HHsearch alignment of GI: 254781016 and MMDB domain: 1uek_A_1-148

>1uek_A (A:1-148) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase; non-mevalonate pathway, GHMP superfamily; 1.70A {Thermus thermophilus}
Probab=98.58  E-value=4.9e-07  Score=69.11  Aligned_cols=136  Identities=17%  Similarity=0.118  Sum_probs=87.0

Q ss_pred             EEECCCCEEE-EECCCCCCHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCEEEECCEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf             8974884248-811677670117578984346812781079999717888579987872566520689999997421676
Q gi|254781016|r   25 SAFLPSNIAL-CKYWGKRDSKLNLPLNNSLSLSLGHLGTITHITVIDSDADCIILNGQKISSQSSFFKKTTQFCDLFRQF  103 (355)
Q Consensus        25 ta~ap~NIAL-IKYWGK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~~~~d~~~lnG~~~~~~~~~~~ri~~~l~~~r~~  103 (355)
                      +++||..|.| ..-.|++-.   ....-..-+..-+.+.+.+++..+...  ....-.   ...   ..+.+.++.+++.
T Consensus         2 ~v~aPa~i~lgl~v~g~~~d---~y~~~~~~~~~i~~~~~~~i~~~~~~~--~~~~~~---~~~---n~v~~~~~~l~~~   70 (148)
T 1uek_A            2 ERLAPAKVNLGLSVRFRRED---GYHELHTLFAPFSLADRLVVEPVSSGL--HFQGPY---GRE---NLAYRAASLYLEA   70 (148)
T ss_dssp             EEEEEEEEEEEEEEEEECTT---SSEEEEEEEEEEEEEEEEEEEEESSCE--EEESTT---GGG---SHHHHHHHHHHHH
T ss_pred             CEECCCEECCCEEECCCCCC---CCCEEEEEEEEECCCEEEEEEECCCCC--EECCCC---CCC---CHHHHHHHHHHHC
T ss_conf             65205207114042786999---963225899991783699999868995--787888---743---1235876334440


Q ss_pred             CCC--EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCHH-CCCC
Q ss_conf             194--3999985023321101232247999999999981889998899988652135303431056200-2578
Q gi|254781016|r  104 SKV--YFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARLGSGSACRSFYRGFCE-WICG  174 (355)
Q Consensus       104 ~~~--~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlGSGSA~RSi~GG~v~-W~~g  174 (355)
                      .+.  .++|..++++|.++||+||||..+|+..|++++++++++.+++.  ++.|++-+| +++||++. ++.|
T Consensus        71 ~~~~~~~~i~i~~~IP~g~GLGSssa~~~a~~~al~~~~~~~l~~~ela--~~~~~dv~~-~~~gg~~~~~g~g  141 (148)
T 1uek_A           71 AGQPGGVRILLEKRIPEGAGLGGGSSDAAQVLLALQALYPAEVDLFALA--RTLGADVPF-FLLGRGAEARGVG  141 (148)
T ss_dssp             TTCCCEEEEEEECCSCSSSSSCHHHHHHHHHHHHHHHHSCSCCCHHHHH--HHHCTTHHH-HHHCSEEEEETTT
T ss_pred             CCCCHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH--HHHHHCCCC-EECCCCCCCCCCC
T ss_conf             4863122457631521012335672289999999865412220577888--764203210-2316411235765