HHsearch alignment of GI: 254781016 and MMDB domain: 1kkh_A_182-317
>1kkh_A (A:182-317) Mevalonate kinase; mixed beta sheet, phosphate-binding loop, beta-alpha-beta, transferase; 2.40A {Methanocaldococcus jannaschii}
Probab=95.31 E-value=0.25 Score=29.19 Aligned_cols=113 Identities=12% Similarity=0.059 Sum_probs=74.2
Q ss_pred EEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECH
Q ss_conf 99972876675210567988761856899997305509999999980999999999999999899987038995686578
Q gi|254781016|r 198 LLKIIDREKKIGSREAMEITRHHSPFFTQWTQQISTDLAHIKQAIIDQDFIKLGEVAEKNALKMHATMIAASPPLLYWQK 277 (355)
Q Consensus 198 i~iv~~~~K~vsSt~gm~~~v~tSp~y~~r~~~~~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~~~s~P~~~Y~~~ 277 (355)
++++.++.. .+|..+..-+...--.... ..+....+.+|+.++||+.|++++-.+-..+..+-.+ +|
T Consensus 13 ~~l~~tg~~--~~t~~~v~~v~~~~~~~~~---~~e~~~~~~~Al~~~d~~~lg~ll~~~~~~l~~l~~s--------~~ 79 (136)
T 1kkh_A 13 LIVYAEKRK--KKTAELVNEVAKIENKDEI---FKEIDKVIDEALKIKNKEDFGKLMTKNHELLKKLNIS--------TP 79 (136)
T ss_dssp EEEEEECCC--SCHHHHHHHHHTCTTHHHH---HHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTTTCC--------CH
T ss_pred HEEECCCCC--CCHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC--------CH
T ss_conf 122006744--4369999999877655689---9999998876664000688999999979999983899--------88
Q ss_pred HHHHHHHHHHHHHHCCCEEEEEECCC--CEEEEEECHHHHHHHHHHHHHCCC
Q ss_conf 89999999999742896199997779--817999558989999999763210
Q gi|254781016|r 278 ETIQGMERVWDARQQSIPIYFTLDAG--PNLKLLFTHKIEETIKQFFPEITI 327 (355)
Q Consensus 278 ~t~~ii~~v~~~R~~g~~v~fT~DAG--PNv~il~~~~~~~~i~~~l~~i~~ 327 (355)
..-++++.. ++.|..+-.| .|| -.|..|++++..+.+.+.+.+...
T Consensus 80 ~l~~l~~~a---~~~g~gaK~s-GAG~GG~~i~l~~~~~~~~~~~~~~~~~~ 127 (136)
T 1kkh_A 80 KLDRIVDIG---NRFGFGAKLT-GAGGGGCVIILVNEEKEKELLKELNKEDV 127 (136)
T ss_dssp HHHHHHHHH---HHHSSEEEEC-SSSSSEEEEEECCGGGHHHHHHHHHTSSC
T ss_pred HHHHHHHHH---HHCCCEEEEC-CCCCCCEEEEEECHHHHHHHHHHHHHCCC
T ss_conf 999999999---8379389982-79863889999881479999999997498