HHsearch alignment for GI: 254781011 and conserved domain: PRK05259

Probab=99.08  E-value=1.8e-09  Score=82.70  Aligned_cols=115  Identities=18%  Similarity=0.356  Sum_probs=87.7

Q ss_pred             HHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHH--HHHHCCCCCCCEEEHHHHHHHHHHHH
Q ss_conf             9986642175666789982231257889998515871787631564201100--13310373341440878873223699
Q gi|254781011|r   66 AKTVLRNIGFESIDIIAGGETAGIPFATLLAERLNLPMIYVRKKSKKHGQKS--QIEGHLFKGARVLVIEDLVTLGNSMF  143 (228)
Q Consensus        66 ~~~i~~~~~~~~~d~I~G~a~~Gip~a~~iA~~l~~p~~~vRK~~K~hG~~~--~iEG~~~~g~~vliVDDviTtG~S~~  143 (228)
T Consensus       149 ~~~i~~~~~~~~-~vvVsPD~G~~~ra~~~a~~l~~~~~~~~K~R~~~~~~~~~~~~gdV-~Gk~~IIvDDiIdTGgTl~  226 (310)
T PRK05259        149 ARDIKARYDLGN-VMVVSPDVGGVVRARALAKRLDAPLAIVDKRRERPGESEVMNVIGDV-SGRDCILIDDIVDSGGTLC  226 (310)
T ss_pred             HHHHHHHCCCCC-EEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCC-CCCEEEEECCHHHCHHHHH
T ss_conf             678986389766-39991492699999999998199678999860689954334545662-3124895173441688999


Q ss_pred             HHHHHHHHCCCEEEEEEEEEECCCCHH-HHHHHHHCCCEEEE
Q ss_conf             999999865987856888874176324-89999977980999
Q gi|254781011|r  144 EFVKVIRDSGGIIQDGIGLFFYDIFPE-VPARFRENNIKLHY  184 (228)
Q Consensus       144 ~~i~~l~~~g~~V~~~~vii~~~~~~~-~~~~l~~~gi~~~s  184 (228)
T Consensus       227 ~aa~~Lk~~GA~~V~--~~~THgvfs~~A~~ri~~s~i~~vv  266 (310)
T PRK05259        227 NAAEALLANGANSVT--AYITHGVLSGGAVARIASSKLKELV  266 (310)
T ss_pred             HHHHHHHHCCCCEEE--EEEECCCCCCHHHHHHHCCCCCEEE
T ss_conf             999999877998699--9997853685699998628997899