BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254781007|ref|YP_003065420.1| hypothetical protein CLIBASIA_04540 [Candidatus Liberibacter asiaticus str. psy62] (411 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254781007|ref|YP_003065420.1| hypothetical protein CLIBASIA_04540 [Candidatus Liberibacter asiaticus str. psy62] gi|254040684|gb|ACT57480.1| hypothetical protein CLIBASIA_04540 [Candidatus Liberibacter asiaticus str. psy62] Length = 411 Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust. Identities = 411/411 (100%), Positives = 411/411 (100%) Query: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTAWLQEVLDHV 60 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTAWLQEVLDHV Sbjct: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTAWLQEVLDHV 60 Query: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNTGSIESIVKDAVILTKNVNSL 120 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNTGSIESIVKDAVILTKNVNSL Sbjct: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNTGSIESIVKDAVILTKNVNSL 120 Query: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA Sbjct: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180 Query: 181 SRGKVADSKVHPPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYSSILYWAVG 240 SRGKVADSKVHPPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYSSILYWAVG Sbjct: 181 SRGKVADSKVHPPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYSSILYWAVG 240 Query: 241 TLTYSVDNKTTTREYYKDPYYATWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300 TLTYSVDNKTTTREYYKDPYYATWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA Sbjct: 241 TLTYSVDNKTTTREYYKDPYYATWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300 Query: 301 SQNKYMLMLAIGNQLSRSSVEKEKIEKVLQDCHYMHKRHRTGRDAITIFSVGFSPDQDTR 360 SQNKYMLMLAIGNQLSRSSVEKEKIEKVLQDCHYMHKRHRTGRDAITIFSVGFSPDQDTR Sbjct: 301 SQNKYMLMLAIGNQLSRSSVEKEKIEKVLQDCHYMHKRHRTGRDAITIFSVGFSPDQDTR 360 Query: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDSWRR 411 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDSWRR Sbjct: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDSWRR 411 >gi|254780914|ref|YP_003065327.1| hypothetical protein CLIBASIA_04065 [Candidatus Liberibacter asiaticus str. psy62] gi|254780929|ref|YP_003065342.1| hypothetical protein CLIBASIA_04140 [Candidatus Liberibacter asiaticus str. psy62] gi|254040591|gb|ACT57387.1| hypothetical protein CLIBASIA_04065 [Candidatus Liberibacter asiaticus str. psy62] gi|254040606|gb|ACT57402.1| hypothetical protein CLIBASIA_04140 [Candidatus Liberibacter asiaticus str. psy62] Length = 408 Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust. Identities = 407/408 (99%), Positives = 407/408 (99%) Query: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTAWLQEVLDHV 60 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTAWLQEVLDHV Sbjct: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTAWLQEVLDHV 60 Query: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNTGSIESIVKDAVILTKNVNSL 120 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSN GSIESIVKDAVILTKNVNSL Sbjct: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120 Query: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA Sbjct: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180 Query: 181 SRGKVADSKVHPPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYSSILYWAVG 240 SRGKVADSKVHPPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYSSILYWAVG Sbjct: 181 SRGKVADSKVHPPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYSSILYWAVG 240 Query: 241 TLTYSVDNKTTTREYYKDPYYATWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300 TLTYSVDNKTTTREYYKDPYYATWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA Sbjct: 241 TLTYSVDNKTTTREYYKDPYYATWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300 