HHsearch alignment for GI: 254781012 and conserved domain: cd01292

>cd01292 metallo-dependent_hydrolases Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The family includes urease alpha, adenosine deaminase, phosphotriesterase dihydroorotases, allantoinases, hydantoinases, AMP-, adenine and cytosine deaminases, imidazolonepropionase, aryldialkylphosphatase, chlorohydrolases, formylmethanofuran dehydrogenases and others.
Probab=99.35  E-value=8.9e-11  Score=86.07  Aligned_cols=242  Identities=18%  Similarity=0.123  Sum_probs=127.7

Q ss_pred             CCEEEEECCC--------------------HHHHH----HHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf             6423750881--------------------78898----74987418873999838951489898999999999998386
Q gi|254781012|r    9 PDDWHLHLRD--------------------GEILK----TVLRDTAKNFRRALVMPNIDPPIITVDDACAYRQRILNALP   64 (349)
Q Consensus         9 ~~D~HvH~Re--------------------g~~~~----~t~aa~aGG~TtV~~MPNT~Ppi~t~e~~~~~~~r~~~~~~   64 (349)
T Consensus         1 fID~H~H~~~~~~~~~~~~~~~~~~~~~t~e~~~~~~~~~~~e~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~-   79 (275)
T cd01292           1 FIDTHVHLDGSALRGTRLNLELKEAEELSPEDLYEDTLRALEALLAGGVTTVVDMGSTPPPTTTKAAIEAVAEAARASA-   79 (275)
T ss_pred             CEECCCCHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHC-
T ss_conf             9606744788878607415870545059999999999999999997696299865135884666999999999972555-


Q ss_pred             CCCEEEEEEEEEECCC----CCHHHHHHHHH-CC--CEEEHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCEECCC
Q ss_conf             8846995013452789----99889987440-68--72102210455100256541006889999999987398222025
Q gi|254781012|r   65 PEYDFSPLMTIYLTET----TDPDDVEKGFT-SQ--LVQAIKLYFAGSTTNSHHGIRNIDRVMPVLERMETIGMPLCIHG  137 (349)
Q Consensus        65 ~~~~~~~~~~~~lt~~----~~~~~~~~~~~-~~--~~~~~k~~~~~~~~~~~~~v~~~~~~~~~le~~~~~~~~i~~H~  137 (349)
T Consensus        80 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~e~~~~~~~~a~~~~~~i~~H~  153 (275)
T cd01292          80 -GIRVVLGLGIPGVPAAVDEDAEALLLELLRRGLELGAVGLKLAGPYT-----ATGLSDESLRRVLEEARKLGLPVVIHA  153 (275)
T ss_pred             -CEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCC-----CCCCCHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             -86898016867777333210479999999972565674698866877-----889999999999999997699389973


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCH--HHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCCCCCCE
Q ss_conf             7555554300146765457899999620695399705785--89999987057332023023100397886137888311
Q gi|254781012|r  138 EILNQDIDIFDRELMFIDKILDPLRNKLPNLKIILEHITT--SNGIDYVNNATNIAGSITVHHLIINRNAIFHDGLNPHY  215 (349)
Q Consensus       138 E~~~~~~~~~~~E~~~~~~~l~~~~a~~~~~~iHi~HiST--~~sv~lir~ak~vtaEVTPHHL~lt~~d~~~~~~~~~~  215 (349)
T Consensus       154 ~e~~~~-------~~~---~~~l~~~~~l~~~~~~~H~~~~~~~~~~~l~~~-g~~v~~~P~sn~~l~----~~~~~---  215 (275)
T cd01292         154 GELPDP-------TRA---LEDLVALLRLGGRVVIGHVSHLDPELLELLKEA-GVSLEVCPLSNYLLG----RDGEG---  215 (275)
T ss_pred             CCCCCC-------CHH---HHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHC-CCEEEECCHHHHHHC----CCCCC---
T ss_conf             687544-------359---999997488899858887540799999999985-995998815677744----47679---


Q ss_pred             EECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
Q ss_conf             32134699999999999997699418971388865313321545775445436799999999720699999999982431
Q gi|254781012|r  216 YCLPIPKREKHRLSLRKAALSGNPRFFLGTDSAPHWDSSKESSCGCAGIYTARNALNCLAQIFEEENKLENLESFVSING  295 (349)
Q Consensus       216 k~nPPlR~~~dr~aL~~ai~~G~i~d~I~TDHAPH~~eeK~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~l~~~~s~np  295 (349)
T Consensus       216 --~~~---------~~~~~~~G-~~v~LgtD~~~~~~-----------~~~~~~~m~~~~~~~~~~~~~~~~l~~aT~n~  272 (275)
T cd01292         216 --AEA---------LRRLLELG-IRVTLGTDGPPHPL-----------GTDLLALLRLLLKVLRLGLSLEEALRLATINP  272 (275)
T ss_pred             --CCC---------HHHHHHCC-CEEEEECCCCCCCC-----------CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf             --877---------89999687-97998389998899-----------83899999999997564899999999983874


Q ss_pred             HHH
Q ss_conf             788
Q gi|254781012|r  296 ATW  298 (349)
Q Consensus       296 a~~  298 (349)
T Consensus       273 Ara  275 (275)
T cd01292         273 ARA  275 (275)
T ss_pred             HCC
T ss_conf             279