HHsearch results for GI: 254781016 and protein with PDBid: 3k85_A
>3k85_A D-glycero-D-manno-heptose 1-phosphate kinase; bacteriodes thetaiotaomicron, protein structure initiative II(PSI II), nysgxrc; 2.28A {Bacteroides thetaiotaomicron}
Probab=99.34 E-value=8.4e-11 Score=94.39 Aligned_cols=282 Identities=14% Similarity=0.089 Sum_probs=156.8
Q ss_pred EEEECCCCEEEEE----CCCCCCHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCEEEECC------------EECCCCC
Q ss_conf 7897488424881----16776701175789843468127810799997178885799878------------7256652
Q gi|254781016|r 24 SSAFLPSNIALCK----YWGKRDSKLNLPLNNSLSLSLGHLGTITHITVIDSDADCIILNG------------QKISSQS 87 (355)
Q Consensus 24 ~ta~ap~NIALIK----YWGK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~~~~d~~~lnG------------~~~~~~~ 87 (355)
..++||--|=|+= ||...... --.-|++++| .+|+.+++..++ +.+.++- ......
T Consensus 4 i~~raP~RI~l~G~~tD~~~~~~~~----gG~via~AId-~~~~v~v~~~~~--~~i~i~~~d~~~~~~~~~~~~~~~~- 75 (357)
T 3k85_A 4 VRSKAPLRLGLAGGGSDVSPYSDIY----GGLILNATIN-LYAYCTIEETNS--GRIEINAYDAQCCKSYLSMSQLEID- 75 (357)
T ss_dssp EEEEEEEEEEEECTTTTSTTHHHHT----CEEEEEEEEE-EEEEEEEEECSS--SEEEEEETTTTEEEEEECCSSCCCC-
T ss_pred EEEECCEEEEEECCCCCCCHHHCCC----CCEEEEEEEC-CCEEEEEEECCC--CEEEEEECCCCCEEEEECCCCCCCC-
T ss_conf 9998999789870763681133448----9799999986-818999999999--9699996588851698124312346-
Q ss_pred HHHHHHHHHHHHHHHH---CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC--------
Q ss_conf 0689999997421676---19439999850233211012322479999999999818899988999886521--------
Q gi|254781016|r 88 SFFKKTTQFCDLFRQF---SKVYFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARLG-------- 156 (355)
Q Consensus 88 ~~~~ri~~~l~~~r~~---~~~~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlG-------- 156 (355)
....-+...+..+-.. ....+.|....+.|.++||+||||-..|++.|+.++++.+++..++..+|..+
T Consensus 76 ~~~~~i~~~~~~~~~~~~~~~~g~~i~i~S~iP~gsGLGSSAA~~Va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~g~~ 155 (357)
T 3k85_A 76 GEASLIKGVYNRIIRDYRLEPKSFKITTYNDAPAGSGLGTSSTMVVCILKAFIEWLSLPLGDYETSRLAYEIERKDLGLS 155 (357)
T ss_dssp SSSHHHHHHHHHHHHHTTCCCCCEEEEEEESSCSSSSSCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHTTTCCC
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
T ss_conf 60678999999999972788987599996578688898840688898899988655451153889999998766542898
Q ss_pred CC--CCHHHHCCCCHHCCCCCCCCCCCEEEEE-CCCC---CCCCEEEEEEECCCCCCCCCCHHHH----HHHHHCHHHHH
Q ss_conf 35--3034310562002578987654413101-5666---8642158999728766752105679----88761856899
Q gi|254781016|r 157 SG--SACRSFYRGFCEWICGTDQNGMDSFAVP-FNNQ---WPDLRIGLLKIIDREKKIGSREAME----ITRHHSPFFTQ 226 (355)
Q Consensus 157 SG--SA~RSi~GG~v~W~~g~~~~~sds~a~~-~~~~---~~dl~~~i~iv~~~~K~vsSt~gm~----~~v~tSp~y~~ 226 (355)
+| -.+-+.+||+........ ....+. .... .+.+....+++.++.... |+.... +..+..+.+..
T Consensus 156 ~G~~D~~~~~~GG~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~tg~~~~-s~~~~~~~~~~~~~~~~~~~~ 230 (357)
T 3k85_A 156 GGKQDQYAAAFGGFNYMEFLQN----DLVIVNPLKMKRWIVDELESSMVLYFTGRSRS-SAAIINEQKKNTSEGNQTAIE 230 (357)
T ss_dssp CCSHHHHHHHHCSEEEEEEETT----TEEEEEEECCCHHHHHHHHHTEEEECC----------------------CCTTH
T ss_pred CCCCCCHHHCCCCCCEEEECCC----CCEEECCCCCCHHHHHHHHHCCEEEECCCCCH-HHHHHHHHHHHHHHHHHHHHH
T ss_conf 7765406451676215774058----84377112320445555430332542475330-776667888766430188998
Q ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCEEEEEECCCCE-
Q ss_conf 9973055099999999809999999999999998999870389956865788999999999974289619999777981-
Q gi|254781016|r 227 WTQQISTDLAHIKQAIIDQDFIKLGEVAEKNALKMHATMIAASPPLLYWQKETIQGMERVWDARQQSIPIYFTLDAGPN- 305 (355)
Q Consensus 227 r~~~~~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~~~s~P~~~Y~~~~t~~ii~~v~~~R~~g~~v~fT~DAGPN- 305 (355)
-+........++..++.++|++.|++++..+...+..+. +.+. +|.. -+.+...++.|.-.+--..||.-
T Consensus 231 ~~~~~~~~~~~~~~a~~~~d~~~lg~lm~~~~~~~~~l~----~~vs--~~~l---d~l~~~a~~~Ga~gaKlsGAGgGG 301 (357)
T 3k85_A 231 AMHKIKQSAIDTKLALLKGDVGEFARILGEGWENKKKMA----GAIT--NPMI---QEAFDVATGAGAMAGKVSGAGGGG 301 (357)
T ss_dssp HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHTTC--------------------CCSCTTTTSCCSEEEECCCC---
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC----CCCC--CHHH---HHHHHHHHHCCCEEEEEEEECHHH
T ss_conf 887776666777876630269999999999999877641----4799--8999---999999976899699997306102
Q ss_pred -EEEEECHHHHHHHHHHHHHCCC
Q ss_conf -7999558989999999763210
Q gi|254781016|r 306 -LKLLFTHKIEETIKQFFPEITI 327 (355)
Q Consensus 306 -v~il~~~~~~~~i~~~l~~i~~ 327 (355)
+.+|+++++.+++.+.+.+.+.
T Consensus 302 ~~~~l~~~~~~~~~~~~l~~~~~ 324 (357)
T 3k85_A 302 FIMFVVEPTRKEEVVRALNNLNG 324 (357)
T ss_dssp CEEEECCHHHHHHHHHHHHTSSS
T ss_pred EEEEEECHHHHHHHHHHHHHCCC
T ss_conf 89999876459999999987798