6 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 7/109 (6%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DES+H  F       ++ E      ++  Q+   +L+E    E++Y H       +GL A
Sbjct: 194 DESIHGVFTGLDAQSLRNELSESEKQKADQEMYKLLNELYDNEVSYTHLLYDD--IGL-A 250

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109
                Y+++  N+    +G EP F+  E NP   +   +D   +  +FF
Sbjct: 251 DDVLNYVRYNGNKALSNLGFEPYFEEREFNPI--IENALDTSTKNHDFF 297


>gi|329945141|ref|ZP_08293009.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
           oral taxon 170 str. F0386]
 gi|328529340|gb|EGF56255.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
           oral taxon 170 str. F0386]
          Length = 324

 Score = 51.6 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 49/135 (36%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          E+      E +  +  +L E    E  Y  +      +GL
Sbjct: 194 IRDEAVHGYYIGYKYQLAVRESSPERQAELKDYTFELLMELYDNEEQYTEDLY--DELGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPADAVDVNPAILASLSPNADENH--DFFSGSGSS 308

Query: 116 YQQGAE-----LKWD 125
           Y  G         WD
Sbjct: 309 YVMGTAEATQDEDWD 323


>gi|257870055|ref|ZP_05649708.1| ribonucleoside-diphosphate reductase [Enterococcus gallinarum EG2]
 gi|257804219|gb|EEV33041.1| ribonucleoside-diphosphate reductase [Enterococcus gallinarum EG2]
          Length = 322

 Score = 51.6 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    +  +     +L+E    E  Y  E      +G 
Sbjct: 189 IRDESVHGTYIGYKFQLGFNELPEEEQQRLKDWMYDLLYELYENEERYTEELY--DAIGW 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 247 T-EEVKTFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 296


>gi|223043034|ref|ZP_03613082.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           capitis SK14]
 gi|314933044|ref|ZP_07840410.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           caprae C87]
 gi|222443888|gb|EEE49985.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           capitis SK14]
 gi|313654363|gb|EFS18119.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           caprae C87]
          Length = 322

 Score = 51.6 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DES+H  F       ++ E      ++  Q+   +L+E    E++Y H       +GL  
Sbjct: 194 DESIHGVFTGLDAQSLRNELSESEKQKADQEMYKLLNELYDNEVSYTHLLYDD--IGLT- 250

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109
                Y+++  N+    +G EP F+  E NP   +   +D   +  +FF
Sbjct: 251 EDVLNYVRYNGNKALSNLGFEPYFEEREFNPI--IENALDTSTKNHDFF 297


>gi|84997706|ref|XP_953574.1| ribonucleoside reductase [Theileria annulata]
 gi|65304571|emb|CAI72896.1| ribonucleoside reductase, putative [Theileria annulata]
          Length = 332

 Score = 51.6 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 43/108 (39%), Gaps = 11/108 (10%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           D  +H  F       ++        K  + +   ++ +A  LE  +  +     F  L+ 
Sbjct: 215 DRIIHTRFAHCTFRLLQ-------NKMLESEVLEIIKQALKLEYQFILQYFTIQFFNLST 267

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI---DLKKEKN 107
              + Y+++I N      G + L+  +E    W++  I   +++K+ N
Sbjct: 268 NVIKSYLEWIGNNILLVCGYKTLY-TSEFDIDWLNHPIIDLNIQKQTN 314


>gi|118469232|ref|YP_886661.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           smegmatis str. MC2 155]
 gi|118469934|ref|YP_885432.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           smegmatis str. MC2 155]
 gi|118170519|gb|ABK71415.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           smegmatis str. MC2 155]
 gi|118171221|gb|ABK72117.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           smegmatis str. MC2 155]
          Length = 324

 Score = 51.6 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E+ Y  +      VGL
Sbjct: 194 IRDEAVHGYYIGYKYQRGLALVDEEKKQELKDYTYELLFELYDNEVEYTQDLY--DSVGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   E   NP     ++   D     +FF    + 
Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALAPNADENH--DFFSGSGSS 308

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 309 YVIGKAVNTEDEDWD 323


>gi|99080359|ref|YP_612513.1| ribonucleotide-diphosphate reductase subunit beta [Ruegeria sp.
           TM1040]
 gi|99036639|gb|ABF63251.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Ruegeria sp. TM1040]
          Length = 338

 Score = 51.2 bits (122), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 49/131 (37%), Gaps = 10/131 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          KE +  +  +L +   +E  Y  +      +GL
Sbjct: 208 IRDEAIHGYYIGYKFQRGLERASEAERKELKDFAFGLLFDLYDIEARYTEQLY--DGLGL 265

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEY 116
                + ++ + AN+    +G E LF       NP   M+ +     E  +FF    + Y
Sbjct: 266 T-EDVKNFLHYNANKALQNLGFEALFPEETCRVNPAI-MAALSPGSDENHDFFSGSGSSY 323

Query: 117 Q--QGAELKWD 125
              +    + D
Sbjct: 324 VIGKAVATEDD 334


>gi|226305840|ref|YP_002765800.1| ribonucleoside-diphosphate reductase beta chain [Rhodococcus
           erythropolis PR4]
 gi|229493405|ref|ZP_04387194.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodococcus
           erythropolis SK121]
 gi|226184957|dbj|BAH33061.1| ribonucleoside-diphosphate reductase beta chain [Rhodococcus
           erythropolis PR4]
 gi|229319721|gb|EEN85553.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodococcus
           erythropolis SK121]
          Length = 321

 Score = 51.2 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  +      VGL
Sbjct: 191 IRDEAVHGYYIGYKYQKGLEQLTEAEREELKNYTFELLFELYENEVDYTQDLY--DGVGL 248

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+  + +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 249 T-EDVKKFLRYNANKALNNLGYEGLFPKDETDVNPAILSALSPNADENH--DFFSGSGSS 305

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 306 YVIGKAVNTEDDDWD 320


>gi|325291517|ref|YP_004277381.1| ribonucleotide-diphosphate reductase subunit beta [Agrobacterium
           sp. H13-3]
 gi|325059370|gb|ADY63061.1| ribonucleotide-diphosphate reductase subunit beta [Agrobacterium
           sp. H13-3]
          Length = 324

 Score = 51.2 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E  Y  +      VGL
Sbjct: 194 IRDEAVHGYYIGYKFQRALERLGEAEKQEIKDFAFDLLLELYDNEAKYTQDLY--DGVGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                +Q++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKQFLHYNANKALMNLGYEALFPPEACRVNPAILSALSPNADENH--DFFSGSGSS 308

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 309 YVIGKAVATEDEDWD 323


>gi|240169547|ref|ZP_04748206.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
           kansasii ATCC 12478]
          Length = 320

 Score = 51.2 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 50/127 (39%), Gaps = 10/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +       +   E +  +  +L E    E+ Y  +      VGL
Sbjct: 190 IRDEAVHGYYIGYKFQRGLALVDEVKRAELKDYTYELLFELYDNEVEYTQDLY--DEVGL 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 248 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 304

Query: 116 YQQGAEL 122
           Y  G  +
Sbjct: 305 YVIGKAV 311


>gi|269957220|ref|YP_003327009.1| Ribonucleoside-diphosphate reductase [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269305901|gb|ACZ31451.1| Ribonucleoside-diphosphate reductase [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 326

 Score = 51.2 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +           E +  +  +L E    E+ Y      +  +GL
Sbjct: 196 IRDEAVHGYYIGYKFQKGLALESQERQDEIKAYTFELLFELYENEVEYTEALYGE--LGL 253

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 254 T-EDVKKFLRYNANKALMNLGYEALFPKEETDVNPAILAALSPNADENH--DFFSGSGSS 310

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 311 YVIGKAVDTTDDDWD 325


>gi|163791218|ref|ZP_02185634.1| ribonucleotide-diphosphate [Carnobacterium sp. AT7]
 gi|159873488|gb|EDP67576.1| ribonucleotide-diphosphate [Carnobacterium sp. AT7]
          Length = 320

 Score = 51.2 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 45/111 (40%), Gaps = 5/111 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          + P    +E +  +  +L +    E+ YA        +G 
Sbjct: 188 LRDESVHGTYIGYKFQIAYNQLPDNEKEEMKNWTYELLFKLYQNEVKYAEYLY--DEIGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  T N      M+ +       +FF
Sbjct: 246 T-ERVKVFLRYNANKALQNLGFDPLFPDTANDVDPVIMNGISTGTSNHDFF 295


>gi|225021562|ref|ZP_03710754.1| hypothetical protein CORMATOL_01583 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945553|gb|EEG26762.1| hypothetical protein CORMATOL_01583 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 330

 Score = 51.2 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 3/90 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      Q   +      +E ++ +  +L+E    EIAY  +      +G 
Sbjct: 200 IRDEAVHGYYIGYKFQQALAKESPARQEELKEYTFDVLYELYENEIAYTEDLY--DPLGW 257

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90
                ++++++ AN+  + +G E LF   E
Sbjct: 258 T-EDVKRFLRYNANKALNNLGYEALFPADE 286


>gi|305681191|ref|ZP_07403998.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           matruchotii ATCC 14266]
 gi|305659396|gb|EFM48896.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           matruchotii ATCC 14266]
          Length = 330

 Score = 51.2 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 3/90 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      Q   +      +E ++ +  +L+E    EIAY  +      +G 
Sbjct: 200 IRDEAVHGYYIGYKFQQALAKESPARQEELKEYTFDVLYELYENEIAYTEDLY--DPLGW 257

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90
                ++++++ AN+  + +G E LF   E
Sbjct: 258 T-EDVKRFLRYNANKALNNLGYEALFPADE 286


>gi|323479608|gb|ADX79047.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis 62]
          Length = 321

 Score = 50.8 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P     + +     +L+E    E  Y  E      +G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQDKLKDWMYNLLYELYENEEHYTEELYDD--LGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G++PLF  T    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGMDPLFADTANDVNPIV-MNGISTGTSNHDFF 295


>gi|159184148|ref|NP_353105.2| ribonucleotide-diphosphate reductase subunit beta [Agrobacterium
           tumefaciens str. C58]
 gi|159139483|gb|AAK85890.2| ribonucleoside-diphosphate reductase 2 beta chain [Agrobacterium
           tumefaciens str. C58]
          Length = 324

 Score = 50.8 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E  Y  +      VGL
Sbjct: 194 IRDEAVHGYYIGYKFQRALDRLGEAQRQEIKDFAFDLLLELYDNEAKYTEDLY--DGVGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                +Q++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKQFLHYNANKALMNLGYEALFPAEACRVNPAILSALSPNADENH--DFFSGSGSS 308

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 309 YVIGKAVATEDEDWD 323


>gi|227496669|ref|ZP_03926945.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces
           urogenitalis DSM 15434]
 gi|226833817|gb|EEH66200.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces
           urogenitalis DSM 15434]
          Length = 324

 Score = 50.8 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 49/135 (36%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          E+      E +  +  +L E    E  Y  +      +GL
Sbjct: 194 IRDEAVHGYYIGYKYQLAVRESSPQRQAELKDYTFDLLMELYDNEEQYTEDLY--DELGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPADAVDVNPAILASLSPNADENH--DFFSGSGSS 308

Query: 116 YQQGAE-----LKWD 125
           Y  G         WD
Sbjct: 309 YVIGTAEATEDEDWD 323


>gi|307944765|ref|ZP_07660103.1| ribonucleoside-diphosphate reductase, beta subunit [Roseibium sp.
           TrichSKD4]
 gi|307771979|gb|EFO31202.1| ribonucleoside-diphosphate reductase, beta subunit [Roseibium sp.
           TrichSKD4]
          Length = 329

 Score = 50.8 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 57/134 (42%), Gaps = 13/134 (9%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +++        +E +  + +++ +   +E  Y  E++  G  GL
Sbjct: 199 IRDEAVHGYYIGYKFQRMQETLSEAERQEIKDFAFSLMFDLYEIEGKY-TESLYDGV-GL 256

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVI-DLKKEKNFFETRVTEY 116
                + ++ + AN+    +G E LF  +    NP   M+ +  +  +  +FF    + Y
Sbjct: 257 T-EDVKHFLHYNANKALMNLGYEALFPDSVCQVNPAI-MAALSPNADENHDFFSGSGSSY 314

Query: 117 QQGAEL-----KWD 125
             G  +      WD
Sbjct: 315 VIGKAVATEDEDWD 328


>gi|319944853|ref|ZP_08019115.1| ribonucleotide-diphosphate reductase subunit beta [Lautropia
           mirabilis ATCC 51599]
 gi|319741423|gb|EFV93848.1| ribonucleotide-diphosphate reductase subunit beta [Lautropia
           mirabilis ATCC 51599]
          Length = 333

 Score = 50.8 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 50/134 (37%), Gaps = 14/134 (10%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +     P       +  + ++L E   +E  Y  E   +  +GL
Sbjct: 204 IRDEAVHGYYIGYKFQRALARLPEADQARLKDFAFSLLFELYEVEALYTEELYDR--IGL 261

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEY 116
                + ++ + AN+    +G E LF       NP   +   +    E  +FF    + Y
Sbjct: 262 T-EDVKAFLHYNANKALQNLGYEALFPPAACEVNPA--ILSALSPDSENHDFFSGSGSSY 318

Query: 117 QQGAEL-----KWD 125
             G  +      WD
Sbjct: 319 VIGKAVATEDEDWD 332


>gi|283457964|ref|YP_003362570.1| ribonucleotide reductase subunit beta [Rothia mucilaginosa DY-18]
 gi|283133985|dbj|BAI64750.1| ribonucleotide reductase, beta subunit [Rothia mucilaginosa DY-18]
          Length = 325

 Score = 50.8 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 58/133 (43%), Gaps = 11/133 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      Q   +       E ++ +  +L+E    E+AY H ++  G  G 
Sbjct: 195 IRDEAVHGYYIGYKFQQGLAKESAERQAELKEYTFNLLYELYENEVAYTH-SLYDGV-GW 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKN--FFETRVTEYQ 117
           +    ++++ + AN+    +G EP+F  +  N  P +   +    ++N  FF    + Y 
Sbjct: 253 S-EDVKKFLHYNANKALMNLGYEPMFPASVTNVSPAILSALSPNADENHDFFSGSGSSYV 311

Query: 118 QGAEL-----KWD 125
            G  +      WD
Sbjct: 312 IGKAVNTEDEDWD 324


>gi|227494314|ref|ZP_03924630.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces
           coleocanis DSM 15436]
 gi|226832048|gb|EEH64431.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces
           coleocanis DSM 15436]
          Length = 322

 Score = 50.8 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 10/124 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          E+     +E +  +  +L+E    E  +  +      +GL
Sbjct: 192 IRDEAVHGYYIGYKYQLGVRESSEARQQELKDYTFDLLYELYDNEEQFTEDLY--DPLGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 250 T-EDVKKFLRYNANKALMNLGYEALFPAESCDVNPAILASLSPNADENH--DFFSGSGSS 306

Query: 116 YQQG 119
           Y  G
Sbjct: 307 YVIG 310


>gi|325675841|ref|ZP_08155525.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus equi
           ATCC 33707]
 gi|325553812|gb|EGD23490.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus equi
           ATCC 33707]
          Length = 335

 Score = 50.8 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E+ Y  +      VGL
Sbjct: 205 IRDEAVHGYYIGYKYQRGLERVTEAEREELKNYTFELLFELYDNEVEYTQDLY--DEVGL 262

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 263 T-EDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENH--DFFSGSGSS 319

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 320 YVIGKAVNTEDDDWD 334


>gi|3068719|gb|AAC14561.1| ribonucleoside diphosphate reductase small subunit [Corynebacterium
           ammoniagenes]
          Length = 329

 Score = 50.8 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 55/135 (40%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +      Q   +      +E++  +  ++++    EI Y  +      +G 
Sbjct: 199 IRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENEIEYTEDIYDD--LGW 256

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+  + +G E LF   E   +P     +S   D     +FF    + 
Sbjct: 257 T-EDVKRFLRYNANKALNNLGYEGLFPTDETKVSPAILSSLSPNADENH--DFFSGSGSS 313

Query: 116 YQQG-----AELKWD 125
           Y  G      +  WD
Sbjct: 314 YVIGKAEDTTDDDWD 328


>gi|18158911|pdb|1KGN|A Chain A, R2f From Corynebacterium Ammoniagenes In Its Oxidised, Fe
           Containing, Form
 gi|18158912|pdb|1KGN|B Chain B, R2f From Corynebacterium Ammoniagenes In Its Oxidised, Fe
           Containing, Form
 gi|18158913|pdb|1KGN|C Chain C, R2f From Corynebacterium Ammoniagenes In Its Oxidised, Fe
           Containing, Form
 gi|18158914|pdb|1KGN|D Chain D, R2f From Corynebacterium Ammoniagenes In Its Oxidised, Fe
           Containing, Form
 gi|18158915|pdb|1KGO|A Chain A, R2f From Corynebacterium Ammoniagenes In Its Reduced, Fe
           Containing, Form
 gi|18158916|pdb|1KGO|B Chain B, R2f From Corynebacterium Ammoniagenes In Its Reduced, Fe
           Containing, Form
 gi|18158917|pdb|1KGO|C Chain C, R2f From Corynebacterium Ammoniagenes In Its Reduced, Fe
           Containing, Form
 gi|18158918|pdb|1KGO|D Chain D, R2f From Corynebacterium Ammoniagenes In Its Reduced, Fe
           Containing, Form
 gi|18158919|pdb|1KGP|A Chain A, R2f From Corynebacterium Ammoniagenes In Its Mn
           Substituted Form
 gi|18158920|pdb|1KGP|B Chain B, R2f From Corynebacterium Ammoniagenes In Its Mn
           Substituted Form
 gi|18158921|pdb|1KGP|C Chain C, R2f From Corynebacterium Ammoniagenes In Its Mn
           Substituted Form
 gi|18158922|pdb|1KGP|D Chain D, R2f From Corynebacterium Ammoniagenes In Its Mn
           Substituted Form
 gi|48425146|pdb|1OQU|A Chain A, A Protein Coordinated Tri-Nuclear Fe Complex Formed During
           Soaking Of Crystals Of The Ribonucleotide Reductase R2f
           Protein From Corynebacterium Ammoniagenes
 gi|48425147|pdb|1OQU|B Chain B, A Protein Coordinated Tri-Nuclear Fe Complex Formed During
           Soaking Of Crystals Of The Ribonucleotide Reductase R2f
           Protein From Corynebacterium Ammoniagenes
 gi|48425148|pdb|1OQU|C Chain C, A Protein Coordinated Tri-Nuclear Fe Complex Formed During
           Soaking Of Crystals Of The Ribonucleotide Reductase R2f
           Protein From Corynebacterium Ammoniagenes
 gi|48425149|pdb|1OQU|D Chain D, A Protein Coordinated Tri-Nuclear Fe Complex Formed During
           Soaking Of Crystals Of The Ribonucleotide Reductase R2f
           Protein From Corynebacterium Ammoniagenes
 gi|193506844|pdb|3DHZ|A Chain A, Apo (Iron Free) Structure Of C. Ammoniagenes R2 Protein
 gi|193506845|pdb|3DHZ|B Chain B, Apo (Iron Free) Structure Of C. Ammoniagenes R2 Protein
 gi|3077614|emb|CAA70766.1| ribonucleotide reductase subunit R2F [Corynebacterium ammoniagenes]
          Length = 329

 Score = 50.4 bits (120), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 55/135 (40%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +      Q   +      +E++  +  ++++    EI Y  +      +G 
Sbjct: 199 IRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENEIEYTEDIYDD--LGW 256

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+  + +G E LF   E   +P     +S   D     +FF    + 
Sbjct: 257 T-EDVKRFLRYNANKALNNLGYEGLFPTDETKVSPAILSSLSPNADENH--DFFSGSGSS 313

Query: 116 YQQG-----AELKWD 125
           Y  G      +  WD
Sbjct: 314 YVIGKAEDTTDDDWD 328


>gi|289809666|ref|ZP_06540295.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 74

 Score = 50.4 bits (120), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 4/67 (5%)

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTEY---QQ 118
               QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ Y   Q 
Sbjct: 1   DILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQI 60

Query: 119 GAELKWD 125
            +E+  D
Sbjct: 61  DSEVDTD 67


>gi|304445906|pdb|3MJO|A Chain A, Small Subunit (R2f) Of Native Ribonucleotide Reductase
           From Corynebacterium Ammoniagenes
 gi|304445907|pdb|3MJO|B Chain B, Small Subunit (R2f) Of Native Ribonucleotide Reductase
           From Corynebacterium Ammoniagenes
          Length = 296

 Score = 50.4 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 41/90 (45%), Gaps = 3/90 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +      Q   +      +E++  +  ++++    EI Y  +      +G 
Sbjct: 198 IRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENEIEYTEDIYDD--LGW 255

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90
                ++++++ AN+  + +G E LF   E
Sbjct: 256 T-EDVKRFLRYNANKALNNLGYEGLFPTDE 284


>gi|296128314|ref|YP_003635564.1| Ribonucleoside-diphosphate reductase [Cellulomonas flavigena DSM
           20109]
 gi|296020129|gb|ADG73365.1| Ribonucleoside-diphosphate reductase [Cellulomonas flavigena DSM
           20109]
          Length = 326

 Score = 50.4 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +           E +  +  +L E    E+ Y  +      +GL
Sbjct: 196 IRDEAVHGYYIGYKFQKGLERVSEAERAELKDYTFNLLFELYDNEVEYTQDLY--DELGL 253

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 254 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILAALSPNADENH--DFFSGSGSS 310

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 311 YVIGKAVNTEDDDWD 325


>gi|312140539|ref|YP_004007875.1| ribonucleoside-diphosphate reductase nrdf [Rhodococcus equi 103S]
 gi|311889878|emb|CBH49195.1| ribonucleoside-diphosphate reductase NrdF [Rhodococcus equi 103S]
          Length = 329

 Score = 50.4 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E+ Y  +      VGL
Sbjct: 199 IRDEAVHGYYIGYKYQRGLERVTEAEREELKNYTFELLFELYDNEVEYTQDLY--DEVGL 256

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 257 T-EDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENH--DFFSGSGSS 313

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 314 YVIGKAVNTEDDDWD 328


>gi|308177564|ref|YP_003916970.1| ribonucleoside-diphosphate reductase subunit beta [Arthrobacter
           arilaitensis Re117]
 gi|307745027|emb|CBT75999.1| ribonucleoside-diphosphate reductase beta chain [Arthrobacter
           arilaitensis Re117]
          Length = 324

 Score = 50.4 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 55/133 (41%), Gaps = 11/133 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +++E    E+ Y H+      VGL
Sbjct: 194 IRDEAVHGYYIGYKFQKGLENETEERKQELKDYTFELMYELYENEVQYTHDLY--DPVGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKN--FFETRVTEYQ 117
           +    ++++ + AN+    +G E +F  T  +  P +   +    ++N  FF    + Y 
Sbjct: 252 S-EDVKKFLHYNANKALMNLGYEAMFPSTVTDVSPAILAALSPNADENHDFFSGSGSSYV 310

Query: 118 QGAEL-----KWD 125
            G  +      WD
Sbjct: 311 IGKAVNTEDEDWD 323


>gi|254489413|ref|ZP_05102616.1| ribonucleoside-diphosphate reductase, beta subunit [Roseobacter sp.
           GAI101]
 gi|214041920|gb|EEB82560.1| ribonucleoside-diphosphate reductase, beta subunit [Roseobacter sp.
           GAI101]
          Length = 324

 Score = 50.4 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 50/134 (37%), Gaps = 14/134 (10%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   + P       +  + +++ +   +E  Y  E      +GL
Sbjct: 195 IRDEAIHGYYIGYKFQRATEQLPQADRDALKDFAFSLMFDLYEIEAHYTAELYDD--LGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEK-NFFETRVTEY 116
                + ++ + AN+    +G E LF       NP   +   +    E  +FF    + Y
Sbjct: 253 T-EDVKAFLHYNANKALQNLGYEALFPAQVCEVNPA--ILAALSPDSENHDFFSGSGSSY 309

Query: 117 QQGAEL-----KWD 125
             G  +      WD
Sbjct: 310 VIGKAVATEDEDWD 323


>gi|253990649|ref|YP_003042005.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253782099|emb|CAQ85263.1| ribonucleoside-diphosphate reductase 2 beta chain [Photorhabdus
           asymbiotica]
          Length = 319

 Score = 50.4 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 55/142 (38%), Gaps = 29/142 (20%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      Q   + P+   KE +  + ++L +    EI Y  +      VG 
Sbjct: 189 IRDEAIHGYYIGYKFQQSLNKYPNSEKKEIKDFTFSLLFDLYENEIKYTEDLY--DIVGW 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL------------KKEKNF 108
                ++++ + AN+    +G E LF         +SE+ D+             +  +F
Sbjct: 247 T-EDVKKFLHYNANKALMNLGYEALF---------LSEMTDVSPAILSALSPGANENHDF 296

Query: 109 FETRVTEYQQGAEL-----KWD 125
           F    + Y  G  +      WD
Sbjct: 297 FSGSGSSYVIGKAVNTEDEDWD 318


>gi|313884792|ref|ZP_07818546.1| ribonucleoside-diphosphate reductase, beta subunit [Eremococcus
           coleocola ACS-139-V-Col8]
 gi|312619991|gb|EFR31426.1| ribonucleoside-diphosphate reductase, beta subunit [Eremococcus
           coleocola ACS-139-V-Col8]
          Length = 363

 Score = 50.0 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 40/112 (35%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +                 +E +Q    +  E    E  Y         +G 
Sbjct: 189 LRDESVHGTYIGYKFQLGYNALSETDQEELKQWVFNLCFELYSNEEKYTSYIY--DELGW 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 247 T-EEVNTFVRYNANKALQNLGFDPLFADTAEDVNPIV-MNGISTGTSNHDFF 296


>gi|269861603|ref|XP_002650501.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220066034|gb|EED43552.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 53

 Score = 50.0 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)

Query: 88  YTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +  NPF +M E I L+ + NFFE R   YQ+G
Sbjct: 7   HVSNPFDFM-ENISLQGKTNFFERREANYQKG 37


>gi|308187851|ref|YP_003931982.1| ribonucleoside-diphosphate reductase beta chain [Pantoea vagans
           C9-1]
 gi|308058361|gb|ADO10533.1| ribonucleoside-diphosphate reductase beta chain [Pantoea vagans
           C9-1]
          Length = 326

 Score = 50.0 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 48/128 (37%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      Q       L  +E QQ +  +L      E+AY         VG 
Sbjct: 196 IRDEAVHGYYIGYKYQQALASADDLRREELQQFAYDLLLALYENEVAYTEALYGD--VGW 253

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115
                + ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 254 -VDEVKTFLHYNANKALMNLGYEALFPAELTAVNPAILSALSPNADENH--DFFSGSGSS 310

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 311 YVMGKAVE 318


>gi|209877300|ref|XP_002140092.1| ribonucleoside-diphosphate reductase beta subunit family protein
           [Cryptosporidium muris RN66]
 gi|209555698|gb|EEA05743.1| ribonucleoside-diphosphate reductase beta subunit family protein
           [Cryptosporidium muris RN66]
          Length = 357

 Score = 50.0 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 35/100 (35%), Gaps = 11/100 (11%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE     F    I +       + TK   +   +ML  A  +E  +         + + 
Sbjct: 226 RDELFQAEF-CLSIAR------SMKTKPSNEYIISMLENAITIEKGFIFSIFNLEILEIP 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 101
                 Y+ F A+    ++     F  + NPF   SE+I 
Sbjct: 279 REDIVAYLLFSADEILVELKYPRHFNVS-NPF---SELIS 314


>gi|70926559|ref|XP_735800.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56509782|emb|CAH82994.1| hypothetical protein PC300265.00.0 [Plasmodium chabaudi chabaudi]
          Length = 106

 Score = 50.0 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 29/72 (40%), Gaps = 2/72 (2%)

Query: 24 HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE 83
          HL  K  + +       A  LE  +  E +    + +     +Q++Q++A+     +   
Sbjct: 2  HLNNK-LKYEVLDYFKTAVDLEYNFCVEMLDFDSLKITKDQVKQFLQYLADTMLVNLKYS 60

Query: 84 PLFKYTENPFPW 95
            +  ++ PF W
Sbjct: 61 KHYN-SKYPFTW 71


>gi|254471227|ref|ZP_05084629.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudovibrio
           sp. JE062]
 gi|211959373|gb|EEA94571.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudovibrio
           sp. JE062]
          Length = 325

 Score = 50.0 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 49/135 (36%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +           E +  + T+L +   LE  Y  +      +GL
Sbjct: 195 IRDEAVHGYYIGYKFQRGLERLSEAERTEIKDFAFTLLFDLYDLETKYTEDLY--DPLGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115
                + ++ +  N+    +G E LF  T    NP     +S   D     +FF    + 
Sbjct: 253 T-EDVKHFLHYNGNKALQNLGFEGLFPETICQVNPAIMASLSPNADENH--DFFSGSGSS 309

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 310 YVIGKAVATEDEDWD 324


>gi|255327220|ref|ZP_05368295.1| ribonucleoside-diphosphate reductase, beta subunit [Rothia
           mucilaginosa ATCC 25296]
 gi|255295838|gb|EET75180.1| ribonucleoside-diphosphate reductase, beta subunit [Rothia
           mucilaginosa ATCC 25296]
          Length = 325

 Score = 50.0 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 58/133 (43%), Gaps = 11/133 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +       E ++ +  +L+E    E+AY H ++  G  G 
Sbjct: 195 IRDEAVHGYYIGYKFQRGLAKESAERQAELKEYTFNLLYELYENEVAYTH-SLYDGV-GW 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKN--FFETRVTEYQ 117
           +    ++++ + AN+    +G EP+F  T  N  P +   +    ++N  FF    + Y 
Sbjct: 253 S-EDVKKFLHYNANKALMNLGYEPMFPATVTNVSPAILSALSPNADENHDFFSGSGSSYV 311

Query: 118 QGAEL-----KWD 125
            G  +      WD
Sbjct: 312 IGKAVNTEDEDWD 324


>gi|330941351|gb|EGH44203.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 317

 Score = 50.0 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/27 (88%), Positives = 26/27 (96%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWT 27
           +RDES+HLNFGIDVINQIKIENPHLW 
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWD 317


>gi|332671991|ref|YP_004454999.1| ribonucleoside-diphosphate reductase [Cellulomonas fimi ATCC 484]
 gi|332341029|gb|AEE47612.1| Ribonucleoside-diphosphate reductase [Cellulomonas fimi ATCC 484]
          Length = 326

 Score = 50.0 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  +      VGL
Sbjct: 196 IRDEAVHGYYIGYKFQKGLEKLSPEERQELKDYTFELLFELYDNEVEYTQDLY--DGVGL 253

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 254 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--DFFSGSGSS 310

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 311 YVIGKAVNTEDEDWD 325


>gi|322372696|ref|ZP_08047232.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           sp. C150]
 gi|321277738|gb|EFX54807.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           sp. C150]
          Length = 319

 Score = 50.0 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    + F++    +L+E    E  Y   ++  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQESFREWMYDLLYELYENEELYTK-SLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDSANDVNPIV-MNGISTGTSNHDFF 295


>gi|259046997|ref|ZP_05737398.1| ribonucleoside-diphosphate reductase 2, beta subunit
           [Granulicatella adiacens ATCC 49175]
 gi|259036316|gb|EEW37571.1| ribonucleoside-diphosphate reductase 2, beta subunit
           [Granulicatella adiacens ATCC 49175]
          Length = 346

 Score = 50.0 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 5/111 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +      Q   E      +E +     +  E    E+ Y         VG 
Sbjct: 215 IRDESVHGTYTGYKFQQGYNELSEQEQEEMKMWVYNLCLELYQNEVKYTQSIY--DQVGW 272

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  T        M+ +       +FF
Sbjct: 273 T-EKVKVFIRYNANKALQNLGFDPLFPDTAEDVDPIVMNGISTGTSNHDFF 322


>gi|229818600|ref|YP_002880126.1| Ribonucleoside-diphosphate reductase [Beutenbergia cavernae DSM
           12333]
 gi|229564513|gb|ACQ78364.1| Ribonucleoside-diphosphate reductase [Beutenbergia cavernae DSM
           12333]
          Length = 326

 Score = 50.0 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E+ Y  +      VGL
Sbjct: 196 IRDEAVHGYYIGYKFQRGLEALAPEQREEIKSYTYELLFELYENEVQYTEDLY--DEVGL 253

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 254 T-EDVKKFLRYNANKALMNLGYEALFPKDETDVNPAILAALSPNADENH--DFFSGSGSS 310

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 311 YVIGKAVNTEDDDWD 325


>gi|229823057|ref|ZP_04449126.1| hypothetical protein GCWU000282_00352 [Catonella morbi ATCC 51271]
 gi|229787496|gb|EEP23610.1| hypothetical protein GCWU000282_00352 [Catonella morbi ATCC 51271]
          Length = 336

 Score = 49.6 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 5/111 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P     E +     +  +    E  Y         VG 
Sbjct: 205 IRDESVHGTYTGYKFQLGYNELPEDQQAELKMWVYELCMDLYQNEAKYTQSLY--DQVGW 262

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  T        M+ +       +FF
Sbjct: 263 T-EKVKVFIRYNANKALQNLGFDPLFPDTAEDVDPIVMNGISTGTSNHDFF 312


>gi|317506846|ref|ZP_07964618.1| ribonucleotide reductase [Segniliparus rugosus ATCC BAA-974]
 gi|316254774|gb|EFV14072.1| ribonucleotide reductase [Segniliparus rugosus ATCC BAA-974]
          Length = 332

 Score = 49.6 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +    +     +E +  + ++L +    E+ Y  +      VGL
Sbjct: 202 IRDEAVHGYYIGYKYQRGLAASTEQRREELKDFTFSLLFDLYENEVEYTQDLY--DPVGL 259

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+  + +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 260 T-EDVKKFLRYNANKALNNLGYEGLFPKDETSVNPAILSALSPNADENH--DFFSGSGSS 316

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 317 YVIGKAVATEDEDWD 331


>gi|224475873|ref|YP_002633479.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           carnosus subsp. carnosus TM300]
 gi|222420480|emb|CAL27294.1| ribonucleoside-diphosphate reductase beta chain [Staphylococcus
           carnosus subsp. carnosus TM300]
          Length = 324

 Score = 49.6 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 7/109 (6%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DES+H  F       ++ E      +   Q    +L E    E++Y H+      +GL A
Sbjct: 194 DESIHGVFTGLDAQHLRNELSENEKQRADQHMYKLLEELYKNEVSYTHKLYDD--IGL-A 250

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109
                Y+++  N+    +G EP F+  E NP   +   +D   +  +FF
Sbjct: 251 EDVLNYVRYNGNKALSNLGFEPYFEEREFNPI--IENALDTSTKNHDFF 297


>gi|327489434|gb|EGF21227.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK1058]
          Length = 319

 Score = 49.6 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y         VG 
Sbjct: 188 IRDESVHGTYIGYKFQLAFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLY--DTVGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|5230837|gb|AAD41037.1|AF112536_1 ribonucleotide reductase beta-chain [Corynebacterium glutamicum]
          Length = 334

 Score = 49.6 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 54/132 (40%), Gaps = 12/132 (9%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E ++ +  +L++    E  Y+ +      +G 
Sbjct: 204 IRDEAVHGYYIGYKYQKAVAKETPERQEELKEYTFDLLYDLYDNETQYSEDLYDD--LGW 261

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----NPFPWMSEVIDLKKEKNFFETRVTE 115
                ++++++IAN+  + +G E LF   E     N    +S   D     +FF    + 
Sbjct: 262 T-EDVKRFLRYIANKALNNLGYEGLFPADETKVSPNILSALSPNADENH--DFFSGSGSS 318

Query: 116 YQ--QGAELKWD 125
           Y   +    + D
Sbjct: 319 YVIGKAENTEDD 330


>gi|296118681|ref|ZP_06837257.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           ammoniagenes DSM 20306]
 gi|295968170|gb|EFG81419.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           ammoniagenes DSM 20306]
          Length = 329

 Score = 49.6 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 55/135 (40%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +      Q   +      +E++  +  ++++    E+ Y  +      +G 
Sbjct: 199 IRDESVHGYYIGYKYQQGVKKLSEEKQQEYKDYTFDLMYDLYENELEYTEDIYDD--LGW 256

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+  + +G E LF   E   +P     +S   D     +FF    + 
Sbjct: 257 T-EDVKRFLRYNANKALNNLGYEGLFPTDETKVSPAILSSLSPNADENH--DFFSGSGSS 313

Query: 116 YQQGAELK-----WD 125
           Y  G   +     WD
Sbjct: 314 YVIGKAEETVDDDWD 328


>gi|209551073|ref|YP_002282990.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209536829|gb|ACI56764.1| Ribonucleoside-diphosphate reductase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 324

 Score = 49.6 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 50/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E  Y  E +  G  GL
Sbjct: 194 IRDEAVHGYYIGYKFQRGLERLSEERKQEIKDFAFDLLLELYDNEARY-TEALYDGV-GL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 308

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 309 YVIGKAVATEDEDWD 323


>gi|125717616|ref|YP_001034749.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK36]
 gi|323352633|ref|ZP_08087603.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis VMC66]
 gi|125497533|gb|ABN44199.1| Ribonucleoside-diphosphate reductase 2, beta subunit, putative
           [Streptococcus sanguinis SK36]
 gi|322121669|gb|EFX93415.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis VMC66]
 gi|325688330|gb|EGD30349.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK72]
 gi|325690076|gb|EGD32080.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK115]
 gi|332363056|gb|EGJ40843.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK355]
          Length = 319

 Score = 49.6 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y         VG 
Sbjct: 188 IRDESVHGTYIGYKFQLAFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLY--DTVGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|116670901|ref|YP_831834.1| ribonucleotide-diphosphate reductase subunit beta [Arthrobacter sp.
           FB24]
 gi|116611010|gb|ABK03734.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Arthrobacter sp. FB24]
          Length = 324

 Score = 49.6 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y H+      VGL
Sbjct: 194 IRDEAVHGYYIGYKFQKGLEKVSEEKRQEIKDYTFELLFELYENEVQYTHDLY--DSVGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   ++++ + AN+    +G E +F  +    NP     +S   D     +FF    + 
Sbjct: 252 -AEDVKKFLHYNANKALMNLGYEAMFPASVTDVNPAILSALSPNADENH--DFFSGSGSS 308

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 309 YVIGKAVNTEDEDWD 323


>gi|322412098|gb|EFY03006.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 319

 Score = 49.6 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    + F++    +L++    E  Y   T+  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEAEQETFREWMYDLLYQLYENEEDYTK-TLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|262283137|ref|ZP_06060904.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sp. 2_1_36FAA]
 gi|262261389|gb|EEY80088.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sp. 2_1_36FAA]
          Length = 319

 Score = 49.6 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y  ET+  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQEKLKEWMYDLLYTLYENEEGY-TETLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDTADDVNPIV-MNGISTGTSNHDFF 295


>gi|33340378|gb|AAQ14729.1|AF320576_197 putative ribonucleoside diphosphate reductase beta chain
           [Enterobacteria phage Felix 01]
          Length = 377

 Score = 49.6 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 9/121 (7%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQ---KSRTMLHEATLLEIAYAHETM--PKGF 57
           DE LH    I+V+ +   +    W K FQQ   + + +L E    E  +++      +  
Sbjct: 242 DEILHTKIDIEVLKETLRD--DEWQKAFQQILPEIKVILDEVVESEEKWSYYIFSEGRAV 299

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-PFPWMSEVIDLKKEKNF-FETRVTE 115
           VGLN     +++ + A       G+   F   +  P  +M + +++ KE+N   E +   
Sbjct: 300 VGLNTKLLHEWVYYNAAPLYDMFGIPRDFVAPKEPPLKYMIKKMEIDKEQNANQEQQNGA 359

Query: 116 Y 116
           Y
Sbjct: 360 Y 360


>gi|332361651|gb|EGJ39455.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK1056]
 gi|332365967|gb|EGJ43723.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK1059]
          Length = 319

 Score = 49.6 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y         VG 
Sbjct: 188 IRDESVHGTYIGYKFQLAFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLY--DTVGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|38707874|ref|NP_944994.1| Ribonucleoside triphosphate reductase, beta chain [Enterobacteria
           phage Felix 01]
 gi|238801854|ref|YP_002922904.1| ribonucleoside triphosphate reductase, beta chain [Enterobacteria
           phage WV8]
 gi|33340477|gb|AAQ14828.1| putative ribonucleoside diphosphate reductase beta chain
           [Enterobacteria phage Felix 01]
 gi|216263067|gb|ACJ71935.1| ribonucleoside triphosphate reductase, beta chain [Enterobacteria
           phage WV8]
          Length = 357

 Score = 49.6 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 9/121 (7%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQ---KSRTMLHEATLLEIAYAHETM--PKGF 57
           DE LH    I+V+ +   +    W K FQQ   + + +L E    E  +++      +  
Sbjct: 222 DEILHTKIDIEVLKETLRD--DEWQKAFQQILPEIKVILDEVVESEEKWSYYIFSEGRAV 279

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-PFPWMSEVIDLKKEKNF-FETRVTE 115
           VGLN     +++ + A       G+   F   +  P  +M + +++ KE+N   E +   
Sbjct: 280 VGLNTKLLHEWVYYNAAPLYDMFGIPRDFVAPKEPPLKYMIKKMEIDKEQNANQEQQNGA 339

Query: 116 Y 116
           Y
Sbjct: 340 Y 340


>gi|325694009|gb|EGD35927.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK150]
          Length = 319

 Score = 49.6 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y         VG 
Sbjct: 188 IRDESVHGTYIGYKFQLAFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLY--DTVGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|327458665|gb|EGF05013.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK1057]
          Length = 319

 Score = 49.6 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y         VG 
Sbjct: 188 IRDESVHGTYIGYKFQLAFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLY--DTVGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|260426338|ref|ZP_05780317.1| ribonucleoside-diphosphate reductase, beta subunit [Citreicella sp.
           SE45]
 gi|260420830|gb|EEX14081.1| ribonucleoside-diphosphate reductase, beta subunit [Citreicella sp.
           SE45]
          Length = 324

 Score = 49.6 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 49/134 (36%), Gaps = 14/134 (10%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E   +E  Y  E      +GL
Sbjct: 195 IRDEAVHGYYIGYKFQRAMERETAERRQELKDYAFGLLFELYEIEGHYTEELYDD--LGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEY 116
                + ++ + AN+    +G E LF       NP   +   +    E  +FF    + Y
Sbjct: 253 T-EEVKSFLHYNANKALQNLGFEALFPPEACEVNPA--ILAALSPDSENHDFFSGSGSSY 309

Query: 117 QQGAEL-----KWD 125
             G  +      WD
Sbjct: 310 VIGRAVATEDDDWD 323


>gi|269975299|gb|ACZ55523.1| ribonucleoside diphosphate reductase beta chain [Staphylococcus
           phage SA1]
          Length = 357

 Score = 49.6 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 9/121 (7%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQ---KSRTMLHEATLLEIAYAHETM--PKGF 57
           DE LH    I+V+ +   +    W K FQQ   + + +L E    E  +++      +  
Sbjct: 222 DEILHTKIDIEVLKETLRD--DEWQKAFQQILPEIKVILDEVVESEEKWSYYIFSEGRAV 279

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-PFPWMSEVIDLKKEKNF-FETRVTE 115
           VGLN     +++ + A       G+   F   +  P  +M + +++ KE+N   E +   
Sbjct: 280 VGLNTKLLHEWVYYNAAPLYDMFGIPRDFVAPKEPPLKYMIKKMEIDKEQNANQEQQNGA 339

Query: 116 Y 116
           Y
Sbjct: 340 Y 340


>gi|94990703|ref|YP_598803.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS10270]
 gi|94544211|gb|ABF34259.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS10270]
          Length = 320

 Score = 49.6 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    + F+     +L++    E  Y   T+  G  G 
Sbjct: 189 IRDESVHGTYIGYKFQLGFNELPEDEQENFRDWMYDLLYQLYENEEKYTK-TLYDGV-GW 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 247 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 296


>gi|19746348|ref|NP_607484.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS8232]
 gi|50914444|ref|YP_060416.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS10394]
 gi|71903783|ref|YP_280586.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS6180]
 gi|94994624|ref|YP_602722.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS10750]
 gi|139473584|ref|YP_001128300.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes str. Manfredo]
 gi|19748543|gb|AAL97983.1| ribonucleotide diphosphate reductase small subunit [Streptococcus
           pyogenes MGAS8232]
 gi|50903518|gb|AAT87233.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS10394]
 gi|71802878|gb|AAX72231.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS6180]
 gi|94548132|gb|ABF38178.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS10750]
 gi|134271831|emb|CAM30066.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus pyogenes str. Manfredo]
          Length = 319

 Score = 49.3 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    + F+     +L++    E  Y   T+  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQENFRDWMYDLLYQLYENEEKYTK-TLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|22536982|ref|NP_687833.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           agalactiae 2603V/R]
 gi|25010891|ref|NP_735286.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           agalactiae NEM316]
 gi|76788606|ref|YP_329564.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           agalactiae A909]
 gi|76799231|ref|ZP_00781405.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae 18RS21]
 gi|77405557|ref|ZP_00782648.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae H36B]
 gi|77408849|ref|ZP_00785576.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae COH1]
 gi|77413113|ref|ZP_00789313.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae 515]
 gi|22533837|gb|AAM99705.1|AE014229_6 ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           agalactiae 2603V/R]
 gi|23095270|emb|CAD46480.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76563663|gb|ABA46247.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           agalactiae A909]
 gi|76585414|gb|EAO61998.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae 18RS21]
 gi|77160814|gb|EAO71925.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae 515]
 gi|77172535|gb|EAO75677.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae COH1]
 gi|77175864|gb|EAO78642.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae H36B]
 gi|319744839|gb|EFV97177.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           agalactiae ATCC 13813]
          Length = 319

 Score = 49.3 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    + F+     +L++    E  Y   T+  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQENFRDWMYDLLYQLYENEEKYTK-TLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|310641424|ref|YP_003946182.1| ribonucleoside-diphosphate reductase beta chain [Paenibacillus
           polymyxa SC2]
 gi|309246374|gb|ADO55941.1| Ribonucleoside-diphosphate reductase beta chain [Paenibacillus
           polymyxa SC2]
          Length = 321

 Score = 49.3 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 52/120 (43%), Gaps = 5/120 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +   +  +I  E      ++  Q    +L      E  Y  +      +GL
Sbjct: 191 LRDESIHGVYVGVLAQEIYAELDEEEQRDLYQTLVGLLRYLHNNEEQYTEQIY--APIGL 248

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                + ++++ AN+    +G +PLF+  E NP  + + +    K+ +FF  +   Y + 
Sbjct: 249 -VDDVKVFLRYNANKAMMNLGFDPLFEEEEVNPIVF-NGISTHTKQHDFFSKKGNGYVRA 306


>gi|15675308|ref|NP_269482.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes M1 GAS]
 gi|21910586|ref|NP_664854.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS315]
 gi|28895723|ref|NP_802073.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes SSI-1]
 gi|71910937|ref|YP_282487.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS5005]
 gi|94988801|ref|YP_596902.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS9429]
 gi|94992686|ref|YP_600785.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS2096]
 gi|306826388|ref|ZP_07459706.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes ATCC 10782]
 gi|13622486|gb|AAK34203.1| ribonucleotide diphosphate reductase small subunit [Streptococcus
           pyogenes M1 GAS]
 gi|21904787|gb|AAM79657.1| putative ribonucleoside-diphosphate reductase 2 beta subunit
           [Streptococcus pyogenes MGAS315]
 gi|28810972|dbj|BAC63906.1| putative ribonucleotide diphosphate reductase, small subunit
           [Streptococcus pyogenes SSI-1]
 gi|71853719|gb|AAZ51742.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS5005]
 gi|94542309|gb|ABF32358.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS9429]
 gi|94546194|gb|ABF36241.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS2096]
 gi|304431419|gb|EFM34410.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes ATCC 10782]
          Length = 319

 Score = 49.3 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    + F+     +L++    E  Y   T+  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQENFRDWMYDLLYQLYENEEKYTK-TLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|77410697|ref|ZP_00787056.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae CJB111]
 gi|77163233|gb|EAO74185.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae CJB111]
          Length = 319

 Score = 49.3 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    + F+     +L++    E  Y   T+  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQENFRDWMYDLLYQLYENEEKYTK-TLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|56808544|ref|ZP_00366279.1| COG0208: Ribonucleotide reductase, beta subunit [Streptococcus
           pyogenes M49 591]
 gi|209559615|ref|YP_002286087.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes NZ131]
 gi|209540816|gb|ACI61392.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
           [Streptococcus pyogenes NZ131]
          Length = 319

 Score = 49.3 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    + F+     +L++    E  Y   T+  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQENFRDWMYDLLYQLYENEEKYTK-TLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|157149762|ref|YP_001450838.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           gordonii str. Challis substr. CH1]
 gi|157074556|gb|ABV09239.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           gordonii str. Challis substr. CH1]
          Length = 319

