Query gi|254781016|ref|YP_003065429.1| diphosphomevalonate decarboxylase/isopentenyl-diphosphate delta-isomerase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 355
No_of_seqs 128 out of 512
Neff 5.8
Searched_HMMs 33803
Date Wed Jun 1 20:27:53 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781016.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >1fi4_A Mevalonate 5-diphospha 100.0 0 0 470.3 20.3 195 30-327 1-200 (249)
2 >2hke_A Diphosphomevalonate de 100.0 2.1E-43 0 323.3 16.4 136 190-325 1-139 (186)
3 >2hk2_A Diphosphomevalonate de 100.0 2.5E-43 0 322.8 15.9 135 191-325 2-136 (147)
4 >2gs8_A Mevalonate pyrophospha 100.0 1.1E-42 0 318.4 16.1 145 192-336 1-146 (148)
5 >3lto_A Mevalonate diphosphate 100.0 1.4E-41 0 310.6 13.6 134 191-325 1-135 (151)
6 >3f0n_A Mevalonate pyrophospha 100.0 1.8E-29 5.4E-34 225.9 18.2 137 190-326 1-140 (185)
7 >3f0n_A Mevalonate pyrophospha 99.9 2.8E-23 8.3E-28 182.7 15.6 181 7-190 3-203 (229)
8 >3lto_A Mevalonate diphosphate 99.9 6.3E-22 1.9E-26 173.2 12.7 153 23-175 2-165 (172)
9 >2hke_A Diphosphomevalonate de 99.8 3.4E-18 1E-22 147.1 17.7 169 22-198 4-182 (194)
10 >2gs8_A Mevalonate pyrophospha 99.8 2E-18 5.9E-23 148.8 11.9 158 18-177 3-162 (169)
11 >2hk2_A Diphosphomevalonate de 99.6 2E-14 5.9E-19 120.8 15.4 168 21-192 6-176 (184)
12 >1h72_C HK, homoserine kinase; 99.3 2.7E-11 7.9E-16 98.9 11.9 138 23-172 2-150 (171)
13 >3hul_A HSK, HK, homoserine ki 99.1 1.4E-09 4.1E-14 87.0 9.9 134 23-171 2-138 (169)
14 >1oj4_A 4-diphosphocytidyl-2-C 99.0 2.5E-09 7.5E-14 85.1 10.5 145 23-172 2-154 (283)
15 >1fi4_A Mevalonate 5-diphospha 99.0 3.2E-09 9.5E-14 84.4 10.2 121 54-174 27-160 (167)
16 >2v8p_A 4-diphosphocytidyl-2-C 99.0 1E-08 3.1E-13 80.8 12.6 142 22-175 3-150 (158)
17 >2oi2_A Mevalonate kinase; enz 98.9 3.6E-08 1.1E-12 77.1 12.0 140 22-176 4-152 (159)
18 >1kkh_A Mevalonate kinase; mix 98.8 2.9E-08 8.6E-13 77.7 9.9 144 21-175 3-176 (181)
19 >3k85_A D-glycero-D-manno-hept 98.7 1.2E-07 3.5E-12 73.4 10.3 162 23-187 3-187 (213)
20 >2hfs_A Mevalonate kinase, put 98.7 3.6E-07 1.1E-11 70.0 12.4 146 20-172 10-171 (184)
21 >2a2c_A N-acetylgalactosamine 98.6 4.7E-07 1.4E-11 69.3 10.7 143 20-173 52-224 (249)
22 >1uek_A 4-(cytidine 5'-diphosp 98.6 4.9E-07 1.5E-11 69.1 9.4 136 25-174 2-141 (148)
23 >1pie_A Galactokinase; galacto 98.5 1.7E-06 5E-11 65.4 10.8 151 10-172 36-216 (242)
24 >2cz9_A Probable galactokinase 98.4 4.6E-06 1.4E-10 62.3 10.1 141 24-171 2-161 (185)
25 >3k17_A LIN0012 protein; prote 98.3 7.8E-06 2.3E-10 60.7 10.4 145 21-174 4-178 (225)
26 >1wuu_A Galactokinase; galacto 98.2 2.5E-05 7.4E-10 57.2 10.4 152 20-171 33-205 (232)
27 >1kvk_A MK, mevalonate kinase; 97.9 0.00028 8.3E-09 49.8 11.2 68 107-174 128-219 (248)
28 >2oi2_A Mevalonate kinase; enz 97.4 0.016 4.7E-07 37.6 15.8 119 197-327 4-125 (133)
29 >2aj4_A Galactokinase; galacto 97.3 0.011 3.3E-07 38.7 12.9 70 106-175 172-253 (278)
30 >2cz9_A Probable galactokinase 96.9 0.02 5.9E-07 36.9 10.7 98 231-338 64-163 (165)
31 >2hfs_A Mevalonate kinase, put 96.3 0.098 2.9E-06 32.1 15.8 121 195-327 3-130 (148)
32 >3k17_A LIN0012 protein; prote 95.9 0.16 4.8E-06 30.6 14.5 126 192-327 1-134 (140)
33 >1kkh_A Mevalonate kinase; mix 95.3 0.25 7.5E-06 29.2 14.0 113 198-327 13-127 (136)
34 >3k85_A D-glycero-D-manno-hept 94.8 0.037 1.1E-06 35.0 4.1 121 194-327 8-137 (144)
35 >3hul_A HSK, HK, homoserine ki 93.9 0.51 1.5E-05 27.1 8.3 86 230-327 32-118 (129)
36 >1h72_C HK, homoserine kinase; 92.1 0.96 2.8E-05 25.1 9.0 103 209-325 13-116 (125)
37 >2aj4_A Galactokinase; galacto 90.0 0.18 5.3E-06 30.3 2.2 75 239-324 18-98 (121)
38 >1pie_A Galactokinase; galacto 87.7 2.1 6.3E-05 22.7 10.3 105 223-337 63-173 (177)
39 >1kvk_A MK, mevalonate kinase; 83.4 3.3 9.8E-05 21.4 11.8 117 192-324 1-131 (147)
40 >1wuu_A Galactokinase; galacto 83.4 3.4 9.9E-05 21.3 10.6 85 231-325 69-156 (167)
41 >2a2c_A N-acetylgalactosamine 77.3 5.2 0.00015 20.0 7.7 74 243-326 15-90 (109)
42 >1uek_A 4-(cytidine 5'-diphosp 73.1 4.6 0.00013 20.4 3.8 79 231-326 31-110 (127)
43 >2v8p_A 4-diphosphocytidyl-2-C 63.6 8.4 0.00025 18.5 3.6 77 229-323 28-105 (113)
44 >3fkr_A L-2-keto-3-deoxyarabon 48.8 15 0.00045 16.8 2.8 81 231-329 221-304 (309)
45 >3h7c_X Agmatine deiminase; st 43.1 17 0.00051 16.4 2.4 38 303-340 57-94 (114)
46 >3igx_A Transaldolase; TAla, I 38.0 25 0.00075 15.2 7.1 62 253-314 113-188 (324)
47 >1kwm_A Procarboxypeptidase B; 35.2 28 0.00082 14.9 3.5 65 273-337 13-83 (98)
48 >1sr2_A Putative sensor-like h 31.5 32 0.00094 14.5 3.7 34 221-254 34-67 (116)
49 >2ts1_A Tyrosyl-tRNA synthetas 30.5 33 0.00098 14.4 4.2 37 220-256 1-39 (174)
50 >1yle_A Arginine N-succinyltra 26.6 30 0.00088 14.7 1.4 76 242-321 186-275 (342)
51 >1jil_A Tyrrs, tyrosyl-tRNA sy 24.4 42 0.0012 13.7 4.7 37 220-256 1-39 (174)
52 >1rdt_E LXXLL motif coactivato 23.5 35 0.001 14.2 1.3 16 146-161 10-25 (26)
53 >1odo_A Putative cytochrome P4 21.8 47 0.0014 13.3 3.1 37 282-319 17-53 (127)
54 >3iqt_A Signal transduction hi 21.7 47 0.0014 13.3 2.6 33 222-254 33-65 (123)
55 >3d0c_A Dihydrodipicolinate sy 21.7 47 0.0014 13.3 5.5 87 231-332 2-90 (97)
56 >1ny1_A Probable polysaccharid 21.1 23 0.00069 15.5 -0.0 36 48-83 40-81 (240)
57 >2pid_A Tyrosyl-tRNA synthetas 20.8 49 0.0015 13.2 4.7 39 218-256 19-59 (107)
58 >2wvr_C DNA replication factor 20.8 24 0.00071 15.4 0.0 37 221-257 503-539 (546)
59 >1jqg_A Carboxypeptidase A; Pr 20.6 50 0.0015 13.2 3.5 53 275-327 29-82 (91)
No 1
>>1fi4_A Mevalonate 5-diphosphate decarboxylase; mixed alpha/beta structure, ATP binding, cholesterol biosynthesis, structural genomics, PSI; 2.27A {Saccharomyces cerevisiae} (A:32-61,A:179-397)
Probab=100.00 E-value=0 Score=470.33 Aligned_cols=195 Identities=29% Similarity=0.567 Sum_probs=185.9
Q ss_pred CCEEEEECCCCCCHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCEEEECCEECCCCCHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf 84248811677670117578984346812781079999717888579987872566520689999997421676194399
Q gi|254781016|r 30 SNIALCKYWGKRDSKLNLPLNNSLSLSLGHLGTITHITVIDSDADCIILNGQKISSQSSFFKKTTQFCDLFRQFSKVYFL 109 (355)
Q Consensus 30 ~NIALIKYWGK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~~~~d~~~lnG~~~~~~~~~~~ri~~~l~~~r~~~~~~~~ 109 (355)
.||||||||||||+++|||+|+|||+|||
T Consensus 1 vNIAliKYWGKrd~~l~lP~n~SlS~TL~--------------------------------------------------- 29 (249)
T 1fi4_A 1 VNIATLKYWGKRDTKLNLPTNSSISVTLS--------------------------------------------------- 29 (249)
T ss_dssp CEEEEECCCCEEETTTTEESSCEEEEEBC---------------------------------------------------
T ss_pred CCEEEEECCCCCCCCCCCCCCCEEEEEEC---------------------------------------------------
T ss_conf 50457622577688778889983668934---------------------------------------------------
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCHHCCCCCCCCCCCEEEEECC-
Q ss_conf 9985023321101232247999999999981889998899988652135303431056200257898765441310156-
Q gi|254781016|r 110 IETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARLGSGSACRSFYRGFCEWICGTDQNGMDSFAVPFN- 188 (355)
Q Consensus 110 I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlGSGSA~RSi~GG~v~W~~g~~~~~sds~a~~~~- 188 (355)
+|+|||||+|++|.++|++||||+++.
T Consensus 30 ----------------------------------------------------~Si~GGfv~W~~G~~~dg~dS~A~~i~~ 57 (249)
T 1fi4_A 30 ----------------------------------------------------QSLFGGYVAWEXGKAEDGHDSXAVQIAD 57 (249)
T ss_dssp ----------------------------------------------------TGGSSSEEEEECCSCTTCTTCEEEEEEC
T ss_pred ----------------------------------------------------CHHHCCEEEECCCCCCCCCCCEEEECCC
T ss_conf ----------------------------------------------------8541884884278888877723566466
Q ss_pred -CCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHH-HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf -668642158999728766752105679887618568999973-055099999999809999999999999998999870
Q gi|254781016|r 189 -NQWPDLRIGLLKIIDREKKIGSREAMEITRHHSPFFTQWTQQ-ISTDLAHIKQAIIDQDFIKLGEVAEKNALKMHATMI 266 (355)
Q Consensus 189 -~~~~dl~~~i~iv~~~~K~vsSt~gm~~~v~tSp~y~~r~~~-~~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~~ 266 (355)
+|||||++++++|++++|+|+||+||+++++|||||+.|++. ++.++.+|++||+++||++||+++|+|+++|||+||
T Consensus 58 ~~~w~dl~iii~vv~~~~K~vsSt~gM~~~~~TS~~y~~w~~~~a~~~l~~~~~Ai~~~Df~~~~ei~e~ds~~mHA~~l 137 (249)
T 1fi4_A 58 SSDWPQXKACVLVVSDIKKDVSSTQGXQLTVATSELFKERIEHVVPKRFEVXRKAIVEKDFATFAKETXXDSNSFHATCL 137 (249)
T ss_dssp GGGSTTEEEEEEEECCCSCCCCHHHHHHHHHHHCSHHHHHHHTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHEEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 43310110699994388776652577777765282357899987899999999999808999999999999999999985
Q ss_pred CCCCCEEEECHHHHHHHHHHHHHHH--CCCEEEEEECCCCEEEEEECHHHHHHHHHHHHHCCC
Q ss_conf 3899568657889999999999742--896199997779817999558989999999763210
Q gi|254781016|r 267 AASPPLLYWQKETIQGMERVWDARQ--QSIPIYFTLDAGPNLKLLFTHKIEETIKQFFPEITI 327 (355)
Q Consensus 267 ~s~P~~~Y~~~~t~~ii~~v~~~R~--~g~~v~fT~DAGPNv~il~~~~~~~~i~~~l~~i~~ 327 (355)
++.|||+||+|+|+++|+.|+++|+ +|++|||||||||||||||++++++.|.+++.+...
T Consensus 138 ~s~Pp~~Y~~~~S~~ii~~V~~lr~~~~g~~v~yT~DAGPNv~vl~~~~~~~~i~~~l~~~f~ 200 (249)
T 1fi4_A 138 DSFPPIFYXNDTSKRIISWCHTINQFYGETIVAYTFDAGPNAVLYYLAENESKLFAFIYKLFG 200 (249)
T ss_dssp TSSSCCCCCCHHHHHHHHHHHHHHHHHTSCCEEEEECSSSCEEEEEEGGGHHHHHHHHHHHHT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECHHHHHHHHHHHHHHCC
T ss_conf 479974876760899999999999865895189995788667999656349999999999758
No 2
>>2hke_A Diphosphomevalonate decarboxylase, putative; mevalonate diphosphate decarboxylase, lyase; 1.80A {Trypanosoma brucei} (A:179-364)
Probab=100.00 E-value=2.1e-43 Score=323.27 Aligned_cols=136 Identities=17% Similarity=0.299 Sum_probs=132.4
Q ss_pred CCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHH-HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 68642158999728766752105679887618568999973-05509999999980999999999999999899987038
Q gi|254781016|r 190 QWPDLRIGLLKIIDREKKIGSREAMEITRHHSPFFTQWTQQ-ISTDLAHIKQAIIDQDFIKLGEVAEKNALKMHATMIAA 268 (355)
Q Consensus 190 ~~~dl~~~i~iv~~~~K~vsSt~gm~~~v~tSp~y~~r~~~-~~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~~~s 268 (355)
|||||++++++|++++|+||||+||+++++|||||+.|+++ +++++++|++||+++||++||+++|+|+++|||+||++
T Consensus 1 hwpdl~~ii~vv~~~~K~vsSt~gM~~tv~TS~~y~~r~~~~~~~~l~~~~~Ai~~~Df~~~gei~e~ds~~mHA~~l~s 80 (186)
T 2hke_A 1 HWPEIQVMCAVLKGAQKDVSSTKGMQQSLKTSPLMKKRISETVPERMKIASRAIKARDFATFAEIAMLESDDLQEICATT 80 (186)
T ss_dssp SCTTEEEEEEECCCCSCCCCHHHHHHHHHHHCTTHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 56550069999636767677658899998819427889987516789999999980999999999999999999998537
Q ss_pred CCCEEEECHHHHHHHHHHHHHHHC--CCEEEEEECCCCEEEEEECHHHHHHHHHHHHHC
Q ss_conf 995686578899999999997428--961999977798179995589899999997632
Q gi|254781016|r 269 SPPLLYWQKETIQGMERVWDARQQ--SIPIYFTLDAGPNLKLLFTHKIEETIKQFFPEI 325 (355)
Q Consensus 269 ~P~~~Y~~~~t~~ii~~v~~~R~~--g~~v~fT~DAGPNv~il~~~~~~~~i~~~l~~i 325 (355)
.|||.||+|+|+++|++|+++|++ |++|||||||||||||||+++++++|.++|.+.
T Consensus 81 ~Pp~~Y~~~~S~~ii~~V~~lr~~~~g~~v~yT~DAGPNv~il~~~~~~~~i~~~l~~~ 139 (186)
T 2hke_A 81 EPKITYATEDSYAMIRLVKAYNAKKGRTALAYTFDAGANCFLFVLKEDLPEAVAMLMEH 139 (186)
T ss_dssp SSCCCCCCHHHHHHHHHHHHHHHHHTSCCEEEECCSSSCEEEEEEGGGHHHHHHHHHHH
T ss_pred CCCEEEECCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHHH
T ss_conf 99879989479999999999998569902999978898679997351499999999997
No 3
>>2hk2_A Diphosphomevalonate decarboxylase; mevalonate diphosphate decarboxylase, lyase; 2.30A {Staphylococcus aureus} PDB: 2hk3_A (A:176-322)
Probab=100.00 E-value=2.5e-43 Score=322.77 Aligned_cols=135 Identities=40% Similarity=0.634 Sum_probs=133.2
Q ss_pred CCCCEEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 86421589997287667521056798876185689999730550999999998099999999999999989998703899
Q gi|254781016|r 191 WPDLRIGLLKIIDREKKIGSREAMEITRHHSPFFTQWTQQISTDLAHIKQAIIDQDFIKLGEVAEKNALKMHATMIAASP 270 (355)
Q Consensus 191 ~~dl~~~i~iv~~~~K~vsSt~gm~~~v~tSp~y~~r~~~~~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~~~s~P 270 (355)
||||++++++|++++|+||||+||+++++|||||+.|+++++.++.+|++||+++||++||+++|+|+++|||+||++.|
T Consensus 2 w~dl~~iv~vv~~~~K~vsSt~gM~~~v~TSp~y~~w~~~~~~~~~~~~~Ai~~~Df~~~gei~e~ds~~mHA~~~~s~P 81 (147)
T 2hk2_A 2 EDDLAMIFVVINQHSKKVPSRYGMSLTRNTSRFYQYWLDHIDEDLAEAKAAIQDKDFKRLGEVIEENGLRMHATNLGSTP 81 (147)
T ss_dssp GGGEEEEEECCCCSSCCCCHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTSSS
T ss_pred CHHHCEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 53340689835756653023555431101251899999864477999999997699999999997608767987640588
Q ss_pred CEEEECHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECHHHHHHHHHHHHHC
Q ss_conf 5686578899999999997428961999977798179995589899999997632
Q gi|254781016|r 271 PLLYWQKETIQGMERVWDARQQSIPIYFTLDAGPNLKLLFTHKIEETIKQFFPEI 325 (355)
Q Consensus 271 ~~~Y~~~~t~~ii~~v~~~R~~g~~v~fT~DAGPNv~il~~~~~~~~i~~~l~~i 325 (355)
||+||+|+|+++|+.|+++|++|++|||||||||||||||+++++++|.++|.+.
T Consensus 82 p~~Y~~~~s~~ii~~V~~~r~~g~~~~~T~DAGPNv~vl~~~~~~~~i~~~l~~~ 136 (147)
T 2hk2_A 82 PFTYLVQESYDVMALVHECREAGYPCYFTMDAGPNVKILVEKKNKQQIIDKLLTQ 136 (147)
T ss_dssp CCCSCCHHHHHHHHHHHHHHHTTCCEEEECCSSSCEEEEEEHHHHHHHHHHHTTT
T ss_pred CCHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHH
T ss_conf 6110252209999999999858985999947772069997686899999999854
No 4
>>2gs8_A Mevalonate pyrophosphate decarboxylase; structural genomics, PSI, protein structure initiative; HET: MSE; 1.50A {Streptococcus pyogenes m1 gas} (A:170-317)
Probab=100.00 E-value=1.1e-42 Score=318.38 Aligned_cols=145 Identities=33% Similarity=0.450 Sum_probs=139.0
Q ss_pred CCCEEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 64215899972876675210567988761856899997305509999999980999999999999999899987038995
Q gi|254781016|r 192 PDLRIGLLKIIDREKKIGSREAMEITRHHSPFFTQWTQQISTDLAHIKQAIIDQDFIKLGEVAEKNALKMHATMIAASPP 271 (355)
Q Consensus 192 ~dl~~~i~iv~~~~K~vsSt~gm~~~v~tSp~y~~r~~~~~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~~~s~P~ 271 (355)
.|+++++++|++++|+||||+||+++++|||||+.|+++++.++.++++||+++||++||+++|+|+++|||+||+++||
T Consensus 1 lDl~~ii~vv~~~~K~vsSt~gM~~t~~tSp~y~~w~~~~~~~~~~~~~Ai~~~Df~~~gei~e~ds~~mHA~~l~s~Pp 80 (148)
T 2gs8_A 1 LKXAXIXLVLNAAKKPISSREGXKLCRDTSTTFDQWVEQSAIDYQHXLTYLKTNNFEKVGQLTEANALAXHATTKTANPP 80 (148)
T ss_dssp CCEEEEEEECCCSSCCSCHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTSSSC
T ss_pred CCCCCCEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 42001301203334223556788753233157899998734789999999860759999999999999888887605553
Q ss_pred EEEECHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECHHHHHHHHHHHHHC-CCCCCCCCCCC
Q ss_conf 686578899999999997428961999977798179995589899999997632-10036888751
Q gi|254781016|r 272 LLYWQKETIQGMERVWDARQQSIPIYFTLDAGPNLKLLFTHKIEETIKQFFPEI-TIIDPLDSPDL 336 (355)
Q Consensus 272 ~~Y~~~~t~~ii~~v~~~R~~g~~v~fT~DAGPNv~il~~~~~~~~i~~~l~~i-~~~~~~~~~~~ 336 (355)
|+||+|+|+++|+.|+++|++|++|||||||||||||||+++++++|.++|.+. ..+.+..|++.
