HHsearch alignment for GI: 254781012 and conserved domain: PRK09228

Probab=98.85  E-value=1.8e-06  Score=59.40  Aligned_cols=73  Identities=14%  Similarity=0.052  Sum_probs=44.0

Q ss_pred             HHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHH---HHCCCCHHHHHHHHHHCCHHHCCCC----
Q ss_conf             999997699418971388865313321545775445436799999999---7206999999999824317881889----
Q gi|254781012|r  230 LRKAALSGNPRFFLGTDSAPHWDSSKESSCGCAGIYTARNALNCLAQI---FEEENKLENLESFVSINGATWYGIP----  302 (349)
Q Consensus       230 L~~ai~~G~i~d~I~TDHAPH~~eeK~~~~~~~g~~~~~~~~~~~~~~---~~~~~~L~~l~~~~s~npa~~~gl~----  302 (349)
T Consensus       305 ~~~l~~~Gv~-v~LGTD~~~~~s------~------~~~~~m~~a~~~~~~~~~~lt~~eaL~~ATi~GAraLGl~d~iG  371 (429)
T PRK09228        305 LKRAWAAGVR-VGLATDVGGGTS------F------SMLQTMNEAYKVAQLQGYRLSPFQAFYLATLGGARALGLDDRIG  371 (429)
T ss_pred             HHHHHHCCCC-EEEECCCCCCCC------C------CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf             8999746993-799637899998------1------69999999999971269999999999999999999848999633


Q ss_pred             ----CCCCEEEEEECCC
Q ss_conf             ----8885289994797
Q gi|254781012|r  303 ----VNTRKISLKRREQ  315 (349)
Q Consensus       303 ----~~~~~i~l~d~~~  315 (349)
T Consensus       372 sLe~Gk~ADlvvlD~~~  388 (429)
T PRK09228        372 NLAPGKEADFVVLDPAA  388 (429)
T ss_pred             EECCCCCCCEEEECCCC
T ss_conf             04887876889996999