HHsearch alignment for GI: 254781012 and conserved domain: cd01315
>cd01315 L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology). But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.
Probab=100.00 E-value=0 Score=409.19 Aligned_cols=333 Identities=15% Similarity=0.118 Sum_probs=258.0
Q ss_pred CEEEECCCCEEEEECCC------HHHHHHHHHHHCCCCEEEEECC-CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEE
Q ss_conf 65586466423750881------7889874987418873999838-9514898989999999999983868846995013
Q gi|254781012|r 2 KKISLRVPDDWHLHLRD------GEILKTVLRDTAKNFRRALVMP-NIDPPIITVDDACAYRQRILNALPPEYDFSPLMT 74 (349)
Q Consensus 2 ~~l~lp~~~D~HvH~Re------g~~~~~t~aa~aGG~TtV~~MP-NT~Ppi~t~e~~~~~~~r~~~~~~~~~~~~~~~~ 74 (349)
T Consensus 47 G~~V~PGfID~H~H~~~pg~~~~e~~~~~~~aa~~gGvTtv~~~p~~~~p~~~~~~~~~~~~~~~~~----~~~~d~~~~ 122 (447)
T cd01315 47 GLVVMPGLIDTHVHINEPGRTEWEGFETGTKAAAAGGITTIIDMPLNSIPPTTTVENLEAKLEAAQG----KLHVDVGFW 122 (447)
T ss_pred CCEECCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHC----CCCCCEEEE
T ss_conf 9999038687775889887442040666799998389338996767889875649999999998642----466210145
Q ss_pred EEECCCCCHHHHHHHHHCCCEEEHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCC--------
Q ss_conf 452789998899874406872102210455100256541006889999999987398222025755555430--------
Q gi|254781012|r 75 IYLTETTDPDDVEKGFTSQLVQAIKLYFAGSTTNSHHGIRNIDRVMPVLERMETIGMPLCIHGEILNQDIDI-------- 146 (349)
Q Consensus 75 ~~lt~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~v~~~~~~~~~le~~~~~~~~i~~H~E~~~~~~~~-------- 146 (349)
T Consensus 123 ~~~~~~~-~~~l~~~~~~g-~~g~k~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~h~e~~~~~~~~~~~~~~~~ 199 (447)
T cd01315 123 GGLVPGN-LDQLRPLDEAG-VVGFKCFLCPSG-VDEFPAVDDEQLEEAMKELAKTGSVLAVHAENPEITEALQEQAKAKG 199 (447)
T ss_pred ECCCCCC-HHHHHHHHHCC-CEEEEEEECCCC-CCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCC
T ss_conf 1224640-67689988628-627888831565-77655589999999999998559879996588699999898998638
Q ss_pred ----------HHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCC----CCCEEEECCCCCCCHHHHHCCCCC
Q ss_conf ----------014676545789999962069539970578589999987057----332023023100397886137888
Q gi|254781012|r 147 ----------FDRELMFIDKILDPLRNKLPNLKIILEHITTSNGIDYVNNAT----NIAGSITVHHLIINRNAIFHDGLN 212 (349)
Q Consensus 147 ----------~~~E~~~~~~~l~~~~a~~~~~~iHi~HiST~~sv~lir~ak----~vtaEVTPHHL~lt~~d~~~~~~~ 212 (349)
T Consensus 200 ~~~~~~~~~~~p~~~e~~ai~~~~~~a~~~g~~~~i~H~s~~~~~~~i~~a~~~G~~vt~e~~ph~l~l~~~~~~~--~~ 277 (447)
T cd01315 200 KRDYRDYLASRPVFTEVEAIQRILLLAKETGCRLHIVHLSSAEAVPLIREARAEGVDVTVETCPHYLTFTAEDVPD--GG 277 (447)
T ss_pred CCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHCCCHHHHHH--CC
T ss_conf 8646664144873799999999999988629936986237777899999999749965578622222089989850--49
Q ss_pred CCEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCC-----CCCCCCHHHHHHHHHHH--HHCCCCHH
Q ss_conf 311321346999999999999976994189713888653133215457-----75445436799999999--72069999
Q gi|254781012|r 213 PHYYCLPIPKREKHRLSLRKAALSGNPRFFLGTDSAPHWDSSKESSCG-----CAGIYTARNALNCLAQI--FEEENKLE 285 (349)
Q Consensus 213 ~~~k~nPPlR~~~dr~aL~~ai~~G~i~d~I~TDHAPH~~eeK~~~~~-----~~g~~~~~~~~~~~~~~--~~~~~~L~ 285 (349)
T Consensus 278 ~~~k~~pplr~~~~~~~l~~~l~~g~i-~~i~sDh~p~~~~~k~~~~~~~~~~~~g~~g~~~~l~~~~~~~~~~~~l~le 356 (447)
T cd01315 278 TEFKCAPPIRDAANQEQLWEALENGDI-DMVVSDHSPCTPELKLLGKGDFFKAWGGISGLQLGLPVMLTEAVNKRGLSLE 356 (447)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCE-EEEEECCCCCCHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHH
T ss_conf 631017211544559999998744981-7999489999988961356866551378741777899999999982999999
Q ss_pred HHHHHHHHCCHHHCCCCCC--------CCEEEEEECCCCEEECHHHCCCCCCEEECCCCEEECCEEEE
Q ss_conf 9999982431788188988--------85289994797178471122677771465797698338887
Q gi|254781012|r 286 NLESFVSINGATWYGIPVN--------TRKISLKRREQPIIFDEKITTSTGSITIFNPIFPLYWEVML 345 (349)
Q Consensus 286 ~l~~~~s~npa~~~gl~~~--------~~~i~l~d~~~~~~v~~~~~~sk~~~tpF~~g~~l~w~V~~ 345 (349)
T Consensus 357 ~~v~~~T~nPA~~lgl~~~kG~I~~G~dADlvi~D~~~~~~v~~~~~~s~~~~sp~~-G~~~~g~v~~ 423 (447)
T cd01315 357 DIARLMCENPAKLFGLSHQKGRIAVGYDADFVVWDPEEEFTVDAEDLYYKNKISPYV-GRTLKGRVHA 423 (447)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEECHHHCCCCCCCCCCC-CCEEEEEEEE
T ss_conf 999999788999849888877607898467899919998898868843758978837-9888778999