HHsearch alignment for GI: 254781012 and conserved domain: COG0418
>COG0418 PyrC Dihydroorotase [Nucleotide transport and metabolism].
Probab=100.00 E-value=0 Score=520.36 Aligned_cols=342 Identities=51% Similarity=0.932 Sum_probs=333.4
Q ss_pred CCEEEECCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCC
Q ss_conf 96558646642375088178898749874188739998389514898989999999999983868846995013452789
Q gi|254781012|r 1 MKKISLRVPDDWHLHLRDGEILKTVLRDTAKNFRRALVMPNIDPPIITVDDACAYRQRILNALPPEYDFSPLMTIYLTET 80 (349)
Q Consensus 1 ~~~l~lp~~~D~HvH~Reg~~~~~t~aa~aGG~TtV~~MPNT~Ppi~t~e~~~~~~~r~~~~~~~~~~~~~~~~~~lt~~ 80 (349)
T Consensus 2 ~~~l~i~rPdDwHlHLRdg~mL~~V~p~ts~~f~rAiIMPNL~pPvtt~~~a~aYr~rIl~a~p~~~~F~PLMtlYLtd~ 81 (344)
T COG0418 2 MQELTIRRPDDWHLHLRDGAMLKAVVPYTSRGFGRAIIMPNLVPPVTTVADALAYRERILKAVPAGHRFTPLMTLYLTDS 81 (344)
T ss_pred CEEEECCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC
T ss_conf 60365268661457751730888762543422334898678898710479999999999972857778863379984699
Q ss_pred CCHHHHHHHHHCCCEEEHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 99889987440687210221045510025654100688999999998739822202575555543001467654578999
Q gi|254781012|r 81 TDPDDVEKGFTSQLVQAIKLYFAGSTTNSHHGIRNIDRVMPVLERMETIGMPLCIHGEILNQDIDIFDRELMFIDKILDP 160 (349)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~v~~~~~~~~~le~~~~~~~~i~~H~E~~~~~~~~~~~E~~~~~~~l~~ 160 (349)
T Consensus 82 ~~peel~~a~~~g~i~a~KlYPaGaTTNS~~GV~~~~~~~pvle~Mq~~gmpLlvHGEvt~~~vDifdrE~~Fi~~vl~p 161 (344)
T COG0418 82 TTPEELEEAKAKGVIRAVKLYPAGATTNSDSGVTDIEKIYPVLEAMQKIGMPLLVHGEVTDAEVDIFDREAAFIESVLEP 161 (344)
T ss_pred CCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99899999985595789985258864467678573788789999999719868970465775456113578789999999
Q ss_pred HHHHHCCCEEEEECCCHHHHHHHHHHCC-CCCEEEECCCCCCCHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 9962069539970578589999987057-332023023100397886137888311321346999999999999976994
Q gi|254781012|r 161 LRNKLPNLKIILEHITTSNGIDYVNNAT-NIAGSITVHHLIINRNAIFHDGLNPHYYCLPIPKREKHRLSLRKAALSGNP 239 (349)
Q Consensus 161 ~~a~~~~~~iHi~HiST~~sv~lir~ak-~vtaEVTPHHL~lt~~d~~~~~~~~~~k~nPPlR~~~dr~aL~~ai~~G~i 239 (349)
T Consensus 162 l~~~fP~LKIV~EHiTT~dav~~v~~~~~nlaATIT~hHL~~nrnd~l~Ggi~Ph~fClPilKr~~hr~AL~~aa~sg~~ 241 (344)
T COG0418 162 LRQRFPKLKIVLEHITTKDAVEYVKDANNNLAATITPHHLLLNRNDMLVGGIRPHLFCLPILKRETHREALREAATSGHP 241 (344)
T ss_pred HHHHCCCCEEEEEEECCHHHHHHHHHCCCCEEEEEEHHHEEEEHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCC
T ss_conf 98658763699887150889999996486504673145602426566327878613551200654569999999846897
Q ss_pred EEEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHCCCCCCCCEEEEEECCCCEEE
Q ss_conf 18971388865313321545775445436799999999720699999999982431788188988852899947971784
Q gi|254781012|r 240 RFFLGTDSAPHWDSSKESSCGCAGIYTARNALNCLAQIFEEENKLENLESFVSINGATWYGIPVNTRKISLKRREQPIIF 319 (349)
Q Consensus 240 ~d~I~TDHAPH~~eeK~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~l~~~~s~npa~~~gl~~~~~~i~l~d~~~~~~v 319 (349)
T Consensus 242 kfFlGtDSAPH~~~~Ke~~cgcAG~fsap~al~~~AevFE~~naL~~LeaF~S~nGp~fYglp~n~~~itL~k~--~~~i 319 (344)
T COG0418 242 KFFLGTDSAPHARSRKESACGCAGIFSAPFALPLYAEVFEEENALDNLEAFASDNGPKFYGLPRNDKTITLVKE--EWQV 319 (344)
T ss_pred CEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEECCCCCCCEEEEEEC--CCCC
T ss_conf 27715898888654410056663101537689999999987267989998886548412156788863899843--5126
Q ss_pred CHHHCCCCCCEEECCCCEEECCEEE
Q ss_conf 7112267777146579769833888
Q gi|254781012|r 320 DEKITTSTGSITIFNPIFPLYWEVM 344 (349)
Q Consensus 320 ~~~~~~sk~~~tpF~~g~~l~w~V~ 344 (349)
T Consensus 320 P~~i~~g~~~vvpf~aGe~L~W~v~ 344 (344)
T COG0418 320 PESIPFGDDIVVPFRAGETLSWSVK 344 (344)
T ss_pred CCEECCCCCCEEEECCCCEEEEEEC
T ss_conf 6454168884677438972665549