Query: 301 SQNKYMLMLAIGNQLSRSSVEKEKIEKVLQDCHYMHKRHRTGRDAITIFSVGFSPDQDTR 360 SQNKYMLMLAIGNQLSRSSVEKEKIEKVLQDCHYMHKRHRTGRDAITIFSVGFSPDQDTR Sbjct: 301 SQNKYMLMLAIGNQLSRSSVEKEKIEKVLQDCHYMHKRHRTGRDAITIFSVGFSPDQDTR 360 Query: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS Sbjct: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408 >gi|254780135|ref|YP_003064548.1| hypothetical protein CLIBASIA_00070 [Candidatus Liberibacter asiaticus str. psy62] gi|254039812|gb|ACT56608.1| hypothetical protein CLIBASIA_00070 [Candidatus Liberibacter asiaticus str. psy62] Length = 408 Score = 743 bits (1917), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/408 (91%), Positives = 380/408 (93%) Query: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTAWLQEVLDHV 60 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTA LQEVLDHV Sbjct: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHV 60 Query: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNTGSIESIVKDAVILTKNVNSL 120 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSN GSIESIVKDAVILTKNVNSL Sbjct: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120 Query: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA Sbjct: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180 Query: 181 SRGKVADSKVHPPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYSSILYWAVG 240 SRGKVADS+VH PKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHY SI YWA Sbjct: 181 SRGKVADSQVHRPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYKSIFYWAFE 240 Query: 241 TLTYSVDNKTTTREYYKDPYYATWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300 Y DN ++D Y TWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA Sbjct: 241 NFQYHQDNNMLIFYSHRDFYRITWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300 Query: 301 SQNKYMLMLAIGNQLSRSSVEKEKIEKVLQDCHYMHKRHRTGRDAITIFSVGFSPDQDTR 360 S +KYMLM AIGNQLSRSSV KE I+++LQDC+YMHK HRTGR AITIFSVGFSPDQDTR Sbjct: 301 SHSKYMLMFAIGNQLSRSSVGKETIDRILQDCYYMHKHHRTGRGAITIFSVGFSPDQDTR 360 Query: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS Sbjct: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408 >gi|315122409|ref|YP_004062898.1| hypothetical protein CKC_03305 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495811|gb|ADR52410.1| hypothetical protein CKC_03305 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 411 Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 140/416 (33%), Positives = 221/416 (53%), Gaps = 21/416 (5%) Query: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTAWLQEVLDHV 60 MF +NFL RL CT G FL+++A+LLSSF+ I+D++ D +++ LQ +D+ Sbjct: 1 MFYYRNFLSVFSRLNHCTNGSFLIVSAVLLSSFLTIMDIMRDYTDMIRVRNMLQSSIDYA 60 Query: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNTGSIESIVKDAVILTKNVNSL 120 ++ +P L R+ I+ +I L++ L I+ IV + + + Sbjct: 61 LH-NNPNELSVGTIKQREMLIKKRIGYFLDSNYKGTLLTEEQIKLIVNQSTVSITERSFY 119 Query: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180 P QF ++I L +QL+ +L M K +IS+RK +YK+N+ LM++PF W G W+ Sbjct: 120 PQQFHINIELHKNIQLKSLILHMAMNPKKDFNISQRKSSLYKKNVALMVVPFTWTGEWIP 179 Query: 181 SR---GKVADSKVHPPKYLEYSHYYQ-QYLN-RNTLVKNFLSQIPYKNFCMAPYHYSSIL 235 + S+ P L+ H+ + +Y N RN K FLS+I N C+APYHYS+I+ Sbjct: 180 PSLFTTQFTVSQDLLPSDLKTEHFKKTEYFNKRNQFFKMFLSKIKENNLCIAPYHYSAIV 239 Query: 236 YWAVGTLTYSVDNKTT----TREYYKDPYYATWDHFPYSFIKNVF---DMTSNQFGDGQV 288 YW+ G +Y + TT R+ Y Y WD P ++I ++F ++ SN+ Sbjct: 240 YWSEGIFSYKLPFSTTFLYSFRDIYVKQYSTIWDMKPSNYILDLFAGAELHSNR------ 293 Query: 289 LTNTNHCFPHGASQNKYMLMLAIGNQLSRSSVEKEKIEKVLQDCHYMHKRH-RTGRDAIT 347 LT + CF G Q K+ML++A GNQ+S E K+ C M K + ++ IT Sbjct: 294 LTPADPCFRRGVIQKKFMLIIAAGNQISDRKNSAEYF-KMKHGCTLMGKNMGKNPQEEIT 352 Query: 348 IFSVGFSPDQDTRYTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTI 403 ++S+G SPD DT+ L QC P +YYEI S +++ P+ L RN+ + W F+I Sbjct: 353 