HHSEARCH alignment of GI: 254781009 and SCOP domain: d2o8sa1

Alignment
>d2o8sa1 a.295.1.1 (A:54-278) Uncharacterized protein AGR_C_984p {Agrobacterium tumefaciens [TaxId: 358]}
Probab=100.00  E-value=0  Score=473.06  Aligned_cols=208  Identities=25%  Similarity=0.468  Sum_probs=198.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHH
Q ss_conf             10245667888989999997415667899994148999999875488854412899999962278885577752164789
Q gi|254781009|r  490 ISTQKRINLEINSEVDYYTLNINTIHSFEELLANKRILNFLLESKGIDSQKVREDFLCEIFKSDLKDPKSFANTYKDNRY  569 (750)
Q Consensus       490 ~~~~~~~~~~~~~e~~yf~~~i~~i~s~~dll~D~rl~~~aL~AfGL~~~~~~~~~i~kvL~sd~~d~~slaN~l~D~ry  569 (750)
                      .....+.++.+++|++||+++|++|+|++|||+|+||++|+|+||||+++++++++|||||+||++||+||||+|+|+||
T Consensus        18 ~~~~~a~~~~v~re~~Yf~e~I~~v~svddll~D~rL~~~al~AfGL~~~~~~~~~lkkvL~sd~~d~~S~aN~l~D~Ry   97 (225)
T d2o8sa1          18 SLERVSKQPDVARETEYYREKIGSVKSIDDFMADTRLYNYALKAHGLEDMAYAKAFIRKVLTEGASDKNAFANKLSDNRY   97 (225)
T ss_dssp             HHHHHTTSHHHHHHHHHHHHHGGGCCSHHHHHTCHHHHHHHHHHTTGGGSTTCHHHHHHHHHHCSSSTTCGGGGSSSTHH
T ss_pred             HHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCHHH
T ss_conf             99998627788889999999836788899995488999999997699965363999999982699875889887378889


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHH
Q ss_conf             99997618776576556774322456679999999998778887300385469999998632550029987277899999
Q gi|254781009|r  570 KEIISSFNFDIHGELSHKKIGKVQDNFHIDDTCDLYKHQMIEKKEEEKDPNIALALYFKRTIPNIRNHYEILGDSKLFKV  649 (750)
Q Consensus       570 ~~la~aF~F~~~G~~~~~~~~~~q~~~~~~~i~d~Y~~qs~E~~~Ge~n~gvRLALyF~R~a~~Its~y~ILgD~aL~~V  649 (750)
                      ++|++||||+++|+..+      |..++..+|+++|++|+||.++|++|+||||||||+|++|+|+|||+||||++|++|
T Consensus        98 ~~~a~AFnF~~~g~~~~------~~~~~~~~i~~~Y~~~~~E~~~g~~d~~~rlALyf~r~~~~its~~~iL~d~~L~~v  171 (225)
T d2o8sa1          98 AELAKSLDFAGLGAAAT------ATEAAKSGVIGNYARQTLEQEAGDDNNGVRLALYFERKAPTIKSGLDFLADDALAQV  171 (225)
T ss_dssp             HHHHHHTCHHHHGGGTT------SSTTTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSTTCCSHHHHHTSHHHHHH
T ss_pred             HHHHHHHCCCCCCCCCC------CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHCCHHHHHCCHHHHHH
T ss_conf             99999829999987554------546889999999999998998457788899999999846012469999788899999


Q ss_pred             HHHHHCCCHHHHCCCHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             9997048676631999999999996219786499899999999987531101111124
Q gi|254781009|r  650 VSKKLKLSPYFAVLPERKKIRILKKHIKINDFKDSKKVEDFLYAAKAMDHQSIDYKKA  707 (750)
Q Consensus       650 ~~TAlgLP~~~a~~DiDkQa~li~~k~Di~dl~DP~kv~kli~RF~Am~~~~yD~~n~  707 (750)
                      |+||||||++|+++|||+|+++|++|+|+++|+||++|++||+||++|    ||++|.
T Consensus       172 ~~talgLp~~~a~~did~Q~~~i~~k~d~sd~~DP~~v~~~i~rf~~~----~d~~Np  225 (225)
T d2o8sa1         172 FRTTFNLPDAFAAADVDKQAALIEKSINIKDLQDPEKVGKLLERFTIM----WEMQNP  225 (225)
T ss_dssp             HHTTTTC-----CCCCTTHHHHHHHSSCTTTTTCTTHHHHHHHHHHHH----HHHHCC
T ss_pred             HHHHCCCCHHHCCCCHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHH----HHCCCC
T ss_conf             999909985543389899999999652297559989999999999999----870196


SCOP domain information

class: All alpha proteins
fold: AGR C 984p-like
superfamily: AGR C 984p-like
family: AGR C 984p-like
domain: Uncharacterized protein AGR C 984p
species: Agrobacterium tumefaciens [TaxId: 358]