HHsearch alignment for GI: 254781012 and conserved domain: PRK07583
>PRK07583 cytosine deaminase; Validated.
Probab=99.06 E-value=2.8e-07 Score=64.42 Aligned_cols=276 Identities=12% Similarity=0.055 Sum_probs=140.6
Q ss_pred CEEEECCCCEEEEECCC-----------HHH----H---H-----------------HHHHHHCCCCEEEEECCCCCCCC
Q ss_conf 65586466423750881-----------788----9---8-----------------74987418873999838951489
Q gi|254781012|r 2 KKISLRVPDDWHLHLRD-----------GEI----L---K-----------------TVLRDTAKNFRRALVMPNIDPPI 46 (349)
Q Consensus 2 ~~l~lp~~~D~HvH~Re-----------g~~----~---~-----------------~t~aa~aGG~TtV~~MPNT~Ppi 46 (349)
T Consensus 70 G~LvlPgfvd~H~HLDK~~~~~r~pn~~gtl~~ai~a~~~~~~~~~t~edv~~Ra~~~l~~a~a~Gtt~iRTHvDv~~~~ 149 (437)
T PRK07583 70 GRMVWPCFVDMHTHLDKGHIWPRSPNPDGTFPGALDAVTADREAHWSAEDLYRRMEFGLRCAYAHGTAAIRTHLDSFGPQ 149 (437)
T ss_pred CCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf 99879776673268778984787878898778999988776432388899999999999999970874799984255884
Q ss_pred CC--HHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHH-CCCEEEHHHCCCCCEECCCCCCCHHHHHHHHH
Q ss_conf 89--8999999999998386884699501345278999889987440-68721022104551002565410068899999
Q gi|254781012|r 47 IT--VDDACAYRQRILNALPPEYDFSPLMTIYLTETTDPDDVEKGFT-SQLVQAIKLYFAGSTTNSHHGIRNIDRVMPVL 123 (349)
Q Consensus 47 ~t--~e~~~~~~~r~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~-~~~~~~~k~~~~~~~~~~~~~v~~~~~~~~~l 123 (349)
T Consensus 150 ~~~~~e~~~~lr~~~~~~i--~lq~VA~~p~~~~~~~~~~~L~~~~~~~g~vv------GGv~~~~---~d~~~~l~~vf 218 (437)
T PRK07583 150 AAISWEVFAELREAWAGRI--TLQAVSLVPLDYYLTDAGERLADLVAEAGGLL------GGVTYMN---PDLDAQLDRLF 218 (437)
T ss_pred CHHHHHHHHHHHHHHCCCC--EEEEEEEECCCCCCCCHHHHHHHHHHHHCCEE------CCCCCCC---CCHHHHHHHHH
T ss_conf 0458999999999832660--45456420753347827999999999719847------3878988---57999999999
Q ss_pred HHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCH------H---HHHHHHHHCCCCCEEE
Q ss_conf 999873982220257555554300146765457899999620695399705785------8---9999987057332023
Q gi|254781012|r 124 ERMETIGMPLCIHGEILNQDIDIFDRELMFIDKILDPLRNKLPNLKIILEHITT------S---NGIDYVNNATNIAGSI 194 (349)
Q Consensus 124 e~~~~~~~~i~~H~E~~~~~~~~~~~E~~~~~~~l~~~~a~~~~~~iHi~HiST------~---~sv~lir~ak~vtaEV 194 (349)
T Consensus 219 ~lA~~~g~~vDiHlde~~d------~~~~~l~~la~~t~~~g~~grVt~sH~~sL~~~~~~~~~~~~~~lA~ag-i~vvs 291 (437)
T PRK07583 219 ALAAERGLDLDLHVDETGD------PASRTLKAVAEAALRNGFEGKVTCGHCCSLAVQPEEQAQETLALVAEAG-IAIVS 291 (437)
T ss_pred HHHHHHCCCCCCCCCCCCC------HHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCC-CCEEE
T ss_conf 9999809995323578887------1799999999999980999865520234553299999999999999839-94897
Q ss_pred ECC-CCCCCHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 023-1003978861378883113213469999999999999769941897138886531332154577544543679999
Q gi|254781012|r 195 TVH-HLIINRNAIFHDGLNPHYYCLPIPKREKHRLSLRKAALSGNPRFFLGTDSAPHWDSSKESSCGCAGIYTARNALNC 273 (349)
Q Consensus 195 TPH-HL~lt~~d~~~~~~~~~~k~nPPlR~~~dr~aL~~ai~~G~i~d~I~TDHAPH~~eeK~~~~~~~g~~~~~~~~~~ 273 (349)
T Consensus 292 lP~~nl~Lq~------R~~~---~~P~~Rgv~pv~eL~~---aGV-~Valg~Dni-------~Dpw~P~G~gDmLe~~~~ 351 (437)
T PRK07583 292 LPMCNLYLQD------RQPG---RTPRWRGVTLVHELKA---AGI-PVAFASDNC-------RDPFYAYGDHDMLEVFRE 351 (437)
T ss_pred CCCCCEECCC------CCCC---CCCCCCCCCCHHHHHH---CCC-EEEEECCCC-------CCCCCCCCCCCHHHHHHH
T ss_conf 5652200036------6777---7887688778699997---898-189937988-------788776889889999999
Q ss_pred HHHHHHCCCCHHHHHHHHHHCCHHHCCCC-------CCCCEEEEEECCC
Q ss_conf 99997206999999999824317881889-------8885289994797
Q gi|254781012|r 274 LAQIFEEENKLENLESFVSINGATWYGIP-------VNTRKISLKRREQ 315 (349)
Q Consensus 274 ~~~~~~~~~~L~~l~~~~s~npa~~~gl~-------~~~~~i~l~d~~~ 315 (349)
T Consensus 352 a~~~~~ld~~~~~al~~iT~~~A~~lgl~~~G~i~~G~~ADlVl~da~~ 400 (437)
T PRK07583 352 AVRILHLDHPYDDWPAAVTTTPADIMGLPDLGRIAVGAPADLVIFKARS 400 (437)
T ss_pred HHHHHCCCCCHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCEEEEECCC
T ss_conf 9999744811999999854239987599766776899954289995899