HHsearch alignment for GI: 254781011 and conserved domain: TIGR01134
>TIGR01134 purF amidophosphoribosyltransferase; InterPro: IPR005854 Purine nucleotides are synthesised both via the de novo pathway and via the salvage pathway and are vital for cell functions and cell proliferation through DNA and RNA syntheses and ATP energy supply. Amidophosphoribosyltransferase (2.4.2.14 from EC) is the rate-limiting enzyme in the de novo pathway of purine ribonucleotide synthesis and is regulated by feedback inhibition by AMP and GMP . 5-phospho-beta-D-ribosylamine + diphosphate + L-glutamate = L-glutamine + 5-phospho-alpha-D-ribose 1-diphosphate + H2O This family contains sequences which are members of the MEROPS peptidase family C44 (glutamine phosphoribosylpyrophosphate amidotransferase precursor, clan PB(C)) and sequences which are classed as non-peptidase homologs. These are sequences either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004044 amidophosphoribosyltransferase activity, 0009113 purine base biosynthetic process.
Probab=97.76 E-value=8.3e-05 Score=52.24 Aligned_cols=138 Identities=16% Similarity=0.206 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHH--HHHHCCCCE--EE--EEC-----C-CCCC----H---H
Q ss_conf 8999999999999866421756667899822312578899--985158717--87--631-----5-6420----1---1
Q gi|254781011|r 55 VRARSMIMDLTAKTVLRNIGFESIDIIAGGETAGIPFATL--LAERLNLPM--IY--VRK-----K-SKKH----G---Q 115 (228)
Q Consensus 55 P~~~~~i~~~~~~~i~~~~~~~~~d~I~G~a~~Gip~a~~--iA~~l~~p~--~~--vRK-----~-~K~h----G---~ 115 (228)
T Consensus 274 y~aR~~mG~~La~~~~~p---veaDvVvPVPDSG~~aA~G~Afa~~sG~PY~EGl~kNRYVGRTF~~P~Q~~R~~~Vr~k 350 (467)
T TIGR01134 274 YYARVRMGEELAEESREP---VEADVVVPVPDSGRPAALGLAFAQESGIPYREGLVKNRYVGRTFMMPTQELRELSVRLK 350 (467)
T ss_pred HHHHHHHHHHHHHHHCCC---CCCCEECCCCCCCHHHHHHHHHHHHHCCCCHHCCEECCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 778999999999971378---88763328888860589999999870887025556624301013488878987321121
Q ss_pred HHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEE-E-E-E----ECC-CCHHHHHHHH----------H
Q ss_conf 001331037334144087887322369999999986598785688-8-8-7----417-6324899999----------7
Q gi|254781011|r 116 KSQIEGHLFKGARVLVIEDLVTLGNSMFEFVKVIRDSGGIIQDGI-G-L-F----FYD-IFPEVPARFR----------E 177 (228)
Q Consensus 116 ~~~iEG~~~~g~~vliVDDviTtG~S~~~~i~~l~~~g~~V~~~~-v-i-i----~~~-~~~~~~~~l~----------~ 177 (228)
T Consensus 351 LnP~r~-~~~GkrVvlVDDSiVRGTTSr~vV~mlR~AGA~EVH~riasPP~~~PC~YGiDmpt~~EL~A~~~~~~e~~~~ 429 (467)
T TIGR01134 351 LNPVRS-VVEGKRVVLVDDSIVRGTTSRQVVEMLRDAGAREVHVRIASPPVRYPCYYGIDMPTREELAAARHTVEEIRRE 429 (467)
T ss_pred CCCCHH-HHCCCEEEEEECCEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHH
T ss_conf 044303-3369758999424120713789999998729838987625888886583335375389873187768988766
Q ss_pred CCCEEEEECCHHHHHHHHH
Q ss_conf 7980999632999999999
Q gi|254781011|r 178 NNIKLHYLATWNDILTIAE 196 (228)
Q Consensus 178 ~gi~~~sl~t~~~il~~l~ 196 (228)
T Consensus 430 ~GADsL~YLSlegL~~a~~ 448 (467)
T TIGR01134 430 IGADSLAYLSLEGLVAAVG 448 (467)
T ss_pred CCCCEEEECCHHHHHHHHH
T ss_conf 0775135358899999853