HHsearch results for GI: 254781016 and protein with PDBid: 3lto_A
>3lto_A Mevalonate diphosphate decarboxylase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.27A {Legionella pneumophila}
Probab=100.00 E-value=0 Score=627.82 Aligned_cols=294 Identities=29% Similarity=0.414 Sum_probs=264.5
Q ss_pred CCEEEECCCCEEEEECCCCCCHHHCCCCCCCEEEEECCCCEEEEEEECCCCC---CEEEECCEECCCC-CHHHHHHHHHH
Q ss_conf 6378974884248811677670117578984346812781079999717888---5799878725665-20689999997
Q gi|254781016|r 22 EKSSAFLPSNIALCKYWGKRDSKLNLPLNNSLSLSLGHLGTITHITVIDSDA---DCIILNGQKISSQ-SSFFKKTTQFC 97 (355)
Q Consensus 22 ~~~ta~ap~NIALIKYWGK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~~~~---d~~~lnG~~~~~~-~~~~~ri~~~l 97 (355)
.+.||+||+||||||||||||+++|||+|||||+|||.++|+|+|++.+... |++++||++.... ....+|+..++
T Consensus 1 m~~~a~Ap~NIAliKYWGK~d~~~~lP~n~SiSlTL~~~~T~t~v~~~~~~~~~~d~~~lng~~~~~~~~~~~~r~~~~l 80 (323)
T 3lto_A 1 MHWFAQAPANIALIKYMGKKDENSNLPDNSSLSYTLSNLLSSVKLEKLPTKKDIWEPLTIPGAPEFNLSVEAQKRFIDHL 80 (323)
T ss_dssp CEEEEEEEEEEEEECCTTCBCTTTCCBSSCEEEEEEEEEEEEEEEEECSSSSCEECCBCTTSSBCCCCCSHHHHHHHHHH
T ss_pred CCCEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEECCEECCCCCHHHHHHHHHHH
T ss_conf 98341775446898304756888878999712568069966899998426776421689898353332579999999999
Q ss_pred HHHHHHCCC--EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHC-----CCCCHHHHHHHHHHCCCCCHHHHCCCCHH
Q ss_conf 421676194--39999850233211012322479999999999818-----89998899988652135303431056200
Q gi|254781016|r 98 DLFRQFSKV--YFLIETSNNIPTKAGLASSASGFAALTLALFRIYS-----IPEKSESLSRVARLGSGSACRSFYRGFCE 170 (355)
Q Consensus 98 ~~~r~~~~~--~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~-----~~~~~~~lS~lARlGSGSA~RSi~GG~v~ 170 (355)
+++++..+. +++|+|+|+||+|+||||||||++|++.|++.+++ ...+..++|.+||+||||||||+|||||+
T Consensus 81 ~~i~~~~~~~~~~~I~s~N~~P~aaGLaSSASa~aA~~~aa~~~~~~~~~~~~~~~~~ls~~ar~gSgSaarSi~GG~v~ 160 (323)
T 3lto_A 81 VRLKEYFGYVGGFLIQSSNNFPHSSGLASSASSFAALTKCASIALSELTQKPLPSIDEQAQLSRLGSGSSCRSFYAPWAL 160 (323)
T ss_dssp HHHHHHHTCCCCEEEEEEESSCTTTTCCCHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHTTCGGGGGGGSCSEEE
T ss_pred HHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHCCCEE
T ss_conf 99998679874289999568774312110567999999999999740322320028899999722899745044288068
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf 25789876544131015666864215899972876675210567988761856899997305509999999980999999
Q gi|254781016|r 171 WICGTDQNGMDSFAVPFNNQWPDLRIGLLKIIDREKKIGSREAMEITRHHSPFFTQWTQQISTDLAHIKQAIIDQDFIKL 250 (355)
Q Consensus 171 W~~g~~~~~sds~a~~~~~~~~dl~~~i~iv~~~~K~vsSt~gm~~~v~tSp~y~~r~~~~~~~~~~~~~ai~~~Df~~l 250 (355)
|..+ ..+ ....+|+++.+++++|+..+|+++||+||+ .+.|||||+.|+.+++.++..+++||+++||+.|
T Consensus 161 w~~~----~~~----~~~~~~~~~~~~i~vv~~~~k~vsS~~a~~-~~~tsp~~~~~~~~~~~~~~~~~~Al~~~d~~~l 231 (323)
T 3lto_A 161 WTGD----KVS----AIDLPYKDLLHQVIVISSQEKEIPSRVAHK-LVKTSPFYETRSERAEANLKLLLNAFENKDWTSI 231 (323)
T ss_dssp EETT----EEE----ECCCSCCSCEEEEEECCCCTTCCCHHHHHH-HGGGSTTTTTHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred EECC----CCC----EEECCCCCCCCEEEEECCCCCCCCCHHHHH-HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 5079----875----330576451115999427766677265551-0568976699998717759999999974789999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHH-CCCEEEEEECCCCEEEEEECHHHHHHHHHHHHH
Q ss_conf 99999999989998703899568657889999999999742-896199997779817999558989999999763
Q gi|254781016|r 251 GEVAEKNALKMHATMIAASPPLLYWQKETIQGMERVWDARQ-QSIPIYFTLDAGPNLKLLFTHKIEETIKQFFPE 324 (355)
Q Consensus 251 ~~i~e~dal~mHa~~~~s~P~~~Y~~~~t~~ii~~v~~~R~-~g~~v~fT~DAGPNv~il~~~~~~~~i~~~l~~ 324 (355)
++++|.|+++||++|+++.|||+||+|+|+++|+.|+++|+ .|.++||||||||||+|||++++.+.|++|+.+
T Consensus 232 ~~l~e~d~~~mHa~~~~s~pp~~y~~~~s~~~i~~v~~~r~~~G~~~~~T~DAGPnv~vl~~~~~~~~v~~~~~~ 306 (323)
T 3lto_A 232 YQICWHEFLDMHQLFKTCEKPFSYITDNTLHILSVIEKFWNEKGDGPVVTMDAGPNVHLLYRSDQTDLARQFKSD 306 (323)
T ss_dssp HHHHHHHHHHHHHHHHTSSSCCCSCCHHHHHHHHHHHHHHHHHSCCCEEECCSSSCEEEEECGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHH
T ss_conf 999999999989998705998550182699999999999996699369986788377999754548999999997