HHsearch alignment for GI: 254781016 and conserved domain: COG0083
>COG0083 ThrB Homoserine kinase [Amino acid transport and metabolism].
Probab=99.70 E-value=2.6e-14 Score=120.44 Aligned_cols=252 Identities=20% Similarity=0.156 Sum_probs=170.8
Q ss_pred HCCCCCCCEEEEECCCCEEEEEEECCCCCCEEEECCE---ECCCCCH--HHHHHHHHHHHHHHHCCCEEEEEEECCCCCC
Q ss_conf 1757898434681278107999971788857998787---2566520--6899999974216761943999985023321
Q gi|254781016|r 45 LNLPLNNSLSLSLGHLGTITHITVIDSDADCIILNGQ---KISSQSS--FFKKTTQFCDLFRQFSKVYFLIETSNNIPTK 119 (355)
Q Consensus 45 l~lP~n~SiS~TL~~~~T~T~v~~~~~~~d~~~lnG~---~~~~~~~--~~~ri~~~l~~~r~~~~~~~~I~S~N~fPta 119 (355)
T Consensus 14 NlGpGFD~lGlAl~~~~~~~v~~~~~--~~~i~~~g~~~~~iP~~~~n~~~~~~~~~~~~~~~~~--~~~i~i~k~IP~~ 89 (299)
T COG0083 14 NLGPGFDVLGLALDLYNDVVVVEVVD--KFEIEVEGEGADKIPLDPENLVYQAALKFLEALGIEA--GVKIRIEKGIPLG 89 (299)
T ss_pred CCCCCCCCEEEECCCCCCEEEEEECC--CEEEEEECCCCCCCCCCCCEEHHHHHHHHHHHHCCCC--CEEEEEECCCCCC
T ss_conf 46777000012014557279997047--3799983465667999830009999999999829986--5799997699877
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC---CCHHHHCCCCHHCCCCCCCCCCCEEEEECCCCCC-CCE
Q ss_conf 101232247999999999981889998899988652135---3034310562002578987654413101566686-421
Q gi|254781016|r 120 AGLASSASGFAALTLALFRIYSIPEKSESLSRVARLGSG---SACRSFYRGFCEWICGTDQNGMDSFAVPFNNQWP-DLR 195 (355)
Q Consensus 120 aGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlGSG---SA~RSi~GG~v~W~~g~~~~~sds~a~~~~~~~~-dl~ 195 (355)
T Consensus 90 rGLGSSaAsiVAal~aan~l~~~~L~~~~ll~~a~~~EgHpDNVapa~lGG~~l~~~---~~~~~~~~v~----~~~~~~ 162 (299)
T COG0083 90 RGLGSSAASIVAALAAANELAGLPLSKEELLQLALEIEGHPDNVAPAVLGGLVLVEE---ESGIISVKVP----FPSDLK 162 (299)
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCEEEEEE---CCCCEEEECC----CCCCEE
T ss_conf 787589999999999999984599989999999997558971077776078799861---5873479715----876468
Q ss_pred EEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 58999728766752105679887618568999973055099999999809999999999999998999870389956865
Q gi|254781016|r 196 IGLLKIIDREKKIGSREAMEITRHHSPFFTQWTQQISTDLAHIKQAIIDQDFIKLGEVAEKNALKMHATMIAASPPLLYW 275 (355)
Q Consensus 196 ~~i~iv~~~~K~vsSt~gm~~~v~tSp~y~~r~~~~~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~~~s~P~~~Y~ 275 (355)
T Consensus 163 ~v~~iP~~e----~sT~~aR~vLP~~~~~~da-V~n~s~~a~lv~al~~~~-~~l~~~~~~D--~ihepyR~~L------ 228 (299)
T COG0083 163 LVVVIPNFE----VSTAEARKVLPKSYSRKDA-VFNLSRAALLVAALLEGD-PELLRAMMKD--VIHEPYRAKL------ 228 (299)
T ss_pred EEEEECCCC----CCHHHHHHHCCCCCCHHHH-HHHHHHHHHHHHHHHCCC-HHHHHHHHCC--CCCHHHHHHH------
T ss_conf 999908965----6579999746566888999-999999999999997699-9999987036--0104666532------
Q ss_pred CHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECHHHHHHHHHHHHH
Q ss_conf 7889999999999742896199997779817999558989999999763
Q gi|254781016|r 276 QKETIQGMERVWDARQQSIPIYFTLDAGPNLKLLFTHKIEETIKQFFPE 324 (355)
Q Consensus 276 ~~~t~~ii~~v~~~R~~g~~v~fT~DAGPNv~il~~~~~~~~i~~~l~~ 324 (355)
T Consensus 229 ~P~~~~v~~---~a~~~gA~g~~lSGAGPTi~al~~~~~~e~~~~~~~~ 274 (299)
T COG0083 229 VPGYAEVRE---AALEAGALGATLSGAGPTVFALADESDAEKAAALLEE 274 (299)
T ss_pred CCCHHHHHH---HHHHCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHH
T ss_conf 701899999---9864796599996478707998454206679999999