RPS-BLAST 2.2.22 [Sep-27-2009]

Database: mmdb70 
           33,805 sequences; 4,956,049 total letters

Searching..................................................done

Query= gi|254781014|ref|YP_003065427.1| hypothetical protein
CLIBASIA_04580 [Candidatus Liberibacter asiaticus str. psy62]
         (116 letters)



>2h8z_A Xenobiotic reductase A; beta-alpha barrel, oxidoreductase;
          HET: FMN 8CM; 1.42A {Pseudomonas putida} PDB: 2h90_A*
          2h8x_A* (A:1-104,A:149-359)
          Length = 315

 Score = 26.3 bits (57), Expect = 1.4
 Identities = 2/47 (4%), Positives = 10/47 (21%), Gaps = 3/47 (6%)

Query: 38 ITDFMTATSGTVGYASNLCNAKPEICLLWKKIMRNVKRHTLNGAKIV 84
          + +                         +  +++ +K     G+   
Sbjct: 53 VVEATAVAPEGRITPGCAGIWSDAHAQAFVPVVQAIKA---AGSVPG 96


>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-;
           fatty acid synthase, acyl-carrier-protein, beta-ketoacyl
           reductase, beta-ketoacyl synthase, dehydratase; 4.00A
           {Saccharomyces cerevisiae} (A:1221-1330,A:1541-1688)
          Length = 258

 Score = 24.8 bits (54), Expect = 3.7
 Identities = 6/18 (33%), Positives = 7/18 (38%), Gaps = 3/18 (16%)

Query: 95  NERESVAIHSKNEYPPPL 112
             RE    HS  +Y  P 
Sbjct: 9   TAREH---HSSVKYASPN 23


  Database: mmdb70
    Posted date:  Jun 20, 2010  3:12 AM
  Number of letters in database: 4,956,049
  Number of sequences in database:  33,805
  
Lambda     K      H
   0.319    0.133    0.408 

Gapped
Lambda     K      H
   0.267   0.0606    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33805
Number of Hits to DB: 859,899
Number of extensions: 30771
Number of successful extensions: 46
Number of sequences better than 10.0: 1
Number of HSP's gapped: 46
Number of HSP's successfully gapped: 3
Length of query: 116
Length of database: 4,956,049
Length adjustment: 69
Effective length of query: 47
Effective length of database: 2,623,504
Effective search space: 123304688
Effective search space used: 123304688
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.3 bits)