HHsearch alignment for GI: 254781016 and conserved domain: PRK03926
>PRK03926 mevalonate kinase; Provisional.
Probab=99.32 E-value=9.7e-09 Score=81.48 Aligned_cols=261 Identities=18% Similarity=0.187 Sum_probs=151.1
Q ss_pred EEEECCCCEEEE----ECCCCCCHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCEEEECCEECCCCCHHHHHHHHHHHH
Q ss_conf 789748842488----1167767011757898434681278107999971788857998787256652068999999742
Q gi|254781016|r 24 SSAFLPSNIALC----KYWGKRDSKLNLPLNNSLSLSLGHLGTITHITVIDSDADCIILNGQKISSQSSFFKKTTQFCDL 99 (355)
Q Consensus 24 ~ta~ap~NIALI----KYWGK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~~~~d~~~lnG~~~~~~~~~~~ri~~~l~~ 99 (355)
T Consensus 3 i~asAPGrv~LiGEH~v~~G~----------~aia~AI~-~~~~v~~~~~---~d~i~~~~~~~~-~~~~~~~~~~~l~~ 67 (302)
T PRK03926 3 VLCSAPGKIYLFGEHAVVYGK----------PAIACAID-LRTRVRAELN---DDSIYIQSDYGK-TGEVHPYVRAAIEK 67 (302)
T ss_pred EEEEECEEEEEEECCEEECCC----------EEEEEEEC-CCEEEEEEEC---CCEEEEECCCCC-CCCHHHHHHHHHHH
T ss_conf 999807899999387698696----------08999937-8199999998---990699754776-54200799999999
Q ss_pred HHHHCCC-EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH------C--CC-CCHHHHCCCCH
Q ss_conf 1676194-3999985023321101232247999999999981889998899988652------1--35-30343105620
Q gi|254781016|r 100 FRQFSKV-YFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARL------G--SG-SACRSFYRGFC 169 (355)
Q Consensus 100 ~r~~~~~-~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARl------G--SG-SA~RSi~GG~v 169 (355)
T Consensus 68 ~~~~~~~~G~~i~I~S~iP~gaGLgSSAAl~va~~~al~~~~g~~ls~~~la~la~~~E~~~~G~~sGiD~~~s~~Gg~~ 147 (302)
T PRK03926 68 VREEADKDGVDLSITSQIPVGSGLGSSAAVTVATIGALNKLLGLGLSLEEIAKMGHEVELLVQGAASPTDTYVSTIGGFV 147 (302)
T ss_pred HHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEE
T ss_conf 99756899837999656887778763899999999999985489989999999999999874689978899999759989
Q ss_pred HCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHH----HCH-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 02578987654413101566686421589997287667521056798876----185-6899997305509999999980
Q gi|254781016|r 170 EWICGTDQNGMDSFAVPFNNQWPDLRIGLLKIIDREKKIGSREAMEITRH----HSP-FFTQWTQQISTDLAHIKQAIID 244 (355)
Q Consensus 170 ~W~~g~~~~~sds~a~~~~~~~~dl~~~i~iv~~~~K~vsSt~gm~~~v~----tSp-~y~~r~~~~~~~~~~~~~ai~~ 244 (355)
T Consensus 148 ~~~~~~--------~l~----~~~~~--l~l~~tg~~--~~t~~~v~~v~~~~~~~~~~~~~~~~~~~~i~~~a~~~l~~ 211 (302)
T PRK03926 148 TIPDRK--------KLP----FMDCG--IVVGYTGSS--GSTKELVANVRKLYEEYPELIEPILESIGKLSEKAEELVLS 211 (302)
T ss_pred EECCCC--------CCC----CCCCC--EEEEECCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 966789--------777----78978--899983974--65999999999998766999999999999999999987765
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCC-CEEEEEECCC--CEEEEEECHHHHHHHHHH
Q ss_conf 9999999999999998999870389956865788999999999974289-6199997779--817999558989999999
Q gi|254781016|r 245 QDFIKLGEVAEKNALKMHATMIAASPPLLYWQKETIQGMERVWDARQQS-IPIYFTLDAG--PNLKLLFTHKIEETIKQF 321 (355)
Q Consensus 245 ~Df~~l~~i~e~dal~mHa~~~~s~P~~~Y~~~~t~~ii~~v~~~R~~g-~~v~fT~DAG--PNv~il~~~~~~~~i~~~ 321 (355)
T Consensus 212 ~d~~~lG~Lm~~~----h~ll-~~l-gVS--~peld~l---v~~a~~~GalGAKlt-GaG~GGc~iaL~~~d~~~~v~~a 279 (302)
T PRK03926 212 GDYVSIGELMNIN----QGLL-DAL-GVS--TKELSEL---VYAARTAGAFGAKIT-GAGGGGCMVALTAPDKCREVATA 279 (302)
T ss_pred CCHHHHHHHHHHH----HHHH-HHC-CCC--CHHHHHH---HHHHHHCCCCEEEEC-CCCCCCEEEEEECCCCHHHHHHH
T ss_conf 6499999999996----8878-731-689--8899999---999996798288805-89876289999461319999999
Q ss_pred HHHCCC
Q ss_conf 763210
Q gi|254781016|r 322 FPEITI 327 (355)
Q Consensus 322 l~~i~~ 327 (355)
T Consensus 280 l~~ag~ 285 (302)
T PRK03926 280 IGIAGG 285 (302)
T ss_pred HHHCCC
T ss_conf 997699