T Consensus 81 ~~Y~~~~s~~ii~~V~~lr~~g~~~~~T~DAGPNv~il~~~~~~~~i~~~l~~~f~~i~~~~G~g~ 146 (148)
T 2gs8_A 81 FSYLTKESYQAXEAVKELRQEGFACYFTXDAGPNVKVLCLEKDLAQLAERLGKNYRIIVSKTKDLP 146 (148)
T ss_dssp CCSCCHHHHHHHHHHHHHHHTTCCEEEECCSSSCEEEEEEGGGHHHHHHHHHTTSEEEEEEBCCCC
T ss_pred EEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHCCEEECCCCCCC
T ss_conf 010482289999999999858984999827780679998685799999999773069964789999
No 5
>>3lto_A Mevalonate diphosphate decarboxylase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.27A {Legionella pneumophila} (A:173-323)
Probab=100.00 E-value=1.4e-41 Score=310.58 Aligned_cols=134 Identities=22% Similarity=0.355 Sum_probs=130.1
Q ss_pred CCCCEEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 86421589997287667521056798876185689999730550999999998099999999999999989998703899
Q gi|254781016|r 191 WPDLRIGLLKIIDREKKIGSREAMEITRHHSPFFTQWTQQISTDLAHIKQAIIDQDFIKLGEVAEKNALKMHATMIAASP 270 (355)
Q Consensus 191 ~~dl~~~i~iv~~~~K~vsSt~gm~~~v~tSp~y~~r~~~~~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~~~s~P 270 (355)
||||++++++|++++|+||||+||+. ++|||||+.|+++++.++.+|++||+++||++||+++|+|+++|||+||++.|
T Consensus 1 w~dl~~iv~vv~~~~K~vsS~~gM~t-v~tSp~y~~w~~~~~~~l~~~~~Ai~~~Df~~~gei~e~~s~~mHA~~l~s~P 79 (151)
T 3lto_A 1 YKDLLHQVIVISSQEKEIPSRVAHKL-VKTSPFYETRSERAEANLKLLLNAFENKDWTSIYQICWHEFLDXHQLFKTCEK 79 (151)
T ss_dssp CCSCEEEEEECCCCTTCCCHHHHHHH-GGGSTTTTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred CCCCCCEEEEEECCCCCCCCHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 55524389999468877664888852-24684539999997886999999998099999999999889878999972599
Q ss_pred CEEEECHHHHHHHHHHHHHHHC-CCEEEEEECCCCEEEEEECHHHHHHHHHHHHHC
Q ss_conf 5686578899999999997428-961999977798179995589899999997632
Q gi|254781016|r 271 PLLYWQKETIQGMERVWDARQQ-SIPIYFTLDAGPNLKLLFTHKIEETIKQFFPEI 325 (355)
Q Consensus 271 ~~~Y~~~~t~~ii~~v~~~R~~-g~~v~fT~DAGPNv~il~~~~~~~~i~~~l~~i 325 (355)
||.||+|+|+++|++|+++|++ |++|||||||||||||||++++++.|+++|.+.
T Consensus 80 p~~Y~~~~s~~ii~~V~~~r~~~g~~~~~T~DAGPNv~vl~~~~~~~~i~~~l~~~ 135 (151)
T 3lto_A 80 PFSYITDNTLHILSVIEKFWNEKGDGPVVTXDAGPNVHLLYRSDQTDLARQFKSDH 135 (151)
T ss_dssp CCCSCCHHHHHHHHHHHHHHHHHSCCCEEECCSSSCEEEEECGGGHHHHHHHHHHH
T ss_pred CEEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCHHHHHHHHHHHH
T ss_conf 83513805999999999999977995799957883779998514299999999987
No 6
>>3f0n_A Mevalonate pyrophosphate decarboxylase; cholesterol biosynthesis, lipid synthesis, lyase, steroid biosynthesis, sterol biosynthesis; 1.90A {Mus musculus} PDB: 3d4j_A (A:205-389)
Probab=99.97 E-value=1.8e-29 Score=225.92 Aligned_cols=137 Identities=21% Similarity=0.375 Sum_probs=131.0
Q ss_pred CCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHH-HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 68642158999728766752105679887618568999973-05509999999980999999999999999899987038
Q gi|254781016|r 190 QWPDLRIGLLKIIDREKKIGSREAMEITRHHSPFFTQWTQQ-ISTDLAHIKQAIIDQDFIKLGEVAEKNALKMHATMIAA 268 (355)
Q Consensus 190 ~~~dl~~~i~iv~~~~K~vsSt~gm~~~v~tSp~y~~r~~~-~~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~~~s 268 (355)
|||||++++++++..+|+++||+||++++.|||+|+.|... ...++.++++||+++||++||++++.+.++||++|+.|
T Consensus 1 ~~~~L~~ii~~~~~~~K~v~S~~~m~~~~~ts~~~r~r~~~~e~~rv~~~~~al~~~D~~~lG~l~~~s~~sl~~~~~~s 80 (185)
T 3f0n_A 1 HWPQLRILILVVSADKKQTGSTVGMQTSVETSTLLKFRAESVVPERMKEMTRCIQEQDFQGFAQLTMKDSNQFHATCLDT 80 (185)
T ss_dssp SCTTEEEEEEEESCCC-CCCHHHHHHHHHHHCHHHHHHHHHTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 56510069998246556677678776401036479999998658999999999995999999999999999999998547
Q ss_pred CCCEEEECHHHHHHHHHHHHHHH--CCCEEEEEECCCCEEEEEECHHHHHHHHHHHHHCC
Q ss_conf 99568657889999999999742--89619999777981799955898999999976321
Q gi|254781016|r 269 SPPLLYWQKETIQGMERVWDARQ--QSIPIYFTLDAGPNLKLLFTHKIEETIKQFFPEIT 326 (355)
Q Consensus 269 ~P~~~Y~~~~t~~ii~~v~~~R~--~g~~v~fT~DAGPNv~il~~~~~~~~i~~~l~~i~ 326 (355)
.|++.||++.++++|+.++.+|. .|+++||||||||||++||++++++.+.+.+.+..
T Consensus 81 ~peld~l~~~s~~~~~~v~g~R~~g~G~~~~~T~DaGg~vv~L~~~~~~~~i~~~l~~~f 140 (185)
T 3f0n_A 81 FPPISYLNDTSRRIIQLVHRFNTHHGQTKVAYTFDAGPNAVIFTLEDTVAEFVAAVRHSF 140 (185)
T ss_dssp SSCCCCCCHHHHHHHHHHHHHHHHHTSCCEEEECCSSSCEEEEEEHHHHHHHHHHHHHHS
T ss_pred CCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHC
T ss_conf 998587676489999999999996699768999788878799973254999999999878
No 7
>>3f0n_A Mevalonate pyrophosphate decarboxylase; cholesterol biosynthesis, lipid synthesis, lyase, steroid biosynthesis, sterol biosynthesis; 1.90A {Mus musculus} PDB: 3d4j_A (A:1-204,A:390-414)
Probab=99.91 E-value=2.8e-23 Score=182.67 Aligned_cols=181 Identities=38% Similarity=0.552 Sum_probs=144.0
Q ss_pred HHHHHHHHCCCCCC----CCCEEEECCCCEEEEECCCCCCHHHCCCCCCCEEEEEC--CCCEEEEEEECCC-CCCEEEEC
Q ss_conf 98888740346787----76378974884248811677670117578984346812--7810799997178-88579987
Q gi|254781016|r 7 HILHRYIGECNPKI----NEKSSAFLPSNIALCKYWGKRDSKLNLPLNNSLSLSLG--HLGTITHITVIDS-DADCIILN 79 (355)
Q Consensus 7 ~~~~~~~~~~~~~~----~~~~ta~ap~NIALIKYWGK~d~~l~lP~n~SiS~TL~--~~~T~T~v~~~~~-~~d~~~ln 79 (355)
|-.|-|..+.+..- ..+.|++||.+|+|++|||+++....+|.|.+|++|+. ..++.+++..... ..|+++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~it~~APgri~LiGeh~d~~~~~v~~~n~~l~v~~~~~~~~~~~~~~~~~~~~~d~i~i~ 82 (229)
T 3f0n_A 3 HHHHHSSGRENLYFQGPQDLMVTCTAPVNIAVIKYWGKRDEALILPINSSLSVTLHQDQLKTTTTVAISKDFTEDRIWLN 82 (229)
T ss_dssp --------CTTSCC----CEEEEEEECCEEEEECCCCEEETTTTEESSCEEEEEBCTTTSCEEEEEEECTTCCSCEEEET
T ss_pred CCCCCCCCCCCCEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCEEEEC
T ss_conf 54445566555202166663899982367525412575688778999980579805888678999997888878789999
Q ss_pred CEECCCCCHHHHH-----------HHHHHHHHHHHC--CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH
Q ss_conf 8725665206899-----------999974216761--943999985023321101232247999999999981889998
Q gi|254781016|r 80 GQKISSQSSFFKK-----------TTQFCDLFRQFS--KVYFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKS 146 (355)
Q Consensus 80 G~~~~~~~~~~~r-----------i~~~l~~~r~~~--~~~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~ 146 (355)
+.+.......... +.++.+.+++.. ...++|+..+++|.++||+||||..+|++.|++++++++++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~nlv~~~~~~~~~~~~~~~g~~i~i~s~IP~~aGLGSSAA~avA~l~Al~~~~~~~ls~ 162 (229)
T 3f0n_A 83 GREEDVGQPRLQACLREIRRLARKRRSTEDGDTLPLSLSYKVHVASVNNFPTAAGLASSAAGYACLAYTLAQVYGVEGDL 162 (229)
T ss_dssp TEEECTTCHHHHHHHHHHHHHHHC-------CCHHHHHHSCEEEEEEECCCGGGCCCHHHHHHHHHHHHHHHHHTCCSCC
T ss_pred CEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 99777635789999999999987631112233465455642699851476166678887999999999999885353359
Q ss_pred HHHHHHHHHCCCCCHHHHCCCCHHCCCCCCCCCCCEEEEECCCC
Q ss_conf 89998865213530343105620025789876544131015666
Q gi|254781016|r 147 ESLSRVARLGSGSACRSFYRGFCEWICGTDQNGMDSFAVPFNNQ 190 (355)
Q Consensus 147 ~~lS~lARlGSGSA~RSi~GG~v~W~~g~~~~~sds~a~~~~~~ 190 (355)
++ |||+|||++|+|++||++.|..|..+++.+++++++...
T Consensus 163 ~e---La~l~~g~~~~~~~GG~~~~~~g~ge~~~~~~~~~~~~~ 203 (229)
T 3f0n_A 163 SE---VARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQIAPE 203 (229)
T ss_dssp HH---HHHHHCGGGGGGGSSSEEEECCCSCTTCTTCCEEEEECT
T ss_pred HH---HHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCEECCCC
T ss_conf 99---998607885310316645604678878876530334664
No 8
>>3lto_A Mevalonate diphosphate decarboxylase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.27A {Legionella pneumophila} (A:1-172)
Probab=99.88 E-value=6.3e-22 Score=173.21 Aligned_cols=153 Identities=36% Similarity=0.462 Sum_probs=129.7
Q ss_pred CEEEECCCCEEEEECCCCCCHHHCCCCCCCEEEEECCCCEEEEEEECCC---CCCEEEECCEECCCCC-HHHHHHHHHHH
Q ss_conf 3789748842488116776701175789843468127810799997178---8857998787256652-06899999974
Q gi|254781016|r 23 KSSAFLPSNIALCKYWGKRDSKLNLPLNNSLSLSLGHLGTITHITVIDS---DADCIILNGQKISSQS-SFFKKTTQFCD 98 (355)
Q Consensus 23 ~~ta~ap~NIALIKYWGK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~~---~~d~~~lnG~~~~~~~-~~~~ri~~~l~ 98 (355)
.+|++||.+|.|+|||||+++...+|..++|+++++...+.|..+.... ..|+++++|+.....+ .....+.+.++
T Consensus 2 ~~t~~Ap~kI~L~~~~g~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~n~v~~~~~ 81 (172)
T 3lto_A 2 HWFAQAPANIALIKYXGKKDENSNLPDNSSLSYTLSNLLSSVKLEKLPTKKDIWEPLTIPGAPEFNLSVEAQKRFIDHLV 81 (172)
T ss_dssp EEEEEEEEEEEEECCTTCBCTTTCCBSSCEEEEEEEEEEEEEEEEECSSSSCEECCBCTTSSBCCCCCSHHHHHHHHHHH
T ss_pred CCEEECCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH
T ss_conf 83537655478984046468777789998115683698457999972577741037898981412315799999999999
Q ss_pred HHHHHCC--CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC-----CCCHHHHHHHHHHCCCCCHHHHCCCCHHC
Q ss_conf 2167619--4399998502332110123224799999999998188-----99988999886521353034310562002
Q gi|254781016|r 99 LFRQFSK--VYFLIETSNNIPTKAGLASSASGFAALTLALFRIYSI-----PEKSESLSRVARLGSGSACRSFYRGFCEW 171 (355)
Q Consensus 99 ~~r~~~~--~~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~-----~~~~~~lS~lARlGSGSA~RSi~GG~v~W 171 (355)
.+++... ..+.|..++++|+++||+||||..+|+..|+++++++ ++...++..+++.+++++|||+||||+.|
T Consensus 82 ~~~~~~~~~~~~~i~i~~~iP~~~GLGSSaa~~~a~~~al~~l~~~~l~~~~l~~~~~~~~~~~~g~d~~~~~~GG~~~~ 161 (172)
T 3lto_A 82 RLKEYFGYVGGFLIQSSNNFPHSSGLASSASSFAALTKCASIALSELTQKPLPSIDEQAQLSRLGSGSSCRSFYAPWALW 161 (172)
T ss_dssp HHHHHHTCCCCEEEEEEESSCTTTTCCCHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHTTCGGGGGGGSCSEEEE
T ss_pred HHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHCCCEEEE
T ss_conf 99987699834999994588652343305678999999999997524015434789999998625998580220882799
Q ss_pred CCCC
Q ss_conf 5789
Q gi|254781016|r 172 ICGT 175 (355)
Q Consensus 172 ~~g~ 175 (355)
..+.
T Consensus 162 ~~~~ 165 (172)
T 3lto_A 162 TGDK 165 (172)
T ss_dssp ETTE
T ss_pred ECCC
T ss_conf 7488
No 9
>>2hke_A Diphosphomevalonate decarboxylase, putative; mevalonate diphosphate decarboxylase, lyase; 1.80A {Trypanosoma brucei} (A:1-178,A:365-380)
Probab=99.81 E-value=3.4e-18 Score=147.10 Aligned_cols=169 Identities=36% Similarity=0.593 Sum_probs=134.6
Q ss_pred CCEEEECCCCEEEEECCCCCCH--HHCCCCCCCEEEEECC--CCEEEEEEECCC-CCCEEEECCEECCCCCHHHHHHHHH
Q ss_conf 6378974884248811677670--1175789843468127--810799997178-8857998787256652068999999
Q gi|254781016|r 22 EKSSAFLPSNIALCKYWGKRDS--KLNLPLNNSLSLSLGH--LGTITHITVIDS-DADCIILNGQKISSQSSFFKKTTQF 96 (355)
Q Consensus 22 ~~~ta~ap~NIALIKYWGK~d~--~l~lP~n~SiS~TL~~--~~T~T~v~~~~~-~~d~~~lnG~~~~~~~~~~~ri~~~ 96 (355)
.+.+++||..|.|+.+|++++. .+..+.+.+++++++. .++.+.++..+. ..+++.+||+..+..+. ..+.++
T Consensus 4 ~~i~~~APgri~l~G~~~d~~~g~~~~~ai~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 81 (194)
T 2hke_A 4 QCVTVEAPINIAFIKYWGKREGGETLILPTNDSFSITLSASPFRSKTSVELRDDIETDTLRLNGTEVDVGKT--PRVQSM 81 (194)
T ss_dssp CEEEEEECCEEEEECCCCBCTTCTTTTCBSSCEEEEEBCSSSCCEEEEEEEESSCSSCEEEETTEEECGGGC--HHHHHH
T ss_pred CEEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCEEEECCEECCCCCC--HHHHHH
T ss_conf 619997325113543157778887775899980568965999868999998888886479999977874200--789999
Q ss_pred HHHHHHH-----CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCHHC
Q ss_conf 7421676-----19439999850233211012322479999999999818899988999886521353034310562002
Q gi|254781016|r 97 CDLFRQF-----SKVYFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARLGSGSACRSFYRGFCEW 171 (355)
Q Consensus 97 l~~~r~~-----~~~~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlGSGSA~RSi~GG~v~W 171 (355)
+..++.. ....++|+.++++|+++||+||||..+|++.|++++++++++.++ ++|+++|+.+++++||++.|
T Consensus 82 ~~~~~~~~~~~~~~~g~~i~i~s~IP~gsGLGSSaA~avA~~~al~~l~~~~l~~~e---la~l~~ga~~~~~~gG~~~~ 158 (194)
T 2hke_A 82 LLHLRSTCPEELKNKKVNIVSENNFPTAAGMASSASGYCAMSAALIRAFKSTTNVSM---LARLGSGSACRSAFGGFVIW 158 (194)
T ss_dssp HHHHHTSSCHHHHTCEEEEEEEECSCTTSCCCHHHHHHHHHHHHHHHHHTCSSCHHH---HHHHHCGGGGGGGSSSEEEE
T ss_pred HHHHHHHCHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH---HHHHCCCCCHHHCCCCEEEE
T ss_conf 999998552554156438997468710567898999999999999987404235569---98624754023304885674
Q ss_pred CCCCCCCCCCEEEEECCCCCCCCEEEE
Q ss_conf 578987654413101566686421589
Q gi|254781016|r 172 ICGTDQNGMDSFAVPFNNQWPDLRIGL 198 (355)
Q Consensus 172 ~~g~~~~~sds~a~~~~~~~~dl~~~i 198 (355)
..+..+...+.++++++ |++.+.+
T Consensus 159 ~~~~g~~~~~~~~~~lp---~~~~~~~ 182 (194)
T 2hke_A 159 NKGEKPDGSDCVATQFV---DETGCGV 182 (194)
T ss_dssp ECCSCTTSTTCEEEEEE---CTTCCCC
T ss_pred CCCCCCCCCCCCEEECC---CCCCCCC
T ss_conf 68899986320035346---6449998
No 10
>>2gs8_A Mevalonate pyrophosphate decarboxylase; structural genomics, PSI, protein structure initiative; HET: MSE; 1.50A {Streptococcus pyogenes m1 gas} (A:1-169)
Probab=99.79 E-value=2e-18 Score=148.75 Aligned_cols=158 Identities=30% Similarity=0.456 Sum_probs=140.9
Q ss_pred CCCCCCEEEECCCCEEEEECCCCCCHHHCCCCCCCEEEEECCCCEEEEEEECCC--CCCEEEECCEECCCCCHHHHHHHH
Q ss_conf 787763789748842488116776701175789843468127810799997178--885799878725665206899999
Q gi|254781016|r 18 PKINEKSSAFLPSNIALCKYWGKRDSKLNLPLNNSLSLSLGHLGTITHITVIDS--DADCIILNGQKISSQSSFFKKTTQ 95 (355)
Q Consensus 18 ~~~~~~~ta~ap~NIALIKYWGK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~~--~~d~~~lnG~~~~~~~~~~~ri~~ 95 (355)
+.-..+.+++||..|.|+.+|++++..+.+|.+.+++++++...+.+++...+. ..+.+..++++... .....+.+
T Consensus 3 ~~~~~~~~~~aP~ki~l~g~h~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~ 80 (169)
T 2gs8_A 3 AXDPNVITVTSYANIAIIKYWGKENQAKXIPSTSSISLTLENXFTTTSVSFLPDTATSDQFYINGILQND--EEHTKISA 80 (169)
T ss_dssp CSSCCEEEEEEEEEEEEECCCCEEETTTTEESSCEEEEEEEEEEEEEEEEECCTTCCSCEEEETTEECCH--HHHHHHHH
T ss_pred CCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCEEEEECCEECCH--HHHHHHHH
T ss_conf 7779818999515168785056367888867898675895789748899995488875289988866570--57788999
Q ss_pred HHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCHHCCCCC
Q ss_conf 97421676194399998502332110123224799999999998188999889998865213530343105620025789
Q gi|254781016|r 96 FCDLFRQFSKVYFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARLGSGSACRSFYRGFCEWICGT 175 (355)
Q Consensus 96 ~l~~~r~~~~~~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlGSGSA~RSi~GG~v~W~~g~ 175 (355)
.++.++......+.|+..+++|.++||+||||..+|++.|++++++++++..++..+|+.++++.+++++|||+.|..|.
