HHsearch alignment for GI: 254781012 and conserved domain: cd01315

>cd01315 L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology). But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.
Probab=100.00  E-value=0  Score=409.19  Aligned_cols=333  Identities=15%  Similarity=0.118  Sum_probs=258.0

Q ss_pred             CEEEECCCCEEEEECCC------HHHHHHHHHHHCCCCEEEEECC-CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEE
Q ss_conf             65586466423750881------7889874987418873999838-9514898989999999999983868846995013
Q gi|254781012|r    2 KKISLRVPDDWHLHLRD------GEILKTVLRDTAKNFRRALVMP-NIDPPIITVDDACAYRQRILNALPPEYDFSPLMT   74 (349)
Q Consensus         2 ~~l~lp~~~D~HvH~Re------g~~~~~t~aa~aGG~TtV~~MP-NT~Ppi~t~e~~~~~~~r~~~~~~~~~~~~~~~~   74 (349)
T Consensus        47 G~~V~PGfID~H~H~~~pg~~~~e~~~~~~~aa~~gGvTtv~~~p~~~~p~~~~~~~~~~~~~~~~~----~~~~d~~~~  122 (447)
T cd01315          47 GLVVMPGLIDTHVHINEPGRTEWEGFETGTKAAAAGGITTIIDMPLNSIPPTTTVENLEAKLEAAQG----KLHVDVGFW  122 (447)
T ss_pred             CCEECCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHC----CCCCCEEEE
T ss_conf             9999038687775889887442040666799998389338996767889875649999999998642----466210145


Q ss_pred             EEECCCCCHHHHHHHHHCCCEEEHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCC--------
Q ss_conf             452789998899874406872102210455100256541006889999999987398222025755555430--------
Q gi|254781012|r   75 IYLTETTDPDDVEKGFTSQLVQAIKLYFAGSTTNSHHGIRNIDRVMPVLERMETIGMPLCIHGEILNQDIDI--------  146 (349)
Q Consensus        75 ~~lt~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~v~~~~~~~~~le~~~~~~~~i~~H~E~~~~~~~~--------  146 (349)
T Consensus       123 ~~~~~~~-~~~l~~~~~~g-~~g~k~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~h~e~~~~~~~~~~~~~~~~  199 (447)
T cd01315         123 GGLVPGN-LDQLRPLDEAG-VVGFKCFLCPSG-VDEFPAVDDEQLEEAMKELAKTGSVLAVHAENPEITEALQEQAKAKG  199 (447)
T ss_pred             ECCCCCC-HHHHHHHHHCC-CEEEEEEECCCC-CCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCC
T ss_conf             1224640-67689988628-627888831565-77655589999999999998559879996588699999898998638


Q ss_pred             ----------HHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCC----CCCEEEECCCCCCCHHHHHCCCCC
Q ss_conf             ----------014676545789999962069539970578589999987057----332023023100397886137888
Q gi|254781012|r  147 ----------FDRELMFIDKILDPLRNKLPNLKIILEHITTSNGIDYVNNAT----NIAGSITVHHLIINRNAIFHDGLN  212 (349)
Q Consensus       147 ----------~~~E~~~~~~~l~~~~a~~~~~~iHi~HiST~~sv~lir~ak----~vtaEVTPHHL~lt~~d~~~~~~~  212 (349)
T Consensus       200 ~~~~~~~~~~~p~~~e~~ai~~~~~~a~~~g~~~~i~H~s~~~~~~~i~~a~~~G~~vt~e~~ph~l~l~~~~~~~--~~  277 (447)
T cd01315         200 KRDYRDYLASRPVFTEVEAIQRILLLAKETGCRLHIVHLSSAEAVPLIREARAEGVDVTVETCPHYLTFTAEDVPD--GG  277 (447)
T ss_pred             CCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHCCCHHHHHH--CC
T ss_conf             8646664144873799999999999988629936986237777899999999749965578622222089989850--49


Q ss_pred             CCEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCC-----CCCCCCHHHHHHHHHHH--HHCCCCHH
Q ss_conf             311321346999999999999976994189713888653133215457-----75445436799999999--72069999
Q gi|254781012|r  213 PHYYCLPIPKREKHRLSLRKAALSGNPRFFLGTDSAPHWDSSKESSCG-----CAGIYTARNALNCLAQI--FEEENKLE  285 (349)
Q Consensus       213 ~~~k~nPPlR~~~dr~aL~~ai~~G~i~d~I~TDHAPH~~eeK~~~~~-----~~g~~~~~~~~~~~~~~--~~~~~~L~  285 (349)
T Consensus       278 ~~~k~~pplr~~~~~~~l~~~l~~g~i-~~i~sDh~p~~~~~k~~~~~~~~~~~~g~~g~~~~l~~~~~~~~~~~~l~le  356 (447)
T cd01315         278 TEFKCAPPIRDAANQEQLWEALENGDI-DMVVSDHSPCTPELKLLGKGDFFKAWGGISGLQLGLPVMLTEAVNKRGLSLE  356 (447)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHCCCE-EEEEECCCCCCHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHH
T ss_conf             631017211544559999998744981-7999489999988961356866551378741777899999999982999999


Q ss_pred             HHHHHHHHCCHHHCCCCCC--------CCEEEEEECCCCEEECHHHCCCCCCEEECCCCEEECCEEEE
Q ss_conf             9999982431788188988--------85289994797178471122677771465797698338887
Q gi|254781012|r  286 NLESFVSINGATWYGIPVN--------TRKISLKRREQPIIFDEKITTSTGSITIFNPIFPLYWEVML  345 (349)
Q Consensus       286 ~l~~~~s~npa~~~gl~~~--------~~~i~l~d~~~~~~v~~~~~~sk~~~tpF~~g~~l~w~V~~  345 (349)
T Consensus       357 ~~v~~~T~nPA~~lgl~~~kG~I~~G~dADlvi~D~~~~~~v~~~~~~s~~~~sp~~-G~~~~g~v~~  423 (447)
T cd01315         357 DIARLMCENPAKLFGLSHQKGRIAVGYDADFVVWDPEEEFTVDAEDLYYKNKISPYV-GRTLKGRVHA  423 (447)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEECHHHCCCCCCCCCCC-CCEEEEEEEE
T ss_conf             999999788999849888877607898467899919998898868843758978837-9888778999