HHsearch alignment for GI: 254781012 and conserved domain: PRK06886
>PRK06886 hypothetical protein; Validated.
Probab=98.77 E-value=4.6e-06 Score=56.94 Aligned_cols=263 Identities=14% Similarity=0.079 Sum_probs=137.5
Q ss_pred EEECCCCEEEEECCC--------------H-------------------HHH----HHHHHHHCCCCEEEEECCCCCCCC
Q ss_conf 586466423750881--------------7-------------------889----874987418873999838951489
Q gi|254781012|r 4 ISLRVPDDWHLHLRD--------------G-------------------EIL----KTVLRDTAKNFRRALVMPNIDPPI 46 (349)
Q Consensus 4 l~lp~~~D~HvH~Re--------------g-------------------~~~----~~t~aa~aGG~TtV~~MPNT~Ppi 46 (349)
T Consensus 17 ~~~gGFVd~H~HLDka~t~~~~~~~~~~sgtL~e~i~~~~~~K~~~T~eDv~~Ra~~~l~~~ia~Gt~aiRTHVDvDp~~ 96 (328)
T PRK06886 17 IKKGGWVNAHAHADRAFTMTPEKIGIYHNSNLQQKWDLVDEVKRTSSVDDYYARFCQSIELMISQGVTAFGTFVDIDPVC 96 (328)
T ss_pred HHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf 86088025361325363178866575567579999999998500288999999999999999981953157555136543
Q ss_pred CC--HHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHCCCEEEHHHCCCCCEECCCCC-CCHHHHHHHHH
Q ss_conf 89--8999999999998386884699501345278999889987440687210221045510025654-10068899999
Q gi|254781012|r 47 IT--VDDACAYRQRILNALPPEYDFSPLMTIYLTETTDPDDVEKGFTSQLVQAIKLYFAGSTTNSHHG-IRNIDRVMPVL 123 (349)
Q Consensus 47 ~t--~e~~~~~~~r~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~-v~~~~~~~~~l 123 (349)
T Consensus 97 gl~~l~a~~~lre~~~~~--idlQivafpq~G~~~~~~~~~l~~~~~~vDvV------GGiP~~d~~~~~~~~~~ld~lf 168 (328)
T PRK06886 97 EDRAIIAAHKAREVYKSD--IILKFANQTLKGVIEPTAKKWFDIGSEMVDMI------GGLPYRDELDYGRGLEAMDILL 168 (328)
T ss_pred CHHHHHHHHHHHHHHHCC--EEEEEECCCCCCCCCCHHHHHHHHHHHHCCCC------CCCCCCCCCCCHHHHHHHHHHH
T ss_conf 447899999999986277--46999567631225816999999998755744------8876778666101699999999
Q ss_pred HHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHH---------HHHHHCCCCCEEE
Q ss_conf 9998739822202575555543001467654578999996206953997057858999---------9987057332023
Q gi|254781012|r 124 ERMETIGMPLCIHGEILNQDIDIFDRELMFIDKILDPLRNKLPNLKIILEHITTSNGI---------DYVNNATNIAGSI 194 (349)
Q Consensus 124 e~~~~~~~~i~~H~E~~~~~~~~~~~E~~~~~~~l~~~~a~~~~~~iHi~HiST~~sv---------~lir~ak~vtaEV 194 (349)
T Consensus 169 ~lA~~~g~~vD~H~De~~---dp~~~~le---~la~~t~~~G~~GRVt~sH~~sL~~~~~~~~~~l~~~la~a-gi~vis 241 (328)
T PRK06886 169 DKAKSLGIMCHVHVDQFN---TPKEKETE---QLCDKTIEHGMQGRVVAIHGISIGAHSKEYRYKLYEKMRDA-QMMMIA 241 (328)
T ss_pred HHHHHCCCCEEEECCCCC---CCCHHHHH---HHHHHHHHHCCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHC-CCCEEE
T ss_conf 999984997476018999---91176899---99999999577997775330146438999999999999984-996998
Q ss_pred ECCCCCCCHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf 02310039788613788831132134699999999999997699418971388865313321545775445436799999
Q gi|254781012|r 195 TVHHLIINRNAIFHDGLNPHYYCLPIPKREKHRLSLRKAALSGNPRFFLGTDSAPHWDSSKESSCGCAGIYTARNALNCL 274 (349)
Q Consensus 195 TPHHL~lt~~d~~~~~~~~~~k~nPPlR~~~dr~aL~~ai~~G~i~d~I~TDHAPH~~eeK~~~~~~~g~~~~~~~~~~~ 274 (349)
T Consensus 242 ~P~~-nl---~l-~gr~d----~~P~~RgvtpV~eL~~~---G-V~Va~G~Dni-------~Dpw~P~G~gDmL~~~~l~ 301 (328)
T PRK06886 242 CPMA-WI---DS-NRKED----LMPFHNALTPADEMIPE---G-ITVAIGTDNI-------CDYMVPLCEGDMWQELSLL 301 (328)
T ss_pred CCHH-HH---HC-CCCCC----CCCCCCCCCCHHHHHHC---C-CEEEEECCCC-------CCCCCCCCCCCHHHHHHHH
T ss_conf 8125-75---50-68778----78877888889999977---9-9599815788-------7888699776499999999
Q ss_pred HHHHHCCCCHHHHHHHHHHCCHHHCCCC
Q ss_conf 9997206999999999824317881889
Q gi|254781012|r 275 AQIFEEENKLENLESFVSINGATWYGIP 302 (349)
Q Consensus 275 ~~~~~~~~~L~~l~~~~s~npa~~~gl~ 302 (349)
T Consensus 302 ~~~~-~~~~~e~~~~~~T~n~ak~lgl~ 328 (328)
T PRK06886 302 AAGC-RFPNLEEMVNIASINGRKVLGLE 328 (328)
T ss_pred HHHH-CCCCHHHHHHHHCCCHHHHHCCC
T ss_conf 9983-65889999888603288873889