T Consensus 81 ~~~~~~~~~~~g~~i~i~s~iP~~~GLGSSaa~~va~~~al~~~~~~~l~~~el~~ia~~~e~dv~~~~~Gg~~~~~~g~ 160 (169)
T 2gs8_A 81 IIDQFRQPGQAFVKXETQNNXPTAAGLSSSSSGLSALVKACDQLFDTQLDQKALAQKAKFASGSSSRSFFGPVAAWDKDS 160 (169)
T ss_dssp HHTTTCCTTCCCEEEEEECCSCGGGCCCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHGGGGGGGSCSEEEECTTT
T ss_pred HHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHCCCEEEEEECC
T ss_conf 88750123455227999746864100000367899999999998479999999999976147874711358849997079
Q ss_pred CC
Q ss_conf 87
Q gi|254781016|r 176 DQ 177 (355)
Q Consensus 176 ~~ 177 (355)
++
T Consensus 161 ~e 162 (169)
T 2gs8_A 161 GA 162 (169)
T ss_dssp CC
T ss_pred CC
T ss_conf 86
No 11
>>2hk2_A Diphosphomevalonate decarboxylase; mevalonate diphosphate decarboxylase, lyase; 2.30A {Staphylococcus aureus} PDB: 2hk3_A (A:1-175,A:323-331)
Probab=99.64 E-value=2e-14 Score=120.78 Aligned_cols=168 Identities=42% Similarity=0.617 Sum_probs=140.8
Q ss_pred CCCEEEECCCCEEEEECCCCCCHHHCCCCCCCEEEEECCCCEEEEEEECCC-CCCEEEECCEECCCCCHHHHHHHHHHHH
Q ss_conf 763789748842488116776701175789843468127810799997178-8857998787256652068999999742
Q gi|254781016|r 21 NEKSSAFLPSNIALCKYWGKRDSKLNLPLNNSLSLSLGHLGTITHITVIDS-DADCIILNGQKISSQSSFFKKTTQFCDL 99 (355)
Q Consensus 21 ~~~~ta~ap~NIALIKYWGK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~~-~~d~~~lnG~~~~~~~~~~~ri~~~l~~ 99 (355)
..+.+++||..|.|+..|+.+.....+|..-+..+|.+..++++.+...+. ..+.+.++.+...... ...+..+++.
T Consensus 6 ~~~i~~~aPgri~l~Geh~d~~g~~~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 83 (184)
T 2hk2_A 6 IKSGKARAHTNIALIKYWGKKDEALIIPMNNSISVTLEKFYTETKVTFNDQLTQDQFWLNGEKVSGKE--LEKISKYMDI 83 (184)
T ss_dssp CEEEEEEEEEEEEEECCCCEEETTTTEESSCEEEEEEEEEEEEEEEEEETTCCSCEEEETTEEECTHH--HHHHHHHHHH
T ss_pred CCCEEEECCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCCCCEEEECCEECCCHH--HHHHHHHHHH
T ss_conf 56229976762899852363576778989997868978880289999926888748999997589507--8899999998
Q ss_pred HHHHCC--CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCHHCCCCCCC
Q ss_conf 167619--439999850233211012322479999999999818899988999886521353034310562002578987
Q gi|254781016|r 100 FRQFSK--VYFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARLGSGSACRSFYRGFCEWICGTDQ 177 (355)
Q Consensus 100 ~r~~~~--~~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlGSGSA~RSi~GG~v~W~~g~~~ 177 (355)
+++..+ ..+.|....++|.++||+||||..+|++.|++++++.+++.+++..+|+.+.+..+.+++|||+.+..|..+
T Consensus 84 ~~~~~~~~~~~~i~i~s~iP~gsGLGSSaA~~va~~~al~~~~~~~ls~~el~~~a~~~E~dv~~~~~Gg~~~~~~g~~d 163 (184)
T 2hk2_A 84 VRNRAGIDWYAEIESDNFVPTAAGLASSASAYAALAAACNQALDMQLSDKDLSRLARIGSGSASRSIYGGFAEWEKGYSD 163 (184)
T ss_dssp HHHHHTCCCEEEEEEEEESCGGGTCCCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTCGGGGGGGSSSEEEEECCSST
T ss_pred HHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCEEEEECCCCC
T ss_conf 89860898618999954404555478999999999999876630478778999998753578784057877788436887
Q ss_pred CCCCEEEEECCCCCC
Q ss_conf 654413101566686
Q gi|254781016|r 178 NGMDSFAVPFNNQWP 192 (355)
Q Consensus 178 ~~sds~a~~~~~~~~ 192 (355)
.-.. ..+.+++|-
T Consensus 164 ~~~~--~~~~~~~~~ 176 (184)
T 2hk2_A 164 ETSY--AVPLESNHI 176 (184)
T ss_dssp TTCE--EEECCCTTC
T ss_pred CCCE--EECCCCCCC
T ss_conf 6640--112234568
No 12
>>1h72_C HK, homoserine kinase; transferase, threonine biosynthesis; HET: ANP; 1.8A {Methanococcus jannaschii} (C:1-164,C:290-296)
Probab=99.33 E-value=2.7e-11 Score=98.94 Aligned_cols=138 Identities=16% Similarity=0.132 Sum_probs=109.0
Q ss_pred CEEEECCCCEEEEECCCCCCHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCEEEECCEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 37897488424881167767011757898434681278107999971788857998787256652068999999742167
Q gi|254781016|r 23 KSSAFLPSNIALCKYWGKRDSKLNLPLNNSLSLSLGHLGTITHITVIDSDADCIILNGQKISSQSSFFKKTTQFCDLFRQ 102 (355)
Q Consensus 23 ~~ta~ap~NIALIKYWGK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~~~~d~~~lnG~~~~~~~~~~~ri~~~l~~~r~ 102 (355)
+.+++||-.|.| .-+....+++.++..+++.+++..+.....+...+...+.... ...+.+.++.+.+
T Consensus 2 ki~~~aPgri~l-----------~G~~~~v~~~ai~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ 69 (171)
T 1h72_C 2 KVRVKAPCTSAN-----------LGVGFDVFGLCLKEPYDVIEVEAIDDKEIIIEVDDKNIPTDPD-KNVAGIVAKKMID 69 (171)
T ss_dssp EEEEEEEEEEEC-----------TGGGTTTEEEEEEEEEEEEEEEEESSSSEEEEESCTTSCCCTT-TSHHHHHHHHHHH
T ss_pred EEEEEEEEEHHH-----------CCCCCCEEEECCCCCCEEEEEEECCCCCEEEEECCCCCCCCHH-HHHHHHHHHHHHH
T ss_conf 799999830775-----------6888352544004583699999989996899978888988723-4389999999998
Q ss_pred HCC--CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH------CCCC---CHHHHCCCCHHC
Q ss_conf 619--43999985023321101232247999999999981889998899988652------1353---034310562002
Q gi|254781016|r 103 FSK--VYFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARL------GSGS---ACRSFYRGFCEW 171 (355)
Q Consensus 103 ~~~--~~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARl------GSGS---A~RSi~GG~v~W 171 (355)
..+ ..+.|..++++|.++||+||||..+|++.|++++++.+++.+++..+|+. |.|| .+.++|||++.-
T Consensus 70 ~~~~~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~g~~l~~~~l~~la~~~E~~~~g~~~g~D~~~~~~GG~~~~ 149 (171)
T 1h72_C 70 DFNIGKGVKITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLKLVDYASYGELASSGAKHADNVAPAIFGGFTMV 149 (171)
T ss_dssp HTTCCCEEEEEEECSSCTTSSSCHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHSSCCCTTHHHHHHCSEEEE
T ss_pred HCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCC
T ss_conf 51899977999995468744646217899999999999848998989999999987665523554455622885475410
Q ss_pred C
Q ss_conf 5
Q gi|254781016|r 172 I 172 (355)
Q Consensus 172 ~ 172 (355)
.
T Consensus 150 ~ 150 (171)
T 1h72_C 150 T 150 (171)
T ss_dssp E
T ss_pred C
T ss_conf 2
No 13
>>3hul_A HSK, HK, homoserine kinase; structural genomics, putative homoserine kinase, THRB, amino-acid biosynthesis, ATP-binding, cytoplasm; 2.19A {Listeria monocytogenes} (A:1-154,A:284-298)
Probab=99.07 E-value=1.4e-09 Score=86.97 Aligned_cols=134 Identities=16% Similarity=0.015 Sum_probs=93.3
Q ss_pred CEEEECCCCEEEEECCCCCCHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCEEEECCEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 37897488424881167767011757898434681278107999971788857998787256652068999999742167
Q gi|254781016|r 23 KSSAFLPSNIALCKYWGKRDSKLNLPLNNSLSLSLGHLGTITHITVIDSDADCIILNGQKISSQSSFFKKTTQFCDLFRQ 102 (355)
Q Consensus 23 ~~ta~ap~NIALIKYWGK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~~~~d~~~lnG~~~~~~~~~~~ri~~~l~~~r~ 102 (355)
+.+++||.-|. +.-+-..+|++.+| .+++.+++..+.....+.-++....... .+.+.+.++.+..
T Consensus 2 ~i~~~aPgri~-----------l~g~~~~~l~~aId-~~~~~~i~~~~~~~i~~~~~~~~~~~~~--~~~v~~~~~~~~~ 67 (169)
T 3hul_A 2 SLRIRVPATTA-----------NLGPGFDSCGLALT-LYLTLDIGAEADSWYIEHNIGGGIPHDE--TNVIIETALNLAP 67 (169)
T ss_dssp CEEEEEEEEEE-----------SCTTCTTTEEEEEE-EEEEEEEEEECSSCEEECCCCTTCCSST--TSHHHHHHHHHCT
T ss_pred EEEEEEECCHH-----------HCCCCHHHHEEEEE-CCEEEEEEECCCCEEEEECCCCCCCCCC--CHHHHHHHHHHHC
T ss_conf 79999714456-----------43558456056221-7769999984895599826766799985--0059999998745
Q ss_pred HCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC---CHHHHCCCCHHC
Q ss_conf 619439999850233211012322479999999999818899988999886521353---034310562002
Q gi|254781016|r 103 FSKVYFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARLGSGS---ACRSFYRGFCEW 171 (355)
Q Consensus 103 ~~~~~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlGSGS---A~RSi~GG~v~W 171 (355)
.. ..++|+.+.++|.++||+||||..+|++.|++++++++++.+++..+|..+.++ .+-+++||++.-
T Consensus 68 ~~-~g~~i~i~s~IP~~~GLgSSsA~~va~~~al~~~~~~~l~~~~la~la~~~E~~~~g~~~~~~gg~~~~ 138 (169)
T 3hul_A 68 NL-TPHHLVMTCDIPPARGLGSSSAAVVAGIELANTLAELNLSKEEKVRIAAEIEGHPDNVAPAVLGNWVVG 138 (169)
T ss_dssp TC-CCEEEEEEECSCTTSSSSHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHSCSTTHHHHHHCSEEEE
T ss_pred CC-CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCEEE
T ss_conf 57-982799962787656778348999999999999737442205789875420346887614786473699
No 14
>>1oj4_A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; transferase, isoprenoids biosynthesis, GHMP kinase superfamily transferase; HET: MSE CDM ANP; 2.01A {Escherichia coli} (A:)
Probab=99.05 E-value=2.5e-09 Score=85.09 Aligned_cols=145 Identities=14% Similarity=0.078 Sum_probs=94.0
Q ss_pred CEEEECCCCEEEEECC-CCCCHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCEEEECCEECCCCC--HHHHHHHHHH--
Q ss_conf 3789748842488116-7767011757898434681278107999971788857998787256652--0689999997--
Q gi|254781016|r 23 KSSAFLPSNIALCKYW-GKRDSKLNLPLNNSLSLSLGHLGTITHITVIDSDADCIILNGQKISSQS--SFFKKTTQFC-- 97 (355)
Q Consensus 23 ~~ta~ap~NIALIKYW-GK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~~~~d~~~lnG~~~~~~~--~~~~ri~~~l-- 97 (355)
|.+++||-+|-|=-.+ |++-....-| .++.+.+ +.+++.+++ +.+...+.+.+....... ....+....+
T Consensus 2 ki~v~aPaki~L~l~~~Ge~~d~y~~~--~v~~~ai-~~~~~i~v~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (283)
T 1oj4_A 2 RTQWPSPAKLNLFLYITGQRADGYHTL--QTLFQFL-DYGDTISIE--LRDDGDIRLLTPVEGVEHEDNLIVRAARLLXK 76 (283)
T ss_dssp EEEEEEEEEEEEEEEEEEECTTSCEEE--EEEEEEE-EEEEEEEEE--EESSSCEEECSCBTTBCGGGSHHHHHHHHHHH
T ss_pred CCCCCCCEEEECCEEECCCCCCCCCEE--EEEEEEE-CCCEEEEEE--ECCCCCEEEEECCCCCCCCCCHHHHHHHHHHH
T ss_conf 836487005701535378699997324--8899983-787199999--98999889971766677531389999998798
Q ss_pred -HHHHHHC--CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCHHCC
Q ss_conf -4216761--94399998502332110123224799999999998188999889998865213530343105620025
Q gi|254781016|r 98 -DLFRQFS--KVYFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARLGSGSACRSFYRGFCEWI 172 (355)
Q Consensus 98 -~~~r~~~--~~~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlGSGSA~RSi~GG~v~W~ 172 (355)
..++... ...+.|...+++|.++||+||||..+|+..|++++++.+++.+++..+|....-...-++.|+++...
T Consensus 77 ~~~~~~~~~~~~g~~i~i~s~IP~~~GLGSSsA~ava~~~al~~~~~~~l~~~el~~~a~~~~~~v~~~~~~~~~~~~ 154 (283)
T 1oj4_A 77 TAADSGRLPTGSGANISIDKRLPXGGGLGGGSSNAATVLVALNHLWQCGLSXDELAEXGLTLGADVPVFVRGHAAFAE 154 (283)
T ss_dssp HHHHTTCSCTTCEEEEEEECCSCSSTTSCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHGGGCTTHHHHHHCBCEEEE
T ss_pred HHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCEEEC
T ss_conf 754444315688459999568875455665368999999754420124621899999875206886215348625642
No 15
>>1fi4_A Mevalonate 5-diphosphate decarboxylase; mixed alpha/beta structure, ATP binding, cholesterol biosynthesis, structural genomics, PSI; 2.27A {Saccharomyces cerevisiae} (A:1-31,A:62-178,A:398-416)
Probab=99.02 E-value=3.2e-09 Score=84.40 Aligned_cols=121 Identities=35% Similarity=0.454 Sum_probs=89.0
Q ss_pred EEEEC-CCCEEEEEEECCC-CCCEEEECCEECCCCCHHHHH--------HHHHHHHHHHH---CCCEEEEEEECCCCCCC
Q ss_conf 46812-7810799997178-885799878725665206899--------99997421676---19439999850233211
Q gi|254781016|r 54 SLSLG-HLGTITHITVIDS-DADCIILNGQKISSQSSFFKK--------TTQFCDLFRQF---SKVYFLIETSNNIPTKA 120 (355)
Q Consensus 54 S~TL~-~~~T~T~v~~~~~-~~d~~~lnG~~~~~~~~~~~r--------i~~~l~~~r~~---~~~~~~I~S~N~fPtaa 120 (355)
|+|-- +++++++++..+. ....+.+|+...........+ +.+.+..+... ....++|...+++|.++
T Consensus 27 ~~~~~idl~~~vti~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~I~i~s~IP~g~ 106 (167)
T 1fi4_A 27 SVTAPDDLRTLTSAATAPEFERDTLWLNGEPHSIDNERTQNCLRDLRQLRKEXESKDASLPTLSQWKLHIVSENNFPTAA 106 (167)
T ss_dssp EEEECTTSCEEEEEEECTTCCSCBCTTTCCBSSSSSSSHHHHHHHHHHHHHHHHTTCTTSCCGGGSCEEEEEEECCCTTS
T ss_pred EEECCCCCEEEEEEEECCCCCCCEEEECCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHH
T ss_conf 99750897789999978887664599899735652067888999999999887543342343447318999707872055
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCHHCCCC
Q ss_conf 012322479999999999818899988999886521353034310562002578
Q gi|254781016|r 121 GLASSASGFAALTLALFRIYSIPEKSESLSRVARLGSGSACRSFYRGFCEWICG 174 (355)
Q Consensus 121 GLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlGSGSA~RSi~GG~v~W~~g 174 (355)
||+|||+..+|++.|++++++++++.+++..+|+.+......++.||++.+-.+
T Consensus 107 GLGSSAA~~VA~~~Al~~~~g~~Ls~~eLa~la~~~E~~v~g~~~G~~d~~a~~ 160 (167)
T 1fi4_A 107 GLASSAAGFAALVSAIAKLYQLPQSTSEISRIARKGSGSACRGPQETNESLIDA 160 (167)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHGGGGGCCEECSCCSSCS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHCCCCCCHHHCCC
T ss_conf 677779999999987778644689989999996526714265987630640378
No 16
>>2v8p_A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; nucleotide-binding, isoprene biosynthesis, transferase, ATP-binding, non-mevalonate; HET: CDP ADP; 2.1A {Aquifex aeolicus} PDB: 2v2v_A* 2v2q_A* 2v34_A* 2v2z_A* 2vf3_A* (A:1-158)
Probab=99.01 E-value=1e-08 Score=80.81 Aligned_cols=142 Identities=17% Similarity=0.134 Sum_probs=96.8
Q ss_pred CCEEEECCCCEEEEE-CCCCCCHHHCCCCCC--CEEEEECCCCEEEEEEECCCCCCEEEECCEECCCCCHHHHHHHHHHH
Q ss_conf 637897488424881-167767011757898--43468127810799997178885799878725665206899999974
Q gi|254781016|r 22 EKSSAFLPSNIALCK-YWGKRDSKLNLPLNN--SLSLSLGHLGTITHITVIDSDADCIILNGQKISSQSSFFKKTTQFCD 98 (355)
Q Consensus 22 ~~~ta~ap~NIALIK-YWGK~d~~l~lP~n~--SiS~TL~~~~T~T~v~~~~~~~d~~~lnG~~~~~~~~~~~ri~~~l~ 98 (355)
...+++||.||-|=- -.|.+... .+. ++.+++ +. .+.+++.+..++.+.+.+... .. ..+.+.++
T Consensus 3 ~~i~~~aPari~l~~~~~g~~~~~----~~~~~~~~~~i-~~--~~~~~v~~~~~~~~~~~~~~~--~~---~~~~~~~~ 70 (158)
T 2v8p_A 3 HMIKVLSPAKINLGLWVLGRLPSG----YHEILTLYQEI-PF--YDEIYIREGVLRVETNIGIPQ--EE---NLVYKGLR 70 (158)
T ss_dssp CCEEEEEEEEEEEEEEEEEECTTS----CEEEEEEEEEE-EE--EEEEEEEESSCEEEESSCCCT--TT---CHHHHHHH
T ss_pred CEEEEEEEEEEEEEEEECCCCCCC----CCEEEEEEEEE-CC--CEEEEEEECCCEEECCCCCCC--HH---HHHHHHHH
T ss_conf 529998537898446627848999----85368999980-78--619999958856657889881--34---46788877
Q ss_pred HHHHHCC--CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCHH-CCCCC
Q ss_conf 2167619--43999985023321101232247999999999981889998899988652135303431056200-25789
Q gi|254781016|r 99 LFRQFSK--VYFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARLGSGSACRSFYRGFCE-WICGT 175 (355)
Q Consensus 99 ~~r~~~~--~~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlGSGSA~RSi~GG~v~-W~~g~ 175 (355)
.+++..+ ..++|+.+.++|.++||+||||..+|+..|++++++++++.+++..+|+.+--...-+++||++. |+.|.
