HHsearch results for GI: 254781009 and protein with PDBid: 2o8s_A
>2o8s_A AGR_C_984P; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Agrobacterium tumefaciens str} SCOP: a.295.1.1
Probab=100.00 E-value=0 Score=402.70 Aligned_cols=215 Identities=29% Similarity=0.445 Sum_probs=199.8
Q ss_pred CCCCCCCC-CCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 97520210-01254147999887608656889999998507758898996668999999997597244105999999982
Q gi|254781009|r 1 MIPSHVAP-FPSKDIQSKLFSTVSKDPIVSCEERYYRERIKHISTIDEFIKDKRLFSYALKAFGLSDMSHAEKFIKKILE 79 (750)
Q Consensus 1 ~~~~~~~~-~~~rd~~~~~~~~~a~~p~V~r~~~yy~~~I~~v~svDdll~D~rl~~yamkA~GLedm~~aka~~kKVLe 79 (750)
|+++|++| +..|||...+ ++++++|+|+||++||++|||+|+||||||+|+|||+|+|+|||||||+++|+|||||||
T Consensus 54 ~~sty~~y~~l~r~~~~~l-~~~a~~p~v~Re~~Yf~e~Ig~VtSvddLl~D~RL~~~aL~AfGLed~~~~kafikKVLe 132 (323)
T 2o8s_A 54 VTSTYTSYRLISQDIGKSL-ERVSKQPDVARETEYYREKIGSVKSIDDFMADTRLYNYALKAHGLEDMAYAKAFIRKVLT 132 (323)
T ss_dssp CCHHHHHHHHHHHTHHHHH-HHHTTSHHHHHHHHHHHHHGGGCCSHHHHHTCHHHHHHHHHHTTGGGSTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHH
T ss_conf 1103688999985189999-998637377789999998737878899983468999999997699844251999999970
Q ss_pred CCCCCCCHHHHHCCCHHHHHHHHHCCCCCC-CCCCCCHHHHHHHHHHH-HHHHHHHHCCCCHHHH---HHHHHCCCCCCH
Q ss_conf 689983301332066899999998187877-76442036788998877-8767753012210458---898511345899
Q gi|254781009|r 80 SDLSDPKSLVNQLNSLKYQYFARSYDFSPP-PKVIQSDIQHKTIIQDY-KQSHQHKEEVALEESK---YFRKNIHKINSV 154 (750)
Q Consensus 80 sd~~D~~s~aNkL~D~Ry~~fA~af~F~~~-~~~~~~~~~~~~~i~~y-~~~~~~~~~~~~~~~~---Yf~~~~~~Itsv 154 (750)
||++|++||||||+|+||++||++|||++. +..+|+..+.++++++| .++++...++++++++ ||+|++++|++|
T Consensus 133 sd~~D~~S~ANrL~D~Ry~~~A~AFnF~~~G~~~tq~~~~~~~ivd~Y~~q~fE~~~Ge~n~~vRlALyF~R~~~~Its~ 212 (323)
T 2o8s_A 133 EGASDKNAFANKLSDNRYAELAKSLDFAGLGAAATATEAAKSGVIGNYARQTLEQEAGDDNNGVRLALYFERKAPTIKSG 212 (323)
T ss_dssp HCSSSTTCGGGGSSSTHHHHHHHHTCHHHHGGGTTSSTTTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSTTCCSH
T ss_pred CCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHCCH
T ss_conf 69987056888626688999999709998887544656899999999999999998546788899999999744002349
Q ss_pred HHHHCCHHHHHHHHHHCCCCHHHCCHHHHHH-------HHCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCC
Q ss_conf 9972438999999997398721203899988-------741887770023310350569999985378888
Q gi|254781009|r 155 DQLFKDRRLLDYVLQSFSITPKYISLPFLKD-------VLTLGLANPKKYFIESRDNRFRAMAENFRFQPD 218 (750)
Q Consensus 155 ddLL~D~~L~~vv~tAfGL~~~~~s~~~lk~-------vLtsD~sDp~S~~n~~~~~~y~~lAaaF~F~~D 218 (750)
|+||+|++|++||+|+||||+++...+..|| +..+|+.||..+..- -.||..+....|..+-
T Consensus 213 ydIL~D~~L~~vv~TAlGLP~~~a~lDiDkQa~~i~~k~disdf~DP~~v~kl--i~RFla~~d~~n~~~~ 281 (323)
T 2o8s_A 213 LDFLADDALAQVFRTTFNLPDAFAAADVDKQAALIEKSINIKDLQDPEKVGKL--LERFTIMWEMQNPSTT 281 (323)
T ss_dssp HHHHTSHHHHHHHHTTTTC-----CCCCTTHHHHHHHSSCTTTTTCTTHHHHH--HHHHHHHHHHHCC---
T ss_pred HHHHCCHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH--HHHHHHHHHHHCCCCC
T ss_conf 99967889999999981998665128889999999975149854897999999--9999999998666778