HHsearch alignment for GI: 254781011 and conserved domain: PRK09213
>PRK09213 purine operon repressor; Provisional.
Probab=99.75 E-value=2.7e-17 Score=133.69 Aligned_cols=135 Identities=23% Similarity=0.333 Sum_probs=110.2
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCC-----------CHHH
Q ss_conf 62135798999999999999866421756667899822312578899985158717876315642-----------0110
Q gi|254781011|r 48 CRKLISFVRARSMIMDLTAKTVLRNIGFESIDIIAGGETAGIPFATLLAERLNLPMIYVRKKSKK-----------HGQK 116 (228)
Q Consensus 48 ~r~~~s~P~~~~~i~~~~~~~i~~~~~~~~~d~I~G~a~~Gip~a~~iA~~l~~p~~~vRK~~K~-----------hG~~ 116 (228)
T Consensus 105 msDil~~P~~~~~iG~~fA~~f~~----~~id~VmTveTkGIplA~~vA~~L~VP~Vi~Rk~~kvTeG~tvsinYvSgss 180 (274)
T PRK09213 105 LSDLLGNPSILRKIGRIIASAFAD----KKIDAVMTVATKGIPLAYAVANYLNVPFVIVRRDSKVTEGSTVSINYVSGSS 180 (274)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHH----CCCCEEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEECCC
T ss_conf 026226989999999999987515----5998899983358618999999809989999767887679708999996366
Q ss_pred HHHH------HCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHCCCEEEEECCHHH
Q ss_conf 0133------1037334144087887322369999999986598785688887417632489999977980999632999
Q gi|254781011|r 117 SQIE------GHLFKGARVLVIEDLVTLGNSMFEFVKVIRDSGGIIQDGIGLFFYDIFPEVPARFRENNIKLHYLATWND 190 (228)
Q Consensus 117 ~~iE------G~~~~g~~vliVDDviTtG~S~~~~i~~l~~~g~~V~~~~vii~~~~~~~~~~~l~~~gi~~~sl~t~~~ 190 (228)
T Consensus 181 ~ri~tM~Lskr~L~~gsrVLiIDDFmk~Ggt~~Gm~~L~~Ef~a~vvGigV~i--e~~-~~~~klV~---dY~SL~~l~~ 254 (274)
T PRK09213 181 KRIETMSLSKRSLKEGSNVLIVDDFMKAGGTINGMISLLKEFDAEVVGIGVLV--ENK-EPEERLVD---DYVSLLKLSE 254 (274)
T ss_pred CEEEEEEEEHHHCCCCCEEEEECHHHHCCCHHHHHHHHHHHCCCEEEEEEEEE--ECC-CCHHHHHH---HEEEEEEEEE
T ss_conf 51899998763369998399983454476088999999997198797899999--548-80330022---1014689740
Q ss_pred HH
Q ss_conf 99
Q gi|254781011|r 191 IL 192 (228)
Q Consensus 191 il 192 (228)
T Consensus 255 vd 256 (274)
T PRK09213 255 VD 256 (274)
T ss_pred CC
T ss_conf 15