PSIBLAST alignment of GI: 254781012 and protein with PDB id: 1gkp

>gi|21730171|pdb|1GKP|A Chain A, D-Hydantoinase (Dihydropyrimidinase) From Thermus Sp. In Space Group C2221 Length = 458
>gi|21730172|pdb|1GKP|B Chain B, D-Hydantoinase (Dihydropyrimidinase) From Thermus Sp. In Space Group C2221 Length = 458
 Score = 97.1 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 42/363 (11%), Positives = 88/363 (24%), Gaps = 58/363 (15%)

Query: 5   SLRVPDDWHLHLRDGEILK--------TVLRDTAKNFRRALVM--P--NIDPPIITVDDA 52
                 D H+H+    +                       + M  P  N        DDA
Sbjct: 50  VFPGFIDPHVHIYLPFMATFAKDTHETGSKAALMGGTTTYIEMCCPSRN--------DDA 101

Query: 53  CAYRQRILNALPPEYDFSPLMTIYLTETTDPDDVEKGFTSQLVQAIKLYFAGSTTNSHHG 112
               Q   +             + +++    D+  +G   ++V      F    +  +  
Sbjct: 102 LEGYQLWKSKAEGNSYCDYTFHMAVSK---FDEKTEGQLREIVADGISSFXIFLSYKNFF 158

Query: 113 IRNIDRVMPVLERMETIGMPLCIHGEI------------------LNQDIDIFDRELMFI 154
             +   +   L   + +G+ +  H E                              +   
Sbjct: 159 GVDDGEMYQTLRLAKELGVIVTAHCENAELVGRLQQKLLSEGKTGPEWHEPSRPEAVEAE 218

Query: 155 DKILDPLRNKLPNLKIILEHITTS----NGIDYVNNATNIAGS-ITVHHLIINRNAIFHD 209
                    +       + H++        +        I    +  H L+    A    
Sbjct: 219 GTARFATFLETTGATGYVVHLSCKPALDAAMAAKARGVPIYIESVIPHFLLDKTYAERGG 278

Query: 210 GLNPHYYCLPIPKREKHRLSLRKAALSGNPRFFLGTDSAPHWDSSKESSCGCAGIYTARN 269
                Y   P  + ++++  L  A   G     +GTD  P     K    G        N
Sbjct: 279 VEAMKYIMSPPLRDKRNQKVLWDALAQGFIDT-VGTDHCPFDTEQKLL--GKEAFTAIPN 335

Query: 270 ALN-------CLAQIFEEENKLE--NLESFVSINGATWYGIPVNTRKISLKRREQPIIFD 320
            +         L        +L+        S   A  +G+      I++      +++D
Sbjct: 336 GIPAIEDRVNLLYTYGVSRGRLDIHRFVDAASTKAAKLFGLFPRKGTIAVGSDADLVVYD 395

Query: 321 EKI 323
            + 
Sbjct: 396 PQY 398