HHsearch alignment for GI: 254781012 and conserved domain: cd01297

>cd01297 D-aminoacylase D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics.
Probab=99.69  E-value=1.2e-14  Score=110.12  Aligned_cols=188  Identities=10%  Similarity=-0.027  Sum_probs=100.2

Q ss_pred             HHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHH---------HHHHHHHC
Q ss_conf             889999999987398222025755555430014676545789999962069539970578589---------99998705
Q gi|254781012|r  117 DRVMPVLERMETIGMPLCIHGEILNQDIDIFDRELMFIDKILDPLRNKLPNLKIILEHITTSN---------GIDYVNNA  187 (349)
Q Consensus       117 ~~~~~~le~~~~~~~~i~~H~E~~~~~~~~~~~E~~~~~~~l~~~~a~~~~~~iHi~HiST~~---------sv~lir~a  187 (349)
T Consensus       199 ~e~~~~~~~a~~~~~~~~~h~~~~~------~~~~~--~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~  270 (415)
T cd01297         199 AELVALARVAARYGGVYQTHVRYEG------DSILE--ALDELLRLGRETGRPVHISHLKSAGAPNWGKIDRLLALIEAA  270 (415)
T ss_pred             HHHHHHHHHHHHCCCEEEEECCCCC------CCHHH--HHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf             9999999999972985787306775------20678--999999999862997899987436731023477799999999


Q ss_pred             CCCCEEEECCCCCCCHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCH
Q ss_conf             73320230231003978861378883113213469999999999999769941897138886531332154577544543
Q gi|254781012|r  188 TNIAGSITVHHLIINRNAIFHDGLNPHYYCLPIPKREKHRLSLRKAALSGNPRFFLGTDSAPHWDSSKESSCGCAGIYTA  267 (349)
Q Consensus       188 k~vtaEVTPHHL~lt~~d~~~~~~~~~~k~nPPlR~~~dr~aL~~ai~~G~i~d~I~TDHAPH~~eeK~~~~~~~g~~~~  267 (349)
T Consensus       271 ~~~g~~v~~~~~~~------------------~~~~~~----~~~~~~~~~~-~~~~~D~~~~~~~~~-------~~~~~  320 (415)
T cd01297         271 RAEGLQVTADVYPY------------------GAGSED----DVRRIMAHPV-VMGGSDGGALGKPHP-------RSYGD  320 (415)
T ss_pred             HHCCCEEEECCCCC------------------CCCCHH----HHHHHHHCCC-CEEEECCCCCCCCCC-------CHHHH
T ss_conf             97498465231476------------------556527----8999971898-258705676777552-------01345


Q ss_pred             HHHHHHHHHHH-HCCCCHHHHHHHHHHCCHHHCCCC-------CCCCEEEEEECCCCEEECHHHCCCCCCEEECCCCEE-
Q ss_conf             67999999997-206999999999824317881889-------888528999479717847112267777146579769-
Q gi|254781012|r  268 RNALNCLAQIF-EEENKLENLESFVSINGATWYGIP-------VNTRKISLKRREQPIIFDEKITTSTGSITIFNPIFP-  338 (349)
Q Consensus       268 ~~~~~~~~~~~-~~~~~L~~l~~~~s~npa~~~gl~-------~~~~~i~l~d~~~~~~v~~~~~~sk~~~tpF~~g~~-  338 (349)
T Consensus       321 -~~~~l~~~~~~~~~l~~~~ai~~~T~n~A~~lgl~drGsL~~Gk~ADlVI~D~~~--~~~~~~~~~--~~~~~~-~~~~  394 (415)
T cd01297         321 -FTRVLGHYVRERKLLSLEEAVRKMTGLPARVFGLADRGRIAPGYRADIVVFDPDT--LADRATFTR--PNQPAE-GIEA  394 (415)
T ss_pred             -HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCC--CCCCCCCCC--CCCCCC-CEEE
T ss_conf             -5788877653305889999999996999998299998623899918889987421--246564236--678888-8389


Q ss_pred             --ECCEEEEECC
Q ss_conf             --8338887416
Q gi|254781012|r  339 --LYWEVMLHDN  348 (349)
Q Consensus       339 --l~w~V~~~~~  348 (349)
T Consensus       395 ~~~~g~~~~~~~  406 (415)
T cd01297         395 VLVNGVPVVRDG  406 (415)
T ss_pred             EEECCEEEEECC
T ss_conf             999999999999