HHsearch alignment for GI: 254781011 and conserved domain: PRK00553

Probab=99.24  E-value=9.5e-10  Score=84.44  Aligned_cols=151  Identities=20%  Similarity=0.321  Sum_probs=100.6

Q ss_pred             HHHHHHHHHHHCCCEEEECCCCEEEECCCCCCEEEECCC--CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHH
Q ss_conf             999999999865976820789867311872640142621--357989999999999998664217566678998223125
Q gi|254781011|r   12 IAELVAKMLFEIKAVNFSPENPYHLTSGIVSPLYIDCRK--LISFVRARSMIMDLTAKTVLRNIGFESIDIIAGGETAGI   89 (228)
Q Consensus        12 ~~~~~a~~L~~~~ai~~~~~g~F~L~SG~~Sp~Y~d~r~--~~s~P~~~~~i~~~~~~~i~~~~~~~~~d~I~G~a~~Gi   89 (228)
T Consensus       122 sak~vA~lL~~~G~drv---itvDlH~~qiq-gfF~iPvd~l~a~~~--------~~~~~~~~~~~~~-~vVVsPD~G~~  188 (340)
T PRK00553        122 TSKLVADLLTKAGVTRV---TLTDIHSDQTQ-GFFDIPVDILRTYHV--------FLSRVLELLGKKD-LVVVSPDYGGV  188 (340)
T ss_pred             CHHHHHHHHHHCCCCEE---EEECCCHHHHH-HCCCCCCCCCCCCHH--------HHHHHHHHCCCCC-CEEECCCCCHH
T ss_conf             39999856763588569---98435658885-216998652106288--------9999998649766-48988996389


Q ss_pred             HHHHHHHHHCCCCEEEEECCCCCCHHHH--HHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCC
Q ss_conf             7889998515871787631564201100--13310373341440878873223699999999865987856888874176
Q gi|254781011|r   90 PFATLLAERLNLPMIYVRKKSKKHGQKS--QIEGHLFKGARVLVIEDLVTLGNSMFEFVKVIRDSGGIIQDGIGLFFYDI  167 (228)
Q Consensus        90 p~a~~iA~~l~~p~~~vRK~~K~hG~~~--~iEG~~~~g~~vliVDDviTtG~S~~~~i~~l~~~g~~V~~~~vii~~~~  167 (228)
T Consensus       189 krA~~~A~~L~~~~a~~~K~R~~~~~~e~~~~iGdV-~Gk~vIIVDDiIdTGgTl~~aa~~Lk~~GA~~V--~a~aTHgv  265 (340)
T PRK00553        189 KRARLIAESLELPLAIIDKRRPKHNVAESINVLGEV-KNKNCLIVDDMIDTGGTVIAAAKLLKKQKAKKV--CVMATHGL  265 (340)
T ss_pred             HHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCC-CCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEE--EEEEECCC
T ss_conf             999999998299679985345789864113445554-685489525244312569999999998799879--99997951


Q ss_pred             CH-HHHHHHHHC
Q ss_conf             32-489999977
Q gi|254781011|r  168 FP-EVPARFREN  178 (228)
Q Consensus       168 ~~-~~~~~l~~~  178 (228)
T Consensus       266 fsg~A~eri~~~  277 (340)
T PRK00553        266 FNKNAIQLFDEA  277 (340)
T ss_pred             CCHHHHHHHHHC
T ss_conf             485799999852