 Score = 49.3 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y  ET+  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TETLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDTADDVNPIV-MNGISTGTSNHDFF 295


>gi|332362636|gb|EGJ40434.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK49]
          Length = 332

 Score = 49.3 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y         VG 
Sbjct: 201 IRDESVHGTYIGYKFQLGFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLY--DTVGW 258

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 259 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 308


>gi|319938784|ref|ZP_08013148.1| ribonucleoside-diphosphate reductase [Streptococcus anginosus
           1_2_62CV]
 gi|319811834|gb|EFW08100.1| ribonucleoside-diphosphate reductase [Streptococcus anginosus
           1_2_62CV]
          Length = 319

 Score = 49.3 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    + F++    +L+     E  Y  ET+  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQETFREWMYDLLYTLYENEEGY-TETLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDTADDVNPIV-MNGISTGTSNHDFF 295


>gi|158079504|ref|YP_001504317.1| putative ribonucleotide reductase [Enterococcus phage phiEF24C]
 gi|157890348|dbj|BAF81476.1| putative ribonucleotide reductase [Enterococcus phage phiEF24C]
          Length = 327

 Score = 49.3 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          + P    KE +Q    +  +    E  Y  E   +  +G 
Sbjct: 190 IRDESVHGTYIGYKYQLGFNQLPETEQKEMEQWVIDLAFKLWENETQYTAELYSE--IGW 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++  N+    +G+ PLF  T    NP   M+ +       +FF
Sbjct: 248 T-KDVNTFLEYNLNKALANLGMNPLFPTTSADVNPIV-MNGISTTTSNHDFF 297


>gi|218663032|ref|ZP_03518962.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium etli
           IE4771]
          Length = 324

 Score = 49.3 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 50/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E  Y  E +  G  GL
Sbjct: 194 IRDEAVHGYYIGYKFQRGLERLSEERRQEIKDFAFDLLLELYDNEARY-TEALYDGV-GL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 308

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 309 YVIGKAVATEDEDWD 323


>gi|240849861|ref|YP_002971249.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
           grahamii as4aup]
 gi|240266984|gb|ACS50572.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
           grahamii as4aup]
          Length = 324

 Score = 49.3 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 47/132 (35%), Gaps = 12/132 (9%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          +      KE +  +  +L +   +E  Y  +      +GL
Sbjct: 194 IRDEAVHGYYIGYKFQLGFAKLDEAKKKEIKDFAFNLLFDLYNIECKYTEDLY--DALGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115
                + ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKIFLHYNANKALMNLGFEALFPPEVCRVNPAILAALSPNSDENH--DFFSGAGSS 308

Query: 116 YQ--QGAELKWD 125
           Y   +      D
Sbjct: 309 YVIGKAVATTDD 320


>gi|184201049|ref|YP_001855256.1| ribonucleoside-diphosphate reductase beta subunit [Kocuria
           rhizophila DC2201]
 gi|183581279|dbj|BAG29750.1| ribonucleoside-diphosphate reductase beta subunit [Kocuria
           rhizophila DC2201]
          Length = 326

 Score = 49.3 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 55/139 (39%), Gaps = 23/139 (16%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +  ++      +E +  +  +L E    E+AYA E +     G 
Sbjct: 196 IRDEAVHGYYIGYKYQKGLLQESPQRQQELKDYTYDLLDELYENEVAYA-EALYDSV-GW 253

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI---------DLKKEKNFFET 111
                ++++ + AN+  + +G E LF         M++V          +  +  +FF  
Sbjct: 254 T-EDVKKFLHYNANKALNNLGYEALFPRE------MTDVSPAILSSLSPNADENHDFFSG 306

Query: 112 RVTEYQQGAEL-----KWD 125
             + Y  G  +      WD
Sbjct: 307 SGSSYVIGKAVNTEDEDWD 325


>gi|49475007|ref|YP_033048.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
           henselae str. Houston-1]
 gi|49237812|emb|CAF27007.1| Ribonucleotide reductase beta-chain [Bartonella henselae str.
           Houston-1]
          Length = 324

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 47/132 (35%), Gaps = 12/132 (9%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          +      KE +  +  +L +   +E  Y  +      +GL
Sbjct: 194 IRDEAVHGYYIGYKFQLGFAKLDETKKKEVKDFAFNLLFDLYNIECKYTEDLY--DALGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115
                + ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKIFLHYNANKALMNLGFEALFPSEVCRVNPAILAALSPNSDENH--DFFSGAGSS 308

Query: 116 YQ--QGAELKWD 125
           Y   +      D
Sbjct: 309 YVIGKAVATTDD 320


>gi|311992719|ref|YP_004009587.1| NrdB ribonucleotide reductase beta subunit [Acinetobacter phage
           Ac42]
 gi|298684502|gb|ADI96463.1| NrdB ribonucleotide reductase beta subunit [Acinetobacter phage
           Ac42]
          Length = 372

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 11/125 (8%)

Query: 3   DE-SLHLNFGIDVINQIKI-ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG--FV 58
           DE  +H  + ++V+ ++   E+      + + K   +L E    EI +A      G   V
Sbjct: 232 DEFEIHCEYRLEVLKELLASEHGQAAFAKLRPKMIKILKEVIESEITWAKFLFEDGQAIV 291

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEP-----LFKYTENPFPWMSEVIDLKKEKNF-FETR 112
           G+NA    Q+  F A       G        +F   ENP P +   I++ K +N   ET 
Sbjct: 292 GMNADVLIQWALFNAKAVAQNFGFTEEELGFVFP-EENPMPHLESWININKTQNANQETV 350

Query: 113 VTEYQ 117
              Y+
Sbjct: 351 NGAYK 355


>gi|323127635|gb|ADX24932.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 319

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    + F++    +L++    E  Y   ++  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEAEQETFREWMYDLLYQLYENEEDYTK-SLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|73663294|ref|YP_302075.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
 gi|72495809|dbj|BAE19130.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
          Length = 322

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 7/109 (6%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DES+H  F       ++ E       +  Q+   +L +    E+AY H       +GL A
Sbjct: 194 DESIHGVFTGMDAQSLRNELSESEKLQADQEMYKLLDDLYKNEVAYTHSLYDD--IGL-A 250

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109
                Y+++  N+    +G +P F+  E NP   +   +D   +  +FF
Sbjct: 251 EDVLNYVRYNGNKALSNLGFDPYFEEREFNPI--IENALDTTTKNHDFF 297


>gi|92112513|ref|YP_572441.1| ribonucleotide-diphosphate reductase subunit beta [Chromohalobacter
           salexigens DSM 3043]
 gi|91795603|gb|ABE57742.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Chromohalobacter salexigens DSM 3043]
          Length = 326

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 47/124 (37%), Gaps = 10/124 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      Q          +E +  +  +L E    E+ Y         VGL
Sbjct: 196 IRDEAVHGYYIGYKFQQALARESAERQQEIKDATFDLLLELYDNEVHYTESLYDD--VGL 253

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN--FFETRVTE 115
                + ++ + AN+    +G EPLF       NP   +   +    E+N  FF    + 
Sbjct: 254 T-EEVKAFLHYNANKALMNLGYEPLFPGATEAVNPA--ILAALSPGAEENHDFFSGSGSS 310

Query: 116 YQQG 119
           Y  G
Sbjct: 311 YVIG 314


>gi|327189837|gb|EGE56975.1| ribonucleoside-diphosphate reductase protein, beta subunit
           [Rhizobium etli CNPAF512]
          Length = 324

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 50/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E  Y  E +  G  GL
Sbjct: 194 IRDEAVHGYYIGYKFQRGLERLSEERRQEIKDFAFDLLLELYDNEARY-TEALYDGV-GL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 308

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 309 YVIGKAVATEDEDWD 323


>gi|312862767|ref|ZP_07723007.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           vestibularis F0396]
 gi|322516573|ref|ZP_08069487.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           vestibularis ATCC 49124]
 gi|311101627|gb|EFQ59830.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           vestibularis F0396]
 gi|322124843|gb|EFX96267.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           vestibularis ATCC 49124]
          Length = 320

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    + F++    +L++    E  Y   ++  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQESFREWMYDLLYQLYENEELYTK-SLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDSANDVNPIV-MNGISTGTSNHDFF 295


>gi|228475302|ref|ZP_04060026.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           hominis SK119]
 gi|228270678|gb|EEK12092.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           hominis SK119]
          Length = 322

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 7/109 (6%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DES+H  F       ++ E      ++  ++   +L E    E++Y H       +GL  
Sbjct: 194 DESIHGVFTGLDAQSLRNELSENEKQKADKEMYKLLEELYKNEVSYTHMLYDD--IGLT- 250

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109
                Y+Q+  N+    +G EP F+  E NP   +   +D   +  +FF
Sbjct: 251 EDVLNYVQYNGNKALSNLGFEPYFEEKEFNPI--IENALDTSTKNHDFF 297


>gi|218709884|ref|YP_002417505.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio
           splendidus LGP32]
 gi|218322903|emb|CAV19080.1| Ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           splendidus LGP32]
          Length = 323

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 10/131 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +                    + ++ +++     +E  Y         VGL
Sbjct: 193 IRDEAIHGYYIGYKFQLAYQSLSEEEQARVKDEAYSLMFSLYEIETQYTESLY--DPVGL 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVI-DLKKEKNFFETRVTEY 116
                + ++ + AN+    +G E LF       NP   M+ +  +  +  +FF    + Y
Sbjct: 251 T-EDVKHFLHYNANKALMNLGFEALFPDELCQVNPAI-MAALSPNADENHDFFSGSGSSY 308

Query: 117 Q--QGAELKWD 125
              +    + D
Sbjct: 309 VIGKAVATEDD 319


>gi|114766102|ref|ZP_01445111.1| ribonucleoside-diphosphate reductase, beta subunit protein
           [Pelagibaca bermudensis HTCC2601]
 gi|114541657|gb|EAU44698.1| ribonucleoside-diphosphate reductase, beta subunit protein
           [Roseovarius sp. HTCC2601]
          Length = 326

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 54/135 (40%), Gaps = 16/135 (11%)

Query: 1   MRDESLHLNFGIDVI-NQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
           +RDE++H  +        +++E+P    +E +  +  +L E   +E  Y  E      +G
Sbjct: 197 IRDEAVHGYYIGYKFQRGLELESPERR-QELKDYAFGLLFELYDIEARYTEELY--DGIG 253

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTE 115
           L     + ++ + AN+    +G E LF       NP   +   +    E  +FF    + 
Sbjct: 254 LT-EEVKAFLHYNANKALQNLGFEALFPPEAAEVNPA--ILAALSPDSENHDFFSGSGSS 310

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 311 YVIGRAVATEDDDWD 325


>gi|220912864|ref|YP_002488173.1| ribonucleotide-diphosphate reductase subunit beta [Arthrobacter
           chlorophenolicus A6]
 gi|219859742|gb|ACL40084.1| Ribonucleoside-diphosphate reductase [Arthrobacter chlorophenolicus
           A6]
          Length = 324

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E+ Y H+      VGL
Sbjct: 194 IRDEAVHGYYIGYKFQRALETVSEERRQEIKDYTFELLFELYENEVQYTHDLY--DGVGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   ++++ + AN+    +G E +F  +    NP     +S   D     +FF    + 
Sbjct: 252 -AEDVKKFLHYNANKALMNLGYEAMFPASVTDVNPAILSALSPNADENH--DFFSGSGSS 308

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 309 YVIGKAVNTEDEDWD 323


>gi|55821276|ref|YP_139718.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           thermophilus LMG 18311]
 gi|55823189|ref|YP_141630.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           thermophilus CNRZ1066]
 gi|116628014|ref|YP_820633.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           thermophilus LMD-9]
 gi|55737261|gb|AAV60903.1| ribonucleotide diphosphate reductase beta subunit [Streptococcus
           thermophilus LMG 18311]
 gi|55739174|gb|AAV62815.1| ribonucleotide diphosphate reductase beta subunit [Streptococcus
           thermophilus CNRZ1066]
 gi|116101291|gb|ABJ66437.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Streptococcus thermophilus LMD-9]
 gi|312278606|gb|ADQ63263.1| Ribonucleoside-diphosphate reductase class Ib beta subunit
           [Streptococcus thermophilus ND03]
          Length = 320

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    + F++    +L++    E  Y   ++  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEKEQESFREWMYDLLYQLYENEELYTK-SLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDSANDVNPIV-MNGISTGTSNHDFF 295


>gi|324990559|gb|EGC22495.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK353]
          Length = 319

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y         VG 
Sbjct: 188 IRDESVHGTYIGYKFQLSFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLY--DTVGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|251782830|ref|YP_002997133.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|242391460|dbj|BAH81919.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
          Length = 319

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    + F++    +L++    E  Y   ++  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEAEQETFREWMYDLLYQLYENEENYTK-SLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|324993305|gb|EGC25225.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK405]
 gi|324995391|gb|EGC27303.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK678]
 gi|325697177|gb|EGD39064.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK160]
 gi|327461576|gb|EGF07907.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK1]
 gi|327473300|gb|EGF18720.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK408]
          Length = 319

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y         VG 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLY--DTVGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|328543067|ref|YP_004303176.1| ribonucleoside-diphosphate reductase, beta subunit [polymorphum
           gilvum SL003B-26A1]
 gi|326412813|gb|ADZ69876.1| Ribonucleoside-diphosphate reductase, beta subunit [Polymorphum
           gilvum SL003B-26A1]
          Length = 325

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 51/134 (38%), Gaps = 13/134 (9%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  + +++ +   +E  Y         VGL
Sbjct: 195 IRDEAVHGYYIGYKFQRGLETVSEAERQEIKDFAFSLMFDLYAIEAKYTESL--CDGVGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVI-DLKKEKNFFETRVTEY 116
                + ++ + AN+    +G E LF       NP   M+ +  +  +  +FF    + Y
Sbjct: 253 T-EDVKHFLHYNANKALMNLGYEALFPDAVCAVNPAI-MAALSPNADENHDFFSGSGSSY 310

Query: 117 QQGAEL-----KWD 125
             G  +      WD
Sbjct: 311 VIGKAVATEDEDWD 324


>gi|259417680|ref|ZP_05741599.1| ribonucleoside-diphosphate reductase, beta subunit [Silicibacter
           sp. TrichCH4B]
 gi|259346586|gb|EEW58400.1| ribonucleoside-diphosphate reductase, beta subunit [Silicibacter
           sp. TrichCH4B]
          Length = 325

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 49/134 (36%), Gaps = 13/134 (9%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          KE +  +  +L +   +E  Y  +      +GL
Sbjct: 195 IRDEAIHGYYIGYKFQRGMERLSEAERKELKDFAFGLLFDLYDIEARYTEQLY--DGLGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEY 116
                + ++ + AN+    +G E LF       NP   M+ +     E  +FF    + Y
Sbjct: 253 T-EDVKNFLHYNANKALQNLGFEALFPEETCRVNPAI-MAALSPGSDENHDFFSGSGSSY 310

Query: 117 QQGAE-----LKWD 125
             G         WD
Sbjct: 311 VIGKAEATEDEDWD 324


>gi|256015100|ref|YP_003105109.1| ribonucleotide-diphosphate reductase beta subunit [Brucella microti
           CCM 4915]
 gi|255997760|gb|ACU49447.1| ribonucleotide-diphosphate reductase beta subunit [Brucella microti
           CCM 4915]
          Length = 329

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 10/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E+ Y  E +  G  GL
Sbjct: 199 IRDEAVHGYYIGHKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEALYDGV-GL 256

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 257 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 313

Query: 116 YQQGAEL 122
           Y  G  +
Sbjct: 314 YVIGKAV 320


>gi|227876446|ref|ZP_03994558.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           mulieris ATCC 35243]
 gi|269976014|ref|ZP_06183018.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
           mulieris 28-1]
 gi|306817405|ref|ZP_07451150.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           mulieris ATCC 35239]
 gi|307700420|ref|ZP_07637459.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
           mulieris FB024-16]
 gi|227842987|gb|EEJ53184.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           mulieris ATCC 35243]
 gi|269935842|gb|EEZ92372.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
           mulieris 28-1]
 gi|304649846|gb|EFM47126.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           mulieris ATCC 35239]
 gi|307614405|gb|EFN93635.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
           mulieris FB024-16]
          Length = 322

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 50/126 (39%), Gaps = 10/126 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          E+     +E +  + ++L +    E+ Y         +GL
Sbjct: 192 IRDEAVHGYYIGYKFQVAMRESSSSRQEELRDYTYSLLTDLYDNEVLYTETLY--DTLGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN--FFETRVTE 115
                ++++ + AN+    +G E LF   E   NP   +   +    E+N  FF    + 
Sbjct: 250 T-EDVKKFLHYNANKALMNLGYEALFPPEEIDVNPA--ILAALSPAAEENHDFFSGSGSS 306

Query: 116 YQQGAE 121
           Y  G  
Sbjct: 307 YTIGTA 312


>gi|269794349|ref|YP_003313804.1| ribonucleoside-diphosphate reductase class Ib subunit beta
           [Sanguibacter keddieii DSM 10542]
 gi|269096534|gb|ACZ20970.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Sanguibacter keddieii DSM 10542]
          Length = 325

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +       E +  +  +L E    E+ Y  +      VGL
Sbjct: 195 IRDEAVHGYYIGYKYQKGLEKLSPAERDEMKAYTFELLFELYENEVQYTADLY--DGVGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 253 T-EDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENH--DFFSGSGSS 309

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 310 YVIGKAVNTEDEDWD 324


>gi|328945482|gb|EGG39633.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK1087]
          Length = 319

 Score = 48.9 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y         VG 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLY--DTVGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|289167885|ref|YP_003446154.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           mitis B6]
 gi|288907452|emb|CBJ22289.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           mitis B6]
          Length = 321

 Score = 48.9 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y  E++  G  G 
Sbjct: 189 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 247 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 296


>gi|314936969|ref|ZP_07844316.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           hominis subsp. hominis C80]
 gi|313655588|gb|EFS19333.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           hominis subsp. hominis C80]
          Length = 322

 Score = 48.9 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 7/109 (6%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DES+H  F       ++ E      ++  ++   +L E    E++Y H       +GL  
Sbjct: 194 DESIHGVFTGLDAQSLRNELSENEKQKADKEMYKLLEELYKNEVSYTHMLYDD--IGLT- 250

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109
                Y+Q+  N+    +G EP F+  E NP   +   +D   +  +FF
Sbjct: 251 EDVLNYVQYNGNKALSNLGFEPYFEEKEFNPI--IENALDTSTKNHDFF 297


>gi|260583950|ref|ZP_05851698.1| ribonucleoside-diphosphate reductase, beta subunit [Granulicatella
           elegans ATCC 700633]
 gi|260158576|gb|EEW93644.1| ribonucleoside-diphosphate reductase, beta subunit [Granulicatella
           elegans ATCC 700633]
          Length = 336

 Score = 48.9 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 5/111 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +      Q   E P    +  +     +  E    E+ Y         VG 
Sbjct: 205 IRDESVHGTYTGYKFQQGYNELPLEEQETLKMWVYQLCLELYQNEVKYTQSIY--DQVGW 262

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  T        M+ +       +FF
Sbjct: 263 T-EKVKVFIRYNANKALQNLGFDPLFPDTAEDVDPIVMNGISTGTSNHDFF 312


>gi|116253995|ref|YP_769833.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115258643|emb|CAK09747.1| putative ribonucleoside-diphosphate reductase beta subunit
           [Rhizobium leguminosarum bv. viciae 3841]
          Length = 324

 Score = 48.9 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 50/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E  Y  E +  G  GL
Sbjct: 194 IRDEAVHGYYIGYKFQRGLERLGDERKQEIKDFAFELLLELYDNEAKY-TEALYDGV-GL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 308

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 309 YVIGKAVATEDEDWD 323


>gi|119961248|ref|YP_948075.1| ribonucleotide-diphosphate reductase subunit beta [Arthrobacter
           aurescens TC1]
 gi|119948107|gb|ABM07018.1| ribonucleoside-diphosphate reductase beta chain [Arthrobacter
           aurescens TC1]
          Length = 324

 Score = 48.9 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y H+      VGL
Sbjct: 194 IRDEAVHGYYIGYKFQKGLEKVSEARKQEIKDYTFELLFELYENEVQYTHDLY--DGVGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   ++++ + AN+    +G E +F  +    NP     +S   D     +FF    + 
Sbjct: 252 -AEDVKKFLHYNANKALMNLGYEAMFPASVTDVNPAILSALSPNADENH--DFFSGSGSS 308

Query: 116 YQQGAELK 123
           Y  G  + 
Sbjct: 309 YVIGKAVN 316


>gi|241206478|ref|YP_002977574.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240860368|gb|ACS58035.1| Ribonucleoside-diphosphate reductase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 324

 Score = 48.9 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 50/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E  Y  E +  G  GL
Sbjct: 194 IRDEAVHGYYIGYKFQRGLERLGDERKQEIKDFAFELLLELYDNEAKY-TEALYDGV-GL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 308

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 309 YVIGKAVATEDEDWD 323


>gi|194015457|ref|ZP_03054073.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           pumilus ATCC 7061]
 gi|194012861|gb|EDW22427.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           pumilus ATCC 7061]
          Length = 329

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 52/123 (42%), Gaps = 7/123 (5%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +   +  +I          +  + S  +L E    E+AY  +    G VGL
Sbjct: 200 IRDEAIHGVYVGLLAQEIYNRQTDDVRADLHEWSLGLLTELYENEVAYTDDVY--GAVGL 257

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
            A   + ++++ AN+    +G +  F     NP   +   +  K +  +FF  +   Y++
Sbjct: 258 -AHDVKAFVRYNANKALMNLGFDAHFPDELVNPI--VINGLSTKTKAHDFFSMQGNGYKK 314

Query: 119 GAE 121
              
Sbjct: 315 ATV 317


>gi|86148040|ref|ZP_01066342.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp.
           MED222]
 gi|85834173|gb|EAQ52329.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp.
           MED222]
          Length = 320

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 10/131 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +                    + ++ +++     +E  Y         VGL
Sbjct: 190 IRDEAIHGYYIGYKFQLAYQSLSEEEQARVKDEAYSLMFSLYEIETQYTESLY--DPVGL 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVI-DLKKEKNFFETRVTEY 116
                + ++ + AN+    +G E LF       NP   M+ +  +  +  +FF    + Y
Sbjct: 248 T-EDVKHFLHYNANKALMNLGFEALFPDELCQVNPAI-MAALSPNADENHDFFSGSGSSY 305

Query: 117 Q--QGAELKWD 125
              +    + D
Sbjct: 306 VIGKAVATEDD 316


>gi|332686050|ref|YP_004455824.1| ribonucleotide reductase of class Ib (aerobic), subunit beta
           [Melissococcus plutonius ATCC 35311]
 gi|332370059|dbj|BAK21015.1| ribonucleotide reductase of class Ib (aerobic), beta subunit
           [Melissococcus plutonius ATCC 35311]
          Length = 323

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +      +           E +     +L+E    E  Y  E      +G 
Sbjct: 188 IRDESVHGTYIGYKFQRGFNGLEEQEQDELKNWMYDLLYELYENEEKYTEELY--DPLGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G+ PLF  T    NP   M+ +       +FF
Sbjct: 246 T-EDVKIFLRYNANKALMNLGMNPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|291092706|gb|ADD74390.1| ribonucleotide reductase small subunit [uncultured virus]
          Length = 181

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 6/47 (12%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY 48
           RDE LH +F   +  +      H+  K        ++ EA   E  +
Sbjct: 140 RDEGLHCDFACLLYTK------HIVHKLPNNVIYNIVREAVHAESIF 180


>gi|308068541|ref|YP_003870146.1| ribonucleoside-diphosphate reductase beta subunit (ribonucleotide
           reductase small subunit) [Paenibacillus polymyxa E681]
 gi|305857820|gb|ADM69608.1| Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide
           reductase small subunit) [Paenibacillus polymyxa E681]
          Length = 321

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 52/125 (41%), Gaps = 15/125 (12%)

Query: 1   MRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET-MPK 55
           +RDES+H         ++  ++  E      ++  Q    +L      E  Y  +   P 
Sbjct: 191 LRDESIHGVYVGVLAQEIYAELAEEE----QRDLYQTLVGLLRYLHNNEEQYTEQIYTPI 246

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVT 114
           G V       + ++++ AN+    +G +PLF+  E NP  + + +    K+ +FF  +  
Sbjct: 247 GLV----DDVKVFLRYNANKAMMNLGFDPLFEEEEVNPIVF-NGISTHTKQHDFFSKKGN 301

Query: 115 EYQQG 119
            Y + 
Sbjct: 302 GYVRA 306


>gi|228476905|ref|ZP_04061550.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           salivarius SK126]
 gi|228251479|gb|EEK10624.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           salivarius SK126]
          Length = 319

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    + F++    +L++    E  Y   ++  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQESFREWMYDLLYQLYENEELYTK-SLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDSANDVNPIV-MNGISTGTSNHDFF 295


>gi|222153355|ref|YP_002562532.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           uberis 0140J]
 gi|222114168|emb|CAR42683.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus uberis 0140J]
          Length = 319

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E      + F++    +L++    E  Y         VG 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELSEDKQESFREWMYDLLYQLYENEEEYTKTLY--DPVGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|322831489|ref|YP_004211516.1| Ribonucleoside-diphosphate reductase [Rahnella sp. Y9602]
 gi|321166690|gb|ADW72389.1| Ribonucleoside-diphosphate reductase [Rahnella sp. Y9602]
          Length = 327

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 53/135 (39%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          ++ ++++  ++ +    EI Y  E      VG 
Sbjct: 197 IRDEAVHGYYIGYKFQKALALESEERQRQIKEQAFDLIQDLYDNEIRYTEELY--DGVGW 254

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115
           +    ++++ + AN+    +G E LF  +    NP     +S   D     +FF    + 
Sbjct: 255 S-EDVKKFLHYNANKALMNLGYEALFPASMADVNPAILSALSPNADENH--DFFSGSGSS 311

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 312 YVIGKAVNTEDEDWD 326


>gi|322389171|ref|ZP_08062732.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           parasanguinis ATCC 903]
 gi|321144076|gb|EFX39493.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           parasanguinis ATCC 903]
          Length = 321

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y  E++  G  G 
Sbjct: 190 IRDESVHGTYIGYKFQLGFNELPEDEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 248 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 297


>gi|256832970|ref|YP_003161697.1| Ribonucleoside-diphosphate reductase [Jonesia denitrificans DSM
           20603]
 gi|256686501|gb|ACV09394.1| Ribonucleoside-diphosphate reductase [Jonesia denitrificans DSM
           20603]
          Length = 325

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L+E    E+AY  E++  G  GL
Sbjct: 195 IRDEAVHGYYIGYKYQKGLEAVTPERREELKAYTFDLLYELYDNEVAY-TESLYDGV-GL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 253 T-EDVKKFLRYNANKALLNLGYEALFPKDETDVNPAILSALSPNADENH--DFFSGSGSS 309

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 310 YVIGKAVNTEDEDWD 324


>gi|319947340|ref|ZP_08021573.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           australis ATCC 700641]
 gi|319746582|gb|EFV98842.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           australis ATCC 700641]
          Length = 319

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y  E++  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|307704819|ref|ZP_07641714.1| ribonucleoside-diphosphate reductase 2 subunit beta [Streptococcus
           mitis SK597]
 gi|307708708|ref|ZP_07645171.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           mitis NCTC 12261]
 gi|307709353|ref|ZP_07645811.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           mitis SK564]
 gi|307615282|gb|EFN94492.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           mitis NCTC 12261]
 gi|307619936|gb|EFN99054.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           mitis SK564]
 gi|307621648|gb|EFO00690.1| ribonucleoside-diphosphate reductase 2 subunit beta [Streptococcus
           mitis SK597]
          Length = 320

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y  E++  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|51247866|pdb|1UZR|A Chain A, Crystal Structure Of The Class Ib Ribonucleotide Reductase
           R2f-2 Subunit From Mycobacterium Tuberculosis
 gi|51247867|pdb|1UZR|B Chain B, Crystal Structure Of The Class Ib Ribonucleotide Reductase
           R2f-2 Subunit From Mycobacterium Tuberculosis
 gi|51247868|pdb|1UZR|C Chain C, Crystal Structure Of The Class Ib Ribonucleotide Reductase
           R2f-2 Subunit From Mycobacterium Tuberculosis
          Length = 296

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 6/95 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +       +   E +  +  +L E    E+ Y  +      VGL
Sbjct: 194 IRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDLY--DEVGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP 92
                ++++++ AN+    +G E LF   E   NP
Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNP 285


>gi|322376536|ref|ZP_08051029.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           sp. M334]
 gi|321282343|gb|EFX59350.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           sp. M334]
          Length = 320

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y  E++  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|307706628|ref|ZP_07643435.1| ribonucleoside-diphosphate reductase 2, subunit beta [Streptococcus
           mitis SK321]
 gi|307618083|gb|EFN97243.1| ribonucleoside-diphosphate reductase 2, subunit beta [Streptococcus
           mitis SK321]
          Length = 320

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y  E++  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|322385107|ref|ZP_08058754.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           cristatus ATCC 51100]
 gi|321270731|gb|EFX53644.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           cristatus ATCC 51100]
          Length = 321

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y  E++  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|296393703|ref|YP_003658587.1| ribonucleoside-diphosphate reductase [Segniliparus rotundus DSM
           44985]
 gi|296180850|gb|ADG97756.1| Ribonucleoside-diphosphate reductase [Segniliparus rotundus DSM
           44985]
          Length = 334

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +    +     +E +  + ++L +    E+ Y  +      VGL
Sbjct: 204 IRDEAVHGYYIGYKYQRGLQMSTPERREELKDFTFSLLFDLYENEVEYTQDLY--DPVGL 261

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 262 T-EDVKKFLRYNANKALMNLGYEGLFPKDETAVNPAILSALSPNADENH--DFFSGSGSS 318

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 319 YVIGKAVATEDEDWD 333


>gi|311741200|ref|ZP_07715024.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           pseudogenitalium ATCC 33035]
 gi|311303370|gb|EFQ79449.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           pseudogenitalium ATCC 33035]
          Length = 329

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      Q   +       E ++ +  ++++    EI Y  +      +G 
Sbjct: 199 IRDEAVHGYYIGYKFQQAYKQLDEEHQAELKEYTFDLVYDLYDNEIDYTEDLYDD--LGW 256

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+  + +G E LF   E   +P     +S   D     +FF    + 
Sbjct: 257 T-EDVKRFLRYNANKALNNLGFEGLFPADETRVSPAILSSLSPNADENH--DFFSGSGSS 313

Query: 116 YQQG-----AELKWD 125
           Y  G      +  WD
Sbjct: 314 YVIGKAEDTTDDDWD 328


>gi|327468920|gb|EGF14392.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK330]
          Length = 319

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P     + ++    +L+     E  Y         VG 
Sbjct: 188 IRDESVHGTYIGYKFQLAFNELPEDEQNKLKEWMYDLLYTLYENEEGYTESLY--DTVGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|309800432|ref|ZP_07694593.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           infantis SK1302]
 gi|308115948|gb|EFO53463.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           infantis SK1302]
          Length = 319

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ +     +L+     E  Y  E++  G  G 
Sbjct: 187 IRDESVHGTYIGYKFQLGFNELPEDEQEKLKDWMYDLLYTLYENEEGY-TESLYDGV-GW 244

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 245 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 294


>gi|183598095|ref|ZP_02959588.1| hypothetical protein PROSTU_01459 [Providencia stuartii ATCC 25827]
 gi|188020253|gb|EDU58293.1| hypothetical protein PROSTU_01459 [Providencia stuartii ATCC 25827]
          Length = 323

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 53/139 (38%), Gaps = 23/139 (16%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +  ++      KE +  + ++L +    E+ Y  E      VG 
Sbjct: 193 IRDEAIHGYYIGYKFQKSLLKYDEKTQKEIKDFTFSLLFDLYENEVNYTQELY--DTVGW 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI---------DLKKEKNFFET 111
                ++++ + AN+    +G E LF         +++V          D  +  +FF  
Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPDV------VTDVSPAILSALSPDANENHDFFSG 303

Query: 112 RVTEYQQGAELK-----WD 125
             + Y  G  +      WD
Sbjct: 304 SGSSYVIGKAVSTEDDDWD 322


>gi|331266449|ref|YP_004326079.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           oralis Uo5]
 gi|326683121|emb|CBZ00739.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           oralis Uo5]
          Length = 320

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y  E++  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|293365329|ref|ZP_06612046.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           oralis ATCC 35037]
 gi|306825287|ref|ZP_07458629.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sp. oral taxon 071 str. 73H25AP]
 gi|307703869|ref|ZP_07640810.1| ribonucleoside-diphosphate reductase 2, subunit beta [Streptococcus
           oralis ATCC 35037]
 gi|315613100|ref|ZP_07888010.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis ATCC 49296]
 gi|291316779|gb|EFE57215.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           oralis ATCC 35037]
 gi|304432723|gb|EFM35697.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sp. oral taxon 071 str. 73H25AP]
 gi|307622704|gb|EFO01700.1| ribonucleoside-diphosphate reductase 2, subunit beta [Streptococcus
           oralis ATCC 35037]
 gi|315314662|gb|EFU62704.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis ATCC 49296]
          Length = 320

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y  E++  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|555172|gb|AAA46037.1| herpesvirus saimiri gene 60 homologue (aa 177 to 258); putative
          [Bovine herpesvirus 4]
          Length = 82

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 27/76 (35%), Gaps = 9/76 (11%)

Query: 2  RDESLHLNFGIDVINQI--KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
          RDE LH      + N +    + PH+           +  EA  +E  +       G   
Sbjct: 13 RDELLHTRAAALLYNTMVSGADKPHML------WVHNLFKEAVEVEHEFI-LVKSSGVSA 65

Query: 60 LNAPSCEQYMQFIANR 75
          +N      +++  A+R
Sbjct: 66 VNVDDIRSFLEATADR 81


>gi|94985875|ref|YP_605239.1| ribonucleotide-diphosphate reductase subunit beta [Deinococcus
           geothermalis DSM 11300]
 gi|94556156|gb|ABF46070.1| Ribonucleoside-diphosphate reductase [Deinococcus geothermalis DSM
           11300]
          Length = 319

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 46/120 (38%), Gaps = 9/120 (7%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DE+LH ++   +  +     P       + +   +  E    E AY  E      VGL A
Sbjct: 188 DEALHGSYVGLLFQERFAALPQGEQAAVRARFEQLAREFYENECAYTDEVY--AEVGL-A 244

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK--NFFETR-VTEYQQ 118
              + ++++  N  C  +GLE LF   E NP   +   I        +FF  +    Y +
Sbjct: 245 SEVKTFVRYNFNICCDNLGLERLFPEEEVNPL--VLNGIRATGGTTHDFFSIKGAGGYAK 302


>gi|312867164|ref|ZP_07727374.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           parasanguinis F0405]
 gi|311097293|gb|EFQ55527.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           parasanguinis F0405]
          Length = 321

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y  E++  G  G 
Sbjct: 190 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 248 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 297


>gi|306829459|ref|ZP_07462649.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           mitis ATCC 6249]
 gi|304428545|gb|EFM31635.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           mitis ATCC 6249]
          Length = 320

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y  E++  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|270292678|ref|ZP_06198889.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           sp. M143]
 gi|270278657|gb|EFA24503.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           sp. M143]
          Length = 322

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y  E++  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|304398691|ref|ZP_07380563.1| Ribonucleoside-diphosphate reductase [Pantoea sp. aB]
 gi|304353902|gb|EFM18277.1| Ribonucleoside-diphosphate reductase [Pantoea sp. aB]
          Length = 326

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 48/128 (37%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      Q       L  +E QQ +  +L      E+AY         VG 
Sbjct: 196 IRDEAVHGYYIGYKYQQALATADDLRREELQQFAYDLLLALYENEVAYTEALYAD--VGW 253

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115
                + ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 254 -VEEVKTFLHYNANKALMNLGYEALFPAELTAVNPAILSALSPNADENH--DFFSGSGSS 310

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 311 YVMGKAVE 318


>gi|296876816|ref|ZP_06900864.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           parasanguinis ATCC 15912]
 gi|296432318|gb|EFH18117.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           parasanguinis ATCC 15912]
          Length = 321

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y  E++  G  G 
Sbjct: 190 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 248 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 297


>gi|315641368|ref|ZP_07896443.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           italicus DSM 15952]
 gi|315482861|gb|EFU73382.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           italicus DSM 15952]
          Length = 321

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +            P     E +     +L E    E  Y  E   +  +G 
Sbjct: 189 IRDESVHGTYIGYKFQLGFQALPEAEQAELKDWMYGLLFELYENEENYTDELYGE--IGW 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
            A   + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 247 -AEEVKTFLRYNANKALMNMGQDPLFPDSANDVNPIV-MNGISTGTSNHDFF 296


>gi|309786253|ref|ZP_07680881.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
           dysenteriae 1617]
 gi|308925998|gb|EFP71477.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
           dysenteriae 1617]
          Length = 301

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 168 IRDEAVHGYYIGYKYQKSLEKISEAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 225

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP   +   +    ++N  FF    + 
Sbjct: 226 -ADDVKTFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSSSS 282

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 283 YVMGKAVE 290


>gi|82778048|ref|YP_404397.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           dysenteriae Sd197]
 gi|81242196|gb|ABB62906.1| ribonucleoside-diphosphate reductase 2, beta chain [Shigella
           dysenteriae Sd197]
          Length = 322

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKSLEKISEAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP   +   +    ++N  FF    + 
Sbjct: 247 -ADDVKTFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSSSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|121602770|ref|YP_988676.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
           bacilliformis KC583]
 gi|120614947|gb|ABM45548.1| ribonucleoside-diphosphate reductase, beta subunit [Bartonella
           bacilliformis KC583]
          Length = 324

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 10/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          +      +E +  +  ML +   +E  Y  +      +GL
Sbjct: 194 IRDEAIHGYYIGYKFQLGFAKLNEAQKQEMKDFTFNMLFDLYNIECKYTEDLY--DSLGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115
                + ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKVFLHYNANKALMNLGFESLFPSEVCRVNPAILAALSPNSDENH--DFFSGSGSS 308

Query: 116 YQQGAEL 122
           Y  G  +
Sbjct: 309 YVIGKAV 315


>gi|324525159|gb|ADY48515.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum]
          Length = 240

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 7/43 (16%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLL 44
           RDE LH +F   +   IK        K  Q++   ++ EA  L
Sbjct: 205 RDEGLHRDFACLLYKYIKH-------KPSQEQVYEIIKEAVSL 240


>gi|329117318|ref|ZP_08246035.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           parauberis NCFD 2020]
 gi|326907723|gb|EGE54637.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           parauberis NCFD 2020]
          Length = 321

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E      ++F++    +L++    E  Y         VG 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELSEEKQEDFKEWMYDLLYQLYENEENYTKSLY--DQVGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|328958552|ref|YP_004375938.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium
           sp. 17-4]
 gi|328674876|gb|AEB30922.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium
           sp. 17-4]
          Length = 318

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 10/114 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P     +       +L +    E+AY  E      +G+
Sbjct: 188 IRDESVHGTYLGYKFQLTYNELPEEEQNKLLDWMYPLLEDLMENELAYTEEIYSH--IGI 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEK-NFF 109
            A   + ++++ AN+    +G    +   +    NP   +   I ++    +FF
Sbjct: 246 -AEDVKTFVRYNANKSLQNMGFPAYYDNADLADVNPI--VMNGISIETSNHDFF 296


>gi|319406095|emb|CBI79725.1| ribonucleoside-diphosphate reductase beta chain [Bartonella sp. AR
           15-3]
          Length = 324

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 10/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          +      +E +  +  +L +   +E  Y  +      +GL
Sbjct: 194 IRDEAVHGYYIGYKFQLGFAKLHEAKKQEIKDFAFNILFDLYNIECKYTEDLY--DAIGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115
                + ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKVFLHYNANKALMNLGFEALFPPEVCRVNPAILAALSPNSDENH--DFFSGSGSS 308

Query: 116 YQQGAEL 122
           Y  G  +
Sbjct: 309 YVIGKAV 315


>gi|111023403|ref|YP_706375.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus
           jostii RHA1]
 gi|110822933|gb|ABG98217.1| ribonucleotide reductase [Rhodococcus jostii RHA1]
          Length = 321

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +       + +  +  +L E    E+ Y  +      VGL
Sbjct: 191 IRDEAVHGYYIGYKYQKGLEQLTEAERDDLKNYTFELLFELYDNEVDYTQDLY--DEVGL 248

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 249 T-EDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENH--DFFSGSGSS 305

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 306 YVIGKAVNTEDEDWD 320


>gi|67008229|emb|CAH18519.1| ribonucleoside-dihosphate reductase beta chain [Rhodobacteraceae
           bacterium 198]
          Length = 325

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 49/134 (36%), Gaps = 13/134 (9%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          KE +  +  +L +   +E  Y  +      +GL
Sbjct: 195 IRDEAIHGYYIGYKFQRGLERVSEAERKEIKDFAFALLFDLYDIEARYTEQLY--DGLGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEY 116
                + ++ + AN+    +G E LF       NP   M+ +     E  +FF    + Y
Sbjct: 253 T-EDVKNFLHYNANKALQNLGFEALFPDESCRVNPAI-MAALSPGSDENHDFFSGSGSSY 310

Query: 117 QQGAE-----LKWD 125
             G         WD
Sbjct: 311 VIGKAEATEDEDWD 324


>gi|226365904|ref|YP_002783687.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus
           opacus B4]
 gi|226244394|dbj|BAH54742.1| ribonucleoside-diphosphate reductase beta chain [Rhodococcus opacus
           B4]
          Length = 321

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +       + +  +  +L E    E+ Y  +      VGL
Sbjct: 191 IRDEAVHGYYIGYKYQKGLEQLTEAERDDLKNYTFELLFELYDNEVDYTQDLY--DEVGL 248

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   E   NP     +S   D     +FF    + 
Sbjct: 249 T-EDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENH--DFFSGSGSS 305

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 306 YVIGKAVNTEDEDWD 320


>gi|255324325|ref|ZP_05365446.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           tuberculostearicum SK141]
 gi|255298655|gb|EET77951.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           tuberculostearicum SK141]
          Length = 329

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      Q   +       E ++ +  +L++    EI Y  +      +G 
Sbjct: 199 IRDEAVHGYYIGYKFQQAYKQLDEEHQAELKEYTFDLLYDLYDNEIDYTEDLYDD--LGW 256

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+  + +G E LF   E   +P     +S   D     +FF    + 
Sbjct: 257 T-EDVKRFLRYNANKALNNLGFEGLFPADETRVSPAILSSLSPNADENH--DFFSGSGSS 313

Query: 116 YQQG-----AELKWD 125
           Y  G      +  WD
Sbjct: 314 YVIGKAEDTTDDDWD 328


>gi|203454817|ref|YP_002225133.1| gp256 [Mycobacterium phage Myrna]
 gi|197311865|gb|ACH62223.1| gp256 [Mycobacterium phage Myrna]
          Length = 322

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 51/132 (38%), Gaps = 12/132 (9%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E  Y  +       G 
Sbjct: 192 IRDEAVHGYYIGYKFQKGLEKETKARQQELKDYTYELLFELFDNEQEYTQDLY--DATGQ 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN--FFETRVTE 115
                ++++++  N+    +G + LF  ++   NP   +   +    ++N  FF    + 
Sbjct: 250 T-EDVKKFLRYNGNKALQNLGYDALFSRSDCDVNPA--ILSALSPGGDENHDFFSGSGST 306

Query: 116 Y--QQGAELKWD 125
           Y   +G   + D
Sbjct: 307 YVMAKGVVTEDD 318


>gi|212716021|ref|ZP_03324149.1| hypothetical protein BIFCAT_00933 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661388|gb|EEB21963.1| hypothetical protein BIFCAT_00933 [Bifidobacterium catenulatum DSM
           16992]
          Length = 330

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 10/130 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +           E +  +  +L+E    E+ Y         VGL
Sbjct: 200 IRDEAVHGYYIGYKYQKGLERVSEDKRGELRDYTYDLLNELYDNEVEYTRSLY--EPVGL 257

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115
                E+++++  N+    +G   LF       NP     +S   D     +FF    + 
Sbjct: 258 T-QDVEKFLRYNGNKALMNLGYPALFPQEICDVNPSILAALSPNADENH--DFFSGSGSS 314

Query: 116 YQQGAELKWD 125
           Y  G  ++ D
Sbjct: 315 YVMGKSVETD 324


>gi|70727160|ref|YP_254076.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           haemolyticus JCSC1435]
 gi|68447886|dbj|BAE05470.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
           haemolyticus JCSC1435]
          Length = 322

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 7/109 (6%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DES+H  F       ++ E      ++  ++   +L +    E++Y H       +GL+ 
Sbjct: 194 DESIHGVFTGLDAQSLRNELSENEKQKADKEMYKLLEDLYANEVSYTHMLYDD--IGLS- 250

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109
                Y+Q+  N+    +G EP F+  E NP   +   +D   +  +FF
Sbjct: 251 EDVLNYVQYNGNKALSNLGFEPYFEEKEFNPI--IENALDTTTKNHDFF 297


>gi|311064961|ref|YP_003971687.1| ribonucleoside-diphosphate reductase subunit beta NrdF
           [Bifidobacterium bifidum PRL2010]
 gi|310867281|gb|ADP36650.1| NrdF Ribonucleoside-diphosphate reductase beta chain
           [Bifidobacterium bifidum PRL2010]
          Length = 330

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 10/130 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E ++ +  +L+E    E+ Y      +  VGL
Sbjct: 200 IRDEAVHGYYIGYKYQRGLERVSDAKREEMREYTYNLLNELYDNEVEYTESLYER--VGL 257

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                E+++++  N+    +G   LF       NP     +S   D     +FF    + 
Sbjct: 258 T-DDVEKFLRYNGNKALMNLGYPALFPAEACDVNPAILAALSPNADENH--DFFSGSGSS 314

Query: 116 YQQGAELKWD 125
           Y  G   + D
Sbjct: 315 YVMGKAEETD 324


>gi|224283650|ref|ZP_03646972.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           bifidum NCIMB 41171]
 gi|310288088|ref|YP_003939347.1| Ribonucleoside-diphosphate reductase beta chain [Bifidobacterium
           bifidum S17]
 gi|313140805|ref|ZP_07802998.1| ribonucleoside-diphosphate reductase subunit beta [Bifidobacterium
           bifidum NCIMB 41171]
 gi|309252025|gb|ADO53773.1| Ribonucleoside-diphosphate reductase beta chain [Bifidobacterium
           bifidum S17]
 gi|313133315|gb|EFR50932.1| ribonucleoside-diphosphate reductase subunit beta [Bifidobacterium
           bifidum NCIMB 41171]
          Length = 330

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 10/130 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E ++ +  +L+E    E+ Y      +  VGL
Sbjct: 200 IRDEAVHGYYIGYKYQRGLERVSDAKREEMREYTYNLLNELYDNEVEYTESLYER--VGL 257

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                E+++++  N+    +G   LF       NP     +S   D     +FF    + 
Sbjct: 258 T-DDVEKFLRYNGNKALMNLGYPALFPAEACDVNPAILAALSPNADENH--DFFSGSGSS 314

Query: 116 YQQGAELKWD 125
           Y  G   + D
Sbjct: 315 YVMGKAEETD 324


>gi|329769048|ref|ZP_08260470.1| ribonucleoside-diphosphate reductase [Gemella sanguinis M325]
 gi|328839539|gb|EGF89115.1| ribonucleoside-diphosphate reductase [Gemella sanguinis M325]
          Length = 322

 Score = 48.1 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 49/123 (39%), Gaps = 15/123 (12%)

Query: 3   DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
           DE++H +F      ++   +  E         +++   +L +    E+ Y  +   +  +
Sbjct: 195 DETIHGSFTGFDAQEIFKTLTKEEQEKA----KKEMYKLLLDLYENELKYTQDIYGE--I 248

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEY 116
           GL     + Y+++ ANR    +G    F+  + NP   +   ++   +  +FF  +   Y
Sbjct: 249 GL-YDEVKDYVEYNANRALANLGYPGYFEDKDINPI--IENAMNTSTKNHDFFSVKGDGY 305

Query: 117 QQG 119
              
Sbjct: 306 VVS 308


>gi|322387902|ref|ZP_08061509.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           infantis ATCC 700779]
 gi|321141175|gb|EFX36673.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           infantis ATCC 700779]
          Length = 320

 Score = 47.7 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ +     +L+     E  Y  E++  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKDWMYDLLYTLYENEEGY-TESLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|300859086|ref|YP_003784069.1| ribonucleoside-diphosphate reductase subunit beta [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686540|gb|ADK29462.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302206792|gb|ADL11134.1| Ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           pseudotuberculosis C231]
 gi|302331346|gb|ADL21540.1| Ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           pseudotuberculosis 1002]
 gi|308277038|gb|ADO26937.1| Ribonucleotide reductase, beta subunit [Corynebacterium
           pseudotuberculosis I19]
          Length = 328

