HHsearch results for GI: 254781009 and protein with PDBid: 2o8s_A
>2o8s_A AGR_C_984P; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Agrobacterium tumefaciens str} SCOP: a.295.1.1
Probab=100.00 E-value=0 Score=529.70 Aligned_cols=283 Identities=22% Similarity=0.355 Sum_probs=253.7
Q ss_pred CCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 88701354201431578888744877678566510111133445568899987776411222235642111024566788
Q gi|254781009|r 420 PSDPDSYANKSKDDRLIKLNHAFNFNADGSIGPIPMMQSRLTIRDNVKHYANRKRSIHDAENKSFNSMEQISTQKRINLE 499 (750)
Q Consensus 420 ~~Dp~S~aN~L~D~Ry~~lA~AFnF~~dG~~~~~~~~q~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (750)
|.-|.||+|-.. ++|++|||+++|.....-..|.++.+..+...|+.-.+ ++..+....+.++.
T Consensus 17 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~sty~~y~~l~r-----------~~~~~l~~~a~~p~ 80 (323)
T 2o8s_A 17 PPAPPSPQPVSH-----KQAATLCRQGRTCALKSGSNESGGSVTSTYTSYRLISQ-----------DIGKSLERVSKQPD 80 (323)
T ss_dssp ---CCCCCCCCC-----C------------------------CCHHHHHHHHHHH-----------THHHHHHHHTTSHH
T ss_pred CCCCCCCCCCCH-----HHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHHHHHH-----------HHHHHHHHHHCCHH
T ss_conf 999899665208-----99998811554201003432147841103688999985-----------18999999863737
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHCCCC
Q ss_conf 89899999974156678999941489999998754888544128999999622788855777521647899999761877
Q gi|254781009|r 500 INSEVDYYTLNINTIHSFEELLANKRILNFLLESKGIDSQKVREDFLCEIFKSDLKDPKSFANTYKDNRYKEIISSFNFD 579 (750)
Q Consensus 500 ~~~e~~yf~~~i~~i~s~~dll~D~rl~~~aL~AfGL~~~~~~~~~i~kvL~sd~~d~~slaN~l~D~ry~~la~aF~F~ 579 (750)
+++|++||+++|++|+|+||||+|+||++|+|+||||++++++++||||||+||++||+||+|+|+|+||++|+.+|||+
T Consensus 81 v~Re~~Yf~e~Ig~VtSvddLl~D~RL~~~aL~AfGLed~~~~kafikKVLesd~~D~~S~ANrL~D~Ry~~~A~AFnF~ 160 (323)
T 2o8s_A 81 VARETEYYREKIGSVKSIDDFMADTRLYNYALKAHGLEDMAYAKAFIRKVLTEGASDKNAFANKLSDNRYAELAKSLDFA 160 (323)
T ss_dssp HHHHHHHHHHHGGGCCSHHHHHTCHHHHHHHHHHTTGGGSTTCHHHHHHHHHHCSSSTTCGGGGSSSTHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHCCC
T ss_conf 77899999987378788999834689999999976998442519999999706998705688862668899999970999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCHH
Q ss_conf 65765567743224566799999999987788873003854699999986325500299872778999999997048676
Q gi|254781009|r 580 IHGELSHKKIGKVQDNFHIDDTCDLYKHQMIEKKEEEKDPNIALALYFKRTIPNIRNHYEILGDSKLFKVVSKKLKLSPY 659 (750)
Q Consensus 580 ~~G~~~~~~~~~~q~~~~~~~i~d~Y~~qs~E~~~Ge~n~gvRLALyF~R~a~~Its~y~ILgD~aL~~V~~TAlgLP~~ 659 (750)
+.|... .|..++..+|+++|++|+||.++|++|+||||||||+|++|+|++||+||||++|++||+||||||++
T Consensus 161 ~~G~~~------tq~~~~~~~ivd~Y~~q~fE~~~Ge~n~~vRlALyF~R~~~~Its~ydIL~D~~L~~vv~TAlGLP~~ 234 (323)
T 2o8s_A 161 GLGAAA------TATEAAKSGVIGNYARQTLEQEAGDDNNGVRLALYFERKAPTIKSGLDFLADDALAQVFRTTFNLPDA 234 (323)
T ss_dssp HHGGGT------TSSTTTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSTTCCSHHHHHTSHHHHHHHHTTTTC---
T ss_pred CCCCCC------CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHCCHHHHHCCHHHHHHHHHHCCCCHH
T ss_conf 888754------46568999999999999999985467888999999997440023499996788999999998199866
Q ss_pred HHCCCHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEC
Q ss_conf 63199999999999621978649989999999998753110111112456786666415888416764420000
Q gi|254781009|r 660 FAVLPERKKIRILKKHIKINDFKDSKKVEDFLYAAKAMDHQSIDYKKALFSSPNQNKDPWNNSFDDPQNNVSLQ 733 (750)
Q Consensus 660 ~a~~DiDkQa~li~~k~Di~dl~DP~kv~kli~RF~Am~~~~yD~~n~~~~s~~~~~sp~~~lf~~~~~~~~~~ 733 (750)
|+++|||||+++|++|+||+||+||++|+|||+||++| ||++|++.+ ++|+..+...++.+|+..
T Consensus 235 ~a~lDiDkQa~~i~~k~disdf~DP~~v~kli~RFla~----~d~~n~~~~-----ss~~~ll~~~~~~~is~~ 299 (323)
T 2o8s_A 235 FAAADVDKQAALIEKSINIKDLQDPEKVGKLLERFTIM----WEMQNPSTT-----YDPLAVFGSSSGYGISPD 299 (323)
T ss_dssp --CCCCTTHHHHHHHSSCTTTTTCTTHHHHHHHHHHHH----HHHHCC--------------------------
T ss_pred HCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH----HHHHCCCCC-----CCHHHHHHCCCCCCCCHH
T ss_conf 51288899999999751498548979999999999999----998666778-----878999706874455889