HHsearch alignment for GI: 254781012 and conserved domain: TIGR03178

>TIGR03178 allantoinase allantoinase. This enzyme carries out the first step in the degradation of allantoin, a ring-opening hydrolysis. The seed members of this model are all in the vicinity of other genes involved in the processes of xanthine/urate/allantoin catabolism. Although not included in the seed, many eukaryotic homologs of this family are included above the trusted cutoff. Below the noise cutoff are related hydantoinases.
Probab=100.00  E-value=0  Score=431.35  Aligned_cols=332  Identities=14%  Similarity=0.127  Sum_probs=260.9

Q ss_pred             EEEECCCCEEEEECCC------HHHHHHHHHHHCCCCEEEEECC-CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEE
Q ss_conf             5586466423750881------7889874987418873999838-95148989899999999999838688469950134
Q gi|254781012|r    3 KISLRVPDDWHLHLRD------GEILKTVLRDTAKNFRRALVMP-NIDPPIITVDDACAYRQRILNALPPEYDFSPLMTI   75 (349)
Q Consensus         3 ~l~lp~~~D~HvH~Re------g~~~~~t~aa~aGG~TtV~~MP-NT~Ppi~t~e~~~~~~~r~~~~~~~~~~~~~~~~~   75 (349)
T Consensus        47 ~~V~PGfID~H~H~~~pg~~~~e~~~t~~~aa~~gGvTtv~~~~~~~~p~~~~~~~l~~~~~~~~----~~~~vd~~~~~  122 (442)
T TIGR03178        47 LVVFPGVVDTHVHINEPGRTEWEGFETGTRAAAAGGITTFIDMPLNSIPPTTTREALEAKAEAAK----GKLAVDVGFWG  122 (442)
T ss_pred             CEEECCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHC----CCCEEEEEEEC
T ss_conf             98957999856588999854314266778999659988999687789888653689999999722----56503343441


Q ss_pred             EECCCCCHHHHHHHHHCCCEEEHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCC----------
Q ss_conf             5278999889987440687210221045510025654100688999999998739822202575555543----------
Q gi|254781012|r   76 YLTETTDPDDVEKGFTSQLVQAIKLYFAGSTTNSHHGIRNIDRVMPVLERMETIGMPLCIHGEILNQDID----------  145 (349)
Q Consensus        76 ~lt~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~v~~~~~~~~~le~~~~~~~~i~~H~E~~~~~~~----------  145 (349)
T Consensus       123 ~~~~~~-~~~l~~l~~~g-~~~~k~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~g~~~~~h~e~~~~~~~~~~~~~~~~~  199 (442)
T TIGR03178       123 GLVPGN-LDDLRALAEAG-VVGFKAFLSPSG-VDEFPHVDDRTLYKGMREIARAGKLLAVHAESPAITSALGEEAPPQGG  199 (442)
T ss_pred             CCCCCH-HHHHHHHHHCC-CEEEEEEEECCC-CCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCC
T ss_conf             445313-66665534337-617889961256-776556799999999999986698699955898999999999986289


Q ss_pred             --------CHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCC----CCCEEEECCCCCCCHHHHHCCCCCC
Q ss_conf             --------0014676545789999962069539970578589999987057----3320230231003978861378883
Q gi|254781012|r  146 --------IFDRELMFIDKILDPLRNKLPNLKIILEHITTSNGIDYVNNAT----NIAGSITVHHLIINRNAIFHDGLNP  213 (349)
Q Consensus       146 --------~~~~E~~~~~~~l~~~~a~~~~~~iHi~HiST~~sv~lir~ak----~vtaEVTPHHL~lt~~d~~~~~~~~  213 (349)
T Consensus       200 ~~~~~~~~~rp~~~e~~av~~~~~~a~~~g~~~hi~Hiss~~~l~~i~~ak~~G~~vt~e~~p~~l~l~~~~~~~--~~~  277 (442)
T TIGR03178       200 VSARAYLASRPVAAEVEAVARTLAFAKDTGCRVHVVHISSAEAVALIREAKQEGLDVTVETCPHYLTFTAEEVPD--GGT  277 (442)
T ss_pred             CCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHCHHHHHC--CCC
T ss_conf             656661366888999999999999999729945412247488999999999859926899664255304676605--783


Q ss_pred             CEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCC-C--CCCCCCCHHHHHHHHHHH-HHCCCCHHHHHH
Q ss_conf             113213469999999999999769941897138886531332154-5--775445436799999999-720699999999
Q gi|254781012|r  214 HYYCLPIPKREKHRLSLRKAALSGNPRFFLGTDSAPHWDSSKESS-C--GCAGIYTARNALNCLAQI-FEEENKLENLES  289 (349)
Q Consensus       214 ~~k~nPPlR~~~dr~aL~~ai~~G~i~d~I~TDHAPH~~eeK~~~-~--~~~g~~~~~~~~~~~~~~-~~~~~~L~~l~~  289 (349)
T Consensus       278 ~~k~~pplr~~~~~~~l~~~l~~g~i-d~i~sDh~p~~~~~k~~~~~~~~~~g~~g~e~~l~~~~~~~~~~glsl~~av~  356 (442)
T TIGR03178       278 VFKCAPPIRDRQNQERLWEALLAGDI-DFVVSDHSPCTPDLKRSGDFFKAWGGISGLQFTLPVMWDEARQRGLPLEDIAR  356 (442)
T ss_pred             EEECCCCCCCHHHHHHHHHHHHCCCE-EEEEECCCCCCHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf             35318533678889999987626954-89983899999789445765454578751888999999999856877999999


Q ss_pred             HHHHCCHHHCCCCC-------CCCEEEEEECCCCEEECHHHCCCCCCEEECCCCEEECCEEEE
Q ss_conf             98243178818898-------885289994797178471122677771465797698338887
Q gi|254781012|r  290 FVSINGATWYGIPV-------NTRKISLKRREQPIIFDEKITTSTGSITIFNPIFPLYWEVML  345 (349)
Q Consensus       290 ~~s~npa~~~gl~~-------~~~~i~l~d~~~~~~v~~~~~~sk~~~tpF~~g~~l~w~V~~  345 (349)
T Consensus       357 ~~s~nPA~~lGL~~kG~l~~G~dADlvi~Dp~~~~~v~~~~~~s~~~~sp~~-g~~~~g~v~~  418 (442)
T TIGR03178       357 LMATNPAKRFGLAQKGRIAPGKDADFVFVDDDESYTLTKDMLYHRHKISPYE-GRTIGGRVRA  418 (442)
T ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEECHHHCCCCCCCCCCC-CCEEEEEEEE
T ss_conf             9978799985989888768898455899939998898857770668857768-9789889999