T Consensus 71 ~l~~~~~~~~~~~i~i~s~IP~g~GLGSSsA~~va~~~al~~~~~~~ls~~el~~ia~~~e~~v~~~~~~~~~~~~g~g~ 150 (158)
T 2v8p_A 71 EFERITGIEINYSIFIQKNIPPGAGLGGGSSNLAVVLKKVNELLGSPLSEEELRELVGSISADAPFFLLGKSAIGRGKGE 150 (158)
T ss_dssp HHHHHHCCCCCEEEEEECCSCTTSSSCHHHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHCTTTGGGGTCSEEEEETTTT
T ss_pred HHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC
T ss_conf 65420232136788775075323555777403789999866412654233322011234566687523574133238743
No 17
>>2oi2_A Mevalonate kinase; enzyme-inhibitor complex, transferase; HET: DP6; 2.50A {Streptococcus pneumoniae} (A:1-159)
Probab=98.90 E-value=3.6e-08 Score=77.06 Aligned_cols=140 Identities=18% Similarity=0.152 Sum_probs=94.6
Q ss_pred CCEEEECCCCEEEEECCCCCCHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCEEEECCEECCCCCHHHHHHHHHHHHHH
Q ss_conf 63789748842488116776701175789843468127810799997178885799878725665206899999974216
Q gi|254781016|r 22 EKSSAFLPSNIALCKYWGKRDSKLNLPLNNSLSLSLGHLGTITHITVIDSDADCIILNGQKISSQSSFFKKTTQFCDLFR 101 (355)
Q Consensus 22 ~~~ta~ap~NIALIKYWGK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~~~~d~~~lnG~~~~~~~~~~~ri~~~l~~~r 101 (355)
.+.+++||-.|.|+ |.+-. .=-.+-++++++.....+.+...+ .+ ... +......+.+..+++...
T Consensus 4 ~~~~~~aPgki~l~---G~~~d---~~g~~~~~~~i~~~~~~~~~~~~~--~~-~~~-----~~~~~~~~~~~~~l~~~~ 69 (159)
T 2oi2_A 4 KVGVGQAHSKIILI---GEHAV---VYGYPAISLPLLEVEVTCKVVPAE--SP-WRL-----YEEDTLSMAVYASLEYLN 69 (159)
T ss_dssp CCEEEEEEEEEEEE---CTTGG---GGTCCEEEEEEEEEEEEEEEEECS--SC-CCC-----CCCSHHHHHHHHHHHHHT
T ss_pred CCEEEEEEEEEEEE---EECEE---CCCCEEEEEEECEEEEEEEEEECC--CC-CEE-----CCCCCHHHHHHHHHHHCC
T ss_conf 23299962189999---50612---269808996875239999999768--87-422-----156632478999999739
Q ss_pred HHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH--------CCC-CCHHHHCCCCHHCC
Q ss_conf 761943999985023321101232247999999999981889998899988652--------135-30343105620025
Q gi|254781016|r 102 QFSKVYFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARL--------GSG-SACRSFYRGFCEWI 172 (355)
Q Consensus 102 ~~~~~~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARl--------GSG-SA~RSi~GG~v~W~ 172 (355)
. ....+.|....+.|.++||+||||..+|++.|++++++++++.+++..+|+. +|| -.+-|++||++.+.
T Consensus 70 ~-~~~~~~i~i~s~iP~g~GlgSSaA~~va~~~al~~~~~~~l~~~~l~~la~~~E~~~~g~~~G~D~~~~~~Gg~v~~~ 148 (159)
T 2oi2_A 70 I-TEACIRCEIDSAIPEKRGMGSSAAISIAAIRAVFDYYQADLPHDVLEILVNRAEMIAHMNPSGLDAKTCLSDQPIRFI 148 (159)
T ss_dssp C-SCCCEEEEEC----CCGGGSCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHTTCCCCSHHHHHHTCSSCEEEE
T ss_pred C-CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEE
T ss_conf 9-888879999347842158773668999998876654430289889999888777653268876675068837827874
Q ss_pred CCCC
Q ss_conf 7898
Q gi|254781016|r 173 CGTD 176 (355)
Q Consensus 173 ~g~~ 176 (355)
.+.+
T Consensus 149 ~~~~ 152 (159)
T 2oi2_A 149 KNVG 152 (159)
T ss_dssp TTTE
T ss_pred CCCC
T ss_conf 1464
No 18
>>1kkh_A Mevalonate kinase; mixed beta sheet, phosphate-binding loop, beta-alpha-beta, transferase; 2.40A {Methanocaldococcus jannaschii} (A:1-181)
Probab=98.85 E-value=2.9e-08 Score=77.70 Aligned_cols=144 Identities=22% Similarity=0.219 Sum_probs=88.3
Q ss_pred CCCEEEECCCCEEEEE----CCCCCCHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCEEEEC-----------CEECCC
Q ss_conf 7637897488424881----1677670117578984346812781079999717888579987-----------872566
Q gi|254781016|r 21 NEKSSAFLPSNIALCK----YWGKRDSKLNLPLNNSLSLSLGHLGTITHITVIDSDADCIILN-----------GQKISS 85 (355)
Q Consensus 21 ~~~~ta~ap~NIALIK----YWGK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~~~~d~~~ln-----------G~~~~~ 85 (355)
..+.+++||-.|.|+= |+|. ..|+++++. ++..+++..+..+-++..+ +.....
T Consensus 3 ~~~~~~~aPgki~l~Ge~~d~~g~----------~~l~~ai~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 71 (181)
T 1kkh_A 3 GSHMIIETPSKVILFGEHAVVYGY----------RAISMAIDL-TSTIEIKETQEDEIILNLNDLNKSLGLNLNEIKNIN 71 (181)
T ss_dssp TCCEEEEEEEEEEEECTTGGGGTC----------CEEEEEEEE-EEEEEEEECCSSEEEEEETTTTEEEEEETTTGGGCC
T ss_pred CCEEEEEEEEEEEEECCCEEECCC----------CEEEEEECC-EEEEEEEECCCCEEEEEECCCCCCEEEEHHHCCCCC
T ss_conf 981999923499998068034699----------789999516-299999998898699997478862688501133358
Q ss_pred ---CCHHHHHHHHHHHHH-HHH--CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC---
Q ss_conf ---520689999997421-676--19439999850233211012322479999999999818899988999886521---
Q gi|254781016|r 86 ---QSSFFKKTTQFCDLF-RQF--SKVYFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARLG--- 156 (355)
Q Consensus 86 ---~~~~~~ri~~~l~~~-r~~--~~~~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlG--- 156 (355)
......-+...+..+ +.. ....+.|...+++|.++||+||||..+|++.|++++++++++.+++..+|..+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~i~s~iP~~~GLGSSaa~~va~~~al~~~~~~~~s~~~l~~~a~~~E~~ 151 (181)
T 1kkh_A 72 PNNFGDFKYCLCAIKNTLDYLNIEPKTGFKINISSKIPISCGLGSSASITIGTIKAVSGFYNKELKDDEIAKLGYMVEKE 151 (181)
T ss_dssp GGGSGGGHHHHHHHHHHHHHTTCCCCSCEEEEEEECSCSSSSSCHHHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
T ss_conf 55443389999999999998288889877999967798877764568999999988666521479999997766888851
Q ss_pred -CCCC-----HHHHCCCCHHCCCCC
Q ss_conf -3530-----343105620025789
Q gi|254781016|r 157 -SGSA-----CRSFYRGFCEWICGT 175 (355)
Q Consensus 157 -SGSA-----~RSi~GG~v~W~~g~ 175 (355)
.|.+ +-|+|||++.+..+.
T Consensus 152 ~~g~~~g~D~~~~~~gg~~~~~~~~ 176 (181)
T 1kkh_A 152 IQGKASITDTSTITYKGILEIKNNK 176 (181)
T ss_dssp HSSSCCSHHHHHHHHCSEEEESSSC
T ss_pred CCCCCCCCCHHHHHCCCEEEEECCC
T ss_conf 4878786543554158659963685
No 19
>>3k85_A D-glycero-D-manno-heptose 1-phosphate kinase; bacteriodes thetaiotaomicron, protein structure initiative II(PSI II), nysgxrc; 2.28A {Bacteroides thetaiotaomicron} (A:1-187,A:332-357)
Probab=98.74 E-value=1.2e-07 Score=73.40 Aligned_cols=162 Identities=15% Similarity=0.107 Sum_probs=93.6
Q ss_pred CEEEECCCCEEEEECCCCCCHHHCCCCCCCEEEEECCCCEEEEEEECCCCC----------CEEEECCEECCCCCHHHHH
Q ss_conf 378974884248811677670117578984346812781079999717888----------5799878725665206899
Q gi|254781016|r 23 KSSAFLPSNIALCKYWGKRDSKLNLPLNNSLSLSLGHLGTITHITVIDSDA----------DCIILNGQKISSQSSFFKK 92 (355)
Q Consensus 23 ~~ta~ap~NIALIKYWGK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~~~~----------d~~~lnG~~~~~~~~~~~r 92 (355)
-.+++||..|.|+-=|=-..+.--..-.+.|.+++| .+++.+++..++.+ .....+..+...... ..-
T Consensus 3 mi~v~aPgri~L~Geh~D~~~~~~~~g~~~l~~aId-~~~~v~i~~~~~~~i~i~s~~~~~~~~~~~~~~~~~~~~-~~~ 80 (213)
T 3k85_A 3 LVRSKAPLRLGLAGGGSDVSPYSDIYGGLILNATIN-LYAYCTIEETNSGRIEINAYDAQCCKSYLSXSQLEIDGE-ASL 80 (213)
T ss_dssp CEEEEEEEEEEEECTTTTSTTHHHHTCEEEEEEEEE-EEEEEEEEECSSSEEEEEETTTTEEEEEECCSSCCCCSS-SHH
T ss_pred EEEEECCEEEEEECCCCCCCHHHCCCCCEEEEEEEC-CCEEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCH-HHH
T ss_conf 999989997898707636811334489799999986-818999999999969999658885169812431234660-678
Q ss_pred HHHHHHHHHHHC---CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH------C--CC--C
Q ss_conf 999974216761---943999985023321101232247999999999981889998899988652------1--35--3
Q gi|254781016|r 93 TTQFCDLFRQFS---KVYFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARL------G--SG--S 159 (355)
Q Consensus 93 i~~~l~~~r~~~---~~~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARl------G--SG--S 159 (355)
+...+..+.... ...+.|....+.|.++||+||||..+|++.|+++++++.++.+++..+|+. | || .
T Consensus 81 ~~~~~~~l~~~~~~~~~g~~i~i~s~IP~g~GLGSSaA~~vA~~~al~~~~g~~ls~~~l~~~a~~~E~~~~g~~sG~~D 160 (213)
T 3k85_A 81 IKGVYNRIIRDYRLEPKSFKITTYNDAPAGSGLGTSSTXVVCILKAFIEWLSLPLGDYETSRLAYEIERKDLGLSGGKQD 160 (213)
T ss_dssp HHHHHHHHHHHTTCCCCCEEEEEEESSCSSSSSCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHTTTCCCCCSHH
T ss_pred HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 99999999997278898759999657868889884068889889998865545115388999999876654289877654
Q ss_pred CHHHHCCCCHHCCCCCCCCCCCEEEEEC
Q ss_conf 0343105620025789876544131015
Q gi|254781016|r 160 ACRSFYRGFCEWICGTDQNGMDSFAVPF 187 (355)
Q Consensus 160 A~RSi~GG~v~W~~g~~~~~sds~a~~~ 187 (355)
.+-++|||++.+..- +....+...+|.
T Consensus 161 ~~a~~~Gg~~~~~~~-d~~~l~~~~ip~ 187 (213)
T 3k85_A 161 QYAAAFGGFNYXEFL-QNDLVIVNPLKX 187 (213)
T ss_dssp HHHHHHCSEEEEEEE-TTTEEEEEEECC
T ss_pred CHHHCCCCCCEEEEC-CCCCEEECCCCC
T ss_conf 064516762157740-588437711232
No 20
>>2hfs_A Mevalonate kinase, putative; GHMP kinase, trypanosomatid parasite, transferase; 1.75A {Leishmania major} PDB: 2hfu_A* (A:1-184)
Probab=98.73 E-value=3.6e-07 Score=70.03 Aligned_cols=146 Identities=14% Similarity=0.099 Sum_probs=99.5
Q ss_pred CCCCEEEECCCCEEEEECCCCCCHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCEEEE-CCEECCC-CCH---HHHHHH
Q ss_conf 77637897488424881167767011757898434681278107999971788857998-7872566-520---689999
Q gi|254781016|r 20 INEKSSAFLPSNIALCKYWGKRDSKLNLPLNNSLSLSLGHLGTITHITVIDSDADCIIL-NGQKISS-QSS---FFKKTT 94 (355)
Q Consensus 20 ~~~~~ta~ap~NIALIKYWGK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~~~~d~~~l-nG~~~~~-~~~---~~~ri~ 94 (355)
.....+++||-.|.|+- .+ ..++-.++|+++++ .++..++...+.....+.. +...... ... ...++.
T Consensus 10 ~~~~~~~~aPgki~l~G---e~---~d~~g~~~l~~ai~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (184)
T 2hfs_A 10 SKTTGKNIGYGKVILFG---EH---FVVHGAEAIVAGIS-EYTECRLEINPGVPGLQVDDQRPAIPGYIAQKRDEQIKAH 82 (184)
T ss_dssp SBCCSCCEEEEEEEEEC---TT---GGGGTCCEEEEEEE-EEEEEEEEEETTCCSEEEEECCCCCTTHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEEEEEEE---CC---HHHCCCCEEEEEEC-CCEEEEEEECCCCCCEEEECCCCCCCCCCCCCCHHHHHHH
T ss_conf 66578347606999993---45---64459867999941-7169999986899856874456567541001341566899
Q ss_pred HHHHHHHHHC--CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC--------CC-CCHHH
Q ss_conf 9974216761--9439999850233211012322479999999999818899988999886521--------35-30343
Q gi|254781016|r 95 QFCDLFRQFS--KVYFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARLG--------SG-SACRS 163 (355)
Q Consensus 95 ~~l~~~r~~~--~~~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlG--------SG-SA~RS 163 (355)
.++....... ...+.+....+.|.++||+||||..+|++.|++++++++++..++..+|+.+ || ..+-|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~i~s~iP~~~GlgSSaA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~g~~sG~D~~~~ 162 (184)
T 2hfs_A 83 QLVLDHLKVDLSGDGLKXFIGGPLVPSSGIGASASDVVAFSRALSELYQLNLTDEEVNLSAFVGEGGYHGTPSGADNTAA 162 (184)
T ss_dssp HHHHHHTTBCCSSSEEEEEEECSCCCCTTSCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHGGGSSSCCCSHHHHHH
T ss_pred HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
T ss_conf 99999975228999879999058850014566640478898887642233333578999978875421047862411787
Q ss_pred HCCCCHHCC
Q ss_conf 105620025
Q gi|254781016|r 164 FYRGFCEWI 172 (355)
Q Consensus 164 i~GG~v~W~ 172 (355)
++||++.-.
T Consensus 163 ~~Gg~~~~~ 171 (184)
T 2hfs_A 163 TYGGLILYR 171 (184)
T ss_dssp HHCEEEEEE
T ss_pred HCCCEEEEE
T ss_conf 569649999
No 21
>>2a2c_A N-acetylgalactosamine kinase; galactokinase, , transferase; HET: NG1 ADP; 1.65A {Homo sapiens} PDB: 2a2d_A* (A:1-238,A:468-478)
Probab=98.64 E-value=4.7e-07 Score=69.26 Aligned_cols=143 Identities=13% Similarity=0.084 Sum_probs=89.8
Q ss_pred CCCCEEEECCCCEEEEE----CCCCCCHHHCCCCCCCEEEEECCCCEEEEEEECCC------------CCCEEEECCEEC
Q ss_conf 77637897488424881----16776701175789843468127810799997178------------885799878725
Q gi|254781016|r 20 INEKSSAFLPSNIALCK----YWGKRDSKLNLPLNNSLSLSLGHLGTITHITVIDS------------DADCIILNGQKI 83 (355)
Q Consensus 20 ~~~~~ta~ap~NIALIK----YWGK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~~------------~~d~~~lnG~~~ 83 (355)
.....+++||-.|-|+- |+|.. .|.+.++ .++...+...++ ..+.+.+++...
T Consensus 52 ~~~~~~~~APgri~L~Geh~d~~gg~----------vl~~ai~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 120 (249)
T 2a2c_A 52 SIPKFYVRAPGRVNIIGEHIDYCGYS----------VLPMAVE-QDVLIAVEPVKTYALQLANTNPLYPDFSTSANNIQI 120 (249)
T ss_dssp SCCSEEEEEEEEEEEECTTCGGGTCC----------BEEEEEE-EEEEEEEEECSSSCEEEEESSTTSCCEEECCCCC--
T ss_pred CCCCEEEECCEEEEEECCCCCCCCCE----------EEEEEHH-HCEEEEEEECCCCEEEEEECCCCCCCEEECCCCCCC
T ss_conf 99859998980589656875159972----------7925960-378999999889879999788887613300101466
Q ss_pred CCCC-HHHHHHHHHHHHHHHHC----CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH---
Q ss_conf 6652-06899999974216761----943999985023321101232247999999999981889998899988652---
Q gi|254781016|r 84 SSQS-SFFKKTTQFCDLFRQFS----KVYFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARL--- 155 (355)
Q Consensus 84 ~~~~-~~~~ri~~~l~~~r~~~----~~~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARl--- 155 (355)
.... .....+...+..+.... ...+.|...+++|.++||+||||..+|++.|++++++++++.+++..+|..
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~~s~~~l~~la~~~E~ 200 (249)
T 2a2c_A 121 DKTKPLWHNYFLCGLKGIQEHFGLSNLTGMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGRNLSKVELAEICAKSER 200 (249)
T ss_dssp CCSSCCHHHHHHHHHHHHHHHTTCCSCCCEEEEEEECSCTTSSSCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHG
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 65565478899999999999809988885699996552124544452689999999999841541356788898887765
Q ss_pred ---CCC---CCHHHHCCCCHHCCC
Q ss_conf ---135---303431056200257
Q gi|254781016|r 156 ---GSG---SACRSFYRGFCEWIC 173 (355)
Q Consensus 156 ---GSG---SA~RSi~GG~v~W~~ 173 (355)
|.| .+.-++|||++.-..
T Consensus 201 ~~~~~~s~~D~~~~~~Gg~~~~~~ 224 (249)
T 2a2c_A 201 YIGTEGGGMDQSISFLAEEGTAKL 224 (249)
T ss_dssp GGTCCCCSHHHHHHHHCBTTBEEE
T ss_pred HCCCCCCCCHHHHHHCCCCCEEEE
T ss_conf 147776450566652266768998
No 22
>>1uek_A 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase; non-mevalonate pathway, GHMP superfamily; 1.70A {Thermus thermophilus} (A:1-148)
Probab=98.58 E-value=4.9e-07 Score=69.11 Aligned_cols=136 Identities=17% Similarity=0.118 Sum_probs=87.0
Q ss_pred EEECCCCEEE-EECCCCCCHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCEEEECCEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 8974884248-811677670117578984346812781079999717888579987872566520689999997421676
Q gi|254781016|r 25 SAFLPSNIAL-CKYWGKRDSKLNLPLNNSLSLSLGHLGTITHITVIDSDADCIILNGQKISSQSSFFKKTTQFCDLFRQF 103 (355)
Q Consensus 25 ta~ap~NIAL-IKYWGK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~~~~d~~~lnG~~~~~~~~~~~ri~~~l~~~r~~ 103 (355)
+++||..|.| ..-.|++-. ....-..-+..-+.+.+.+++..+... ....-. ... ..+.+.++.+++.
