HHsearch alignment for GI: 254781012 and conserved domain: PRK07213

Probab=98.99  E-value=6.5e-07  Score=62.19  Aligned_cols=162  Identities=14%  Similarity=0.165  Sum_probs=85.6

Q ss_pred             HHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH-H-HCCCEEEEECCCHHHHHHHHHHCCCCCE
Q ss_conf             0688999999998739822202575555543001467654578999996-2-0695399705785899999870573320
Q gi|254781012|r  115 NIDRVMPVLERMETIGMPLCIHGEILNQDIDIFDRELMFIDKILDPLRN-K-LPNLKIILEHITTSNGIDYVNNATNIAG  192 (349)
Q Consensus       115 ~~~~~~~~le~~~~~~~~i~~H~E~~~~~~~~~~~E~~~~~~~l~~~~a-~-~~~~~iHi~HiST~~sv~lir~ak~vta  192 (349)
T Consensus       179 s~e~l~~~~~~a~~~~~~~~~H~aE~~~e~~~-~~~~-~g~~~ve~l~~~g~~~~~lvH~v~l~-d~ei~lla~~g-~~v  254 (378)
T PRK07213        179 SDEELKFICKECRKAGKIASIHAAEHKGSVEY-SLEK-YGITEIERLIDLKFKPDFLVHATHPS-SDDLSLLKENN-IPV  254 (378)
T ss_pred             CHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH-HHHH-HCCCHHHHHHHCCCCCCEEEECCCCC-HHHHHHHHHCC-CCE
T ss_conf             99999999999997699379961797789999-9998-49987899985799988289835799-99999999759-957


Q ss_pred             EEECCCCCCCHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCHHHHHH
Q ss_conf             23023100397886137888311321346999999999999976994189713888653133215457754454367999
Q gi|254781012|r  193 SITVHHLIINRNAIFHDGLNPHYYCLPIPKREKHRLSLRKAALSGNPRFFLGTDSAPHWDSSKESSCGCAGIYTARNALN  272 (349)
Q Consensus       193 EVTPHHL~lt~~d~~~~~~~~~~k~nPPlR~~~dr~aL~~ai~~G~i~d~I~TDHAPH~~eeK~~~~~~~g~~~~~~~~~  272 (349)
T Consensus       255 ~hcP~S----N-~~L~~--G-----~~pv---------~~~~~~Gv~-V~LGTD~~~sn~~---------dm~~---em~  300 (378)
T PRK07213        255 VVCPRA----N-ASFNV--G-----IPPI---------SEMLEYNIK-LGLGTDNFMANSP---------SIFK---EMD  300 (378)
T ss_pred             EECHHH----H-HHHCC--C-----CCCH---------HHHHHCCCC-EEEECCCCCCCCH---------HHHH---HHH
T ss_conf             988376----8-76347--9-----9889---------999978995-8997488866886---------5999---999


Q ss_pred             HHHHHHHCCCCHHHHHHHHHHCCHHHCCCC-------CCCCEEEEEECCCC
Q ss_conf             999997206999999999824317881889-------88852899947971
Q gi|254781012|r  273 CLAQIFEEENKLENLESFVSINGATWYGIP-------VNTRKISLKRREQP  316 (349)
Q Consensus       273 ~~~~~~~~~~~L~~l~~~~s~npa~~~gl~-------~~~~~i~l~d~~~~  316 (349)
T Consensus       301 ~~~--~~~~~~~~e~L~mAT~~GA~aLg~~~~GsLe~Gk~ADli~id~~~~  349 (378)
T PRK07213        301 FIY--KIYHIDPKEILKMATINGAEILGLQNTGLIKEGFKADFTFIKNGNI  349 (378)
T ss_pred             HHH--HHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCC
T ss_conf             999--8739999999999999999980998877707888761999989865