HHsearch alignment for GI: 254781012 and conserved domain: cd01306
>cd01306 PhnM PhnM is believed to be a subunit of the membrane associated C-P lyase complex. C-P lyase is thought to catalyze the direct cleavage of inactivated C-P bonds to yield inorganic phosphate and the corresponding hydrocarbons. It is responsible for cleavage of alkylphosphonates, which are utilized as sole phosphorus sources by many bacteria.
Probab=98.39 E-value=4.7e-05 Score=50.70 Aligned_cols=75 Identities=21% Similarity=0.118 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHCCCC--
Q ss_conf 999999999976994189713888653133215457754454367999999997206999999999824317881889--
Q gi|254781012|r 225 KHRLSLRKAALSGNPRFFLGTDSAPHWDSSKESSCGCAGIYTARNALNCLAQIFEEENKLENLESFVSINGATWYGIP-- 302 (349)
Q Consensus 225 ~dr~aL~~ai~~G~i~d~I~TDHAPH~~eeK~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~l~~~~s~npa~~~gl~-- 302 (349)
T Consensus 234 sGNvsA~elv~~gl~-diL~SDY~p~SLL--------------~Aaf~-L--~~~~~~~L~~A~~lVS~nPA~a~gL~DR 295 (325)
T cd01306 234 SGNVSARELAAHGLL-DILSSDYVPASLL--------------HAAFR-L--ADLGGWSLPEAVALVSANPARAVGLTDR 295 (325)
T ss_pred CCCHHHHHHHHCCCC-CEECCCCCCHHHH--------------HHHHH-H--HHCCCCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf 886239999977897-6871078867899--------------99999-9--8737999999999985659988699656
Q ss_pred -----CCCCEEEEEECCCCE
Q ss_conf -----888528999479717
Q gi|254781012|r 303 -----VNTRKISLKRREQPI 317 (349)
Q Consensus 303 -----~~~~~i~l~d~~~~~ 317 (349)
T Consensus 296 G~I~~G~RADLv~v~~~~~~ 315 (325)
T cd01306 296 GSIAPGKRADLILVDDMDGV 315 (325)
T ss_pred CCCCCCCCCCEEEEECCCCC
T ss_conf 66478862688999638997