 Score = 47.7 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 55/133 (41%), Gaps = 11/133 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      Q   E      +E ++ +  +L++    EI Y  +      +G 
Sbjct: 198 IRDEAVHGYYIGYKYQQAVREQTPERQEELKEYTFDLLYDLYDNEIQYTEDLYDD--LGW 255

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKN--FFETRVTEYQ 117
                ++++++ AN+  + +G E LF   E    P +   +    ++N  FF    + Y 
Sbjct: 256 T-EDVKRFLRYNANKALNNLGYEGLFPADECKVSPAILSALSPNADENHDFFSGSGSSYV 314

Query: 118 QG-----AELKWD 125
            G      +  WD
Sbjct: 315 IGKAENTTDDDWD 327


>gi|320546423|ref|ZP_08040738.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           equinus ATCC 9812]
 gi|320448808|gb|EFW89536.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           equinus ATCC 9812]
          Length = 320

 Score = 47.7 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E       E +     +L++    E  Y         VG 
Sbjct: 189 IRDESVHGTYIGYKFQLGFNELSEDKQDELRDWMYDLLYQLYENEENYTKSLY--DEVGW 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 247 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 296


>gi|49473850|ref|YP_031892.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
           quintana str. Toulouse]
 gi|49239353|emb|CAF25686.1| Ribonucleotide reductase beta-chain [Bartonella quintana str.
           Toulouse]
          Length = 324

 Score = 47.7 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 48/132 (36%), Gaps = 12/132 (9%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          +      +E +  S  +L +   +E  Y  +      +GL
Sbjct: 194 IRDEAVHGYYIGYKFQLGFAKLNESKKQEIKDFSFNLLFDLYNIECKYTEDLY--DALGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115
                + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKVFLHYNANKALMNLGFEPLFPPEVCRVNPAILAALSPSSDENH--DFFSGAGSS 308

Query: 116 YQ--QGAELKWD 125
           Y   +      D
Sbjct: 309 YVIGKAVATTDD 320


>gi|308183791|ref|YP_003927923.1| ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
           plantarum subsp. plantarum ST-III]
 gi|308047717|gb|ADO00260.1| ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
           plantarum subsp. plantarum ST-III]
          Length = 242

 Score = 47.7 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 8/113 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E      K F++    +L +    E A+  E      +GL
Sbjct: 112 IRDESVHGTYLGYKFQLGYNELSATEQKTFKKWMDELLDDLLENEFAFTEEVY--APIGL 169

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEKNFF 109
            A   +Q++ + AN+    +GLE  F   E    NP   M+ +       +FF
Sbjct: 170 -AEDVKQFVHYNANKALQNMGLESRFPNAEIKDINPIV-MNGISTETANHDFF 220


>gi|289178104|gb|ADC85350.1| Ribonucleoside-diphosphate reductase beta chain [Bifidobacterium
           animalis subsp. lactis BB-12]
          Length = 326

 Score = 47.7 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 10/130 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +           E +  +  +L+E    E+ Y H       VGL
Sbjct: 196 IRDEAVHGYYIGYKYQKGLEMASDAKRAEMETYTYDLLNELYENEVEYTHSLY--DEVGL 253

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115
           +    E+++ + AN+    +G   LF       NP     +S   D     +FF    + 
Sbjct: 254 S-DDVEKFLHYNANKALMNLGYPALFPSEICDVNPAILAALSPNADENH--DFFSGSGSS 310

Query: 116 YQQGAELKWD 125
           Y  G   + D
Sbjct: 311 YVMGRAEETD 320


>gi|258423381|ref|ZP_05686272.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A9635]
 gi|257846442|gb|EEV70465.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A9635]
          Length = 323

 Score = 47.7 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 7/109 (6%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DES+H  F       ++ E      ++  Q+   +L++  L E +Y         +G+  
Sbjct: 194 DESIHGVFTGLDAQHLRNELSESEKQKADQEMYKLLNDLYLNEESYTKMLYDD--LGIT- 250

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109
                Y+++  N+    +G EP F+  E NP   +   +D   +  +FF
Sbjct: 251 EDVLNYVKYNGNKALSNLGFEPYFEEREFNPI--IENALDTTTKNHDFF 297


>gi|183601891|ref|ZP_02963260.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|219682805|ref|YP_002469188.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|241190381|ref|YP_002967775.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis Bl-04]
 gi|241195787|ref|YP_002969342.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis DSM 10140]
 gi|183218776|gb|EDT89418.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|219620455|gb|ACL28612.1| ribonucleoside-diphosphate reductase 2 beta chain [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|240248773|gb|ACS45713.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis Bl-04]
 gi|240250341|gb|ACS47280.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis DSM 10140]
 gi|295793368|gb|ADG32903.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis V9]
          Length = 321

 Score = 47.3 bits (112), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 10/130 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +           E +  +  +L+E    E+ Y H       VGL
Sbjct: 191 IRDEAVHGYYIGYKYQKGLEMASDAKRAEMETYTYDLLNELYENEVEYTHSLY--DEVGL 248

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115
           +    E+++ + AN+    +G   LF       NP     +S   D     +FF    + 
Sbjct: 249 S-DDVEKFLHYNANKALMNLGYPALFPSEICDVNPAILAALSPNADENH--DFFSGSGSS 305

Query: 116 YQQGAELKWD 125
           Y  G   + D
Sbjct: 306 YVMGRAEETD 315


>gi|329729655|gb|EGG66056.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus 21193]
          Length = 323

 Score = 47.3 bits (112), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 7/109 (6%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DES+H  F       ++ E      ++  Q+   +L++  L E +Y         +G+  
Sbjct: 194 DESIHGVFTGLDAQHLRNELSESEKQKADQEMYKLLNDLYLNEESYTKMLYDD--LGIT- 250

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109
                Y+++  N+    +G EP F+  E NP   +   +D   +  +FF
Sbjct: 251 EDVLNYVKYNGNKALSNLGFEPYFEEREFNPI--IENALDTTTKNHDFF 297


>gi|190893561|ref|YP_001980103.1| ribonucleoside-diphosphate reductase, beta subunit [Rhizobium etli
           CIAT 652]
 gi|190698840|gb|ACE92925.1| ribonucleoside-diphosphate reductase protein, beta subunit
           [Rhizobium etli CIAT 652]
          Length = 324

 Score = 47.3 bits (112), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          ++ +  +  +L E    E  Y  E +  G +GL
Sbjct: 194 IRDEAVHGYYIGYKFQRGLERLSEERRQQIKDFAFDLLLELYDNEARY-TEALYDG-LGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 308

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 309 YVIGKAVATEDEDWD 323


>gi|15923722|ref|NP_371256.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus Mu50]
 gi|15926409|ref|NP_373942.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus N315]
 gi|21282423|ref|NP_645511.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus MW2]
 gi|49482989|ref|YP_040213.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus MRSA252]
 gi|49485604|ref|YP_042825.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus MSSA476]
 gi|57651569|ref|YP_185668.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus COL]
 gi|82750436|ref|YP_416177.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus RF122]
 gi|87162072|ref|YP_493420.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus USA300_FPR3757]
 gi|88194508|ref|YP_499303.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus NCTC 8325]
 gi|148267192|ref|YP_001246135.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus JH9]
 gi|150393241|ref|YP_001315916.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus JH1]
 gi|151220913|ref|YP_001331735.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus str. Newman]
 gi|156979060|ref|YP_001441319.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus Mu3]
 gi|161508997|ref|YP_001574656.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus USA300_TCH1516]
 gi|221141144|ref|ZP_03565637.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus str. JKD6009]
 gi|253315835|ref|ZP_04839048.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus str. CF-Marseille]
 gi|253731358|ref|ZP_04865523.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus USA300_TCH959]
 gi|253732821|ref|ZP_04866986.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus TCH130]
 gi|255005523|ref|ZP_05144124.2| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus Mu50-omega]
 gi|257424852|ref|ZP_05601279.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus 55/2053]
 gi|257427520|ref|ZP_05603919.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus 65-1322]
 gi|257430151|ref|ZP_05606535.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus 68-397]
 gi|257432852|ref|ZP_05609212.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus E1410]
 gi|257435756|ref|ZP_05611804.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus M876]
 gi|257794947|ref|ZP_05643926.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A9781]
 gi|258418263|ref|ZP_05682528.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A9763]
 gi|258421560|ref|ZP_05684485.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A9719]
 gi|258430755|ref|ZP_05688467.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A9299]
 gi|258441753|ref|ZP_05691025.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A8115]
 gi|258445806|ref|ZP_05693983.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A6300]
 gi|258449617|ref|ZP_05697719.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A6224]
 gi|258452940|ref|ZP_05700934.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A5948]
 gi|258454017|ref|ZP_05701989.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A5937]
 gi|262049516|ref|ZP_06022386.1| ribonucleotide-diphosphate reductase beta subunit [Staphylococcus
           aureus D30]
 gi|262052319|ref|ZP_06024522.1| ribonucleotide-diphosphate reductase beta subunit [Staphylococcus
           aureus 930918-3]
 gi|269202352|ref|YP_003281621.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus ED98]
 gi|282894500|ref|ZP_06302729.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A8117]
 gi|282903362|ref|ZP_06311253.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus C160]
 gi|282905140|ref|ZP_06312998.1| ribonucleoside-diphosphate reductase beta subunit [Staphylococcus
           aureus subsp. aureus Btn1260]
 gi|282908118|ref|ZP_06315949.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus WW2703/97]
 gi|282910377|ref|ZP_06318181.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus WBG10049]
 gi|282913572|ref|ZP_06321361.1| ribonucleoside-diphosphate reductase 2, beta subunit
           [Staphylococcus aureus subsp. aureus M899]
 gi|282918525|ref|ZP_06326262.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus C427]
 gi|282922028|ref|ZP_06329725.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A9765]
 gi|282923491|ref|ZP_06331171.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus C101]
 gi|282926597|ref|ZP_06334227.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A10102]
 gi|283957564|ref|ZP_06375017.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|284023753|ref|ZP_06378151.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus 132]
 gi|293500617|ref|ZP_06666468.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus 58-424]
 gi|293509565|ref|ZP_06668276.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus M809]
 gi|293524151|ref|ZP_06670838.1| ribonucleoside-diphosphate reductase 2, beta subunit
           [Staphylococcus aureus subsp. aureus M1015]
 gi|294849402|ref|ZP_06790145.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A9754]
 gi|295406453|ref|ZP_06816259.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A8819]
 gi|295427309|ref|ZP_06819944.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|296275141|ref|ZP_06857648.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus MR1]
 gi|297208541|ref|ZP_06924970.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus ATCC 51811]
 gi|297245179|ref|ZP_06929053.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A8796]
 gi|297590338|ref|ZP_06948977.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus MN8]
 gi|300912633|ref|ZP_07130076.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus TCH70]
 gi|304381650|ref|ZP_07364299.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus ATCC BAA-39]
 gi|4490610|emb|CAB38643.1| ribonucleotide reductase minor subunit [Staphylococcus aureus]
 gi|13700623|dbj|BAB41920.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
           aureus subsp. aureus N315]
 gi|14246501|dbj|BAB56894.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
           aureus subsp. aureus Mu50]
 gi|14329710|emb|CAC40668.1| ribonucleotide-diphosphate reductase beta chain [Staphylococcus
           aureus]
 gi|21203860|dbj|BAB94559.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
           aureus subsp. aureus MW2]
 gi|49241118|emb|CAG39796.1| ribonucleoside-diphosphate reductase beta chain [Staphylococcus
           aureus subsp. aureus MRSA252]
 gi|49244047|emb|CAG42473.1| ribonucleoside-diphosphate reductase beta chain [Staphylococcus
           aureus subsp. aureus MSSA476]
 gi|57285755|gb|AAW37849.1| ribonucleoside-diphosphate reductase 2, beta subunit
           [Staphylococcus aureus subsp. aureus COL]
 gi|82655967|emb|CAI80371.1| ribonucelotide diphosphate reductase beta chain [Staphylococcus
           aureus RF122]
 gi|87128046|gb|ABD22560.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus USA300_FPR3757]
 gi|87202066|gb|ABD29876.1| ribonucleotide-disphosphate reductase beta chain, putative
           [Staphylococcus aureus subsp. aureus NCTC 8325]
 gi|147740261|gb|ABQ48559.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Staphylococcus aureus subsp. aureus JH9]
 gi|149945693|gb|ABR51629.1| Ribonucleoside-diphosphate reductase [Staphylococcus aureus subsp.
           aureus JH1]
 gi|150373713|dbj|BAF66973.1| ribonucleotide-diphosphate reductase beta chain [Staphylococcus
           aureus subsp. aureus str. Newman]
 gi|156721195|dbj|BAF77612.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
           aureus subsp. aureus Mu3]
 gi|160367806|gb|ABX28777.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus USA300_TCH1516]
 gi|253724883|gb|EES93612.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus USA300_TCH959]
 gi|253729186|gb|EES97915.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus TCH130]
 gi|257272422|gb|EEV04545.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus 55/2053]
 gi|257275713|gb|EEV07186.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus 65-1322]
 gi|257279348|gb|EEV09949.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus 68-397]
 gi|257282267|gb|EEV12402.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus E1410]
 gi|257284947|gb|EEV15066.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus M876]
 gi|257788919|gb|EEV27259.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A9781]
 gi|257839056|gb|EEV63535.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A9763]
 gi|257842486|gb|EEV66910.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A9719]
 gi|257849427|gb|EEV73397.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A9299]
 gi|257852222|gb|EEV76149.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A8115]
 gi|257855382|gb|EEV78320.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A6300]
 gi|257857125|gb|EEV80024.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A6224]
 gi|257859451|gb|EEV82305.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A5948]
 gi|257863882|gb|EEV86638.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A5937]
 gi|259159759|gb|EEW44800.1| ribonucleotide-diphosphate reductase beta subunit [Staphylococcus
           aureus 930918-3]
 gi|259162352|gb|EEW46924.1| ribonucleotide-diphosphate reductase beta subunit [Staphylococcus
           aureus D30]
 gi|262074642|gb|ACY10615.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus ED98]
 gi|269940309|emb|CBI48686.1| ribonucleoside-diphosphate reductase beta chain [Staphylococcus
           aureus subsp. aureus TW20]
 gi|282314359|gb|EFB44749.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus C101]
 gi|282317659|gb|EFB48031.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus C427]
 gi|282322604|gb|EFB52926.1| ribonucleoside-diphosphate reductase 2, beta subunit
           [Staphylococcus aureus subsp. aureus M899]
 gi|282325769|gb|EFB56077.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus WBG10049]
 gi|282327783|gb|EFB58065.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus WW2703/97]
 gi|282331965|gb|EFB61476.1| ribonucleoside-diphosphate reductase beta subunit [Staphylococcus
           aureus subsp. aureus Btn1260]
 gi|282591490|gb|EFB96562.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A10102]
 gi|282593686|gb|EFB98678.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A9765]
 gi|282596317|gb|EFC01278.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus C160]
 gi|282763213|gb|EFC03344.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A8117]
 gi|283470026|emb|CAQ49237.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus ST398]
 gi|283791015|gb|EFC29830.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|285816434|gb|ADC36921.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
           [Staphylococcus aureus 04-02981]
 gi|290921114|gb|EFD98175.1| ribonucleoside-diphosphate reductase 2, beta subunit
           [Staphylococcus aureus subsp. aureus M1015]
 gi|291095622|gb|EFE25883.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus 58-424]
 gi|291467662|gb|EFF10177.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus M809]
 gi|294823934|gb|EFG40360.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A9754]
 gi|294968598|gb|EFG44621.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A8819]
 gi|295128697|gb|EFG58328.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|296886796|gb|EFH25700.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus ATCC 51811]
 gi|297177850|gb|EFH37099.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A8796]
 gi|297576637|gb|EFH95352.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus MN8]
 gi|298694063|gb|ADI97285.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus subsp.
           aureus ED133]
 gi|300886879|gb|EFK82081.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus TCH70]
 gi|302332442|gb|ADL22635.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus JKD6159]
 gi|302750629|gb|ADL64806.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus str. JKD6008]
 gi|304339753|gb|EFM05698.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus ATCC BAA-39]
 gi|312438843|gb|ADQ77914.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus TCH60]
 gi|312829224|emb|CBX34066.1| ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide
           reductase small subunit) [Staphylococcus aureus subsp.
           aureus ECT-R 2]
 gi|315129414|gb|EFT85407.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus CGS03]
 gi|315194351|gb|EFU24743.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus CGS00]
 gi|315196404|gb|EFU26755.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus CGS01]
 gi|320139937|gb|EFW31798.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus MRSA131]
 gi|320141974|gb|EFW33802.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus MRSA177]
 gi|323438919|gb|EGA96654.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus O11]
 gi|323441867|gb|EGA99507.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus O46]
 gi|329313453|gb|AEB87866.1| Ribonucleoside-diphosphate reductase class Ib beta subunit
           [Staphylococcus aureus subsp. aureus T0131]
 gi|329724628|gb|EGG61135.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus 21172]
 gi|329728537|gb|EGG64970.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus 21189]
          Length = 323

 Score = 47.3 bits (112), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 7/109 (6%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DES+H  F       ++ E      ++  Q+   +L++  L E +Y         +G+  
Sbjct: 194 DESIHGVFTGLDAQHLRNELSESEKQKADQEMYKLLNDLYLNEESYTKMLYDD--LGIT- 250

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109
                Y+++  N+    +G EP F+  E NP   +   +D   +  +FF
Sbjct: 251 EDVLNYVKYNGNKALSNLGFEPYFEEREFNPI--IENALDTTTKNHDFF 297


>gi|282916074|ref|ZP_06323837.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus D139]
 gi|283769895|ref|ZP_06342787.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus H19]
 gi|282320022|gb|EFB50369.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus D139]
 gi|283460042|gb|EFC07132.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus H19]
          Length = 323

 Score = 47.3 bits (112), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 7/109 (6%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DES+H  F       ++ E      ++  Q+   +L++  L E +Y         +G+  
Sbjct: 194 DESIHGVFTGLDAQHLRNELSESEKQKADQEMYKLLNDLYLNEESYTKMLYDD--LGIT- 250

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109
                Y+++  N+    +G EP F+  E NP   +   +D   +  +FF
Sbjct: 251 EDVLNYVKYNGNKALSNLGFEPYFEEREFNPI--IENALDTTTKNHDFF 297


>gi|148994532|ref|ZP_01823712.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae SP9-BS68]
 gi|147927202|gb|EDK78238.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae SP9-BS68]
          Length = 319

 Score = 47.3 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y  E++  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNMGQDPLFPDSAEDVNPIV-MNGISTGTSNHDFF 295


>gi|168489010|ref|ZP_02713209.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP195]
 gi|183572389|gb|EDT92917.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP195]
 gi|332073523|gb|EGI84002.1| ribonucleotide reductase, small chain family protein [Streptococcus
           pneumoniae GA17570]
          Length = 320

 Score = 47.3 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y  E++  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNMGQDPLFPDSAEDVNPIV-MNGISTGTSNHDFF 295


>gi|225860977|ref|YP_002742486.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|298229749|ref|ZP_06963430.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae str. Canada MDR_19F]
 gi|298255394|ref|ZP_06978980.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae str. Canada MDR_19A]
 gi|298502819|ref|YP_003724759.1| ribonucleoside-diphosphate reductase [Streptococcus pneumoniae
           TCH8431/19A]
 gi|225727952|gb|ACO23803.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|298238414|gb|ADI69545.1| ribonucleoside-diphosphate reductase [Streptococcus pneumoniae
           TCH8431/19A]
 gi|327389423|gb|EGE87768.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Streptococcus pneumoniae GA04375]
          Length = 320

 Score = 47.3 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y  E++  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNMGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|149013339|ref|ZP_01834070.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae SP19-BS75]
 gi|147762929|gb|EDK69876.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae SP19-BS75]
          Length = 320

 Score = 47.3 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y  E++  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNMGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|15901045|ref|NP_345649.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae TIGR4]
 gi|111657123|ref|ZP_01407908.1| hypothetical protein SpneT_02001649 [Streptococcus pneumoniae
           TIGR4]
 gi|14972661|gb|AAK75289.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           pneumoniae TIGR4]
          Length = 320

 Score = 47.3 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y  E++  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNMGQDPLFPDSAEDVNPIV-MNGISTGTSNHDFF 295


>gi|300741626|ref|ZP_07071647.1| ribonucleoside-diphosphate reductase, beta subunit [Rothia
           dentocariosa M567]
 gi|300380811|gb|EFJ77373.1| ribonucleoside-diphosphate reductase, beta subunit [Rothia
           dentocariosa M567]
          Length = 325

 Score = 47.3 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 57/133 (42%), Gaps = 11/133 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +       E ++ +  +L+E    E+AY H ++  G  G 
Sbjct: 195 IRDEAVHGYYIGYKFQRGLAKESPERQAELKEYTFNLLYELYENEVAYTH-SLYDGV-GW 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKN--FFETRVTEYQ 117
           +    ++++ + AN+    +G E +F  +  N  P +   +    ++N  FF    + Y 
Sbjct: 253 S-EDVKKFLHYNANKALMNLGYEAMFPASVTNVSPAILSALSPNADENHDFFSGSGSSYV 311

Query: 118 QGAEL-----KWD 125
            G  +      WD
Sbjct: 312 IGKAVNTEDEDWD 324


>gi|149004132|ref|ZP_01828935.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP14-BS69]
 gi|237649545|ref|ZP_04523797.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae CCRI 1974]
 gi|237822455|ref|ZP_04598300.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae CCRI 1974M2]
 gi|147757865|gb|EDK64875.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP14-BS69]
          Length = 320

 Score = 47.3 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y  E++  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNMGQDPLFPDSAEDVNPIV-MNGISTGTSNHDFF 295


>gi|15903110|ref|NP_358660.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae R6]
 gi|116517162|ref|YP_816517.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae D39]
 gi|148985789|ref|ZP_01818917.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP3-BS71]
 gi|148990437|ref|ZP_01821595.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP6-BS73]
 gi|148999044|ref|ZP_01826476.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP11-BS70]
 gi|149008157|ref|ZP_01831676.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae SP18-BS74]
 gi|149026429|ref|ZP_01836566.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP23-BS72]
 gi|168483243|ref|ZP_02708195.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC1873-00]
 gi|168486506|ref|ZP_02711014.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC1087-00]
 gi|168491101|ref|ZP_02715244.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC0288-04]
 gi|168493105|ref|ZP_02717248.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC3059-06]
 gi|168577270|ref|ZP_02723064.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae MLV-016]
 gi|169833110|ref|YP_001694622.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae Hungary19A-6]
 gi|182684087|ref|YP_001835834.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae CGSP14]
 gi|194397329|ref|YP_002037788.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae G54]
 gi|225854653|ref|YP_002736165.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae JJA]
 gi|225856856|ref|YP_002738367.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae P1031]
 gi|225858968|ref|YP_002740478.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae 70585]
 gi|303255568|ref|ZP_07341620.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae BS455]
 gi|303260588|ref|ZP_07346554.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae SP-BS293]
 gi|303262722|ref|ZP_07348661.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae SP14-BS292]
 gi|303265256|ref|ZP_07351167.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae BS397]
 gi|303267603|ref|ZP_07353445.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae BS457]
 gi|303269940|ref|ZP_07355678.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae BS458]
 gi|307067834|ref|YP_003876800.1| ribonucleotide reductase subunit beta [Streptococcus pneumoniae
           AP200]
 gi|307127225|ref|YP_003879256.1| ribonucleoside-diphosphate reductase subunit beta [Streptococcus
           pneumoniae 670-6B]
 gi|15458689|gb|AAK99870.1| Nonessential ribonucleoside-diP reductase 2, subunit beta, class I,
           function unknown [Streptococcus pneumoniae R6]
 gi|116077738|gb|ABJ55458.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae D39]
 gi|147755114|gb|EDK62169.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP11-BS70]
 gi|147760396|gb|EDK67375.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae SP18-BS74]
 gi|147922093|gb|EDK73216.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP3-BS71]
 gi|147924289|gb|EDK75383.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP6-BS73]
 gi|147929260|gb|EDK80261.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP23-BS72]
 gi|168995612|gb|ACA36224.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae Hungary19A-6]
 gi|172043347|gb|EDT51393.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC1873-00]
 gi|182629421|gb|ACB90369.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae CGSP14]
 gi|183570430|gb|EDT90958.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC1087-00]
 gi|183574343|gb|EDT94871.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC0288-04]
 gi|183576617|gb|EDT97145.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC3059-06]
 gi|183577169|gb|EDT97697.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae MLV-016]
 gi|194356996|gb|ACF55444.1| ribonucleoside-diphosphate reductase beta subunit [Streptococcus
           pneumoniae G54]
 gi|225720498|gb|ACO16352.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae 70585]
 gi|225724090|gb|ACO19943.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae JJA]
 gi|225725515|gb|ACO21367.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae P1031]
 gi|301794279|emb|CBW36700.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus pneumoniae INV104]
 gi|301800116|emb|CBW32717.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus pneumoniae OXC141]
 gi|301801954|emb|CBW34682.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus pneumoniae INV200]
 gi|302597474|gb|EFL64568.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae BS455]
 gi|302636154|gb|EFL66650.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae SP14-BS292]
 gi|302638301|gb|EFL68770.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae SP-BS293]
 gi|302640522|gb|EFL70931.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae BS458]
 gi|302642869|gb|EFL73174.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae BS457]
 gi|302645227|gb|EFL75463.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae BS397]
 gi|306409371|gb|ADM84798.1| Ribonucleotide reductase, beta subunit [Streptococcus pneumoniae
           AP200]
 gi|306484287|gb|ADM91156.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae 670-6B]
 gi|332074795|gb|EGI85267.1| ribonucleotide reductase, small chain family protein [Streptococcus
           pneumoniae GA41301]
 gi|332075112|gb|EGI85583.1| ribonucleotide reductase, small chain family protein [Streptococcus
           pneumoniae GA17545]
 gi|332200632|gb|EGJ14704.1| ribonucleotide reductase, small chain family protein [Streptococcus
           pneumoniae GA41317]
 gi|332201651|gb|EGJ15721.1| ribonucleotide reductase, small chain family protein [Streptococcus
           pneumoniae GA47368]
 gi|332203034|gb|EGJ17102.1| ribonucleotide reductase, small chain family protein [Streptococcus
           pneumoniae GA47901]
          Length = 320

 Score = 47.3 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y  E++  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNMGQDPLFPDSAEDVNPIV-MNGISTGTSNHDFF 295


>gi|260904342|ref|ZP_05912664.1| ribonucleotide-diphosphate reductase subunit beta [Brevibacterium
           linens BL2]
          Length = 326

 Score = 47.3 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 52/132 (39%), Gaps = 12/132 (9%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  ++ E    E+AY H+      VGL
Sbjct: 196 IRDEAVHGYYIGYKYQKGLESQSEERKQELKDYTMNLMFELYENEVAYTHDLY--DSVGL 253

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A  C+ ++ + AN+    +G E +F       NP     +S   D     +FF    + 
Sbjct: 254 -AEDCKMFLHYNANKALMNLGYEAMFPKEVTEVNPAILAALSPNSDENH--DFFSGSGSS 310

Query: 116 YQ--QGAELKWD 125
           Y   +    + D
Sbjct: 311 YVIGKAENTEDD 322


>gi|38234491|ref|NP_940258.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           diphtheriae NCTC 13129]
 gi|38200754|emb|CAE50457.1| ribonucleoside-diphosphate reductase beta chain 2 [Corynebacterium
           diphtheriae]
          Length = 341

 Score = 47.0 bits (111), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 48/141 (34%), Gaps = 20/141 (14%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-----K 55
           +RD+++H  +      +     P     E  + + ++  E   +E AY  +         
Sbjct: 204 LRDKAVHGYYSGYKYQRGLELKPERAN-EMAEFTYSLCDELLDMEKAYTADLYAPADQAN 262

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL------KKEKNFF 109
              GL       ++ + A++    +G EP ++        +S  I         +  +FF
Sbjct: 263 ALEGLTLDGVMSFVYYNADKALMNLGYEPAYEEQA---AHVSPEIIAALTPESNETHDFF 319

Query: 110 ETRVTEYQQGAELK-----WD 125
               + Y  G   +     WD
Sbjct: 320 SGSGSAYIIGTAEETTEEDWD 340


>gi|306840845|ref|ZP_07473592.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
           BO2]
 gi|306289240|gb|EFM60489.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
           BO2]
          Length = 327

 Score = 47.0 bits (111), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 10/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E+ Y  E +  G  GL
Sbjct: 197 IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEALYDGV-GL 254

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 255 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 311

Query: 116 YQQGAEL 122
           Y  G  +
Sbjct: 312 YVIGKAV 318


>gi|222102712|ref|YP_002539751.1| ribonucleoside-diphosphate reductase 2 beta chain [Agrobacterium
           vitis S4]
 gi|221739313|gb|ACM40046.1| ribonucleoside-diphosphate reductase 2 beta chain [Agrobacterium
           vitis S4]
          Length = 329

 Score = 47.0 bits (111), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 50/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E  Y  E +  G  GL
Sbjct: 199 IRDEAVHGYYIGYKFQRGLEPLSEEQRQETKDFAFDLLLELYDNEAKY-TEALYDGV-GL 256

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 257 T-EDVKKFLHYNANKALMNLGYEALFPPEACKVNPAILSALSPNADENH--DFFSGSGSS 313

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 314 YVIGKAVATEDEDWD 328


>gi|221231890|ref|YP_002511042.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pneumoniae ATCC 700669]
 gi|220674350|emb|CAR68896.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus pneumoniae ATCC 700669]
          Length = 320

 Score = 47.0 bits (111), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ ++    +L+     E  Y  E++  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNMGQDPLFPDSAEDVNPIV-MNGISTGTSNHDFF 295


>gi|261753311|ref|ZP_05997020.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
           bv. 3 str. 686]
 gi|261743064|gb|EEY30990.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
           bv. 3 str. 686]
          Length = 327

 Score = 47.0 bits (111), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 10/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E+ Y  E +  G  GL
Sbjct: 197 IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEALYDGV-GL 254

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 255 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 311

Query: 116 YQQGAEL 122
           Y  G  +
Sbjct: 312 YVIGKAV 318


>gi|218680499|ref|ZP_03528396.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium etli
           CIAT 894]
          Length = 324

 Score = 47.0 bits (111), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 49/135 (36%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E  Y      +  VGL
Sbjct: 194 IRDEAVHGYYIGYKFQRGLELLGEERRQELKDFAFDLLLELYDNEARYTEALYDR--VGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKEFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 308

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 309 YVIGKAVATEDEDWD 323


>gi|225686158|ref|YP_002734130.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis ATCC 23457]
 gi|256043236|ref|ZP_05446173.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|256262715|ref|ZP_05465247.1| ribonucleotide reductase [Brucella melitensis bv. 2 str. 63/9]
 gi|260564448|ref|ZP_05834933.1| ribonucleotide reductase [Brucella melitensis bv. 1 str. 16M]
 gi|265989661|ref|ZP_06102218.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|225642263|gb|ACO02176.1| Ribonucleoside-diphosphate reductase [Brucella melitensis ATCC
           23457]
 gi|260152091|gb|EEW87184.1| ribonucleotide reductase [Brucella melitensis bv. 1 str. 16M]
 gi|263000330|gb|EEZ13020.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|263092503|gb|EEZ16756.1| ribonucleotide reductase [Brucella melitensis bv. 2 str. 63/9]
 gi|326410495|gb|ADZ67559.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis M28]
 gi|326553787|gb|ADZ88426.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis M5-90]
          Length = 329

 Score = 47.0 bits (111), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 10/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E+ Y  E +  G  GL
Sbjct: 199 IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEALYDGV-GL 256

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 257 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 313

Query: 116 YQQGAEL 122
           Y  G  +
Sbjct: 314 YVIGKAV 320


>gi|163844498|ref|YP_001622153.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
           ATCC 23445]
 gi|163675221|gb|ABY39331.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 329

 Score = 47.0 bits (111), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 10/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E+ Y  E +  G  GL
Sbjct: 199 IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEALYDGV-GL 256

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 257 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 313

Query: 116 YQQGAEL 122
           Y  G  +
Sbjct: 314 YVIGKAV 320


>gi|289804144|ref|ZP_06534773.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 130

 Score = 47.0 bits (111), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 4/49 (8%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEI 46
           RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E 
Sbjct: 77  RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEK 125


>gi|312865304|ref|ZP_07725532.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           downei F0415]
 gi|311099415|gb|EFQ57631.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           downei F0415]
          Length = 316

 Score = 47.0 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 10/114 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +      Q   E       +FQ+     L E    E AY  E      +GL
Sbjct: 186 IRDESVHGTYLGYKFRQGFDELSPEDQADFQKWMYGFLDELLENEFAYTEEVYSD--IGL 243

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEK-NFF 109
                + ++++ AN+    +G    F+       NP   +   I ++    +FF
Sbjct: 244 -EDDIKTFVKYNANKSLQNMGFGIYFENATANDVNPI--VMNGISIETANHDFF 294


>gi|297567587|ref|YP_003686558.1| hypothetical protein Mesil_3232 [Meiothermus silvanus DSM 9946]
 gi|297567764|ref|YP_003686735.1| hypothetical protein Mesil_3416 [Meiothermus silvanus DSM 9946]
 gi|296852036|gb|ADH65050.1| hypothetical protein Mesil_3232 [Meiothermus silvanus DSM 9946]
 gi|296852213|gb|ADH65227.1| hypothetical protein Mesil_3416 [Meiothermus silvanus DSM 9946]
          Length = 323

 Score = 47.0 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 9/123 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +   +  Q+    P       +   R  L + + LE AY  E      +G 
Sbjct: 189 LRDEAIHGVYVGMLAQQVYARLPEGEQSRLRTALREDLEKLSALEEAYTEELY--APIG- 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEY 116
                 ++ ++ A++    +G  P F       NP   +   I L+ +  +FF T+   Y
Sbjct: 246 RVEEVRRFCRYNADKALMNLGQPPYFGVRAEEVNPV--VLAGISLRTKNHDFFSTKGNGY 303

Query: 117 QQG 119
            + 
Sbjct: 304 VKA 306


>gi|23500072|ref|NP_699512.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
           1330]
 gi|62317763|ref|YP_223616.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 1 str. 9-941]
 gi|83269749|ref|YP_419040.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis biovar Abortus 2308]
 gi|148558197|ref|YP_001257348.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ovis
           ATCC 25840]
 gi|161620390|ref|YP_001594276.1| ribonucleotide-diphosphate reductase subunit beta [Brucella canis
           ATCC 23365]
 gi|189023015|ref|YP_001932756.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           S19]
 gi|254691263|ref|ZP_05154517.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 6 str. 870]
 gi|254695435|ref|ZP_05157263.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 3 str. Tulya]
 gi|254699051|ref|ZP_05160879.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|254699599|ref|ZP_05161427.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
           bv. 5 str. 513]
 gi|254706144|ref|ZP_05167972.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           pinnipedialis M163/99/10]
 gi|254711557|ref|ZP_05173368.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           pinnipedialis B2/94]
 gi|254712154|ref|ZP_05173965.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           M644/93/1]
 gi|254715225|ref|ZP_05177036.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           M13/05/1]
 gi|254720036|ref|ZP_05181847.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
           83/13]
 gi|254732497|ref|ZP_05191075.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 4 str. 292]
 gi|256029807|ref|ZP_05443421.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           pinnipedialis M292/94/1]
 gi|256059454|ref|ZP_05449656.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           neotomae 5K33]
 gi|256157977|ref|ZP_05455895.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           M490/95/1]
 gi|256253064|ref|ZP_05458600.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           B1/94]
 gi|256256449|ref|ZP_05461985.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 9 str. C68]
 gi|260167086|ref|ZP_05753897.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
           F5/99]
 gi|260544998|ref|ZP_05820819.1| ribonucleotide reductase [Brucella abortus NCTC 8038]
 gi|260568371|ref|ZP_05838840.1| ribonucleotide reductase [Brucella suis bv. 4 str. 40]
 gi|260756870|ref|ZP_05869218.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 6 str. 870]
 gi|260760301|ref|ZP_05872649.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 4 str. 292]
 gi|260763541|ref|ZP_05875873.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260882684|ref|ZP_05894298.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 9 str. C68]
 gi|261215815|ref|ZP_05930096.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 3 str. Tulya]
 gi|261216944|ref|ZP_05931225.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           M13/05/1]
 gi|261220160|ref|ZP_05934441.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           B1/94]
 gi|261313587|ref|ZP_05952784.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           pinnipedialis M163/99/10]
 gi|261319174|ref|ZP_05958371.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           pinnipedialis B2/94]
 gi|261319814|ref|ZP_05959011.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           M644/93/1]
 gi|261323425|ref|ZP_05962622.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           neotomae 5K33]
 gi|261750056|ref|ZP_05993765.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
           bv. 5 str. 513]
 gi|261756480|ref|ZP_06000189.1| ribonucleotide reductase [Brucella sp. F5/99]
 gi|265985045|ref|ZP_06097780.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
           83/13]
 gi|265986823|ref|ZP_06099380.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           pinnipedialis M292/94/1]
 gi|265996493|ref|ZP_06109050.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           M490/95/1]
 gi|297249809|ref|ZP_06933510.1| ribonucleoside-diphosphate reductase, beta subunit [Brucella
           abortus bv. 5 str. B3196]
 gi|306839412|ref|ZP_07472226.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp. NF
           2653]
 gi|306845616|ref|ZP_07478185.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
           BO1]
 gi|23463663|gb|AAN33517.1| ribonucleoside-diphosphate reductase, beta subunit [Brucella suis
           1330]
 gi|62197956|gb|AAX76255.1| NrdF, ribonucleoside-diphosphate reductase, beta subunit [Brucella
           abortus bv. 1 str. 9-941]
 gi|82940023|emb|CAJ13054.1| Ribonucleotide reductase [Brucella melitensis biovar Abortus 2308]
 gi|148369482|gb|ABQ62354.1| ribonucleoside-diphosphate reductase, beta subunit [Brucella ovis
           ATCC 25840]
 gi|161337201|gb|ABX63505.1| Ribonucleoside-diphosphate reductase [Brucella canis ATCC 23365]
 gi|189021589|gb|ACD74310.1| Ribonucleotide reductase [Brucella abortus S19]
 gi|260098269|gb|EEW82143.1| ribonucleotide reductase [Brucella abortus NCTC 8038]
 gi|260155036|gb|EEW90117.1| ribonucleotide reductase [Brucella suis bv. 4 str. 40]
 gi|260670619|gb|EEX57559.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 4 str. 292]
 gi|260673962|gb|EEX60783.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260676978|gb|EEX63799.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 6 str. 870]
 gi|260872212|gb|EEX79281.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 9 str. C68]
 gi|260917422|gb|EEX84283.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 3 str. Tulya]
 gi|260918744|gb|EEX85397.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           B1/94]
 gi|260922033|gb|EEX88601.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           M13/05/1]
 gi|261292504|gb|EEX96000.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           M644/93/1]
 gi|261298397|gb|EEY01894.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           pinnipedialis B2/94]
 gi|261299405|gb|EEY02902.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           neotomae 5K33]
 gi|261302613|gb|EEY06110.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           pinnipedialis M163/99/10]
 gi|261736464|gb|EEY24460.1| ribonucleotide reductase [Brucella sp. F5/99]
 gi|261739809|gb|EEY27735.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
           bv. 5 str. 513]
 gi|262550790|gb|EEZ06951.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           M490/95/1]
 gi|264659020|gb|EEZ29281.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           pinnipedialis M292/94/1]
 gi|264663637|gb|EEZ33898.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
           83/13]
 gi|297173678|gb|EFH33042.1| ribonucleoside-diphosphate reductase, beta subunit [Brucella
           abortus bv. 5 str. B3196]
 gi|306273937|gb|EFM55764.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
           BO1]
 gi|306405535|gb|EFM61800.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp. NF
           2653]
          Length = 329

 Score = 47.0 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 10/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E+ Y  E +  G  GL
Sbjct: 199 IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEALYDGV-GL 256

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 257 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 313

Query: 116 YQQGAEL 122
           Y  G  +
Sbjct: 314 YVIGKAV 320


>gi|322391986|ref|ZP_08065450.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           peroris ATCC 700780]
 gi|321145212|gb|EFX40609.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           peroris ATCC 700780]
          Length = 320

 Score = 47.0 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ +     +L+     E  Y         VG 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPQDEQEKLKDWMYDLLYTLYENEEGYTESLY--DTVGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|319891738|ref|YP_004148613.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
           [Staphylococcus pseudintermedius HKU10-03]
 gi|317161434|gb|ADV04977.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
           [Staphylococcus pseudintermedius HKU10-03]
 gi|323465093|gb|ADX77246.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           pseudintermedius ED99]
          Length = 320

 Score = 47.0 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 44/109 (40%), Gaps = 7/109 (6%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DES+H  F       ++ E      ++  ++   +L +    E +Y         +GL  
Sbjct: 194 DESIHGVFTGLDAQSLRNELSESEKQKADKEMYQLLEDLYANEASYTRSLY--DPIGLTD 251

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109
                Y+++  N+    +G EP F+  E +P   +   +D   +  +FF
Sbjct: 252 DVMN-YVRYNGNKALSNLGFEPYFEEREFSPI--IENALDTSTKNHDFF 297


>gi|24379140|ref|NP_721095.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           mutans UA159]
 gi|290580850|ref|YP_003485242.1| putative ribonucleotide reductase small subunit [Streptococcus
           mutans NN2025]
 gi|24377045|gb|AAN58401.1|AE014910_5 putative ribonucleotide reductase, small subunit [Streptococcus
           mutans UA159]
 gi|254997749|dbj|BAH88350.1| putative ribonucleotide reductase small subunit [Streptococcus
           mutans NN2025]
          Length = 319

 Score = 47.0 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E       EF+     +L++    E  Y         VG 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELSEEEQSEFRDWMYDLLYQLYENEELYTQTLY--DPVGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|213855387|ref|ZP_03383627.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. M223]
          Length = 160

 Score = 46.6 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 4/49 (8%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEI 46
           RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E 
Sbjct: 101 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEK 149


>gi|297570727|ref|YP_003696501.1| ribonucleoside-diphosphate reductase [Arcanobacterium haemolyticum
           DSM 20595]
 gi|296931074|gb|ADH91882.1| Ribonucleoside-diphosphate reductase [Arcanobacterium haemolyticum
           DSM 20595]
          Length = 324

 Score = 46.6 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 47/135 (34%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      Q           E    + ++L +    E  Y         +GL
Sbjct: 194 IRDEAVHGYYIGYKYQQAVKRASAERQAELMDYTYSLLEDLYENEEGYTESLY--DEMGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                + ++++ AN+    +G E LF   +   NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKMFLRYNANKALMNLGYEALFPADQTAVNPAILAALSPNADENH--DFFSGSGSS 308

Query: 116 YQQGAE-----LKWD 125
           Y  G         WD
Sbjct: 309 YVIGTAEATEDEDWD 323


>gi|254702722|ref|ZP_05164550.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
           bv. 3 str. 686]
          Length = 335

 Score = 46.6 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 10/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E+ Y  E +  G  GL
Sbjct: 205 IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEALYDGV-GL 262

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 263 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 319

Query: 116 YQQGAEL 122
           Y  G  +
Sbjct: 320 YVIGKAV 326


>gi|17989274|ref|NP_541907.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis bv. 1 str. 16M]
 gi|17985137|gb|AAL54171.1| ribonucleoside-diphosphate reductase beta chain [Brucella
           melitensis bv. 1 str. 16M]
          Length = 335

 Score = 46.6 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 10/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E+ Y  E +  G  GL
Sbjct: 205 IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEALYDGV-GL 262

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 263 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 319

Query: 116 YQQGAEL 122
           Y  G  +
Sbjct: 320 YVIGKAV 326


>gi|225351964|ref|ZP_03742987.1| hypothetical protein BIFPSEUDO_03569 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157211|gb|EEG70550.1| hypothetical protein BIFPSEUDO_03569 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 330

 Score = 46.6 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 10/130 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +           E +  +  +L+E    E+ Y         VGL
Sbjct: 200 IRDEAVHGYYIGYKYQKGLELVSEDKRGELRDYTYDLLNELYDNEVEYTRSLY--EPVGL 257

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115
                E+++++  N+    +G   LF       NP     +S   D     +FF    + 
Sbjct: 258 T-QDVEKFLRYNGNKALMNLGYPALFPQEICDVNPSILAALSPNADENH--DFFSGSGSS 314

Query: 116 YQQGAELKWD 125
           Y  G  ++ D
Sbjct: 315 YVMGKSVETD 324


>gi|145296522|ref|YP_001139343.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           glutamicum R]
 gi|140846442|dbj|BAF55441.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 334

 Score = 46.6 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 53/132 (40%), Gaps = 12/132 (9%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E ++ +  +L++    E  Y+ +      +G 
Sbjct: 204 IRDEAVHGYYIGYKYQKAVAKETPERQEELKEYTFDLLYDLYDNETQYSEDLYDD--LGW 261

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----NPFPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+  + +G E LF   E     N    +S   D     +FF    + 
Sbjct: 262 T-EDVKRFLRYNANKALNNLGYEGLFPADETKVSPNILSALSPNADENH--DFFSGSGSS 318

Query: 116 YQ--QGAELKWD 125
           Y   +    + D
Sbjct: 319 YVIGKAENTEDD 330


>gi|19553723|ref|NP_601725.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           glutamicum ATCC 13032]
 gi|62391364|ref|YP_226766.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           glutamicum ATCC 13032]
 gi|15430572|dbj|BAB64405.1| ribonucleoside diphosphate reductase [Corynebacterium glutamicum]
 gi|21325297|dbj|BAB99918.1| Ribonucleotide reductase beta subunit [Corynebacterium glutamicum
           ATCC 13032]
 gi|41326705|emb|CAF21187.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 2 BETA CHAIN [Corynebacterium
           glutamicum ATCC 13032]
          Length = 334

 Score = 46.6 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 53/132 (40%), Gaps = 12/132 (9%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E ++ +  +L++    E  Y+ +      +G 
Sbjct: 204 IRDEAVHGYYIGYKYQKAVAKETPERQEELKEYTFDLLYDLYDNETQYSEDLYDD--LGW 261

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----NPFPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+  + +G E LF   E     N    +S   D     +FF    + 
Sbjct: 262 T-EDVKRFLRYNANKALNNLGYEGLFPADETKVSPNILSALSPNADENH--DFFSGSGSS 318

Query: 116 YQ--QGAELKWD 125
           Y   +    + D
Sbjct: 319 YVIGKAENTEDD 330


>gi|319404590|emb|CBI78196.1| ribonucleoside-diphosphate reductase beta chain [Bartonella
           rochalimae ATCC BAA-1498]
 gi|319407580|emb|CBI81230.1| ribonucleoside-diphosphate reductase beta chain [Bartonella sp.
           1-1C]
          Length = 324

 Score = 46.6 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 10/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          +      +E +  +  +L +   +E  Y  +      +GL
Sbjct: 194 IRDEAVHGYYIGYKFQLGFAKLDEAKKQEIKDFAFNLLFDLYNIECKYTEDLY--DAIGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115
                + ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKVFLHYNANKALMNLGFEALFPPEVCRVNPAILAALSPNSDENH--DFFSGSGSS 308

Query: 116 YQQGAEL 122
           Y  G  +
Sbjct: 309 YVIGKAV 315


>gi|225628773|ref|ZP_03786807.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           str. Cudo]
 gi|237817303|ref|ZP_04596295.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           str. 2308 A]
 gi|225616619|gb|EEH13667.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           str. Cudo]
 gi|237788116|gb|EEP62332.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           str. 2308 A]
          Length = 335

 Score = 46.6 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 10/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E+ Y  E +  G  GL
Sbjct: 205 IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEALYDGV-GL 262

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 263 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 319

Query: 116 YQQGAEL 122
           Y  G  +
Sbjct: 320 YVIGKAV 326


>gi|268590425|ref|ZP_06124646.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rettgeri DSM 1131]
 gi|291314339|gb|EFE54792.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rettgeri DSM 1131]
          Length = 323

 Score = 46.6 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 53/136 (38%), Gaps = 20/136 (14%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      KE +  S ++L +    E+ Y  E      VG 
Sbjct: 193 IRDEAIHGYYIGYKFQKSLAQYDENTQKEIKDFSFSLLFDLYENEVKYTQELY--DTVGW 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI---------DLKKEKNFFET 111
           +    ++++ + AN+    +G E LF  T      +++V          D  +  +FF  
Sbjct: 251 S-EDVKKFLHYNANKALMNLGYEALFPDT------VTDVSAAILSALSPDANENHDFFSG 303

