HHsearch alignment for GI: 254781011 and conserved domain: PRK06827

Probab=99.11  E-value=1.8e-09  Score=82.70  Aligned_cols=154  Identities=14%  Similarity=0.217  Sum_probs=103.2

Q ss_pred             HHHHHHHHHHCCCEEEECCCCEEEECCCCCCEEEECC---CCCCCHHHHHHHHHHHHHHHHH-HCCCCCCCEEEEECCCH
Q ss_conf             9999999986597682078986731187264014262---1357989999999999998664-21756667899822312
Q gi|254781011|r   13 AELVAKMLFEIKAVNFSPENPYHLTSGIVSPLYIDCR---KLISFVRARSMIMDLTAKTVLR-NIGFESIDIIAGGETAG   88 (228)
Q Consensus        13 ~~~~a~~L~~~~ai~~~~~g~F~L~SG~~Sp~Y~d~r---~~~s~P~~~~~i~~~~~~~i~~-~~~~~~~d~I~G~a~~G   88 (228)
T Consensus       149 AkLvA~lL~~aGvdrv---iT~DLHa~qIQgfF-~i~pvDnl~~~~~~----~~~l~~~~~~~~~~~-~~~vVVSPD~Gg  219 (381)
T PRK06827        149 CALALQELEELGVDHI---LTFDIHDPNIQNAI-PLMSFENLYPSYEI----VKSLLENEKLLELDK-ENLVVISPDTGA  219 (381)
T ss_pred             HHHHHHHHHHCCCCEE---EEEECCCCCCCCCC-CCCCCCCCCCCHHH----HHHHHHHCCCCCCCC-CCCEEEECCCCC
T ss_conf             9999999997199969---99757872247787-78875467753899----999998453123686-777799269973


Q ss_pred             HHHHHHHHHHCCCCEEEEECCCC----CCHHHHHH----HHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             57889998515871787631564----20110013----31037334144087887322369999999986598785688
Q gi|254781011|r   89 IPFATLLAERLNLPMIYVRKKSK----KHGQKSQI----EGHLFKGARVLVIEDLVTLGNSMFEFVKVIRDSGGIIQDGI  160 (228)
Q Consensus        89 ip~a~~iA~~l~~p~~~vRK~~K----~hG~~~~i----EG~~~~g~~vliVDDviTtG~S~~~~i~~l~~~g~~V~~~~  160 (228)
T Consensus       220 v~RA~~~A~~L~~~laii~KrR~~s~v~~~~n~i~~~~~lggdV~GK~~IIvDDmIdTggTl~~aA~~Lk~~GA~~--V~  297 (381)
T PRK06827        220 MDRAKYYSSVLKVPLGLFYKRRDYSTVVNGKNPIVVHELLGRDVEGKDVFIVDDMIASGGSVLDAAKELKSRGAKK--II  297 (381)
T ss_pred             HHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCE--EE
T ss_conf             8999999997198989999764676445667843675241355679889997243145268999999999879988--99


Q ss_pred             EEEECCCCHHHHHHHHH
Q ss_conf             88741763248999997
Q gi|254781011|r  161 GLFFYDIFPEVPARFRE  177 (228)
Q Consensus       161 vii~~~~~~~~~~~l~~  177 (228)
T Consensus       298 a~aTHgvfS~a~e~~~~  314 (381)
T PRK06827        298 CAVSFPFFTEGLEKFDK  314 (381)
T ss_pred             EEEECHHCCCHHHHHHH
T ss_conf             99973660476999976