HHsearch results for GI: 254781011 and protein with PDBid: 1u9y_A

Probab=98.80  E-value=2.9e-08  Score=73.32  Aligned_cols=112  Identities=16%  Similarity=0.245  Sum_probs=86.1

Q ss_pred             HHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHH--HHHHCCCCCCCEEEHHHHHHHHHHH
Q ss_conf             99986642175666789982231257889998515871787631564201100--1331037334144087887322369
Q gi|254781011|r   65 TAKTVLRNIGFESIDIIAGGETAGIPFATLLAERLNLPMIYVRKKSKKHGQKS--QIEGHLFKGARVLVIEDLVTLGNSM  142 (228)
Q Consensus        65 ~~~~i~~~~~~~~~d~I~G~a~~Gip~a~~iA~~l~~p~~~vRK~~K~hG~~~--~iEG~~~~g~~vliVDDviTtG~S~  142 (228)
                      +++.+.++.   +-.+|++|..||.-.+..+|..++.|+.+..|..+..+...  .+.|. .+|+.|+||||++.||||+
T Consensus       146 l~~~~~~~~---~~~vvvsPD~g~~kra~~~a~~l~~~~~~~~k~r~~~~~~~~~~~~gd-v~g~~viIvDDii~tGgTl  221 (284)
T 1u9y_A          146 LAEYVKDKL---NDPIVLAPDKGALEFAKTASKILNAEYDYLEKTRLSPTEIQIAPKTLD-AKDRDVFIVDDIISTGGTM  221 (284)
T ss_dssp             HHHHHTTTC---SSCEEEESSGGGHHHHHHHHHHHTCCEEEBC----------CCBSSCC-CTTCCEEEEEEECSSSHHH
T ss_pred             HHHHHHHHC---CCCEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCC-CCCCEEEEECCHHHHHHHH
T ss_conf             999998653---686898479865789999998576632342023456640588313345-5665379974545426779


Q ss_pred             HHHHHHHHHCCCEEEEEEEEEECCCCH-HHHHHHHHCCCEE
Q ss_conf             999999986598785688887417632-4899999779809
Q gi|254781011|r  143 FEFVKVIRDSGGIIQDGIGLFFYDIFP-EVPARFRENNIKL  182 (228)
Q Consensus       143 ~~~i~~l~~~g~~V~~~~vii~~~~~~-~~~~~l~~~gi~~  182 (228)
                      .++++.|++.||.=+  .+.+.++.|. .+.+++.+.+++-
T Consensus       222 ~~aa~~Lk~~GA~~V--~~~~THgifs~~a~~~l~~~~i~~  260 (284)
T 1u9y_A          222 ATAVKLLKEQGAKKI--IAACVHPVLIGDALNKLYSAGVEE  260 (284)
T ss_dssp             HHHHHHHHHTTCCSE--EEEEEECCCCTTHHHHHHHHTCSE
T ss_pred             HHHHHHHHHCCCCEE--EEEEECCCCCHHHHHHHHHCCCCE
T ss_conf             999999986699869--999979738847999997389998