HHsearch alignment for GI: 254781012 and conserved domain: cd01299
>cd01299 Met_dep_hydrolase_A Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.25 E-value=7.5e-10 Score=80.37 Aligned_cols=165 Identities=13% Similarity=0.057 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEE--EEECCCHHHHHHHHHHCCCCCE
Q ss_conf 06889999999987398222025755555430014676545789999962069539--9705785899999870573320
Q gi|254781012|r 115 NIDRVMPVLERMETIGMPLCIHGEILNQDIDIFDRELMFIDKILDPLRNKLPNLKI--ILEHITTSNGIDYVNNATNIAG 192 (349)
Q Consensus 115 ~~~~~~~~le~~~~~~~~i~~H~E~~~~~~~~~~~E~~~~~~~l~~~~a~~~~~~i--Hi~HiST~~sv~lir~ak~vta 192 (349)
T Consensus 158 ~~~~~~~~~~~a~~~g~~v~~H~~~~---------~~~--------~~~~~~G~~~i~H~~~~~-~~~~~~~~~~g---~ 216 (342)
T cd01299 158 SEEELRAIVDEAHKAGLYVAAHAYGA---------EAI--------RRAIRAGVDTIEHGFLID-DETIELMKEKG---I 216 (342)
T ss_pred CHHHHHHHHHHHHHHCCCEEEECCCH---------HHH--------HHHHHHCCCHHHHHCCCC-HHHHHHHHHCC---C
T ss_conf 99999999999998199467741663---------899--------999991996267650488-99999999779---1
Q ss_pred EEECCCCCCCHHHHH--CCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCHHHH
Q ss_conf 230231003978861--378883113213469999999999999769941897138886531332154577544543679
Q gi|254781012|r 193 SITVHHLIINRNAIF--HDGLNPHYYCLPIPKREKHRLSLRKAALSGNPRFFLGTDSAPHWDSSKESSCGCAGIYTARNA 270 (349)
Q Consensus 193 EVTPHHL~lt~~d~~--~~~~~~~~k~nPPlR~~~dr~aL~~ai~~G~i~d~I~TDHAPH~~eeK~~~~~~~g~~~~~~~ 270 (349)
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aGv~-v~lgtD~~~~~~~~-------------~~~ 282 (342)
T cd01299 217 FLVPTLATYEALAAEGAAPGLPADSAEKVALVLEAGRDALRRAHKAGVK-IAFGTDAGFPVPPH-------------GWN 282 (342)
T ss_pred EEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCE-EEEECCCCCCCCCH-------------HHH
T ss_conf 8945647878877502445776678888887666457999999977994-99867888887726-------------799
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHCCHHHCCCC--------CCCCEEEEEECC
Q ss_conf 99999997206999999999824317881889--------888528999479
Q gi|254781012|r 271 LNCLAQIFEEENKLENLESFVSINGATWYGIP--------VNTRKISLKRRE 314 (349)
Q Consensus 271 ~~~~~~~~~~~~~L~~l~~~~s~npa~~~gl~--------~~~~~i~l~d~~ 314 (349)
T Consensus 283 ~~~~~~~~~~gl~~~eal~~aT~n~A~~lgl~~~~GsL~~Gk~ADlVv~D~d 334 (342)
T cd01299 283 ARELELLVKAGGTPAEALRAATANAAELLGLSDELGVIEAGKLADLLVVDGD 334 (342)
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEECCC
T ss_conf 9999999983999999999999999999689999770698985448998898