Query: 112 RVTEY--QQGAELKWD 125
             + Y   +    + D
Sbjct: 304 SGSSYIIGKAVSTEDD 319


>gi|119387083|ref|YP_918138.1| ribonucleotide-diphosphate reductase subunit beta [Paracoccus
           denitrificans PD1222]
 gi|119377678|gb|ABL72442.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Paracoccus denitrificans PD1222]
          Length = 329

 Score = 46.6 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 48/134 (35%), Gaps = 14/134 (10%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +             +  + +++ +   +E  Y  E      +GL
Sbjct: 200 IRDEAVHGYYIGYKYQRGLERLGEAERAALKDFAFSLIFDLYDIEAKYTAELY--DGIGL 257

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEY 116
                + ++ + AN+    +G E LF       NP   +   +    E  +FF    + Y
Sbjct: 258 T-EDVKSFLHYNANKALQNLGYEALFPPQACEVNPA--ILAALSPDSENHDFFSGSGSSY 314

Query: 117 QQGAEL-----KWD 125
             G  +      WD
Sbjct: 315 VIGKAVATEDEDWD 328


>gi|294853320|ref|ZP_06793992.1| ribonucleoside-diphosphate reductase [Brucella sp. NVSL 07-0026]
 gi|294818975|gb|EFG35975.1| ribonucleoside-diphosphate reductase [Brucella sp. NVSL 07-0026]
          Length = 329

 Score = 46.6 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 10/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E+ Y  E +  G  GL
Sbjct: 199 IRDEAVHGYYIGYKFQRALEVLFEEKRQEIKDFAFELLLELYDNEVRY-TEALYDGV-GL 256

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 257 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 313

Query: 116 YQQGAEL 122
           Y  G  +
Sbjct: 314 YVIGKAV 320


>gi|225870271|ref|YP_002746218.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus equi
           subsp. equi 4047]
 gi|225699675|emb|CAW93380.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus equi subsp. equi 4047]
          Length = 319

 Score = 46.6 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E      +  +     +L++    E  Y         VG 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELSESEQESLRDWMYDLLYQLYENEEQYTKTLY--DEVGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|258622932|ref|ZP_05717948.1| Ribonucleoside-diphosphate reductase subunit beta [Vibrio mimicus
           VM573]
 gi|258624605|ref|ZP_05719543.1| Ribonucleoside-diphosphate reductase subunit beta [Vibrio mimicus
           VM603]
 gi|262165762|ref|ZP_06033499.1| ribonucleotide reductase of class Ib (aerobic) beta subunit [Vibrio
           mimicus VM223]
 gi|262171415|ref|ZP_06039093.1| ribonucleotide reductase of class Ib (aerobic) beta subunit [Vibrio
           mimicus MB-451]
 gi|258583152|gb|EEW07963.1| Ribonucleoside-diphosphate reductase subunit beta [Vibrio mimicus
           VM603]
 gi|258584871|gb|EEW09604.1| Ribonucleoside-diphosphate reductase subunit beta [Vibrio mimicus
           VM573]
 gi|261892491|gb|EEY38477.1| ribonucleotide reductase of class Ib (aerobic) beta subunit [Vibrio
           mimicus MB-451]
 gi|262025478|gb|EEY44146.1| ribonucleotide reductase of class Ib (aerobic) beta subunit [Vibrio
           mimicus VM223]
          Length = 323

 Score = 46.6 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          +       + +  + ++L +    E +Y         VGL
Sbjct: 193 IRDEAVHGYYIGYKFQLAYRQLDEAQQAQIKDYAFSLLFDLYEAEASYTEFLY--DPVGL 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115
                + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 251 T-EEVKHFLHYNANKALMNLGFEPLFPEEVCEVNPAILAALSPNADENH--DFFSGSGSS 307

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 308 YVIGQAVATQDEDWD 322


>gi|322374376|ref|ZP_08048890.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           sp. C300]
 gi|321279876|gb|EFX56915.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           sp. C300]
          Length = 320

 Score = 46.6 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P     + ++    +L+     E  Y  E++  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQGKLKEWMYDLLYTLYENEEGY-TESLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|315223183|ref|ZP_07865044.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           anginosus F0211]
 gi|315187615|gb|EFU21369.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           anginosus F0211]
          Length = 319

 Score = 46.6 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    + F++    +L+     E  Y  ET+  G  G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQETFREWMYDLLYTLYENEEGY-TETLYDGV-GW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                + ++++ AN+    +G + LF  T    NP   M+ +       +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDSLFPDTADDVNPIV-MNGISTGTSNHDFF 295


>gi|225868773|ref|YP_002744721.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus equi
           subsp. zooepidemicus]
 gi|225702049|emb|CAW99658.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus equi subsp. zooepidemicus]
          Length = 319

 Score = 46.6 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E      +  +     +L++    E  Y         VG 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELSESEQESLRDWMYDLLYQLYENEEQYTKTLY--DEVGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|332523715|ref|ZP_08399967.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           porcinus str. Jelinkova 176]
 gi|332314979|gb|EGJ27964.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           porcinus str. Jelinkova 176]
          Length = 319

 Score = 46.2 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E      + F++    +L++    E +Y         VG 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELSEEEQESFREWMYDLLYQLYENEESYTKTLY--DQVGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 246 TDEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|296140644|ref|YP_003647887.1| ribonucleoside-diphosphate reductase [Tsukamurella paurometabola
           DSM 20162]
 gi|296028778|gb|ADG79548.1| Ribonucleoside-diphosphate reductase [Tsukamurella paurometabola
           DSM 20162]
          Length = 334

 Score = 46.2 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 50/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E  Y         VGL
Sbjct: 204 IRDEAVHGYYIGYKYQRGLETESPQRREELKDYTFDLLMELYANEEDYTESLY--DEVGL 261

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
           +    ++++++ AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 262 S-EDVKKFLRYNANKALMNLGYEALFPKDATDVNPAILSALSPNADENH--DFFSGSGSS 318

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 319 YVIGKAVNTEDEDWD 333


>gi|239833484|ref|ZP_04681812.1| ribonucleotide-diphosphate reductase subunit beta [Ochrobactrum
           intermedium LMG 3301]
 gi|239821547|gb|EEQ93116.1| ribonucleotide-diphosphate reductase subunit beta [Ochrobactrum
           intermedium LMG 3301]
          Length = 328

 Score = 46.2 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 10/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E+ Y  E +  G  GL
Sbjct: 198 IRDEAVHGYYIGYKFQRGLERLNGEQKQEIKDFAFELLLELYDNEVRY-TEALYDGV-GL 255

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 256 T-EDVKKFLHYNANKALMNLGYEALFPADACKVNPAILSALSPNADENH--DFFSGSGSS 312

Query: 116 YQQGAEL 122
           Y  G  +
Sbjct: 313 YVIGKAV 319


>gi|32453719|ref|NP_861928.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage
           RB69]
 gi|32350538|gb|AAP76137.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage
           RB69]
          Length = 390

 Score = 46.2 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 25/116 (21%)

Query: 2   RDESLHL--------NF-----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY 48
           RDE LHL        NF      +     +K  N    T  ++   +            +
Sbjct: 247 RDEQLHLRVLSTLSVNFNLVLMAMSGFKLLKNVNKKQLTFLWKLIVKY---------KEW 297

Query: 49  AHETMPKGF-VGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 101
           A      G   G+N  S   ++ ++   R  Q GL  P+    T++P+PW+ E ++
Sbjct: 298 AAHLFKDGTCPGINTQSMCAFVDYLTVSRMKQCGLPCPITDAPTKHPYPWIREYLN 353


>gi|312864696|ref|ZP_07724927.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           downei F0415]
 gi|311099823|gb|EFQ58036.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           downei F0415]
          Length = 319

 Score = 46.2 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E       EF+     +L++    E  Y         VG 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELSEEEQSEFRDWMYDLLYQLYENEELYTKTLY--DEVGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTADDVNPIV-MNGISTGTSNHDFF 295


>gi|212712928|ref|ZP_03321056.1| hypothetical protein PROVALCAL_04026 [Providencia alcalifaciens DSM
           30120]
 gi|212684406|gb|EEB43934.1| hypothetical protein PROVALCAL_04026 [Providencia alcalifaciens DSM
           30120]
          Length = 323

 Score = 46.2 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 14/133 (10%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +           E +  + ++L +    EI Y  E      VG 
Sbjct: 193 IRDEAIHGYYIGYKFQKALAHYSEQERNEIKDFTFSLLLDLYENEIKYTQELY--DGVGW 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
           +    + ++ + AN+    +G E LF  +      +S  I      D  +  +FF    +
Sbjct: 251 S-EDVKSFLHYNANKALMNLGYEALFPDS---ITQVSPEILSALSPDANENHDFFSGSGS 306

Query: 115 EYQ--QGAELKWD 125
            Y   +    + D
Sbjct: 307 SYVIGKAVSTEDD 319


>gi|325963521|ref|YP_004241427.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469608|gb|ADX73293.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 324

 Score = 46.2 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E+ Y H+      VGL
Sbjct: 194 IRDEAVHGYYIGYKFQRGLEAVSPERRQEIKDYTFELLFELYENEVQYTHDLY--DGVGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   ++++ + AN+    +G E +F  +    NP     +S   D     +FF    + 
Sbjct: 252 -AEDVKKFLHYNANKALMNLGYEAMFPASVTDVNPAILSALSPNADENH--DFFSGSGSS 308

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 309 YVIGKAVNTEDEDWD 323


>gi|313890786|ref|ZP_07824411.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313120887|gb|EFR44001.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 319

 Score = 46.2 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E      + F++    +L++    E  Y         VG 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELNEEEQESFREWMYDLLYQLYENEENYTKTLY--DQVGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 246 TDEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|227504013|ref|ZP_03934062.1| ribonucleoside-diphosphate reductase [Corynebacterium striatum ATCC
           6940]
 gi|227199407|gb|EEI79455.1| ribonucleoside-diphosphate reductase [Corynebacterium striatum ATCC
           6940]
          Length = 329

 Score = 46.2 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          E P    +E +  +  +L+E    EI Y  +      +G 
Sbjct: 199 IRDEAVHGYYIGYKFQNGYNELPAEKQEEIKGYTFDLLYELYDNEIDYTEDLY--DELGW 256

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+  + +G E LF   E   +P     +S   D     +FF    + 
Sbjct: 257 T-EDVKRFLRYNANKALNNLGFEGLFPADETRVSPAILSSLSPNADENH--DFFSGSGSS 313

Query: 116 YQQG-----AELKWD 125
           Y  G      +  WD
Sbjct: 314 YVIGKAEDTTDDDWD 328


>gi|312137650|ref|YP_004004986.1| ribonucleoside-diphosphate reductase beta subunit nrdf [Rhodococcus
           equi 103S]
 gi|311886989|emb|CBH46298.1| ribonucleoside-diphosphate reductase beta subunit NrdF [Rhodococcus
           equi 103S]
          Length = 322

 Score = 46.2 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 8/123 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +             ++ +  +L      E+AYA +      VG 
Sbjct: 192 IRDEAVHGYYIGYKCRKALERLDASARDAHRRYTYDLLETLYANEVAYAADLY--DEVGW 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEY 116
            A     YM+F AN+    +G EP+F  +E   NP   +S +     E  +FF    + Y
Sbjct: 250 TAEVVS-YMRFNANKALANLGYEPMFPVSECQVNPAI-LSALDPGAGENHDFFSGSGSAY 307

Query: 117 QQG 119
             G
Sbjct: 308 VIG 310


>gi|300780546|ref|ZP_07090401.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           genitalium ATCC 33030]
 gi|300533532|gb|EFK54592.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           genitalium ATCC 33030]
          Length = 333

 Score = 46.2 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 3/90 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          +       E ++ +  +L++    EI Y  +      +G 
Sbjct: 203 IRDEAVHGYYIGYKYQVGLRDESQQRQDELKEHAFDLLYDLYDNEIQYTEDLY--DPLGW 260

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90
                ++++++ AN+  + +G E LF   E
Sbjct: 261 T-EDVKRFLRYNANKALNNLGYEGLFPVDE 289


>gi|227488208|ref|ZP_03918524.1| ribonucleoside-diphosphate reductase [Corynebacterium
           glucuronolyticum ATCC 51867]
 gi|227091778|gb|EEI27090.1| ribonucleoside-diphosphate reductase [Corynebacterium
           glucuronolyticum ATCC 51867]
          Length = 335

 Score = 46.2 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 51/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +++         E +  +  +  +    E  Y  +      +G 
Sbjct: 205 IRDEAVHGYYIGYKYQRMQDNLSQAEKDELKDYTYDLTLDLYDNEEQYTEDMY--DELGW 262

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+  + +G E L+   E   +P     +S   D     +FF    + 
Sbjct: 263 T-EDVKRFLRYNANKALNNLGYEALYPSDETRVSPAILSALSPNADENH--DFFSGSGSS 319

Query: 116 YQQGAE-----LKWD 125
           Y  GA        WD
Sbjct: 320 YVIGAVENTEDADWD 334


>gi|265993236|ref|ZP_06105793.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis bv. 3 str. Ether]
 gi|262764106|gb|EEZ10138.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis bv. 3 str. Ether]
          Length = 189

 Score = 46.2 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 10/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E+ Y  E +  G  GL
Sbjct: 59  IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEALYDGV-GL 116

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 117 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 173

Query: 116 YQQGAEL 122
           Y  G  +
Sbjct: 174 YVIGKAV 180


>gi|227542806|ref|ZP_03972855.1| ribonucleoside-diphosphate reductase [Corynebacterium
           glucuronolyticum ATCC 51866]
 gi|227181432|gb|EEI62404.1| ribonucleoside-diphosphate reductase [Corynebacterium
           glucuronolyticum ATCC 51866]
          Length = 335

 Score = 46.2 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 51/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +++         E +  +  +  +    E  Y  +      +G 
Sbjct: 205 IRDEAVHGYYIGYKYQRMQDNLSQAEKDELKDYTYDLTLDLYDNEEQYTEDMY--DELGW 262

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+  + +G E L+   E   +P     +S   D     +FF    + 
Sbjct: 263 T-EDVKRFLRYNANKALNNLGYEALYPSDETRVSPAILSALSPNADENH--DFFSGSGSS 319

Query: 116 YQQGAE-----LKWD 125
           Y  GA        WD
Sbjct: 320 YVIGAVENTEDADWD 334


>gi|256111767|ref|ZP_05452742.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis bv. 3 str. Ether]
          Length = 190

 Score = 46.2 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 10/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E+ Y  E +  G  GL
Sbjct: 60  IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEALYDGV-GL 117

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 118 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 174

Query: 116 YQQGAEL 122
           Y  G  +
Sbjct: 175 YVIGKAV 181


>gi|163867489|ref|YP_001608688.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
           tribocorum CIP 105476]
 gi|161017135|emb|CAK00693.1| ribonucleoside-diphosphate reductase beta chain [Bartonella
           tribocorum CIP 105476]
          Length = 324

 Score = 46.2 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 47/132 (35%), Gaps = 12/132 (9%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          +      +E +  +  +L +   +E  Y  +      +GL
Sbjct: 194 IRDEAVHGYYIGYKFQLGYAKLEEAKRQEVKDFAFNLLFDLYNIECKYTEDLY--DSLGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115
                + ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKIFLHYNANKALMNLGFEALFPPEVCHVNPAILASLSPNSDENH--DFFSGAGSS 308

Query: 116 YQ--QGAELKWD 125
           Y   +      D
Sbjct: 309 YVIGKAVATTDD 320


>gi|296455120|ref|YP_003662264.1| ribonucleoside-diphosphate reductase [Bifidobacterium longum subsp.
           longum JDM301]
 gi|296184552|gb|ADH01434.1| Ribonucleoside-diphosphate reductase [Bifidobacterium longum subsp.
           longum JDM301]
          Length = 330

 Score = 46.2 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 10/130 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +       + Q  +  +L+E    E+ Y      +  VGL
Sbjct: 200 IRDEAVHGYYIGYKYQKGIAQLSDAERLDLQDYTYDLLNELYDNEVEYTQSLYDR--VGL 257

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115
                E+++++  N+    +G   LF       NP     +S   D     +FF    + 
Sbjct: 258 T-DDVEKFLRYNGNKALMNLGYPALFPAEICDVNPAILASLSPNADENH--DFFSGSGSS 314

Query: 116 YQQGAELKWD 125
           Y  G   + D
Sbjct: 315 YVMGKAEETD 324


>gi|195977892|ref|YP_002123136.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           equi subsp. zooepidemicus MGCS10565]
 gi|195974597|gb|ACG62123.1| ribonucleotide reductase of class Ib (aerobic) beta subunit NrdF
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
          Length = 319

 Score = 45.8 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E      +  +     +L++    E  Y         VG 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELSDSEQESLRDWMYDLLYQLYENEEQYTKTLY--DEVGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|300932708|ref|ZP_07147964.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           resistens DSM 45100]
          Length = 331

 Score = 45.8 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 38/90 (42%), Gaps = 3/90 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +      +   +      +E +  +  +L E    E  Y  +      +G 
Sbjct: 201 IRDESVHGYYIGYKYQRAMEQESAARQEELKDHTFDLLLELYDNEAQYTEDLY--DELGW 258

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90
                ++++++ AN+  + +G E LF   E
Sbjct: 259 T-EDVKRFLRYNANKALNNLGYEGLFPADE 287


>gi|227502986|ref|ZP_03933035.1| ribonucleoside-diphosphate reductase [Corynebacterium accolens ATCC
           49725]
 gi|306836783|ref|ZP_07469743.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           accolens ATCC 49726]
 gi|227076047|gb|EEI14010.1| ribonucleoside-diphosphate reductase [Corynebacterium accolens ATCC
           49725]
 gi|304567329|gb|EFM42934.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           accolens ATCC 49726]
          Length = 329

 Score = 45.8 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 52/135 (38%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      Q   +      +E +  +  +  E    EI Y  +      +G 
Sbjct: 199 IRDEAVHGYYIGYKFQQEYKKLDEKRQEELKDYTFDLAFELYDNEIDYTEDLY--DELGW 256

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+  + +G E LF   E   +P     +S   D     +FF    + 
Sbjct: 257 T-EDVKRFLRYNANKALNNLGFEGLFPADETRVSPAILSSLSPNADENH--DFFSGSGSS 313

Query: 116 YQQG-----AELKWD 125
           Y  G      +  WD
Sbjct: 314 YVIGKAEDTTDDDWD 328


>gi|222081801|ref|YP_002541166.1| ribonucleotide-diphosphate reductase subunit beta [Agrobacterium
           radiobacter K84]
 gi|221726480|gb|ACM29569.1| ribonucleoside-diphosphate reductase [Agrobacterium radiobacter
           K84]
          Length = 329

 Score = 45.8 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 48/127 (37%), Gaps = 10/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E  Y  E +  G  GL
Sbjct: 199 IRDEAVHGYYIGYKFQRGLERLSEEGRQEIKDFAFDLLLELYDNEAKY-TEALYDGV-GL 256

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 257 T-EDVKKFLHYNANKALMNLGYEALFPPEACKVNPAILSALSPNADENH--DFFSGSGSS 313

Query: 116 YQQGAEL 122
           Y  G  +
Sbjct: 314 YVIGKAV 320


>gi|311113720|ref|YP_003984942.1| ribonucleotide-diphosphate reductase subunit beta [Rothia
           dentocariosa ATCC 17931]
 gi|310945214|gb|ADP41508.1| ribonucleotide-diphosphate reductase subunit beta [Rothia
           dentocariosa ATCC 17931]
          Length = 325

 Score = 45.8 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 57/133 (42%), Gaps = 11/133 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +       E ++ +  +L+E    E++Y H ++  G  G 
Sbjct: 195 IRDEAVHGYYIGYKFQRGLAKESPERQAELKEYTFNLLYELYENEVSYTH-SLYDGV-GW 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKN--FFETRVTEYQ 117
           +    ++++ + AN+    +G E +F  +  N  P +   +    ++N  FF    + Y 
Sbjct: 253 S-EDVKKFLHYNANKALMNLGYEAMFPASVTNVSPAILSALSPNADENHDFFSGSGSSYV 311

Query: 118 QGAEL-----KWD 125
            G  +      WD
Sbjct: 312 IGKAVNTEDEDWD 324


>gi|38234435|ref|NP_940202.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           diphtheriae NCTC 13129]
 gi|38200698|emb|CAE50394.1| ribonucleotide reductase beta-chain 1 [Corynebacterium diphtheriae]
          Length = 328

 Score = 45.8 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 42/91 (46%), Gaps = 5/91 (5%)

Query: 1   MRDESLHLNFGIDVINQ-IKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
           +RDE++H  +      Q ++ E P     E +  +  +L++    EI Y  +      +G
Sbjct: 198 IRDEAVHGYYIGYKFQQALRKETPE-RQAELKGYTFDLLYDLYDNEIQYTEDLYDD--LG 254

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90
                 ++++++ AN+  + +G E LF   E
Sbjct: 255 WT-EDVKRFLRYNANKALNNLGYEALFPADE 284


>gi|116493227|ref|YP_804962.1| ribonucleotide-diphosphate reductase subunit beta [Pediococcus
           pentosaceus ATCC 25745]
 gi|116103377|gb|ABJ68520.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Pediococcus pentosaceus ATCC 25745]
          Length = 317

 Score = 45.8 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E      +E +      L++    E  Y H       VG 
Sbjct: 188 LRDESVHGTYIGYKFQLGLKELGENEQQEIKDWMYNFLYDLYDNEEKYVHTLY--DQVGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  + ++ AN+    +G +PLF  TE   NP   M+ +       +FF
Sbjct: 246 T-DEVLTFTRYNANKALMNLGQDPLFPDTEADVNPIV-MNGISTGTSNHDFF 295


>gi|86359305|ref|YP_471197.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium etli
           CFN 42]
 gi|86283407|gb|ABC92470.1| ribonucleoside-diphosphate reductase, beta subunit protein
           [Rhizobium etli CFN 42]
          Length = 324

 Score = 45.8 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E  Y  E +  G  GL
Sbjct: 194 IRDEAVHGYYIGYKFQRGLETLSEERRQEIKYFAFDLLLELYDNEAKY-TEALYDGV-GL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
           +    ++++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 252 S-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 308

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 309 YVIGKAVATEDEDWD 323


>gi|295397900|ref|ZP_06807962.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus
           viridans ATCC 11563]
 gi|294973880|gb|EFG49645.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus
           viridans ATCC 11563]
          Length = 323

 Score = 45.8 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 47/115 (40%), Gaps = 13/115 (11%)

Query: 1   MRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
           +RDES+H  +         NQ+  E      ++ Q  + ++L E    E  Y+       
Sbjct: 192 LRDESVHGTYIGYKFQIAFNQLSKEE----QEDMQNWAFSLLFELYENEAKYSEYIYDD- 246

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVIDLKKEKNFF 109
            +G      + ++++ AN+    +G +PLF  T +      M+ +       +FF
Sbjct: 247 -LGWT-EDVKIFLRYNANKALQNLGFDPLFPDTADDVDPIVMNGISTGTSNHDFF 299


>gi|213693323|ref|YP_002323909.1| Ribonucleoside-diphosphate reductase [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|213524784|gb|ACJ53531.1| Ribonucleoside-diphosphate reductase [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320459505|dbj|BAJ70126.1| ribonucleotide-diphosphate reductase beta subunit [Bifidobacterium
           longum subsp. infantis ATCC 15697]
          Length = 330

 Score = 45.8 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 10/130 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +       + Q  +  +L+E    E+ Y      +  VGL
Sbjct: 200 IRDEAVHGYYIGYKYQKGIAQLGDAERLDLQDYTYDLLNELYDNEVEYTQSLYDR--VGL 257

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115
                E+++++  N+    +G   LF       NP     +S   D     +FF    + 
Sbjct: 258 T-DDVEKFLRYNGNKALMNLGYPALFPAEICDVNPAILASLSPNADENH--DFFSGSGSS 314

Query: 116 YQQGAELKWD 125
           Y  G   + D
Sbjct: 315 YVMGKAEETD 324


>gi|153010278|ref|YP_001371492.1| ribonucleotide-diphosphate reductase subunit beta [Ochrobactrum
           anthropi ATCC 49188]
 gi|151562166|gb|ABS15663.1| Ribonucleoside-diphosphate reductase [Ochrobactrum anthropi ATCC
           49188]
          Length = 328

 Score = 45.8 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 10/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +  +  +  +L E    E+ Y  E +  G  GL
Sbjct: 198 IRDEAVHGYYIGYKFQRGLERLNEEQKQAIKDFAFELLLELYDNEVRY-TEALYDGV-GL 255

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 256 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--DFFSGSGSS 312

Query: 116 YQQGAEL 122
           Y  G  +
Sbjct: 313 YVIGKAV 319


>gi|319441868|ref|ZP_07991024.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           variabile DSM 44702]
          Length = 332

 Score = 45.8 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 37/90 (41%), Gaps = 3/90 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  ++ +    E  Y  +      +G 
Sbjct: 202 IRDEAVHGYYIGYKYQRALEHETEARRQELKDHTFELVFDLYDNECQYTEDLYDD--LGW 259

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90
                ++++++ AN+  + +G E LF   E
Sbjct: 260 T-EDVKRFLRYNANKALNNLGYEGLFPVDE 288


>gi|270291189|ref|ZP_06197412.1| ribonucleoside-diphosphate reductase, beta subunit [Pediococcus
           acidilactici 7_4]
 gi|304385474|ref|ZP_07367819.1| ribonucleotide-diphosphate reductase subunit beta [Pediococcus
           acidilactici DSM 20284]
 gi|270280585|gb|EFA26420.1| ribonucleoside-diphosphate reductase, beta subunit [Pediococcus
           acidilactici 7_4]
 gi|304328681|gb|EFL95902.1| ribonucleotide-diphosphate reductase subunit beta [Pediococcus
           acidilactici DSM 20284]
          Length = 317

 Score = 45.8 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          +      +E +      L++    E  Y H+      VG 
Sbjct: 188 LRDESVHGTYIGYKFQLGMKDLGENEQQELKDWMYNFLYDLYANEEKYVHKVY--DQVGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  + ++ AN+    +G +PLF  TE   NP   M+ +       +FF
Sbjct: 246 T-EEVLTFTRYNANKALMNLGQDPLFPDTEADVNPIV-MNGISTGTSNHDFF 295


>gi|86156146|gb|ABC86791.1| ribonucleotide reductase beta subunit [Borrelia turicatae]
          Length = 321

 Score = 45.8 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 17/126 (13%)

Query: 1   MRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
           +RDES+H  F      +  N++         KE    +  +L     LE AY  +     
Sbjct: 192 LRDESVHGVFVGLLAQEEFNKMTSREQEFAYKE----AMFILDRLYDLEKAYTKDLYSS- 246

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETR 112
            +GL +   + ++++ A++    +G EP F   +   NP   +   +    +  +FF T+
Sbjct: 247 -IGLESA-VDVFVRYNADKALMNLGFEPTFNIQDIDVNPL--VLNGLRTDTKTHDFFSTK 302

Query: 113 VTEYQQ 118
              Y +
Sbjct: 303 GNGYIK 308


>gi|326381484|ref|ZP_08203178.1| Ribonucleoside-diphosphate reductase [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326199731|gb|EGD56911.1| Ribonucleoside-diphosphate reductase [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 333

 Score = 45.4 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 56/136 (41%), Gaps = 17/136 (12%)

Query: 1   MRDESLHLNFGIDVI-NQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
           +RDE++H  +        ++++ P    +E +  +  +L E    E  Y  E +     G
Sbjct: 203 IRDEAVHGYYIGYKYQRGLEVQTPERR-QELKDYTFELLFELYDNETDY-TEALYDEV-G 259

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVT 114
           L+    ++++++ AN+    +G E +F   E   NP     +S   D     +FF    +
Sbjct: 260 LS-EDVKKFLRYNANKALMNLGYEAMFPKDETDVNPAILSALSPNADENH--DFFSGSGS 316

Query: 115 EYQQGAEL-----KWD 125
            Y  G  +      WD
Sbjct: 317 SYVIGKAVNTEDEDWD 332


>gi|260579705|ref|ZP_05847564.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Corynebacterium jeikeium ATCC 43734]
 gi|258602135|gb|EEW15453.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Corynebacterium jeikeium ATCC 43734]
          Length = 331

 Score = 45.4 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 5/91 (5%)

Query: 1   MRDESLHLNFGIDVI-NQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
           +RDES+H  +        ++ E P    +E ++ +  +L E    E  Y  +      +G
Sbjct: 201 IRDESVHGYYIGYKYQRALENETPE-RQEELKEHTFDLLLELYDNEAQYTEDLY--DELG 257

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90
                 ++++++ AN+  + +G E LF   E
Sbjct: 258 WT-EDVKRFLRYNANKALNNLGYEGLFPADE 287


>gi|23465253|ref|NP_695856.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           longum NCC2705]
 gi|23325884|gb|AAN24492.1| ribonucleoside-diphosphate reductase 2 beta chain [Bifidobacterium
           longum NCC2705]
          Length = 330

 Score = 45.4 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 10/130 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +       + Q  +  +L+E    E+ Y         VGL
Sbjct: 200 IRDEAVHGYYIGYKYQKGIAQLSDAERLDLQDYTYDLLNELYDNEVEYTQSLYDC--VGL 257

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115
                E+++++  N+    +G   LF       NP     +S   D     +FF    + 
Sbjct: 258 T-DDVEKFLRYNGNKALMNLGYPALFPAEICDVNPAILAALSPNADENH--DFFSGSGSS 314

Query: 116 YQQGAELKWD 125
           Y  G   + D
Sbjct: 315 YVMGKAEETD 324


>gi|269217712|ref|ZP_06161566.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
           oral taxon 848 str. F0332]
 gi|269212647|gb|EEZ78987.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
           oral taxon 848 str. F0332]
          Length = 325

 Score = 45.4 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 50/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +       E Q+ + +++ +    E  Y         +GL
Sbjct: 195 IRDEAVHGYYIGYKYQKALAKASQERRDELQEYAYSLVMDLYDNEELYTESLY--DEMGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                + +++  AN+  + +G E LF   +   NP     +S   D     +FF    + 
Sbjct: 253 T-EDVKMFLRHNANKALNNLGYEALFGPDQTAVNPSILAALSPNADENH--DFFSGSGSS 309

Query: 116 YQQGAEL-----KWD 125
           Y  G         WD
Sbjct: 310 YVIGTAEATTDDDWD 324


>gi|68535550|ref|YP_250255.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           jeikeium K411]
 gi|68263149|emb|CAI36637.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           jeikeium K411]
          Length = 331

 Score = 45.4 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 5/91 (5%)

Query: 1   MRDESLHLNFGIDVI-NQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
           +RDES+H  +        ++ E P    +E ++ +  +L E    E  Y  +      +G
Sbjct: 201 IRDESVHGYYIGYKYQRALENETPE-RQEELKEHTFDLLLELYDNEAQYTEDLY--DELG 257

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90
                 ++++++ AN+  + +G E LF   E
Sbjct: 258 WT-EDVKRFLRYNANKALNNLGYEGLFPADE 287


>gi|218690804|ref|YP_002399016.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           ED1a]
 gi|218428368|emb|CAR09297.2| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli ED1a]
          Length = 319

 Score = 45.4 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 50/126 (39%), Gaps = 6/126 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQARREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
            +   + ++ + AN+    +G EPLF       NP  + +   +  +  +FF    + Y 
Sbjct: 247 -SDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAIFAALSPNADENHDFFSGSGSSYV 305

Query: 118 QGAELK 123
            G  ++
Sbjct: 306 MGKAVE 311


>gi|261343568|ref|ZP_05971213.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rustigianii DSM 4541]
 gi|282568717|gb|EFB74252.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rustigianii DSM 4541]
          Length = 323

 Score = 45.4 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 14/133 (10%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +           E ++ + ++L +    EI Y  E      VG 
Sbjct: 193 IRDEAIHGYYIGYKFQKSLATYNEQQQNEIKEFTFSLLFDLYENEIKYTQELY--DSVGW 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
           +    + ++ + AN+    +G E LF         +S  I      D  +  +FF    +
Sbjct: 251 S-EDVKSFLHYNANKALMNLGYEALFPEA---ITQVSPEILSALSPDANENHDFFSGSGS 306

Query: 115 EYQ--QGAELKWD 125
            Y   +    + D
Sbjct: 307 SYVIGKAVSTEDD 319


>gi|315658919|ref|ZP_07911786.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           lugdunensis M23590]
 gi|315496043|gb|EFU84371.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           lugdunensis M23590]
          Length = 322

 Score = 45.4 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 7/109 (6%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DES+H  F       ++ E      ++  ++   +L +    E++Y H       +GL  
Sbjct: 194 DESIHGVFTGIDAQSLRNELSENEKQQADKEMYVLLEDLYSNEVSYTHMLYDD--IGLT- 250

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109
                Y+++  N+    +G +P F+  + NP   +   +D   +  +FF
Sbjct: 251 EDVLNYVKYNGNKALSNLGFDPYFEEKDFNPI--IENALDTTTKNHDFF 297


>gi|289551411|ref|YP_003472315.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
           [Staphylococcus lugdunensis HKU09-01]
 gi|289180942|gb|ADC88187.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
           [Staphylococcus lugdunensis HKU09-01]
          Length = 322

 Score = 45.4 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 7/109 (6%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DES+H  F       ++ E      ++  ++   +L +    E++Y H       +GL  
Sbjct: 194 DESIHGVFTGIDAQSLRNELSENEKQQADKEMYVLLEDLYSNEVSYTHMLYDD--IGLT- 250

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109
                Y+++  N+    +G +P F+  + NP   +   +D   +  +FF
Sbjct: 251 EDVLNYVKYNGNKALSNLGFDPYFEEKDFNPI--IENALDTTTKNHDFF 297


>gi|262203177|ref|YP_003274385.1| ribonucleoside-diphosphate reductase [Gordonia bronchialis DSM
           43247]
 gi|262086524|gb|ACY22492.1| Ribonucleoside-diphosphate reductase [Gordonia bronchialis DSM
           43247]
          Length = 334

 Score = 45.4 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E  Y  E +     GL
Sbjct: 204 IRDEAVHGYYIGYKYQRGLEVQTAERRQELKDYTFELLFELYDNESDY-TEALYDEV-GL 261

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E +F   E   NP     +S   D     +FF    + 
Sbjct: 262 T-EDVKKFLRYNANKALMNLGYEAMFPKDETDVNPAILSALSPNADENH--DFFSGSGSS 318

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 319 YVIGKAVNTEDEDWD 333


>gi|322692090|ref|YP_004221660.1| ribonucleotide-diphosphate reductase beta subunit [Bifidobacterium
           longum subsp. longum JCM 1217]
 gi|320456946|dbj|BAJ67568.1| ribonucleotide-diphosphate reductase beta subunit [Bifidobacterium
           longum subsp. longum JCM 1217]
          Length = 330

 Score = 45.0 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 10/130 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +       + Q  +  +L+E    E+ Y      +  VGL
Sbjct: 200 IRDEAVHGYYIGYKYQKGIAQLSDAERLDLQDYTYDLLNELYDNEVEYTQSLYDR--VGL 257

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115
                E+++++  N+    +G   LF       NP     +S   D     +FF    + 
Sbjct: 258 T-DDVEKFLRYNGNKALMNLGYPALFPAEICDVNPAILAALSPNADENH--DFFSGSGSS 314

Query: 116 YQQGAELKWD 125
           Y  G   + D
Sbjct: 315 YVMGKAEETD 324


>gi|222150734|ref|YP_002559887.1| ribonucleoside-diphosphate reductase minor subunit [Macrococcus
           caseolyticus JCSC5402]
 gi|222119856|dbj|BAH17191.1| ribonucleoside-diphosphate reductase minor subunit [Macrococcus
           caseolyticus JCSC5402]
          Length = 322

 Score = 45.0 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 15/113 (13%)

Query: 3   DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
           DES+H  F       + N++  +      KE       +L E    E +Y      +  V
Sbjct: 194 DESIHGVFTGLDAQSLRNEMTEDEKIRADKEM----YDLLKELYANEESYTKMLYDR--V 247

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFF 109
           GL       Y+Q+  N+    +G EP F+    NP   +   ++   +  +FF
Sbjct: 248 GLT-EDVLNYVQYNGNKALANLGFEPYFEEKGFNPI--IENALNTSTKNHDFF 297


>gi|227833759|ref|YP_002835466.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           aurimucosum ATCC 700975]
 gi|262184833|ref|ZP_06044254.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227454775|gb|ACP33528.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 328

 Score = 45.0 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 44/126 (34%), Gaps = 10/126 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      Q           E Q K   +L +    E  Y  +      +G 
Sbjct: 198 IRDEAVHGYYIGYKYQQQVKHLDQAQQAELQSKVIDLLLDLMDNEEHYTRDLY--DPLGW 255

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                  ++++ AN+  + +G + ++       NP     ++   D     +FF    + 
Sbjct: 256 T-EDVLAFLRYNANKALNNLGYDGIYPQDMCRFNPGVMTSLNPGADENH--DFFSGSGSS 312

Query: 116 YQQGAE 121
           Y  G  
Sbjct: 313 YVIGTA 318


>gi|325977861|ref|YP_004287577.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|325177789|emb|CBZ47833.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 320

 Score = 45.0 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E        F++    +L++    E  Y   ++  G  G 
Sbjct: 189 IRDESVHGTYIGYKFQLGFNELSEEEQDNFREWMYDLLYQLYENEENYTK-SLYDGV-GW 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 247 T-DEVLTFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 296


>gi|239622882|ref|ZP_04665913.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Bifidobacterium longum subsp. infantis CCUG 52486]
 gi|312133660|ref|YP_004000999.1| nrdf [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482331|ref|ZP_07941351.1| ribonucleotide reductase [Bifidobacterium sp. 12_1_47BFAA]
 gi|322690138|ref|YP_004209872.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           longum subsp. infantis 157F]
 gi|239514879|gb|EEQ54746.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Bifidobacterium longum subsp. infantis CCUG 52486]
 gi|291517762|emb|CBK71378.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Bifidobacterium longum subsp. longum F8]
 gi|311772922|gb|ADQ02410.1| NrdF [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916211|gb|EFV37613.1| ribonucleotide reductase [Bifidobacterium sp. 12_1_47BFAA]
 gi|320461474|dbj|BAJ72094.1| ribonucleotide-diphosphate reductase beta subunit [Bifidobacterium
           longum subsp. infantis 157F]
          Length = 330

 Score = 45.0 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 10/130 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +       + Q  +  +L+E    E+ Y      +  VGL
Sbjct: 200 IRDEAVHGYYIGYKYQKGIAQLSDAERLDLQDYTYDLLNELYDNEVEYTQSLYDR--VGL 257

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115
                E+++++  N+    +G   LF       NP     +S   D     +FF    + 
Sbjct: 258 T-DDVEKFLRYNGNKALMNLGYPALFPAEICDVNPAILAALSPNADENH--DFFSGSGSS 314

Query: 116 YQQGAELKWD 125
           Y  G   + D
Sbjct: 315 YVMGKAEETD 324


>gi|238750475|ref|ZP_04611976.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia rohdei
           ATCC 43380]
 gi|238711406|gb|EEQ03623.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia rohdei
           ATCC 43380]
          Length = 323

 Score = 45.0 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 52/135 (38%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +  +   +E +  +  +L +    E+ Y  +   K  VG 
Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKVDNNRRQEIKNFAFDLLQDLYDNEVRYTEDLYDK--VGW 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                + ++ + AN+    +G E LF   +   NP     +S   D     +FF    + 
Sbjct: 251 T-EDVKSFLHYNANKALMNLGYEALFPANQAEVNPAILAALSPNADENH--DFFSGSGSS 307

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 308 YVIGKAVITEDEDWD 322


>gi|295398337|ref|ZP_06808379.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus
           viridans ATCC 11563]
 gi|294973476|gb|EFG49261.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus
           viridans ATCC 11563]
          Length = 317

 Score = 45.0 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 3/89 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +      Q   E      + F Q   + L E    E A+  E   +  +GL
Sbjct: 186 IRDESVHGTYLGYKFRQDFEELTQDEQEAFTQWMYSFLEELLEKEFAFTEELYTE--IGL 243

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT 89
            A   + ++++ AN+    +G    F+  
Sbjct: 244 -AEDIKTFVKYNANKSLQNMGFGIYFENA 271


>gi|25028975|ref|NP_739029.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           efficiens YS-314]
 gi|259508040|ref|ZP_05750940.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Corynebacterium efficiens YS-314]
 gi|23494262|dbj|BAC19229.1| ribonucleotide reductase beta chain [Corynebacterium efficiens
           YS-314]
 gi|259164381|gb|EEW48935.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Corynebacterium efficiens YS-314]
          Length = 334

 Score = 45.0 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 39/90 (43%), Gaps = 3/90 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E ++ +  +L++    E  Y  +      +G 
Sbjct: 204 IRDEAVHGYYVGYKYQKALARESAQRQEELKEYAFDLLYDLYENETQYTEDLY--DELGW 261

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90
                ++++++ AN+  + +G E LF   E
Sbjct: 262 T-EDVKRFLRYNANKAMNNLGYEGLFPADE 290


>gi|227547058|ref|ZP_03977107.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           longum subsp. infantis ATCC 55813]
 gi|227212475|gb|EEI80364.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           longum subsp. infantis ATCC 55813]
          Length = 330

 Score = 45.0 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 10/130 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +       + Q  +  +L+E    E+ Y      +  VGL
Sbjct: 200 IRDEAVHGYYIGYKYQKGIAQLSDAERLDLQDYTYDLLNELYDNEVEYTQSLYDR--VGL 257

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115
                E+++++  N+    +G   LF       NP     +S   D     +FF    + 
Sbjct: 258 T-DDVEKFLRYNGNKALMNLGYPALFPAEICDVNPAILAALSPNADENH--DFFSGSGSS 314

Query: 116 YQQGAELKWD 125
           Y  G   + D
Sbjct: 315 YVMGKAEETD 324


>gi|221309908|ref|ZP_03591755.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221314231|ref|ZP_03596036.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. NCIB 3610]
 gi|221319154|ref|ZP_03600448.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. JH642]
 gi|221323427|ref|ZP_03604721.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. SMY]
          Length = 123

 Score = 45.0 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 7/96 (7%)

Query: 28  KEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK 87
           KE    +  +L E    E+ Y  +      VGL AP  ++++++ AN+  + +G +  F+
Sbjct: 16  KELYAWALNLLQELYENELEYTEDVY--DQVGL-APDVKKFIRYNANKALNNLGFDHWFE 72

Query: 88  YTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQGAE 121
             + NP   +   ++ K +  +FF T+   Y++   
Sbjct: 73  EEDVNPI--VINGLNTKTKSHDFFSTKGNGYKKATV 106


>gi|306833073|ref|ZP_07466204.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           bovis ATCC 700338]
 gi|304424782|gb|EFM27917.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           bovis ATCC 700338]
          Length = 320

 Score = 45.0 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E        F++    +L++    E  Y   ++  G  G 
Sbjct: 189 IRDESVHGTYIGYKFQLGFNELSEEEQDNFREWMYDLLYQLYENEENYTK-SLYDGV-GW 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 247 T-DEVLTFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 296


>gi|13274105|emb|CAC33823.1| ribonucleotide reductase beta-subunit [Corynebacterium glutamicum]
          Length = 201

 Score = 45.0 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 53/132 (40%), Gaps = 12/132 (9%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E ++ +  +L++    E  Y+ +      +G 
Sbjct: 71  IRDEAVHGYYIGYKYQKAVAKETPERQEELKEYTFDLLYDLYDNETQYSEDLYDD--LGW 128

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----NPFPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+  + +G E LF   E     N    +S   D     +FF    + 
Sbjct: 129 T-EDVKRFLRYNANKALNNLGYEGLFPADETKVSPNILSALSPNADENH--DFFSGSGSS 185

Query: 116 YQ--QGAELKWD 125
           Y   +    + D
Sbjct: 186 YVIGKAENTEDD 197


>gi|288904913|ref|YP_003430135.1| ribonucleoside-diphosphate reductase (minor subunit) [Streptococcus
           gallolyticus UCN34]
 gi|306830970|ref|ZP_07464132.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
 gi|288731639|emb|CBI13196.1| ribonucleoside-diphosphate reductase (minor subunit) [Streptococcus
           gallolyticus UCN34]
 gi|304426993|gb|EFM30103.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
          Length = 320

 Score = 45.0 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E        F++    +L++    E  Y   ++  G  G 
Sbjct: 189 IRDESVHGTYIGYKFQLGFNELSEEEQDNFREWMYDLLYQLYENEENYTK-SLYDGV-GW 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 247 T-DEVLTFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 296


>gi|32709417|gb|AAP86727.1| NrdB [Enterobacteria phage LZ2]
          Length = 313

 Score = 45.0 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 5/65 (7%)

Query: 2   RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE LHL     +I Q+++    +      +E +Q++  +  E    E  +A      G 
Sbjct: 249 RDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQEKDWAVHLFKDGD 308

Query: 57  FVGLN 61
             GLN
Sbjct: 309 VPGLN 313


>gi|254819781|ref|ZP_05224782.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           intracellulare ATCC 13950]
          Length = 322

 Score = 45.0 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 21/138 (15%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKE---FQQKSRTMLHEATLLEIAYAHETMPKGF 57
           +RDE++H   G  +  + +     L   E    ++ +  +L+     EI YAH+      
Sbjct: 192 IRDEAVH---GFYIGYKCQRGLAELSEPERSGHREYTYELLNALYTNEIDYAHDLY--DG 246

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVID--LKKEKNFFETR 112
           +G        YM+F ANR    +G EP+F  ++   NP   +   +D    +  +FF   
Sbjct: 247 LGWT-DDVLPYMRFNANRALANLGYEPMFGPSDCRVNPA--VLSALDPGAGENHDFFSGS 303

Query: 113 VTEYQQGA-----ELKWD 125
            + Y  G+     +  WD
Sbjct: 304 GSSYVIGSHQATEDADWD 321


>gi|90962208|ref|YP_536124.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           salivarius UCC118]
 gi|301300452|ref|ZP_07206652.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           salivarius ACS-116-V-Col5a]
 gi|90821402|gb|ABE00041.1| Ribonucleoside-diphosphate reductase beta chain [Lactobacillus
           salivarius UCC118]
 gi|300214875|gb|ADJ79291.1| Ribonucleoside-diphosphate reductase beta chain [Lactobacillus
           salivarius CECT 5713]
 gi|300851949|gb|EFK79633.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           salivarius ACS-116-V-Col5a]
          Length = 326

 Score = 45.0 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 6/112 (5%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E      +EF      +L+E    E  Y H    K  VG 
Sbjct: 188 LRDESVHGTYIGYKFQLGFNELSDDEQEEFTSWMYDLLYELYENEEKYTHLLYDK--VGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEK-NFF 109
                  ++++ AN+    +G++PLF   Y +N  P +   I       +FF
Sbjct: 246 T-DDVLVFLRYNANKALMNLGMDPLFADGYAQNVNPVVMNGISTSTSNHDFF 296


>gi|227833933|ref|YP_002835640.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           aurimucosum ATCC 700975]
 gi|262184936|ref|ZP_06044357.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227454949|gb|ACP33702.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 329

 Score = 45.0 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 53/132 (40%), Gaps = 12/132 (9%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      Q   +      +E +  +  +L++    EI Y  +      +G 
Sbjct: 199 IRDEAVHGYYIGYKFQQGYQKLSEPEQEEMKGYAFDLLYDLYENEIDYTEDLY--DELGW 256

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+  + +G E LF   E   +P     +S   D     +FF    + 
Sbjct: 257 T-EDVKRFLRYNANKALNNLGFEGLFPADETRVSPAILSSLSPNADENH--DFFSGSGSS 313

Query: 116 YQ--QGAELKWD 125
           Y   +  E   D
Sbjct: 314 YVIGKAEETTDD 325


>gi|171779596|ref|ZP_02920552.1| hypothetical protein STRINF_01433 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281698|gb|EDT47132.1| hypothetical protein STRINF_01433 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 144

 Score = 45.0 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E       + +     +L++    E  Y         VG 
Sbjct: 12  IRDESVHGTYIGYKFQLGFNELSEKEQDDLRDWMYDLLYQLYENEENYTKTLY--DQVGW 69

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 70  T-EEVLTFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 119


>gi|227891214|ref|ZP_04009019.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           salivarius ATCC 11741]
 gi|227867088|gb|EEJ74509.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           salivarius ATCC 11741]
          Length = 326

 Score = 44.6 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 6/112 (5%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E      +EF      +L+E    E  Y H    K  VG 
Sbjct: 188 LRDESVHGTYIGYKFQLGFNELSDDEQEEFTSWMYDLLYELYENEEKYTHLLYDK--VGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEK-NFF 109
                  ++++ AN+    +G++PLF   Y +N  P +   I       +FF
Sbjct: 246 T-DDVLVFLRYNANKALMNLGMDPLFADGYAQNVNPVVMNGISTSTSNHDFF 296