VYSLGISPDPDTKRDLIQCTRHPDRYYEIQSYKDIAPVIDRLERNISSVWNDGFSI 408 >gi|294875617|ref|XP_002767406.1| synaptojanin, putative [Perkinsus marinus ATCC 50983] gi|239868969|gb|EER00124.1| synaptojanin, putative [Perkinsus marinus ATCC 50983] Length = 805 Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 27/127 (21%) Query: 62 YRTSPKNLYDLREA---GRDNFIRHQIEKALNTYNSRDLSNTGSIESIVKDAVILTKNVN 118 Y +SP L D +A GR + +R A YN R L + G + + V+ ++L Sbjct: 242 YISSPTPLSDYLDAILIGRRSCLR-----AGTRYNHRGLDDLGDVANFVETELLLCNR-- 294 Query: 119 SLPLQFTVDIALSTTVQLRGSLLQMFSQSKG------KVDISRRKKVM---YKQNIGLMI 169 D+ L+ +Q+RGS+ +SQ+ G ++DI+R K++ Y ++I +I Sbjct: 295 --------DVVLAAHIQIRGSVPVFWSQNPGSNSSTQQLDITRSKEMTVLGYDKHISSLI 346 Query: 170 MPFAWDG 176 + DG Sbjct: 347 KRYGPDG 353 >gi|197386168|ref|NP_001127975.1| calmodulin regulated spectrin-associated protein 1-like 1 [Rattus norvegicus] gi|149058504|gb|EDM09661.1| similar to KIAA1078 protein (predicted) [Rattus norvegicus] Length = 1470 Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 9/76 (11%) Query: 268 PYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGASQNKYMLMLAIGNQLSRSSVEKEKIEK 327 P+ +K+ +++N+ + NT+H P+GA QN+ +L+ GNQ +E IE+ Sbjct: 488 PHGDLKSYMPLSTNELNSNE---NTHHKLPNGALQNR-VLLDEFGNQ-----IETPSIEE 538 Query: 328 VLQDCHYMHKRHRTGR 343 LQ H K T R Sbjct: 539 ALQIIHDTEKPPHTAR 554 >gi|90420284|ref|ZP_01228192.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] gi|90335618|gb|EAS49368.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] Length = 593 Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%) Query: 314 QLSRSSVEKEKIEKVLQDCHYMHK--RHRTGRDAITIFSVGFSPDQDT--RYTLRQCAS- 368 + +RSS EKV C + R TG D I IF++ F + + + + QCAS Sbjct: 497 RANRSSFVSAMNEKVAAICQNIKDDGRKATGEDGIVIFTIAFDLNDGSSVKKLMEQCASY 556 Query: 369 ---DPSK--YYEINSDENVMPIAKSLARNV 393 DP+K YY+ S ++M S+ V Sbjct: 557 GITDPTKKLYYDAKSSSDLMAAFDSITEQV 586 >gi|315122199|ref|YP_004062688.1| hypothetical protein CKC_02245 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495601|gb|ADR52200.1| hypothetical protein CKC_02245 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 463 Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 25/44 (56%) Query: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQV 44 M NK+ RLKKC G F VI+A+LL ++ +++D V Sbjct: 1 MVFNKSLFFNFKRLKKCYNGSFFVISALLLPVIFMVIGLLIDLV 44 >gi|110634434|ref|YP_674642.1| hypothetical protein Meso_2084 [Mesorhizobium sp. BNC1] gi|110285418|gb|ABG63477.1| conserved hypothetical protein [Chelativorans sp. BNC1] Length = 549 Score = 37.0 bits (84), Expect = 5.5, Method: Compositional matrix adjust. Identities = 31/141 (21%), Positives = 64/141 (45%), Gaps = 5/141 (3%) Query: 257 KDPYYATWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGASQNKYMLMLAIGNQLS 316 ++P+ T P S ++ + + ++ + + N NH S Y++ + + S Sbjct: 406 REPF--TEGKEPASDVEKIMIVLTDGANNMGLSNNRNHALGSSYSSFGYLVEDRLTRERS 463 Query: 317 RSSVEKEKIEKVLQDCHYMHKRHRTGR-DAITIFSVGFS-PDQDTRYTLRQCASDPSKYY 374 + V +E + L C + + + D +TI+++ PD T L++CA+ P Y+ Sbjct: 464 QRRVTEEMNRRTLAACENAKREYTPSKEDDVTIYTIRLEEPDVATGTLLQECATGPGYYF 523 Query: 375 EINSDENVMPIAKSLARNVIT 395 + S + I K + R+ IT Sbjct: 524 DSPSRTQLNAIFKEI-RDGIT 543 >gi|126731764|ref|ZP_01747569.1| hypothetical protein SSE37_00930 [Sagittula stellata E-37] gi|126707930|gb|EBA06991.1| hypothetical protein SSE37_00930 [Sagittula stellata E-37] Length = 648 Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 15/71 (21%) Query: 19 RGVFLVITAILLSSFV-------------AIVDVVVDQVTVMQKTAWLQEVLDHVIYRTS 65 RGV+L++T++L+ F+ +IVD+V+ +TV+ W+ + + + I+R S Sbjct: 50 RGVYLMLTSVLV--FLLYPAHGRSPTHRPSIVDLVLIGLTVLSIGYWIDQYVSYAIFRVS 107 Query: 66 PKNLYDLREAG 76 N YDL G Sbjct: 108 SPNQYDLVMGG 118 >gi|291225015|ref|XP_002732495.1| PREDICTED: UDP-glucose pyrophosphorylase 2-like [Saccoglossus kowalevskii] Length = 517 Score = 36.6 bits (83), Expect = 7.7, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 11/82 (13%) Query: 325 IEKVLQDCHYMHKRHRTGRDAITIFSVGFSPDQDTRYTLRQCAS--------DPSKYYEI 376 ++ +Q +++K++ G D + F+ D+DT LR+ S + SKY I Sbjct: 150 LDLAVQQIEHLNKKY--GSDVPLVLMNSFNTDEDTNKVLRKYDSCQVQISTFNQSKYPRI 207 Query: 377 NSDENVMPIAKSLARNVITNWF 398 N D +++PIAKS++ + + W+ Sbjct: 208 NKD-SLLPIAKSVSSDDLEAWY 228 Searching..................................................done Results from round 2 CONVERGED! >gi|254781007|ref|YP_003065420.1| hypothetical protein CLIBASIA_04540 [Candidatus Liberibacter asiaticus str. psy62] gi|254040684|gb|ACT57480.1| hypothetical protein CLIBASIA_04540 [Candidatus Liberibacter asiaticus str. psy62] Length = 411 Score = 718 bits (1853), Expect = 0.0, Method: Composition-based stats. Identities = 411/411 (100%), Positives = 411/411 (100%) Query: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTAWLQEVLDHV 60 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTAWLQEVLDHV Sbjct: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTAWLQEVLDHV 60 Query: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNTGSIESIVKDAVILTKNVNSL 120 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNTGSIESIVKDAVILTKNVNSL Sbjct: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNTGSIESIVKDAVILTKNVNSL 120 Query: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA Sbjct: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180 Query: 181 SRGKVADSKVHPPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYSSILYWAVG 240 SRGKVADSKVHPPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYSSILYWAVG Sbjct: 181 SRGKVADSKVHPPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYSSILYWAVG 240 Query: 241 TLTYSVDNKTTTREYYKDPYYATWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300 TLTYSVDNKTTTREYYKDPYYATWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA Sbjct: 241 TLTYSVDNKTTTREYYKDPYYATWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300 Query: 301 SQNKYMLMLAIGNQLSRSSVEKEKIEKVLQDCHYMHKRHRTGRDAITIFSVGFSPDQDTR 360 SQNKYMLMLAIGNQLSRSSVEKEKIEKVLQDCHYMHKRHRTGRDAITIFSVGFSPDQDTR Sbjct: 301 SQNKYMLMLAIGNQLSRSSVEKEKIEKVLQDCHYMHKRHRTGRDAITIFSVGFSPDQDTR 360 Query: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDSWRR 411 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDSWRR Sbjct: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDSWRR 411 >gi|254780914|ref|YP_003065327.1| hypothetical protein CLIBASIA_04065 [Candidatus Liberibacter asiaticus str. psy62] gi|254780929|ref|YP_003065342.1| hypothetical protein CLIBASIA_04140 [Candidatus Liberibacter asiaticus str. psy62] gi|254040591|gb|ACT57387.1| hypothetical protein CLIBASIA_04065 [Candidatus Liberibacter asiaticus str. psy62] gi|254040606|gb|ACT57402.1| hypothetical protein CLIBASIA_04140 [Candidatus Liberibacter asiaticus str. psy62] Length = 408 Score = 711 bits (1834), Expect = 0.0, Method: Composition-based stats. Identities = 407/408 (99%), Positives = 407/408 (99%) Query: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTAWLQEVLDHV 60 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTAWLQEVLDHV Sbjct: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTAWLQEVLDHV 60 Query: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNTGSIESIVKDAVILTKNVNSL 120 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSN GSIESIVKDAVILTKNVNSL Sbjct: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120 Query: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA Sbjct: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180 Query: 181 SRGKVADSKVHPPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYSSILYWAVG 240 SRGKVADSKVHPPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYSSILYWAVG Sbjct: 181 SRGKVADSKVHPPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYSSILYWAVG 240 Query: 241 TLTYSVDNKTTTREYYKDPYYATWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300 TLTYSVDNKTTTREYYKDPYYATWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA Sbjct: 241 TLTYSVDNKTTTREYYKDPYYATWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300 Query: 301 SQNKYMLMLAIGNQLSRSSVEKEKIEKVLQDCHYMHKRHRTGRDAITIFSVGFSPDQDTR 360 SQNKYMLMLAIGNQLSRSSVEKEKIEKVLQDCHYMHKRHRTGRDAITIFSVGFSPDQDTR Sbjct: 301 SQNKYMLMLAIGNQLSRSSVEKEKIEKVLQDCHYMHKRHRTGRDAITIFSVGFSPDQDTR 360 Query: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS Sbjct: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408 >gi|254780135|ref|YP_003064548.1| hypothetical protein CLIBASIA_00070 [Candidatus Liberibacter asiaticus str. psy62] gi|254039812|gb|ACT56608.1| hypothetical protein CLIBASIA_00070 [Candidatus Liberibacter asiaticus str. psy62] Length = 408 Score = 666 bits (1719), Expect = 0.0, Method: Composition-based stats. Identities = 372/408 (91%), Positives = 380/408 (93%) Query: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTAWLQEVLDHV 60 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTA LQEVLDHV Sbjct: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHV 60 Query: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNTGSIESIVKDAVILTKNVNSL 120 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSN GSIESIVKDAVILTKNVNSL Sbjct: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120 Query: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA Sbjct: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180 Query: 181 SRGKVADSKVHPPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYSSILYWAVG 240 SRGKVADS+VH PKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHY SI YWA Sbjct: 181 SRGKVADSQVHRPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYKSIFYWAFE 240 Query: 241 TLTYSVDNKTTTREYYKDPYYATWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300 Y DN ++D Y TWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA Sbjct: 241 NFQYHQDNNMLIFYSHRDFYRITWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300 Query: 301 SQNKYMLMLAIGNQLSRSSVEKEKIEKVLQDCHYMHKRHRTGRDAITIFSVGFSPDQDTR 360 S +KYMLM AIGNQLSRSSV KE I+++LQDC+YMHK HRTGR AITIFSVGFSPDQDTR Sbjct: 301 SHSKYMLMFAIGNQLSRSSVGKETIDRILQDCYYMHKHHRTGRGAITIFSVGFSPDQDTR 360 Query: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS Sbjct: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408 >gi|315122409|ref|YP_004062898.1| hypothetical protein CKC_03305 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495811|gb|ADR52410.1| hypothetical protein CKC_03305 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 411 Score = 571 bits (1472), Expect = e-161, Method: Composition-based stats. Identities = 140/416 (33%), Positives = 221/416 (53%), Gaps = 21/416 (5%) Query: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTAWLQEVLDHV 60 MF +NFL RL CT G FL+++A+LLSSF+ I+D++ D +++ LQ +D+ Sbjct: 1 MFYYRNFLSVFSRLNHCTNGSFLIVSAVLLSSFLTIMDIMRDYTDMIRVRNMLQSSIDYA 60 Query: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNTGSIESIVKDAVILTKNVNSL 120 ++ +P L R+ I+ +I L++ L I+ IV + + + Sbjct: 61 LH-NNPNELSVGTIKQREMLIKKRIGYFLDSNYKGTLLTEEQIKLIVNQSTVSITERSFY 119 Query: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180 P QF ++I L +QL+ +L M K +IS+RK +YK+N+ LM++PF W G W+ Sbjct: 120 PQQFHINIELHKNIQLKSLILHMAMNPKKDFNISQRKSSLYKKNVALMVVPFTWTGEWIP 179 Query: 181 SR---GKVADSKVHPPKYLEYSHYYQ-QYLN-RNTLVKNFLSQIPYKNFCMAPYHYSSIL 235 + S+ P L+ H+ + +Y N RN K FLS+I N C+APYHYS+I+ Sbjct: 180 PSLFTTQFTVSQDLLPSDLKTEHFKKTEYFNKRNQFFKMFLSKIKENNLCIAPYHYSAIV 239 Query: 236 YWAVGTLTYSVDNKTT----TREYYKDPYYATWDHFPYSFIKNVF---DMTSNQFGDGQV 288 YW+ G +Y + TT R+ Y Y WD P ++I ++F ++ SN+ Sbjct: 240 YWSEGIFSYKLPFSTTFLYSFRDIYVKQYSTIWDMKPSNYILDLFAGAELHSNR------ 