T Consensus 2 ~v~aPa~i~lgl~v~g~~~d---~y~~~~~~~~~i~~~~~~~i~~~~~~~--~~~~~~---~~~---n~v~~~~~~l~~~ 70 (148)
T 1uek_A 2 ERLAPAKVNLGLSVRFRRED---GYHELHTLFAPFSLADRLVVEPVSSGL--HFQGPY---GRE---NLAYRAASLYLEA 70 (148)
T ss_dssp EEEEEEEEEEEEEEEEECTT---SSEEEEEEEEEEEEEEEEEEEEESSCE--EEESTT---GGG---SHHHHHHHHHHHH
T ss_pred CEECCCEECCCEEECCCCCC---CCCEEEEEEEEECCCEEEEEEECCCCC--EECCCC---CCC---CHHHHHHHHHHHC
T ss_conf 65205207114042786999---963225899991783699999868995--787888---743---1235876334440
Q ss_pred CCC--EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCHH-CCCC
Q ss_conf 194--3999985023321101232247999999999981889998899988652135303431056200-2578
Q gi|254781016|r 104 SKV--YFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARLGSGSACRSFYRGFCE-WICG 174 (355)
Q Consensus 104 ~~~--~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlGSGSA~RSi~GG~v~-W~~g 174 (355)
.+. .++|..++++|.++||+||||..+|+..|++++++++++.+++. ++.|++-+| +++||++. ++.|
T Consensus 71 ~~~~~~~~i~i~~~IP~g~GLGSssa~~~a~~~al~~~~~~~l~~~ela--~~~~~dv~~-~~~gg~~~~~g~g 141 (148)
T 1uek_A 71 AGQPGGVRILLEKRIPEGAGLGGGSSDAAQVLLALQALYPAEVDLFALA--RTLGADVPF-FLLGRGAEARGVG 141 (148)
T ss_dssp TTCCCEEEEEEECCSCSSSSSCHHHHHHHHHHHHHHHHSCSCCCHHHHH--HHHCTTHHH-HHHCSEEEEETTT
T ss_pred CCCCHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH--HHHHHCCCC-EECCCCCCCCCCC
T ss_conf 4863122457631521012335672289999999865412220577888--764203210-2316411235765
No 23
>>1pie_A Galactokinase; galactose, galactosemia, transferase; HET: GLA; 2.10A {Lactococcus lactis} (A:1-232,A:410-419)
Probab=98.52 E-value=1.7e-06 Score=65.37 Aligned_cols=151 Identities=15% Similarity=0.169 Sum_probs=89.2
Q ss_pred HHHHHCCCCCCCCCEEEECCCCEEEE----ECCCCCCHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCEEE--------
Q ss_conf 88740346787763789748842488----116776701175789843468127810799997178885799--------
Q gi|254781016|r 10 HRYIGECNPKINEKSSAFLPSNIALC----KYWGKRDSKLNLPLNNSLSLSLGHLGTITHITVIDSDADCII-------- 77 (355)
Q Consensus 10 ~~~~~~~~~~~~~~~ta~ap~NIALI----KYWGK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~~~~d~~~-------- 77 (355)
-+|....+ .-....+++||-.|.|. -|+|. +.|++.++ .++...+...++..-++.
T Consensus 36 ~~~~~~~g-~~~~~~~~~aPgki~L~Geh~d~~g~----------~~l~~ai~-~~~~v~~~~~~~~~i~~~~~~~~~~~ 103 (242)
T 1pie_A 36 EKFAEVFG-DTKEVEYFFSPGRINLIGEHTDYNGG----------YVFPASIT-IGTTGLARLREDKKVKLYSENFPKLG 103 (242)
T ss_dssp HHHHHHHS-CCCSCEEEEEEEEEEEECCSCTTTTC----------EEEEEEEE-EEEEEEEEECSSSEEEEEETTCGGGC
T ss_pred HHHHHHHC-CCCCCEEEECCCEEEEECCCEEECCC----------CEEEEEHH-HCEEEEEEECCCCEEEEEECCCCCCE
T ss_conf 99999848-99871699800138996287357897----------16926840-08699999999998999989999860
Q ss_pred ---ECCEECCC-CC-HHHHHHHHHHHHHHHH---CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf ---87872566-52-0689999997421676---1943999985023321101232247999999999981889998899
Q gi|254781016|r 78 ---LNGQKISS-QS-SFFKKTTQFCDLFRQF---SKVYFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESL 149 (355)
Q Consensus 78 ---lnG~~~~~-~~-~~~~ri~~~l~~~r~~---~~~~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~l 149 (355)
.++..... .. ....-+...+..+++. ....+.|...+++|.++||+||||..+|++.|+.+++++.++.+++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~i~i~s~iP~g~GlGSSAA~~va~~~al~~~~~~~ls~~~l 183 (242)
T 1pie_A 104 VIEFDLDEVEKKDGELWSNYVKGMIVMLKGAGYEIDKGFELLIKGEIPTASGLSSSASLELLVGVVLDDLFNLNVPRLEL 183 (242)
T ss_dssp CEEEETTCTTSCCTTCTHHHHHHHHHHHHHTTCCCCSCEEEEEEECSCTTSSSCHHHHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 79960400145665206888999999999838987887699995578866676636888889998999985898767889
Q ss_pred HHHHHHC------CC----CCHHHHCCCCHHCC
Q ss_conf 9886521------35----30343105620025
Q gi|254781016|r 150 SRVARLG------SG----SACRSFYRGFCEWI 172 (355)
Q Consensus 150 S~lARlG------SG----SA~RSi~GG~v~W~ 172 (355)
..+|+.. .. ..+-+++||+....
T Consensus 184 ~~la~~~E~~~~g~~~g~~D~~a~~~Gg~~~~~ 216 (242)
T 1pie_A 184 VQLGQKTENDYIGVNSGILDQFAIGFGEVKKAI 216 (242)
T ss_dssp HHHHHHHHHHTTCCCCCSHHHHHHHHCBTTEEE
T ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEE
T ss_conf 999999998631788763147888507533010
No 24
>>2cz9_A Probable galactokinase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.50A {Pyrococcus horikoshii} PDB: 2dei_A* 2dej_A* 1s4e_A* (A:1-178,A:344-350)
Probab=98.37 E-value=4.6e-06 Score=62.34 Aligned_cols=141 Identities=15% Similarity=0.106 Sum_probs=84.9
Q ss_pred EEEECCCCEEEEECCCCCCHHHCCCCCCCEEEEECCCCEEEEEEECC-------CCCCEEEECCEECCCCCHHHHHHHHH
Q ss_conf 78974884248811677670117578984346812781079999717-------88857998787256652068999999
Q gi|254781016|r 24 SSAFLPSNIALCKYWGKRDSKLNLPLNNSLSLSLGHLGTITHITVID-------SDADCIILNGQKISSQSSFFKKTTQF 96 (355)
Q Consensus 24 ~ta~ap~NIALIKYWGK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~-------~~~d~~~lnG~~~~~~~~~~~ri~~~ 96 (355)
.+++||-.|.|+= .+- ..+--+.|.+.++ .++..+++..+ ...+.......+.........-+..+
T Consensus 2 i~~~aP~ki~l~G---e~~---d~~G~~~l~~ai~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (185)
T 2cz9_A 2 IKVKSPGRVNLIG---EHT---DYTYGYVMPMAIN-LYTKIEAEKHGEVILYSEHFGEERKFSLNDLRKENSWIDYVKGI 74 (185)
T ss_dssp EEEEEEEEEEEEC---TTC---GGGTCEEEEEEEE-EEEEEEEEEESSEEEEETTTTEEEEECTTCCCCCSSTHHHHHHH
T ss_pred EEEECCEEEEEEE---CCE---EECCCEEEEEEEC-CCEEEEEEECCCEEEEECCCCCCEEEECCCCCCCCCHHHHHHHE
T ss_conf 8999389789787---888---6389777814712-51999999889679997778973899753023456466662320
Q ss_pred HHHHHHHCC--CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC--------CC--CCHHHH
Q ss_conf 742167619--439999850233211012322479999999999818899988999886521--------35--303431
Q gi|254781016|r 97 CDLFRQFSK--VYFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARLG--------SG--SACRSF 164 (355)
Q Consensus 97 l~~~r~~~~--~~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlG--------SG--SA~RSi 164 (355)
+..+++... ..+.|....+.|.++||+||||..+|+..|+++++++.++.+++..+++.. +| .-+-++
T Consensus 75 ~~~l~~~~~~~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~~~~l~~~~l~~l~~~~E~~~~g~~~g~~d~~~~~ 154 (185)
T 2cz9_A 75 FWVLKESDYEVGGIKGRVSGNLPLGAGLSSSASFEVGILETLDKLYNLKLDSLSKVLLAKKAENEFVGVPCGILDQFAVV 154 (185)
T ss_dssp HHHHHHTTCCCCEEEEEEECSCCTTSSSCHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTTCCCCCSHHHHHHH
T ss_pred EEHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf 10134317867884788506634677545520246499999999727677748899999999898719974221456764
Q ss_pred CCCCHHC
Q ss_conf 0562002
Q gi|254781016|r 165 YRGFCEW 171 (355)
Q Consensus 165 ~GG~v~W 171 (355)
|||...-
T Consensus 155 ~gg~~~~ 161 (185)
T 2cz9_A 155 FGREGNV 161 (185)
T ss_dssp HCCTTEE
T ss_pred CCCCCEE
T ss_conf 0667779
No 25
>>3k17_A LIN0012 protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics, NEW YORK SGX research center for structural genomics; HET: PGE; 2.10A {Listeria innocua} (A:1-210,A:351-365)
Probab=98.33 E-value=7.8e-06 Score=60.71 Aligned_cols=145 Identities=14% Similarity=0.143 Sum_probs=90.8
Q ss_pred CCCEEEECCCCEEEEECCCCCCHHHCCC-CCCCEEEEECCCCEEEEEEECCCCCCEEEECCEE-------------CCCC
Q ss_conf 7637897488424881167767011757-8984346812781079999717888579987872-------------5665
Q gi|254781016|r 21 NEKSSAFLPSNIALCKYWGKRDSKLNLP-LNNSLSLSLGHLGTITHITVIDSDADCIILNGQK-------------ISSQ 86 (355)
Q Consensus 21 ~~~~ta~ap~NIALIKYWGK~d~~l~lP-~n~SiS~TL~~~~T~T~v~~~~~~~d~~~lnG~~-------------~~~~ 86 (355)
....+++||--+=|+ |.+ ..++ --+.|++.+| .++..++ .+....++.+-... ...+
T Consensus 4 ~~~i~~~aPgkv~L~---Geh---~d~~~G~~~l~~ai~-~~~~i~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 74 (225)
T 3k17_A 4 KNKLQVKIPGKLYVA---GEY---AVVESGHTAILTAVN-RYITLTL--EDSERNELWIPHYENPVSWPIGGELKPDGEH 74 (225)
T ss_dssp -CCEEEEEEEEEEEE---CTT---GGGSTTCEEEEEEEE-EEEEEEE--EECSSCEEECTTCSSCBCCCTTSCCCCSCGG
T ss_pred CCEEEEEEEEEEEEE---ECC---EEECCCCEEEEEEEC-CEEEEEE--EECCCCEEEEEECCCCEEEEECCCCCCCCCC
T ss_conf 886999996389999---988---983499269999971-5599999--9999985999865887279853555676652
Q ss_pred CHHHHHHH-HHHHHHHH----HCC--CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC---
Q ss_conf 20689999-99742167----619--439999850233211012322479999999999818899988999886521---
Q gi|254781016|r 87 SSFFKKTT-QFCDLFRQ----FSK--VYFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARLG--- 156 (355)
Q Consensus 87 ~~~~~ri~-~~l~~~r~----~~~--~~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlG--- 156 (355)
........ .+...++. ..+ ..+.|....++|.++||+||||..+|++.|++++++.+++.+++-.+|..+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~i~s~iP~g~GLGSSAa~~va~~~al~~l~~~~l~~~~l~~la~~~E~~ 154 (225)
T 3k17_A 75 WTFTAEAINIATTFLKSEGIELTPVKXVIETELIDQSGAKYGLGSSAAATVAVINALXTKFYPEISXLKKFKLAALSHLV 154 (225)
T ss_dssp GHHHHHHHHHHHHHHHHTTCCCCCEEEEEEESSBCTTSCBCSSCHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf 06899999999999998089888952789721246566575545378899999999998434335699999999999877
Q ss_pred -----CC-CCHHHHCCCCHHCCCC
Q ss_conf -----35-3034310562002578
Q gi|254781016|r 157 -----SG-SACRSFYRGFCEWICG 174 (355)
Q Consensus 157 -----SG-SA~RSi~GG~v~W~~g 174 (355)
|| ..+-++|||++.-..+
T Consensus 155 ~~g~~sG~D~~~~~~Gg~~~~~~~ 178 (225)
T 3k17_A 155 VQGNGSCGDIASCXYGGWIAYTTF 178 (225)
T ss_dssp HHSSCCSHHHHHHHHCSEEEEECC
T ss_pred HHHCCCCCHHHHHHCCCEEEEECC
T ss_conf 510887301889974986999428
No 26
>>1wuu_A Galactokinase; galactosemia, GHMP superfamily, transferase; HET: GLA ANP; 2.50A {Homo sapiens} (A:1-222,A:390-399)
Probab=98.19 E-value=2.5e-05 Score=57.20 Aligned_cols=152 Identities=13% Similarity=0.023 Sum_probs=86.6
Q ss_pred CCCCEEEECCCCEEEEECCCCCC--HHHCCCCCCCEEEEECCC-CEEEEEEECCC---CC--CEEEECCEECCCC---CH
Q ss_conf 77637897488424881167767--011757898434681278-10799997178---88--5799878725665---20
Q gi|254781016|r 20 INEKSSAFLPSNIALCKYWGKRD--SKLNLPLNNSLSLSLGHL-GTITHITVIDS---DA--DCIILNGQKISSQ---SS 88 (355)
Q Consensus 20 ~~~~~ta~ap~NIALIKYWGK~d--~~l~lP~n~SiS~TL~~~-~T~T~v~~~~~---~~--d~~~lnG~~~~~~---~~ 88 (355)
.....+++||-.|.|+==|-=.. ..+..+.+-...+++... .....+..... .. ..+.++....... ..
T Consensus 33 ~~~~v~~~aPgki~L~Geh~d~~g~~~l~~ai~~~~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (232)
T 1wuu_A 33 AEPELAVSAPGRVNLIGEHTDYNQGLVLPXALELXTVLVGSPRKDGLVSLLTTSEGADEPQRLQFPLPTAQRSLEPGTPR 112 (232)
T ss_dssp SCCSEEEEEEEEEEEECTTCGGGTCEEEEEEEEEEEEEEEEEETTCEEEEEECCSSSCSCSEEEEECCCSSCCCCCCSSG
T ss_pred CCCCEEEECCEEEEEEECCHHCCCCEEEEEEHHHCEEEEEEECCCCEEEEEECCCCCCCCEEEEEECCHHHCCCCCCCCC
T ss_conf 99979999163999970863248977441356006899999989996999987788876417872043011014657630
Q ss_pred HHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC------CCC--
Q ss_conf 689999997421676194399998502332110123224799999999998188999889998865213------530--
Q gi|254781016|r 89 FFKKTTQFCDLFRQFSKVYFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARLGS------GSA-- 160 (355)
Q Consensus 89 ~~~ri~~~l~~~r~~~~~~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlGS------GSA-- 160 (355)
....+..+++.+.......+.|....++|.++||+||||..+|++.|++++++++++.+++..+|+.+- .|+
T Consensus 113 ~~~~~~~~~~~~~~~~~~g~~i~i~s~iP~g~GLGSSAA~~vA~~~al~~l~~~~ls~~~l~~~a~~~E~~~~g~~sG~~ 192 (232)
T 1wuu_A 113 WANYVKGVIQYYPAAPLPGFSAVVVSSVPLGGGLSSSASLEVATYTFLQQLCPDSGTIAARAQVCQQAEHSFAGXPCGIX 192 (232)
T ss_dssp GGHHHHHHHHHCSSSCCCEEEEEEEECSCTTSSSCHHHHHHHHHHHHHHHHSCCCSCHHHHHHHHHHHHHHHTCCCCCSH
T ss_pred HHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 45677789998600446672356316632345546620788999999998740367487887999998887518766743
Q ss_pred --HHHHCCCCHHC
Q ss_conf --34310562002
Q gi|254781016|r 161 --CRSFYRGFCEW 171 (355)
Q Consensus 161 --~RSi~GG~v~W 171 (355)
.=+++||...-
T Consensus 193 D~~a~~~gg~~~l 205 (232)
T 1wuu_A 193 DQFISLXGQKGHA 205 (232)
T ss_dssp HHHHHHHCCTTEE
T ss_pred HHHHHEECCCCEE
T ss_conf 0021000247617
No 27
>>1kvk_A MK, mevalonate kinase; RMK, ATP, GHMP, transferase; HET: ATP; 2.40A {Rattus norvegicus} (A:1-227,A:375-395)
Probab=97.90 E-value=0.00028 Score=49.85 Aligned_cols=68 Identities=26% Similarity=0.283 Sum_probs=54.5
Q ss_pred EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH---------------HHHHHHHHH------C--CC-CCHH
Q ss_conf 3999985023321101232247999999999981889998---------------899988652------1--35-3034
Q gi|254781016|r 107 YFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKS---------------ESLSRVARL------G--SG-SACR 162 (355)
Q Consensus 107 ~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~---------------~~lS~lARl------G--SG-SA~R 162 (355)
.+.|....++|.++||+||||.-.|++.|+.++++++++. +++..+|.. | || --+=
T Consensus 128 g~~i~i~s~iP~gsGLGSSAA~~va~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~la~~aE~~~~g~~sG~D~~~ 207 (248)
T 1kvk_A 128 SLDIMVWSELPPGAGLGSSAAYSVCVAAALLTACEEVTNPLKDRGSIGSWPEEDLKSINKWAYEGERVIHGNPSGVDNSV 207 (248)
T ss_dssp CEEEEEEESSCTTSSSCHHHHHHHHHHHHHHHHTTSSCCGGGGCCSEECCCHHHHHHHHHHHHHHHHHHHSSCCSHHHHH
T ss_pred CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHH
T ss_conf 73999976577546864008999999999999846545531001110000105799999999999998668885330677
Q ss_pred HHCCCCHHCCCC
Q ss_conf 310562002578
Q gi|254781016|r 163 SFYRGFCEWICG 174 (355)
Q Consensus 163 Si~GG~v~W~~g 174 (355)
++|||.+.-..+
T Consensus 208 ~~~Gg~~~~~~~ 219 (248)
T 1kvk_A 208 STWGGALRYQQG 219 (248)
T ss_dssp HHHCSEEEESSS
T ss_pred HHCCCCEEECCC
T ss_conf 746870010024
No 28
>>2oi2_A Mevalonate kinase; enzyme-inhibitor complex, transferase; HET: DP6; 2.50A {Streptococcus pneumoniae} (A:160-292)
Probab=97.35 E-value=0.016 Score=37.58 Aligned_cols=119 Identities=13% Similarity=0.055 Sum_probs=82.2
Q ss_pred EEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
Q ss_conf 89997287667521056798876185689999730550999999998099999999999999989998703899568657
Q gi|254781016|r 197 GLLKIIDREKKIGSREAMEITRHHSPFFTQWTQQISTDLAHIKQAIIDQDFIKLGEVAEKNALKMHATMIAASPPLLYWQ 276 (355)
Q Consensus 197 ~i~iv~~~~K~vsSt~gm~~~v~tSp~y~~r~~~~~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~~~s~P~~~Y~~ 276 (355)
-+++++++.. .++.+......+...-+...++...+...++.+|+..+|++.|++++..+-..+-++..++
T Consensus 4 ~l~l~~tg~~-~~T~~~v~~v~~~~~~~~~~~~~i~~~~~~~~~al~~~d~~~lg~ll~~~~~~l~~l~vs~-------- 74 (133)
T 2oi2_A 4 YLVIADTGVY-GHTREAIQVVQNKGKDALPFLHALGELTQQAEIAISQKDAEGLGQILSQAHLHLKEIGVSS-------- 74 (133)
T ss_dssp EEEEEECSSC-CCHHHHHHHHHHTGGGGHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCC--------
T ss_pred EEEEEECCCC-CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--------
T ss_conf 6999836866-6337776665420221110221478887777776641146667789998599999747997--------
Q ss_pred HHHHHHHHHHHHHHHCCCEEEEEECCC--CEEEEEECH-HHHHHHHHHHHHCCC
Q ss_conf 889999999999742896199997779--817999558-989999999763210
Q gi|254781016|r 277 KETIQGMERVWDARQQSIPIYFTLDAG--PNLKLLFTH-KIEETIKQFFPEITI 327 (355)
Q Consensus 277 ~~t~~ii~~v~~~R~~g~~v~fT~DAG--PNv~il~~~-~~~~~i~~~l~~i~~ 327 (355)
|+.-+++ ...++.|.-.+....|| ..|.+||+. ++.+.+++.+.+.+.
