HHsearch alignment for GI: 254781016 and conserved domain: COG2605
>COG2605 Predicted kinase related to galactokinase and mevalonate kinase [General function prediction only].
Probab=98.61 E-value=6.6e-05 Score=54.70 Aligned_cols=220 Identities=15% Similarity=0.108 Sum_probs=144.3
Q ss_pred EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC--------CC--CCHHHHCCCCHHCCCCCC
Q ss_conf 39999850233211012322479999999999818899988999886521--------35--303431056200257898
Q gi|254781016|r 107 YFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARLG--------SG--SACRSFYRGFCEWICGTD 176 (355)
Q Consensus 107 ~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlG--------SG--SA~RSi~GG~v~W~~g~~ 176 (355)
T Consensus 89 ~~el~~~~D~P~GSGLGSSSa~vvaLl~a~~~~kg~~~~~~~LA~eAy~IER~~l~~~gG~QDqYaaA~GGFnfMEf~~- 167 (333)
T COG2605 89 PIELHTQSDAPPGSGLGSSSAFVVALLNALHAWKGESLGPYELAREAYEIEREDLKIVGGKQDQYAAAFGGFNFMEFRG- 167 (333)
T ss_pred CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEECC-
T ss_conf 4699984378999987734799999999999985787898999999999889985454666237899847921799748-
Q ss_pred CCCC-CEEEEECCCC-CCCCEEEEEEECCCCCCCCCCHHHHHHHHHCHHH----HHHHHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf 7654-4131015666-8642158999728766752105679887618568----99997305509999999980999999
Q gi|254781016|r 177 QNGM-DSFAVPFNNQ-WPDLRIGLLKIIDREKKIGSREAMEITRHHSPFF----TQWTQQISTDLAHIKQAIIDQDFIKL 250 (355)
Q Consensus 177 ~~~s-ds~a~~~~~~-~~dl~~~i~iv~~~~K~vsSt~gm~~~v~tSp~y----~~r~~~~~~~~~~~~~ai~~~Df~~l 250 (355)
T Consensus 168 -~~~V~v~pL~i~~e~~~Ele~~~lL~yTGi~R~Ss~V~~dQ~~~-~~~~~~~~~e~~~~mk~~A~~~~~al~~nd~~~f 245 (333)
T COG2605 168 -NGEVVVNPLRINRERTAELEARLLLYYTGITRQSSEVIEDQVRN-VVDGDEETLEALHEMKALAYEMKDALVRNDIPEF 245 (333)
T ss_pred -CCCEEEEECCCCHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf -98389800334466899987406998816402255889999987-6315188999999999999999999986335779
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHH-HHCCCEEEEEECCCCE--EEEEECHHHHHHHHHHHHHCCC
Q ss_conf 999999999899987038995686578899999999997-4289619999777981--7999558989999999763210
Q gi|254781016|r 251 GEVAEKNALKMHATMIAASPPLLYWQKETIQGMERVWDA-RQQSIPIYFTLDAGPN--LKLLFTHKIEETIKQFFPEITI 327 (355)
Q Consensus 251 ~~i~e~dal~mHa~~~~s~P~~~Y~~~~t~~ii~~v~~~-R~~g~~v~fT~DAGPN--v~il~~~~~~~~i~~~l~~i~~ 327 (355)
T Consensus 246 ~~~l~~gW~-~KK~-ls~--------~ISN~~IDriy~~A~~~GA~~gKl~GaG~gGFllf~~~p~k~~~l~r~l~~~~~ 315 (333)
T COG2605 246 GQILDRGWE-AKKK-LSS--------RISNDAIDRIYELALKNGAYGGKLSGAGGGGFLLFFCDPSKRNELARALEKEQG 315 (333)
T ss_pred HHHHHHHHH-HHHH-HCC--------CCCCHHHHHHHHHHHHCCCHHCEEECCCCCCEEEEEECCCCHHHHHHHHHHHCC
T ss_conf 999976777-6455-335--------767477899999998667322223026886279999685424899999998449
Q ss_pred C-----CCCCCCCCCCC
Q ss_conf 0-----36888751200
Q gi|254781016|r 328 I-----DPLDSPDLWST 339 (355)
Q Consensus 328 ~-----~~~~~~~~~~~ 339 (355)
T Consensus 316 ~~~~~~Fd~~Gsr~i~i 332 (333)
T COG2605 316 FVVDTSFDKEGSRIIFI 332 (333)
T ss_pred CEEEEEECCCCEEEEEC
T ss_conf 73787764787079822