HHsearch alignment for GI: 254781012 and conserved domain: COG0044
>COG0044 PyrC Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism].
Probab=100.00 E-value=0 Score=556.14 Aligned_cols=327 Identities=20% Similarity=0.176 Sum_probs=278.3
Q ss_pred EEEECCCCEEEEECCC------HHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEE
Q ss_conf 5586466423750881------7889874987418873999838951489898999999999998386884699501345
Q gi|254781012|r 3 KISLRVPDDWHLHLRD------GEILKTVLRDTAKNFRRALVMPNIDPPIITVDDACAYRQRILNALPPEYDFSPLMTIY 76 (349)
Q Consensus 3 ~l~lp~~~D~HvH~Re------g~~~~~t~aa~aGG~TtV~~MPNT~Ppi~t~e~~~~~~~r~~~~~~~~~~~~~~~~~~ 76 (349)
T Consensus 49 ~~v~PG~ID~HVH~repg~~~ke~~~tgs~AAa~GG~Ttv~dmPnt~P~~~~~~~~~~~~~~a~----~~~~vd~~~~~~ 124 (430)
T COG0044 49 LLVLPGLVDLHVHFREPGFEHKETFETGSRAAAAGGVTTVVDMPNTKPPIDTAEALEDKLERAK----GKSVVDYAFYGG 124 (430)
T ss_pred CEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHH----CCCEEEEEEEEE
T ss_conf 8777777566773389984135568769999975892699977789999887999999998640----375478999876
Q ss_pred ECCCCCH-HHHHHHHHCCCEEEHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCC-----------
Q ss_conf 2789998-8998744068721022104551002565410068899999999873982220257555554-----------
Q gi|254781012|r 77 LTETTDP-DDVEKGFTSQLVQAIKLYFAGSTTNSHHGIRNIDRVMPVLERMETIGMPLCIHGEILNQDI----------- 144 (349)
Q Consensus 77 lt~~~~~-~~~~~~~~~~~~~~~k~~~~~~~~~~~~~v~~~~~~~~~le~~~~~~~~i~~H~E~~~~~~----------- 144 (349)
T Consensus 125 it~~~~~~~~~~~~~~---~~g~~~F~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~H~Ed~~~~~~~~~~~g~~~~ 196 (430)
T COG0044 125 LTKGNLGKLELTERGV---EAGFKGFMDD-----STGALDDDVLEEALEYAAELGALILVHAEDDDLIAEGVMNEGLRAP 196 (430)
T ss_pred EECCCCHHHHHHHHHH---CCCEEEEECC-----CCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCH
T ss_conf 4126510477664211---1546999569-----8765688999999999985598699971780355556751586532
Q ss_pred ----CCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCC----CCCEEEECCCCCCCHHHHHCCCCCCCEE
Q ss_conf ----30014676545789999962069539970578589999987057----3320230231003978861378883113
Q gi|254781012|r 145 ----DIFDRELMFIDKILDPLRNKLPNLKIILEHITTSNGIDYVNNAT----NIAGSITVHHLIINRNAIFHDGLNPHYY 216 (349)
Q Consensus 145 ----~~~~~E~~~~~~~l~~~~a~~~~~~iHi~HiST~~sv~lir~ak----~vtaEVTPHHL~lt~~d~~~~~~~~~~k 216 (349)
T Consensus 197 ~~~~~~~p~~aE~~~iar~~~la~~~g~~vhi~HiSt~~sv~li~~ak~~g~~vt~EvtphHL~l~~~~~~~--~~~~~k 274 (430)
T COG0044 197 ELGLAGRPPIAEASAIARDLELARATGARVHICHISTKESVELIRAAKAEGIRVTAEVTPHHLLLDEEDIED--LGTLAK 274 (430)
T ss_pred HHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCEECCHHHHHC--CCCCEE
T ss_conf 103468983778999999999999869968999548599999999987649955886272136656768532--474024
Q ss_pred ECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCC--CCCCCCCHHHHHHHHHH-HHHCCCCHHHHHHHHHH
Q ss_conf 2134699999999999997699418971388865313321545--77544543679999999-97206999999999824
Q gi|254781012|r 217 CLPIPKREKHRLSLRKAALSGNPRFFLGTDSAPHWDSSKESSC--GCAGIYTARNALNCLAQ-IFEEENKLENLESFVSI 293 (349)
Q Consensus 217 ~nPPlR~~~dr~aL~~ai~~G~i~d~I~TDHAPH~~eeK~~~~--~~~g~~~~~~~~~~~~~-~~~~~~~L~~l~~~~s~ 293 (349)
T Consensus 275 ~nPPLR~~~dr~aL~~~l~~G~I-D~iasDHaPht~eeK~~~f~~ap~G~~glE~~lpl~l~lv~~g~lsl~~~v~~~S~ 353 (430)
T COG0044 275 VNPPLRDEEDREALWEALKDGVI-DVIASDHAPHTLEEKRLPFEEAPSGIPGLETALPLLLTLVKKGRLSLERLVELLST 353 (430)
T ss_pred ECCCCCCHHHHHHHHHHHHCCCC-CEEECCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCC
T ss_conf 78999987899999999877987-68976899999788315320099987358889999999986588799999999741
Q ss_pred CCHHHCCCCC-------CCCEEEEEECCCCEEECHHHCCCCCCEEECCCCEEECCEEEE
Q ss_conf 3178818898-------885289994797178471122677771465797698338887
Q gi|254781012|r 294 NGATWYGIPV-------NTRKISLKRREQPIIFDEKITTSTGSITIFNPIFPLYWEVML 345 (349)
Q Consensus 294 npa~~~gl~~-------~~~~i~l~d~~~~~~v~~~~~~sk~~~tpF~~g~~l~w~V~~ 345 (349)
T Consensus 354 nPA~ifgl~~~g~i~~G~~ADl~lvD~~~~~~i~~~~~~sk~~~sPf~-G~~~~g~v~~ 411 (430)
T COG0044 354 NPARIFGLPPKGAIEEGADADLVLVDPDEEWTIRAEELYSKAKNSPFE-GFELKGRVVA 411 (430)
T ss_pred CHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEECHHHHHCCCCCCCCC-CCEEEEEEEE
T ss_conf 979983999887446799776799848987077536632114799988-9776224789