HHsearch results for GI: 254781011 and protein with PDBid: 1dku_A
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=99.02 E-value=2.5e-09 Score=80.33 Aligned_cols=154 Identities=16% Similarity=0.225 Sum_probs=102.4
Q ss_pred HHHHHHHHHHCCCEEEECCCCEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHH
Q ss_conf 99999999865976820789867311872640142621357989999999999998664217566678998223125788
Q gi|254781011|r 13 AELVAKMLFEIKAVNFSPENPYHLTSGIVSPLYIDCRKLISFVRARSMIMDLTAKTVLRNIGFESIDIIAGGETAGIPFA 92 (228)
Q Consensus 13 ~~~~a~~L~~~~ai~~~~~g~F~L~SG~~Sp~Y~d~r~~~s~P~~~~~i~~~~~~~i~~~~~~~~~d~I~G~a~~Gip~a 92 (228)
++.+|++|-..|+=++- .|-+-|.... -||++-.....+. .. +++.+... . .+-.+|++|..|+...+
T Consensus 115 ak~va~lL~~~g~d~vi---t~DlH~~~~~-~~f~~~~~~~~~~--~~----~~~~~~~~-~-~~~~vvVaPD~Ga~~ra 182 (317)
T 1dku_A 115 AKLFANLLETAGATRVI---ALDLHAPQIQ-GFFDIPIDHLMGV--PI----LGEYFEGK-N-LEDIVIVSPDHGGVTRA 182 (317)
T ss_dssp HHHHHHHHHHHTCCEEE---EESCSSGGGG-GGCSSCEEEECSH--HH----HHHHHHTT-T-CCSEEEEESSGGGHHHH
T ss_pred HHHHHHHHHHCCCCEEE---EECCCCHHHH-CCCCCCCCCCCCC--HH----HHHHHHHC-C-CCCCEEECCCCCHHHHH
T ss_conf 99999887624997799---9636848775-0435774100021--46----77777640-7-55554778994379999
Q ss_pred HHHHHHCCCCEEEEECCCCCCHHHH--HHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCHH
Q ss_conf 9998515871787631564201100--13310373341440878873223699999999865987856888874176324
Q gi|254781011|r 93 TLLAERLNLPMIYVRKKSKKHGQKS--QIEGHLFKGARVLVIEDLVTLGNSMFEFVKVIRDSGGIIQDGIGLFFYDIFPE 170 (228)
Q Consensus 93 ~~iA~~l~~p~~~vRK~~K~hG~~~--~iEG~~~~g~~vliVDDviTtG~S~~~~i~~l~~~g~~V~~~~vii~~~~~~~ 170 (228)
..+|..++.|+.+..|+....+... .+.|.+ +|+.|+||||++.||||+.++++.|+++||.=+ .++..++.|.+
T Consensus 183 ~~~A~~l~~~~~~~~K~R~~~~~v~~~~~~gdV-~gk~vIIVDDii~TGgTl~~aa~~Lk~~GA~~V--~~~~THglfs~ 259 (317)
T 1dku_A 183 RKLADRLKAPIAIIDKRRPRPNVAEVMNIVGNI-EGKTAILIDDIIDTAGTITLAANALVENGAKEV--YACCTHPVLSG 259 (317)
T ss_dssp HHHHHHTTCCEEEEECC---------CEEESCC-TTCEEEEECSEESSCHHHHHHHHHHHHTTCSEE--EEECSEECCCT
T ss_pred HHHHHHCCCCEEEEEEEECCCCCEEEECCCCCC-CCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEE--EEEEECCCCCC
T ss_conf 999998299989999870799941340012354-797899867500146019999999997699778--99965343483
Q ss_pred -HHHHHHHCCCE
Q ss_conf -89999977980
Q gi|254781011|r 171 -VPARFRENNIK 181 (228)
Q Consensus 171 -~~~~l~~~gi~ 181 (228)
+.++|.+.++.
T Consensus 260 ~A~~~l~~s~i~ 271 (317)
T 1dku_A 260 PAVERINNSTIK 271 (317)
T ss_dssp THHHHHHTSSEE
T ss_pred HHHHHHHCCCCC
T ss_conf 799998607998