HHsearch alignment for GI: 254781012 and conserved domain: TIGR03178
>TIGR03178 allantoinase allantoinase. This enzyme carries out the first step in the degradation of allantoin, a ring-opening hydrolysis. The seed members of this model are all in the vicinity of other genes involved in the processes of xanthine/urate/allantoin catabolism. Although not included in the seed, many eukaryotic homologs of this family are included above the trusted cutoff. Below the noise cutoff are related hydantoinases.
Probab=100.00 E-value=0 Score=431.35 Aligned_cols=332 Identities=14% Similarity=0.127 Sum_probs=260.9
Q ss_pred EEEECCCCEEEEECCC------HHHHHHHHHHHCCCCEEEEECC-CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEE
Q ss_conf 5586466423750881------7889874987418873999838-95148989899999999999838688469950134
Q gi|254781012|r 3 KISLRVPDDWHLHLRD------GEILKTVLRDTAKNFRRALVMP-NIDPPIITVDDACAYRQRILNALPPEYDFSPLMTI 75 (349)
Q Consensus 3 ~l~lp~~~D~HvH~Re------g~~~~~t~aa~aGG~TtV~~MP-NT~Ppi~t~e~~~~~~~r~~~~~~~~~~~~~~~~~ 75 (349)
T Consensus 47 ~~V~PGfID~H~H~~~pg~~~~e~~~t~~~aa~~gGvTtv~~~~~~~~p~~~~~~~l~~~~~~~~----~~~~vd~~~~~ 122 (442)
T TIGR03178 47 LVVFPGVVDTHVHINEPGRTEWEGFETGTRAAAAGGITTFIDMPLNSIPPTTTREALEAKAEAAK----GKLAVDVGFWG 122 (442)
T ss_pred CEEECCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHC----CCCEEEEEEEC
T ss_conf 98957999856588999854314266778999659988999687789888653689999999722----56503343441
Q ss_pred EECCCCCHHHHHHHHHCCCEEEHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCC----------
Q ss_conf 5278999889987440687210221045510025654100688999999998739822202575555543----------
Q gi|254781012|r 76 YLTETTDPDDVEKGFTSQLVQAIKLYFAGSTTNSHHGIRNIDRVMPVLERMETIGMPLCIHGEILNQDID---------- 145 (349)
Q Consensus 76 ~lt~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~v~~~~~~~~~le~~~~~~~~i~~H~E~~~~~~~---------- 145 (349)
T Consensus 123 ~~~~~~-~~~l~~l~~~g-~~~~k~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~g~~~~~h~e~~~~~~~~~~~~~~~~~ 199 (442)
T TIGR03178 123 GLVPGN-LDDLRALAEAG-VVGFKAFLSPSG-VDEFPHVDDRTLYKGMREIARAGKLLAVHAESPAITSALGEEAPPQGG 199 (442)
T ss_pred CCCCCH-HHHHHHHHHCC-CEEEEEEEECCC-CCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCC
T ss_conf 445313-66665534337-617889961256-776556799999999999986698699955898999999999986289
Q ss_pred --------CHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCC----CCCEEEECCCCCCCHHHHHCCCCCC
Q ss_conf --------0014676545789999962069539970578589999987057----3320230231003978861378883
Q gi|254781012|r 146 --------IFDRELMFIDKILDPLRNKLPNLKIILEHITTSNGIDYVNNAT----NIAGSITVHHLIINRNAIFHDGLNP 213 (349)
Q Consensus 146 --------~~~~E~~~~~~~l~~~~a~~~~~~iHi~HiST~~sv~lir~ak----~vtaEVTPHHL~lt~~d~~~~~~~~ 213 (349)
T Consensus 200 ~~~~~~~~~rp~~~e~~av~~~~~~a~~~g~~~hi~Hiss~~~l~~i~~ak~~G~~vt~e~~p~~l~l~~~~~~~--~~~ 277 (442)
T TIGR03178 200 VSARAYLASRPVAAEVEAVARTLAFAKDTGCRVHVVHISSAEAVALIREAKQEGLDVTVETCPHYLTFTAEEVPD--GGT 277 (442)
T ss_pred CCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHCHHHHHC--CCC
T ss_conf 656661366888999999999999999729945412247488999999999859926899664255304676605--783
Q ss_pred CEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCC-C--CCCCCCCHHHHHHHHHHH-HHCCCCHHHHHH
Q ss_conf 113213469999999999999769941897138886531332154-5--775445436799999999-720699999999
Q gi|254781012|r 214 HYYCLPIPKREKHRLSLRKAALSGNPRFFLGTDSAPHWDSSKESS-C--GCAGIYTARNALNCLAQI-FEEENKLENLES 289 (349)
Q Consensus 214 ~~k~nPPlR~~~dr~aL~~ai~~G~i~d~I~TDHAPH~~eeK~~~-~--~~~g~~~~~~~~~~~~~~-~~~~~~L~~l~~ 289 (349)
T Consensus 278 ~~k~~pplr~~~~~~~l~~~l~~g~i-d~i~sDh~p~~~~~k~~~~~~~~~~g~~g~e~~l~~~~~~~~~~glsl~~av~ 356 (442)
T TIGR03178 278 VFKCAPPIRDRQNQERLWEALLAGDI-DFVVSDHSPCTPDLKRSGDFFKAWGGISGLQFTLPVMWDEARQRGLPLEDIAR 356 (442)
T ss_pred EEECCCCCCCHHHHHHHHHHHHCCCE-EEEEECCCCCCHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 35318533678889999987626954-89983899999789445765454578751888999999999856877999999
Q ss_pred HHHHCCHHHCCCCC-------CCCEEEEEECCCCEEECHHHCCCCCCEEECCCCEEECCEEEE
Q ss_conf 98243178818898-------885289994797178471122677771465797698338887
Q gi|254781012|r 290 FVSINGATWYGIPV-------NTRKISLKRREQPIIFDEKITTSTGSITIFNPIFPLYWEVML 345 (349)
Q Consensus 290 ~~s~npa~~~gl~~-------~~~~i~l~d~~~~~~v~~~~~~sk~~~tpF~~g~~l~w~V~~ 345 (349)
T Consensus 357 ~~s~nPA~~lGL~~kG~l~~G~dADlvi~Dp~~~~~v~~~~~~s~~~~sp~~-g~~~~g~v~~ 418 (442)
T TIGR03178 357 LMATNPAKRFGLAQKGRIAPGKDADFVFVDDDESYTLTKDMLYHRHKISPYE-GRTIGGRVRA 418 (442)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEECHHHCCCCCCCCCCC-CCEEEEEEEE
T ss_conf 9978799985989888768898455899939998898857770668857768-9789889999