>gi|238762669|ref|ZP_04623638.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           kristensenii ATCC 33638]
 gi|238698974|gb|EEP91722.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           kristensenii ATCC 33638]
          Length = 323

 Score = 44.6 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L +    E+ Y  +      VG 
Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKVDISRRQEIKNFAYNLLQDLYDNEVRYTADLY--DGVGW 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF   +   NP     +S   D     +FF    + 
Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPADQANVNPAILAALSPNADENH--DFFSGSGSS 307

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 308 YVIGKAVNTEDEDWD 322


>gi|315654326|ref|ZP_07907234.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii ATCC 51333]
 gi|315657771|ref|ZP_07910651.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii subsp. holmesii ATCC 35242]
 gi|315491361|gb|EFU80978.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii ATCC 51333]
 gi|315491568|gb|EFU81179.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii subsp. holmesii ATCC 35242]
          Length = 322

 Score = 44.6 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 49/126 (38%), Gaps = 10/126 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          E+     +E +  + ++L +    E  Y         +GL
Sbjct: 192 IRDEAVHGYYIGYKYQLAMRESSESRRQEMKDYTFSLLMDLYDNEELYTETLY--DPLGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   +   NP     +S   D     +FF    + 
Sbjct: 250 T-EDVKKFLKYNANKALMNLGYEALFTADQVNVNPAILAALSPAADENH--DFFSGSGSS 306

Query: 116 YQQGAE 121
           Y  G  
Sbjct: 307 YAIGTA 312


>gi|298345735|ref|YP_003718422.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii ATCC 43063]
 gi|304390565|ref|ZP_07372518.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii subsp. curtisii ATCC 35241]
 gi|298235796|gb|ADI66928.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii ATCC 43063]
 gi|304326321|gb|EFL93566.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii subsp. curtisii ATCC 35241]
          Length = 322

 Score = 44.6 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 49/126 (38%), Gaps = 10/126 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          E+     +E +  + ++L +    E  Y         +GL
Sbjct: 192 IRDEAVHGYYIGYKYQLAMRESSESRRQEMKDYTFSLLMDLYDNEELYTETLY--DPLGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++++ AN+    +G E LF   +   NP     +S   D     +FF    + 
Sbjct: 250 T-EDVKKFLKYNANKALMNLGYEALFTADQVNVNPAILAALSPAADENH--DFFSGSGSS 306

Query: 116 YQQGAE 121
           Y  G  
Sbjct: 307 YAIGTA 312


>gi|227112968|ref|ZP_03826624.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 320

 Score = 44.6 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      ++ +  +  +L +    E+ Y  E      VG 
Sbjct: 190 IRDEAVHGYYIGYKFQRGLAKVDSARHQQVKNFAYDLLQDLYDNEVLYTQELY--DGVGW 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF  +    NP     +S   D     +FF    + 
Sbjct: 248 T-EDVKKFLHYNANKALMNLGYEALFPASMTDVNPAILSALSPNADENH--DFFSGSGSS 304

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 305 YVIGKAVNTEDEDWD 319


>gi|330908707|gb|EGH37221.1| ribonucleotide reductase of class 1b (aerobic), beta subunit
           [Escherichia coli AA86]
          Length = 319

 Score = 44.6 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQARHEELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP   +   +    ++N  FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|193890961|gb|ACF28634.1| ribonucleotide reductase [Amphidinium carterae]
          Length = 213

 Score = 44.6 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 17/43 (39%), Gaps = 7/43 (16%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLL 44
           RDE LH +F   +  +++   P            +++  A  +
Sbjct: 178 RDEGLHADFACLIYRKLQNHLPE-------DVVHSIMRGAVEV 213


>gi|332087397|gb|EGI92525.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
           boydii 5216-82]
          Length = 319

 Score = 44.6 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   + P    +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKIPLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP   +   +    ++N  FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|194433043|ref|ZP_03065326.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella
           dysenteriae 1012]
 gi|194418770|gb|EDX34856.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella
           dysenteriae 1012]
 gi|320180201|gb|EFW55137.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
           ATCC 9905]
 gi|332088601|gb|EGI93714.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
           dysenteriae 155-74]
          Length = 319

 Score = 44.6 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   + P    +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKIPLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|332162772|ref|YP_004299349.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|325667002|gb|ADZ43646.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
          Length = 323

 Score = 44.6 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +  +   +E +  +  +L +    EI Y  E++  G  G 
Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKLDNNRRQEIKNFAFDLLQDLYDNEIHY-TESLYDGV-GW 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF  ++   NP     +S   D     +FF    + 
Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPASQANVNPAILAALSPNADENH--DFFSGSGSS 307

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 308 YVIGKAVNTEDEDWD 322


>gi|319899230|ref|YP_004159323.1| ribonucleoside-diphosphate reductase beta chain [Bartonella
           clarridgeiae 73]
 gi|319403194|emb|CBI76753.1| ribonucleoside-diphosphate reductase beta chain [Bartonella
           clarridgeiae 73]
          Length = 324

 Score = 44.6 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 45/127 (35%), Gaps = 10/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +                 +E +  +  ML +   +E  Y         +GL
Sbjct: 194 IRDEAVHGYYIGYKFQLGFANLDKAKRQEIKDFAFNMLFDLYNIECKYTENLY--DSIGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115
                + ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 252 T-EDVKVFLHYNANKALMNLGFEALFPPEVCRVNPAILAALSPNSDENH--DFFSGSGSS 308

Query: 116 YQQGAEL 122
           Y  G  +
Sbjct: 309 YVIGKAV 315


>gi|318606878|emb|CBY28376.1| ribonucleotide reductase of class Ib (aerobic),beta subunit
           [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 323

 Score = 44.3 bits (104), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +  +   +E +  +  +L +    EI Y  E++  G  G 
Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKLDNNRRQEIKNFTFDLLQDLYDNEIHY-TESLYDGV-GW 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF  ++   NP     +S   D     +FF    + 
Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPASQANVNPAILAALSPNADENH--DFFSGSGSS 307

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 308 YVIGKAVNTEDEDWD 322


>gi|291455662|ref|ZP_06595052.1| ribonucleoside-diphosphate reductase, beta subunit [Bifidobacterium
           breve DSM 20213]
 gi|291382590|gb|EFE90108.1| ribonucleoside-diphosphate reductase, beta subunit [Bifidobacterium
           breve DSM 20213]
          Length = 330

 Score = 44.3 bits (104), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 10/130 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +       + Q  +  +L+E    E+ Y      +  VGL
Sbjct: 200 IRDEAVHGYYIGYKYQKGIAQLTDAERMDMQDYTYDLLNELYDNEVEYTQSLYDR--VGL 257

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115
                E+++++  N+    +G   LF       NP     +S   D     +FF    + 
Sbjct: 258 T-EDVEKFLRYNGNKALMNLGYPALFPAEICDVNPAILAALSPNADENH--DFFSGSGSS 314

Query: 116 YQQGAELKWD 125
           Y  G   + D
Sbjct: 315 YVMGKAEETD 324


>gi|321309596|ref|YP_004191925.1| ribonucleotide reductase subunit beta [Mycoplasma haemofelis str.
           Langford 1]
 gi|319801440|emb|CBY92086.1| ribonucleotide reductase of class Ib (aerobic), beta subunit
           [Mycoplasma haemofelis str. Langford 1]
          Length = 327

 Score = 44.3 bits (104), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 56/126 (44%), Gaps = 7/126 (5%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +   +  +I         KE ++K   +L E    EI Y      K  +GL
Sbjct: 197 IRDEAIHGLYIGVLSMEIFKTFNEEKQKEMKEKVICLLRELMANEIKYTELIYSK--IGL 254

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
                 +++++ AN+    +G E  +  T+   NP  + + +    K  +FF T+   Y 
Sbjct: 255 -VEDVNRFLEYNANKALQNLGFENEYSTTDKDINPIVF-NGLKTTTKSHDFFSTKGNGYI 312

Query: 118 QGAELK 123
           +  +++
Sbjct: 313 KTTKVE 318


>gi|50122260|ref|YP_051427.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           atrosepticum SCRI1043]
 gi|49612786|emb|CAG76236.1| ribonucleoside-diphosphate reductase 2 beta chain [Pectobacterium
           atrosepticum SCRI1043]
          Length = 320

 Score = 44.3 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      ++ +  +  +L +    E+ Y  E      VG 
Sbjct: 190 IRDEAVHGYYIGYKFQRALAKADPARQQQVKNFAYDLLQDLYDNEVLYTQELY--DGVGW 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF  +    NP     +S   D     +FF    + 
Sbjct: 248 T-EDVKKFLHYNANKALMNLGYEALFPASMTDVNPAILSALSPNADENH--DFFSGSGSS 304

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 305 YVIGKAVNTEDEDWD 319


>gi|170017903|ref|YP_001728822.1| ribonucleotide reductase, beta subunit [Leuconostoc citreum KM20]
 gi|169804760|gb|ACA83378.1| Ribonucleotide reductase, beta subunit [Leuconostoc citreum KM20]
          Length = 324

 Score = 44.3 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 3/87 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          + P   +   Q     +L+E    E  Y HE      +G 
Sbjct: 193 IRDESVHGTYIGYKFQIGFNKLPESESTALQSWMYDLLYELYENEEKYTHELYDD--LGW 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK 87
                  ++++ AN+    +G EP+F 
Sbjct: 251 T-EQVLTFLRYNANKALMNLGQEPMFP 276


>gi|291618545|ref|YP_003521287.1| NrdF [Pantoea ananatis LMG 20103]
 gi|291153575|gb|ADD78159.1| NrdF [Pantoea ananatis LMG 20103]
 gi|327394924|dbj|BAK12346.1| ribonucleoside-diphosphate reductase 2 beta subunit NrdF [Pantoea
           ananatis AJ13355]
          Length = 319

 Score = 44.3 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +  QQ +  +L      E+ Y         VG 
Sbjct: 189 IRDEAVHGYYIGYKYQKALEQVDEGRREALQQFAIDLLLALYENEVVYTEALYGD--VGW 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   + ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 247 -AEEVKTFLHYNANKALMNLGYEALFPAELTQVNPAILSALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|170765644|ref|ZP_02900455.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           albertii TW07627]
 gi|170124790|gb|EDS93721.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           albertii TW07627]
          Length = 319

 Score = 44.3 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 14/130 (10%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
           +RDE++H  +        K +     T  +E ++ +  +L E    E+ Y  E   +   
Sbjct: 189 IRDEAVHGYYIG--YKHQKNQEKISLTQREELKRFAFDLLLELYDNELQYTDELYAETTW 246

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRV 113
              A   + ++ + AN+    +G EPLF       NP     +S   D     +FF    
Sbjct: 247 ---ADDVKAFLCYNANKALMNLGYEPLFPAEMAKVNPAILAALSPNADENH--DFFSGSG 301

Query: 114 TEYQQGAELK 123
           + Y  G  ++
Sbjct: 302 SSYVMGKAVE 311


>gi|258508470|ref|YP_003171221.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           rhamnosus GG]
 gi|257148397|emb|CAR87370.1| Ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           rhamnosus GG]
 gi|259649782|dbj|BAI41944.1| ribonucleotide reductase beta subunit [Lactobacillus rhamnosus GG]
          Length = 326

 Score = 44.3 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ Q     +L++    E  Y ++   K     
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEAEQQQLQDWMYDLLYDLYENEEKYTNDLYAKTKW-- 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G E  F  T    NP   M+ +       +FF
Sbjct: 246 -TDEVLTFLRYNANKALMNLGQETAFPDTADDVNPIV-MNGISTSTANHDFF 295


>gi|229552273|ref|ZP_04440998.1| ribonucleoside-diphosphate reductase [Lactobacillus rhamnosus
           LMS2-1]
 gi|258539683|ref|YP_003174182.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           rhamnosus Lc 705]
 gi|229314345|gb|EEN80318.1| ribonucleoside-diphosphate reductase [Lactobacillus rhamnosus
           LMS2-1]
 gi|257151359|emb|CAR90331.1| Ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           rhamnosus Lc 705]
          Length = 326

 Score = 44.3 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ Q     +L++    E  Y ++   K     
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEAEQQQLQDWMYDLLYDLYENEEKYTNDLYAKTKW-- 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G E  F  T    NP   M+ +       +FF
Sbjct: 246 -TDEVLTFLRYNANKALMNLGQETAFPDTADDVNPIV-MNGISTSTANHDFF 295


>gi|57867410|ref|YP_189075.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis RP62A]
 gi|57638068|gb|AAW54856.1| ribonucleoside-diphosphate reductase 2, beta subunit
           [Staphylococcus epidermidis RP62A]
          Length = 340

 Score = 44.3 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 39/96 (40%), Gaps = 12/96 (12%)

Query: 3   DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
           DE++H +        + ++   E      ++ +++   +  +    E+ YA     K  +
Sbjct: 200 DETIHGSGTGYAAQVIFDKFSKEE----QEDIRKELMELFDQLYFNEVEYAASLYDK--L 253

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPF 93
           GL      +Y+Q+  NR    +G E +F     NP 
Sbjct: 254 GLT-EDVIRYIQYNGNRALMNLGWETVFNPEPFNPI 288


>gi|257069608|ref|YP_003155863.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Brachybacterium faecium DSM 4810]
 gi|256560426|gb|ACU86273.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Brachybacterium faecium DSM 4810]
          Length = 322

 Score = 43.9 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 50/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +       E +  + ++L E    E  Y  +      VG 
Sbjct: 192 IRDEAVHGYYIGYKYQKAVEKLSAERQAELKDYTFSLLMELYDNEEVYTEDIY--DPVGW 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                + ++++ AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 250 T-EDVKVFLRYNANKALMNLGYEGLFPQEATQVNPAILASLSPNADENH--DFFSGSGSS 306

Query: 116 YQQGAELK-----WD 125
           Y  G  ++     WD
Sbjct: 307 YVMGKAVETEDDDWD 321


>gi|325677552|ref|ZP_08157215.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus equi
           ATCC 33707]
 gi|325551623|gb|EGD21322.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus equi
           ATCC 33707]
          Length = 322

 Score = 43.9 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 8/123 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +             ++ +  +L      E+AYA +      VG 
Sbjct: 192 IRDEAVHGYYIGYKCRKALERLDASARDAHRRYTYALLETLYANEVAYAADLY--DEVGW 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEY 116
            A     YM+F AN+    +G EP+F+ +E   NP   +S +     E  +FF    + Y
Sbjct: 250 TAEVVS-YMRFNANKALANLGYEPMFRASECQVNPAI-LSALDPGAGENHDFFSGSGSAY 307

Query: 117 QQG 119
             G
Sbjct: 308 VIG 310


>gi|146322252|ref|YP_001174719.1| putative ribonucleotide reductase subunit beta [Lactococcus lactis]
 gi|145968743|gb|ABQ00021.1| putative ribonucleotide reductase subunit beta [Lactococcus lactis]
          Length = 316

 Score = 43.9 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 10/114 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +      Q   E      + F     + L E    E AY  E   +  +GL
Sbjct: 186 IRDESVHGTYLGYKFRQDFNELSITEQENFTNWMYSFLEELLDNEFAYTEEVYSE--IGL 243

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEK-NFF 109
                + ++++ AN+    +G +  FK       NP   +   I ++    +FF
Sbjct: 244 -VEDIKTFVKYNANKSLQNMGFDIYFKDASANDVNPI--VMNGISIETANHDFF 294


>gi|300718018|ref|YP_003742821.1| ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia
           billingiae Eb661]
 gi|299063854|emb|CAX60974.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia
           billingiae Eb661]
          Length = 319

 Score = 43.9 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DE++H  +      +   +       E QQ +  +L      E+AY  E +  G  G 
Sbjct: 189 IKDEAVHGYYIGYKYQKALEKESPARKDELQQFAVELLLALYENELAY-TEALYDGV-GW 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115
           +    ++++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 247 S-EEVKKFLHYNANKALMNLGYEALFPAEMTDVNPAILSALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  + 
Sbjct: 304 YVMGKAVD 311


>gi|123441277|ref|YP_001005264.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122088238|emb|CAL11027.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 323

 Score = 43.9 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +  +   +E +  +  +L +    EI Y  E++  G  G 
Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKVDNNRRQEIKNFAFDLLQDLYDNEIHY-TESLYDGV-GW 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF  ++   NP     +S   D     +FF    + 
Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPASQANVNPAILAALSPNADENH--DFFSGSGSS 307

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 308 YVIGKAVNTEDEDWD 322


>gi|238794433|ref|ZP_04638043.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           intermedia ATCC 29909]
 gi|238726228|gb|EEQ17772.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           intermedia ATCC 29909]
          Length = 330

 Score = 43.9 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 54/136 (39%), Gaps = 17/136 (12%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      Q   +  +   +E +  +  +L +    E+ Y  +   K  VG 
Sbjct: 200 IRDEAVHGYYIGYKFQQGLEKVDNARRQEIKNFAFDLLQDLYDNEVRYTEDLYDK--VGW 257

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
                ++++ + AN+    +G E LF  ++     +S  I      +  +  +FF    +
Sbjct: 258 T-EDVKKFLHYNANKALMNLGYEALFPASQAA---VSPAILAALSPNADENHDFFSGSGS 313

Query: 115 EYQQGAEL-----KWD 125
            Y  G  +      WD
Sbjct: 314 SYVIGKAINTEDEDWD 329


>gi|312869696|ref|ZP_07729843.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           oris PB013-T2-3]
 gi|311094745|gb|EFQ53042.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           oris PB013-T2-3]
          Length = 339

 Score = 43.9 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E      ++ +      L+E    E  Y H    K  +G 
Sbjct: 197 LRDESVHGTYIGYKFQVGLHERTEKQQQDMKDWLYNFLYELYDNEEKYTHLLYDK--IGW 254

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 255 T-DDVLTFIRYNANKALMNLGQDPLFPDTAADVNPVV-MNGISTSTSNHDFF 304


>gi|295395248|ref|ZP_06805456.1| ribonucleotide-diphosphate reductase subunit beta [Brevibacterium
           mcbrellneri ATCC 49030]
 gi|294972010|gb|EFG47877.1| ribonucleotide-diphosphate reductase subunit beta [Brevibacterium
           mcbrellneri ATCC 49030]
          Length = 324

 Score = 43.9 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 52/132 (39%), Gaps = 12/132 (9%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +           E +  +  +L++    E+ Y H+      VGL
Sbjct: 194 IRDEAVHGYYIGYKYQRALANESTERRDELKDYTFALLYDLYENEVQYTHDLY--DSVGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115
           +    ++++ + AN+    +G E +F  T    NP     +S   D     +FF    + 
Sbjct: 252 S-EDVKKFLNYNANKALMNLGYEAMFPSTVTDVNPAILSALSPSSDENH--DFFSGSGSS 308

Query: 116 YQ--QGAELKWD 125
           Y   +    + D
Sbjct: 309 YVIGKAENTEDD 320


>gi|284922618|emb|CBG35706.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli
           042]
          Length = 319

 Score = 43.9 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNMKKISQAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|307547024|ref|YP_003899503.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas
           elongata DSM 2581]
 gi|307219048|emb|CBV44318.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas
           elongata DSM 2581]
          Length = 324

 Score = 43.9 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 3/90 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      ++ +  +  +L +    E+ Y         VGL
Sbjct: 194 IRDEAVHGYYIGYKFQRALEKESAERQRQIKDTTYDLLLDLYDNEVQYTESLY--DEVGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90
                + ++ + AN+    +G E LF    
Sbjct: 252 T-EDVKAFLHYNANKALMNLGYEALFPNAT 280


>gi|269941513|emb|CBI49911.1| ribonucleoside-diphosphate reductase subunit [Staphylococcus aureus
           subsp. aureus TW20]
          Length = 340

 Score = 43.9 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 38/96 (39%), Gaps = 12/96 (12%)

Query: 3   DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
           DE++H +        +  +   E      ++ +++   +  +    E+ YA     K  +
Sbjct: 200 DETIHGSGTGYAAQVIFEKFSKEE----QEDIRKELMELFDQLYFNEVEYAASLYDK--L 253

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPF 93
           GL      +Y+Q+  NR    +G E +F     NP 
Sbjct: 254 GLT-EDVIRYIQYNGNRALMNLGWETVFNPEPFNPI 288


>gi|218706176|ref|YP_002413695.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           UMN026]
 gi|293406173|ref|ZP_06650099.1| ribonucleotide reductase beta subunit [Escherichia coli FVEC1412]
 gi|298381910|ref|ZP_06991507.1| ribonucleoside-diphosphate reductase subunit beta [Escherichia coli
           FVEC1302]
 gi|300898656|ref|ZP_07116977.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 198-1]
 gi|301019059|ref|ZP_07183270.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 69-1]
 gi|331674197|ref|ZP_08374957.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA280]
 gi|218433273|emb|CAR14173.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli UMN026]
 gi|291426179|gb|EFE99211.1| ribonucleotide reductase beta subunit [Escherichia coli FVEC1412]
 gi|298277050|gb|EFI18566.1| ribonucleoside-diphosphate reductase subunit beta [Escherichia coli
           FVEC1302]
 gi|300357684|gb|EFJ73554.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 198-1]
 gi|300399412|gb|EFJ82950.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 69-1]
 gi|331068291|gb|EGI39686.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA280]
          Length = 319

 Score = 43.9 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      + + +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKSQEKISQAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|25027435|ref|NP_737489.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           efficiens YS-314]
 gi|259506419|ref|ZP_05749321.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Corynebacterium efficiens YS-314]
 gi|23492716|dbj|BAC17689.1| putative ribonucleotide reductase [Corynebacterium efficiens
           YS-314]
 gi|259165992|gb|EEW50546.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Corynebacterium efficiens YS-314]
          Length = 339

 Score = 43.5 bits (102), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 48/133 (36%), Gaps = 11/133 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +               ++  +L +    E+ Y         +G 
Sbjct: 209 IRDEAIHGYYIGYKYQKHIATLSPEKQATNHDEAVELLLDLYDNELEYTRHVYDD--LGW 266

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVI-DLKKEKNFFETRVTEYQ 117
           +      ++++ AN+    +G E +F   +  F    M+ +     +  +FF    + Y 
Sbjct: 267 S-EDVSAFLRYNANKAMQNLGYESIFPVDQCKFDPGVMTSLDPSSNENHDFFSGSGSSYV 325

Query: 118 QG-----AELKWD 125
            G     ++  WD
Sbjct: 326 IGDVEATSDEDWD 338


>gi|171779436|ref|ZP_02920400.1| hypothetical protein STRINF_01281 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282053|gb|EDT47484.1| hypothetical protein STRINF_01281 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 316

 Score = 43.5 bits (102), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 10/114 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +      Q   E      + F     + L E    E AY  E   +  +GL
Sbjct: 186 IRDESVHGTYLGYKFRQDFNELAITEQENFTNWMYSFLEELLDNEFAYTEEVYSE--IGL 243

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEK-NFF 109
                + ++++ AN+    +G +  FK       NP   +   I ++    +FF
Sbjct: 244 -VEDIKTFVKYNANKSLQNMGFDIYFKDASANDVNPI--VMNGISIETANHDFF 294


>gi|146318863|ref|YP_001198575.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           suis 05ZYH33]
 gi|146321071|ref|YP_001200782.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           suis 98HAH33]
 gi|223932819|ref|ZP_03624816.1| Ribonucleoside-diphosphate reductase [Streptococcus suis 89/1591]
 gi|253751944|ref|YP_003025085.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus suis
           SC84]
 gi|253753767|ref|YP_003026908.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus suis
           P1/7]
 gi|253755355|ref|YP_003028495.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus suis
           BM407]
 gi|330833008|ref|YP_004401833.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           suis ST3]
 gi|145689669|gb|ABP90175.1| Ribonucleotide reductase, beta subunit [Streptococcus suis 05ZYH33]
 gi|145691877|gb|ABP92382.1| Ribonucleotide reductase, beta subunit [Streptococcus suis 98HAH33]
 gi|223898528|gb|EEF64892.1| Ribonucleoside-diphosphate reductase [Streptococcus suis 89/1591]
 gi|251816233|emb|CAZ51860.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus suis SC84]
 gi|251817819|emb|CAZ55572.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus suis BM407]
 gi|251820013|emb|CAR46187.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus suis P1/7]
 gi|292558520|gb|ADE31521.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           suis GZ1]
 gi|319758306|gb|ADV70248.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           suis JS14]
 gi|329307231|gb|AEB81647.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           suis ST3]
          Length = 319

 Score = 43.5 bits (102), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E       + +     +L++    E  Y         VG 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELSEEEQDKLRDWMYDLLYQLYENEEGYTRSLY--DAVGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 246 T-EEVLTFLRYNANKALMNLGQDPLFPDSADDVNPII-MNGISTGTSNHDFF 295


>gi|261820460|ref|YP_003258566.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           wasabiae WPP163]
 gi|261604473|gb|ACX86959.1| Ribonucleoside-diphosphate reductase [Pectobacterium wasabiae
           WPP163]
          Length = 320

 Score = 43.5 bits (102), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      ++ +  +  +L +    E+ Y  E      VG 
Sbjct: 190 IRDEAVHGYYIGYKFQRGLAKADPARQQQVKNFAYDLLQDLYDNEVLYTQELY--DGVGW 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF  +    NP     +S   D     +FF    + 
Sbjct: 248 T-EDVKKFLHYNANKALMNLGYEALFPASMTDVNPAILSALSPNADENH--DFFSGSGSS 304

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 305 YVIGKAVNTEDEDWD 319


>gi|330861133|emb|CBX71396.1| ribonucleoside-diphosphate reductase 2 subunit beta [Yersinia
           enterocolitica W22703]
          Length = 239

 Score = 43.5 bits (102), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +  +   +E +  +  +L +    EI Y  E++  G  G 
Sbjct: 109 IRDEAVHGYYIGYKFQKGLEKLDNNRRQEIKNFAFDLLQDLYDNEIHY-TESLYDGV-GW 166

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF  ++   NP     +S   D     +FF    + 
Sbjct: 167 T-EDVKKFLHYNANKALMNLGYEALFPASQANVNPAILAALSPNADENH--DFFSGSGSS 223

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 224 YVIGKAVNTEDEDWD 238


>gi|302023955|ref|ZP_07249166.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           suis 05HAS68]
          Length = 320

 Score = 43.5 bits (102), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E       + +     +L++    E  Y         VG 
Sbjct: 189 IRDESVHGTYIGYKFQLGFNELSEEEQDKLRDWMYDLLYQLYENEEGYTRSLY--DAVGW 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 247 T-EEVLTFLRYNANKALMNLGQDPLFPDSADDVNPII-MNGISTGTSNHDFF 296


>gi|253689503|ref|YP_003018693.1| Ribonucleoside-diphosphate reductase [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251756081|gb|ACT14157.1| Ribonucleoside-diphosphate reductase [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 320

 Score = 43.5 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      ++ +  +  +L +    E+ Y  E      VG 
Sbjct: 190 IRDEAVHGYYIGYKFQRGLAKADPARQQQVKNFAYDLLQDLYDNEVLYTQELY--DGVGW 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF  +    NP     +S   D     +FF    + 
Sbjct: 248 T-EDVKKFLHYNANKALMNLGYEALFPASMTDVNPAILSALSPNADENH--DFFSGSGSS 304

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 305 YVIGKAVNTEDEDWD 319


>gi|227329868|ref|ZP_03833892.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 320

 Score = 43.5 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      ++ +  +  +L +    E+ Y  E      VG 
Sbjct: 190 IRDEAVHGYYIGYKFQRGLAKADPARQQQVKNFAYDLLQDLYDNEVLYTQELY--DGVGW 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF  +    NP     +S   D     +FF    + 
Sbjct: 248 T-EDVKKFLHYNANKALMNLGYEALFPASMTDVNPAILSALSPNADENH--DFFSGSGSS 304

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 305 YVIGKAVNTEDEDWD 319


>gi|1395207|gb|AAB81405.1| ribonucleotide reductase R2-1 small subunit [Mycobacterium
           tuberculosis str. Erdman]
          Length = 321

 Score = 43.5 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +       + ++ +  +LH     EI YAH+      +G 
Sbjct: 191 IRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDLY--DELGW 248

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVID--LKKEKNFFETRVTE 115
                  YM++ AN+    +G +P F       NP   +   +D    +  +FF    + 
Sbjct: 249 T-DDVLPYMRYNANKALANLGYQPAFDRDTCQVNPA--VRAALDPGAGENHDFFSGSGSS 305

Query: 116 YQQG-----AELKWD 125
           Y  G      +  WD
Sbjct: 306 YVMGTHQPTTDTDWD 320


>gi|227548647|ref|ZP_03978696.1| ribonucleoside-diphosphate reductase [Corynebacterium
           lipophiloflavum DSM 44291]
 gi|227079261|gb|EEI17224.1| ribonucleoside-diphosphate reductase [Corynebacterium
           lipophiloflavum DSM 44291]
          Length = 332

 Score = 43.5 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 39/90 (43%), Gaps = 3/90 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      + + +       E +  +  +L++    E  Y  +      +G 
Sbjct: 202 IRDEAVHGYYIGYKYQRGQADLSQAERDELKDYTFNLLYDLYENETQYTEDIY--DPLGW 259

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90
                ++++++ AN+  + +G E LF   E
Sbjct: 260 T-EDVKRFLRYNANKALNNLGYEGLFPQDE 288


>gi|184154755|ref|YP_001843095.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           fermentum IFO 3956]
 gi|260663216|ref|ZP_05864108.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           fermentum 28-3-CHN]
 gi|183226099|dbj|BAG26615.1| ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
           fermentum IFO 3956]
 gi|260552408|gb|EEX25459.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           fermentum 28-3-CHN]
 gi|299782855|gb|ADJ40853.1| Ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
           fermentum CECT 5716]
          Length = 333

 Score = 43.5 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          +      ++ ++     L+E    E  Y H       +G 
Sbjct: 191 LRDESVHGTYIGYKFQVGMNQLTEKQQQDMKRWMYDFLYELYDNEEKYTHVLY--DQIGW 248

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 249 T-DDVLVFIRYNANKALMNLGQDPLFPDTASDVNPVV-MNGISTTTSNHDFF 298


>gi|15841457|ref|NP_336494.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis CDC1551]
 gi|57116932|ref|YP_177853.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Rv]
 gi|148661790|ref|YP_001283313.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Ra]
 gi|148823195|ref|YP_001287949.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis F11]
 gi|167970496|ref|ZP_02552773.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Ra]
 gi|215404217|ref|ZP_03416398.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|215411671|ref|ZP_03420467.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 94_M4241A]
 gi|215427336|ref|ZP_03425255.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T92]
 gi|215430897|ref|ZP_03428816.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|215446189|ref|ZP_03432941.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|218753694|ref|ZP_03532490.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis GM 1503]
 gi|219557941|ref|ZP_03537017.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T17]
 gi|253798971|ref|YP_003031972.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis KZN 1435]
 gi|254232151|ref|ZP_04925478.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
           [Mycobacterium tuberculosis C]
 gi|254364798|ref|ZP_04980844.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
           [Mycobacterium tuberculosis str. Haarlem]
 gi|254551002|ref|ZP_05141449.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis '98-R604 INH-RIF-EM']
 gi|260186953|ref|ZP_05764427.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis CPHL_A]
 gi|260201080|ref|ZP_05768571.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T46]
 gi|289443470|ref|ZP_06433214.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           tuberculosis T46]
 gi|289447597|ref|ZP_06437341.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis CPHL_A]
 gi|289554242|ref|ZP_06443452.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis KZN 605]
 gi|289570077|ref|ZP_06450304.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis T17]
 gi|289746076|ref|ZP_06505454.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|289750559|ref|ZP_06509937.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis T92]
 gi|289754082|ref|ZP_06513460.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|289758093|ref|ZP_06517471.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|289762136|ref|ZP_06521514.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
           [Mycobacterium tuberculosis GM 1503]
 gi|294996911|ref|ZP_06802602.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 210]
 gi|297634550|ref|ZP_06952330.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN 4207]
 gi|297731538|ref|ZP_06960656.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN R506]
 gi|298525478|ref|ZP_07012887.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 94_M4241A]
 gi|306776213|ref|ZP_07414550.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu001]
 gi|306779994|ref|ZP_07418331.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu002]
 gi|306784744|ref|ZP_07423066.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu003]
 gi|306789101|ref|ZP_07427423.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu004]
 gi|306793436|ref|ZP_07431738.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu005]
 gi|306797819|ref|ZP_07436121.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu006]
 gi|306803700|ref|ZP_07440368.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu008]
 gi|306808274|ref|ZP_07444942.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu007]
 gi|306968097|ref|ZP_07480758.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu009]
 gi|306972322|ref|ZP_07484983.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu010]
 gi|307080033|ref|ZP_07489203.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu011]
 gi|307084607|ref|ZP_07493720.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu012]
 gi|313658871|ref|ZP_07815751.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN V2475]
 gi|1710397|sp|Q10840|RIR2A_MYCTU RecName: Full=Ribonucleoside-diphosphate reductase subunit beta
           nrdF1; AltName: Full=Ribonucleotide reductase R2-1 small
           subunit; AltName: Full=Ribonucleotide reductase small
           subunit 1
 gi|13881697|gb|AAK46308.1| ribonucleoside-diphosphate reductase R2-1, beta subunit
           [Mycobacterium tuberculosis CDC1551]
 gi|38490297|emb|CAE55444.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF1
           (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN)
           [Mycobacterium tuberculosis H37Rv]
 gi|124601210|gb|EAY60220.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
           [Mycobacterium tuberculosis C]
 gi|134150312|gb|EBA42357.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
           [Mycobacterium tuberculosis str. Haarlem]
 gi|148505942|gb|ABQ73751.1| ribonucleoside-diphosphate reductase subunit beta NrdF1
           [Mycobacterium tuberculosis H37Ra]
 gi|148721722|gb|ABR06347.1| ribonucleoside-diphosphate reductase beta subunit nrdF1
           [Mycobacterium tuberculosis F11]
 gi|253320474|gb|ACT25077.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis KZN 1435]
 gi|289416389|gb|EFD13629.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           tuberculosis T46]
 gi|289420555|gb|EFD17756.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis CPHL_A]
 gi|289438874|gb|EFD21367.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis KZN 605]
 gi|289543831|gb|EFD47479.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis T17]
 gi|289686604|gb|EFD54092.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|289691146|gb|EFD58575.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis T92]
 gi|289694669|gb|EFD62098.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|289709642|gb|EFD73658.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
           [Mycobacterium tuberculosis GM 1503]
 gi|289713657|gb|EFD77669.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|298495272|gb|EFI30566.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 94_M4241A]
 gi|308215325|gb|EFO74724.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu001]
 gi|308327098|gb|EFP15949.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu002]
 gi|308330477|gb|EFP19328.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu003]
 gi|308334311|gb|EFP23162.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu004]
 gi|308338113|gb|EFP26964.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu005]
 gi|308341805|gb|EFP30656.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu006]
 gi|308345291|gb|EFP34142.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu007]
 gi|308349595|gb|EFP38446.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu008]
 gi|308354222|gb|EFP43073.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu009]
 gi|308358200|gb|EFP47051.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu010]
 gi|308362132|gb|EFP50983.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu011]
 gi|308365786|gb|EFP54637.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu012]
 gi|323719468|gb|EGB28595.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis CDC1551A]
 gi|326903590|gb|EGE50523.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis W-148]
 gi|328458726|gb|AEB04149.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis KZN 4207]
          Length = 322

 Score = 43.5 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +       + ++ +  +LH     EI YAH+      +G 
Sbjct: 192 IRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDLY--DELGW 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVID--LKKEKNFFETRVTE 115
                  YM++ AN+    +G +P F       NP   +   +D    +  +FF    + 
Sbjct: 250 T-DDVLPYMRYNANKALANLGYQPAFDRDTCQVNPA--VRAALDPGAGENHDFFSGSGSS 306

Query: 116 YQQG-----AELKWD 125
           Y  G      +  WD
Sbjct: 307 YVMGTHQPTTDTDWD 321


>gi|324005772|gb|EGB74991.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 57-2]
          Length = 319

 Score = 43.5 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISQAQREELKSFAFDLLLELYDNELQYTDELYAETTW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP   +   +    ++N  FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|281491477|ref|YP_003353457.1| ribonucleoside-diphosphate reductase subunit beta [Lactococcus
           lactis subsp. lactis KF147]
 gi|281375195|gb|ADA64708.1| Ribonucleoside-diphosphate reductase, beta chain [Lactococcus
           lactis subsp. lactis KF147]
          Length = 325

 Score = 43.5 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 6/95 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E       EF+     +L++    E  Y+H    K  VG 
Sbjct: 196 IRDESVHGTYIGYKFQLGFNELSEDEQGEFRDWMYELLYQLYENEEKYSHLLYDK--VGW 253

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP 92
                  ++++ AN+    +G +PLF  T    NP
Sbjct: 254 T-DEVLTFLRYNANKALMNLGQDPLFPDTAADVNP 287


>gi|31793160|ref|NP_855653.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           bovis AF2122/97]
 gi|224990358|ref|YP_002645045.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
           bovis BCG str. Tokyo 172]
 gi|260205258|ref|ZP_05772749.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis K85]
 gi|289574653|ref|ZP_06454880.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis K85]
 gi|31618751|emb|CAD94705.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF1
           (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN)
           [Mycobacterium bovis AF2122/97]
 gi|224773471|dbj|BAH26277.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
           bovis BCG str. Tokyo 172]
 gi|289539084|gb|EFD43662.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis K85]
          Length = 322

 Score = 43.5 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +       + ++ +  +LH     EI YAH+      +G 
Sbjct: 192 IRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDLY--DELGW 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVID--LKKEKNFFETRVTE 115
                  YM++ AN+    +G +P F       NP   +   +D    +  +FF    + 
Sbjct: 250 T-DDVLPYMRYNANKALANLGYQPAFDRDTCQVNPA--VRAALDPGAGENHDFFSGSGSS 306

Query: 116 YQQG-----AELKWD 125
           Y  G      +  WD
Sbjct: 307 YVMGTHQPTTDTDWD 321


>gi|116511803|ref|YP_809019.1| ribonucleotide-diphosphate reductase subunit beta [Lactococcus
           lactis subsp. cremoris SK11]
 gi|125624347|ref|YP_001032830.1| ribonucleotide-diphosphate reductase subunit beta [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|116107457|gb|ABJ72597.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Lactococcus lactis subsp. cremoris SK11]
 gi|124493155|emb|CAL98119.1| ribonucleoside-diphosphate reductase beta chain [Lactococcus lactis
           subsp. cremoris MG1363]
 gi|300071131|gb|ADJ60531.1| ribonucleotide-diphosphate reductase subunit beta [Lactococcus
           lactis subsp. cremoris NZ9000]
          Length = 325

 Score = 43.5 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 6/95 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E       EF+     +L++    E  Y+H    K  VG 
Sbjct: 196 IRDESVHGTYIGYKFQLGFNELSEDEQSEFRDWMYELLYKLYENEENYSHLLYDK--VGW 253

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP 92
                  ++++ AN+    +G +PLF  T    NP
Sbjct: 254 T-DEVLTFLRYNANKALMNLGQDPLFPDTAADVNP 287


>gi|295397108|ref|ZP_06807219.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus
           viridans ATCC 11563]
 gi|294974650|gb|EFG50366.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus
           viridans ATCC 11563]
          Length = 338

 Score = 43.5 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 43/116 (37%), Gaps = 14/116 (12%)

Query: 1   MRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
           +RDES+H  +         NQ+ I+       E +     +L +    E  Y  E   + 
Sbjct: 208 IRDESVHGTYLGYKFQLGYNQLSIDE----QNELKDWMYALLFDLMENEEKYTEEIYTQ- 262

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK--YTENPFPWMSEVIDLKKEK-NFF 109
            VG        ++ + AN+    +G EP +     EN  P +   I       +FF
Sbjct: 263 -VGWTKE-VNTFVHYNANKALQNLGFEPFYPDGTAENVNPIVMNGISTDSSNHDFF 316


>gi|153949141|ref|YP_001400043.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis IP 31758]
 gi|152960636|gb|ABS48097.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia
           pseudotuberculosis IP 31758]
          Length = 323

 Score = 43.5 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 53/136 (38%), Gaps = 17/136 (12%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +   +  +E +  +  +L +    E+ Y  +      VG 
Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKVDSVHRQEIKNFAFDLLQDLYDNEVRYTEDLY--DHVGW 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
                ++++ + AN+    +G E LF  ++     +S  I      +  +  +FF    +
Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPASQAA---VSPAILAALSPNADENHDFFSGSGS 306

Query: 115 EYQQGAEL-----KWD 125
            Y  G  +      WD
Sbjct: 307 SYVIGKAVNTEDEDWD 322


>gi|227514022|ref|ZP_03944071.1| ribonucleoside-diphosphate reductase [Lactobacillus fermentum ATCC
           14931]
 gi|227087608|gb|EEI22920.1| ribonucleoside-diphosphate reductase [Lactobacillus fermentum ATCC
           14931]
          Length = 333

 Score = 43.5 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          +      ++ ++     L+E    E  Y H       +G 
Sbjct: 191 LRDESVHGTYIGYKFQVGMNQLTEKQQQDMKRWMYDFLYELYDNEEKYTHVLY--DQIGW 248

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 249 T-DDVLVFIRYNANKALMNLGQDPLFPDTASDVNPVV-MNGISTTTSNHDFF 298


>gi|328710829|ref|XP_003244373.1| PREDICTED: hypothetical protein LOC100575936 [Acyrthosiphon pisum]
          Length = 66

 Score = 43.5 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 5/53 (9%)

Query: 66  EQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR--VTEY 116
           + Y+   A+R   ++G +       +PF    E+   + + NFFE R   T Y
Sbjct: 8   KIYIGDFADRLLKELGFQQFTGRQTHPF---MELTPQQGKTNFFERRLSNTNY 57


>gi|15672956|ref|NP_267130.1| ribonucleotide-diphosphate reductase subunit beta [Lactococcus
           lactis subsp. lactis Il1403]
 gi|12723917|gb|AAK05072.1|AE006332_1 ribonucleoside-diphosphate reductase beta chain [Lactococcus lactis
           subsp. lactis Il1403]
 gi|326406518|gb|ADZ63589.1| ribonucleoside-diphosphate reductase beta chain [Lactococcus lactis
           subsp. lactis CV56]
          Length = 325

 Score = 43.5 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 6/95 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E       EF+     +L++    E  Y+H    K  VG 
Sbjct: 196 IRDESVHGTYIGYKFQLGFNELSEDEQGEFRDWMYELLYQLYENEEKYSHLLYDK--VGW 253

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP 92
                  ++++ AN+    +G +PLF  T    NP
Sbjct: 254 T-DEVLTFLRYNANKALMNLGQDPLFPDTAADVNP 287


>gi|331648397|ref|ZP_08349485.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M605]
 gi|331042144|gb|EGI14286.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M605]
          Length = 319

 Score = 43.5 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQTRREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP   +   +    ++N  FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|281179683|dbj|BAI56013.1| ribonucleoside-diphosphate reductase beta subunit [Escherichia coli
           SE15]
          Length = 319

 Score = 43.5 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQARREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP   +   +    ++N  FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|207112033|ref|ZP_03246195.1| hypothetical protein HpylH_23419 [Helicobacter pylori
          HPKX_438_CA4C1]
          Length = 32

 Score = 43.5 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 13/32 (40%)

Query: 47 AYAHETMPKGFVGLNAPSCEQYMQFIANRRCH 78
           +A   +     GLN      Y++++ N R  
Sbjct: 1  EWACYVIGNEVPGLNEKMITDYIRYLGNLRWK 32


>gi|331684294|ref|ZP_08384886.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H299]
 gi|331077909|gb|EGI49115.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H299]
          Length = 319

 Score = 43.1 bits (101), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQARREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP   +   +    ++N  FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|307132178|ref|YP_003884194.1| ribonucleoside-diphosphate reductase 2, subunit beta, ferritin-like
           protein [Dickeya dadantii 3937]
 gi|306529707|gb|ADM99637.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Dickeya dadantii 3937]
          Length = 330

 Score = 43.1 bits (101), Expect = 0.012,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      Q          ++ Q  +  +L      E+ Y HE      VG 
Sbjct: 200 IRDEAVHGYYIGYKYQQGLKRVGTQQQRDLQAFAYDLLQTLYDNEVDYTHELYDD--VGW 257

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN--FFETRVTE 115
           +     +++ + AN+    +G E LF       NP   +   +    E+N  FF    + 
Sbjct: 258 S-DDVVKFLHYNANKALMNLGYEALFPAGMTDVNPA--ILAALSPGAEENHDFFSGAGSS 314

Query: 116 YQQGAELK-----WD 125
           Y  G  ++     WD
Sbjct: 315 YVIGKAVETEDEDWD 329


>gi|331654159|ref|ZP_08355159.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M718]
 gi|331047541|gb|EGI19618.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M718]
          Length = 319

 Score = 43.1 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISQAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILTALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|317049232|ref|YP_004116880.1| ribonucleoside-diphosphate reductase [Pantoea sp. At-9b]
 gi|316950849|gb|ADU70324.1| Ribonucleoside-diphosphate reductase [Pantoea sp. At-9b]
          Length = 322

 Score = 43.1 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 48/128 (37%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E QQ +  +L      E+ Y         VG 
Sbjct: 192 IRDEAVHGYYIGYKYQKALENVDDARREELQQFAIELLLALYENEVVYTEALYAD--VGW 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   + ++ + AN+    +G E LF     T NP     +S   D     +FF    + 
Sbjct: 250 -AEEVKTFLHYNANKALMNLGYEALFPAELTTVNPAILAALSPNADENH--DFFSGSGSS 306

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 307 YVMGKAVE 314


>gi|215487997|ref|YP_002330428.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O127:H6 str. E2348/69]
 gi|215266069|emb|CAS10489.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli O127:H6 str. E2348/69]
          Length = 319

 Score = 43.1 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISQAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|296117839|ref|ZP_06836422.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           ammoniagenes DSM 20306]
 gi|295969070|gb|EFG82312.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           ammoniagenes DSM 20306]
          Length = 328

 Score = 43.1 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 46/130 (35%), Gaps = 9/130 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +           N        Q +   +L +    E  +         +G 
Sbjct: 199 IRDEAIHGYYIGYKYQNYLK-NDKARHAANQDEIVDLLLDLYDNESHFTEAVY--DQIGW 255

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVI-DLKKEKNFFETRVTEYQ 117
                + ++++ AN+  + +G E +F   E  F    M+ +     +  +FF    + Y 
Sbjct: 256 T-EDVKAFLRYNANKAMNNLGYEAIFPQEECKFNAGVMTSLDPSANENHDFFSGSGSSYV 314

Query: 118 --QGAELKWD 125
             +  E   D
Sbjct: 315 IGKAEETTDD 324


>gi|293572347|ref|ZP_06683339.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E980]
 gi|291607581|gb|EFF36911.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E980]
          Length = 316

 Score = 43.1 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 10/114 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +      Q   E      + +     + L E    E AY  E   +  +GL
Sbjct: 186 IRDESVHGTYLGYKFRQDFNELSITEQENYTNWMYSFLEELLDNEFAYTEEVYSE--IGL 243

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEK-NFF 109
                + ++++ AN+    +G +  FK       NP   +   I ++    +FF
Sbjct: 244 -VEDIKTFVKYNANKSLQNMGFDIYFKDASANDVNPI--VMNGISIETANHDFF 294


>gi|227358546|ref|ZP_03842871.1| ribonucleoside-diphosphate reductase beta chain [Proteus mirabilis
           ATCC 29906]
 gi|227161257|gb|EEI46331.1| ribonucleoside-diphosphate reductase beta chain [Proteus mirabilis
           ATCC 29906]
          Length = 337

 Score = 43.1 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 11/133 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +         +    L  ++ +  + ++L +    E+ Y  +      VG 
Sbjct: 207 IRDEAVHGYYIGYKFQNQLLNKSSLEKQDIKDFAFSLLLDLYDNEVKYTEDLY--DSVGW 264

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVI--DLKKEKNFFETRVTEYQ 117
                ++++ + AN+    +G E LF     N  P +   +  D  +  +FF    + Y 
Sbjct: 265 T-EDVKKFLHYNANKALMNLGYEALFPDEITNVSPAILSSLSPDANENHDFFSGSGSSYV 323

Query: 118 QGAEL-----KWD 125
            G  +      WD
Sbjct: 324 IGKTINTEDDDWD 336


>gi|300941043|ref|ZP_07155562.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 21-1]
 gi|300454207|gb|EFK17700.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 21-1]
          Length = 319

 Score = 43.1 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISQAQREELKNFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|293415927|ref|ZP_06658567.1| ribonucleoside-diphosphate reductase [Escherichia coli B185]
 gi|291432116|gb|EFF05098.1| ribonucleoside-diphosphate reductase [Escherichia coli B185]
          Length = 319