T Consensus 75 p~l~~l~---~~a~~~G~~g~k~sGAG~GG~vi~l~~~~~~~~~~~~~~~~~~~ 125 (133)
T 2oi2_A 75 LEADSLV---ETALSHGALGAKMSGGGLGGCIIALVTNLTHAQELAERLEEKGA 125 (133)
T ss_dssp HHHHHHH---HHHHTTTCSEEEEESSSSSSEEEEEESCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHH---HHHHHCCCCEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHCCC
T ss_conf 9999999---99997899689994678746699998788999999999997699
No 29
>>2aj4_A Galactokinase; galactosemia, transcription, transferase; HET: GLA ANP; 2.40A {Saccharomyces cerevisiae} (A:1-268,A:539-548)
Probab=97.35 E-value=0.011 Score=38.68 Aligned_cols=70 Identities=20% Similarity=0.226 Sum_probs=56.8
Q ss_pred CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCHHHHHHHHHH--------CCC-CCHHHHCCCCHHCCC
Q ss_conf 43999985023321101232247999999999981---889998899988652--------135-303431056200257
Q gi|254781016|r 106 VYFLIETSNNIPTKAGLASSASGFAALTLALFRIY---SIPEKSESLSRVARL--------GSG-SACRSFYRGFCEWIC 173 (355)
Q Consensus 106 ~~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~---~~~~~~~~lS~lARl--------GSG-SA~RSi~GG~v~W~~ 173 (355)
..+.|....+.|..+||.||||--+|++.|+..++ +...+..++..+++. +|| -.+-+++||.+.+..
T Consensus 172 ~G~~i~i~~~~p~~~GlgSSaa~~~a~~~al~~~~~~~~~~~~~~~l~~l~~~~e~~~~~~~g~~D~~a~~~g~~~~~~~ 251 (278)
T 2aj4_A 172 AGLQVFCEGDVPTGSGLSSSAAFICAVALAVVKANMGPGYHMSKQNLMRITVVAEHYVGVNNGGMDQAASVCGEEDHALY 251 (278)
T ss_dssp CEEEEEEEECSCTTSSSCHHHHHHHHHHHHHHHHHHCTTCCCBHHHHHHHHTTGGGGGTCCCCSHHHHHHHHCCTTCEEE
T ss_pred CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEE
T ss_conf 76599997887888886640689999999999730046887317888998899887517887616777875477776884
Q ss_pred CC
Q ss_conf 89
Q gi|254781016|r 174 GT 175 (355)
Q Consensus 174 g~ 175 (355)
+.
T Consensus 252 ~~ 253 (278)
T 2aj4_A 252 VE 253 (278)
T ss_dssp EE
T ss_pred CC
T ss_conf 14
No 30
>>2cz9_A Probable galactokinase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.50A {Pyrococcus horikoshii} PDB: 2dei_A* 2dej_A* 1s4e_A* (A:179-343)
Probab=96.92 E-value=0.02 Score=36.91 Aligned_cols=98 Identities=12% Similarity=-0.020 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCEEEEEECCC--CEEEE
Q ss_conf 0550999999998099999999999999989998703899568657889999999999742896199997779--81799
Q gi|254781016|r 231 ISTDLAHIKQAIIDQDFIKLGEVAEKNALKMHATMIAASPPLLYWQKETIQGMERVWDARQQSIPIYFTLDAG--PNLKL 308 (355)
Q Consensus 231 ~~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~~~s~P~~~Y~~~~t~~ii~~v~~~R~~g~~v~fT~DAG--PNv~i 308 (355)
...+..++.+|++++|++.||+++..+-..+...+--| .|..-.+ ++-.++.|.-.+-...|| +.|..
T Consensus 64 ~~~~~~~~~~al~~~d~~~lg~lm~~~~~~l~~~~~vs-------~p~ld~l---~~~a~~~Ga~gakltGaG~GG~via 133 (165)
T 2cz9_A 64 ENARVLEVRDALKEGNVEEVGKILTTAHWDLAKNYEVS-------CKELDFF---VERALKLGAYGARLTGAGFGGSAIA 133 (165)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCC-------CHHHHHH---HHHHHHTTCSEEEECSSCSSSEEEE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC-------CHHHHHH---HHHHHHCCCCEEEEECCCCCEEEEE
T ss_conf 60678999987621417788889999999998750668-------7899999---9999976993899505888849999
Q ss_pred EECHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 955898999999976321003688875120
Q gi|254781016|r 309 LFTHKIEETIKQFFPEITIIDPLDSPDLWS 338 (355)
Q Consensus 309 l~~~~~~~~i~~~l~~i~~~~~~~~~~~~~ 338 (355)
||+++..+.+.+.+.+.....-..-|++++
T Consensus 134 l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 163 (165)
T 2cz9_A 134 LVDKEDAETIGEEILREYLKRFPWKARHFI 163 (165)
T ss_dssp EEEGGGHHHHHHHHHHHHHHHCCSCCEEEE
T ss_pred EECHHHHHHHHHHHHHHHHHHCCCCCCEEE
T ss_conf 976257999999999999985499875899
No 31
>>2hfs_A Mevalonate kinase, putative; GHMP kinase, trypanosomatid parasite, transferase; 1.75A {Leishmania major} PDB: 2hfu_A* (A:185-332)
Probab=96.35 E-value=0.098 Score=32.08 Aligned_cols=121 Identities=11% Similarity=0.043 Sum_probs=75.9
Q ss_pred EEEEEEECCCCCCCCCCHHHHHHHHHC----HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 158999728766752105679887618----5689999730550999999998099999999999999989998703899
Q gi|254781016|r 195 RIGLLKIIDREKKIGSREAMEITRHHS----PFFTQWTQQISTDLAHIKQAIIDQDFIKLGEVAEKNALKMHATMIAASP 270 (355)
Q Consensus 195 ~~~i~iv~~~~K~vsSt~gm~~~v~tS----p~y~~r~~~~~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~~~s~P 270 (355)
..-+++++++... ++.+......+.. +.+..=+....+...++..+++++|+..|++++-.+-..|...-.+
T Consensus 3 ~~~lli~~tg~~~-~T~~~v~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~al~~~d~~~lg~lm~~~~~~l~~~~is--- 78 (148)
T 2hfs_A 3 RLYLVVVGTGINA-STAKVVNDVHKXKQQQPVQFKRLYDNYTHIVSQAREALQKGDLQRLGQLXNANHDLCRQIDVS--- 78 (148)
T ss_dssp CEEEEEEECSCCC-CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCC---
T ss_pred CCEEEEEECCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCC---
T ss_conf 5338998489763-248899999888764167776667667678899999864011455678899979999862789---
Q ss_pred CEEEECHHHHHHHHHHHHHHHCCCEEEEEECCC--CEEEEEECH-HHHHHHHHHHHHCCC
Q ss_conf 568657889999999999742896199997779--817999558-989999999763210
Q gi|254781016|r 271 PLLYWQKETIQGMERVWDARQQSIPIYFTLDAG--PNLKLLFTH-KIEETIKQFFPEITI 327 (355)
Q Consensus 271 ~~~Y~~~~t~~ii~~v~~~R~~g~~v~fT~DAG--PNv~il~~~-~~~~~i~~~l~~i~~ 327 (355)
+|..-+++ ...++.|....-...|| ..+..||+. +..+.+.+.+.+...
T Consensus 79 -----~p~ld~l~---~~a~~~ga~gak~sGAGgGG~~ial~~~~~~~~~v~~~l~~~~~ 130 (148)
T 2hfs_A 79 -----CRELESIV---QTCRTYGALGAKLSGTGRGGIAVALAASSDQRDAIVKGLKAKCP 130 (148)
T ss_dssp -----CHHHHHHH---HHHHHTTCSEEEEESSCSSSEEEEEESSHHHHHHHHHHHHHHCT
T ss_pred -----CHHHHHHH---HHHHHCCCCEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHH
T ss_conf -----88999999---99987899389996878745499998788899999999998657
No 32
>>3k17_A LIN0012 protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics, NEW YORK SGX research center for structural genomics; HET: PGE; 2.10A {Listeria innocua} (A:211-350)
Probab=95.87 E-value=0.16 Score=30.55 Aligned_cols=126 Identities=13% Similarity=-0.042 Sum_probs=78.0
Q ss_pred CCCEEEEEEECCCCCCCCCCHHHHHHHHH-----CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 64215899972876675210567988761-----8568999973055099999999809999999999999998999870
Q gi|254781016|r 192 PDLRIGLLKIIDREKKIGSREAMEITRHH-----SPFFTQWTQQISTDLAHIKQAIIDQDFIKLGEVAEKNALKMHATMI 266 (355)
Q Consensus 192 ~dl~~~i~iv~~~~K~vsSt~gm~~~v~t-----Sp~y~~r~~~~~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~~ 266 (355)
|+++ +++++++.+ .||..|...|.. ...+..-++...+-..++.+|+.++|++.|++++..+-..+-++..
T Consensus 1 p~~~--~~l~~tg~~--~~t~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~d~~~~g~l~~~~~~~l~~l~~ 76 (140)
T 3k17_A 1 PVPT--FSVGWTGTP--VSTGKLVSQIHAFKQEDSKNYQHFLTRNNEIXKQIIQAFHTKDEELLYSSIKENRRILQELGT 76 (140)
T ss_dssp CSSE--EEEEECSCC--CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH--HEEEECCCC--CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 4433--168326986--445999999998634056999999999866689999877416999999999999999997543
Q ss_pred CCCCCEEEECHHHHHHHHHHHHHHHCCCEEEEEECCC--CEEEEEECHHH-HHHHHHHHHHCCC
Q ss_conf 3899568657889999999999742896199997779--81799955898-9999999763210
Q gi|254781016|r 267 AASPPLLYWQKETIQGMERVWDARQQSIPIYFTLDAG--PNLKLLFTHKI-EETIKQFFPEITI 327 (355)
Q Consensus 267 ~s~P~~~Y~~~~t~~ii~~v~~~R~~g~~v~fT~DAG--PNv~il~~~~~-~~~i~~~l~~i~~ 327 (355)
.+.+.+. +|.--+++ ...++.|..+-.| .|| =.|..||+.+. .+.|.+.+.+-+.
T Consensus 77 ~~~~~is--~~~l~~l~---~~a~~~g~gaki~-GAGgGG~v~al~~~~~~~~~i~~~~~~~g~ 134 (140)
T 3k17_A 77 KAGVNIE--TSLLKELA---DSAENXGGAGKSS-GSGGGDCGIAFSKTKELAEKLVNEWEKLGI 134 (140)
T ss_dssp HHTCCCS--CHHHHHHH---HHHHHTTSEEEEC-TTCSSSEEEEEESSHHHHHHHHHHHHHTTC
T ss_pred HCCCCCC--CHHHHHHH---HHHHHCCCEEEEE-CCCCCCEEEEEECCHHHHHHHHHHHHHCCC
T ss_conf 0387658--89999999---9998679389980-336401899998788999999999998799
No 33
>>1kkh_A Mevalonate kinase; mixed beta sheet, phosphate-binding loop, beta-alpha-beta, transferase; 2.40A {Methanocaldococcus jannaschii} (A:182-317)
Probab=95.31 E-value=0.25 Score=29.19 Aligned_cols=113 Identities=12% Similarity=0.059 Sum_probs=74.2
Q ss_pred EEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECH
Q ss_conf 99972876675210567988761856899997305509999999980999999999999999899987038995686578
Q gi|254781016|r 198 LLKIIDREKKIGSREAMEITRHHSPFFTQWTQQISTDLAHIKQAIIDQDFIKLGEVAEKNALKMHATMIAASPPLLYWQK 277 (355)
Q Consensus 198 i~iv~~~~K~vsSt~gm~~~v~tSp~y~~r~~~~~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~~~s~P~~~Y~~~ 277 (355)
++++.++.. .+|..+..-+...--.... ..+....+.+|+.++||+.|++++-.+-..+..+-.+ +|
T Consensus 13 ~~l~~tg~~--~~t~~~v~~v~~~~~~~~~---~~e~~~~~~~Al~~~d~~~lg~ll~~~~~~l~~l~~s--------~~ 79 (136)
T 1kkh_A 13 LIVYAEKRK--KKTAELVNEVAKIENKDEI---FKEIDKVIDEALKIKNKEDFGKLMTKNHELLKKLNIS--------TP 79 (136)
T ss_dssp EEEEEECCC--SCHHHHHHHHHTCTTHHHH---HHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTTTCC--------CH
T ss_pred HEEECCCCC--CCHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC--------CH
T ss_conf 122006744--4369999999877655689---9999998876664000688999999979999983899--------88
Q ss_pred HHHHHHHHHHHHHHCCCEEEEEECCC--CEEEEEECHHHHHHHHHHHHHCCC
Q ss_conf 89999999999742896199997779--817999558989999999763210
Q gi|254781016|r 278 ETIQGMERVWDARQQSIPIYFTLDAG--PNLKLLFTHKIEETIKQFFPEITI 327 (355)
Q Consensus 278 ~t~~ii~~v~~~R~~g~~v~fT~DAG--PNv~il~~~~~~~~i~~~l~~i~~ 327 (355)
..-++++.. ++.|..+-.| .|| -.|..|++++..+.+.+.+.+...
T Consensus 80 ~l~~l~~~a---~~~g~gaK~s-GAG~GG~~i~l~~~~~~~~~~~~~~~~~~ 127 (136)
T 1kkh_A 80 KLDRIVDIG---NRFGFGAKLT-GAGGGGCVIILVNEEKEKELLKELNKEDV 127 (136)
T ss_dssp HHHHHHHHH---HHHSSEEEEC-SSSSSEEEEEECCGGGHHHHHHHHHTSSC
T ss_pred HHHHHHHHH---HHCCCEEEEC-CCCCCCEEEEEECHHHHHHHHHHHHHCCC
T ss_conf 999999999---8379389982-79863889999881479999999997498
No 34
>>3k85_A D-glycero-D-manno-heptose 1-phosphate kinase; bacteriodes thetaiotaomicron, protein structure initiative II(PSI II), nysgxrc; 2.28A {Bacteroides thetaiotaomicron} (A:188-331)
Probab=94.78 E-value=0.037 Score=35.00 Aligned_cols=121 Identities=8% Similarity=0.026 Sum_probs=73.9
Q ss_pred CEEEEEEECCCCCCCCCCHHHHHHHH-----HCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH-HHC
Q ss_conf 21589997287667521056798876-----185689999730550999999998099999999999999989998-703
Q gi|254781016|r 194 LRIGLLKIIDREKKIGSREAMEITRH-----HSPFFTQWTQQISTDLAHIKQAIIDQDFIKLGEVAEKNALKMHAT-MIA 267 (355)
Q Consensus 194 l~~~i~iv~~~~K~vsSt~gm~~~v~-----tSp~y~~r~~~~~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~-~~~ 267 (355)
+..-.+++.++..... ..+...|. ....|..=.....+...++.+|++.+|++.||+++..+-..+..+ .--
T Consensus 8 l~~~~ll~~Tg~~~~t--~~~l~~v~~~~~~~~~~~~~~~~~~~e~~~~~~~al~~~d~~~lg~lm~~~~~~l~~~~~~v 85 (144)
T 3k85_A 8 LESSXVLYFTGRSRSS--AAIINEQKKNTSEGNQTAIEAXHKIKQSAIDTKLALLKGDVGEFARILGEGWENKKKXAGAI 85 (144)
T ss_dssp HHHTEEEECC-----------------------CCTTHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHTTC-----
T ss_pred HHHCCEEEECCCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 4303325424753307--76667888766430188998887776666777876630269999999999999877641479
Q ss_pred CCCCEEEECHHHHHHHHHH-HHHHHCCCEEEEEECCC--CEEEEEECHHHHHHHHHHHHHCCC
Q ss_conf 8995686578899999999-99742896199997779--817999558989999999763210
Q gi|254781016|r 268 ASPPLLYWQKETIQGMERV-WDARQQSIPIYFTLDAG--PNLKLLFTHKIEETIKQFFPEITI 327 (355)
Q Consensus 268 s~P~~~Y~~~~t~~ii~~v-~~~R~~g~~v~fT~DAG--PNv~il~~~~~~~~i~~~l~~i~~ 327 (355)
+. |. ++.+ .-.++.|...+-...|| -.|..|+++++.+.+.+.+.+.+.
T Consensus 86 s~-------~~----ld~l~~~a~~~ga~gak~tGAGgGG~v~~l~~~~~~~~~~~~~~~~~~ 137 (144)
T 3k85_A 86 TN-------PX----IQEAFDVATGAGAXAGKVSGAGGGGFIXFVVEPTRKEEVVRALNNLNG 137 (144)
T ss_dssp -----------------CCSCTTTTSCCSEEEECCCC---CEEEECCHHHHHHHHHHHHTSSS
T ss_pred CC-------HH----HHHHHHHHHHCCCEEEEEEEECHHHEEEEEECHHHHHHHHHHHHHCCC
T ss_conf 98-------99----999999997689969999730610289999876459999999987798
No 35
>>3hul_A HSK, HK, homoserine kinase; structural genomics, putative homoserine kinase, THRB, amino-acid biosynthesis, ATP-binding, cytoplasm; 2.19A {Listeria monocytogenes} (A:155-283)
Probab=93.88 E-value=0.51 Score=27.06 Aligned_cols=86 Identities=19% Similarity=0.188 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCC-CEEEEEECCCCEEEE
Q ss_conf 3055099999999809999999999999998999870389956865788999999999974289-619999777981799
Q gi|254781016|r 230 QISTDLAHIKQAIIDQDFIKLGEVAEKNALKMHATMIAASPPLLYWQKETIQGMERVWDARQQS-IPIYFTLDAGPNLKL 308 (355)
Q Consensus 230 ~~~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~~~s~P~~~Y~~~~t~~ii~~v~~~R~~g-~~v~fT~DAGPNv~i 308 (355)
....++..+..++.++|++.+++..+.+ +.+ .|+..-..|+-.+++ ..+++.| ..+..| .+||.|+.
T Consensus 32 ~~~~~~~~~~~al~~~d~~~~~~~~~~~-n~l-------e~~~~~~~p~l~~i~---~~~~~~Ga~~~~mS-GSG~tvf~ 99 (129)
T 3hul_A 32 QASSIANVMIAAILRNDMTLAGEMMERD-LWH-------EKYRSQLVPHLAQIR---DVAKNQGAYAACLS-GAGPTVLV 99 (129)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHTCC-CC------------CTTGGGHHHHH---HHHHTTTCCEEEEC-TTSSCEEE
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHH-HHH-------HHHHHHHCHHHHHHH---HHHHHCCCCEEEEE-CHHHCEEE
T ss_conf 5144456777765238899998754102-234-------888987461399999---99983899589996-62160899
Q ss_pred EECHHHHHHHHHHHHHCCC
Q ss_conf 9558989999999763210
Q gi|254781016|r 309 LFTHKIEETIKQFFPEITI 327 (355)
Q Consensus 309 l~~~~~~~~i~~~l~~i~~ 327 (355)
|+..+.++++.+.+.+.+.
