HHsearch alignment for GI: 254781009 and conserved domain: pfam06748
>pfam06748 DUF1217 Protein of unknown function (DUF1217). This family represents a conserved region that is found within bacterial proteins, most of which are hypothetical. Some members contain multiple copies.
Probab=100.00 E-value=0 Score=360.12 Aligned_cols=150 Identities=33% Similarity=0.566 Sum_probs=145.4
Q ss_pred HCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 54888544128999999622788855777521647899999761877657655677432245667999999999877888
Q gi|254781009|r 533 SKGIDSQKVREDFLCEIFKSDLKDPKSFANTYKDNRYKEIISSFNFDIHGELSHKKIGKVQDNFHIDDTCDLYKHQMIEK 612 (750)
Q Consensus 533 AfGL~~~~~~~~~i~kvL~sd~~d~~slaN~l~D~ry~~la~aF~F~~~G~~~~~~~~~~q~~~~~~~i~d~Y~~qs~E~ 612 (750)
T Consensus 1 AfGLed~~~~ka~ikkvL~sd~~d~~S~aN~L~D~Ry~~lA~AF~F~~~g~~------~~q~~~~~~~iv~~Y~~~~~E~ 74 (150)
T pfam06748 1 AFGLEDMIYAKAFIKKVLESDLSDPDSFANKLSDKRYREFAAAFNFGADGTL------ATQTAAQTQATVDKYLRQSLEE 74 (150)
T ss_pred CCCCHHHHCCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCC------CCCCHHHHHHHHHHHHHHHHHH
T ss_conf 9994010220899999981599972789987088999999998489988875------4367889999999999999999
Q ss_pred HHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCHHHCCCHHHHH
Q ss_conf 7300385469999998632550029987277899999999704867663199999999999621978649989999
Q gi|254781009|r 613 KEEEKDPNIALALYFKRTIPNIRNHYEILGDSKLFKVVSKKLKLSPYFAVLPERKKIRILKKHIKINDFKDSKKVE 688 (750)
Q Consensus 613 ~~Ge~n~gvRLALyF~R~a~~Its~y~ILgD~aL~~V~~TAlgLP~~~a~~DiDkQa~li~~k~Di~dl~DP~kv~ 688 (750)
T Consensus 75 ~~g~~n~~~rlALyf~r~~~~its~~~iL~d~~L~~v~~talgLp~~~~~~did~Q~~~i~~~ld~sdl~DP~~v~ 150 (150)
T pfam06748 75 AAGEQNEGVRLALYFRRKAGTITSAYDILADPALREVALTALGLPSSVSALDIDKQAELIKKKLDLSDLSDPKSVV 150 (150)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHCCHHHCCCCCCCC
T ss_conf 9735577799999999971778569999878889999999929997762489999999999852787548930129