HHsearch alignment for GI: 254781011 and conserved domain: TIGR01134

>TIGR01134 purF amidophosphoribosyltransferase; InterPro: IPR005854 Purine nucleotides are synthesised both via the de novo pathway and via the salvage pathway and are vital for cell functions and cell proliferation through DNA and RNA syntheses and ATP energy supply. Amidophosphoribosyltransferase (2.4.2.14 from EC) is the rate-limiting enzyme in the de novo pathway of purine ribonucleotide synthesis and is regulated by feedback inhibition by AMP and GMP . 5-phospho-beta-D-ribosylamine + diphosphate + L-glutamate = L-glutamine + 5-phospho-alpha-D-ribose 1-diphosphate + H2O This family contains sequences which are members of the MEROPS peptidase family C44 (glutamine phosphoribosylpyrophosphate amidotransferase precursor, clan PB(C)) and sequences which are classed as non-peptidase homologs. These are sequences either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004044 amidophosphoribosyltransferase activity, 0009113 purine base biosynthetic process.
Probab=97.76  E-value=8.3e-05  Score=52.24  Aligned_cols=138  Identities=16%  Similarity=0.206  Sum_probs=87.3

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHH--HHHHCCCCE--EE--EEC-----C-CCCC----H---H
Q ss_conf             8999999999999866421756667899822312578899--985158717--87--631-----5-6420----1---1
Q gi|254781011|r   55 VRARSMIMDLTAKTVLRNIGFESIDIIAGGETAGIPFATL--LAERLNLPM--IY--VRK-----K-SKKH----G---Q  115 (228)
Q Consensus        55 P~~~~~i~~~~~~~i~~~~~~~~~d~I~G~a~~Gip~a~~--iA~~l~~p~--~~--vRK-----~-~K~h----G---~  115 (228)
T Consensus       274 y~aR~~mG~~La~~~~~p---veaDvVvPVPDSG~~aA~G~Afa~~sG~PY~EGl~kNRYVGRTF~~P~Q~~R~~~Vr~k  350 (467)
T TIGR01134       274 YYARVRMGEELAEESREP---VEADVVVPVPDSGRPAALGLAFAQESGIPYREGLVKNRYVGRTFMMPTQELRELSVRLK  350 (467)
T ss_pred             HHHHHHHHHHHHHHHCCC---CCCCEECCCCCCCHHHHHHHHHHHHHCCCCHHCCEECCCCCCCCCCCCHHHHHHHHHHH
T ss_conf             778999999999971378---88763328888860589999999870887025556624301013488878987321121


Q ss_pred             HHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEE-E-E-E----ECC-CCHHHHHHHH----------H
Q ss_conf             001331037334144087887322369999999986598785688-8-8-7----417-6324899999----------7
Q gi|254781011|r  116 KSQIEGHLFKGARVLVIEDLVTLGNSMFEFVKVIRDSGGIIQDGI-G-L-F----FYD-IFPEVPARFR----------E  177 (228)
Q Consensus       116 ~~~iEG~~~~g~~vliVDDviTtG~S~~~~i~~l~~~g~~V~~~~-v-i-i----~~~-~~~~~~~~l~----------~  177 (228)
T Consensus       351 LnP~r~-~~~GkrVvlVDDSiVRGTTSr~vV~mlR~AGA~EVH~riasPP~~~PC~YGiDmpt~~EL~A~~~~~~e~~~~  429 (467)
T TIGR01134       351 LNPVRS-VVEGKRVVLVDDSIVRGTTSRQVVEMLRDAGAREVHVRIASPPVRYPCYYGIDMPTREELAAARHTVEEIRRE  429 (467)
T ss_pred             CCCCHH-HHCCCEEEEEECCEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHH
T ss_conf             044303-3369758999424120713789999998729838987625888886583335375389873187768988766


Q ss_pred             CCCEEEEECCHHHHHHHHH
Q ss_conf             7980999632999999999
Q gi|254781011|r  178 NNIKLHYLATWNDILTIAE  196 (228)
Q Consensus       178 ~gi~~~sl~t~~~il~~l~  196 (228)
T Consensus       430 ~GADsL~YLSlegL~~a~~  448 (467)
T TIGR01134       430 IGADSLAYLSLEGLVAAVG  448 (467)
T ss_pred             CCCCEEEECCHHHHHHHHH
T ss_conf             0775135358899999853