HHsearch alignment for GI: 254781012 and conserved domain: PRK09060
>PRK09060 dihydroorotase; Validated.
Probab=100.00 E-value=0 Score=556.98 Aligned_cols=331 Identities=15% Similarity=0.129 Sum_probs=273.6
Q ss_pred CEEEECCCCEEEEECCC------HHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEE
Q ss_conf 65586466423750881------788987498741887399983895148989899999999999838688469950134
Q gi|254781012|r 2 KKISLRVPDDWHLHLRD------GEILKTVLRDTAKNFRRALVMPNIDPPIITVDDACAYRQRILNALPPEYDFSPLMTI 75 (349)
Q Consensus 2 ~~l~lp~~~D~HvH~Re------g~~~~~t~aa~aGG~TtV~~MPNT~Ppi~t~e~~~~~~~r~~~~~~~~~~~~~~~~~ 75 (349)
T Consensus 51 G~~v~PG~ID~HvH~~ePG~~~ked~~sgs~AAa~GGvTtv~~mPnt~P~~~~~~~~~~~~~~a~~~~~----vd~~~~~ 126 (444)
T PRK09060 51 GLHVLPGVIDSQVHFREPGLEHKEDLETGSRAAVLGGVTAVFEMPNTNPLTTTAEALADKLARARHRMH----CDFAFYV 126 (444)
T ss_pred CCEEECCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCC----CEEEEEE
T ss_conf 999957989755057999976524465534989809937999777889996889999999998742654----1156777
Q ss_pred EECCCCCHHHHHHHHHCCCEEEHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCC------------
Q ss_conf 52789998899874406872102210455100256541006889999999987398222025755555------------
Q gi|254781012|r 76 YLTETTDPDDVEKGFTSQLVQAIKLYFAGSTTNSHHGIRNIDRVMPVLERMETIGMPLCIHGEILNQD------------ 143 (349)
Q Consensus 76 ~lt~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~v~~~~~~~~~le~~~~~~~~i~~H~E~~~~~------------ 143 (349)
T Consensus 127 g~~~~-~~~~l~el~~~~g~~~~k~f~~~s~--g~~~~~d~~~l~~~~~~~---~~~~~~H~Ed~~~l~~~~~~~~~g~~ 200 (444)
T PRK09060 127 GGTRD-NADELAELERLPGCAGVKVFMGSST--GDLLVEDDEGLRRILRNG---RRRAAFHSEDEYRLRERKGLRVEGDP 200 (444)
T ss_pred EECCC-CHHHHHHHHHHHCCCEEEEEECCCC--CCEEECCHHHHHHHHHHC---CCCEEEECCCHHHHHHCHHHCCCCCH
T ss_conf 43278-7789999985103654899841777--861006999999999854---87338734788998622232127997
Q ss_pred ---CCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCC-CCCEEEECCCCCCCHHHHHCCCCCCCEEECC
Q ss_conf ---430014676545789999962069539970578589999987057-3320230231003978861378883113213
Q gi|254781012|r 144 ---IDIFDRELMFIDKILDPLRNKLPNLKIILEHITTSNGIDYVNNAT-NIAGSITVHHLIINRNAIFHDGLNPHYYCLP 219 (349)
Q Consensus 144 ---~~~~~~E~~~~~~~l~~~~a~~~~~~iHi~HiST~~sv~lir~ak-~vtaEVTPHHL~lt~~d~~~~~~~~~~k~nP 219 (349)
T Consensus 201 ~~~~~~r~~~~e~~ai~r~i~la~~tg~~lhi~HvSt~~~~~~i~~ak~~vt~E~~ph~L~l~~~d~~~-~~g~~~k~~P 279 (444)
T PRK09060 201 RSHPVWRDEEAALLATRRLVRLARETGRRIHVLHVSTAEEIDFLADHKDVATVEVTPHHLTLAAPDCYE-RLGTLAQMNP 279 (444)
T ss_pred HHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCEEEEECHHHCCCHHHHHH-CCCCEEEECC
T ss_conf 674555888999999999999999879937999558699999999708875899962052085166651-4496399748
Q ss_pred CCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCC--CCCCCCHHHHHHHHHH-HHHCCCCHHHHHHHHHHCCH
Q ss_conf 46999999999999976994189713888653133215457--7544543679999999-97206999999999824317
Q gi|254781012|r 220 IPKREKHRLSLRKAALSGNPRFFLGTDSAPHWDSSKESSCG--CAGIYTARNALNCLAQ-IFEEENKLENLESFVSINGA 296 (349)
Q Consensus 220 PlR~~~dr~aL~~ai~~G~i~d~I~TDHAPH~~eeK~~~~~--~~g~~~~~~~~~~~~~-~~~~~~~L~~l~~~~s~npa 296 (349)
T Consensus 280 PLR~~~d~~aL~~~l~~G~I-D~I~SDH~P~~~~~K~~~f~~a~~G~~glEt~lplll~~v~~g~lsl~~~v~~~s~nPA 358 (444)
T PRK09060 280 PVRDARHRDALWRGVRQGIV-DVLGSDHAPHTLEEKAKPYPASPSGMTGVQTLVPVMLDHVNAGRLSLERFVDLTSAGPA 358 (444)
T ss_pred CCCCHHHHHHHHHHHHCCCC-CEEECCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 98997999999999866996-09970897889788578764113897308879999999998298329999999717499
Q ss_pred HHCCCCC-------CCCEEEEEECCCCEEECHHHCCCCCCEEECCCCEEECCEEEE
Q ss_conf 8818898-------885289994797178471122677771465797698338887
Q gi|254781012|r 297 TWYGIPV-------NTRKISLKRREQPIIFDEKITTSTGSITIFNPIFPLYWEVML 345 (349)
Q Consensus 297 ~~~gl~~-------~~~~i~l~d~~~~~~v~~~~~~sk~~~tpF~~g~~l~w~V~~ 345 (349)
T Consensus 359 ki~GL~~kG~i~~G~dADlvi~Dp~~~~~v~~~~~~sk~~~spf~-G~~l~G~v~~ 413 (444)
T PRK09060 359 RIFGIAGKGRIAVGYDADFTIVDLKRRETITNEWIASRAGWTPYD-GKEVTGWPVG 413 (444)
T ss_pred HHHCCCCCCCCCCCCCCCEEEECCCCCEEECHHHCCCCCCCCCCC-CCEEEEEEEE
T ss_conf 984989887357999665899959997898846565768867767-9888768999