HHsearch alignment for GI: 254781016 and conserved domain: TIGR00144
>TIGR00144 beta_RFAP_syn beta-ribofuranosylaminobenzene 5'-phosphate synthase family; InterPro: IPR004422 This protein family contains several archaeal examples of beta-ribofuranosylaminobenzene 5-prime-phosphate synthase (beta-RFAP synthase), an enzyme involved in methanopterin biosynthesis . In some species, two members of this family are found. It is unclear whether both act as beta-RFAP synthase. This family is related to the GHMP kinases (Galactokinase, Homoserine kinase, Mevalonate kinase, Phosphomevalonate kinase). Members are found so far only in the Archaea and in Methylobacterium extorquens.They have an amino-terminal domain probably related to ATP binding..
Probab=91.56 E-value=1.3 Score=24.76 Aligned_cols=280 Identities=15% Similarity=0.118 Sum_probs=157.6
Q ss_pred CCEEEEECCCCCCHHHCCCCCCCEEEEECCCCEEEEEEECCC--CCCEEEECCEECC-CCCHHHHHHHHHHHHHHHHCC-
Q ss_conf 842488116776701175789843468127810799997178--8857998787256-652068999999742167619-
Q gi|254781016|r 30 SNIALCKYWGKRDSKLNLPLNNSLSLSLGHLGTITHITVIDS--DADCIILNGQKIS-SQSSFFKKTTQFCDLFRQFSK- 105 (355)
Q Consensus 30 ~NIALIKYWGK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~~--~~d~~~lnG~~~~-~~~~~~~ri~~~l~~~r~~~~- 105 (355)
T Consensus 9 ~~~~l~dl~g~~g-----~~dgg~g~~l~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 83 (337)
T TIGR00144 9 LHLTLIDLNGSIG-----RVDGGVGLALEEPELEIGGKESDDLGVEFDKKLVGKLGEPYNKSVRDRVYEAAAKTLDYIGG 83 (337)
T ss_pred EEEEEEECCCCCC-----CCCCCCCEEECCCCEEEECCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 0345552166422-----22455210112653144023333333101135565411045677888889989999987267
Q ss_pred -CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC---HHHHCCCCHHCCCCCC---CC
Q ss_conf -4399998502332110123224799999999998188999889998865213530---3431056200257898---76
Q gi|254781016|r 106 -VYFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARLGSGSA---CRSFYRGFCEWICGTD---QN 178 (355)
Q Consensus 106 -~~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlGSGSA---~RSi~GG~v~W~~g~~---~~ 178 (355)
T Consensus 84 d~~~~~~~~~~~~~~~glg~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~gg~~g~g~~~~~~gg~~~d~g~~~g~g~~ 163 (337)
T TIGR00144 84 DEGFDLEVLSLFPAHSGLGSGTQLSLAVGRLVSELYGLELTARELAEIVGRGGTSGIGVAAFEDGGFLVDGGHSTGKGKE 163 (337)
T ss_pred CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEECCCCEEEECCCCCCCCCC
T ss_conf 65511687530320014566512467788888887324310455666532777543301222157526645654466643
Q ss_pred CCCE------E-EEEC----CCCCC-CCEEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHH-HHHHHHHHHHHHHHC
Q ss_conf 5441------3-1015----66686-42158999728766752105679887618568999973-055099999999809
Q gi|254781016|r 179 GMDS------F-AVPF----NNQWP-DLRIGLLKIIDREKKIGSREAMEITRHHSPFFTQWTQQ-ISTDLAHIKQAIIDQ 245 (355)
Q Consensus 179 ~sds------~-a~~~----~~~~~-dl~~~i~iv~~~~K~vsSt~gm~~~v~tSp~y~~r~~~-~~~~~~~~~~ai~~~ 245 (355)
T Consensus 164 ~~~~~p~~~~~g~~p~p~~~~~d~p~~w~~-~~~~p~~~~~~~g~~~~~~~~~~cp~pl~~~~~~~~~~l~~~~p~~~~~ 242 (337)
T TIGR00144 164 KEDFLPSSASKGAKPAPVIARLDFPEDWNV-ILAIPELDRGVFGKREVNLFQKYCPVPLEDVEKLCHLILMKMLPAVVEG 242 (337)
T ss_pred CHHCCCCCCCCCCCCCCEEEECCCCCCCCE-EEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 000255321256776531221257745415-8873132111244113344554258766788999999998765566630
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHH-HHHHCCCEEEEEECCCCEEEEEECHH---HHHHHHHH
Q ss_conf 999999999999998999870389956865788999999999-97428961999977798179995589---89999999
Q gi|254781016|r 246 DFIKLGEVAEKNALKMHATMIAASPPLLYWQKETIQGMERVW-DARQQSIPIYFTLDAGPNLKLLFTHK---IEETIKQF 321 (355)
Q Consensus 246 Df~~l~~i~e~dal~mHa~~~~s~P~~~Y~~~~t~~ii~~v~-~~R~~g~~v~fT~DAGPNv~il~~~~---~~~~i~~~ 321 (355)
T Consensus 243 ~~~~~g~~~~~----~~~~g~~~---~~--~~~~~~~~~~~~~~~~~~g~~~~g~~~~gp~~~~~~d~~~~~~~~~~~~~ 313 (337)
T TIGR00144 243 DLDDFGEALNK----LQGLGFKK---VE--LELQGPLIKGLIDLLDKDGAPGAGLSSFGPTVYAVTDEKPGGIAGALNDI 313 (337)
T ss_pred HHHHHHHHHHH----HHHCCCHH---HH--HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHH
T ss_conf 15677788877----76313023---44--55533578888876541475313422247524652254401467778875
Q ss_pred HHH
Q ss_conf 763
Q gi|254781016|r 322 FPE 324 (355)
Q Consensus 322 l~~ 324 (355)
T Consensus 314 ~~~ 316 (337)
T TIGR00144 314 FGP 316 (337)
T ss_pred HHC
T ss_conf 200