293 Query: 289 LTNTNHCFPHGASQNKYMLMLAIGNQLSRSSVEKEKIEKVLQDCHYMHKRH-RTGRDAIT 347 LT + CF G Q K+ML++A GNQ+S E K+ C M K + ++ IT Sbjct: 294 LTPADPCFRRGVIQKKFMLIIAAGNQISDRKNSAEYF-KMKHGCTLMGKNMGKNPQEEIT 352 Query: 348 IFSVGFSPDQDTRYTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTI 403 ++S+G SPD DT+ L QC P +YYEI S +++ P+ L RN+ + W F+I Sbjct: 353 VYSLGISPDPDTKRDLIQCTRHPDRYYEIQSYKDIAPVIDRLERNISSVWNDGFSI 408 >gi|315122199|ref|YP_004062688.1| hypothetical protein CKC_02245 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495601|gb|ADR52200.1| hypothetical protein CKC_02245 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 463 Score = 43.2 bits (100), Expect = 0.083, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 57/144 (39%), Gaps = 11/144 (7%) Query: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTAWLQEVLDHV 60 M NK+ RLKKC G F VI+A+LL ++ +++D V L + ++ Sbjct: 1 MVFNKSLFFNFKRLKKCYNGSFFVISALLLPVIFMVIGLLIDLVRWGYYHNSLVQAVNTA 60 Query: 61 IYRTSPKNLYDLREAGRDNFIRHQIE------KALNTYNSRDLSNTGSIESIVKDAVILT 114 S + L + + ++ + + LN +N G ++S +I Sbjct: 61 ALSASVQLLNSVEDKSKEKALSSVLGENNIKQYLLNNLKISLYNNFGEMDS---QRIIQH 117 Query: 115 KNVNSLPLQFT--VDIALSTTVQL 136 VN + T +++ + L Sbjct: 118 TKVNIYNRKGTHIINVYSHYNLPL 141 >gi|220906794|ref|YP_002482105.1| signal transduction histidine kinase [Cyanothece sp. PCC 7425] gi|219863405|gb|ACL43744.1| signal transduction histidine kinase [Cyanothece sp. PCC 7425] Length = 1560 Score = 40.1 bits (92), Expect = 0.70, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 56/174 (32%), Gaps = 30/174 (17%) Query: 103 IESIVKDAVILTKNVNSLPLQFTVDIALSTTVQLRGSLLQMFSQSKG----KVDISRRKK 158 ++ + I N ++ +L VQ R + LQM + + D+S + Sbjct: 975 LQQLANQVGIAIYQANLYQQVQQLNQSLEEQVQERTAQLQMALSATSMGTWEWDLSNNVE 1034 Query: 159 VMYKQNIGLMIMP-------FAWDGYWL--ASRGKVADSKVHPPKYLEYSHYYQQYLNRN 209 +Q+ GLM F DG + + S VH P LEY Q R Sbjct: 1035 RWSEQSYGLMGYQVDQQGNIFDLDGQAVNTPPSHNLFLSHVH-PDDLEYLERVQTQSLRE 1093 Query: 210 TLVKNFLSQIPYKNFCMAPYHYSSILYWAVGTLTYSVDNKTTTREYYKDPYYAT 263 AP+ Y W+ G++ + + + P A Sbjct: 1094 Q----------------APFEYEFRFVWSDGSIHWCYTRGAYIFDAHGQPLRAV 1131 >gi|316964581|gb|EFV49619.1| conserved hypothetical protein [Trichinella spiralis] Length = 271 Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 10/123 (8%) Query: 31 SSFVAIVDVVVDQVTVMQKTAWLQEVLDHVIYRTSPKNLYDLREAGRDNFIRHQIEKALN 90 S+F+AI + + ++ + L V + + YDL +R Q+EK + Sbjct: 48 SNFMAIFVITRQEGDKLEVLS-TSSSLKPVSFPNFYVDNYDLTT------LRSQLEKIIL 100 Query: 91 TYNSRDLSNTGSIESIVKDAVILTKNVNSLPLQFTVDIALSTTVQLRGSLLQMFSQSKGK 150 NS+ + I+ IVKDA+ + L FT D + + L ++Q+ QSK Sbjct: 101 HSNSQKSHSEEEIKKIVKDAM---HHSTLLKQGFTPDASNTDNSWLETVIVQISDQSKKH 157 Query: 151 VDI 153 V + Sbjct: 158 VGL 160 >gi|226499930|ref|NP_001141473.1| hypothetical protein LOC100273583 [Zea mays] gi|194704720|gb|ACF86444.1| unknown [Zea mays] Length = 504 Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 41/95 (43%), Gaps = 2/95 (2%) Query: 232 SSILYWAVGTLTYSVDNKTTTREYYKDPYYATWDHFPYSFIKNVFDMTSNQFGDGQVLTN 291 + + + + L + T E Y ++ +F + ++ F G + T Sbjct: 208 AQLAFVSDEVLPPKLSYNYTFIETTYTLYTNSFLNFGQNAAQDSFHEMLRSRGSSENATL 267 Query: 292 TNHCFPHGASQNKYMLMLAIGNQLSRSSVEKEKIE 326 + C P G S+N+ M++ G SRS++E + ++ Sbjct: 268 ADPCAPRGYSRNEEMMLRMSG--ASRSTLENQYVD 300 >gi|194701456|gb|ACF84812.1| unknown [Zea mays] Length = 374 Score = 38.1 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 41/95 (43%), Gaps = 2/95 (2%) Query: 232 SSILYWAVGTLTYSVDNKTTTREYYKDPYYATWDHFPYSFIKNVFDMTSNQFGDGQVLTN 291 + + + + L + T E Y ++ +F + ++ F G + T Sbjct: 78 AQLAFVSDEVLPPKLSYNYTFIETTYTLYTNSFLNFGQNAAQDSFHEMLRSRGSSENATL 137 Query: 292 TNHCFPHGASQNKYMLMLAIGNQLSRSSVEKEKIE 326 + C P G S+N+ M++ G SRS++E + ++ Sbjct: 138 ADPCAPRGYSRNEEMMLRMSG--ASRSTLENQYVD 170 >gi|326679371|ref|XP_690846.5| PREDICTED: interferon-induced