HHsearch alignment for GI: 254781012 and conserved domain: PRK13404
>PRK13404 dihydropyrimidinase; Provisional.
Probab=100.00 E-value=0 Score=502.64 Aligned_cols=332 Identities=13% Similarity=0.112 Sum_probs=262.8
Q ss_pred CEEEECCCCEEEEECCC---------HHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 65586466423750881---------788987498741887399983895148989899999999999838688469950
Q gi|254781012|r 2 KKISLRVPDDWHLHLRD---------GEILKTVLRDTAKNFRRALVMPNIDPPIITVDDACAYRQRILNALPPEYDFSPL 72 (349)
Q Consensus 2 ~~l~lp~~~D~HvH~Re---------g~~~~~t~aa~aGG~TtV~~MPNT~Ppi~t~e~~~~~~~r~~~~~~~~~~~~~~ 72 (349)
T Consensus 49 G~~V~PG~ID~HvH~~~p~~~G~~~~ed~~tgs~aAa~GGvTtvv~~~~~~~~~~~~~~~~~~~~~a~~~----~~vd~~ 124 (476)
T PRK13404 49 GRLVLPGGVDSHCHIDQPSSDGIMMADDFESGTVSAAFGGTTTVIPFAAQHRGQSLRAAVEDYHARAAGN----AVIDYA 124 (476)
T ss_pred CCEEECCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCC----CEEEEE
T ss_conf 9989078887235779876688452230999999998588149971688999987699999999984368----558764
Q ss_pred EEEEECC---CCCHHHHHHHHHCCCEEEHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCC-----
Q ss_conf 1345278---99988998744068721022104551002565410068899999999873982220257555554-----
Q gi|254781012|r 73 MTIYLTE---TTDPDDVEKGFTSQLVQAIKLYFAGSTTNSHHGIRNIDRVMPVLERMETIGMPLCIHGEILNQDI----- 144 (349)
Q Consensus 73 ~~~~lt~---~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~v~~~~~~~~~le~~~~~~~~i~~H~E~~~~~~----- 144 (349)
T Consensus 125 ~~~~~~~~~~~~~~~~l~~l~~~-G~~~~k~~~~~----~~~~~~-d~~l~~~~~~a~~~g~~v~~HaE~~~~~~~~~~~ 198 (476)
T PRK13404 125 FHLIVADPTPEVLEEELPALIAR-GYTSFKVFMTY----DLLKLG-DREILDVLTVARRHGAMVMVHAENNDCIAWLTKR 198 (476)
T ss_pred EEEEEECCCHHHHHHHHHHHHHC-CCCEEEEEECC----CCCCCC-HHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHH
T ss_conf 57787348744689999999977-96669998548----996338-2999999999986398799944887899999999
Q ss_pred -------------CCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCC----CCCEEEECCCCCCCHHHHH
Q ss_conf -------------30014676545789999962069539970578589999987057----3320230231003978861
Q gi|254781012|r 145 -------------DIFDRELMFIDKILDPLRNKLPNLKIILEHITTSNGIDYVNNAT----NIAGSITVHHLIINRNAIF 207 (349)
Q Consensus 145 -------------~~~~~E~~~~~~~l~~~~a~~~~~~iHi~HiST~~sv~lir~ak----~vtaEVTPHHL~lt~~d~~ 207 (349)
T Consensus 199 ~~~~G~~~~~~~~~~rP~~~E~~ai~r~~~la~~tg~~lhi~HiSs~~~~~~i~~ak~~G~~Vt~Et~ph~L~lt~~d~~ 278 (476)
T PRK13404 199 LLAAGLTAPKYHAISRPMLAEREATHRAISLAELVDVPILIVHVSTREAAEQIRRARGRGLKIFAETCPQYLFLTAEDLD 278 (476)
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCHHHHCCHHHHC
T ss_conf 98668975101545588999999999999999985997689965879999999999986991323214003208898967
Q ss_pred CCC-CCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHC--------CC--CCCCCCCHHHHHHHHHH
Q ss_conf 378-88311321346999999999999976994189713888653133215--------45--77544543679999999
Q gi|254781012|r 208 HDG-LNPHYYCLPIPKREKHRLSLRKAALSGNPRFFLGTDSAPHWDSSKES--------SC--GCAGIYTARNALNCLAQ 276 (349)
Q Consensus 208 ~~~-~~~~~k~nPPlR~~~dr~aL~~ai~~G~i~d~I~TDHAPH~~eeK~~--------~~--~~~g~~~~~~~~~~~~~ 276 (349)
T Consensus 279 ~~~~~g~~~~~~PPlR~~~d~~aL~~~l~~G~i-d~i~sDHaP~~~~~~~~~~~~~~~~~f~~~~~Gipg~e~~lp~l~~ 357 (476)
T PRK13404 279 RPGMEGAKYICSPPPRDAANQEALWQGLELGTF-ESFSSDHAPFRFDDTAGKLAAGAEPSFPQIANGIPGVETRLPLLFS 357 (476)
T ss_pred CCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCC-EEEECCCCCCCCCCHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHH
T ss_conf 667556325716998876679999975625973-4997265641131101112046778853478988405678999989
Q ss_pred --HHHCCCCHHHHHHHHHHCCHHHCCCCCC--------CCEEEEEECCCCEEECHHHCCCCCCEEECCCCEEECCEEEE
Q ss_conf --9720699999999982431788188988--------85289994797178471122677771465797698338887
Q gi|254781012|r 277 --IFEEENKLENLESFVSINGATWYGIPVN--------TRKISLKRREQPIIFDEKITTSTGSITIFNPIFPLYWEVML 345 (349)
Q Consensus 277 --~~~~~~~L~~l~~~~s~npa~~~gl~~~--------~~~i~l~d~~~~~~v~~~~~~sk~~~tpF~~g~~l~w~V~~ 345 (349)
T Consensus 358 ~~v~~g~lsl~~~v~~~s~nPAki~Gl~~~KG~i~~G~dADlvI~Dp~~~~~v~~~~~~sk~~~sp~~-G~~~~G~v~~ 435 (476)
T PRK13404 358 EGVVKGRISLNQFVALTSTNPAKLYGLYPRKGAIAIGADADIAIWDPDEEVTISNADLHHAADYTPFE-GMRVTGWPVT 435 (476)
T ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEECHHHCCCCCCCCCCC-CCEEEEEEEE
T ss_conf 99982998699999999888999839887887446898432999939986898825562538878807-9888889999