T Consensus 100 l~~~~~a~~i~~~l~~~~~ 118 (129)
T 3hul_A 100 FAPRNLANKLQTSLQTLEI 118 (129)
T ss_dssp EECGGGHHHHHHHHHTTCC
T ss_pred EECHHHHHHHHHHHHHCCC
T ss_conf 9779999999999986599
No 36
>>1h72_C HK, homoserine kinase; transferase, threonine biosynthesis; HET: ANP; 1.8A {Methanococcus jannaschii} (C:165-289)
Probab=92.07 E-value=0.96 Score=25.14 Aligned_cols=103 Identities=6% Similarity=0.023 Sum_probs=63.0
Q ss_pred CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHH
Q ss_conf 21056798876185689999730550999999998099999999999999989998703899568657889999999999
Q gi|254781016|r 209 GSREAMEITRHHSPFFTQWTQQISTDLAHIKQAIIDQDFIKLGEVAEKNALKMHATMIAASPPLLYWQKETIQGMERVWD 288 (355)
Q Consensus 209 sSt~gm~~~v~tSp~y~~r~~~~~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~~~s~P~~~Y~~~~t~~ii~~v~~ 288 (355)
.||.-+-..... .+-..-......++..+..++.++|++.++...+.|- .+...-..-. |+ +..+++
T Consensus 13 vST~~a~~~l~~-~~~~~~~~~~~~~~~~l~~al~~~d~~~~~~~~~~d~-~~e~~~~~~~-------P~----~~~~~~ 79 (125)
T 1h72_C 13 INTKEAREILPK-AVGLKDLVNNVGKACGMVYALYNKDKSLFGRYMMSDK-VIEPVRGKLI-------PN----YFKIKE 79 (125)
T ss_dssp CCHHHHHHTSCS-CCCHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTCC-SSHHHHHTTS-------TT----HHHHHH
T ss_pred CCHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH-HHHHHHHHHC-------HH----HHHHHH
T ss_conf 235999998730-0332034430011356666653265788987653026-7999999857-------16----999999
Q ss_pred HHHCC-CEEEEEECCCCEEEEEECHHHHHHHHHHHHHC
Q ss_conf 74289-61999977798179995589899999997632
Q gi|254781016|r 289 ARQQS-IPIYFTLDAGPNLKLLFTHKIEETIKQFFPEI 325 (355)
Q Consensus 289 ~R~~g-~~v~fT~DAGPNv~il~~~~~~~~i~~~l~~i 325 (355)
..+.| ..+..| .+||.|+.||..++...+.+.+.+.
T Consensus 80 ~l~~ga~~~~mS-GSGstvfal~~~~~a~~~~~~l~~~ 116 (125)
T 1h72_C 80 EVKDKVYGITIS-GSGPSIIAFPKEEFIDEVENILRDY 116 (125)
T ss_dssp HHTTTEEEEEEC-TTSSCEEEEECGGGHHHHHHHHHHH
T ss_pred HHHCCCCEEEEC-CCHHHEEEEECHHHHHHHHHHHHHH
T ss_conf 997798269998-8156359998808999999998874
No 37
>>2aj4_A Galactokinase; galactosemia, transcription, transferase; HET: GLA ANP; 2.40A {Saccharomyces cerevisiae} (A:269-287,A:437-538)
Probab=90.05 E-value=0.18 Score=30.26 Aligned_cols=75 Identities=15% Similarity=0.020 Sum_probs=49.2
Q ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCC-EEEEEECCC--CEEEEEECHHH-
Q ss_conf 99998099999999999999989998703899568657889999999999742896-199997779--81799955898-
Q gi|254781016|r 239 KQAIIDQDFIKLGEVAEKNALKMHATMIAASPPLLYWQKETIQGMERVWDARQQSI-PIYFTLDAG--PNLKLLFTHKI- 314 (355)
Q Consensus 239 ~~ai~~~Df~~l~~i~e~dal~mHa~~~~s~P~~~Y~~~~t~~ii~~v~~~R~~g~-~v~fT~DAG--PNv~il~~~~~- 314 (355)
+-|++++||+.||+++..+--.|...+.-| .|+.-.++ +..++.|. .+-.| .|| +.|..|++...
T Consensus 18 ~~AL~~gD~~~lG~lm~~sh~~lr~~~~vS-------~peld~lv---~~A~~~Ga~GaKlt-GaG~GG~viaL~~~~~~ 86 (121)
T 2aj4_A 18 KFTADEDFFKQFGALMNESQASCDKLYECS-------CPEIDKIC---SIALSNGSYGSRLT-GAGWGGCTVHLVPGGPN 86 (121)
T ss_dssp TTCSHHHHHHHHHHHHHHHHHHHHHTTCCC-------CHHHHHHH---HHHHHTTCSEEEEC-TTCSSSEEEEEEEESTT
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHCCC-------CHHHHHHH---HHHHHCCCCEEEEE-CCCCCCEEEEEECCCCH
T ss_conf 204204699999999999899999843499-------89999999---99997799189885-68762079999637306
Q ss_pred --HHHHHHHHHH
Q ss_conf --9999999763
Q gi|254781016|r 315 --EETIKQFFPE 324 (355)
Q Consensus 315 --~~~i~~~l~~ 324 (355)
.+++.+.+.+
T Consensus 87 ~~~~~~~~~~~~ 98 (121)
T 2aj4_A 87 GNIEKVKEALAN 98 (121)
T ss_dssp CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
T ss_conf 579999999999
No 38
>>1pie_A Galactokinase; galactose, galactosemia, transferase; HET: GLA; 2.10A {Lactococcus lactis} (A:233-409)
Probab=87.67 E-value=2.1 Score=22.74 Aligned_cols=105 Identities=10% Similarity=0.046 Sum_probs=63.3
Q ss_pred HHHHHHHH---HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHC-CCEEEE
Q ss_conf 68999973---05509999999980999999999999999899987038995686578899999999997428-961999
Q gi|254781016|r 223 FFTQWTQQ---ISTDLAHIKQAIIDQDFIKLGEVAEKNALKMHATMIAASPPLLYWQKETIQGMERVWDARQQ-SIPIYF 298 (355)
Q Consensus 223 ~y~~r~~~---~~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~~~s~P~~~Y~~~~t~~ii~~v~~~R~~-g~~v~f 298 (355)
....|... -..+..++.+|++++|++.||+++-.+-..|-..+--| +|+.-. .|...++. |---+=
T Consensus 63 ~~~~r~~~~~~e~~rv~~a~~al~~~d~~~lG~lm~~sh~~l~~~~~vS-------~peld~---lv~~a~~~~Ga~GaK 132 (177)
T 1pie_A 63 TLIKRARHAVYENNRTKIAQKAFVAGNLTKFGELLNASHASLKDDYEVT-------GLELDT---LAETAQKQAGVLGAR 132 (177)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTSCCC-------CHHHHH---HHHHHHHSTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC-------CHHHHH---HHHHHHHHCCCEEEE
T ss_conf 8999998650688999999987532778889999999999999975799-------799999---999999848957989
Q ss_pred EECCC--CEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 97779--8179995589899999997632100368887512
Q gi|254781016|r 299 TLDAG--PNLKLLFTHKIEETIKQFFPEITIIDPLDSPDLW 337 (355)
Q Consensus 299 T~DAG--PNv~il~~~~~~~~i~~~l~~i~~~~~~~~~~~~ 337 (355)
-..|| --|..|++++..+.+.+.+.+.....-..-|+.+
T Consensus 133 ltGaG~GGcviaL~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 173 (177)
T 1pie_A 133 MTGAGFGGCAIALVAHDNVSAFRKAVGQVYEEVVGYPASFY 173 (177)
T ss_dssp ECSSCSSSEEEEEEEGGGHHHHHHHHHHHHHHHHSSCCEEE
T ss_pred ECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 70578772899997605899999999999998419997399
No 39
>>1kvk_A MK, mevalonate kinase; RMK, ATP, GHMP, transferase; HET: ATP; 2.40A {Rattus norvegicus} (A:228-374)
Probab=83.44 E-value=3.3 Score=21.37 Aligned_cols=117 Identities=15% Similarity=0.144 Sum_probs=64.5
Q ss_pred CCCEEEEEEECCCCCCCCCCHHHHHHHHH----CH-HHHHHHHHHHHHHHHHH-------HHHHHCCHHHHHHHHHHHHH
Q ss_conf 64215899972876675210567988761----85-68999973055099999-------99980999999999999999
Q gi|254781016|r 192 PDLRIGLLKIIDREKKIGSREAMEITRHH----SP-FFTQWTQQISTDLAHIK-------QAIIDQDFIKLGEVAEKNAL 259 (355)
Q Consensus 192 ~dl~~~i~iv~~~~K~vsSt~gm~~~v~t----Sp-~y~~r~~~~~~~~~~~~-------~ai~~~Df~~l~~i~e~dal 259 (355)
|++. +++++++.+. ||..+..-+.+ .| .+..-.+...+-+.++. .|+..+||..|++++-.+-.
T Consensus 1 P~~~--l~i~~tg~~~--~t~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~al~~~d~~~lg~lm~~~~~ 76 (147)
T 1kvk_A 1 PALQ--ILLTNTKVPR--STKALVAGVRSRLIKFPEIMAPLLTSIDAISLECERVLGEMAAAPVPEQYLVLEELMDMNQH 76 (147)
T ss_dssp CCEE--EEEEECCCCC--CHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHH
T ss_pred CCCC--EEEECCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 6642--4885168763--15899999999998616679999999999999999999987887750328899999997498
Q ss_pred HHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCEEEEEECCC--CEEEEEECHHHHHHHHHHHHH
Q ss_conf 89998703899568657889999999999742896199997779--817999558989999999763
Q gi|254781016|r 260 KMHATMIAASPPLLYWQKETIQGMERVWDARQQSIPIYFTLDAG--PNLKLLFTHKIEETIKQFFPE 324 (355)
Q Consensus 260 ~mHa~~~~s~P~~~Y~~~~t~~ii~~v~~~R~~g~~v~fT~DAG--PNv~il~~~~~~~~i~~~l~~ 324 (355)
.+-.+-.++ |..-++++.. +..|..+-.| .|| =.+..|++++..+.+.+.+.+
T Consensus 77 ~l~~l~is~--------~~~~~lv~~a---~~~g~gaK~~-GaGgGG~~ial~~~~~~~~~~~~l~~ 131 (147)
T 1kvk_A 77 HLNALGVGH--------ASLDQLCQVT---AAHGLHSKLT-GAGGGGCGITLLKPGLERAKVEAAKQ 131 (147)
T ss_dssp HHHHHTCCC--------HHHHHHHHHH---HHTTCEEEEC-SSCSSSEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHCCCCC--------HHHHHHHHHH---HHCCCEEEEE-CCCCCCEEEEEECCCCHHHHHHHHHH
T ss_conf 886469998--------9999999999---8559389984-53776789999778505999999999
No 40
>>1wuu_A Galactokinase; galactosemia, GHMP superfamily, transferase; HET: GLA ANP; 2.50A {Homo sapiens} (A:223-389)
Probab=83.36 E-value=3.4 Score=21.34 Aligned_cols=85 Identities=13% Similarity=0.009 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHH-CCCEEEEEECCCCE--EE
Q ss_conf 0550999999998099999999999999989998703899568657889999999999742-89619999777981--79
Q gi|254781016|r 231 ISTDLAHIKQAIIDQDFIKLGEVAEKNALKMHATMIAASPPLLYWQKETIQGMERVWDARQ-QSIPIYFTLDAGPN--LK 307 (355)
Q Consensus 231 ~~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~~~s~P~~~Y~~~~t~~ii~~v~~~R~-~g~~v~fT~DAGPN--v~ 307 (355)
-..+..++.++++++||+.||+++-.+-..|-.++--| +|+.-.+ |...++ .|.-..=-..||=- |.
T Consensus 69 e~~rv~~a~~al~~~d~~~lg~lm~~s~~~L~~~~~vs-------~peld~l---v~~a~~~~Ga~GaKltGaG~GGcvi 138 (167)
T 1wuu_A 69 EIRRTAQAAAALRRGDYRAFGRLXVESHRSLRDDYEVS-------CPELDQL---VEAALAVPGVYGSRXTGGGFGGCTV 138 (167)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTSCCC-------CHHHHHH---HHHHHTSTTEEEEEECSSCSEEEEE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC-------CHHHHHH---HHHHHHCCCCEEEEECCCCCCEEEE
T ss_conf 45678899987752899999999999999999853799-------7899999---9999861897288880477771899
Q ss_pred EEECHHHHHHHHHHHHHC
Q ss_conf 995589899999997632
Q gi|254781016|r 308 LLFTHKIEETIKQFFPEI 325 (355)
Q Consensus 308 il~~~~~~~~i~~~l~~i 325 (355)
.|++++.++.|.+.+.+.
T Consensus 139 aLv~~~~~~~v~~~~~~~ 156 (167)
T 1wuu_A 139 TLLEASAAPHAXRHIQEH 156 (167)
T ss_dssp EEEEGGGHHHHHHHHHHH
T ss_pred EEECHHHHHHHHHHHHHH
T ss_conf 997726899999999998
No 41
>>2a2c_A N-acetylgalactosamine kinase; galactokinase, , transferase; HET: NG1 ADP; 1.65A {Homo sapiens} PDB: 2a2d_A* (A:239-253,A:374-467)
Probab=77.35 E-value=5.2 Score=20.01 Aligned_cols=74 Identities=12% Similarity=-0.075 Sum_probs=51.2
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCEEEEEECCCC--EEEEEECHHHHHHHHH
Q ss_conf 80999999999999999899987038995686578899999999997428961999977798--1799955898999999
Q gi|254781016|r 243 IDQDFIKLGEVAEKNALKMHATMIAASPPLLYWQKETIQGMERVWDARQQSIPIYFTLDAGP--NLKLLFTHKIEETIKQ 320 (355)
Q Consensus 243 ~~~Df~~l~~i~e~dal~mHa~~~~s~P~~~Y~~~~t~~ii~~v~~~R~~g~~v~fT~DAGP--Nv~il~~~~~~~~i~~ 320 (355)
.++|+++||+++..+-..|...+--| .|+.-. +++..++.|.--.=-..||. -|..|++++..+.+.+
T Consensus 15 ~~~d~~~lG~Lm~esh~slr~~~~vS-------~peld~---lv~~a~~~Ga~GaKltGaG~GGcviaL~~~~~~~~v~~ 84 (109)
T 2a2c_A 15 NENMVQLLGELMNQSHMSCRDMYECS-------CPELDQ---LVDICRKFGAQGSRLTGAGWGGCTVSMVPADKLPSFLA 84 (109)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHTSCCC-------CHHHHH---HHHHHHHTTCSEEEECTTCSSSEEEEEEEGGGHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCC-------CHHHHH---HHHHHHHCCCCEEEECCCCCCEEEEEEECHHHHHHHHH
T ss_conf 40369999999999999998831699-------899999---99999976997888726877528999976678999999
Q ss_pred HHHHCC
Q ss_conf 976321
Q gi|254781016|r 321 FFPEIT 326 (355)
Q Consensus 321 ~l~~i~ 326 (355)
.+.+..
T Consensus 85 ~l~~~y 90 (109)
T 2a2c_A 85 NVHKAY 90 (109)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999999
No 42
>>1uek_A 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase; non-mevalonate pathway, GHMP superfamily; 1.70A {Thermus thermophilus} (A:149-275)
Probab=73.14 E-value=4.6 Score=20.41 Aligned_cols=79 Identities=10% Similarity=-0.038 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEE
Q ss_conf 05509999999980999999999999999899987038995686578899999999997428961999977798179995
Q gi|254781016|r 231 ISTDLAHIKQAIIDQDFIKLGEVAEKNALKMHATMIAASPPLLYWQKETIQGMERVWDARQQSIPIYFTLDAGPNLKLLF 310 (355)
Q Consensus 231 ~~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~~~s~P~~~Y~~~~t~~ii~~v~~~R~~g~~v~fT~DAGPNv~il~ 310 (355)
...++..+..++..+|++.++...|.=..++ .|+-.++. ..+++.|-..+.=-.+||.|+.||
T Consensus 31 ~~~~~~~l~~~~~~~~~~~~~N~le~~~~~~--------------~p~l~~~~---~~l~~~Ga~~~~mSGSGstvf~l~ 93 (127)
T 1uek_A 31 PDLPVEAILEALARGEEPPYWNSLEGPAFRL--------------FPELKEVR---GRMRALGLRGVLMSGSGSAFFGLA 93 (127)
T ss_dssp CCCCHHHHHHHHHHTCCCSCCBTTHHHHHHH--------------CTHHHHHH---HHHHHTTCEEEEECTTSSCEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH--------------HHHHHHHH---HHHHHCCCCEEEEECHHHCEEEEE
T ss_conf 5225788999987520001346468899999--------------99999999---999967998499987412278998
Q ss_pred CH-HHHHHHHHHHHHCC
Q ss_conf 58-98999999976321
Q gi|254781016|r 311 TH-KIEETIKQFFPEIT 326 (355)
Q Consensus 311 ~~-~~~~~i~~~l~~i~ 326 (355)
.. +.++++.+.|.+..
T Consensus 94 ~~~~~a~~~~~~l~~~~ 110 (127)
T 1uek_A 94 EGPDHARRAAEALRAWG 110 (127)
T ss_dssp SSHHHHHHHHHHHTTTS
T ss_pred CCHHHHHHHHHHHHHCC
T ss_conf 99999999999987759
No 43
>>2v8p_A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; nucleotide-binding, isoprene biosynthesis, transferase, ATP-binding, non-mevalonate; HET: CDP ADP; 2.1A {Aquifex aeolicus} PDB: 2v2v_A* 2v2q_A* 2v34_A* 2v2z_A* 2vf3_A* (A:159-271)
Probab=63.60 E-value=8.4 Score=18.54 Aligned_cols=77 Identities=9% Similarity=-0.013 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEE
Q ss_conf 73055099999999809999999999999998999870389956865788999999999974289619999777981799
Q gi|254781016|r 229 QQISTDLAHIKQAIIDQDFIKLGEVAEKNALKMHATMIAASPPLLYWQKETIQGMERVWDARQQSIPIYFTLDAGPNLKL 308 (355)
Q Consensus 229 ~~~~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~~~s~P~~~Y~~~~t~~ii~~v~~~R~~g~~v~fT~DAGPNv~i 308 (355)
.....++..+.+++.++|.+.++.-.|.-..++ .|+--++. ..+++.|..+.-| .+||.|+.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~N~le~~~~~~--------------~P~i~~~~---~~l~~~~~~~~mS-GSGstvf~ 89 (113)
T 2v8p_A 28 FVTPEYAEEKIQRIISGEVEEIENVLGDIAREL--------------YPEINEVY---RFVEYLGFKPFVS-GSGSTVYF 89 (113)
T ss_dssp CCCHHHHHHHHHHHHTTCGGGCCBHHHHHHHHH--------------CHHHHHHH---HHHHHTTCCCEEC-TTSSCEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------CHHHHHHH---HHHHHCCCCEEEE-CCCHHHEE
T ss_conf 345203578899898777899888888899987--------------83999999---9998289988997-72332068
Q ss_pred EECH-HHHHHHHHHHH
Q ss_conf 9558-98999999976
Q gi|254781016|r 309 LFTH-KIEETIKQFFP 323 (355)
Q Consensus 309 l~~~-~~~~~i~~~l~ 323 (355)
||.. +.++.+.+...
T Consensus 90 l~~~~~~a~~~~~~~~ 105 (113)
T 2v8p_A 90 FGGASEELKKAAKMRG 105 (113)
T ss_dssp SSCCCHHHHHHHHHHT
T ss_pred EECCHHHHHHHHHHCC
T ss_conf 9899999999874179
No 44
>>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A (A:)
Probab=48.75 E-value=15 Score=16.76 Aligned_cols=81 Identities=5% Similarity=-0.081 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCEEEEEECCCCEE---E
Q ss_conf 0550999999998099999999999999989998703899568657889999999999742896199997779817---9
Q gi|254781016|r 231 ISTDLAHIKQAIIDQDFIKLGEVAEKNALKMHATMIAASPPLLYWQKETIQGMERVWDARQQSIPIYFTLDAGPNL---K 307 (355)
Q Consensus 231 ~~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~~~s~P~~~Y~~~~t~~ii~~v~~~R~~g~~v~fT~DAGPNv---~ 307 (355)
.++.+.++.++.+++|+++..++-..-.--+........ ...++.+..++ |.. +|+.+ .
T Consensus 221 ~P~~~~~~~~~~~~gd~~~a~~l~~~~~~~~~~~~~~~~----------~~~~K~~l~~~--G~~------~~~~~R~P~ 282 (309)
T 3fkr_A 221 FPDGIRPILEAWREGRHDDAYARYQAWLPLINHENRQSG----------ILTAKALMREG--GVI------ASERPRHPM 282 (309)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTTG----------GGHHHHHHHHT--TSS------SCCCCCTTS
T ss_pred CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC----------HHHHHHHHHHC--CCC------CCCCCCCCC
T ss_conf 318888889999858999999999998999999855678----------99999999976--998------999879999
Q ss_pred EEECHHHHHHHHHHHHHCCCCC
Q ss_conf 9955898999999976321003
Q gi|254781016|r 308 LLFTHKIEETIKQFFPEITIID 329 (355)
Q Consensus 308 il~~~~~~~~i~~~l~~i~~~~ 329 (355)
.-...++.+.+.+.+.+++.+.