very large GTPase 1 [Danio rerio] Length = 1700 Score = 37.0 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 69/169 (40%), Gaps = 23/169 (13%) Query: 46 VMQKTAWLQEVLDHVIYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDL--SNTGSI 103 +++ A Q+ +IY T+P+ + NFIR ++ + + +++ S Sbjct: 1403 ILKTLAEKQDFRAFIIYITNPREHF-------KNFIRDEVNQFVTKTFEKNVRPKMENST 1455 Query: 104 ESIVKDAVILTKNVNSLPLQFTVDIAL---STTVQLRGSLLQMFSQS------KGKVDIS 154 + + + + + + ++ L T QL G L+ FS+S +G ++S Sbjct: 1456 KVLEQQITNAARESSKYVKETDGNVGLWLRHFTQQLSGVLI--FSESDLIGVNQGDANVS 1513 Query: 155 RRKKVMYKQNIGLMIMPFAWDGYWLASRGKVADSKVHPPKYLEYSHYYQ 203 + V+ K+ L + F + + +V + H P + H+ Q Sbjct: 1514 FLEDVIKKE---LPSIKFDIFSKFRPEKFQVKLEQAHRPDEILIDHFCQ 1559 >gi|222149754|ref|YP_002550711.1| hypothetical protein Avi_3756 [Agrobacterium vitis S4] gi|221736736|gb|ACM37699.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 437 Score = 37.0 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 2/126 (1%) Query: 13 RLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTAWLQEVLDHVIYRTSPKNLYDL 72 RL + + G F ++TA+LL + + + +D ++Q + LQ +D + + Sbjct: 41 RLLRHSGGNFGMMTAVLLPVSIGVAGLAMDATEMVQSRSALQSSVDAAALAAASAMSNGM 100 Query: 73 REAGRDNFIRHQIEKALNTYNSRD--LSNTGSIESIVKDAVILTKNVNSLPLQFTVDIAL 130 EA + + L +RD S+ I D + T VNS + V++ Sbjct: 101 SEADAIALAKSFLSSQLANTMARDENTSSVDQITQAEPDISVKTTQVNSSSTSYDVELTG 160 Query: 131 STTVQL 136 S T+ + Sbjct: 161 SYTITM 166 >gi|150866507|ref|XP_001386136.2| putative transcription factor [Scheffersomyces stipitis CBS 6054] gi|149387763|gb|ABN68107.2| putative transcription factor [Scheffersomyces stipitis CBS 6054] Length = 649 Score = 37.0 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 52/293 (17%), Positives = 104/293 (35%), Gaps = 44/293 (15%) Query: 57 LDHVIYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNTGSIESIVKDAVILTKN 116 L+ + + + +E DN IR +I K +N ++ L N G + N Sbjct: 290 LEFINEFSHKTKMNISQEVNLDNLIRERIYKFININSNYWLINLG----------LSNNN 339 Query: 117 VNSLPLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDG 176 N + ++ + + + + S + S K+ + + K +N+ ++I Sbjct: 340 YNGFTQDYIINKSSNIDILNKTSEGDHYINSLLKISMIQSK---LNENMNILI------- 389 Query: 177 YWLASRGKVADSKVHPPKYLEYSHYYQQYLNRNTLVKNFLSQI---PYKNFCMAPYHYSS 233 G ++S P L S N ++ + L++I + + S Sbjct: 390 ------GNNSESVSLLPNQLNTSKLIN--FNMFEIIIDDLNKILVRDDNSLVLNNLIKIS 441 Query: 234 ILYWAVGTLTYSVDNKTTTREYYKDPYYATWDHFPYSFIKNVFDMTSNQFGDGQVLTNTN 293 I + + YS+ T YK H+ +K+ F + S+QF D + N Sbjct: 442 IEFSKLQLFVYSLSKSDITILEYK--------HYITKVLKSCFIIFSSQFQDNSLNFNQL 493 Query: 294 HCFPHGASQNKYMLML-----AIGNQLSRSSVEKEKIEKVLQDCHYMHKRHRT 341 + ++ML I N +S + KEK ++ + K + Sbjct: 494 PIHYKFPIELAMLIMLRVFKSPIMNSISDYKLVKEKFNQMYDNIIMGGKNNED 546 >gi|193700169|ref|XP_001949866.1| PREDICTED: protein singed-like [Acyrthosiphon pisum] Length = 520 Score = 36.6 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 1/73 (1%) Query: 295 CFPHGASQNKYMLM-LAIGNQLSRSSVEKEKIEKVLQDCHYMHKRHRTGRDAITIFSVGF 353 C A ++ L+ LA Q++ SV +++ + ++ +H T+F++ Sbjct: 142 CTAKAAGSSELWLVHLAARPQVNLRSVGRKRFAHLSENLDEIHVDANIPWGEDTLFTLEL 201 Query: 354 SPDQDTRYTLRQC 366 PD D +Y + C Sbjct: 202 RPDDDFKYAIHTC 214 >gi|329766483|ref|ZP_08258027.1| thiamine-monophosphate kinase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137082|gb|EGG41374.1| thiamine-monophosphate kinase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 317 Score = 36.2 bits (82), Expect = 8.5, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 20/161 (12%) Query: 62 YRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRD--LSNTGSIESIVKDAVILTKNVNS 119 Y S + + + F++ I+ +N D + N I S + + L+ +N Sbjct: 158 YTASGLKILLGKNKKSNQFVKKVIKSFVNPRPKLDFGVRNRRYISSSMDSSDGLSATLNE 217 Query: 120 LPLQ----FTVD-----------IALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQN 164 + Q F ++ + L+ + L + + + +S++ K + K+N Sbjct: 218 MANQSKCRFVINNIPTGKDMIEFVKLNK-MNLNELVFHGGEEYEFVFTVSKKHKAIIKKN 276 Query: 165 IGLMIMPFAWDGYWLASRGKV--ADSKVHPPKYLEYSHYYQ 203 + P GY RG D + P K L + H+ + Sbjct: 277 ALQLNTPIIEIGYVTKGRGVFLETDERDVPLKDLGWKHFKK 317 >gi|224058383|ref|XP_002195268.1| PREDICTED: Janus kinase 1 (a protein tyrosine kinase) [Taeniopygia guttata] Length = 1190 Score = 36.2 bits (82), Expect = 8.5, Method: Composition-based stats. Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 6/98 (6%) Query: 192 PPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNF---CMAPYHYSSILYWAVGTLTYSVDN 248 PK + Y HY + LNR +NFL++I N + ++ +I +V V Sbjct: 249 LPKDISYKHYIPETLNRTIRQRNFLTRIRINNVFKHFLKEFNNKTICNNSVSPRDLKVKY 308 Query: 249 KTTTREYYKDPYYATWDHFPYSFIKNVFDMTSNQFGDG 286 +T E Y A + F SF+ + N+F G Sbjct: 309 LSTM-EILTKYYGA--EIFETSFLLISAENEVNKFNCG 343 >gi|197105075|ref|YP_002130452.1| hypothetical protein PHZ_c1612 [Phenylobacterium zucineum HLK1] gi|196478495|gb|ACG78023.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 521 Score = 36.2 bits (82), Expect = 8.6, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 35/85 (41%) Query: 311 IGNQLSRSSVEKEKIEKVLQDCHYMHKRHRTGRDAITIFSVGFSPDQDTRYTLRQCASDP 370 G ++ SS ++E+ + + + I I+++ + L+ CAS Sbjct: 432 AGRPITESSSQRERTAALDDRLLKLCANMKAPAKDIEIYAIRVEVSSGSSSVLQTCASSA 491 Query: 371 SKYYEINSDENVMPIAKSLARNVIT 395 YY++ + ++ +S+A + Sbjct: 492 DHYYDVQNAADMTMAFQSIAGQIAA 516 >gi|15891094|ref|NP_356766.1| hypothetical protein Atu3868 [Agrobacterium tumefaciens str. C58] gi|15159433|gb|AAK89551.1| hypothetical protein Atu3868 [Agrobacterium tumefaciens str. C58] Length = 412 Score = 36.2 bits (82), Expect = 8.6, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 48/130 (36%), Gaps = 15/130 (11%) Query: 18 TRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTAWLQEV------LDHVIYRTSPKNLYD 71 T G F ++TAILL + + ++ VMQ A +Q R L D Sbjct: 17 TSGNFGMMTAILLPVLLGVAGAGMELANVMQVKADMQNTADSAALAAATEARLREGKLSD 76 Query: 72 LREAG-RDNFIRHQIEKALNTYNSRDLSNTGSIESIVKDAVILTKNVNSLPLQFTVDIAL 130 + NFI Q+EK +L+ IE +T N+ + V+ + Sbjct: 77 EQIKEIAKNFIAAQMEK--------NLTAEEKIELEKNSPTRVTTTENARGKTYAVETTI 128 Query: 131 STTVQLRGSL 140 +QL L Sbjct: 129 KHQIQLNPML 138 >gi|328713142|ref|XP_001951374.2| PREDICTED: nipped-B-like protein [Acyrthosiphon pisum] Length = 1920 Score = 36.2 bits (82), Expect = 9.8, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 11/191 (5%) Query: 213 KNFLSQIPYKNFCMAPYHYSSILYWAVGTLTYSVDNKTTTREYYKDPYYATWDHFPYSFI 272 + FLSQ+ + H +++ + L V+N T + +D + Y ++ Sbjct: 1247 EIFLSQLEEDAVKLIMKHDQTVILSCISCLGSVVNNVTRNFKLIRDCFGIY-----YKYL 1301 Query: 273 KNVFDMTSNQFGDGQVLTNTNHCFPHGASQNKYMLMLAIGNQLSRSSVEKEKIEKVLQDC 332 N + ++ + Q L F ML + V + + ++D Sbjct: 1302 SNFQKLHQDRQTNPQGLIPLRPIFRRSIYIIGLMLRFF---DFTDKDVYGDAYPENIRDL 1358 Query: 333 HY--MHKRHRTGRDAITIFSV-GFSPDQDTRYTLRQCASDPSKYYEINSDENVMPIAKSL 389 Y M T D +F++ Y C + Y +I S+ +V I KS Sbjct: 1359 VYDIMSYFMHTNEDDTKLFALKAIGSICIRHYDFMLCQDLMNTYLDILSNNSVPNIMKSQ 1418 Query: 390 ARNVITNWFSQ 400 N I + + Sbjct: 1419 ILNNIEIYLEE 1429 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.313 0.132 0.371 Lambda K H 0.267 0.0403 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,033,728,837 Number of Sequences: 14124377 Number of extensions: 266192572 Number of successful extensions: 768563 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 28 Number of HSP's that attempted gapping in prelim test: 768533 Number of HSP's gapped (non-prelim): 47 length of query: 411 length of database: 4,842,793,630 effective HSP length: 141 effective length of query: 270 effective length of database: 2,851,256,473 effective search space: 769839247710 effective search space used: 769839247710 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 82 (36.2 bits)