 Score = 43.1 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP   +   +    ++N  FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|203288309|ref|YP_002223359.1| ribonucleoside-diphosphate reductase, beta subunit [Borrelia
           recurrentis A1]
 gi|203288575|ref|YP_002223482.1| ribonucleoside-diphosphate reductase beta subunit [Borrelia
           duttonii Ly]
 gi|201084282|gb|ACH93870.1| ribonucleoside-diphosphate reductase beta subunit [Borrelia
           duttonii Ly]
 gi|201085529|gb|ACH95102.1| ribonucleoside-diphosphate reductase, beta subunit [Borrelia
           recurrentis A1]
          Length = 321

 Score = 42.7 bits (100), Expect = 0.015,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 52/125 (41%), Gaps = 15/125 (12%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTML---HEATLLEIAYAHETMPKGF 57
           +RDES+H  F   +    + E   +  KE +   + ML    +   LE  Y  E      
Sbjct: 192 LRDESVHGVFVGLL---AQEEFDKMTMKEQELAYKEMLLILEKLYSLEREYTKELYSC-- 246

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRV 113
           VGL +   + ++++ A++    +G +  F   +   NP   +   +    +  +FF T+ 
Sbjct: 247 VGLESA-VDVFVRYNADKALMNLGFDTKFNIKDTDVNPL--VLNGLRTDTKTHDFFSTKG 303

Query: 114 TEYQQ 118
             Y +
Sbjct: 304 NGYIK 308


>gi|188533084|ref|YP_001906881.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia
           tasmaniensis Et1/99]
 gi|188028126|emb|CAO95983.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia
           tasmaniensis Et1/99]
          Length = 319

 Score = 42.7 bits (100), Expect = 0.015,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DE++H  +      +   +      +E QQ +  +L E    E+AY  E +  G  G 
Sbjct: 189 IKDEAVHGYYIGYKYQKSLEKETAPRKEELQQFAIDLLLELYENEVAY-TEALYAGV-GW 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G + LF       NP     +S   D     +FF    + 
Sbjct: 247 -QEDVKKFLHYNANKALMNLGYQALFPSYMTDVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK-----WD 125
           Y  G  ++     WD
Sbjct: 304 YVMGKAVETEDEDWD 318


>gi|26249071|ref|NP_755111.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           CFT073]
 gi|227888210|ref|ZP_04006015.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           83972]
 gi|300986153|ref|ZP_07177743.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 45-1]
 gi|301050518|ref|ZP_07197394.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 185-1]
 gi|26109478|gb|AAN81681.1|AE016765_83 Ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli
           CFT073]
 gi|227834850|gb|EEJ45316.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           83972]
 gi|300297774|gb|EFJ54159.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 185-1]
 gi|300407907|gb|EFJ91445.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 45-1]
 gi|307554652|gb|ADN47427.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
           ABU 83972]
 gi|315290985|gb|EFU50350.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 153-1]
          Length = 319

 Score = 42.7 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 48/128 (37%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQARREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A     ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -ADDVTAFLCYNANKALMNLGYEPLFPAGMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|189490606|ref|YP_001957176.1| hypothetical ribonucleotide reductase beta subunit [Pseudomonas
           phage 201phi2-1]
 gi|164609671|gb|ABY63280.1| hypothetical ribonucleotide reductase beta subunit [Pseudomonas
           phage 201phi2-1]
          Length = 386

 Score = 42.7 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 46/122 (37%), Gaps = 23/122 (18%)

Query: 3   DE-SLHLNFGIDVINQI-KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM--PKGFV 58
           DE  +H  FG +VI  + K E   +  ++ + +   +  E  + E+ +        +   
Sbjct: 233 DEYEIHAQFGQEVIKALLKTERGLIAYEDTKAECIKLFWEILMSEVNWLIYLFSEGRELP 292

Query: 59  GLNAPSCEQYMQFIAN---------------RRCHQI---GLEPLFKYTENPFPWMSEVI 100
           G+      Q++ F  N                R   +   G E  F   +NP P+M E +
Sbjct: 293 GVTLKKMVQWVLFNCNAAGTFTGHKDGITDEMRAEFLATTGFELEFP-DKNPLPYMVEYL 351

Query: 101 DL 102
           DL
Sbjct: 352 DL 353


>gi|283786769|ref|YP_003366634.1| ribonucleoside-diphosphate reductase 2 beta chain [Citrobacter
           rodentium ICC168]
 gi|282950223|emb|CBG89859.1| ribonucleoside-diphosphate reductase 2 beta chain [Citrobacter
           rodentium ICC168]
          Length = 319

 Score = 42.7 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   + P    ++ +  +  +L E    E+ Y  E       G 
Sbjct: 189 IRDEAVHGYYIGYKYQKGMEKLPDAAREDLKNFALDLLMELYDNEVRYTEELYAD--TG- 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
           +A   + ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 246 HAEDVQAFLCYNANKAMMNLGYEALFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|323359290|ref|YP_004225686.1| ribonucleotide reductase, beta subunit [Microbacterium testaceum
           StLB037]
 gi|323275661|dbj|BAJ75806.1| ribonucleotide reductase, beta subunit [Microbacterium testaceum
           StLB037]
          Length = 324

 Score = 42.7 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 52/130 (40%), Gaps = 8/130 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +           + +  + ++L+E    E+ Y         VGL
Sbjct: 194 IRDEAVHGYYIGYKFQRGLETVDQARRDDIKDYTFSLLYELYDNEVGYTQSLY--DAVGL 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKN--FFETRVTEYQ 117
           +    ++++ + AN+    +G E +F  +  N  P +   +    ++N  FF    + Y 
Sbjct: 252 S-EDVKKFLHYNANKALMNLGYEAMFPSSVTNVNPAILSALSPNADENHDFFSGSGSSYV 310

Query: 118 --QGAELKWD 125
             +    + D
Sbjct: 311 IGKAEATEDD 320


>gi|148543559|ref|YP_001270929.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           reuteri DSM 20016]
 gi|184152966|ref|YP_001841307.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           reuteri JCM 1112]
 gi|227363481|ref|ZP_03847603.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           reuteri MM2-3]
 gi|325681909|ref|ZP_08161427.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           reuteri MM4-1A]
 gi|148530593|gb|ABQ82592.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Lactobacillus reuteri DSM 20016]
 gi|183224310|dbj|BAG24827.1| ribonucleotide diphosphate reductase beta subunit [Lactobacillus
           reuteri JCM 1112]
 gi|227071495|gb|EEI09796.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           reuteri MM2-3]
 gi|324978553|gb|EGC15502.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           reuteri MM4-1A]
          Length = 339

 Score = 42.7 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 47/125 (37%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          +      ++ +      L+E    E  Y H       VG 
Sbjct: 197 LRDESVHGTYIGYKFQVGLRDRTEKQQQDMKDWMYNFLYELYDNEEKYTHLLY--DQVGW 254

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTE-Y 116
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF   V   Y
Sbjct: 255 T-DDVLTFIRYNANKALMNLGQDPLFPDTASDVNPVV-MNGISTSTSNHDFFSQ-VGNGY 311

Query: 117 QQGAE 121
           + GA 
Sbjct: 312 RMGAV 316


>gi|227510692|ref|ZP_03940741.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           brevis subsp. gravesensis ATCC 27305]
 gi|227513708|ref|ZP_03943757.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           buchneri ATCC 11577]
 gi|227522501|ref|ZP_03952550.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           hilgardii ATCC 8290]
 gi|227083027|gb|EEI18339.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           buchneri ATCC 11577]
 gi|227090323|gb|EEI25635.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           hilgardii ATCC 8290]
 gi|227189813|gb|EEI69880.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           brevis subsp. gravesensis ATCC 27305]
          Length = 318

 Score = 42.7 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          + P    ++ +     +L++    E  Y H        G 
Sbjct: 189 LRDESVHGTYIGYKFQIGFNQLPKTKQEDLKNWLYDLLYKLYANEEKYTHLLY--DQTGW 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 247 T-DDVLVFIRYNANKALMNLGQDPLFPDTAEDVNPVV-MNGISTSTANHDFF 296


>gi|312965591|ref|ZP_07779821.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli 2362-75]
 gi|312289740|gb|EFR17630.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli 2362-75]
          Length = 319

 Score = 42.7 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISQAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP     +S   D     +FF +  + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSSSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|259502687|ref|ZP_05745589.1| ribonucleoside-diphosphate reductase 2 [Lactobacillus antri DSM
           16041]
 gi|259169332|gb|EEW53827.1| ribonucleoside-diphosphate reductase 2 [Lactobacillus antri DSM
           16041]
          Length = 339

 Score = 42.7 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E      ++ +      L+E    E  Y H    K  +G 
Sbjct: 197 LRDESVHGTYVGYKFQVGLHERTEKQQQDMKDWMYNFLYELYDNEEKYTHLLYDK--IGW 254

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 255 T-DDVLTFIRYNANKALMNLGQDPLFPDTATDVNPVV-MNGISTSTSNHDFF 304


>gi|294669615|ref|ZP_06734682.1| hypothetical protein NEIELOOT_01516 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308528|gb|EFE49771.1| hypothetical protein NEIELOOT_01516 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 296

 Score = 42.7 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 4/49 (8%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEI 46
           RDE+LHL     ++N ++  +++P +     E Q +   +  +A   E 
Sbjct: 237 RDEALHLTSTQHMLNLMRAGVDDPEMAEIAVELQDECFKLFKKAAEQEK 285


>gi|306812443|ref|ZP_07446641.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           NC101]
 gi|222034376|emb|CAP77117.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli LF82]
 gi|305854481|gb|EFM54919.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           NC101]
 gi|312947211|gb|ADR28038.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O83:H1 str. NRG 857C]
          Length = 319

 Score = 42.7 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQARREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            +   + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -SDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|71034151|ref|XP_766717.1| ribonucleotide-diphosphate reductase small subunit [Theileria parva
           strain Muguga]
 gi|68353674|gb|EAN34434.1| ribonucleotide-diphosphate reductase small subunit, putative
           [Theileria parva]
          Length = 326

 Score = 42.7 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 30/87 (34%), Gaps = 10/87 (11%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP---KGFVG 59
           D  +H  F       ++        K  +     ++ EA  LE  +A++ +P        
Sbjct: 208 DRHIHTRFAHCTFTLLQH-------KMLESDVVQLIKEALKLEYDFANKFLPLSLMAITQ 260

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLF 86
           +       YM+++ N      G   L+
Sbjct: 261 MLTDVLRGYMEWVGNNVLMVCGYRTLY 287


>gi|218547807|ref|YP_002381598.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia
           fergusonii ATCC 35469]
 gi|218355348|emb|CAQ87955.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia fergusonii ATCC 35469]
          Length = 319

 Score = 42.7 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISLAQREELKSFAFDLLLELYDNELQYTDELYAETTW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|194468106|ref|ZP_03074092.1| Ribonucleoside-diphosphate reductase [Lactobacillus reuteri 100-23]
 gi|194452959|gb|EDX41857.1| Ribonucleoside-diphosphate reductase [Lactobacillus reuteri 100-23]
          Length = 339

 Score = 42.7 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 47/125 (37%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          +      ++ +      L+E    E  Y H       VG 
Sbjct: 197 LRDESVHGTYIGYKFQVGLRDRTEKQQQDMKDWMYNFLYELYDNEEKYTHLLY--DQVGW 254

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTE-Y 116
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF   V   Y
Sbjct: 255 T-DDVLTFIRYNANKALMNLGQDPLFPDTASDVNPVV-MNGISTSTSNHDFFSQ-VGNGY 311

Query: 117 QQGAE 121
           + GA 
Sbjct: 312 RMGAV 316


>gi|293556439|ref|ZP_06675017.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1039]
 gi|291601403|gb|EFF31677.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1039]
          Length = 316

 Score = 42.7 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 47/126 (37%), Gaps = 10/126 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +      Q   E       EF     T L+E    E AY  E   +  +GL
Sbjct: 186 IRDESVHGTYLGYKFRQDFEELTLEEKDEFTNWMYTFLNELLKNEFAYTEEVYSE--IGL 243

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT----ENPFPWMSEVIDLKKEK-NFFETRVTE 115
                + ++++ AN+    +G    F+       NP   +   I ++    +FF      
Sbjct: 244 -VEDIKTFVKYNANKSLQNMGFGIYFEDALVNDVNPI--VMNGISIETANHDFFSQVGAG 300

Query: 116 YQQGAE 121
           Y  G  
Sbjct: 301 YLMGGA 306


>gi|238796650|ref|ZP_04640156.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           mollaretii ATCC 43969]
 gi|238719381|gb|EEQ11191.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           mollaretii ATCC 43969]
          Length = 323

 Score = 42.7 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 54/136 (39%), Gaps = 17/136 (12%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +  +   +E +  +  +L +    E+ Y  +   K  VG 
Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKVDNNRRQEIKNFAFDLLQDLYDNEVRYTEDLYDK--VGW 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
                ++++ + AN+    +G E LF  ++     +S  I      +  +  +FF    +
Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPSSQAA---VSPAILAALSPNADENHDFFSGSGS 306

Query: 115 EYQQGAEL-----KWD 125
            Y  G  +      WD
Sbjct: 307 SYVIGKAVNTEDEDWD 322


>gi|227545165|ref|ZP_03975214.1| ribonucleoside-diphosphate reductase [Lactobacillus reuteri
           CF48-3A]
 gi|300909160|ref|ZP_07126621.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           reuteri SD2112]
 gi|227184848|gb|EEI64919.1| ribonucleoside-diphosphate reductase [Lactobacillus reuteri
           CF48-3A]
 gi|300893025|gb|EFK86384.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           reuteri SD2112]
          Length = 339

 Score = 42.3 bits (99), Expect = 0.020,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 47/125 (37%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          +      ++ +      L+E    E  Y H       VG 
Sbjct: 197 LRDESVHGTYIGYKFQVGLRDRTEKQQQDMKDWMYNFLYELYDNEEKYTHLLY--DQVGW 254

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTE-Y 116
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF   V   Y
Sbjct: 255 T-DDVLTFIRYNANKALMNLGQDPLFPDTASDVNPVV-MNGISTSTSNHDFFSQ-VGNGY 311

Query: 117 QQGAE 121
           + GA 
Sbjct: 312 RMGAV 316


>gi|296111477|ref|YP_003621859.1| ribonucleotide-diphosphate reductase beta subunit [Leuconostoc
           kimchii IMSNU 11154]
 gi|295833009|gb|ADG40890.1| ribonucleotide-diphosphate reductase beta subunit [Leuconostoc
           kimchii IMSNU 11154]
          Length = 325

 Score = 42.3 bits (99), Expect = 0.020,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 3/87 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          + P    +  Q     +L+E    E  Y HE      +G 
Sbjct: 193 IRDESVHGTYIGYKFQIGFNKLPLAEQESLQSWMYDLLYELYENEEKYTHELYDD--LGW 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK 87
           +      ++++ AN+    +G EP+F 
Sbjct: 251 S-EQVLTFLRYNANKALMNLGQEPMFP 276


>gi|238784826|ref|ZP_04628827.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           bercovieri ATCC 43970]
 gi|238714242|gb|EEQ06253.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           bercovieri ATCC 43970]
          Length = 323

 Score = 42.3 bits (99), Expect = 0.020,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 53/136 (38%), Gaps = 17/136 (12%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +      +   +E +  +  +L +    E+ Y  +   K  VG 
Sbjct: 193 IRDEAVHGYYIGYKFQKGLERVDNSRRQEIKNFAFDLLQDLYDNEVRYTEDLYDK--VGW 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
                ++++ + AN+    +G E LF  ++     +S  I      +  +  +FF    +
Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPASQAA---VSPAILAALSPNADENHDFFSGSGS 306

Query: 115 EYQQGAEL-----KWD 125
            Y  G  +      WD
Sbjct: 307 SYVIGKAVNTEDEDWD 322


>gi|22125124|ref|NP_668547.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           KIM 10]
 gi|45442235|ref|NP_993774.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           biovar Microtus str. 91001]
 gi|51597273|ref|YP_071464.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis IP 32953]
 gi|108808370|ref|YP_652286.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Antiqua]
 gi|108811297|ref|YP_647064.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Nepal516]
 gi|145598906|ref|YP_001162982.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Pestoides F]
 gi|149365457|ref|ZP_01887492.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis
           CA88-4125]
 gi|162420024|ref|YP_001607865.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Angola]
 gi|165925252|ref|ZP_02221084.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165939901|ref|ZP_02228439.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166008124|ref|ZP_02229022.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166212554|ref|ZP_02238589.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167398943|ref|ZP_02304467.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167421281|ref|ZP_02313034.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167423716|ref|ZP_02315469.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167468720|ref|ZP_02333424.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           FV-1]
 gi|170023362|ref|YP_001719867.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis YPIII]
 gi|186896377|ref|YP_001873489.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis PB1/+]
 gi|218929725|ref|YP_002347600.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           CO92]
 gi|229838202|ref|ZP_04458361.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229895452|ref|ZP_04510624.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Yersinia pestis Pestoides A]
 gi|229898686|ref|ZP_04513831.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229901543|ref|ZP_04516665.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis
           Nepal516]
 gi|270489729|ref|ZP_06206803.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           KIM D27]
 gi|294504447|ref|YP_003568509.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           Z176003]
 gi|21957983|gb|AAM84798.1|AE013726_1 ribonucleoside-diphosphate reductase 2, beta chain, frag [Yersinia
           pestis KIM 10]
 gi|45437099|gb|AAS62651.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis
           biovar Microtus str. 91001]
 gi|51590555|emb|CAH22196.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia
           pseudotuberculosis IP 32953]
 gi|108774945|gb|ABG17464.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Yersinia pestis Nepal516]
 gi|108780283|gb|ABG14341.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Yersinia pestis Antiqua]
 gi|115348336|emb|CAL21269.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis
           CO92]
 gi|145210602|gb|ABP40009.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Yersinia pestis Pestoides F]
 gi|149291870|gb|EDM41944.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis
           CA88-4125]
 gi|162352839|gb|ABX86787.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           Angola]
 gi|165912120|gb|EDR30759.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165922859|gb|EDR40010.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165992506|gb|EDR44807.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166206485|gb|EDR50965.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166960770|gb|EDR56791.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167051447|gb|EDR62855.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167057886|gb|EDR67632.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169749896|gb|ACA67414.1| Ribonucleoside-diphosphate reductase [Yersinia pseudotuberculosis
           YPIII]
 gi|186699403|gb|ACC90032.1| ribonucleotide reductase [Yersinia pseudotuberculosis PB1/+]
 gi|229681472|gb|EEO77566.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis
           Nepal516]
 gi|229688234|gb|EEO80305.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229694568|gb|EEO84615.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229701607|gb|EEO89634.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Yersinia pestis Pestoides A]
 gi|262362562|gb|ACY59283.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           D106004]
 gi|262366433|gb|ACY62990.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           D182038]
 gi|270338233|gb|EFA49010.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           KIM D27]
 gi|294354906|gb|ADE65247.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           Z176003]
 gi|320016142|gb|ADV99713.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 323

 Score = 42.3 bits (99), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 52/136 (38%), Gaps = 17/136 (12%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L +    E+ Y  +      VG 
Sbjct: 193 IRDEAVHGYYIGYKFQKGLGKIDSAHRQEIKNFAFDLLQDLYDNEVRYTEDLY--DHVGW 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
                ++++ + AN+    +G E LF  ++     +S  I      +  +  +FF    +
Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPASQAA---VSPAILAALSPNADENHDFFSGSGS 306

Query: 115 EYQQGAEL-----KWD 125
            Y  G  +      WD
Sbjct: 307 SYVIGKAVNTEDEDWD 322


>gi|307625752|gb|ADN70056.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           UM146]
          Length = 319

 Score = 42.3 bits (99), Expect = 0.021,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      + + +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNQEKISQAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            +   + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -SDDVKAFLCYNANKVLMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|91212037|ref|YP_542023.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           UTI89]
 gi|117624912|ref|YP_853853.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           APEC O1]
 gi|218559668|ref|YP_002392581.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           S88]
 gi|237706702|ref|ZP_04537183.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           3_2_53FAA]
 gi|91073611|gb|ABE08492.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli
           UTI89]
 gi|115514036|gb|ABJ02111.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli
           APEC O1]
 gi|218366437|emb|CAR04189.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli S88]
 gi|226899742|gb|EEH86001.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           3_2_53FAA]
 gi|294492274|gb|ADE91030.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli IHE3034]
 gi|315284934|gb|EFU44379.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 110-3]
 gi|323951102|gb|EGB46978.1| ribonucleotide reductase [Escherichia coli H252]
 gi|323957111|gb|EGB52836.1| ribonucleotide reductase [Escherichia coli H263]
          Length = 319

 Score = 42.3 bits (99), Expect = 0.021,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      + + +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNQEKISQAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            +   + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -SDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|197284313|ref|YP_002150185.1| ribonucleotide-diphosphate reductase subunit beta [Proteus
           mirabilis HI4320]
 gi|194681800|emb|CAR41036.1| ribonucleoside-diphosphate reductase beta chain [Proteus mirabilis
           HI4320]
          Length = 322

 Score = 42.3 bits (99), Expect = 0.021,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 51/133 (38%), Gaps = 11/133 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +         +    L  +  +  + ++L +    E+ Y  +      VG 
Sbjct: 192 IRDEAVHGYYIGYKFQNQLLNKSSLEKQNIKDFAFSLLLDLYDNEVKYTEDLY--DSVGW 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVI--DLKKEKNFFETRVTEYQ 117
                ++++ + AN+    +G E LF     N  P +   +  D  +  +FF    + Y 
Sbjct: 250 T-EDVKKFLHYNANKALMNLGYEALFPDEITNVSPAILSSLSPDANENHDFFSGSGSSYV 308

Query: 118 QGAEL-----KWD 125
            G  +      WD
Sbjct: 309 IGKTINTEDDDWD 321


>gi|199598384|ref|ZP_03211803.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           rhamnosus HN001]
 gi|199590703|gb|EDY98790.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           rhamnosus HN001]
          Length = 326

 Score = 42.3 bits (99), Expect = 0.022,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    ++ Q     +L++    E  Y ++   K     
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPAAEQQQLQDWMYDLLYDLYENEEKYTNDLYAKTKW-- 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G E  F  T    NP   M+ +       +FF
Sbjct: 246 -TDEVLTFLRYNANKALMNLGQETAFPDTADDVNPIV-MNGISTSTANHDFF 295


>gi|227529511|ref|ZP_03959560.1| ribonucleoside-diphosphate reductase [Lactobacillus vaginalis ATCC
           49540]
 gi|227350596|gb|EEJ40887.1| ribonucleoside-diphosphate reductase [Lactobacillus vaginalis ATCC
           49540]
          Length = 339

 Score = 42.3 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 6/95 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          +      ++ +      L+E    E  Y H       VG 
Sbjct: 197 LRDESVHGTYIGYKFQVGMHDRTEKQQQDMKDWMYNFLYELYDNEEKYTHLLY--DQVGW 254

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP 92
                  ++++ AN+    +G +PLF  T    NP
Sbjct: 255 T-EDVLTFIRYNANKALMNLGQDPLFPDTASDVNP 288


>gi|324111310|gb|EGC05292.1| ribonucleotide reductase [Escherichia fergusonii B253]
          Length = 319

 Score = 42.3 bits (99), Expect = 0.024,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISLAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|330718304|ref|ZP_08312904.1| ribonucleotide-diphosphate reductase subunit beta [Leuconostoc
           fallax KCTC 3537]
          Length = 326

 Score = 42.3 bits (99), Expect = 0.024,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 33/87 (37%), Gaps = 3/87 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          +       E Q     +L E    E  + HE      +G 
Sbjct: 192 IRDESVHGTYIGYKFQIGFNQLSEDEQSELQSWMYDLLFELYENEEKFTHELY--DEIGW 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK 87
                  ++++ AN+    +G EP+F 
Sbjct: 250 TDSVM-TFLRYNANKALMNLGQEPMFP 275


>gi|331658787|ref|ZP_08359729.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA206]
 gi|315298701|gb|EFU57955.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 16-3]
 gi|331053369|gb|EGI25398.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA206]
          Length = 319

 Score = 42.3 bits (99), Expect = 0.025,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISLAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|325496274|gb|EGC94133.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia
           fergusonii ECD227]
          Length = 319

 Score = 42.3 bits (99), Expect = 0.025,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNLGKTSLEQREELKNFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|228904848|ref|ZP_04068902.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 4222]
 gi|228854862|gb|EEM99466.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 4222]
          Length = 343

 Score = 41.9 bits (98), Expect = 0.026,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 49/130 (37%), Gaps = 22/130 (16%)

Query: 1   MRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET---M 53
           +RDE++H      F  ++      E      +E  +++  +L      E+ Y ++    +
Sbjct: 204 LRDEAIHGVTGGIFAQEIYENQLTE---AEQQEVDKEAIQLLEMLYANELDYTNDVYAPL 260

Query: 54  PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEK---NFF 109
            K  +        +++++ AN+    +G +  F     NP         L+ +    +FF
Sbjct: 261 GKDMI----EEVNKFLRYNANKAMMNLGYDQYFDDEYVNPI----VQNGLQTKTKQHDFF 312

Query: 110 ETRVTEYQQG 119
             +   Y + 
Sbjct: 313 SVKGNGYVKA 322


>gi|75758223|ref|ZP_00738348.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74494277|gb|EAO57368.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 342

 Score = 41.9 bits (98), Expect = 0.026,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 49/130 (37%), Gaps = 22/130 (16%)

Query: 1   MRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET---M 53
           +RDE++H      F  ++      E      +E  +++  +L      E+ Y ++    +
Sbjct: 203 LRDEAIHGVTGGIFAQEIYENQLTE---AEQQEVDKEAIQLLEMLYANELDYTNDVYAPL 259

Query: 54  PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEK---NFF 109
            K  +        +++++ AN+    +G +  F     NP         L+ +    +FF
Sbjct: 260 GKDMI----EEVNKFLRYNANKAMMNLGYDQYFDDEYVNPI----VQNGLQTKTKQHDFF 311

Query: 110 ETRVTEYQQG 119
             +   Y + 
Sbjct: 312 SVKGNGYVKA 321


>gi|326692188|ref|ZP_08229193.1| ribonucleotide-diphosphate reductase subunit beta [Leuconostoc
           argentinum KCTC 3773]
          Length = 325

 Score = 41.9 bits (98), Expect = 0.026,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          +       E Q     +L++    E  Y HE      +G 
Sbjct: 194 IRDESVHGTYIGYKFQIGFNQLSEDEQAELQAWMYDLLYDLYENEEKYTHELYDD--LGW 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G EP+F       NP   M+ +       +FF
Sbjct: 252 -YEQVMTFLRYNANKALMNLGQEPMFPDGAEDVNPVV-MNGLSTSTANHDFF 301


>gi|291284009|ref|YP_003500827.1| Ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli O55:H7 str. CB9615]
 gi|290763882|gb|ADD57843.1| Ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli O55:H7 str. CB9615]
          Length = 319

 Score = 41.9 bits (98), Expect = 0.027,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISPGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP   +   +    ++N  FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|320194816|gb|EFW69445.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           WV_060327]
          Length = 319

 Score = 41.9 bits (98), Expect = 0.027,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQEQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            +   + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -SDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|110642801|ref|YP_670531.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           536]
 gi|191171432|ref|ZP_03032981.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli F11]
 gi|300990601|ref|ZP_07179251.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 200-1]
 gi|110344393|gb|ABG70630.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli
           536]
 gi|190908366|gb|EDV67956.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli F11]
 gi|300305718|gb|EFJ60238.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 200-1]
 gi|324014406|gb|EGB83625.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 60-1]
          Length = 319

 Score = 41.9 bits (98), Expect = 0.027,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQEQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            +   + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -SDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|218701171|ref|YP_002408800.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           IAI39]
 gi|218371157|emb|CAR18988.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli IAI39]
          Length = 319

 Score = 41.9 bits (98), Expect = 0.027,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISLAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP   +   +    ++N  FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|300173988|ref|YP_003773154.1| ribonucleoside-diphosphate reductase subunit beta [Leuconostoc
           gasicomitatum LMG 18811]
 gi|299888367|emb|CBL92335.1| ribonucleoside-diphosphate reductase, beta subunit [Leuconostoc
           gasicomitatum LMG 18811]
          Length = 325

 Score = 41.9 bits (98), Expect = 0.029,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 3/87 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          + P     E Q     +L+E    E  Y H+      +G 
Sbjct: 193 IRDESVHGTYIGYKFQIGFNQLPAEEKSELQSWMYDLLYELYENEEKYTHQLYDD--LGW 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK 87
                  ++++ AN+    +G EP+F 
Sbjct: 251 T-EQVLTFLRYNANKALMNLGQEPMFP 276


>gi|227505793|ref|ZP_03935842.1| ribonucleoside-diphosphate reductase [Corynebacterium striatum ATCC
           6940]
 gi|227197639|gb|EEI77687.1| ribonucleoside-diphosphate reductase [Corynebacterium striatum ATCC
           6940]
          Length = 318

 Score = 41.9 bits (98), Expect = 0.030,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 50/136 (36%), Gaps = 17/136 (12%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      Q   +      +  +     ++ +    EI Y  +      +G 
Sbjct: 188 IRDEAVHGYYIGYKYQQAVKQLNPAQQQGLKDSVFDLVFDLYDNEITYTEKIY--DALGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
                ++++++ AN+  + +G E LF   E     +   I      D  +  +FF    +
Sbjct: 246 T-EDVKRFLRYNANKALNNLGYEGLFPSDECR---VDPAILSSLAPDANETHDFFSGSGS 301

Query: 115 EYQQGAELK-----WD 125
            Y  G   +     WD
Sbjct: 302 SYVIGKAEETQDDDWD 317


>gi|323966928|gb|EGB62356.1| ribonucleotide reductase [Escherichia coli M863]
 gi|327251394|gb|EGE63080.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli STEC_7v]
          Length = 319

 Score = 41.9 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISMAQREELKSFAFDLLLELYDNELQYTDELYAETTW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|270265355|ref|ZP_06193616.1| ribonucleoside-diphosphate reductase 2 subunit beta [Serratia
           odorifera 4Rx13]
 gi|270040759|gb|EFA13862.1| ribonucleoside-diphosphate reductase 2 subunit beta [Serratia
           odorifera 4Rx13]
          Length = 323

 Score = 41.9 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 49/135 (36%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      ++ +  +  +L +    E+ Y  E      VG 
Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKVDATRRQQVKNFAFDLLQDLYDNEVRYTEELY--DGVGW 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115
                + ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 251 T-EDVKTFLHYNANKALMNLGYEALFPPAMAEVNPAILSALSPNADENH--DFFSGSGSS 307

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 308 YVIGKAVNTEDEDWD 322


>gi|213966196|ref|ZP_03394381.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           amycolatum SK46]
 gi|213951131|gb|EEB62528.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           amycolatum SK46]
          Length = 334

 Score = 41.9 bits (98), Expect = 0.032,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 50/136 (36%), Gaps = 17/136 (12%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RD+++H  +      +          ++ +     +L E   LE+ Y+        +GL
Sbjct: 204 LRDKAVHGYYSGYKFQRGVETYDTATQRQMKAFVFELLDELYQLELRYSEALY--QPLGL 261

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
                  ++++ AN+    +G    F + E  F    E++        +   +FF    +
Sbjct: 262 -YDDVANFIRYNANKALMNLGYPQRFNHDETAFK--PEILAALTPGSDENH-DFFSGSGS 317

Query: 115 EYQQG-----AELKWD 125
            Y  G     A+  WD
Sbjct: 318 AYVIGKAEDTADEDWD 333


>gi|81428551|ref|YP_395551.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           sakei subsp. sakei 23K]
 gi|78610193|emb|CAI55242.1| Ribonucleoside-diphosphate reductase, beta chain [Lactobacillus
           sakei subsp. sakei 23K]
          Length = 318

 Score = 41.9 bits (98), Expect = 0.032,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 35/95 (36%), Gaps = 6/95 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E      +E Q     +L++    E  Y HE       G 
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELAKAEQEELQNWMYDLLYDLYANEEKYTHEVY--DGTGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP 92
                  Y+++ AN+    +G   LF  T    NP
Sbjct: 246 T-EEVLTYLRYNANKALMNLGQGALFPDTAEDVNP 279


>gi|170684037|ref|YP_001744827.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           SMS-3-5]
 gi|170521755|gb|ACB19933.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli SMS-3-5]
          Length = 319

 Score = 41.9 bits (98), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKKLEKISLAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            +   + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -SDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|116333244|ref|YP_794771.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           brevis ATCC 367]
 gi|116098591|gb|ABJ63740.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Lactobacillus brevis ATCC 367]
          Length = 331

 Score = 41.9 bits (98), Expect = 0.032,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 3/89 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E      ++ +      L++    E  Y H       +G 
Sbjct: 191 LRDESVHGTYIGYKFQLGMKELTDAEQQQMKDWMYDFLYQLYDNEEKYTHTLY--DQIGW 248

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT 89
                  ++++ AN+    +G +PLF  T
Sbjct: 249 T-EKVLTFIRYNANKALMNLGQDPLFPDT 276


>gi|293412034|ref|ZP_06654757.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
 gi|291468805|gb|EFF11296.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
          Length = 319

 Score = 41.9 bits (98), Expect = 0.032,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|157371959|ref|YP_001479948.1| ribonucleotide-diphosphate reductase subunit beta [Serratia
           proteamaculans 568]
 gi|157323723|gb|ABV42820.1| Ribonucleoside-diphosphate reductase [Serratia proteamaculans 568]
          Length = 323

 Score = 41.9 bits (98), Expect = 0.032,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 50/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      ++ +  +  +L +    E+ Y  E      VG 
Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKVDAARRQQVKNFAFDLLQDLYDNEVRYTEELY--DGVGW 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115
                + ++ + AN+    +G E LF  +    NP     +S   D     +FF    + 
Sbjct: 251 T-EDVKTFLHYNANKALMNLGYEALFPPSMAEVNPAILSALSPNADENH--DFFSGSGSS 307

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 308 YVIGKAVNTEDDDWD 322


>gi|332638431|ref|ZP_08417294.1| ribonucleotide-diphosphate reductase subunit beta [Weissella
           cibaria KACC 11862]
          Length = 320

 Score = 41.6 bits (97), Expect = 0.033,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 40/112 (35%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E       E +     +L +    E  Y         +G 
Sbjct: 188 LRDESVHGTYIGYKFQLGFNELTEDQQSEMKMWMYDLLLDLYNNEEQYTKHLY--DGIGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFF 109
              S   ++++ AN+    +G +PLF       NP   M+ +       +FF
Sbjct: 246 T-ESVLTFLRYNANKALMNLGQDPLFPDGAEDVNPIV-MNGISTTTSNHDFF 295


>gi|256848140|ref|ZP_05553584.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           coleohominis 101-4-CHN]
 gi|256715200|gb|EEU30177.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           coleohominis 101-4-CHN]
          Length = 333

 Score = 41.6 bits (97), Expect = 0.033,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          +      ++ +      L+E    E  Y H       +G 
Sbjct: 191 LRDESVHGTYIGYKFQVGMRQLTEKQQQDMKDWMYNFLYELYDNEGNYTHLLY--DQIGW 248

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 249 T-DDVLTFIRYNANKALMNLGQDPLFPDTASDVNPVV-MNGISTTTSNHDFF 298


>gi|191167101|ref|ZP_03028922.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B7A]
 gi|260856787|ref|YP_003230678.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia
           coli O26:H11 str. 11368]
 gi|309795135|ref|ZP_07689554.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 145-7]
 gi|331664233|ref|ZP_08365139.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA143]
 gi|190902883|gb|EDV62611.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B7A]
 gi|257755436|dbj|BAI26938.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia
           coli O26:H11 str. 11368]
 gi|308121106|gb|EFO58368.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 145-7]
 gi|323154887|gb|EFZ41079.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli EPECa14]
 gi|331058164|gb|EGI30145.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA143]
          Length = 319

 Score = 41.6 bits (97), Expect = 0.033,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP   +   +    ++N  FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|323941488|gb|EGB37671.1| ribonucleotide reductase [Escherichia coli E482]
          Length = 319

 Score = 41.6 bits (97), Expect = 0.034,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|15803196|ref|NP_289228.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 EDL933]
 gi|15832793|ref|NP_311566.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. Sakai]
 gi|168750919|ref|ZP_02775941.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4113]
 gi|168755421|ref|ZP_02780428.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4401]
 gi|168762471|ref|ZP_02787478.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4501]
 gi|168768767|ref|ZP_02793774.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4486]
 gi|168774792|ref|ZP_02799799.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4196]
 gi|168778658|ref|ZP_02803665.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4076]
 gi|168787931|ref|ZP_02812938.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC869]
 gi|168800561|ref|ZP_02825568.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC508]
 gi|195938430|ref|ZP_03083812.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. EC4024]
 gi|208808703|ref|ZP_03251040.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4206]
 gi|208813382|ref|ZP_03254711.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4045]
 gi|208819985|ref|ZP_03260305.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4042]
 gi|209400851|ref|YP_002272142.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4115]
 gi|217327155|ref|ZP_03443238.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. TW14588]
 gi|254794623|ref|YP_003079460.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. TW14359]
 gi|261225973|ref|ZP_05940254.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256769|ref|ZP_05949302.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Escherichia coli O157:H7 str. FRIK966]
 gi|12517115|gb|AAG57786.1|AE005496_9 ribonucleoside-diphosphate reductase 2, beta chain [Escherichia
           coli O157:H7 str. EDL933]
 gi|13363010|dbj|BAB36962.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli
           O157:H7 str. Sakai]
 gi|187769524|gb|EDU33368.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4196]
 gi|188015002|gb|EDU53124.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4113]
 gi|189003218|gb|EDU72204.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4076]
 gi|189357305|gb|EDU75724.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4401]
 gi|189362069|gb|EDU80488.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4486]
 gi|189367242|gb|EDU85658.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4501]
 gi|189372097|gb|EDU90513.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC869]
 gi|189377142|gb|EDU95558.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC508]
 gi|208728504|gb|EDZ78105.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4206]
 gi|208734659|gb|EDZ83346.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4045]
 gi|208740108|gb|EDZ87790.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4042]
 gi|209162251|gb|ACI39684.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4115]
 gi|209762240|gb|ACI79432.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia
           coli]
 gi|209762242|gb|ACI79433.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia
           coli]
 gi|209762246|gb|ACI79435.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia
           coli]
 gi|217319522|gb|EEC27947.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. TW14588]
 gi|254594023|gb|ACT73384.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Escherichia coli O157:H7 str. TW14359]
 gi|320189007|gb|EFW63666.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. EC1212]
 gi|320640665|gb|EFX10201.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. G5101]
 gi|326338609|gb|EGD62435.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. 1044]
 gi|326342863|gb|EGD66631.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. 1125]
          Length = 319

 Score = 41.6 bits (97), Expect = 0.034,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|16130590|ref|NP_417162.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. MG1655]
 gi|74313247|ref|YP_311666.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sonnei
           Ss046]
 gi|89109469|ref|AP_003249.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli str. K-12 substr. W3110]
 gi|157162127|ref|YP_001459445.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           HS]
 gi|170019072|ref|YP_001724026.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           ATCC 8739]
 gi|170082262|ref|YP_001731582.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. DH10B]
 gi|188492563|ref|ZP_02999833.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 53638]
 gi|193065983|ref|ZP_03047042.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E22]
 gi|193070996|ref|ZP_03051924.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E110019]
 gi|194427830|ref|ZP_03060376.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B171]
 gi|194439440|ref|ZP_03071516.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 101-1]
 gi|209920120|ref|YP_002294204.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           SE11]
 gi|218696273|ref|YP_002403940.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           55989]
 gi|238901820|ref|YP_002927616.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Escherichia coli BW2952]
 gi|256019542|ref|ZP_05433407.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9]
 gi|256024812|ref|ZP_05438677.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           4_1_40B]
 gi|260845324|ref|YP_003223102.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia
           coli O103:H2 str. 12009]
 gi|293448994|ref|ZP_06663415.1| ribonucleoside-diphosphate reductase [Escherichia coli B088]
 gi|300906827|ref|ZP_07124508.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 84-1]
 gi|300916824|ref|ZP_07133528.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 115-1]
 gi|300922750|ref|ZP_07138839.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 182-1]
 gi|300930529|ref|ZP_07145925.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 187-1]
 gi|300949072|ref|ZP_07163119.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 116-1]
 gi|300957447|ref|ZP_07169660.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 175-1]
 gi|301026690|ref|ZP_07190101.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 196-1]
 gi|301306007|ref|ZP_07212087.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 124-1]
 gi|301327384|ref|ZP_07220633.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 78-1]
 gi|301645345|ref|ZP_07245292.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 146-1]
 gi|307139368|ref|ZP_07498724.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           H736]
 gi|307314435|ref|ZP_07594040.1| Ribonucleoside-diphosphate reductase [Escherichia coli W]
 gi|312973113|ref|ZP_07787286.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli 1827-70]
 gi|331643364|ref|ZP_08344495.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H736]
 gi|331669414|ref|ZP_08370260.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA271]
 gi|331678654|ref|ZP_08379328.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H591]
 gi|332280666|ref|ZP_08393079.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9]
 gi|2507306|sp|P37146|RIR4_ECOLI RecName: Full=Ribonucleoside-diphosphate reductase 2 subunit beta;
           AltName: Full=R2F protein; AltName: Full=Ribonucleotide
           reductase 2
 gi|303325061|pdb|3N37|A Chain A, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From
           Escherichia Coli
 gi|303325062|pdb|3N38|A Chain A, Ribonucleotide Reductase Nrdf From Escherichia Coli Soaked
           With Ferrous Ions
 gi|303325063|pdb|3N39|B Chain B, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From
           Escherichia Coli In Complex With Nrdi
 gi|303325065|pdb|3N39|A Chain A, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From
           Escherichia Coli In Complex With Nrdi
 gi|303325067|pdb|3N3A|B Chain B, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From
           Escherichia Coli In Complex With Reduced Nrdi
 gi|303325069|pdb|3N3A|A Chain A, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From
           Escherichia Coli In Complex With Reduced Nrdi
 gi|303325071|pdb|3N3B|B Chain B, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From
           Escherichia Coli In Complex With Reduced Nrdi With A
           Trapped Peroxide
 gi|303325073|pdb|3N3B|A Chain A, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From
           Escherichia Coli In Complex With Reduced Nrdi With A
           Trapped Peroxide
 gi|1789031|gb|AAC75723.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. MG1655]
 gi|1800064|dbj|BAA16541.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli str. K12 substr. W3110]
 gi|73856724|gb|AAZ89431.1| ribonucleoside-diphosphate reductase 2, beta chain, frag [Shigella
           sonnei Ss046]
 gi|157067807|gb|ABV07062.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli HS]
 gi|169754000|gb|ACA76699.1| Ribonucleoside-diphosphate reductase [Escherichia coli ATCC 8739]
 gi|169890097|gb|ACB03804.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. DH10B]
 gi|188487762|gb|EDU62865.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 53638]
 gi|192926397|gb|EDV81032.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E22]
 gi|192955654|gb|EDV86129.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E110019]
 gi|194414063|gb|EDX30339.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B171]
 gi|194421616|gb|EDX37627.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 101-1]
 gi|209762244|gb|ACI79434.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia
           coli]
 gi|209913379|dbj|BAG78453.1| ribonucleoside-diphosphate reductase beta subunit [Escherichia coli
           SE11]
 gi|218353005|emb|CAU98821.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli 55989]
 gi|238863480|gb|ACR65478.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Escherichia coli BW2952]
 gi|257760471|dbj|BAI31968.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia
           coli O103:H2 str. 12009]
 gi|291322084|gb|EFE61513.1| ribonucleoside-diphosphate reductase [Escherichia coli B088]
 gi|299879612|gb|EFI87823.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 196-1]
 gi|300315803|gb|EFJ65587.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 175-1]
 gi|300401428|gb|EFJ84966.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 84-1]
 gi|300415890|gb|EFJ99200.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 115-1]
 gi|300420935|gb|EFK04246.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 182-1]
 gi|300451458|gb|EFK15078.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 116-1]
 gi|300461585|gb|EFK25078.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 187-1]
 gi|300838718|gb|EFK66478.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 124-1]
 gi|300846038|gb|EFK73798.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 78-1]
 gi|301076379|gb|EFK91185.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 146-1]
 gi|306906003|gb|EFN36524.1| Ribonucleoside-diphosphate reductase [Escherichia coli W]
 gi|309703041|emb|CBJ02373.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli
           ETEC H10407]
 gi|310333055|gb|EFQ00269.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli 1827-70]
 gi|315061957|gb|ADT76284.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli W]
 gi|315254452|gb|EFU34420.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 85-1]
 gi|315615063|gb|EFU95700.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli 3431]
 gi|320198428|gb|EFW73030.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           EC4100B]
 gi|320656721|gb|EFX24609.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O55:H7 str. 3256-97 TW 07815]
 gi|320662264|gb|EFX29661.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O55:H7 str. USDA 5905]
 gi|320667315|gb|EFX34273.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. LSU-61]
 gi|323173041|gb|EFZ58672.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli LT-68]
 gi|323183202|gb|EFZ68599.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli 1357]
 gi|323377462|gb|ADX49730.1| Ribonucleoside-diphosphate reductase [Escherichia coli KO11]
 gi|323935630|gb|EGB31947.1| ribonucleotide reductase [Escherichia coli E1520]
 gi|323946352|gb|EGB42381.1| ribonucleotide reductase [Escherichia coli H120]
 gi|323960578|gb|EGB56205.1| ribonucleotide reductase [Escherichia coli H489]
 gi|323971479|gb|EGB66714.1| ribonucleotide reductase [Escherichia coli TA007]
 gi|324020305|gb|EGB89524.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 117-3]
 gi|324120035|gb|EGC13912.1| ribonucleotide reductase [Escherichia coli E1167]
 gi|331036835|gb|EGI09059.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H736]
 gi|331063082|gb|EGI34995.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA271]
 gi|331073484|gb|EGI44805.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H591]
 gi|332103018|gb|EGJ06364.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9]
 gi|332344558|gb|AEE57892.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli UMNK88]
          Length = 319

 Score = 41.6 bits (97), Expect = 0.034,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|323159821|gb|EFZ45793.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli E128010]
          Length = 319

 Score = 41.6 bits (97), Expect = 0.034,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|218296962|ref|ZP_03497648.1| ribonucleotide reductase [Thermus aquaticus Y51MC23]
 gi|218242665|gb|EED09201.1| ribonucleotide reductase [Thermus aquaticus Y51MC23]
          Length = 323

 Score = 41.6 bits (97), Expect = 0.034,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 46/119 (38%), Gaps = 4/119 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVGLNA 62
           E++H  FG++++  ++ E P L+ + F ++      E    E A             +  
Sbjct: 194 ENIHGLFGVELLRLLREERPELFGEAFVEEVLRAAQELFRAEEALVDWIFAGGDTPWVRG 253

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQQ 118
               ++++   N+     GL   F+  +       W +  +   K+ +FF  R   Y +
Sbjct: 254 EEVLEFVKDRYNQVLALHGLPGPFQVRDEVLKDTAWFALELLADKDVDFFNKRSVAYAR 312


>gi|238790129|ref|ZP_04633906.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           frederiksenii ATCC 33641]
 gi|238721798|gb|EEQ13461.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           frederiksenii ATCC 33641]
          Length = 323

 Score = 41.6 bits (97), Expect = 0.034,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 50/129 (38%), Gaps = 12/129 (9%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +      +   +E +  +  +L +    E+ Y  +      VG 
Sbjct: 193 IRDEAVHGYYIGYKFQKGLERVDNNRRQEIKNFAFDLLQDLYDNEVRYTEDLYDD--VGW 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
                ++++ + AN+    +G E LF  ++     +S  I      +  +  +FF    +
Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPASQAA---VSPAILAALSPNADENHDFFSGSGS 306

Query: 115 EYQQGAELK 123
            Y  G  + 
Sbjct: 307 SYVIGKAVS 315


>gi|227502192|ref|ZP_03932241.1| ribonucleoside-diphosphate reductase [Corynebacterium accolens ATCC
           49725]
 gi|227077016|gb|EEI14979.1| ribonucleoside-diphosphate reductase [Corynebacterium accolens ATCC
           49725]
          Length = 337

 Score = 41.6 bits (97), Expect = 0.035,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 51/136 (37%), Gaps = 17/136 (12%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY-AHETMPKGFVG 59
           +RD+++H  +      +          +E ++ +  ++ +   LE+ Y      P G   
Sbjct: 207 LRDKAVHGYYSGYKFQRGLDHATEARREEMREFTFDLVRKLYDLEMRYSGELYEPYGL-- 264

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVT 114
                   ++++ AN+    +G   LF Y E   NP     ++   D     +FF    +
Sbjct: 265 --MDDVATFVRYNANKALMNLGYPNLFPYEECQVNPKILAALTPGSDENH--DFFSGSGS 320

Query: 115 EYQQG-----AELKWD 125
            Y  G     ++  WD
Sbjct: 321 SYIIGKAVETSDADWD 336


>gi|260869355|ref|YP_003235757.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia
           coli O111:H- str. 11128]
 gi|257765711|dbj|BAI37206.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia
           coli O111:H- str. 11128]
 gi|323180097|gb|EFZ65649.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli 1180]
          Length = 319