T Consensus 283 ~~l~~~~~~~i~~~~~~~~~~~ 304 (309)
T 3fkr_A 283 PELHPDTRAELLAIARRLDPLV 304 (309)
T ss_dssp CCCCHHHHHHHHHHHHHHCCGG
T ss_pred CCCCHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999841999
No 45
>>3h7c_X Agmatine deiminase; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; HET: MSE 211 1PE; 1.50A {Arabidopsis thaliana} PDB: 1vkp_A* 2q3u_A* 3h7k_A* (X:1-91,X:361-383)
Probab=43.13 E-value=17 Score=16.37 Aligned_cols=38 Identities=13% Similarity=0.130 Sum_probs=28.4
Q ss_pred CCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 98179995589899999997632100368887512000
Q gi|254781016|r 303 GPNLKLLFTHKIEETIKQFFPEITIIDPLDSPDLWSTK 340 (355)
Q Consensus 303 GPNv~il~~~~~~~~i~~~l~~i~~~~~~~~~~~~~~~ 340 (355)
+--|.|+|.+++.+.+++.+.+--.++..+..|+|...
T Consensus 57 ~EpV~i~v~~e~~~~ar~~l~~nV~~i~~ptdD~W~~~ 94 (114)
T 3h7c_X 57 FEPVTVCASPAQWENARKQLPEDIRVVEXSXNDSWGGN 94 (114)
T ss_dssp TSCEEEEECGGGHHHHHHHSCTTSEEEECCCSSCCTCC
T ss_pred CCEEEEEECHHHHHHHHHHCCCCCEEEEECCCCHHCCC
T ss_conf 98499997979999999757567589990589878985
No 46
>>3igx_A Transaldolase; TAla, IDP02095, cytoplasm, pentose shunt, transferase, structural genomics; 1.85A {Francisella tularensis subsp} (A:)
Probab=38.00 E-value=25 Score=15.21 Aligned_cols=62 Identities=21% Similarity=0.181 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHH---CCCCCEEEECHHHHHHHHHHHHHHHCCCEEEEEE-----------CCCCEEEEEECHHH
Q ss_conf 99999998999870---3899568657889999999999742896199997-----------77981799955898
Q gi|254781016|r 253 VAEKNALKMHATMI---AASPPLLYWQKETIQGMERVWDARQQSIPIYFTL-----------DAGPNLKLLFTHKI 314 (355)
Q Consensus 253 i~e~dal~mHa~~~---~s~P~~~Y~~~~t~~ii~~v~~~R~~g~~v~fT~-----------DAGPNv~il~~~~~ 314 (355)
-+-.++.+||+++. ...|-+..==|.|++-+..++++.++|+++-.|+ +||+.+.=.|-..-
T Consensus 113 ~~i~~A~~l~~l~~~~~~~~~ni~IKIPaT~~Gi~A~~~L~~~GI~vn~T~vfs~~Qa~~aa~Aga~~ispfvgRi 188 (324)
T 3igx_A 113 TTIDYAKRIIARYESNGIPKDRVLIKIAATWEGIKAAKLLQKEGINCNLTLIFDKAQAKACAEAGVYLVSPFVGRI 188 (324)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEEEECSHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHHHTTCSEEEEBSHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEEEECCHH
T ss_conf 9999999999975750788870799827988899999999986985437775779999999981991898632336
No 47
>>1kwm_A Procarboxypeptidase B; hydrolase; HET: CIT; 1.60A {Homo sapiens} (A:1-98)
Probab=35.19 E-value=28 Score=14.91 Aligned_cols=65 Identities=6% Similarity=0.064 Sum_probs=44.2
Q ss_pred EEECHHHHHHHHHHHHHHHC-CCEEEEE-----ECCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 86578899999999997428-9619999-----77798179995589899999997632100368887512
Q gi|254781016|r 273 LYWQKETIQGMERVWDARQQ-SIPIYFT-----LDAGPNLKLLFTHKIEETIKQFFPEITIIDPLDSPDLW 337 (355)
Q Consensus 273 ~Y~~~~t~~ii~~v~~~R~~-g~~v~fT-----~DAGPNv~il~~~~~~~~i~~~l~~i~~~~~~~~~~~~ 337 (355)
.-+.+.|-+-++.++++.+. +...+-. ...|..|.|+.+++..+.++++|....+-....-.|..
T Consensus 13 ~rv~~~~~~q~~~l~~l~~~~~~dfW~~~s~~~~~~~~~vdi~V~p~~~~~f~~~L~~~~i~y~v~i~dvq 83 (98)
T 1kwm_A 13 FRVNVEDENHINIIRELASTTQIDFWKPDSVTQIKPHSTVDFRVKAEDTVTVENVLKQNELQYKVLISNLR 83 (98)
T ss_dssp EEEEECSHHHHHHHHHHHHHSCEEEEESSSGGGCCSSEEEEEEECGGGHHHHHHHHHHTTCCEEEEESCHH
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCEEEEHHHHH
T ss_conf 99975999999999998640284253576434368998259998889999999999985981598657689
No 48
>>1sr2_A Putative sensor-like histidine kinase YOJN; four-helical bundle, transferase; NMR {Escherichia coli} (A:)
Probab=31.45 E-value=32 Score=14.50 Aligned_cols=34 Identities=18% Similarity=0.422 Sum_probs=30.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 8568999973055099999999809999999999
Q gi|254781016|r 221 SPFFTQWTQQISTDLAHIKQAIIDQDFIKLGEVA 254 (355)
Q Consensus 221 Sp~y~~r~~~~~~~~~~~~~ai~~~Df~~l~~i~ 254 (355)
-.++...+...+.++.++..++.++|+..+..++
T Consensus 34 ~~ll~~f~~~~~~~l~~L~~a~~~~d~~~i~~~a 67 (116)
T 1sr2_A 34 SGYYALFVDTVPDDVKRLYTEAATSDFAALAQTA 67 (116)
T ss_dssp HTTHHHHTTTHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 9999999985199999999999866999999999
No 49
>>2ts1_A Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30A {Geobacillus stearothermophilus} (A:246-419)
Probab=30.46 E-value=33 Score=14.39 Aligned_cols=37 Identities=14% Similarity=0.266 Sum_probs=28.9
Q ss_pred HCH--HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 185--6899997305509999999980999999999999
Q gi|254781016|r 220 HSP--FFTQWTQQISTDLAHIKQAIIDQDFIKLGEVAEK 256 (355)
Q Consensus 220 tSp--~y~~r~~~~~~~~~~~~~ai~~~Df~~l~~i~e~ 256 (355)
||| ||+-|+....+++.+....+..-..+.+.++.+.
T Consensus 1 TSP~~~yq~~~n~~D~~v~~yl~llT~l~~eeI~~l~~~ 39 (174)
T 2ts1_A 1 TSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQE 39 (174)
T ss_dssp SCHHHHHHHHHTCCHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 898999867257879999999998500010001245677
No 50
>>1yle_A Arginine N-succinyltransferase, alpha chain; structural genomics, acyltransferase, arginine metabolism, PSI, protein structure initiative; 1.70A {Pseudomonas aeruginosa} (A:)
Probab=26.58 E-value=30 Score=14.71 Aligned_cols=76 Identities=17% Similarity=0.278 Sum_probs=51.1
Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE---ECHHHHHHHHHH--------HHHHHCCCE--EEE-EECCCCEEE
Q ss_conf 980999999999999999899987038995686---578899999999--------997428961--999-977798179
Q gi|254781016|r 242 IIDQDFIKLGEVAEKNALKMHATMIAASPPLLY---WQKETIQGMERV--------WDARQQSIP--IYF-TLDAGPNLK 307 (355)
Q Consensus 242 i~~~Df~~l~~i~e~dal~mHa~~~~s~P~~~Y---~~~~t~~ii~~v--------~~~R~~g~~--v~f-T~DAGPNv~ 307 (355)
.-.-||.+.-.++-.....+.|-+|-..| +| +.++-.++|-.| +-+.+||.. -|. -|||||.+
T Consensus 186 FF~mdF~eAD~Lsg~~~k~FIaeLMP~~P--IYv~LLp~eAq~vIG~vH~~t~pA~~lLe~EGF~~~~yVDIFDgGP~l- 262 (342)
T 1yle_A 186 FFDLNYIEAEKLSGLKSRTFLAELMPHYP--IYVPLLPDAAQESXGQVHPRAQITFDILXREGFETDNYIDIFDGGPTL- 262 (342)
T ss_dssp TSCCCHHHHHHHHHHC----------CCC--EEGGGSCHHHHHHTTCBCGGGHHHHHHHHHHTCEEEEEECTTTCCEEE-
T ss_pred CCCCCHHHHHHHHCCCCHHHHHHHCCCCC--EEECCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCEE-
T ss_conf 36998678789874776066896498987--640149999999729808477999999998089658952143789548-
Q ss_pred EEECHHHHHHHHHH
Q ss_conf 99558989999999
Q gi|254781016|r 308 LLFTHKIEETIKQF 321 (355)
Q Consensus 308 il~~~~~~~~i~~~ 321 (355)
=|.-++...|++.
T Consensus 263 -ea~~~~irsVr~s 275 (342)
T 1yle_A 263 -HARTSGIRSIAQS 275 (342)
T ss_dssp -EEEGGGCHHHHTC
T ss_pred -EEECCCCHHHHHC
T ss_conf -9982202644538
No 51
>>1jil_A Tyrrs, tyrosyl-tRNA synthetase, tyrosyl-transfer; truncation, structure based inhibitor design, ligase; HET: 485; 2.20A {Staphylococcus aureus} (A:247-420)
Probab=24.45 E-value=42 Score=13.68 Aligned_cols=37 Identities=16% Similarity=0.322 Sum_probs=29.0
Q ss_pred HCH--HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 185--6899997305509999999980999999999999
Q gi|254781016|r 220 HSP--FFTQWTQQISTDLAHIKQAIIDQDFIKLGEVAEK 256 (355)
Q Consensus 220 tSp--~y~~r~~~~~~~~~~~~~ai~~~Df~~l~~i~e~ 256 (355)
||| ||+-|+....+++.+....+..-+.+.+.++.+.
T Consensus 1 TSP~~~yq~~~n~~D~~v~~yl~llT~l~~eeI~~l~~~ 39 (174)
T 1jil_A 1 TSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQS 39 (174)
T ss_dssp SCHHHHHHHHHTCCHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 885999999851789999999998333148889999998
No 52
>>1rdt_E LXXLL motif coactivator, peroxisome proliferator activated receptor gamma; hormone, polymorphism, hormone/growth factor complex; HET: L79 570; 2.40A {Homo sapiens} (E:)
Probab=23.48 E-value=35 Score=14.25 Aligned_cols=16 Identities=44% Similarity=0.548 Sum_probs=13.0
Q ss_pred HHHHHHHHHHCCCCCH
Q ss_conf 8899988652135303
Q gi|254781016|r 146 SESLSRVARLGSGSAC 161 (355)
Q Consensus 146 ~~~lS~lARlGSGSA~ 161 (355)
-+.+|.+-|-||||..
T Consensus 10 hkqlsellrggsgs~~ 25 (26)
T 1rdt_E 10 HKQLSELLRGGSGSXX 25 (26)
T ss_pred HHHHHHHHCCCCCCCC
T ss_conf 8999999707788778
No 53
>>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} (A:1-76,A:288-338)
Probab=21.85 E-value=47 Score=13.33 Aligned_cols=37 Identities=8% Similarity=-0.035 Sum_probs=26.5
Q ss_pred HHHHHHHHHHCCCEEEEEECCCCEEEEEECHHHHHHHH
Q ss_conf 99999997428961999977798179995589899999
Q gi|254781016|r 282 GMERVWDARQQSIPIYFTLDAGPNLKLLFTHKIEETIK 319 (355)
Q Consensus 282 ii~~v~~~R~~g~~v~fT~DAGPNv~il~~~~~~~~i~ 319 (355)
--....++|++| +|+..---|-++.+++..+++..|.
T Consensus 17 P~~~y~~LR~~~-PV~~~~~~g~~~wlVtry~dv~~vl 53 (127)
T 1odo_A 17 HHTEHRTLREGG-PATWVDVLGVQAWSVSDPVLLKQLL 53 (127)
T ss_dssp HHHHHHHHHTTC-SEEEEEETTEEEEEECCHHHHHHHT
T ss_pred HHHHHHHHHHHC-CEEEEECCCEEEEEECCHHHHHHHH
T ss_conf 589999999509-9899972890499988999999997
No 54
>>3iqt_A Signal transduction histidine-protein kinase BARA; histidine phosphotransfer domain, HTP, structural genomics, PSI-2; HET: MSE BTB; 1.40A {Escherichia coli CFT073} (A:)
Probab=21.72 E-value=47 Score=13.32 Aligned_cols=33 Identities=3% Similarity=0.087 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 568999973055099999999809999999999
Q gi|254781016|r 222 PFFTQWTQQISTDLAHIKQAIIDQDFIKLGEVA 254 (355)
Q Consensus 222 p~y~~r~~~~~~~~~~~~~ai~~~Df~~l~~i~ 254 (355)
.+++.-++..+.++..+.+++.++|+..+.+.+
T Consensus 33 ~ll~~f~~~~~~~l~~l~~a~~~~d~~~l~~~a 65 (123)
T 3iqt_A 33 DXLQXLLDFLPEVRNKVEEQLVGENPEGLVDLI 65 (123)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 999999987189999999998866899999999
No 55
>>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831} (A:218-314)
Probab=21.70 E-value=47 Score=13.32 Aligned_cols=87 Identities=7% Similarity=0.011 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCEEEEEECCCCEE--EE
Q ss_conf 0550999999998099999999999999989998703899568657889999999999742896199997779817--99
Q gi|254781016|r 231 ISTDLAHIKQAIIDQDFIKLGEVAEKNALKMHATMIAASPPLLYWQKETIQGMERVWDARQQSIPIYFTLDAGPNL--KL 308 (355)
Q Consensus 231 ~~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~~~s~P~~~Y~~~~t~~ii~~v~~~R~~g~~v~fT~DAGPNv--~i 308 (355)
.++.+.++.++..++|+++.-++-..=.--+.+++.... +.-+.+++.+-.++ |+ ++|+-- .+
T Consensus 2 ~P~~~~~l~~a~~~Gd~e~A~~lq~~l~~l~~~~~~~~~-------~~~v~~~K~al~~~--Gi------~~g~~R~Pl~ 66 (97)
T 3d0c_A 2 FPQKSFALLEALEEGNQEKIWDVWEDVVPFEDLRAKHNN-------GNNVVIIKEAXEQL--GL------RAGVTREPVN 66 (97)
T ss_dssp CHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHH-------TTHHHHHHHHHHHT--TC------CCCCCCTTCC
T ss_pred CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC-------CCCHHHHHHHHHHC--CC------CCCCCCCCCC
T ss_conf 559999999999878999999999998899999998537-------77689999999975--99------9999898999
Q ss_pred EECHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 955898999999976321003688
Q gi|254781016|r 309 LFTHKIEETIKQFFPEITIIDPLD 332 (355)
Q Consensus 309 l~~~~~~~~i~~~l~~i~~~~~~~ 332 (355)
-..+++.+.|.+.|.+++++....
T Consensus 67 ~lt~e~~~~i~~~L~~~~ll~~~~ 90 (97)
T 3d0c_A 67 PLSPNDRLELEELLKSWNTQEVRE 90 (97)
T ss_dssp SCCHHHHHHHHHHHHHHHHHC---
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHC
T ss_conf 999999999999999679878866
No 56
>>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} (A:)
Probab=21.13 E-value=23 Score=15.46 Aligned_cols=36 Identities=8% Similarity=0.085 Sum_probs=18.2
Q ss_pred CCCCCEEEEECCCCE-EEEEEE---C-C-CCCCEEEECCEEC
Q ss_conf 789843468127810-799997---1-7-8885799878725
Q gi|254781016|r 48 PLNNSLSLSLGHLGT-ITHITV---I-D-SDADCIILNGQKI 83 (355)
Q Consensus 48 P~n~SiS~TL~~~~T-~T~v~~---~-~-~~~d~~~lnG~~~ 83 (355)
+--+-+++|.|+.+. ..+-.+ . . .-.-+|+++|...
T Consensus 40 ~~~~~VaLTFDDg~~~~~t~~iL~~L~~~~v~aTFFv~g~~~ 81 (240)
T 1ny1_A 40 TKEKTIYLTFDNGYENGYTPKVLDVLKKHRVTGTFFVTGHFV 81 (240)
T ss_dssp TTSSEEEEEEEESSCCSCHHHHHHHHHHTTCCCEEEECHHHH
T ss_pred CCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECHHH
T ss_conf 999879998868998342899999999759987999833112
No 57
>>2pid_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, protein-substrate complex, ATP- binding, ligase, mitochondrion, nucleotide-binding; HET: YSA; 2.20A {Homo sapiens} (A:1-20,A:270-356)
Probab=20.84 E-value=49 Score=13.20 Aligned_cols=39 Identities=8% Similarity=0.145 Sum_probs=34.5
Q ss_pred HHHCH--HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 76185--6899997305509999999980999999999999
Q gi|254781016|r 218 RHHSP--FFTQWTQQISTDLAHIKQAIIDQDFIKLGEVAEK 256 (355)
Q Consensus 218 v~tSp--~y~~r~~~~~~~~~~~~~ai~~~Df~~l~~i~e~ 256 (355)
--||| +|+-|+..-...+.+....+..-+.+.+.++.+.
T Consensus 19 ~~TsPy~mYqk~mni~D~~v~~yl~llT~l~~eeI~~L~~~ 59 (107)
T 2pid_A 19 GLTSPFELYQFFVRQPDDSVERYLKLFTFLPLPEIDHIMQL 59 (107)
T ss_dssp TSSCHHHHHHHHHTCCHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 74876999999826999899999999657999999999998
No 58
>>2wvr_C DNA replication factor CDT1; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens} PDB: 2klo_A* (C:)
Probab=20.75 E-value=24 Score=15.36 Aligned_cols=37 Identities=8% Similarity=0.100 Sum_probs=20.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf 8568999973055099999999809999999999999
Q gi|254781016|r 221 SPFFTQWTQQISTDLAHIKQAIIDQDFIKLGEVAEKN 257 (355)
Q Consensus 221 Sp~y~~r~~~~~~~~~~~~~ai~~~Df~~l~~i~e~d 257 (355)
..+...|+..+..+=.+++..-++.|++.+.+..|+-
T Consensus 503 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (546)
T 2wvr_C 503 SELLPDWLSLHRIRTDTYVKLDKAADLAHITARLAHQ 539 (546)
T ss_dssp -------------------------------------
T ss_pred HHHCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHH
T ss_conf 9868720699862794589960217999999999999
No 59
>>1jqg_A Carboxypeptidase A; Pro-protein, hydrolase; 2.50A {Helicoverpa armigera} (A:1-91)
Probab=20.55 E-value=50 Score=13.16 Aligned_cols=53 Identities=13% Similarity=0.196 Sum_probs=42.4
Q ss_pred ECHHHHHHHHHHHHHHHC-CCEEEEEECCCCEEEEEECHHHHHHHHHHHHHCCC
Q ss_conf 578899999999997428-96199997779817999558989999999763210
Q gi|254781016|r 275 WQKETIQGMERVWDARQQ-SIPIYFTLDAGPNLKLLFTHKIEETIKQFFPEITI 327 (355)
Q Consensus 275 ~~~~t~~ii~~v~~~R~~-g~~v~fT~DAGPNv~il~~~~~~~~i~~~l~~i~~ 327 (355)
.+|++-+-++.++++.+. +...+-.-..|-.+.|+.+++..+.++++|.+.++
T Consensus 29 v~~~~~~q~~~L~~l~~~~~~dfw~~~~~~~~vdimV~p~~~~~f~~~L~~~~i 82 (91)
T 1jqg_A 29 VDVASMDQVKLVHDFENDLMLDVWSDAVPGRPGKVLVPKFKREIFENFLKQSGV 82 (91)
T ss_dssp EECCSHHHHHHHHHHHHHTTCEEEECCBTTBCEEEEECGGGHHHHHHHHHHHTC
T ss_pred EECCCHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEECHHHHHHHHHHHHHCCC
T ss_conf 864999999999998733271231688899815999798998999999998698
Done!