HHsearch alignment for GI: 254781012 and conserved domain: PRK00369
>PRK00369 pyrC dihydroorotase; Provisional.
Probab=100.00 E-value=0 Score=502.67 Aligned_cols=305 Identities=18% Similarity=0.137 Sum_probs=233.4
Q ss_pred EEEECCCCEEEEECCC------HHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEE
Q ss_conf 5586466423750881------7889874987418873999838951489898999999999998386884699501345
Q gi|254781012|r 3 KISLRVPDDWHLHLRD------GEILKTVLRDTAKNFRRALVMPNIDPPIITVDDACAYRQRILNALPPEYDFSPLMTIY 76 (349)
Q Consensus 3 ~l~lp~~~D~HvH~Re------g~~~~~t~aa~aGG~TtV~~MPNT~Ppi~t~e~~~~~~~r~~~~~~~~~~~~~~~~~~ 76 (349)
T Consensus 44 ~~VlPG~ID~HvH~rePG~~~kEd~~sgt~AAaaGGvTtv~~mPnt~P~~~~~~~~~~~~~~~~~~----s~vd~~~~~~ 119 (393)
T PRK00369 44 SLILPGVIDMHVHLRGLKLSYKEDVASATSEAAYGGITLVADMPNTVPPLNTPEAIKEKLAELENY----SRVDYGVYSG 119 (393)
T ss_pred CEEECCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCC----CCCCEEEEEE
T ss_conf 988069888044469999876575999999998099489998999999989899999999985648----7246899942
Q ss_pred ECCCCCHHHHHHHHHCCCEEEHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHH-HHHHHHH
Q ss_conf 278999889987440687210221045510025654100688999999998739822202575555543001-4676545
Q gi|254781012|r 77 LTETTDPDDVEKGFTSQLVQAIKLYFAGSTTNSHHGIRNIDRVMPVLERMETIGMPLCIHGEILNQDIDIFD-RELMFID 155 (349)
Q Consensus 77 lt~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~v~~~~~~~~~le~~~~~~~~i~~H~E~~~~~~~~~~-~E~~~~~ 155 (349)
T Consensus 120 v~~~--~~~l~---~lg-~~g~k~f~~-------d-----~~~~~~~~~~~~~~~l~~~HaE~~~~~~~~~~~~r~~~~E 181 (393)
T PRK00369 120 VTKE--YEEVD---KLP-IAGYKIYPE-------D-----LEREETKRVLEKSKKLKILHPEIPLALKGLRRLRRNCWAE 181 (393)
T ss_pred CCCC--HHHHH---HCC-CCEEEEECC-------C-----CCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCHHHH
T ss_conf 1674--55576---466-975999888-------8-----8789999999867997099478877763525520745899
Q ss_pred HHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHH
Q ss_conf 78999996206953997057858999998705733202302310039788613788831132134699999999999997
Q gi|254781012|r 156 KILDPLRNKLPNLKIILEHITTSNGIDYVNNATNIAGSITVHHLIINRNAIFHDGLNPHYYCLPIPKREKHRLSLRKAAL 235 (349)
Q Consensus 156 ~~l~~~~a~~~~~~iHi~HiST~~sv~lir~ak~vtaEVTPHHL~lt~~d~~~~~~~~~~k~nPPlR~~~dr~aL~~ai~ 235 (349)
T Consensus 182 ~~-ai~-~~~~~ar~Hi~h~Ss~e~ir~AK~-~G~t~Ev~phhL~l~~e~------~~~~kv~PPLR~~~D~~aL~~~l~ 252 (393)
T PRK00369 182 IA-ALE-LVKGAANVHITHASNPETVRIAKK-LGFTVDITPHHLLVDGER------DCLSKVNPPIRDYGERLKLLKALF 252 (393)
T ss_pred HH-HHH-HHHHCCCEEEEECCCHHHHHHHHH-CCCEEEEEEHHHHCCCCC------CCCCCCCCCCCCHHHHHHHHHHHC
T ss_conf 99-999-986149699993684999999986-699079975684025535------667313899899789999998744
Q ss_pred CCCCEEEEECCCCCCCHHHHHCCCC--CCCCCCHHHHHHHHHH-HHHCCCCHHHHHHHHHHCCHHHCCCCC------CCC
Q ss_conf 6994189713888653133215457--7544543679999999-972069999999998243178818898------885
Q gi|254781012|r 236 SGNPRFFLGTDSAPHWDSSKESSCG--CAGIYTARNALNCLAQ-IFEEENKLENLESFVSINGATWYGIPV------NTR 306 (349)
Q Consensus 236 ~G~i~d~I~TDHAPH~~eeK~~~~~--~~g~~~~~~~~~~~~~-~~~~~~~L~~l~~~~s~npa~~~gl~~------~~~ 306 (349)
T Consensus 253 d--I-D~IaSDHaPh~~eeK~~~f~~ap~Gi~GlEt~lplll~~V~~g~lsl~~lv~l~s~nPAki~GL~kG~i~~G~dA 329 (393)
T PRK00369 253 E--V-DAVASDHAPHSSWEKWMPFEICPPGIAALSFTPPFIYTLVFKGLLSIERAVSLTSTNPSRILGIPYGEIREGYRA 329 (393)
T ss_pred C--C-CEEEECCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 7--7-889817888997881565435468704078899999999983889999999999887999959888860799976
Q ss_pred EEEEEECCCCEEECHHHCCCCCCEEECCCCEEECCEEEE
Q ss_conf 289994797178471122677771465797698338887
Q gi|254781012|r 307 KISLKRREQPIIFDEKITTSTGSITIFNPIFPLYWEVML 345 (349)
Q Consensus 307 ~i~l~d~~~~~~v~~~~~~sk~~~tpF~~g~~l~w~V~~ 345 (349)
T Consensus 330 Dlvi~D~~~-~~~~~~--~Sk~~~tPfe-G~~l~G~v~~ 364 (393)
T PRK00369 330 NFTVIQLER-WRYSTK--YSKVIETPLD-GFSLDAAVYA 364 (393)
T ss_pred CEEEEECCC-CEECCC--HHCCCCCCCC-CCEEEEEEEE
T ss_conf 089993875-565342--1058988867-9688778999