 Score = 41.6 bits (97), Expect = 0.035,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 51/128 (39%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y +E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTNELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP   +   +    ++N  FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|172041159|ref|YP_001800873.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           urealyticum DSM 7109]
 gi|171852463|emb|CAQ05439.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           urealyticum DSM 7109]
          Length = 331

 Score = 41.6 bits (97), Expect = 0.036,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 3/90 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +      +          +E +      L +    E+ Y         +G 
Sbjct: 201 IRDESVHGYYIGYKYQRALENESPERQEELKGFVVEQLLDLYDNEVEYTESIY--DEIGW 258

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90
                ++++++ AN+  + +G + LF   E
Sbjct: 259 T-EDVKRFLRYNANKAMNNLGYDGLFPVEE 287


>gi|23335914|ref|ZP_00121145.1| COG0208: Ribonucleotide reductase, beta subunit [Bifidobacterium
           longum DJO10A]
 gi|189440326|ref|YP_001955407.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           longum DJO10A]
 gi|189428761|gb|ACD98909.1| Ribonucleotide reductase beta subunit [Bifidobacterium longum
           DJO10A]
          Length = 330

 Score = 41.6 bits (97), Expect = 0.036,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 47/130 (36%), Gaps = 10/130 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +       + Q  +  +L+E    E+ Y      +  +  
Sbjct: 200 IRDEAVHGYYIGYKYQKGIAQLSDAERLDLQDYTYDLLNELYDNEVEYTQSLYDRVDL-- 257

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115
                E+++++  N+    +G   LF       NP     +S   D     +FF    + 
Sbjct: 258 -TDDVEKFLRYNGNKALMNLGYPALFPAEICDVNPAILAALSPNADENH--DFFSGSGSS 314

Query: 116 YQQGAELKWD 125
           Y  G   + D
Sbjct: 315 YVMGKAEETD 324


>gi|254037718|ref|ZP_04871776.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           1_1_43]
 gi|226839342|gb|EEH71363.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           1_1_43]
          Length = 319

 Score = 41.6 bits (97), Expect = 0.036,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|116494955|ref|YP_806689.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           casei ATCC 334]
 gi|191638466|ref|YP_001987632.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           casei BL23]
 gi|227535043|ref|ZP_03965092.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|239631445|ref|ZP_04674476.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|116105105|gb|ABJ70247.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Lactobacillus casei ATCC 334]
 gi|190712768|emb|CAQ66774.1| Ribonucleoside-diphosphate reductase, beta chain [Lactobacillus
           casei BL23]
 gi|227187358|gb|EEI67425.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|239525910|gb|EEQ64911.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|327382498|gb|AEA53974.1| hypothetical protein LC2W_1641 [Lactobacillus casei LC2W]
 gi|327385696|gb|AEA57170.1| hypothetical protein LCBD_1674 [Lactobacillus casei BD-II]
          Length = 326

 Score = 41.6 bits (97), Expect = 0.037,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 9/113 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    +  +     +L +    E  Y ++   K     
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEAEQQTLKDWMYDLLFDLYENEEKYTNDLYAKT---- 243

Query: 61  N-APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
           N       ++++ AN+    +G E  F  T    NP   M+ +       +FF
Sbjct: 244 NWTDEVLTFLRYNANKALMNLGQETAFPDTADDVNPIV-MNGISTSTANHDFF 295


>gi|301066519|ref|YP_003788542.1| ribonucleotide reductase subunit beta [Lactobacillus casei str.
           Zhang]
 gi|300438926|gb|ADK18692.1| Ribonucleotide reductase, beta subunit [Lactobacillus casei str.
           Zhang]
          Length = 326

 Score = 41.6 bits (97), Expect = 0.038,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 9/113 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E P    +  +     +L +    E  Y ++   K     
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEAEQQTLKDWMYDLLFDLYENEEKYTNDLYAKT---- 243

Query: 61  N-APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
           N       ++++ AN+    +G E  F  T    NP   M+ +       +FF
Sbjct: 244 NWTDEVLTFLRYNANKALMNLGQETAFPDTADDVNPIV-MNGISTSTANHDFF 295


>gi|330971158|gb|EGH71224.1| hypothetical protein PSYAR_11719 [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 25

 Score = 41.6 bits (97), Expect = 0.038,   Method: Composition-based stats.
 Identities = 17/21 (80%), Positives = 19/21 (90%)

Query: 90  ENPFPWMSEVIDLKKEKNFFE 110
            NPFPWMSE+I LKKE+NFFE
Sbjct: 1   TNPFPWMSEIIALKKERNFFE 21


>gi|311278369|ref|YP_003940600.1| Ribonucleoside-diphosphate reductase [Enterobacter cloacae SCF1]
 gi|308747564|gb|ADO47316.1| Ribonucleoside-diphosphate reductase [Enterobacter cloacae SCF1]
          Length = 320

 Score = 41.6 bits (97), Expect = 0.038,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 49/135 (36%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   + P    +  + ++  +L      E+AY          G 
Sbjct: 190 IRDEAVHGYYIGYKYQKGLEKIPPARREALRNEAVDLLMNLYENELAYTEALY--AQTGW 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 248 T-EEVKRFLCYNANKALMNLGYEALFPAEMADVNPAILAALSPNADENH--DFFSGSGSS 304

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 305 YVMGKTVGTHDEDWD 319


>gi|47200896|emb|CAF87761.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 441

 Score = 41.6 bits (97), Expect = 0.038,   Method: Composition-based stats.
 Identities = 6/23 (26%), Positives = 15/23 (65%)

Query: 52  TMPKGFVGLNAPSCEQYMQFIAN 74
            +P   +G+N    ++Y++F+A+
Sbjct: 419 ALPVKLIGMNCQLMKRYIEFVAD 441


>gi|320173468|gb|EFW48667.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           dysenteriae CDC 74-1112]
          Length = 319

 Score = 41.6 bits (97), Expect = 0.039,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKNFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|328553050|gb|AEB23542.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           amyloliquefaciens TA208]
          Length = 93

 Score = 41.6 bits (97), Expect = 0.039,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 7/87 (8%)

Query: 37  MLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPW 95
           ML E    E+ Y  +      VGL AP  ++++++ AN+  + +G +  F+  + NP   
Sbjct: 1   MLQELYENELEYTEDVY--DQVGL-APDVKKFIRYNANKALNNLGFDHWFEEEDVNPI-- 55

Query: 96  MSEVIDLKKEK-NFFETRVTEYQQGAE 121
           +   +  K +  +FF  +   Y++   
Sbjct: 56  VINGLSTKTKSHDFFSMKGVGYKKATV 82


>gi|323978713|gb|EGB73795.1| ribonucleotide reductase [Escherichia coli TW10509]
          Length = 319

 Score = 41.6 bits (97), Expect = 0.040,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISMAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP   +   +    ++N  FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|283835589|ref|ZP_06355330.1| ribonucleoside-diphosphate reductase, beta subunit [Citrobacter
           youngae ATCC 29220]
 gi|291068801|gb|EFE06910.1| ribonucleoside-diphosphate reductase, beta subunit [Citrobacter
           youngae ATCC 29220]
          Length = 319

 Score = 41.6 bits (97), Expect = 0.040,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 47/128 (36%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E  Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKGLAHISESAREELKNFALDLLMELYDNEAQYTDELYAETGW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115
            A   + ++ + AN+    +G E LF       NP   +   +    E+N  FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEALFPPEMAEVNPA--ILAALSPNAEENHDFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|152964774|ref|YP_001360558.1| ribonucleotide-diphosphate reductase subunit beta [Kineococcus
           radiotolerans SRS30216]
 gi|151359291|gb|ABS02294.1| Ribonucleoside-diphosphate reductase [Kineococcus radiotolerans
           SRS30216]
          Length = 323

 Score = 41.6 bits (97), Expect = 0.040,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 45/128 (35%), Gaps = 12/128 (9%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +           E +  +  +L+E    E  Y  +      VGL
Sbjct: 193 IRDEAVHGYYIGYKFQRGLELVDQAKRDEIKDYAFELLYELYDNECKYTADLY--DGVGL 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
                + ++ + AN+    +G E +F         +   I      +  +  +FF    +
Sbjct: 251 T-EDVKTFLHYNANKALMNLGYEGMFPSD---MTKVDPSILSALSPNADENHDFFSGSGS 306

Query: 115 EYQQGAEL 122
            Y  G  +
Sbjct: 307 SYVIGKAV 314


>gi|260448266|gb|ACX38688.1| Ribonucleoside-diphosphate reductase [Escherichia coli DH1]
 gi|315137289|dbj|BAJ44448.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           DH1]
          Length = 319

 Score = 41.6 bits (97), Expect = 0.041,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKIFLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|85726187|gb|ABC79616.1| ribonucleotide reductase beta subunit [Borrelia hermsii DAH]
          Length = 321

 Score = 41.6 bits (97), Expect = 0.041,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 50/122 (40%), Gaps = 9/122 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  +   +         Q+++  +L     LE AY  +      +GL
Sbjct: 192 LRDESVHGVFVGLLAQEEFNKMTFKEQAFAQREATLILERLYYLESAYTKDLYSS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEY 116
                + ++++ A++    +G +  F   +   NP   +   +    +  +FF T+   Y
Sbjct: 250 EGA-VDVFVRYNADKALMNLGFDSAFNIRDIDVNPL--VLNGLRTNTKTHDFFSTKGNGY 306

Query: 117 QQ 118
            +
Sbjct: 307 IK 308


>gi|57014145|gb|AAT68710.2| ribonucleoside reductase beta subunit [Borrelia hermsii]
          Length = 321

 Score = 41.6 bits (97), Expect = 0.041,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 50/122 (40%), Gaps = 9/122 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  F   +  +   +         Q+++  +L     LE AY  +      +GL
Sbjct: 192 LRDESVHGVFVGLLAQEEFNKMTFKEQAFAQREATLILERLYYLESAYTKDLYSS--IGL 249

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEY 116
                + ++++ A++    +G +  F   +   NP   +   +    +  +FF T+   Y
Sbjct: 250 EGA-VDVFVRYNADKALMNLGFDSAFNIRDIDVNPL--VLNGLRTNTKTHDFFSTKGNGY 306

Query: 117 QQ 118
            +
Sbjct: 307 IK 308


>gi|306834752|ref|ZP_07467817.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           accolens ATCC 49726]
 gi|304569364|gb|EFM44864.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           accolens ATCC 49726]
          Length = 337

 Score = 41.2 bits (96), Expect = 0.043,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 51/136 (37%), Gaps = 17/136 (12%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY-AHETMPKGFVG 59
           +RD+++H  +      +          +E ++ +  ++ +   LE+ Y      P G   
Sbjct: 207 LRDKAVHGYYSGYKFQRGLDHATEDRREEMREFTFDLVRKLYDLEMRYSGELYEPYGL-- 264

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVT 114
                   ++++ AN+    +G   LF Y E   NP     ++   D     +FF    +
Sbjct: 265 --MDDVATFVRYNANKALMNLGYPNLFPYEECQVNPKILAALTPGSDENH--DFFSGSGS 320

Query: 115 EYQQG-----AELKWD 125
            Y  G     ++  WD
Sbjct: 321 SYIIGKAVETSDADWD 336


>gi|28377561|ref|NP_784453.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           plantarum WCFS1]
 gi|254555734|ref|YP_003062151.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           plantarum JDM1]
 gi|300769755|ref|ZP_07079637.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
 gi|308179714|ref|YP_003923842.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           plantarum subsp. plantarum ST-III]
 gi|28270393|emb|CAD63296.1| ribonucleoside-diphosphate reductase, beta chain [Lactobacillus
           plantarum WCFS1]
 gi|254044661|gb|ACT61454.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           plantarum JDM1]
 gi|300492663|gb|EFK27849.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
 gi|308045205|gb|ADN97748.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           plantarum subsp. plantarum ST-III]
          Length = 336

 Score = 41.2 bits (96), Expect = 0.044,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          +       EF+      L++    E  Y H       +G 
Sbjct: 202 LRDESVHGTYIGYKFQLGFKDRSEKQQAEFKDWMFDFLYKLYENEENYIHLVY--DQIGW 259

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
           +      + ++ AN+    +G + LF  T    NP   M+ +       +FF
Sbjct: 260 S-DEVLTFSRYNANKALMNLGQDALFPDTAEDVNPVV-MNGISTGTSNHDFF 309


>gi|187734239|ref|YP_001881572.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
           CDC 3083-94]
 gi|187431231|gb|ACD10505.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella boydii
           CDC 3083-94]
          Length = 319

 Score = 41.2 bits (96), Expect = 0.044,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETSW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|323188442|gb|EFZ73728.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli RN587/1]
          Length = 319

 Score = 41.2 bits (96), Expect = 0.046,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 50/128 (39%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISLAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115
            +   + ++ + AN+    +G EPLF       NP   +   +    ++N  FF    + 
Sbjct: 247 -SDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|116617385|ref|YP_817756.1| ribonucleotide-diphosphate reductase subunit beta [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
 gi|116096232|gb|ABJ61383.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 325

 Score = 41.2 bits (96), Expect = 0.049,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 11/91 (12%)

Query: 1   MRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
           +RDES+H  +         N+I  E       E Q     +L+E    E  Y HE     
Sbjct: 193 IRDESVHGTYIGYKFQIGFNKISAEERT----ELQSWMYDLLYELYENEEKYTHELYDD- 247

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK 87
            +G        ++++ AN+    +G EP+F 
Sbjct: 248 -LGWT-EQVLTFLRYNANKALMNLGQEPMFP 276


>gi|238755711|ref|ZP_04617045.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia ruckeri
           ATCC 29473]
 gi|238706078|gb|EEP98461.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia ruckeri
           ATCC 29473]
          Length = 323

 Score = 41.2 bits (96), Expect = 0.051,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 53/136 (38%), Gaps = 17/136 (12%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +   +  +E +  +  +L +    E+ Y  E      VG 
Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKVDAVRRQEIKNFTFELLQDLYDNEVRYTEELY--DGVGW 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
           +    ++++ + AN+    +G E LF   E     +S  I      +  +  +FF    +
Sbjct: 251 S-EDVKKFLHYNANKALMNLGYEALFPANEVT---VSAAILSALSPNADENHDFFSGSGS 306

Query: 115 EYQQGAEL-----KWD 125
            Y  G  +      WD
Sbjct: 307 SYVIGKAVNTEDDDWD 322


>gi|227431268|ref|ZP_03913322.1| ribonucleotide-diphosphate reductase subunit beta [Leuconostoc
           mesenteroides subsp. cremoris ATCC 19254]
 gi|227353030|gb|EEJ43202.1| ribonucleotide-diphosphate reductase subunit beta [Leuconostoc
           mesenteroides subsp. cremoris ATCC 19254]
          Length = 327

 Score = 41.2 bits (96), Expect = 0.051,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 11/91 (12%)

Query: 1   MRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
           +RDES+H  +         N+I  E       E Q     +L+E    E  Y HE     
Sbjct: 195 IRDESVHGTYIGYKFQIGFNKISAEERT----ELQSWMYDLLYELYENEEKYTHELYDD- 249

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK 87
            +G        ++++ AN+    +G EP+F 
Sbjct: 250 -LGWT-EQVLTFLRYNANKALMNLGQEPMFP 278


>gi|213965886|ref|ZP_03394077.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           amycolatum SK46]
 gi|213951464|gb|EEB62855.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           amycolatum SK46]
          Length = 338

 Score = 41.2 bits (96), Expect = 0.052,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 49/133 (36%), Gaps = 11/133 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +           E +  +  ++ +    EI Y  E      +G 
Sbjct: 208 IRDEAVHGYYIGYKYQRNLERLTQAERDELKDYTFDLMFDLYDNEIQYTEEMY--DELGW 265

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-PFPWMSEVIDLKKEKN--FFETRVTEYQ 117
                ++++++  N+  + +G E +F   E    P +   +    ++N  FF    + Y 
Sbjct: 266 T-EDVKRFLRYNGNKALNNLGYEGMFPADETRVSPSILSALSPNADENHDFFSGSGSSYV 324

Query: 118 QGAE-----LKWD 125
            G         WD
Sbjct: 325 MGKAEVTQDEDWD 337


>gi|331701739|ref|YP_004398698.1| ribonucleoside-diphosphate reductase [Lactobacillus buchneri NRRL
           B-30929]
 gi|329129082|gb|AEB73635.1| Ribonucleoside-diphosphate reductase [Lactobacillus buchneri NRRL
           B-30929]
          Length = 318

 Score = 41.2 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          + P    ++ +      L++    E  Y H        G 
Sbjct: 189 LRDESVHGTYIGYKFQIGYNQLPKEKQEDMKNWIYDFLYKLYGNEEKYTHILY--DQTGW 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
                  ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 247 T-EDVLTFIRYNANKALMNLGQDPLFPDTAEDVNPVV-MNGISTSTANHDFF 296


>gi|238759171|ref|ZP_04620339.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia aldovae
           ATCC 35236]
 gi|238702587|gb|EEP95136.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia aldovae
           ATCC 35236]
          Length = 323

 Score = 41.2 bits (96), Expect = 0.056,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 53/136 (38%), Gaps = 17/136 (12%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +  +    E +  +  +L +    E+ Y  +   K  VG 
Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKVDNARRLEIKNFAFDLLQDLYDNEVRYTEDLYDK--VGW 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
                ++++ + AN+    +G E LF  ++     +S  I      +  +  +FF    +
Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPISQAA---VSPAILAALSPNADENHDFFSGSGS 306

Query: 115 EYQQGAEL-----KWD 125
            Y  G  +      WD
Sbjct: 307 SYVIGKAVNTEDEDWD 322


>gi|253772463|ref|YP_003035294.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254162613|ref|YP_003045721.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           B str. REL606]
 gi|297519661|ref|ZP_06938047.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           OP50]
 gi|242378238|emb|CAQ33013.1| nrdF, subunit of ribonucleoside-diphosphate reductase 2, beta
           subunit dimer and ribonucleoside-diphosphate reductase 2
           [Escherichia coli BL21(DE3)]
 gi|253323507|gb|ACT28109.1| Ribonucleoside-diphosphate reductase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253974514|gb|ACT40185.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
           B str. REL606]
 gi|253978681|gb|ACT44351.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
           BL21(DE3)]
          Length = 319

 Score = 40.8 bits (95), Expect = 0.056,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   + ++ + AN+    +G +PLF       NP     +S   D     +FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYKPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|32491358|ref|NP_871612.1| ribonucleotide-diphosphate reductase subunit beta [Wigglesworthia
           glossinidia endosymbiont of Glossina brevipalpis]
 gi|25166565|dbj|BAC24755.1| nrdF [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 324

 Score = 40.8 bits (95), Expect = 0.058,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 52/130 (40%), Gaps = 9/130 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +  I       K  +  +  +L++    EI Y   ++ K  + +
Sbjct: 194 IRDEAVHGYYIGYKFQKDLISLNEKEKKNIKDFAFNLLYKLYENEINY-SYSLYKDIIPI 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVI-DLKKEKNFFETRVTEY 116
              +   ++ + AN+    +G E  F   E   NP   +S +  +  +  +FF    + Y
Sbjct: 253 --KNIISFLNYNANKSLMNLGYEQYFPDDESLVNP-DILSALTPNSNENHDFFSGSGSSY 309

Query: 117 QQG-AELKWD 125
             G   L  D
Sbjct: 310 VMGKTVLTKD 319


>gi|10957415|ref|NP_051641.1| ribonucleotide-diphosphate reductase subunit beta [Deinococcus
           radiodurans R1]
 gi|6460844|gb|AAF12548.1|AE001826_17 ribonucleoside-diphosphate reductase, beta chain [Deinococcus
           radiodurans R1]
          Length = 354

 Score = 40.8 bits (95), Expect = 0.060,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 15/122 (12%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLL----EIAYAHETMPKGFV 58
           DE+LH       +  +  E         Q  ++    +        E+AY  +      V
Sbjct: 217 DEALHGV----YVALLAQEKFATMNAAEQADAQAWFDDTLQALYSNELAYTEQLYAN--V 270

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEY 116
           GL     +++++F  N     + L   F   + NP   +   I  +    +FF  + + Y
Sbjct: 271 GLTGE-VKKFIRFNFNVLADNLALPRPFGDEDINPI--VQNGIQARGTTHDFFSAKGSSY 327

Query: 117 QQ 118
            +
Sbjct: 328 SK 329


>gi|237785987|ref|YP_002906692.1| ribonucleoside-diphosphate reductase subunit beta [Corynebacterium
           kroppenstedtii DSM 44385]
 gi|237758899|gb|ACR18149.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 336

 Score = 40.8 bits (95), Expect = 0.062,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 38/90 (42%), Gaps = 3/90 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      + +           ++ +  +L+E    E  Y  +      +G 
Sbjct: 206 IRDEAVHGYYIGYKYQRGQEALTQSERDGLKEYTFDLLYELYDNETQYTEDLY--DELGW 263

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90
                ++++++ AN+  + +G E LF   E
Sbjct: 264 T-EDVKRFLRYNANKALNNLGYEALFPADE 292


>gi|293394770|ref|ZP_06639061.1| ribonucleotide-diphosphate reductase subunit beta [Serratia
           odorifera DSM 4582]
 gi|291422721|gb|EFE95959.1| ribonucleotide-diphosphate reductase subunit beta [Serratia
           odorifera DSM 4582]
          Length = 319

 Score = 40.8 bits (95), Expect = 0.068,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 48/128 (37%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      ++ +  +  +L +    E+ Y  E      VG 
Sbjct: 189 IRDEAVHGYYIGYKFQKGLEQVSATRRQQVKSFAFDLLQDLYDNEVRYTEELYDD--VGW 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKNFFETRVTE 115
                + ++ + AN+    +G E LF  +    NP     +S   D     +FF    + 
Sbjct: 247 T-EDVKTFLHYNANKALMNLGYEALFPPSMAEVNPAILSALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  + 
Sbjct: 304 YVMGKAVN 311


>gi|323341317|ref|ZP_08081561.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           ruminis ATCC 25644]
 gi|323091194|gb|EFZ33822.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           ruminis ATCC 25644]
          Length = 317

 Score = 40.4 bits (94), Expect = 0.077,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 47/116 (40%), Gaps = 15/116 (12%)

Query: 1   MRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
           +RDES+H  +           +  E      ++ + +   +L++    E  Y HE     
Sbjct: 188 LRDESVHGTYIGYKFQIRYRALAEEE----QEKLKFEIVNLLYDLYQNEEKYTHELY--D 241

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
            +G        ++++ AN+    +G EPLF+ T    NP   M+ +       +FF
Sbjct: 242 ELGWT-EDVGIFLRYNANKALMNLGFEPLFEETATDVNPVV-MNGISTSTSNHDFF 295


>gi|118586508|ref|ZP_01543952.1| ribonucleoside-diphosphate reductase 2, beta subunit [Oenococcus
           oeni ATCC BAA-1163]
 gi|118433072|gb|EAV39794.1| ribonucleoside-diphosphate reductase 2, beta subunit [Oenococcus
           oeni ATCC BAA-1163]
          Length = 337

 Score = 40.4 bits (94), Expect = 0.086,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 3/86 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E      KE    +  +L++    E  Y H+ +       
Sbjct: 194 IRDESVHGTYIGYKFQLAYKELTEQEQKELNSWAYDLLYDLYDNEEKYTHQ-LYDEIDWF 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLF 86
                  ++++  N+    +GLEP+F
Sbjct: 253 --DDVMIFLRYNGNKALMNLGLEPMF 276


>gi|67592960|ref|XP_665685.1| ribonucleotide reductase small subunit [Cryptosporidium hominis
           TU502]
 gi|54656484|gb|EAL35456.1| ribonucleotide reductase small subunit [Cryptosporidium hominis]
          Length = 369

 Score = 40.4 bits (94), Expect = 0.087,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 8/92 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE   + F    I +       + TK    +   +L +A +LE  +    +    + + 
Sbjct: 239 RDEQYQVEF-CLSIAE------SMKTKPSNDQVVNLLEQAIMLEKNFIFSIVDPQVLQIE 291

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPF 93
                 ++ F A+     +     F  + NPF
Sbjct: 292 REDIVAFLLFNADEILVDLKYPRQFNVS-NPF 322


>gi|66391280|ref|YP_238601.1| ORF025 [Staphylococcus phage Twort]
 gi|62637210|gb|AAX92321.1| ORF025 [Staphylococcus phage Twort]
          Length = 349

 Score = 40.0 bits (93), Expect = 0.098,   Method: Composition-based stats.
 Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 17/124 (13%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET----MPKGFV 58
           DE+ H   G+ V    +++   L T+E Q K+  +++E  LLE+ Y +E     M    +
Sbjct: 211 DEAYH---GVGVGYTAQLDYQEL-TEEEQSKADALMYE--LLEVLYENEVSYSHMLYDKL 264

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKN--FFETRVTE 115
           GL      +Y+Q+  NR    +G +  F     NP   ++   ++ K  N  FF T+  +
Sbjct: 265 GLT-EDVIRYVQYNFNRALANLGFDDYFNPEPFNPI--VNNQTNVDKLSNADFFSTKN-D 320

Query: 116 YQQG 119
           Y++ 
Sbjct: 321 YKRS 324


>gi|162448128|ref|YP_001621260.1| ribonucleoside-diphosphate reductase subunit beta [Acholeplasma
           laidlawii PG-8A]
 gi|161986235|gb|ABX81884.1| ribonucleoside-diphosphate reductase, beta chain [Acholeplasma
           laidlawii PG-8A]
          Length = 369

 Score = 40.0 bits (93), Expect = 0.099,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 48/125 (38%), Gaps = 17/125 (13%)

Query: 1   MRDESLHL----NFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLL-EIAYAHETMPK 55
           +RDES+H         +V      E     T+        + HE   L E  Y    +  
Sbjct: 230 LRDESIHGLYVGRLAQEVFETFSNELQEQLTQWVHDFLLELYHEQNELVESIYDAVEL-- 287

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRV 113
                 +   + ++++ AN+    +G +P F+  + NP   +   ++ + +  + F  + 
Sbjct: 288 ------SHDVKIFVRYNANKALMNLGFDPYFEPEDVNPV--VLNGLNTETKTMDNFSMKG 339

Query: 114 TEYQQ 118
             YQ+
Sbjct: 340 NGYQK 344


>gi|156086328|ref|XP_001610573.1| ribonucleoside-diphosphate reductase beta subunit [Babesia bovis
           T2Bo]
 gi|154797826|gb|EDO07005.1| ribonucleoside-diphosphate reductase beta subunit, putative
           [Babesia bovis]
          Length = 329

 Score = 40.0 bits (93), Expect = 0.099,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 7/68 (10%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           D S+HL F +  +  +K+       +  ++    +L+ A  LE+AY    +P   +GL+ 
Sbjct: 207 DVSIHLKFAMAALEHLKL-------RPTRETVMELLNSAYDLEMAYCRSVLPMDHMGLSE 259

Query: 63  PSCEQYMQ 70
               QY++
Sbjct: 260 YHLSQYIK 267


>gi|325284717|ref|YP_004264180.1| Ribonucleoside-diphosphate reductase [Deinococcus proteolyticus
           MRP]
 gi|324316206|gb|ADY27320.1| Ribonucleoside-diphosphate reductase [Deinococcus proteolyticus
           MRP]
          Length = 348

 Score = 40.0 bits (93), Expect = 0.10,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 7/118 (5%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           DE++H  +   +  +   E                L +    E+AY         VGL  
Sbjct: 198 DEAVHGVYVALLAQEKFAEMNEAEQAYALAWYEETLMKLYRNELAYTEMLYAD--VGL-V 254

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
              ++++++  N     +G+E  F+  E NP   +   I  K    +FF  +   Y +
Sbjct: 255 DEVKKFIRYNCNVLADNLGVERSFEDEEINPI--VRNGIKAKGTTHDFFSAKGNSYAK 310


>gi|184156148|ref|YP_001844488.1| ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
           fermentum IFO 3956]
 gi|227515317|ref|ZP_03945366.1| ribonucleoside-diphosphate reductase [Lactobacillus fermentum ATCC
           14931]
 gi|260662379|ref|ZP_05863274.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           fermentum 28-3-CHN]
 gi|183227492|dbj|BAG28008.1| ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
           fermentum IFO 3956]
 gi|227086331|gb|EEI21643.1| ribonucleoside-diphosphate reductase [Lactobacillus fermentum ATCC
           14931]
 gi|260553070|gb|EEX26013.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           fermentum 28-3-CHN]
 gi|299783625|gb|ADJ41623.1| Ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
           fermentum CECT 5716]
          Length = 316

 Score = 40.0 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 43/114 (37%), Gaps = 10/114 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVG 59
           +RDES+H  +      Q   E        F+     +L +    E A+      P   V 
Sbjct: 186 IRDESVHGTYLGYKFQQAFAELTPDEQTRFRAWMDDLLADLLENEFAFTEVVYAPIQMV- 244

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEKNFF 109
                 +Q++++ AN+  + +G   +F +      NP   M+ +       +FF
Sbjct: 245 ---EDVKQFVRYNANKAMNNMGFAAIFNHAAIEDINPIV-MNGISTETANHDFF 294


>gi|300934659|ref|ZP_07149915.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           resistens DSM 45100]
          Length = 332

 Score = 40.0 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 16/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RD+++H  +      +    +P   T E  + +  +L +   LE+ Y+ E      +GL
Sbjct: 203 LRDKAVHGYYSGYKFQRGLENHPE-RTAELSEFTHALLEKLFELEVLYSAELY--EPLGL 259

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID-----LKKEKNFFETRVTE 115
             P   +++++ AN+    +G  P F   E       E++        +  +FF    + 
Sbjct: 260 -MPDVVKFVKYNANKALMNLGYHPHFAAEETDVS--PEILSALTPGADENHDFFSGSGSS 316

Query: 116 YQQG-----AELKWD 125
           Y  G     A+  WD
Sbjct: 317 YIMGKAEETADTDWD 331


>gi|24113980|ref|NP_708490.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri 2a str. 301]
 gi|30064043|ref|NP_838214.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri 2a str. 2457T]
 gi|110806691|ref|YP_690211.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri 5 str. 8401]
 gi|24053093|gb|AAN44197.1| ribonucleoside-diphosphate reductase 2, beta chain [Shigella
           flexneri 2a str. 301]
 gi|30042299|gb|AAP18024.1| ribonucleoside-diphosphate reductase 2, beta chain [Shigella
           flexneri 2a str. 2457T]
 gi|110616239|gb|ABF04906.1| ribonucleoside-diphosphate reductase 2, beta chain [Shigella
           flexneri 5 str. 8401]
 gi|281602052|gb|ADA75036.1| Ribonucleoside-diphosphate reductase 2, beta chain [Shigella
           flexneri 2002017]
 gi|313648326|gb|EFS12770.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
           flexneri 2a str. 2457T]
 gi|332753393|gb|EGJ83773.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
           flexneri 4343-70]
 gi|332753901|gb|EGJ84276.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
           flexneri K-671]
 gi|332755661|gb|EGJ86024.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
           flexneri 2747-71]
 gi|332765626|gb|EGJ95839.1| ribonucleoside-diphosphate reductase subunit beta nrdF2 [Shigella
           flexneri 2930-71]
 gi|332999413|gb|EGK18998.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
           flexneri VA-6]
 gi|333000691|gb|EGK20268.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
           flexneri K-218]
 gi|333015924|gb|EGK35260.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
           flexneri K-304]
          Length = 319

 Score = 39.6 bits (92), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 48/128 (37%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   + ++ +  N+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -ADDVKAFLCYNTNKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|333001013|gb|EGK20583.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
           flexneri K-272]
 gi|333015483|gb|EGK34822.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
           flexneri K-227]
          Length = 319

 Score = 39.6 bits (92), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 48/128 (37%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   + ++ +  N+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -ADDVKAFLCYNTNKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|323167149|gb|EFZ52867.1| ribonucleoside-diphosphate reductase 2 subunit beta domain protein
           [Shigella sonnei 53G]
          Length = 150

 Score = 39.6 bits (92), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 20  IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 77

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   + ++ + AN+    +G EPLF       NP     +S   D     +FF    + 
Sbjct: 78  -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 134

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 135 YVMGKAVE 142


>gi|319948549|ref|ZP_08022680.1| ribonucleotide-diphosphate reductase subunit beta [Dietzia cinnamea
           P4]
 gi|319437796|gb|EFV92785.1| ribonucleotide-diphosphate reductase subunit beta [Dietzia cinnamea
           P4]
          Length = 338

 Score = 39.6 bits (92), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 11/133 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +           E +  +  +L E    E  Y  +      VG 
Sbjct: 208 IRDEAVHGYYIGYKYQRGLEHVTQAERDELKDYTFELLFELYDNEADYTEDLY--DPVGW 265

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVI-DLKKEKNFFETRVTEYQ 117
                ++++++ AN+    +G E +F   E       +S +  +  +  +FF    + Y 
Sbjct: 266 T-EDVKKFLRYNANKALMNMGYEGMFPKDETDVDPAILSALSPNADENHDFFSGSGSSYV 324

Query: 118 QGAE-----LKWD 125
            G         WD
Sbjct: 325 MGKAEATEDEDWD 337


>gi|126649263|ref|XP_001388304.1| ribonucleotide reductase small subunit [Cryptosporidium parvum Iowa
           II]
 gi|126117398|gb|EAZ51498.1| ribonucleotide reductase small subunit [Cryptosporidium parvum Iowa
           II]
          Length = 339

 Score = 39.6 bits (92), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 8/92 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE   + F    I +       + TK    +   +L +A +LE  +    +    + + 
Sbjct: 239 RDEQYQVEF-CLSIAK------SMKTKPSNDQVVNLLEQAIMLEKNFIFSIVDPQVLQIE 291

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPF 93
                 ++ F A+     +     F  + NPF
Sbjct: 292 REDIVAFLLFNADEILVDLKYPRQFNVS-NPF 322


>gi|209762238|gb|ACI79431.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia
           coli]
 gi|320646030|gb|EFX15007.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H- str. 493-89]
 gi|320651330|gb|EFX19761.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H- str. H 2687]
          Length = 319

 Score = 39.6 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 14/130 (10%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
           +RDE++H  +        K          +E +  +  +L E    E+ Y  E   +   
Sbjct: 189 IRDEAVHGYYIG--YKHQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW 246

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRV 113
              A   + ++ + AN+    +G EPLF       NP   +   +    ++N  FF    
Sbjct: 247 ---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHDFFSGSG 301

Query: 114 TEYQQGAELK 123
           + Y  G  ++
Sbjct: 302 SSYVMGKAVE 311


>gi|251788642|ref|YP_003003363.1| Ribonucleoside-diphosphate reductase [Dickeya zeae Ech1591]
 gi|247537263|gb|ACT05884.1| Ribonucleoside-diphosphate reductase [Dickeya zeae Ech1591]
          Length = 320

 Score = 39.6 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      Q          ++ Q  +  +L      E+ Y HE      VG 
Sbjct: 190 IRDEAVHGYYIGYKYQQGLKRLSTPEQRDLQLFAYELLQTLYDNEVDYTHELY--DSVGW 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN--FFETRVTE 115
           +    + ++ + AN+    +G E LF       NP   +   +    E+N  FF    + 
Sbjct: 248 SGDVIK-FLHYNANKALMNLGYEALFPADMTDVNPA--ILAALSPGAEENHDFFSGAGSS 304

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 305 YVIGKAVE 312


>gi|223954268|gb|ACN30264.1| UL40 [Anatid herpesvirus 1]
          Length = 46

 Score = 39.6 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 80  IGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAELKW 124
           IGL PLF        +    +   ++ NFFE R T Y  G+ L  
Sbjct: 2   IGLAPLFDEPPPKHDFPLAFMATSQQTNFFERRNTTYA-GSVLND 45


>gi|319440834|ref|ZP_07989990.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           variabile DSM 44702]
          Length = 316

 Score = 39.6 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 45/124 (36%), Gaps = 6/124 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE +H  +                 +  + +   +L +    E AY         +G 
Sbjct: 186 IRDEVVHGYYIGYKYQVGMAGWSSAEQQAIKDEVFDLLLDLYDNECAYTETLY--DELGW 243

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-PFPWMSEVID--LKKEKNFFETRVTEYQ 117
                ++++++ AN+  + +G E +F   E    P +   +D    +  +FF    + Y 
Sbjct: 244 T-EDVKRFLRYNANKALNNLGYEGVFPQDECRVSPAILASLDPGANENHDFFSGSGSAYT 302

Query: 118 QGAE 121
            G  
Sbjct: 303 IGTA 306


>gi|323342959|ref|ZP_08083190.1| ribonucleotide-diphosphate reductase subunit beta [Erysipelothrix
           rhusiopathiae ATCC 19414]
 gi|322463023|gb|EFY08218.1| ribonucleotide-diphosphate reductase subunit beta [Erysipelothrix
           rhusiopathiae ATCC 19414]
          Length = 358

 Score = 39.6 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 50/133 (37%), Gaps = 17/133 (12%)

Query: 1   MRDESLHL----NFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
           +RDES+H     N  +++  +   E      +        +  E   L  A      P  
Sbjct: 224 LRDESIHGLYIGNLAMELYRKFDAETQASLYEWLTTYLDAIYEEEVELIEAIYD---PVE 280

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVT 114
                +   + ++++ AN+    +G +  ++Y E NP   +   ++ + +  + F  +  
Sbjct: 281 L----SHDVKIFVRYNANKAMMNLGFDAYYEYEEVNPV--VLNGLNTETKTMDNFSMKGN 334

Query: 115 EYQ--QGAELKWD 125
            YQ  +   L  D
Sbjct: 335 GYQKMKSESLHDD 347


>gi|323508655|dbj|BAJ77221.1| cgd6_700 [Cryptosporidium parvum]
          Length = 285

 Score = 39.6 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 8/92 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE   + F    I +       + TK    +   +L +A +LE  +    +    + + 
Sbjct: 185 RDEQYQVEF-CLSIAK------SMKTKPSNDQVVNLLEQAIMLEKNFIFSIVDPQVLQIE 237

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPF 93
                 ++ F A+     +     F  + NPF
Sbjct: 238 REDIVAFLLFNADEILVDLKYPRQFNVS-NPF 268


>gi|296086891|emb|CBI33064.3| unnamed protein product [Vitis vinifera]
          Length = 301

 Score = 39.2 bits (91), Expect = 0.16,   Method: Composition-based stats.
 Identities = 7/18 (38%), Positives = 9/18 (50%)

Query: 2  RDESLHLNFGIDVINQIK 19
          RDE LH +F   +    K
Sbjct: 35 RDEGLHCDFACLLYKNRK 52


>gi|329296713|ref|ZP_08254049.1| ribonucleoside-diphosphate reductase [Plautia stali symbiont]
          Length = 319

 Score = 39.2 bits (91), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 44/128 (34%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +           E QQ +  +L      E+ Y         VG 
Sbjct: 189 IRDEAVHGYYIGYKYQKALETVDDARRAELQQFAIELLLALYENEVVYTEALYAD--VGW 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115
                + ++ + AN+    +G E L        NP     +S   D     +FF    + 
Sbjct: 247 T-EEVKTFLHYNANKALMNLGYEALSPAELTAVNPAILSALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|296104353|ref|YP_003614499.1| ribonucleotide-diphosphate reductase subunit beta [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295058812|gb|ADF63550.1| ribonucleotide-diphosphate reductase subunit beta [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 319

 Score = 39.2 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 50/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +   +  +E +  +  +L +    E++Y  E         
Sbjct: 189 IRDEAVHGYYIGYKYQKGLEKVSDVRREELKGFALDLLMDLYDNELSYTEELYAGTGW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
                + ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 247 -EEEVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK-----WD 125
           Y  G  ++     WD
Sbjct: 304 YVMGKAVETEDEDWD 318


>gi|157159438|ref|YP_001463986.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           E24377A]
 gi|218555224|ref|YP_002388137.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           IAI1]
 gi|300815921|ref|ZP_07096145.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 107-1]
 gi|157081468|gb|ABV21176.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E24377A]
 gi|218361992|emb|CAQ99598.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli IAI1]
 gi|300531850|gb|EFK52912.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 107-1]
          Length = 319

 Score = 39.2 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 48/128 (37%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
            A   + ++ + AN+    +  EPLF       NP     +S   D     +FF    + 
Sbjct: 247 -ADDVKAFLCYNANKALMNLDYEPLFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|116490256|ref|YP_809800.1| ribonucleotide-diphosphate reductase subunit beta [Oenococcus oeni
           PSU-1]
 gi|290889638|ref|ZP_06552728.1| hypothetical protein AWRIB429_0118 [Oenococcus oeni AWRIB429]
 gi|116090981|gb|ABJ56135.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Oenococcus oeni PSU-1]
 gi|290480836|gb|EFD89470.1| hypothetical protein AWRIB429_0118 [Oenococcus oeni AWRIB429]
          Length = 337

 Score = 39.2 bits (91), Expect = 0.21,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 34/86 (39%), Gaps = 3/86 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E      K+    +  +L++    E  Y H+ +       
Sbjct: 194 IRDESVHGTYIGYKFQLAYKELTEQEQKDLNSWAYDLLYDLYDNEEKYTHQ-LYDEIDWF 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLF 86
                  ++++  N+    +GLEP+F
Sbjct: 253 --DDVMIFLRYNGNKALMNLGLEPMF 276


>gi|260599071|ref|YP_003211642.1| ribonucleotide-diphosphate reductase subunit beta [Cronobacter
           turicensis z3032]
 gi|260218248|emb|CBA33173.1| Ribonucleoside-diphosphate reductase 2 subunit beta [Cronobacter
           turicensis z3032]
          Length = 320

 Score = 38.9 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 49/134 (36%), Gaps = 13/134 (9%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      Q   +      +  +  +  ++ E    E+AY         VG 
Sbjct: 190 IRDEAVHGYYIGYKYQQGLAQVDDARRESLKTFALDLMMELYDNELAYTEALYRD--VGW 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEK-NFFETRVTEY 116
                  ++ + AN+    +G E LF       NP   ++ +     E  +FF    + Y
Sbjct: 248 -VDDVSAFLCYNANKALMNLGYEALFPPEMAQVNP-SILAALSPGADENHDFFSGSGSSY 305

Query: 117 QQGAELK-----WD 125
             G  ++     WD
Sbjct: 306 VMGKAVETEDADWD 319


>gi|237729635|ref|ZP_04560116.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter sp.
           30_2]
 gi|226908241|gb|EEH94159.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter sp.
           30_2]
          Length = 319

 Score = 38.9 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 45/128 (35%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L E    E  Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKGLEHISESAREELKNFAFDLLMELYDNEARYTEELYAETGW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
                + ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 247 -VDDVKAFLCYNANKALMNLGYEALFPPEMAEVNPTILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAVE 311


>gi|146312797|ref|YP_001177871.1| ribonucleotide-diphosphate reductase subunit beta [Enterobacter sp.
           638]
 gi|145319673|gb|ABP61820.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Enterobacter sp. 638]
          Length = 319

 Score = 38.5 bits (89), Expect = 0.29,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 49/135 (36%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L +    E++Y  E         
Sbjct: 189 IRDEAVHGYYIGYKYQKGLEKISEAKREELKGFALDLLMDLYDNELSYTEELYAGTSW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
                + ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 247 -ETDVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK-----WD 125
           Y  G  ++     WD
Sbjct: 304 YVMGKAVETEDADWD 318


>gi|328958551|ref|YP_004375937.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium
           sp. 17-4]
 gi|328674875|gb|AEB30921.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium
           sp. 17-4]
          Length = 328

 Score = 38.5 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 11/86 (12%), Positives = 28/86 (32%), Gaps = 3/86 (3%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63
           ESLH  +          E       E +  +  +  +    E+ Y  +   +        
Sbjct: 201 ESLHCFYISHKFQLGFSELSQQEQTELRDWTFDLFVDLVNNELNYIEQIYYRTDW---LE 257

Query: 64  SCEQYMQFIANRRCHQIGLEPLFKYT 89
             + +++  AN     +G + ++  +
Sbjct: 258 EVKDFIRQQANNALKSLGFDTIYPES 283


>gi|156932794|ref|YP_001436710.1| ribonucleotide-diphosphate reductase subunit beta [Cronobacter
           sakazakii ATCC BAA-894]
 gi|156531048|gb|ABU75874.1| hypothetical protein ESA_00590 [Cronobacter sakazakii ATCC BAA-894]
          Length = 320

 Score = 38.5 bits (89), Expect = 0.31,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 49/134 (36%), Gaps = 13/134 (9%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      Q   +      +  +  S  ++ E    E+AY         VG 
Sbjct: 190 IRDEAVHGYYIGYKYQQALAQVDDARRESLKTFSLDLMMELYDNELAYTEALYRD--VGW 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEK-NFFETRVTEY 116
                  ++ + AN+    +G E LF       NP   ++ +     E  +FF    + Y
Sbjct: 248 -VDDVSAFLCYNANKALMNLGYEALFPPEMAQVNP-SILAALSPGADENHDFFSGSGSSY 305

Query: 117 QQGAELK-----WD 125
             G  ++     WD
Sbjct: 306 VMGKAVETEDEDWD 319


>gi|328713560|ref|XP_003245116.1| PREDICTED: ribonucleoside-diphosphate reductase small chain-like
           [Acyrthosiphon pisum]
          Length = 62

 Score = 38.1 bits (88), Expect = 0.39,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 5/65 (7%)

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
            VG +       ++  A+    + G         +PF    E+   + + NFFE R++++
Sbjct: 1   MVGKSCEKIH--IEDFADGLLKESGFLQFTGRQTHPF---MELTSQQGKTNFFERRLSKH 55

Query: 117 QQGAE 121
           Q  + 
Sbjct: 56  QLSSV 60


>gi|157148214|ref|YP_001455533.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter
           koseri ATCC BAA-895]
 gi|157085419|gb|ABV15097.1| hypothetical protein CKO_04025 [Citrobacter koseri ATCC BAA-895]
          Length = 319

 Score = 38.1 bits (88), Expect = 0.39,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +       E +  +  +L E    E  Y  E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKGLEKLSESERDELKHFALDLLMELYDNESRYTEELYAETGW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
                  ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 247 -VADVNAFLCYNANKALMNLGYEALFPAEMAEVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKAIE 311


>gi|319440691|ref|ZP_07989847.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           variabile DSM 44702]
          Length = 335

 Score = 38.1 bits (88), Expect = 0.44,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 49/138 (35%), Gaps = 21/138 (15%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RD+++H  +      +    +P     E +  +     E   LE  Y+ +    G   L
Sbjct: 205 LRDKAVHGYYSGYKYQRGLDAHPERV-AEMEDFTYRFTAELLALENEYSRDLYSLGS--L 261

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVI-----DLKKEKNFFETR 112
           +    + ++ + A++    +G  P ++       P     E+I     D  +  +FF   
Sbjct: 262 DYAGVDAFVHYNADKALMNLGYGPQYEDAAAGVEP-----EIIAALTPDSSETHDFFSGS 316

Query: 113 VTEYQQGAEL-----KWD 125
            + Y  G         WD
Sbjct: 317 GSSYVMGRAEVTEEDDWD 334


>gi|323354474|gb|EGA86313.1| Rnr2p [Saccharomyces cerevisiae VL3]
          Length = 306

 Score = 37.7 bits (87), Expect = 0.53,   Method: Composition-based stats.
 Identities = 7/20 (35%), Positives = 11/20 (55%)

Query: 2   RDESLHLNFGIDVINQIKIE 21
           RDE LH +F   +   +K +
Sbjct: 271 RDEGLHTDFACLLFAHLKNK 290


>gi|48696469|ref|YP_024511.1| putative ribonucleotide reductase minor subunit [Staphylococcus
           phage K]
 gi|37729163|gb|AAO47530.1| ORF81 [Staphylococcus phage K]
 gi|119658118|gb|ABL87153.1| putative ribonucleotide reductase minor subunit [Staphylococcus
           phage 812]
 gi|182627942|gb|ACB89104.1| gp ORF111 [Staphylococcus phage A5W]
          Length = 349

 Score = 37.7 bits (87), Expect = 0.54,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 17/129 (13%)

Query: 3   DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
           DE+ H +          N +  E      KE    +  +L      E+AY H       +
Sbjct: 210 DEAYHGSAVGLTAQYDYNLLTEEEKKQADKE----TYELLDILYTNEVAYTHSLY--DPL 263

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKN--FFETRVTE 115
            L+      Y+Q+  NR    +G E  F     NP   +    ++ + +N  FF  +  +
Sbjct: 264 ELS-EDVINYVQYNFNRALQNLGREDYFNPEPYNPI--VENQTNVDRLRNVDFFSGK-AD 319

Query: 116 YQQGAELKW 124
           Y++   +K 
Sbjct: 320 YEKSTNIKD 328


>gi|281207436|gb|EFA81619.1| hypothetical protein PPL_05610 [Polysphondylium pallidum PN500]
          Length = 1292

