PSIBLAST alignment of GI: 254781012 and protein with PDB id: 1gkp
>gi|21730171|pdb|1GKP|A Chain A, D-Hydantoinase (Dihydropyrimidinase) From Thermus Sp. In Space Group C2221 Length = 458
>gi|21730172|pdb|1GKP|B Chain B, D-Hydantoinase (Dihydropyrimidinase) From Thermus Sp. In Space Group C2221 Length = 458
Score = 97.1 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 42/363 (11%), Positives = 88/363 (24%), Gaps = 58/363 (15%)
Query: 5 SLRVPDDWHLHLRDGEILK--------TVLRDTAKNFRRALVM--P--NIDPPIITVDDA 52
D H+H+ + + M P N DDA
Sbjct: 50 VFPGFIDPHVHIYLPFMATFAKDTHETGSKAALMGGTTTYIEMCCPSRN--------DDA 101
Query: 53 CAYRQRILNALPPEYDFSPLMTIYLTETTDPDDVEKGFTSQLVQAIKLYFAGSTTNSHHG 112
Q + + +++ D+ +G ++V F + +
Sbjct: 102 LEGYQLWKSKAEGNSYCDYTFHMAVSK---FDEKTEGQLREIVADGISSFXIFLSYKNFF 158
Query: 113 IRNIDRVMPVLERMETIGMPLCIHGEI------------------LNQDIDIFDRELMFI 154
+ + L + +G+ + H E +
Sbjct: 159 GVDDGEMYQTLRLAKELGVIVTAHCENAELVGRLQQKLLSEGKTGPEWHEPSRPEAVEAE 218
Query: 155 DKILDPLRNKLPNLKIILEHITTS----NGIDYVNNATNIAGS-ITVHHLIINRNAIFHD 209
+ + H++ + I + H L+ A
Sbjct: 219 GTARFATFLETTGATGYVVHLSCKPALDAAMAAKARGVPIYIESVIPHFLLDKTYAERGG 278
Query: 210 GLNPHYYCLPIPKREKHRLSLRKAALSGNPRFFLGTDSAPHWDSSKESSCGCAGIYTARN 269
Y P + ++++ L A G +GTD P K G N
Sbjct: 279 VEAMKYIMSPPLRDKRNQKVLWDALAQGFIDT-VGTDHCPFDTEQKLL--GKEAFTAIPN 335
Query: 270 ALN-------CLAQIFEEENKLE--NLESFVSINGATWYGIPVNTRKISLKRREQPIIFD 320
+ L +L+ S A +G+ I++ +++D
Sbjct: 336 GIPAIEDRVNLLYTYGVSRGRLDIHRFVDAASTKAAKLFGLFPRKGTIAVGSDADLVVYD 395
Query: 321 EKI 323
+
Sbjct: 396 PQY 398