HHsearch alignment for GI: 254781012 and conserved domain: cd01294
>cd01294 DHOase Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in the pyrimidine biosynthesis. In contrast to the large polyfunctional CAD proteins of higher organisms, this group of DHOases is monofunctional and mainly dimeric.
Probab=100.00 E-value=0 Score=680.58 Aligned_cols=334 Identities=50% Similarity=0.887 Sum_probs=314.5
Q ss_pred EEECCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCH
Q ss_conf 58646642375088178898749874188739998389514898989999999999983868846995013452789998
Q gi|254781012|r 4 ISLRVPDDWHLHLRDGEILKTVLRDTAKNFRRALVMPNIDPPIITVDDACAYRQRILNALPPEYDFSPLMTIYLTETTDP 83 (349)
Q Consensus 4 l~lp~~~D~HvH~Reg~~~~~t~aa~aGG~TtV~~MPNT~Ppi~t~e~~~~~~~r~~~~~~~~~~~~~~~~~~lt~~~~~ 83 (349)
T Consensus 1 l~lPg~iD~HVHlReg~~~~~~~~a~a~G~t~v~~MPNT~Ppi~~~~~~~~y~~~i~~~~-~~~~~~~~~~~~lt~~~~~ 79 (335)
T cd01294 1 LTIPRPDDMHLHLRDGAMLKLVLPYTARGFSRAIVMPNLKPPVTTTADALAYRERILAAD-PGPNFTPLMTLYLTENTTP 79 (335)
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHC-CCCCEEEEEEEEECCCCCH
T ss_conf 908888661443789625888999983778699989999999899999999999999738-8983657888860589999
Q ss_pred HHHHHHHHCCCEEEHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 89987440687210221045510025654100688999999998739822202575555543001467654578999996
Q gi|254781012|r 84 DDVEKGFTSQLVQAIKLYFAGSTTNSHHGIRNIDRVMPVLERMETIGMPLCIHGEILNQDIDIFDRELMFIDKILDPLRN 163 (349)
Q Consensus 84 ~~~~~~~~~~~~~~~k~~~~~~~~~~~~~v~~~~~~~~~le~~~~~~~~i~~H~E~~~~~~~~~~~E~~~~~~~l~~~~a 163 (349)
T Consensus 80 ~el~~~~~~~~v~giK~y~~gattns~~Gv~~~~~~~~~~e~~~~~~~~l~~H~E~~~~~~~~~~~E~~~i~~~-~~l~~ 158 (335)
T cd01294 80 EELREAKKKGGIRGVKLYPAGATTNSQGGVTDLEKIYPVLEAMQKLGMPLLVHGEVPDFKIDVLDREAKFIPVL-EPLAQ 158 (335)
T ss_pred HHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHH-HHHHH
T ss_conf 99997665278554662146860046557655899999999998669967774765887566036788767878-99998
Q ss_pred HHCCCEEEEECCCHHHHHHHHHHCC-CCCEEEECCCCCCCHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCEEE
Q ss_conf 2069539970578589999987057-332023023100397886137888311321346999999999999976994189
Q gi|254781012|r 164 KLPNLKIILEHITTSNGIDYVNNAT-NIAGSITVHHLIINRNAIFHDGLNPHYYCLPIPKREKHRLSLRKAALSGNPRFF 242 (349)
Q Consensus 164 ~~~~~~iHi~HiST~~sv~lir~ak-~vtaEVTPHHL~lt~~d~~~~~~~~~~k~nPPlR~~~dr~aL~~ai~~G~i~d~ 242 (349)
T Consensus 159 ~~~~l~ihi~HIST~~~ve~ik~~~~~VtaEVTPHHL~lt~~d~~~~~~~~~~kcnPplR~~~Dr~AL~~al~~G~id~~ 238 (335)
T cd01294 159 RFPKLKIVLEHITTADAVEYVKSCNENVAATITPHHLLLTRDDLLGGGLNPHLYCKPVAKRPEDREALRKAATSGHPKFF 238 (335)
T ss_pred HCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEECCEEEEEHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHHHCCCCCEE
T ss_conf 68887699984385999999995899704887332157516787444858000329998998999999999974998489
Q ss_pred EECCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHCCCCCCCCEEEEEECCCCEEECHH
Q ss_conf 71388865313321545775445436799999999720699999999982431788188988852899947971784711
Q gi|254781012|r 243 LGTDSAPHWDSSKESSCGCAGIYTARNALNCLAQIFEEENKLENLESFVSINGATWYGIPVNTRKISLKRREQPIIFDEK 322 (349)
Q Consensus 243 I~TDHAPH~~eeK~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~l~~~~s~npa~~~gl~~~~~~i~l~d~~~~~~v~~~ 322 (349)
T Consensus 239 iaTDHAPH~~~eKe~~~~~AGi~~~~~al~~l~~~f~~~~~l~~l~~f~s~n~a~~~gl~~~~~~i~~~~--~~~~vp~~ 316 (335)
T cd01294 239 LGSDSAPHPKSNKESSCGCAGIFSAPIALPYLAEVFEEHNALDKLEAFASDNGPNFYGLPPNKKTITLVK--EPWKVPEK 316 (335)
T ss_pred EECCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE--CCCCCCCE
T ss_conf 8479999864552488999981578889999999998048499999998465798809998998699997--88056872
Q ss_pred HCCCCCCEEECCCCEEECC
Q ss_conf 2267777146579769833
Q gi|254781012|r 323 ITTSTGSITIFNPIFPLYW 341 (349)
Q Consensus 323 ~~~sk~~~tpF~~g~~l~w 341 (349)
T Consensus 317 ~~~~~~~~~P~~ag~~~~w 335 (335)
T cd01294 317 IPFGNNGVVPFRAGETLRW 335 (335)
T ss_pred EECCCCCEEECCCCCCCCC
T ss_conf 2149985786389987779