 Score = 37.7 bits (87), Expect = 0.55,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 16/54 (29%), Gaps = 7/54 (12%)

Query: 4   ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 57
           E  H  FG  + +++         K   +   +++ +A   E            
Sbjct: 217 EYTHCEFGRLLYSKLI-------NKLDTEMIESIIRDAVDCEKQIMESETGDSI 263


>gi|194246584|ref|YP_002004223.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Phytoplasma mali]
 gi|193806941|emb|CAP18373.1| Ribonucleoside-diphosphate reductase, beta chain [Candidatus
           Phytoplasma mali]
          Length = 348

 Score = 37.7 bits (87), Expect = 0.55,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 48/120 (40%), Gaps = 7/120 (5%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +   +   I      L   E  +    +L      +IA       + ++  
Sbjct: 215 IRDESVHGVYIARLALNIYNSFDKLIKDELSKWMYDLLKYFYQEQIALVKSVYNEHYL-- 272

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
                 +++++ AN+    +G  P F+  E NP   +   ++ + +  + F  +   YQ+
Sbjct: 273 -INDVNKFVRYNANKALMNLGFNPYFEKEEVNPV--ILNGLNTETKTMDNFSMKGNGYQK 329


>gi|323333040|gb|EGA74442.1| Rnr2p [Saccharomyces cerevisiae AWRI796]
          Length = 306

 Score = 37.7 bits (87), Expect = 0.56,   Method: Composition-based stats.
 Identities = 7/20 (35%), Positives = 11/20 (55%)

Query: 2   RDESLHLNFGIDVINQIKIE 21
           RDE LH +F   +   +K +
Sbjct: 271 RDEGLHTDFACLLFAHLKNK 290


>gi|82545243|ref|YP_409190.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
           Sb227]
 gi|81246654|gb|ABB67362.1| ribonucleoside-diphosphate reductase 2, beta chain, frag [Shigella
           boydii Sb227]
 gi|320186462|gb|EFW61190.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri CDC 796-83]
 gi|332091953|gb|EGI97031.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
           boydii 3594-74]
          Length = 304

 Score = 37.7 bits (87), Expect = 0.59,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 3/88 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L E    E+ Y+ E   +     
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYSDELYAETPW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY 88
            A   + ++ + AN+    +G EPLF  
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPA 273


>gi|161502142|ref|YP_001569254.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. arizonae serovar 62:z4,z23:-- str.
           RSK2980]
 gi|160863489|gb|ABX20112.1| hypothetical protein SARI_00165 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 319

 Score = 37.3 bits (86), Expect = 0.73,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 44/130 (33%), Gaps = 14/130 (10%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH--ETMPKGFV 58
           +RDE++H  +          +   +  +E +  +  +L E    E  Y            
Sbjct: 189 IRDEAVHGYYIGYKYQIALQKQSAIEREELKLFALDLLMELYDNETRYTEALYAETDWV- 247

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRV 113
                  + ++ + AN+    +G E LF       NP     +S   D     +FF    
Sbjct: 248 ----DDVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENH--DFFSGSG 301

Query: 114 TEYQQGAELK 123
           + Y  G  ++
Sbjct: 302 SSYVMGKAVE 311


>gi|66394974|ref|YP_240948.1| ORF025 [Staphylococcus phage G1]
 gi|62636996|gb|AAX92107.1| ORF025 [Staphylococcus phage G1]
          Length = 265

 Score = 37.3 bits (86), Expect = 0.79,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 17/129 (13%)

Query: 3   DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
           DE+ H +          N +  E      KE    +  +L      E+AY H       +
Sbjct: 126 DEAYHGSAVGLTAQYDYNLLTEEEKKQADKE----TYELLDILYTNEVAYTHSLY--DPL 179

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKN--FFETRVTE 115
            L+      Y+Q+  NR    +G E  F     NP   +    ++ + +N  FF  +  +
Sbjct: 180 ELS-EDVINYVQYNFNRALQNLGREDYFNPEPYNPI--VENQTNVDRLRNVDFFSGK-AD 235

Query: 116 YQQGAELKW 124
           Y++   +K 
Sbjct: 236 YEKSTNIKD 244


>gi|254993837|ref|ZP_05276027.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL J2-064]
          Length = 48

 Score = 36.9 bits (85), Expect = 1.00,   Method: Composition-based stats.
 Identities = 8/34 (23%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 87  KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
            +++N   W+    D   + + +FFE R + Y++
Sbjct: 5   GHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 38


>gi|238896131|ref|YP_002920867.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella
           pneumoniae NTUH-K2044]
 gi|238548449|dbj|BAH64800.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 333

 Score = 36.9 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L +    E+AY+ E   +     
Sbjct: 203 IRDEAVHGYYIGYKYQKGLEIVSPGKREELKNFALDLLMDLYDNELAYSRELYGESGW-- 260

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
                  ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 261 -FDDVSAFLCYNANKALMNLGYEALFPAEMAAVNPAILAALSPNADENH--DFFSGSGSS 317

Query: 116 YQQG-----AELKWD 125
           Y  G     A+  WD
Sbjct: 318 YVIGKMEETADDDWD 332


>gi|330013348|ref|ZP_08307619.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
 gi|328533536|gb|EGF60259.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
          Length = 320

 Score = 36.6 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 50/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L +    E+AY+ E   +     
Sbjct: 190 IRDEAVHGYYIGYKYQKGLEIVSPGKREELKNFALDLLMDLYDNELAYSRELYGESGW-- 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115
                  ++ + AN+    +G E LF       NP   +   +    ++N  FF    + 
Sbjct: 248 -FDDVSAFLCYNANKALMNLGYEALFPAEMAAVNPA--ILAALSPNADENHDFFSGSGSS 304

Query: 116 YQQG-----AELKWD 125
           Y  G     A+  WD
Sbjct: 305 YVIGKMEETADDDWD 319


>gi|295097265|emb|CBK86355.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 319

 Score = 36.6 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 50/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +   +      +E +  +  +L +    E++Y  E         
Sbjct: 189 IRDEAVHGYYIGYKYQKGLEKVSAEKREELKGFALDLLMDLYDNELSYTEELYAGTGW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115
                + ++ + AN+    +G E LF       NP   +   +    ++N  FF    + 
Sbjct: 247 -EEDVKAFLCYNANKALMNLGYEALFPPEMAEVNPA--ILAALSPNADENHDFFSGSGSS 303

Query: 116 YQQGAELK-----WD 125
           Y  G  ++     WD
Sbjct: 304 YVMGKAVETQDEDWD 318


>gi|288933942|ref|YP_003438001.1| ribonucleoside-diphosphate reductase [Klebsiella variicola At-22]
 gi|290510980|ref|ZP_06550349.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           1_1_55]
 gi|288888671|gb|ADC56989.1| Ribonucleoside-diphosphate reductase [Klebsiella variicola At-22]
 gi|289775973|gb|EFD83972.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           1_1_55]
          Length = 320

 Score = 36.6 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 50/135 (37%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L +    E+AY+ E   +     
Sbjct: 190 IRDEAVHGYYIGYKYQKGLEIVSPGKREELKNFALDLLMDLYDNELAYSRELYGESGW-- 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115
                  ++ + AN+    +G E LF       NP   +   +    ++N  FF    + 
Sbjct: 248 -FDDVSAFLCYNANKALMNLGYEALFPAEMAAVNPA--ILAALSPNADENHDFFSGSGSS 304

Query: 116 YQQG-----AELKWD 125
           Y  G     A+  WD
Sbjct: 305 YVIGKTEETADDDWD 319


>gi|197294249|ref|YP_001798790.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Phytoplasma australiense]
 gi|171853576|emb|CAM11447.1| Ribonucleotide reductase, beta subunit [Candidatus Phytoplasma
           australiense]
          Length = 344

 Score = 36.6 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 4/119 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +   +  ++         KE +      +      ++    E   K  +  
Sbjct: 216 IRDESIHGVYIGRLATELYHLFDDDTKKELKTWLDATMKTLYKEQMELVKEVYSK--LSY 273

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
                ++++++ AN+    +G +  F   EN  P +   ++ + +  + F  +   YQ+
Sbjct: 274 LEEDVQKFVRYNANKALMNLGFDAFFP-EENVNPVVLNGLNTETKTMDNFSMKGNGYQK 331


>gi|16766119|ref|NP_461734.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|167992529|ref|ZP_02573627.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|168233769|ref|ZP_02658827.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|194469894|ref|ZP_03075878.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|197251114|ref|YP_002147708.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|204929699|ref|ZP_03220773.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|238909579|ref|ZP_04653416.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Tennessee str.
           CDC07-0191]
 gi|585861|sp|P17424|RIR4_SALTY RecName: Full=Ribonucleoside-diphosphate reductase 2 subunit beta;
           AltName: Full=R2F protein; AltName: Full=Ribonucleotide
           reductase 2
 gi|4389108|pdb|2R2F|A Chain A, Ribonucleotide Reductase R2f Protein From Salmonella
           Typhimurium (Oxidized)
 gi|4389109|pdb|2R2F|B Chain B, Ribonucleotide Reductase R2f Protein From Salmonella
           Typhimurium (Oxidized)
 gi|4389155|pdb|1R2F|A Chain A, Ribonucleotide Reductase R2f Protein From Salmonella
           Typhimurium
 gi|4389156|pdb|1R2F|B Chain B, Ribonucleotide Reductase R2f Protein From Salmonella
           Typhimurium
 gi|109157246|pdb|2BQ1|I Chain I, Ribonucleotide Reductase Class 1b Holocomplex R1e,R2f From
           Salmonella Typhimurium
 gi|109157247|pdb|2BQ1|J Chain J, Ribonucleotide Reductase Class 1b Holocomplex R1e,R2f From
           Salmonella Typhimurium
 gi|311979|emb|CAA51695.1| ribonucleoside-diphosphate reductase [Salmonella enterica subsp.
           enterica serovar Typhimurium]
 gi|16421357|gb|AAL21693.1| ribonucleoside-diphosphate reductase 2, beta subunit [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|194456258|gb|EDX45097.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|197214817|gb|ACH52214.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|204321418|gb|EDZ06618.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205329263|gb|EDZ16027.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|205332191|gb|EDZ18955.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|261247949|emb|CBG25782.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267994924|gb|ACY89809.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           14028S]
 gi|301159373|emb|CBW18891.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
 gi|312913831|dbj|BAJ37805.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|321223605|gb|EFX48670.1| Ribonucleotide reductase of class Ib aerobic, beta subunit
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
 gi|323131164|gb|ADX18594.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str. 4/74]
 gi|332989685|gb|AEF08668.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str. UK-1]
          Length = 319

 Score = 36.6 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          +   +  +E +  +  +L E    EI Y  E +      +
Sbjct: 189 IRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEIRY-TEALYAETGWV 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
           N    + ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 248 N--DVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKTVE 311


>gi|307104534|gb|EFN52787.1| hypothetical protein CHLNCDRAFT_10712 [Chlorella variabilis]
          Length = 214

 Score = 36.6 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 6/20 (30%), Positives = 10/20 (50%)

Query: 2   RDESLHLNFGIDVINQIKIE 21
           RDE LH +F   +   ++  
Sbjct: 195 RDEGLHTDFACHLYELLQNR 214


>gi|168238723|ref|ZP_02663781.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|194737146|ref|YP_002115764.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|194712648|gb|ACF91869.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197288484|gb|EDY27861.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
          Length = 319

 Score = 36.6 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          +   +  +E +  +  +L E    EI Y  E +      +
Sbjct: 189 IRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEIRY-TEALYAETGWV 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
           N    + ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 248 N--DVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKTVE 311


>gi|152971534|ref|YP_001336643.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|150956383|gb|ABR78413.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
          Length = 320

 Score = 36.6 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L +    E+AY+ E   +     
Sbjct: 190 IRDEAVHGYYIGYKYQKGLEIVSPGKREELKNFALDLLMDLYDNELAYSRELYGESGW-- 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
                  ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 248 -FDDVSAFLCYNANKALMNLGYEALFPAEMAAVNPAILAALSPNADENH--DFFSGSGSS 304

Query: 116 YQQG-----AELKWD 125
           Y  G     A+  WD
Sbjct: 305 YVIGKMEETADDDWD 319


>gi|322614368|gb|EFY11299.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315996572]
 gi|322621567|gb|EFY18420.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-1]
 gi|322624428|gb|EFY21261.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-3]
 gi|322626626|gb|EFY23431.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-4]
 gi|322633514|gb|EFY30256.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-1]
 gi|322638443|gb|EFY35141.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-2]
 gi|322639746|gb|EFY36430.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 531954]
 gi|322643792|gb|EFY40342.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322649478|gb|EFY45912.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           OH_2009072675]
 gi|322655932|gb|EFY52232.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322661327|gb|EFY57552.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 19N]
 gi|322662525|gb|EFY58733.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           81038-01]
 gi|322666899|gb|EFY63074.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MD_MDA09249507]
 gi|322671269|gb|EFY67392.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 414877]
 gi|322677724|gb|EFY73787.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 366867]
 gi|322681449|gb|EFY77479.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 413180]
 gi|322683848|gb|EFY79858.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 446600]
 gi|323193763|gb|EFZ78966.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           609458-1]
 gi|323197449|gb|EFZ82586.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           556150-1]
 gi|323203264|gb|EFZ88293.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 609460]
 gi|323205210|gb|EFZ90185.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           507440-20]
 gi|323212777|gb|EFZ97588.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 556152]
 gi|323218081|gb|EGA02793.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB101509-0077]
 gi|323221656|gb|EGA06069.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB102109-0047]
 gi|323225124|gb|EGA09375.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB110209-0055]
 gi|323230844|gb|EGA14962.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB111609-0052]
 gi|323234805|gb|EGA18891.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009083312]
 gi|323238844|gb|EGA22894.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009085258]
 gi|323241544|gb|EGA25575.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315731156]
 gi|323248309|gb|EGA32245.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2009159199]
 gi|323252925|gb|EGA36759.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008282]
 gi|323256953|gb|EGA40662.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008283]
 gi|323260572|gb|EGA44183.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008284]
 gi|323264370|gb|EGA47876.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008285]
 gi|323269504|gb|EGA52957.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008287]
          Length = 319

 Score = 36.6 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          +   +  +E +  +  +L E    EI Y  E +      +
Sbjct: 189 IRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEICY-TEALYAETDWV 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
           N    + ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 248 N--DVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKTVE 311


>gi|262043918|ref|ZP_06017006.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259038772|gb|EEW39955.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 320

 Score = 36.6 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L +    E+AY+ E   +     
Sbjct: 190 IRDEAVHGYYIGYKYQKGLEIVSPGKREELKNFALDLLMDLYDNELAYSRELYGESGW-- 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
                  ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 248 -FDDVSAFLCYNANKALMNLGYEALFPAEMAAVNPAILAALSPNADENH--DFFSGSGSS 304

Query: 116 YQQG-----AELKWD 125
           Y  G     A+  WD
Sbjct: 305 YVIGKMEETADDDWD 319


>gi|261342124|ref|ZP_05969982.1| ribonucleoside-diphosphate reductase, beta subunit [Enterobacter
           cancerogenus ATCC 35316]
 gi|288315455|gb|EFC54393.1| ribonucleoside-diphosphate reductase, beta subunit [Enterobacter
           cancerogenus ATCC 35316]
          Length = 319

 Score = 36.2 bits (83), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 47/135 (34%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L +    E++Y            
Sbjct: 189 IRDEAVHGYYIGYKYQKGLEIVSEARREELKGFALDLLMDLYDNELSYTEALYAGSGW-- 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
                + ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 247 -EDEVKAFLCYNANKALMNLGYEALFPPDMADVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK-----WD 125
           Y  G  ++     WD
Sbjct: 304 YVMGKAVETEDEDWD 318


>gi|259907588|ref|YP_002647944.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia
           pyrifoliae Ep1/96]
 gi|224963210|emb|CAX54694.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia
           pyrifoliae Ep1/96]
 gi|283477430|emb|CAY73346.1| ribonucleoside-diphosphate reductase 2 beta chain [Erwinia
           pyrifoliae DSM 12163]
          Length = 319

 Score = 36.2 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DE++H  +      +   +   L  +E QQ +  +L E    E+AY  E +  G  G 
Sbjct: 189 IKDEAVHGYYIGYKYQKALEKETPLRKEELQQFAIELLLELYENELAY-TEALYAGV-GW 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN--FFETRVTE 115
                ++++ + AN+    +G E LF       NP   +   +    ++N  FF    + 
Sbjct: 247 -QEDVKKFLHYNANKALMNLGYEALFPADMTDVNPA--ILAALSPNADENHDFFSGSGSS 303

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 304 YVMGKAVDTQDEDWD 318


>gi|168262084|ref|ZP_02684057.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|205349275|gb|EDZ35906.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
          Length = 319

 Score = 36.2 bits (83), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          +   +  KE +  +  +L E    EI Y  E +      +
Sbjct: 189 IRDEAVHGYYIGYKYQIALQKLSAIERKELKLFALDLLMELYDNEICY-TEALYAETGWV 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN--FFETRVTE 115
           N    + ++ + AN+    +G E LF       NP   +   +    ++N  FF    + 
Sbjct: 248 N--DVKAFLCYNANKALMNLGYEALFPPEMADVNPA--ILAALSPNADENHDFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKTVE 311


>gi|328700623|ref|XP_003241331.1| PREDICTED: hypothetical protein LOC100573065 [Acyrthosiphon pisum]
          Length = 50

 Score = 36.2 bits (83), Expect = 1.6,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 12/19 (63%)

Query: 103 KKEKNFFETRVTEYQQGAE 121
           + E NFFE RV  YQ+ + 
Sbjct: 14  RGETNFFEKRVCYYQKASV 32


>gi|329575047|gb|EGG56599.1| hypothetical protein HMPREF9520_01787 [Enterococcus faecalis
           TX1467]
          Length = 116

 Score = 35.8 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 7/85 (8%)

Query: 28  KEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK 87
            + +     +L+E    E  Y  E      +G      + ++++ AN+    +G++PLF 
Sbjct: 9   DKLKDWMYNLLYELYENEERYTEELYDD--LGWT-EEVKTFLRYNANKALMNLGMDPLFA 65

Query: 88  YTE---NPFPWMSEVIDLKKEKNFF 109
            T    NP   M+ +       +FF
Sbjct: 66  DTANDVNPIV-MNGISTGTSNHDFF 89


>gi|206577235|ref|YP_002236984.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella
           pneumoniae 342]
 gi|206566293|gb|ACI08069.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella
           pneumoniae 342]
          Length = 320

 Score = 35.8 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 10/124 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +          +E +  +  +L +    E+AY+ E   +     
Sbjct: 190 IRDEAVHGYYIGYKYQKGLEIVSPGKREELKNFALDLLMDLYDNELAYSRELYGESGW-- 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
                  ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 248 -FDDVSAFLCYNANKALMNLGYEALFPAEMAAVNPAILAALSPNADENH--DFFSGSGSS 304

Query: 116 YQQG 119
           Y  G
Sbjct: 305 YVIG 308


>gi|260174332|ref|ZP_05760744.1| hypothetical protein BacD2_20921 [Bacteroides sp. D2]
          Length = 153

 Score = 35.8 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 4/64 (6%)

Query: 28  KEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIA-NRRCHQIGLEPLF 86
           K F+  +  +  E   ++  +     P    G +      Y +F+A NRR  +IG+E  +
Sbjct: 88  KLFKTCNVRVCSEEKQVDYCFQCSHFPCENTGFDEHL---YKRFVAINRRMQEIGIEKYY 144

Query: 87  KYTE 90
           +  +
Sbjct: 145 EEVK 148


>gi|310764903|gb|ADP09853.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia sp.
           Ejp617]
          Length = 319

 Score = 35.8 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DE++H  +      +   +   L  +E QQ +  +L E    E+AY  E +  G  G 
Sbjct: 189 IKDEAVHGYYIGYKYQKALEKETPLRKEELQQFAIELLLELYENELAY-TEALYAGV-GW 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKNFFETRVTE 115
                ++++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 247 -QKDVKKFLHYNANKALMNLGYEALFPADMTDVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 304 YVMGKAVDTQDEDWD 318


>gi|315922600|ref|ZP_07918840.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313696475|gb|EFS33310.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 150

 Score = 35.8 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 4/64 (6%)

Query: 28  KEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIA-NRRCHQIGLEPLF 86
           K F+  +  +  E   ++  +     P    G +      Y +F+A NRR  +IG+E  +
Sbjct: 85  KLFKTCNVRVCSEEKQVDYCFQCSHFPCENTGFDEHL---YKRFVAINRRMQEIGIEKYY 141

Query: 87  KYTE 90
           +  +
Sbjct: 142 EEVK 145


>gi|224584592|ref|YP_002638390.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|224469119|gb|ACN46949.1| ribonucleotide-diphosphate reductase beta subunit [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
          Length = 319

 Score = 35.4 bits (81), Expect = 2.4,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          +   +  +E +  +  +L E    EI Y  E +      +
Sbjct: 189 IRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEICY-TEALYAETGWV 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
           N    + ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 248 N--DVKAFLCYNANKALMNLGYEALFPPEIADVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKTVE 311


>gi|20804010|emb|CAD31587.1| PUTATIVE METHYLASPARTATE AMMONIA-LYASE PROTEIN [Mesorhizobium loti
           R7A]
          Length = 423

 Score = 35.4 bits (81), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 34/86 (39%), Gaps = 22/86 (25%)

Query: 34  SRTMLHEATLLEIAYAHETMPKGFV------GLNAPSCEQYMQFIANRRCHQIGLEPLFK 87
              M+ +A         + +P G +      G+N  +  ++++++A RR  +IG      
Sbjct: 186 VDKMILKAV--------DVLPHGLINSRQKFGINGQTFMEFVKWVA-RRTREIGCPGYHP 236

Query: 88  YTENPFP---WMSEVIDL--KKEKNF 108
                F    W+ + I L  +   +F
Sbjct: 237 VLH--FDVYGWIGQEIGLEPQNIADF 260


>gi|254477923|ref|ZP_05091308.1| oligopeptide/dipeptide ABC transporter, permease protein
          [Ruegeria sp. R11]
 gi|214028508|gb|EEB69344.1| oligopeptide/dipeptide ABC transporter, permease protein
          [Ruegeria sp. R11]
          Length = 326

 Score = 35.4 bits (81), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 11/78 (14%)

Query: 10 FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYM 69
          F I +I     +N        ++     + E    ++        +  +GLN     QY+
Sbjct: 17 FAISLIGFAIQDN---LGDPLRELVGQSVSEEVRQQL--------RDELGLNDSFMTQYI 65

Query: 70 QFIANRRCHQIGLEPLFK 87
          +F+ N     +G    FK
Sbjct: 66 RFLGNVLQGDLGTSYFFK 83


>gi|198241755|ref|YP_002216784.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|197936271|gb|ACH73604.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|326624542|gb|EGE30887.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
          Length = 319

 Score = 35.4 bits (81), Expect = 2.5,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          +   +  +E +  +  +L E    EI Y  E +      +
Sbjct: 189 IRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEICY-TEALYAETGWV 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
           N    + ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 248 N--DVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKTVE 311


>gi|62181312|ref|YP_217729.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161615703|ref|YP_001589668.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Paratyphi B str. SPB7]
 gi|167552693|ref|ZP_02346445.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|168822877|ref|ZP_02834877.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|197265553|ref|ZP_03165627.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|205353758|ref|YP_002227559.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|207858077|ref|YP_002244728.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|62128945|gb|AAX66648.1| ribonucleoside-diphosphate reductase 2, beta subunit [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161365067|gb|ABX68835.1| hypothetical protein SPAB_03488 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|197243808|gb|EDY26428.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|205273539|emb|CAR38525.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|205322691|gb|EDZ10530.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205340791|gb|EDZ27555.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|206709880|emb|CAR34233.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|320087214|emb|CBY96980.1| ribonucleoside-diphosphate reductase beta chain [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
 gi|322715798|gb|EFZ07369.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Choleraesuis str. A50]
 gi|326628866|gb|EGE35209.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 9]
          Length = 319

 Score = 35.4 bits (81), Expect = 2.5,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          +   +  +E +  +  +L E    EI Y  E +      +
Sbjct: 189 IRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEICY-TEALYAETGWV 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
           N    + ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 248 N--DVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKTVE 311


>gi|26553540|ref|NP_757474.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
           penetrans HF-2]
 gi|26453546|dbj|BAC43878.1| ribonucleotide diphosphate reductase subunit beta [Mycoplasma
           penetrans HF-2]
          Length = 339

 Score = 35.4 bits (81), Expect = 2.5,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 46/129 (35%), Gaps = 8/129 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RD+ +H  +      +   + P     E ++    +L++   LE  + +E       G 
Sbjct: 209 LRDKVIHNYYSGYKYQKKVAKLPPEKQAEMKKFVFDLLYQVIDLEKEFLNELY----AGF 264

Query: 61  N-APSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEY 116
           N A    ++  + A +    +G +  F   E       ++       +  +FF    + Y
Sbjct: 265 NIADQAIKFSVYNAGKFLQNLGYDSPFTPEETEIKPEIFVQLSARADENHDFFSGSGSSY 324

Query: 117 QQGAELKWD 125
             G   + D
Sbjct: 325 IMGNVEETD 333


>gi|200386806|ref|ZP_03213418.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|199603904|gb|EDZ02449.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
          Length = 319

 Score = 35.4 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          +   +  +E +  +  +L E    EI Y  E +      +
Sbjct: 189 IRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEICY-TEALYAETGWV 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
           N    + ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 248 N--DVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKTVE 311


>gi|168244605|ref|ZP_02669537.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168464072|ref|ZP_02697989.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|194442875|ref|YP_002042053.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194450827|ref|YP_002046771.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194401538|gb|ACF61760.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194409131|gb|ACF69350.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|195633109|gb|EDX51523.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|205336532|gb|EDZ23296.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
          Length = 319

 Score = 35.4 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +          +   +  +E +  +  +L E    EI Y  E +      +
Sbjct: 189 IRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALNLLMELYDNEIRY-TEALYAETGWV 247

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKNFFETRVTE 115
           N    + ++ + AN+    +G E LF       NP     +S   D     +FF    + 
Sbjct: 248 N--DVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENH--DFFSGSGSS 303

Query: 116 YQQGAELK 123
           Y  G  ++
Sbjct: 304 YVMGKTVE 311


>gi|284009251|emb|CBA76360.1| ribonucleoside-diphosphate reductase beta chain [Arsenophonus
           nasoniae]
          Length = 321

 Score = 35.0 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 47/125 (37%), Gaps = 18/125 (14%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H  +      +  I+       E +  +  +L      EI Y+        VG 
Sbjct: 191 IRDEAIHGYYIGYKFQKSLIKYSDKEKDEIKDFAYLLLLNLYENEIKYSESLY--DEVGW 248

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI---------DLKKEKNFFET 111
                ++++ + AN+    +G E LF  T      M++V          +  +  +FF  
Sbjct: 249 T-EDVKKFLHYNANKALMNLGYESLFPET------MTDVSPAILSALSPNANENHDFFSG 301

Query: 112 RVTEY 116
             + Y
Sbjct: 302 SGSSY 306


>gi|312865062|ref|ZP_07725290.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           downei F0415]
 gi|311099173|gb|EFQ57389.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           downei F0415]
          Length = 318

 Score = 35.0 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 6/92 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA-HETMPKGFVG 59
           +R+ESLH  +    +  +  E      K+F+  +R  + +    E        +      
Sbjct: 191 IRNESLHCYYLGHKVKLLLTEVDQDEAKDFENWARDFVDKLVQQEEDLIEDYFLLDDAKS 250

Query: 60  LNAPSCEQYMQFIANRRCHQIGL-EPLFKYTE 90
           L      Q     AN      GL + ++ + +
Sbjct: 251 LAKDLLHQ----EANHILENFGLGQSVYPFVQ 278


>gi|156340310|ref|XP_001620415.1| hypothetical protein NEMVEDRAFT_v1g148226 [Nematostella vectensis]
 gi|156205304|gb|EDO28315.1| predicted protein [Nematostella vectensis]
          Length = 224

 Score = 35.0 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 16/33 (48%), Gaps = 6/33 (18%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKS 34
           RDE +H +F + + N       HL  K  +++ 
Sbjct: 198 RDEGVHCDFAVHIHNH------HLINKVPKERI 224


>gi|3695371|gb|AAC62775.1| DNA gyrase subunit B [Campylobacter jejuni]
          Length = 685

 Score = 35.0 bits (80), Expect = 3.8,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%)

Query: 8   LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63
           L F    +N++         +     +++  + +  +    E A +   +  G  GLN  
Sbjct: 477 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 533

Query: 64  -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107
                  + Y++ +A  R     LE  F        +M E  +L K  N
Sbjct: 534 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 581


>gi|320539491|ref|ZP_08039160.1| putative truncated ribonucleoside-diphosphate reductase 2, beta
           subunit, ferritin-like protein [Serratia symbiotica str.
           Tucson]
 gi|320030616|gb|EFW12626.1| putative truncated ribonucleoside-diphosphate reductase 2, beta
           subunit, ferritin-like protein [Serratia symbiotica str.
           Tucson]
          Length = 309

 Score = 34.6 bits (79), Expect = 4.0,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 3/87 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +R E++H  +      +       +  ++ +  +  +LH+    E+ Y  +      VG 
Sbjct: 193 IRYEAVHGYYIGYKFQKGLERVDVIRRQQVKNVAFDLLHDLYDNEVCYTQDLY--DGVGW 250

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK 87
                + ++ + AN+    +G E LF 
Sbjct: 251 T-EDVKTFLHYNANKALMNLGYEALFP 276


>gi|149194971|ref|ZP_01872064.1| glutamyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149134892|gb|EDM23375.1| glutamyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 461

 Score = 34.6 bits (79), Expect = 4.1,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 23/112 (20%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RD     +FGID+IN  K E   +   E +++ +T+   A  +E       +       
Sbjct: 320 LRD-----DFGIDIINHDKKE---ILIDELKERVKTLKEMAEEIEK------ILTPPTSY 365

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENP-FP--W---MSEVIDLKKEK 106
           N    + Y +FI +     +     F   ++P  P  W   M E + LK  K
Sbjct: 366 NE---KAYKKFIKDEVIENLKEFVKFLEDKDPKLPNEWHDVMDEFLKLKNIK 414


>gi|307746967|gb|ADN90237.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni M1]
 gi|315931303|gb|EFV10272.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 327]
          Length = 769

 Score = 34.6 bits (79), Expect = 4.2,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%)

Query: 8   LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63
           L F    +N++         +     +++  + +  +    E A +   +  G  GLN  
Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562

Query: 64  -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107
                  + Y++ +A  R     LE  F        +M E  +L K  N
Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610


>gi|205355744|ref|ZP_03222514.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni CG8421]
 gi|205346521|gb|EDZ33154.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 769

 Score = 34.6 bits (79), Expect = 4.2,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%)

Query: 8   LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63
           L F    +N++         +     +++  + +  +    E A +   +  G  GLN  
Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562

Query: 64  -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107
                  + Y++ +A  R     LE  F        +M E  +L K  N
Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610


>gi|148926822|ref|ZP_01810501.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni CG8486]
 gi|145844547|gb|EDK21654.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni CG8486]
          Length = 769

 Score = 34.6 bits (79), Expect = 4.2,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%)

Query: 8   LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63
           L F    +N++         +     +++  + +  +    E A +   +  G  GLN  
Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562

Query: 64  -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107
                  + Y++ +A  R     LE  F        +M E  +L K  N
Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610


>gi|153951349|ref|YP_001397276.1| DNA gyrase subunit B [Campylobacter jejuni subsp. doylei 269.97]
 gi|152938795|gb|ABS43536.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. doylei 269.97]
          Length = 769

 Score = 34.6 bits (79), Expect = 4.2,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%)

Query: 8   LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63
           L F    +N++         +     +++  + +  +    E A +   +  G  GLN  
Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562

Query: 64  -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107
                  + Y++ +A  R     LE  F        +M E  +L K  N
Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610


>gi|86153959|ref|ZP_01072161.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|85842497|gb|EAQ59710.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni HB93-13]
          Length = 769

 Score = 34.6 bits (79), Expect = 4.2,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%)

Query: 8   LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63
           L F    +N++         +     +++  + +  +    E A +   +  G  GLN  
Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562

Query: 64  -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107
                  + Y++ +A  R     LE  F        +M E  +L K  N
Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610


>gi|88597733|ref|ZP_01100966.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218561696|ref|YP_002343475.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|9297098|sp|O87667|GYRB_CAMJE RecName: Full=DNA gyrase subunit B
 gi|88190037|gb|EAQ94013.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112359402|emb|CAL34184.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|284925306|gb|ADC27658.1| DNA gyrase B subunit [Campylobacter jejuni subsp. jejuni IA3902]
 gi|315928458|gb|EFV07770.1| DNA gyrase B subunit [Campylobacter jejuni subsp. jejuni DFVF1099]
 gi|315930330|gb|EFV09418.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 305]
          Length = 769

 Score = 34.6 bits (79), Expect = 4.2,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%)

Query: 8   LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63
           L F    +N++         +     +++  + +  +    E A +   +  G  GLN  
Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562

Query: 64  -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107
                  + Y++ +A  R     LE  F        +M E  +L K  N
Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610


>gi|57236917|ref|YP_178032.1| DNA gyrase subunit B [Campylobacter jejuni RM1221]
 gi|57165721|gb|AAW34500.1| DNA gyrase, B subunit [Campylobacter jejuni RM1221]
          Length = 769

 Score = 34.6 bits (79), Expect = 4.3,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%)

Query: 8   LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63
           L F    +N++         +     +++  + +  +    E A +   +  G  GLN  
Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562

Query: 64  -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107
                  + Y++ +A  R     LE  F        +M E  +L K  N
Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610


>gi|86150547|ref|ZP_01068771.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|86152360|ref|ZP_01070570.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 260.94]
 gi|121612557|ref|YP_999722.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 81-176]
 gi|167004699|ref|ZP_02270457.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 81-176]
 gi|315123619|ref|YP_004065623.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85838999|gb|EAQ56264.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85840657|gb|EAQ57909.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 260.94]
 gi|87249029|gb|EAQ71991.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 81-176]
 gi|315017341|gb|ADT65434.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 769

 Score = 34.6 bits (79), Expect = 4.3,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%)

Query: 8   LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63
           L F    +N++         +     +++  + +  +    E A +   +  G  GLN  
Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562

Query: 64  -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107
                  + Y++ +A  R     LE  F        +M E  +L K  N
Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610


>gi|48094245|gb|AAT40430.1| DNA gyrase subunit B [Campylobacter jejuni]
 gi|315057444|gb|ADT71773.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni S3]
          Length = 769

 Score = 34.6 bits (79), Expect = 4.3,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%)

Query: 8   LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63
           L F    +N++         +     +++  + +  +    E A +   +  G  GLN  
Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562

Query: 64  -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107
                  + Y++ +A  R     LE  F        +M E  +L K  N
Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610


>gi|85057306|ref|YP_456222.1| ribonucleotide-diphosphate reductase subunit beta [Aster yellows
           witches'-broom phytoplasma AYWB]
 gi|84789411|gb|ABC65143.1| ribonucleoside-diphosphate reductase beta chain [Aster yellows
           witches'-broom phytoplasma AYWB]
          Length = 350

 Score = 34.6 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 51/120 (42%), Gaps = 7/120 (5%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H       + ++  E   L+ K  +Q  +T L +            +   +  L
Sbjct: 223 IRDESIHGV----YVGRLATELYQLFDKPTKQTLKTWLDDLMQQLYQTKTSLVNAIYHKL 278

Query: 61  N-APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
           N      +++++ AN+    +G +  F  +EN  P +   ++ + +  + F  +   YQ+
Sbjct: 279 NLEDDVNKFVRYNANKALMNLGFDAFFP-SENVNPVIINGLNTETKTMDNFSMKGNGYQK 337


>gi|157414325|ref|YP_001481581.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 81116]
 gi|157385289|gb|ABV51604.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 81116]
          Length = 769

 Score = 34.6 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%)

Query: 8   LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63
           L F    +N++         +     +++  + +  +    E A +   +  G  GLN  
Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562

Query: 64  -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107
                  + Y++ +A  R     LE  F        +M E  +L K  N
Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKANN 610


>gi|292489180|ref|YP_003532067.1| ribonucleoside-diphosphate reductase 2 subunit beta [Erwinia
           amylovora CFBP1430]
 gi|292900297|ref|YP_003539666.1| ribonucleoside-diphosphate reductase 2 subunit beta [Erwinia
           amylovora ATCC 49946]
 gi|291200145|emb|CBJ47271.1| ribonucleoside-diphosphate reductase 2 beta chain [Erwinia
           amylovora ATCC 49946]
 gi|291554614|emb|CBA22274.1| ribonucleoside-diphosphate reductase 2 beta chain [Erwinia
           amylovora CFBP1430]
          Length = 319

 Score = 34.6 bits (79), Expect = 4.6,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DE++H  +      +   +      +E QQ +  +L E    E+AY  + +  G  G 
Sbjct: 189 IKDEAVHGYYIGYKYQKALEKETPQRKEELQQFAIELLLELYENELAY-TDALYSGV-GW 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN--FFETRVTE 115
                ++++ + AN+    +G E LF       NP   +   +    ++N  FF    + 
Sbjct: 247 -QEDVKKFLHYNANKALMNLGYEALFPAEMTDVNPA--ILAALSPNADENHDFFSGSGSS 303

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 304 YVMGKAVDTEDEDWD 318


>gi|312173339|emb|CBX81594.1| ribonucleoside-diphosphate reductase 2 beta chain [Erwinia
           amylovora ATCC BAA-2158]
          Length = 319

 Score = 34.6 bits (79), Expect = 4.7,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DE++H  +      +   +      +E QQ +  +L E    E+AY  + +  G  G 
Sbjct: 189 IKDEAVHGYYIGYKYQKALEKETPQRKEELQQFAIELLLELYENELAY-TDALYSGV-GW 246

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN--FFETRVTE 115
                ++++ + AN+    +G E LF       NP   +   +    ++N  FF    + 
Sbjct: 247 -QEDVKKFLHYNANKALMNLGYEALFPAEMTDVNPA--ILAALSPNADENHDFFSGSGSS 303

Query: 116 YQQGAEL-----KWD 125
           Y  G  +      WD
Sbjct: 304 YVMGKAVDTEDEDWD 318


>gi|283956181|ref|ZP_06373666.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792335|gb|EFC31119.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 1336]
          Length = 769

 Score = 34.6 bits (79), Expect = 4.8,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%)

Query: 8   LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63
           L F    +N++         +     +++  + +  +    E A +   +  G  GLN  
Sbjct: 506 LTFFFRFMNELVTNGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562

Query: 64  -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107
                  + Y++ +A  R     LE  F        +M E  +L K  N
Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610


>gi|115927347|ref|XP_001199693.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115964649|ref|XP_001179170.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 243

 Score = 34.6 bits (79), Expect = 4.9,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 25/66 (37%), Gaps = 13/66 (19%)

Query: 5   SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPS 64
           SLHL+    +  +  ++       +  ++    + EA  +E          G  G++   
Sbjct: 142 SLHLDAACGLFTEELMDEGGKCDPDVIEEV---MDEADEIE----------GLGGIDGEK 188

Query: 65  CEQYMQ 70
            E Y++
Sbjct: 189 IEDYLE 194


>gi|258508120|ref|YP_003170871.1| phage-related terminase large subunit [Lactobacillus rhamnosus GG]
 gi|257148047|emb|CAR87020.1| Phage-related terminase, large subunit [Lactobacillus rhamnosus GG]
          Length = 453

 Score = 34.6 bits (79), Expect = 5.2,   Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 17/25 (68%), Gaps = 1/25 (4%)

Query: 86  FKYTENPFPWMSEVID-LKKEKNFF 109
           +   +NP+ W++E ID ++ + +FF
Sbjct: 173 YNPPKNPYDWINEWIDSVRGDPDFF 197


>gi|259649436|dbj|BAI41598.1| phage terminase large subunit [Lactobacillus rhamnosus GG]
          Length = 446

 Score = 34.2 bits (78), Expect = 5.3,   Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 17/25 (68%), Gaps = 1/25 (4%)

Query: 86  FKYTENPFPWMSEVID-LKKEKNFF 109
           +   +NP+ W++E ID ++ + +FF
Sbjct: 166 YNPPKNPYDWINEWIDSVRGDPDFF 190


>gi|229542954|ref|ZP_04432014.1| Na+/H+ antiporter [Bacillus coagulans 36D1]
 gi|229327374|gb|EEN93049.1| Na+/H+ antiporter [Bacillus coagulans 36D1]
          Length = 679

 Score = 34.2 bits (78), Expect = 6.0,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 9   NFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQY 68
           +   ++++Q+K E   + + EF++       +A   E  Y +  M    +  +      +
Sbjct: 459 DNYQNMLHQLKAEESEIDSLEFKRIETETRMKALEAETEYINALMKSKRI--DQEMAFLF 516

Query: 69  MQFI 72
           +++I
Sbjct: 517 LEYI 520


>gi|241895721|ref|ZP_04783017.1| ribonucleotide-diphosphate reductase subunit beta [Weissella
           paramesenteroides ATCC 33313]
 gi|241871088|gb|EER74839.1| ribonucleotide-diphosphate reductase subunit beta [Weissella
           paramesenteroides ATCC 33313]
          Length = 318

 Score = 34.2 bits (78), Expect = 6.3,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 40/112 (35%), Gaps = 7/112 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H  +          E       E +     +L +    E  Y         +G 
Sbjct: 188 LRDESVHGTYIGYKFQLGFNELSTDEQNELKTWLYDLLLDLYGNEEKYTKLLY--DEIGW 245

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFF 109
              S   ++++ AN+    +G +PLF       NP   M+ +       +FF
Sbjct: 246 T-ESVLTFLRYNANKALMNLGQDPLFPDGAEDVNPIV-MNGISTTTSNHDFF 295


>gi|157310978|ref|YP_001468974.1| putative ribonucleotide reductase [Corynebacterium phage P1201]
 gi|95832126|gb|ABF57526.1| putative ribonucleotide reductase [Corynebacterium phage P1201]
          Length = 237

 Score = 34.2 bits (78), Expect = 6.6,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 48/128 (37%), Gaps = 18/128 (14%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDE +H  +      ++            +++   +     + EI    E      +GL
Sbjct: 108 MRDEGVHGYYLGYKFQKVMEGALPYERDAVKERVTNLACRLFVNEIPLIEEIY--EPLGL 165

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEV---------IDLKKEKNFFET 111
           +A   + ++++  N+    +GLE +F         M+ V         +D ++  +FF  
Sbjct: 166 SAQ-VQTFLRYNLNKAMQNLGLENVFPAE------MTRVEPRILSQLSVDSEETHDFFSG 218

Query: 112 RVTEYQQG 119
             + Y  G
Sbjct: 219 SGSSYVIG 226


>gi|223040875|ref|ZP_03611139.1| conserved hypothetical protein [Campylobacter rectus RM3267]
 gi|222877837|gb|EEF12954.1| conserved hypothetical protein [Campylobacter rectus RM3267]
          Length = 743

 Score = 34.2 bits (78), Expect = 6.8,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 35/87 (40%), Gaps = 8/87 (9%)

Query: 12  IDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQF 71
           ++++      +  + ++  Q+  + +  EA   E  +         +GL+A   +  ++ 
Sbjct: 481 VNLVKDYASVSKFILSRAEQENVKNIFKEAVKDEEIFKIYA----QLGLSAELVKSELEK 536

Query: 72  IANRRCHQIGLEPL--FKYTENPFPWM 96
           IAN     IG   +  F   +N   ++
Sbjct: 537 IAN--AKIIGASEILEFDAAKNLTRFL 561


>gi|269865568|ref|XP_002651969.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063399|gb|EED42087.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 251

 Score = 33.9 bits (77), Expect = 7.2,   Method: Composition-based stats.
 Identities = 7/20 (35%), Positives = 10/20 (50%)

Query: 2   RDESLHLNFGIDVINQIKIE 21
           RDE LH +F   +   I  +
Sbjct: 219 RDEGLHTDFACLLHKYINNK 238


>gi|283953662|ref|ZP_06371193.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 414]
 gi|283794703|gb|EFC33441.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 414]
          Length = 769

 Score = 33.9 bits (77), Expect = 7.3,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 25/68 (36%), Gaps = 6/68 (8%)

Query: 45  EIAYAHETMPKGFVGLNAP-----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEV 99
           E A +   +  G  GLN         + Y++ +A  R     LE  F        +M E 
Sbjct: 544 EKALSEYLIETGIEGLNYEGIGMNDLKDYLKIVAAYRVILKDLEKRFNVIS-VIRYMIEN 602

Query: 100 IDLKKEKN 107
            +L K  N
Sbjct: 603 SNLVKGNN 610


>gi|115927349|ref|XP_001199705.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115964647|ref|XP_001179103.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 135

 Score = 33.9 bits (77), Expect = 7.5,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 25/66 (37%), Gaps = 13/66 (19%)

Query: 5  SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPS 64
          SLHL+    +  +  ++       +  ++    + EA  +E          G  G++   
Sbjct: 34 SLHLDAACGLFMEELMDEGGKCDPDVIEEV---MDEADEIE----------GLGGIDGEK 80

Query: 65 CEQYMQ 70
           E Y++
Sbjct: 81 IEDYLE 86


>gi|39938541|ref|NP_950307.1| ribonucleotide-diphosphate reductase subunit beta [Onion yellows
           phytoplasma OY-M]
 gi|39721650|dbj|BAD04140.1| ribonucleotide reductase beta subunit [Onion yellows phytoplasma
           OY-M]
          Length = 350

 Score = 33.9 bits (77), Expect = 7.7,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 9/121 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDES+H       + ++  E   L+ K  QQ  +T L +        A  ++       
Sbjct: 223 IRDESIHGV----YVGRLATEIYQLFDKPTQQTLKTWLDDLMQQLYQ-AQTSLVHAIYHK 277

Query: 60  LN-APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117
           LN      +++++ AN+    +G +  F  +EN  P +   ++ + +  + F  +   YQ
Sbjct: 278 LNLEDDVNKFVRYNANKALMNLGFDAFFP-SENVNPVIINGLNTETKTMDNFSMKGNGYQ 336

Query: 118 Q 118
           +
Sbjct: 337 K 337


>gi|268320098|ref|YP_003293754.1| ribonucleoside-diphosphate reductase beta chain [Lactobacillus
           johnsonii FI9785]
 gi|262398473|emb|CAX67487.1| ribonucleoside-diphosphate reductase beta chain [Lactobacillus
           johnsonii FI9785]
          Length = 313

 Score = 33.9 bits (77), Expect = 8.4,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 31/102 (30%), Gaps = 10/102 (9%)

Query: 10  FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYM 69
           F  D     K E   +           +       E+++         +       E Y+
Sbjct: 204 FRRDFFKLSKKEQNKVH-----DWVYDLCDNLYDNELSHIKLLYQNTDL---EDKVEHYI 255

Query: 70  QFIANRRCHQIGLEPLFKYTENPFPWM--SEVIDLKKEKNFF 109
            +  N+    +G EP +         +  + +++    K+FF
Sbjct: 256 HYTLNKALMNLGQEPKYPENVETLDPILTTGLMESAMIKDFF 297


>gi|15242638|ref|NP_198845.1| metal-dependent phosphohydrolase HD domain-containing protein
           [Arabidopsis thaliana]
 gi|332007147|gb|AED94530.1| metal-dependent phosphohydrolase HD domain-containing protein
           [Arabidopsis thaliana]
          Length = 448

 Score = 33.9 bits (77), Expect = 8.6,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 37/96 (38%), Gaps = 10/96 (10%)

Query: 12  IDVINQIKIENPHLWTKEFQQKSRTMLHEATLL-------EIAYAHETMPKGFVGLNAPS 64
           I++I+ I   +      +  ++ + M+  +T +       E  + ++ +  G  G++   
Sbjct: 144 INMIDYIVDTHHIDVDAKMLKRVKDMILASTEVSELKGNAEKRFLYDIVANGRNGIDVDK 203

Query: 65  CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
              Y+  + + R   +G    F+    P   +   I
Sbjct: 204 F-DYI--VRDSRACGLGCNFQFQRLTEPMRVIDNEI 236


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.312    0.178    0.630 

Lambda     K      H
   0.267   0.0552    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,978,963,137
Number of Sequences: 14124377
Number of extensions: 138775062
Number of successful extensions: 319239
Number of sequences better than 10.0: 2476
Number of HSP's better than 10.0 without gapping: 3038
Number of HSP's successfully gapped in prelim test: 1157
Number of HSP's that attempted gapping in prelim test: 311350
Number of HSP's gapped (non-prelim): 4343
length of query: 125
length of database: 4,842,793,630
effective HSP length: 91
effective length of query: 34
effective length of database: 3,557,475,323
effective search space: 120954160982
effective search space used: 120954160982
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.0 bits)
S2: 77 (33.8 bits)